Citrus Sinensis ID: 007399
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 605 | 2.2.26 [Sep-21-2011] | |||||||
| Q39033 | 581 | Phosphoinositide phosphol | yes | no | 0.958 | 0.998 | 0.712 | 0.0 | |
| Q9LY51 | 584 | Phosphoinositide phosphol | no | no | 0.953 | 0.988 | 0.668 | 0.0 | |
| Q8GV43 | 613 | Phosphoinositide phosphol | no | no | 0.950 | 0.938 | 0.580 | 0.0 | |
| Q944C1 | 597 | Phosphoinositide phosphol | no | no | 0.957 | 0.969 | 0.566 | 0.0 | |
| Q944C2 | 578 | Phosphoinositide phosphol | no | no | 0.940 | 0.984 | 0.538 | 0.0 | |
| Q39032 | 561 | Phosphoinositide phosphol | no | no | 0.914 | 0.985 | 0.534 | 1e-180 | |
| Q56W08 | 564 | Phosphoinositide phosphol | no | no | 0.910 | 0.976 | 0.520 | 1e-171 | |
| Q9STZ3 | 531 | Phosphoinositide phosphol | no | no | 0.857 | 0.977 | 0.386 | 1e-106 | |
| Q6NMA7 | 531 | Phosphoinositide phosphol | no | no | 0.851 | 0.969 | 0.373 | 6e-97 | |
| Q8N3E9 | 789 | 1-phosphatidylinositol 4, | yes | no | 0.866 | 0.664 | 0.305 | 5e-62 |
| >sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/606 (71%), Positives = 496/606 (81%), Gaps = 26/606 (4%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+VCFCFRRRF ASEAP +K++F++YSENG MTVDHLHRFLI+VQK+DKA++
Sbjct: 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATR 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ+II+S L H R GL+L+AFFKYLFGD NPPL+ VHHDM AP+SHYFI
Sbjct: 61 EDAQSIINSASSLLH-----RNGLHLDAFFKYLFGDNNPPLA-LHKVHHDMDAPISHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG T+T PV L
Sbjct: 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSNKDDIDVLHGMTLTTPVGL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFP 239
IKCL++I+ +AF S+YPVV+TLEDHLTPDLQ+KVAEMVT+ GEILFTP E LKEFP
Sbjct: 175 IKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SP SLKRRIIISTKPPKEY E K+ + Q+GK DEE WG+EVP+ N S
Sbjct: 235 SPNSLKRRIIISTKPPKEYKEGKDVEV----VQKGKDLGDEEVWGREVPSFIQRNKSEA- 289
Query: 300 KDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSE 359
KDD DG D+D++D +DKS+ N P+Y+ LIAIHAGKPKGG+ ECLKVDPDKVRRLSLSE
Sbjct: 290 KDDLDGNDDDDDDDDEDKSKINAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSE 349
Query: 360 QQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEG 419
+QLE A Y IVRFTQ NLLRIYPKG RV SSNYNPL+GWSHGAQMVAFNMQ
Sbjct: 350 EQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQ----- 404
Query: 420 IEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLK 479
G+GRSLWLM GMFRANGGCGY+KKP+ LL++G +++FDPK LP K TL+
Sbjct: 405 ---------GYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLR 455
Query: 480 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFE 539
VTVYMGEGWY+DF HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNWIP+W+E FE
Sbjct: 456 VTVYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFE 515
Query: 540 FPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLL 599
FPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPV EL +GIRA PLH RKGE+YKSVKLL
Sbjct: 516 FPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPVWELSEGIRAFPLHSRKGEKYKSVKLL 575
Query: 600 MHFEFI 605
+ EF+
Sbjct: 576 VKVEFV 581
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. At physiological calcium concentration, the preferred substrate is phosphatidylinositol 4,5-bisphosphate versus phosphatidylinositol.phosphatidylinositol. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 1EC: 1 |
| >sp|Q9LY51|PLCD7_ARATH Phosphoinositide phospholipase C 7 OS=Arabidopsis thaliana GN=PLC7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/612 (66%), Positives = 480/612 (78%), Gaps = 35/612 (5%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+VCFCFRRR+ S AP +K++FD YS+ G MT D L RFLI+VQK+DKA+K
Sbjct: 1 MSKQTYKVCFCFRRRYRHTVSVAPAEIKTLFDNYSDKGLMTTDLLLRFLIDVQKQDKATK 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQ I+++ L H R GL+L+AFFKYLF N PLS V H DM AP+SHYFI
Sbjct: 61 EEAQDIVNASSSLLH-----RNGLHLDAFFKYLFAVTNSPLSSLEV-HQDMDAPLSHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCS++PII AL+KGVRVIELDIWPNS +D +DVLHG T+T+PVEL
Sbjct: 115 YTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSDEDGIDVLHGRTLTSPVEL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239
IKCLR+I+E+AF S+YPVV+TLEDHLTP LQAKVAEMVT GE+LFTP S ECLKEFP
Sbjct: 175 IKCLRAIREHAFDVSDYPVVVTLEDHLTPKLQAKVAEMVTDIFGEMLFTPPSGECLKEFP 234
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SP LK+RI+ISTKPPKEY A ++ + ++G+ D+E WG+EVP+ + S D
Sbjct: 235 SPAFLKKRIMISTKPPKEYKAATDD----DLVKKGRDLGDKEVWGREVPSFIRRDRSV-D 289
Query: 300 KDDFDGGVDNDEEDSDD------KSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVR 353
K+D +G D+D++D DD K + N PEY+ LIAI AGKPKGG+ ECLKVDPDKVR
Sbjct: 290 KNDSNGDDDDDDDDDDDDDDGDDKIKKNAPPEYKHLIAIEAGKPKGGITECLKVDPDKVR 349
Query: 354 RLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNM 413
RLSLSE+QLE A Y IVRFTQRNLLR+YPKG R+ SSNYNPLI WSHGAQMVAFNM
Sbjct: 350 RLSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTRITSSNYNPLIAWSHGAQMVAFNM 409
Query: 414 QEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLP 473
Q G GRSLW+M GMFR NGGCGY+KKP+ LL++ N VFDP+ LP
Sbjct: 410 Q--------------GLGRSLWVMQGMFRGNGGCGYIKKPDLLLKS---NAVFDPEATLP 452
Query: 474 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPS 533
K TL+VT+YMGEGWYYDFPHTHFD YSPPDFY RVGIAGVPADTVMKKTKTLEDNWIP+
Sbjct: 453 VKTTLRVTIYMGEGWYYDFPHTHFDRYSPPDFYTRVGIAGVPADTVMKKTKTLEDNWIPA 512
Query: 534 WNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERY 593
W+E FEFPL+VPELALLRIEVHEYDMSEKDDFGGQ CLPV EL+QGIRAVPL ++ G +
Sbjct: 513 WDEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVPLRNQDGVKC 572
Query: 594 KSVKLLMHFEFI 605
+SVKLL+ EF+
Sbjct: 573 RSVKLLVRLEFV 584
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/618 (58%), Positives = 447/618 (72%), Gaps = 43/618 (6%)
Query: 6 YRVCFCFRRRFHVAASEAPDAVKSMFDQYS-----------------ENGTMTVDHLHRF 48
YR+ + R+F + D V+ F Q++ G M + L F
Sbjct: 19 YRMFKFYNRKFKINEVTPTDDVRDAFCQFAVGGGGGGTDGDSSDGDGSTGVMGAEQLCSF 78
Query: 49 LIEVQKEDKASKEDAQAIIDS-LRELKHLNIFQRRGLNLEAFFKYLF-GDINPPLSPTPV 106
L + + + +AQ +ID +R H+ F R GL+L+ FF +LF D+NPP+ TP
Sbjct: 79 LDD--HGESTTVAEAQRLIDEVIRRRHHVTRFTRHGLDLDDFFNFLFYDDLNPPI--TPH 134
Query: 107 VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNV 166
VH DMTAP+SHYFIYTGHNSYLTGNQL+SDCS+VP+I+ALQ+GVRVIELD+WPNS ++
Sbjct: 135 VHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPVIKALQRGVRVIELDLWPNSTGTDI 194
Query: 167 DVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226
+VLHG T+T PV L+KCL+SI++YAF +S YPV+ITLEDHLTPDLQAKVAEM TQ G++
Sbjct: 195 NVLHGRTLTTPVPLMKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQM 254
Query: 227 LFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKE 286
L+ P S+ L EFPSP SL RIIISTKPPKEYLE++ K+ D+ S DE +E
Sbjct: 255 LYYPESDSLLEFPSPASLLHRIIISTKPPKEYLESRNPIVKQKDNNVSPSSEDETPRTEE 314
Query: 287 VPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346
+ L+S+ DF+ D+D+ED +++ ++ P Y++LI IHAGKPKG +KE +K
Sbjct: 315 IQTLESM----LFDQDFESKSDSDQED--EEASEDQKPAYKRLITIHAGKPKGTVKEEMK 368
Query: 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406
V DKVRRLSLSEQ+L+ + D+VRFTQRNLLRIYPKG R +SSNY PLIGW+HGA
Sbjct: 369 VVVDKVRRLSLSEQELDRTCSSNSQDVVRFTQRNLLRIYPKGTRFNSSNYKPLIGWTHGA 428
Query: 407 QMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVF 466
QM+AFNMQ G+G+SLWLMHGMFRANGGCGYVKKPNFL++ G H+EVF
Sbjct: 429 QMIAFNMQ--------------GYGKSLWLMHGMFRANGGCGYVKKPNFLMKKGFHDEVF 474
Query: 467 DPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTL 526
DP+ KLP K+TLKV VYMG+GW DF HTHFDAYSPPDFY ++ I GVPAD KKTK +
Sbjct: 475 DPRKKLPVKETLKVKVYMGDGWRMDFSHTHFDAYSPPDFYTKMFIVGVPADNAKKKTKII 534
Query: 527 EDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 586
EDNW P W+EEF FPL+VPELALLRIEV EYDMSEKDDFGGQTCLPV+EL+ GIR+VPL+
Sbjct: 535 EDNWYPIWDEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQTCLPVAELRPGIRSVPLY 594
Query: 587 DRKGERYKSVKLLMHFEF 604
D+KGE+ KSV+LLM F F
Sbjct: 595 DKKGEKMKSVRLLMRFIF 612
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q944C1|PLCD4_ARATH Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana GN=PLC4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/611 (56%), Positives = 440/611 (72%), Gaps = 32/611 (5%)
Query: 5 TYRVCFCFRRRFHVAASEAPDAVKSMFDQYSE-NGTMTVDHLHRFLIEVQKEDKASKEDA 63
+Y+ C F R+F + S + V+ +F++Y+E + M+ + L + + E E + S E+A
Sbjct: 9 SYKFCLIFTRKFRMTESGPVEDVRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGETSLEEA 68
Query: 64 QAIIDS-LRELKHLNIFQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIY 121
+ I+D LR H+ F RR L L+ F YLF D+NPP++ VH +M AP+SHYFI+
Sbjct: 69 ERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFIF 126
Query: 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELI 181
TGHNSYLTGNQL+S+CS++PI AL++GVRV+ELD+WP D+V V HG T+T V+L
Sbjct: 127 TGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEVKLG 185
Query: 182 KCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241
KCL SIK AF S+YPV+ITLEDHLTP LQ KVA+M+TQT G++L+ S+ +EFPSP
Sbjct: 186 KCLESIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSQGCQEFPSP 245
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
E LK +I+ISTKPPKEYLEA + KEK+N ++GK S DE+ WGKE +L S + D D
Sbjct: 246 EELKEKILISTKPPKEYLEANDTKEKDN-GEKGKDS-DEDVWGKEPEDLIS---TQSDLD 300
Query: 302 DFDGGVDNDEEDSD-------DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRR 354
V++ +D + D S +APEY++LIAIHAGKPKGGL+ LKVDP+K+RR
Sbjct: 301 KVTSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRR 360
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
LSLSEQ LE AV +YG D++RFTQ+N LRIYPKG R +SSNY P IGW GAQM+AFNMQ
Sbjct: 361 LSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQ 420
Query: 415 EIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA 474
G+GR+LWLM GMFRANGGCGYVKKP+FL+ P+ + F PK
Sbjct: 421 --------------GYGRALWLMEGMFRANGGCGYVKKPDFLMDASPNGQDFYPKDNSSP 466
Query: 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW 534
KKTLKV V MG+GW DF THFD+YSPPDF+ RVGIAG P D VM+KTK D W P W
Sbjct: 467 KKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIW 526
Query: 535 NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYK 594
N+EF FPL+VPELALLR+EVHE+D++EKDDFGGQTCLPVSE++QGIRAVPL +RKG +Y
Sbjct: 527 NKEFTFPLAVPELALLRVEVHEHDVNEKDDFGGQTCLPVSEIRQGIRAVPLFNRKGVKYS 586
Query: 595 SVKLLMHFEFI 605
S +LLM FEF+
Sbjct: 587 STRLLMRFEFV 597
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q944C2|PLCD5_ARATH Phosphoinositide phospholipase C 5 OS=Arabidopsis thaliana GN=PLC5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/604 (53%), Positives = 415/604 (68%), Gaps = 35/604 (5%)
Query: 5 TYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDA 63
+Y++ C + + P V + F +Y+E + MT + L RFL+EVQ E + DA
Sbjct: 7 SYKMGLCCSDKLRMNRGAPPQDVVTAFVEYTEGRSHMTAEQLCRFLVEVQDETEVLVSDA 66
Query: 64 QAIIDSLR-ELKHLNIFQRRGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIY 121
+ II+ + E H+ F R LNL+ FF +LF D +N P+ VH DM +P+SHYFIY
Sbjct: 67 EKIIERITCERHHITKFLRHTLNLDDFFSFLFSDDLNHPIDSK--VHQDMASPLSHYFIY 124
Query: 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELI 181
T HNSYLTGNQ+NS+CSDVP+I+AL++GVR +ELD+WPNS KD++ VLHG T PVEL+
Sbjct: 125 TSHNSYLTGNQINSECSDVPLIKALKRGVRALELDMWPNSTKDDILVLHGWAWTPPVELV 184
Query: 182 KCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241
KCLRSIKE+AF AS YPV++TLEDHLTPDLQAK AEM+ + ++++ P + LKEFPSP
Sbjct: 185 KCLRSIKEHAFYASAYPVILTLEDHLTPDLQAKAAEMMKEIFMDMVYFPEAGGLKEFPSP 244
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
E LK +I+ISTKPPK L +++K+ E+D+ GK S+D A ++ S
Sbjct: 245 EDLKYKIVISTKPPKGSL--RKDKDSESDAS-GKASSDVSADDEKTEEETS--------- 292
Query: 302 DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQ 361
N+E+ D +S + + Y +LI I +G K GLKE L +D VRRLSL EQ+
Sbjct: 293 ----EAKNEEDGFDQESSNLDFLTYSRLITIPSGNAKNGLKEALTIDNGGVRRLSLREQK 348
Query: 362 LENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIE 421
+ A YG ++++FTQ+NLLRIYPK RV+SSNY P GW +GAQMVAFNMQ
Sbjct: 349 FKKATEMYGTEVIKFTQKNLLRIYPKATRVNSSNYRPYNGWMYGAQMVAFNMQ------- 401
Query: 422 VNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVT 481
G+GR+LW+MHGMFR NGGCGYVKKP+F++ EVF+PK KLP KKTLKV
Sbjct: 402 -------GYGRALWMMHGMFRGNGGCGYVKKPDFMMNNNLSGEVFNPKAKLPIKKTLKVK 454
Query: 482 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP 541
VYMG+GW F T F+ +S P+FY RVGI GV D VMKKTK + W P WNEEFEF
Sbjct: 455 VYMGKGWDSGFQRTCFNTWSSPNFYTRVGITGVRGDKVMKKTKKEQKTWEPFWNEEFEFQ 514
Query: 542 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMH 601
L+VPELALLRIEVH+Y+M EKDDF GQTCLPVSEL+QGIR+VPL+DRKGER SV LLM
Sbjct: 515 LTVPELALLRIEVHDYNMPEKDDFSGQTCLPVSELRQGIRSVPLYDRKGERLVSVTLLMR 574
Query: 602 FEFI 605
F F+
Sbjct: 575 FHFL 578
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q39032|PLCD1_ARATH Phosphoinositide phospholipase C 1 OS=Arabidopsis thaliana GN=PLC1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 631 bits (1627), Expect = e-180, Method: Compositional matrix adjust.
Identities = 322/602 (53%), Positives = 399/602 (66%), Gaps = 49/602 (8%)
Query: 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKED 62
K++++VCFC R F V +SE P+ +K++F YS++ M+ D + RF+I+VQ E A D
Sbjct: 2 KESFKVCFCCVRNFKVKSSEPPEEIKNLFHDYSQDDRMSADEMLRFVIQVQGETHA---D 58
Query: 63 AQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYT 122
+ D LKH +F RG++LE F++YL D N PL T V DM P+SHYF+YT
Sbjct: 59 INYVKDIFHRLKHHGVFHPRGIHLEGFYRYLLSDFNSPLPLTREVWQDMNQPLSHYFLYT 118
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
GHNSYLTGNQLNS+ S PI++AL+ GVRVIELD+WPNS +V HGGT+T+ +L K
Sbjct: 119 GHNSYLTGNQLNSNSSIEPIVKALRNGVRVIELDLWPNSSGKEAEVRHGGTLTSREDLQK 178
Query: 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
CL +KE AF S YPVV+TLEDHLTP LQ KVA+MV++T G LF E + FPSPE
Sbjct: 179 CLNVVKENAFQVSAYPVVLTLEDHLTPILQKKVAKMVSKTFGGSLFQCTDETTECFPSPE 238
Query: 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS-ADEEAWGKEVPNLKSLNNSACDKD 301
SLK +I+ISTKPPKEYL+ +Q KGS DE K++ + +
Sbjct: 239 SLKNKILISTKPPKEYLQ----------TQISKGSTTDESTRAKKISDAEEQVQEE---- 284
Query: 302 DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQ 361
+ + A EYR LI+IHAG KGGLK CL DP++V RLS+SEQ
Sbjct: 285 ----------------DEESVAIEYRDLISIHAGNRKGGLKNCLNGDPNRVIRLSMSEQW 328
Query: 362 LENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIE 421
LE T G D+V+FTQRNLLRI+PK R DSSNY+PL+GW HGAQMVAFNMQ
Sbjct: 329 LETLAKTRGPDLVKFTQRNLLRIFPKTTRFDSSNYDPLVGWIHGAQMVAFNMQ------- 381
Query: 422 VNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP-KVKLPAKKTLKV 480
HGR LW+M GMF+ANGGCGYVKKP+ LL GP E+FDP LP K TLKV
Sbjct: 382 -------SHGRYLWMMQGMFKANGGCGYVKKPDVLLSNGPEGEIFDPCSQNLPIKTTLKV 434
Query: 481 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF 540
+Y GEGW DFP HFD YSPPDFYA+VGIAGVP DT +T+ +D W P W++EFEF
Sbjct: 435 KIYTGEGWNMDFPLDHFDRYSPPDFYAKVGIAGVPLDTASYRTEIDKDEWFPIWDKEFEF 494
Query: 541 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 600
PL VPEL+LL I V +YD + ++DF GQTC P+SE++ GIRAV LHDR GE YK V+LLM
Sbjct: 495 PLRVPELSLLCITVKDYDSNTQNDFAGQTCFPLSEVRPGIRAVRLHDRAGEVYKHVRLLM 554
Query: 601 HF 602
F
Sbjct: 555 RF 556
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Required for secondary responses to abscisic acid signals. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q56W08|PLCD3_ARATH Phosphoinositide phospholipase C 3 OS=Arabidopsis thaliana GN=PLC3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 313/601 (52%), Positives = 394/601 (65%), Gaps = 50/601 (8%)
Query: 4 QTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDA 63
++++VCFC R F + P ++K +F+ YS NG M+ D L RF+ EVQ E A +
Sbjct: 3 ESFKVCFCCSRSFKEKTRQPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYV 62
Query: 64 QAIIDSLRELKHLNIFQRRGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYT 122
Q I S+ KH N+F GL +L AF++YLF D N PL + VHHDM AP+SHYF+YT
Sbjct: 63 QDIFHSV---KHHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYT 119
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
GHNSYLTGNQ+NS S PI++AL+KGV+VIELD+WPN + +V HG T+T+ +L K
Sbjct: 120 GHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQK 179
Query: 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
CL +IK+ AF S+YPV+ITLEDHL P LQA+VA+M+T+T +LF SE K FPSPE
Sbjct: 180 CLTAIKDNAFHVSDYPVIITLEDHLPPKLQAQVAKMLTKTYRGMLFRRVSESFKHFPSPE 239
Query: 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDD 302
LK +I+ISTKPPKEYLE+K + + E +W + +
Sbjct: 240 ELKGKILISTKPPKEYLESKTVHTTRTPTVK------ETSWNRVANKIL----------- 282
Query: 303 FDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQL 362
EE D +S EA YR LIAIHA K K+CL DP+K R+S+ EQ L
Sbjct: 283 --------EEYKDMES---EAVGYRDLIAIHAANCKDPSKDCLSDDPEKPIRVSMDEQWL 331
Query: 363 ENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEV 422
+ V T G D+VRFTQRNL+RIYPKG RVDSSNY+P +GW+HGAQMVAFNMQ
Sbjct: 332 DTMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQ-------- 383
Query: 423 NFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTV 482
GHG+ LW+M GMFR NGGCGYVKKP LL + +FDP + P K TLKV +
Sbjct: 384 ------GHGKQLWIMQGMFRGNGGCGYVKKPRILLD---EHTLFDPCKRFPIKTTLKVKI 434
Query: 483 YMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFP 541
Y GEGW DF HTHFD YSPPDF+ ++GIAGVP DTV +T+T D W P W N+EF F
Sbjct: 435 YTGEGWDLDFHHTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQ 494
Query: 542 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMH 601
LSVPELALL +V +YD ++DF GQTCLP+ ELK G+RAV LHDR G+ YK+ +LL+
Sbjct: 495 LSVPELALLWFKVQDYDNDTQNDFAGQTCLPLPELKSGVRAVRLHDRTGKAYKNTRLLVS 554
Query: 602 F 602
F
Sbjct: 555 F 555
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q9STZ3|PLCD8_ARATH Phosphoinositide phospholipase C 8 OS=Arabidopsis thaliana GN=PLC8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/598 (38%), Positives = 319/598 (53%), Gaps = 79/598 (13%)
Query: 14 RRFHVAASEAPDAVKSMFDQ----YSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDS 69
RR+ + +PD + F Y ++ T+ L L ++ED A A+ I
Sbjct: 5 RRWESHPANSPDLILQFFGNEFHGYGDDMPETLRRLTELLGYEKEEDGAGMNAAKKIAAE 64
Query: 70 L-RELKHLNIFQR-RGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNS 126
L R + F+R R L L+ ++LF +NPP+ VHHDM AP+SHYFI+T NS
Sbjct: 65 LNRRKDDIPAFRRLRCLELDQLNEFLFSTKLNPPIGDQ--VHHDMHAPLSHYFIHTSLNS 122
Query: 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186
Y TGN S +PII AL++GVRV+ELD+WP+ + ++ V P++L +CL S
Sbjct: 123 YFTGNVFGK-YSILPIIEALEQGVRVVELDLWPDGR-GSICVRPSWNFEKPLKLQECLDS 180
Query: 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKR 246
IKE+AF YP++IT +D L P+LQ+K +M+ QT +++ L+ FPSP+ L+
Sbjct: 181 IKEHAFTKCTYPLIITFKDGLKPELQSKATQMIQQTFNHMVYHHDPHSLEVFPSPQQLRN 240
Query: 247 RIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGG 306
+I+IS +PPKE L A + DD G
Sbjct: 241 KILISRRPPKELLYAND-------------------------------------DDGKVG 263
Query: 307 VDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAV 366
V N E QH P Y+ L++ H +P+G L+ L +K++R
Sbjct: 264 VRNGVE----IRQHPADPNYQSLVSFHVVEPRGMLQNVLTGKANKIQR-----------P 308
Query: 367 GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426
G Y DI+ FTQ+ LR P+ + + Y P W HGAQ++A + +E +E
Sbjct: 309 GWYETDIISFTQKRFLRTRPQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKE-------- 360
Query: 427 GDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGE 486
LWLM GMFRANGGCGYVKKP+FLL GP VF P V K LKV +YMG+
Sbjct: 361 ------KLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTVNPVVVKILKVKIYMGD 413
Query: 487 GWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE 546
GW DF S PD Y R+ IAGVP D + KT + W P+W EEF FPL+ P+
Sbjct: 414 GWIVDF-KKRIGRLSKPDLYVRISIAGVPHDENIMKTTVKNNEWTPTWGEEFTFPLTYPD 472
Query: 547 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604
LAL+ EV++Y++S D F GQTCLPVSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 473 LALISFEVYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q6NMA7|PLCD9_ARATH Phosphoinositide phospholipase C 9 OS=Arabidopsis thaliana GN=PLC9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (911), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 226/605 (37%), Positives = 323/605 (53%), Gaps = 90/605 (14%)
Query: 12 FRRRFHVAASEAPDAVKSMF-DQYSENGTMTVDHLHRF--LIEVQKEDKASKEDAQAIID 68
R++F + + P V + F ++Y + L F L++ +K++ + +A ID
Sbjct: 4 LRKKFEMKQANQPGRVPNYFRNKYHGYDDDMPNLLPTFIKLLDTEKDEDGAGLNAAEQID 63
Query: 69 SLRELKHLNIFQRRGLN---LEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGH 124
+ + +I + R L L ++LF ++NPP+S V H DM AP+SHYFI+T
Sbjct: 64 RELKSRKCDILKFRNLTILELPHLNEFLFSTELNPPISDQ-VRHRDMNAPLSHYFIHTSL 122
Query: 125 NSYLTGNQLNSDCSDV-PIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKC 183
SY TGN + + PII AL++GVRV+ELD+ P K D + V P+EL +C
Sbjct: 123 KSYFTGNNVFGRLYSIEPIIDALKQGVRVVELDLLPFGK-DGICVRPKWNFEKPLELQEC 181
Query: 184 LRSIKEYAFVASE-YPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFPSP 241
L +IK++AF + YPV+IT++D L PDLQ+KV +M+ QT G++++ + L+EFPSP
Sbjct: 182 LDAIKQHAFTPTRSYPVIITIKDSLKPDLQSKVTQMIDQTFGDMVYHEDPQQSLEEFPSP 241
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
L+ +I+IS +PP + L AK
Sbjct: 242 AELQNKILISRRPPTKLLYAKA-------------------------------------- 263
Query: 302 DFDGGVDND-EEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
+ GV+ + +E S DK+ Y+ ++ HA +P+G L++ L D +
Sbjct: 264 -VENGVELEIQEGSTDKN-------YQSVVGFHAVEPRGMLQKALTDDVQQP-------- 307
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSN-YNPLIGWSHGAQMVAFNMQEIEEG 419
G Y D++ FTQ LR PK + S+ Y P W HGAQM+A + Q+ +E
Sbjct: 308 ------GWYERDVISFTQNKFLRTRPKKRNLLSNPPYKPQRAWMHGAQMIALSRQDDKE- 360
Query: 420 IEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLK 479
LWLM GMFRANGGCGYVKKPNFLL G + VF P KTLK
Sbjct: 361 -------------KLWLMQGMFRANGGCGYVKKPNFLLNAG-SSGVFYPTENPVVVKTLK 406
Query: 480 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFE 539
V +YMG+GW DF S PD Y R+ IAGVP D + T + W P+W EEF
Sbjct: 407 VKIYMGDGWIVDF-KKRIGRLSKPDLYVRISIAGVPHDEKIMNTTVKNNEWKPTWGEEFT 465
Query: 540 FPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLL 599
FPL+ P+LAL+ EV++Y++S D F GQTCLPVSEL +GIRAVPL+D +G+ S LL
Sbjct: 466 FPLTYPDLALISFEVYDYEVSTPDYFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLL 525
Query: 600 MHFEF 604
F++
Sbjct: 526 TRFKW 530
|
The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
| >sp|Q8N3E9|PLCD3_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 OS=Homo sapiens GN=PLCD3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 179/585 (30%), Positives = 277/585 (47%), Gaps = 61/585 (10%)
Query: 27 VKSMFDQYS-ENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
++ +F QYS E+ ++ L FL E Q E+ A+ AQ +I + EL Q +
Sbjct: 256 LEEIFHQYSGEDRVLSAPELLEFL-EDQGEEGATLARAQQLIQTY-ELNE-TAKQHELMT 312
Query: 86 LEAFFKYLFGDINPPLSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR 144
L+ F YL L T V DM P++HYFI + HN+YLT +Q+ S +R
Sbjct: 313 LDGFMMYLLSPEGAALDNTHTCVFQDMNQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVR 372
Query: 145 ALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLE 204
A +G R +ELD W + V + HG T+T+ + +++++++AF S YPV+++LE
Sbjct: 373 AFAQGCRCVELDCWEGPGGEPV-IYHGHTLTSKILFRDVVQAVRDHAFTLSPYPVILSLE 431
Query: 205 DHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAK 262
+H + QA +A + LG++L T S +E PSPE LK R+++ K
Sbjct: 432 NHCGLEQQAAMARHLCTILGDMLVTQALDSPNPEELPSPEQLKGRVLV-----------K 480
Query: 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322
+K S+ G+ +D E ++ + +A + +
Sbjct: 481 GKKLPAARSEDGRALSDREEEEEDDEEEEEEVEAAAQR----------------RLAKQI 524
Query: 323 APEYRKL-IAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNL 381
+PE L + HA + + P +V SLSE++ + + GN VR R L
Sbjct: 525 SPELSALAVYCHATRLRTLHPAPNAPQPCQVS--SLSERKAKKLIREAGNSFVRHNARQL 582
Query: 382 LRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMF 441
R+YP G+R++S+NY+P W+ G Q+VA N Q G E++ L G F
Sbjct: 583 TRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQT--PGYEMD------------LNAGRF 628
Query: 442 RANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDA-Y 500
NG CGYV KP L Q + FDP+ P + TL + V + P + + +
Sbjct: 629 LVNGQCGYVLKPACLRQP---DSTFDPEYPGPPRTTLSIQVLTAQ----QLPKLNAEKPH 681
Query: 501 SPPDFYARVGIAGVPADTVMKKTK-TLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 559
S D R+ I GVPAD ++T L + + P W + +F L PELAL+R V +YD
Sbjct: 682 SIVDPLVRIEIHGVPADCARQETDYVLNNGFNPRWGQTLQFQLRAPELALVRFVVEDYDA 741
Query: 560 SEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604
+ +DF GQ LP+S LKQG R + L + G L +
Sbjct: 742 TSPNDFVGQFTLPLSSLKQGYRHIHLLSKDGASLSPATLFIQIRI 786
|
Hydrolyzes the phosphatidylinositol 4,5-bisphosphate (PIP2) to generate 2 second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). DAG mediates the activation of protein kinase C (PKC), while IP3 releases Ca(2+) from intracellular stores. Essential for trophoblast and placental development. May participate in cytokinesis by hydrolyzing PIP2 at the cleavage furrow. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 4 EC: . EC: 1 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 605 | ||||||
| 225448433 | 593 | PREDICTED: phosphoinositide phospholipas | 0.975 | 0.994 | 0.776 | 0.0 | |
| 255585958 | 594 | 1-phosphatidylinositol-4,5-bisphosphate | 0.975 | 0.993 | 0.770 | 0.0 | |
| 225448435 | 592 | PREDICTED: phosphoinositide phospholipas | 0.973 | 0.994 | 0.776 | 0.0 | |
| 359486403 | 580 | PREDICTED: phosphoinositide phospholipas | 0.958 | 1.0 | 0.771 | 0.0 | |
| 224098612 | 590 | predicted protein [Populus trichocarpa] | 0.971 | 0.996 | 0.754 | 0.0 | |
| 224112503 | 587 | predicted protein [Populus trichocarpa] | 0.970 | 1.0 | 0.748 | 0.0 | |
| 351725699 | 600 | phosphoinositide-specific phospholipase | 0.965 | 0.973 | 0.733 | 0.0 | |
| 351720874 | 600 | phosphatidylinositol-specific phospholip | 0.961 | 0.97 | 0.734 | 0.0 | |
| 116563473 | 588 | phospholipase C [Nicotiana tabacum] | 0.971 | 1.0 | 0.727 | 0.0 | |
| 2853039 | 585 | phosphoinositide-specific phospholipase | 0.966 | 1.0 | 0.723 | 0.0 |
| >gi|225448433|ref|XP_002269949.1| PREDICTED: phosphoinositide phospholipase C 2 isoform 1 [Vitis vinifera] gi|147828132|emb|CAN64084.1| hypothetical protein VITISV_006935 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/608 (77%), Positives = 525/608 (86%), Gaps = 18/608 (2%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF + SEAP +K +FD+YSENG M++DHL RFLIEVQ+E+KA+
Sbjct: 1 MSKQTYRVCFCFRRRFRLTVSEAPQEIKELFDRYSENGMMSIDHLQRFLIEVQQEEKATV 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQAI+DSL E KHLNIF R+ LNLEAFFKYLFGDINPPLS VHHDMTAP+SHYF+
Sbjct: 61 EDAQAILDSLHEFKHLNIFHRKALNLEAFFKYLFGDINPPLSTALGVHHDMTAPLSHYFV 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII ALQ+GVRVIELDIWPNS KDNVDVLHG T+T PVEL
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIHALQRGVRVIELDIWPNSTKDNVDVLHGRTLTTPVEL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF ASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTPG ECL EFPS
Sbjct: 181 IKCLKSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPGPECLNEFPS 240
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK SADEEAWGKEV NLK + A D+
Sbjct: 241 PESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKESADEEAWGKEVSNLKP-STVAVDE 299
Query: 301 D---DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
+ + + D ++ D KSQ N APEY++LIAIHAGK KGGL E L+VDPDKVRRLSL
Sbjct: 300 SNLEEEENIDEEDLDEGDPKSQQNAAPEYKRLIAIHAGKVKGGLTEWLRVDPDKVRRLSL 359
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIE 417
SEQ+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYNP+IGW HGAQMVAFNMQ
Sbjct: 360 SEQELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYNPVIGWMHGAQMVAFNMQ--- 416
Query: 418 EGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKT 477
G+GRSLW+MHGMF+ANGGCGYVKKP+FLL G H+ VFDPK KLP K T
Sbjct: 417 -----------GYGRSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAKLPVKTT 465
Query: 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEE 537
LKVTVYMGEGWY+DF HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW P+W+E
Sbjct: 466 LKVTVYMGEGWYFDFRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWTPNWDEH 525
Query: 538 FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVK 597
FEFPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL RKG++Y SVK
Sbjct: 526 FEFPLTVPELALLRVEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGDKYPSVK 585
Query: 598 LLMHFEFI 605
LLM FEF+
Sbjct: 586 LLMRFEFV 593
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585958|ref|XP_002533650.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative [Ricinus communis] gi|223526463|gb|EEF28738.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 978 bits (2528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/609 (77%), Positives = 530/609 (87%), Gaps = 19/609 (3%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKAS 59
MSKQTYRVCFCFRRRF +A +EAP +KS+FDQYS+N G M++D L RFL+E+QK+D A+
Sbjct: 1 MSKQTYRVCFCFRRRFRLAVAEAPQEIKSLFDQYSDNNGLMSIDQLRRFLVEIQKQDNAT 60
Query: 60 KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYF 119
EDAQAI ++L ELKHLNIF R+GLNLEAFFKYLFGDINPPL VHHDMT P+SHYF
Sbjct: 61 TEDAQAIFNNLHELKHLNIFHRKGLNLEAFFKYLFGDINPPLDVKRGVHHDMTCPLSHYF 120
Query: 120 IYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179
IYTGHNSYLTGNQL+SDCSDVPII+ALQ+GVRVIELDIWPNS KDNV+VLHG T+T PVE
Sbjct: 121 IYTGHNSYLTGNQLSSDCSDVPIIQALQRGVRVIELDIWPNSTKDNVEVLHGRTLTTPVE 180
Query: 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFP 239
LIKCLRSIKE+AF AS+YPVVITLEDHLTPDLQAKVAEM+TQT G+ILFTPGSECLKEFP
Sbjct: 181 LIKCLRSIKEHAFRASDYPVVITLEDHLTPDLQAKVAEMITQTFGDILFTPGSECLKEFP 240
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SPESLK+RII+STKPPKEYLE +E +E+E DSQ GK +DEE WGKE+P+LK + D
Sbjct: 241 SPESLKKRIIVSTKPPKEYLEVREIREREGDSQSGKPGSDEETWGKEIPDLKG-HFRVDD 299
Query: 300 KDDFDGGVDNDEE---DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLS 356
K++ D ++DE+ D D+KSQ N APEY+ LIAIHAGKPKGG++ECLKVDPDKVRRLS
Sbjct: 300 KNELDEDNNDDEDAAPDGDNKSQQNIAPEYKHLIAIHAGKPKGGIEECLKVDPDKVRRLS 359
Query: 357 LSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEI 416
LSEQQLE A T+G +IVRFTQRN+LR+YPKGIRVDSSNYNPLIGW HGAQMVAFNMQ
Sbjct: 360 LSEQQLEKAAETHGKEIVRFTQRNILRVYPKGIRVDSSNYNPLIGWMHGAQMVAFNMQ-- 417
Query: 417 EEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKK 476
GHGRSLWLM GMFRANGGCGYVKKP+FLL++GPH EVFDP+ KLP K
Sbjct: 418 ------------GHGRSLWLMQGMFRANGGCGYVKKPDFLLKSGPHGEVFDPRAKLPVKT 465
Query: 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 536
TLKV VYMGEGWYYDF THFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNWIP WNE
Sbjct: 466 TLKVKVYMGEGWYYDFDRTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWIPVWNE 525
Query: 537 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSV 596
EFEFPL+VPELALLR+EVHEYDMSEKDDFGGQ+CLPVSEL++GIRA+PLHDRKG +Y SV
Sbjct: 526 EFEFPLTVPELALLRVEVHEYDMSEKDDFGGQSCLPVSELRKGIRAIPLHDRKGVKYNSV 585
Query: 597 KLLMHFEFI 605
KLL+ F+F+
Sbjct: 586 KLLVRFDFV 594
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448435|ref|XP_002270230.1| PREDICTED: phosphoinositide phospholipase C 2 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/608 (77%), Positives = 525/608 (86%), Gaps = 19/608 (3%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF + SEAP +K +FD+YSENG M++DHL RFLIEVQ+E+KA+
Sbjct: 1 MSKQTYRVCFCFRRRFRLTVSEAPQEIKELFDRYSENGMMSIDHLQRFLIEVQQEEKATV 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQAI+DSL E KHLNIF R+ LNLEAFFKYLFGDINPPLS V HHDMTAP+SHYF+
Sbjct: 61 EDAQAILDSLHEFKHLNIFHRKALNLEAFFKYLFGDINPPLSLFQV-HHDMTAPLSHYFV 119
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII ALQ+GVRVIELDIWPNS KDNVDVLHG T+T PVEL
Sbjct: 120 YTGHNSYLTGNQLSSDCSDVPIIHALQRGVRVIELDIWPNSTKDNVDVLHGRTLTTPVEL 179
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF ASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTPG ECL EFPS
Sbjct: 180 IKCLKSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPGPECLNEFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK SADEEAWGKEV NLK + A D+
Sbjct: 240 PESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKESADEEAWGKEVSNLKP-STVAVDE 298
Query: 301 D---DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
+ + + D ++ D KSQ N APEY++LIAIHAGK KGGL E L+VDPDKVRRLSL
Sbjct: 299 SNLEEEENIDEEDLDEGDPKSQQNAAPEYKRLIAIHAGKVKGGLTEWLRVDPDKVRRLSL 358
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIE 417
SEQ+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYNP+IGW HGAQMVAFNMQ
Sbjct: 359 SEQELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYNPVIGWMHGAQMVAFNMQ--- 415
Query: 418 EGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKT 477
G+GRSLW+MHGMF+ANGGCGYVKKP+FLL G H+ VFDPK KLP K T
Sbjct: 416 -----------GYGRSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAKLPVKTT 464
Query: 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEE 537
LKVTVYMGEGWY+DF HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW P+W+E
Sbjct: 465 LKVTVYMGEGWYFDFRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWTPNWDEH 524
Query: 538 FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVK 597
FEFPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL RKG++Y SVK
Sbjct: 525 FEFPLTVPELALLRVEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGDKYPSVK 584
Query: 598 LLMHFEFI 605
LLM FEF+
Sbjct: 585 LLMRFEFV 592
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486403|ref|XP_003633437.1| PREDICTED: phosphoinositide phospholipase C 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/605 (77%), Positives = 516/605 (85%), Gaps = 25/605 (4%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF + SEAP +K +FD+YSENG M++DHL RFLIEVQ+E+KA+
Sbjct: 1 MSKQTYRVCFCFRRRFRLTVSEAPQEIKELFDRYSENGMMSIDHLQRFLIEVQQEEKATV 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQAI+DSL E KHLNIF R+ LNLEAFFKYLFGDINPPLS VHHDMTAP+SHYF+
Sbjct: 61 EDAQAILDSLHEFKHLNIFHRKALNLEAFFKYLFGDINPPLSTALGVHHDMTAPLSHYFV 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII ALQ+GVRVIELDIWPNS KDNVDVLHG T+T PVEL
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIHALQRGVRVIELDIWPNSTKDNVDVLHGRTLTTPVEL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF ASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTPG ECL EFPS
Sbjct: 181 IKCLKSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPGPECLNEFPS 240
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK SADEEAWGKE + N
Sbjct: 241 PESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKESADEEAWGKESNLEEEENIDE--- 297
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
D ++ D KSQ N APEY++LIAIHAGK KGGL E L+VDPDKVRRLSLSEQ
Sbjct: 298 --------EDLDEGDPKSQQNAAPEYKRLIAIHAGKVKGGLTEWLRVDPDKVRRLSLSEQ 349
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420
+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYNP+IGW HGAQMVAFNMQ
Sbjct: 350 ELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYNPVIGWMHGAQMVAFNMQ------ 403
Query: 421 EVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKV 480
G+GRSLW+MHGMF+ANGGCGYVKKP+FLL G H+ VFDPK KLP K TLKV
Sbjct: 404 --------GYGRSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAKLPVKTTLKV 455
Query: 481 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF 540
TVYMGEGWY+DF HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW P+W+E FEF
Sbjct: 456 TVYMGEGWYFDFRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWTPNWDEHFEF 515
Query: 541 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 600
PL+VPELALLR+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL RKG++Y SVKLLM
Sbjct: 516 PLTVPELALLRVEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGDKYPSVKLLM 575
Query: 601 HFEFI 605
FEF+
Sbjct: 576 RFEFV 580
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224098612|ref|XP_002311223.1| predicted protein [Populus trichocarpa] gi|222851043|gb|EEE88590.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/607 (75%), Positives = 521/607 (85%), Gaps = 19/607 (3%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVCFCFRRRF +A +E PD +K++FD YSENG MT DH+HRFLIEVQK++KA+
Sbjct: 1 MSKQTYRVCFCFRRRFKLAVAEVPDEIKALFDLYSENGIMTADHIHRFLIEVQKQEKATF 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQ+I++SL KHL++F R+GL+LEAFFKYLFGD NPPL VHHDMTAP+SHYFI
Sbjct: 61 EEAQSIVESL---KHLSLFHRKGLHLEAFFKYLFGDTNPPLDLKLGVHHDMTAPLSHYFI 117
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+S+CSDVPII AL+KGVRVIELDIWPNS D+V+VLHG T+T PV+L
Sbjct: 118 YTGHNSYLTGNQLSSECSDVPIINALKKGVRVIELDIWPNSDNDDVEVLHGRTLTTPVQL 177
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCLRSI E+AF ASE+PVVITLEDHLTPDLQAKVA+MVTQT G+ILFTPGSE LKEFPS
Sbjct: 178 IKCLRSINEHAFTASEFPVVITLEDHLTPDLQAKVAQMVTQTFGDILFTPGSERLKEFPS 237
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS--LNNSAC 298
P+SLKRRIIISTKPPKEYLEAKE K+KE+ Q+G ++DEEAWGKE+P L L +
Sbjct: 238 PDSLKRRIIISTKPPKEYLEAKEIKDKESHYQKGNAASDEEAWGKEIPILNGHILADDKN 297
Query: 299 DKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLS 358
+ D D + D ++ D K QH+ APEY++LIAIHAGKPKGGL ECLKVDPDKVRRLSLS
Sbjct: 298 ESDKDDDDAEEDLDEGDHKLQHDIAPEYKRLIAIHAGKPKGGLDECLKVDPDKVRRLSLS 357
Query: 359 EQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEE 418
EQQLE A T+G +IVRFTQRN+LR+YPKG RV+SSNYNPLIGW HGAQMVAFNMQ
Sbjct: 358 EQQLEKAAETHGKEIVRFTQRNILRVYPKGTRVNSSNYNPLIGWMHGAQMVAFNMQ---- 413
Query: 419 GIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTL 478
G+GRSLWLM GMFRANGGCG+VKKP+FLL++GPH EVFD K KLP +KTL
Sbjct: 414 ----------GYGRSLWLMQGMFRANGGCGFVKKPSFLLKSGPHGEVFDTKAKLPMQKTL 463
Query: 479 KVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEF 538
KV +YMGEGW+YDF HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED+WIP WNEEF
Sbjct: 464 KVKIYMGEGWFYDFQHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDSWIPFWNEEF 523
Query: 539 EFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKL 598
EFPL+VPELALLRIEVHEYDMSEKDDFGGQTCLPV EL++GIRAVPLHDRKGERYK VKL
Sbjct: 524 EFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVWELREGIRAVPLHDRKGERYKCVKL 583
Query: 599 LMHFEFI 605
L+ EF+
Sbjct: 584 LVRLEFV 590
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112503|ref|XP_002316212.1| predicted protein [Populus trichocarpa] gi|222865252|gb|EEF02383.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/605 (74%), Positives = 520/605 (85%), Gaps = 18/605 (2%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTYRVC CF RRF +A +EAP+ ++++F+QYS+NG MT +HLHRFLIEVQK++KA+
Sbjct: 1 MSKQTYRVCLCFSRRFKLAVAEAPEEIRALFNQYSDNGIMTDNHLHRFLIEVQKQEKATL 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQAII+SL KHL IF R+GLNLEAFFKYLFGD NPPL HHDMTAP+SHYFI
Sbjct: 61 EEAQAIIESL---KHLAIFHRKGLNLEAFFKYLFGDNNPPLDLKLGAHHDMTAPISHYFI 117
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII AL+KGVRVIELDIWPNS KD+V+VLHG T+T PV+L
Sbjct: 118 YTGHNSYLTGNQLSSDCSDVPIINALKKGVRVIELDIWPNSDKDDVEVLHGRTLTTPVQL 177
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCLRSIKE+AF ASE+PVVITLEDHLTPDLQ+KV++MVTQT G+ LF+PGSECLKEFPS
Sbjct: 178 IKCLRSIKEHAFTASEFPVVITLEDHLTPDLQSKVSKMVTQTFGDTLFSPGSECLKEFPS 237
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLKRRIIISTKPPKEYLEAKE K+KE+DSQ+G + DEEAWGKE+ NLK ++
Sbjct: 238 PESLKRRIIISTKPPKEYLEAKEIKDKESDSQKGNAAPDEEAWGKEILNLKGADDKNELD 297
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
+D + ++ E D K H+ APEY++LIAI AGKPKGGL+ECLKVDPDK RRLSLSEQ
Sbjct: 298 EDDNDAEEDPGE-GDHKLPHDIAPEYKRLIAIPAGKPKGGLEECLKVDPDKARRLSLSEQ 356
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420
QLENA T+G +IVRFTQRN+LR+YPKGIRV+SSNYNPLIGW HGAQMVAFNMQ
Sbjct: 357 QLENAAETHGKEIVRFTQRNILRVYPKGIRVNSSNYNPLIGWMHGAQMVAFNMQ------ 410
Query: 421 EVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKV 480
G+GRSLW+M GMFRANGGCG+VKKP+FLL++GPH EVFDPK KLP +KTLKV
Sbjct: 411 --------GYGRSLWMMQGMFRANGGCGFVKKPDFLLKSGPHGEVFDPKAKLPVQKTLKV 462
Query: 481 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF 540
+YMGEGWYYDF HTHFDAYSPPDFY RVGIAGVPADT MKKT+TLEDNWIP W+E FEF
Sbjct: 463 KIYMGEGWYYDFHHTHFDAYSPPDFYVRVGIAGVPADTGMKKTRTLEDNWIPVWDEGFEF 522
Query: 541 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 600
PL+VP+LALLRIEVHEYDMSEKDDFGGQTCLPV EL++GIRAVPLHDRKGE+Y SVKLL+
Sbjct: 523 PLTVPDLALLRIEVHEYDMSEKDDFGGQTCLPVRELREGIRAVPLHDRKGEKYNSVKLLV 582
Query: 601 HFEFI 605
EF+
Sbjct: 583 RLEFV 587
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351725699|ref|NP_001235310.1| phosphoinositide-specific phospholipase C P13 [Glycine max] gi|1399305|gb|AAB03258.1| phosphoinositide-specific phospholipase C P13 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/616 (73%), Positives = 513/616 (83%), Gaps = 32/616 (5%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKE 61
SKQTY VCFC+RRRF +A +EAP +K++F++YSEN MT HL RFL++VQ+++KA++E
Sbjct: 3 SKQTYSVCFCWRRRFKLALAEAPSEIKTLFNEYSENELMTPSHLKRFLVDVQRQEKATEE 62
Query: 62 DAQAIIDSLRELKHLNIFQRRG--LNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYF 119
DAQAIIDS R F RRG LNLE FFKYLF D NPPL P+ VHHDMT P+SHYF
Sbjct: 63 DAQAIIDSFRH------FHRRGAGLNLETFFKYLFSDDNPPLLPSHGVHHDMTLPLSHYF 116
Query: 120 IYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179
IYTGHNSYLTGNQL+SDCSDVPII AL+KGVRVIELDIWPN+ KD++DVLHG T+T PVE
Sbjct: 117 IYTGHNSYLTGNQLSSDCSDVPIINALKKGVRVIELDIWPNASKDSIDVLHGRTLTTPVE 176
Query: 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFP 239
LI+CLRSIK++AFVASEYPVVITLEDHLTPDLQAKVAEMVTQT G+ILFTP SE +KEFP
Sbjct: 177 LIRCLRSIKDHAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPNSESVKEFP 236
Query: 240 SPESLKRRIIISTKPPKEYLEAKE---------EKEKENDSQRGKGSADEEAWGKEVPNL 290
SPESLK+RIIISTKPPKEYLEAKE EKEK +DS+ GK S ++EAWGKEVP+L
Sbjct: 237 SPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSEHGKASGEDEAWGKEVPSL 296
Query: 291 KSLNNSACDKDDFDGGVDNDEE-DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDP 349
K ++ D ++++EE D DKS HNEAPEYR LIAIHAGKPKGGL ECLKVDP
Sbjct: 297 KGGTIEDYKDNNVDEDLNDEEEFDESDKSHHNEAPEYRHLIAIHAGKPKGGLVECLKVDP 356
Query: 350 DKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMV 409
+KVRRLSLSEQQLE A YG IVRFTQRN+LR+YPKG R+DSSNYNPLIGW HGAQMV
Sbjct: 357 EKVRRLSLSEQQLEKAAINYGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMV 416
Query: 410 AFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPK 469
AFNMQ G+GRSLWLMHGMFRANGGCGYVKKPNFLL+TGP +EVF+PK
Sbjct: 417 AFNMQ--------------GYGRSLWLMHGMFRANGGCGYVKKPNFLLETGPDDEVFNPK 462
Query: 470 VKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN 529
KLP K TLKVTVYMGEGWYYDF HTHFD YSPPDFY RVGIAGVP DT+MK+TK +EDN
Sbjct: 463 AKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTKAIEDN 522
Query: 530 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRK 589
W+P+WNE FEFPL+VPELALLRIEVHEYDMSEKDDFGGQTCLP+ EL+ GIRA+PLH +K
Sbjct: 523 WLPTWNEAFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPIWELRSGIRAIPLHSQK 582
Query: 590 GERYKSVKLLMHFEFI 605
G++Y +VKLLM FEFI
Sbjct: 583 GDKYNTVKLLMRFEFI 598
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351720874|ref|NP_001236167.1| phosphatidylinositol-specific phospholipase C [Glycine max] gi|945039|gb|AAA74441.1| phosphatidylinositol-specific phospholipase C [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/618 (73%), Positives = 513/618 (83%), Gaps = 36/618 (5%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKE 61
SKQTY VCFC+RRRF +A +EAP +K++F++YSEN MT HL RFL+EVQ+++KA++E
Sbjct: 3 SKQTYSVCFCWRRRFKLALAEAPSEIKTLFEEYSENEFMTPSHLKRFLVEVQRQEKATEE 62
Query: 62 DAQAIIDSLRELKHLNIFQRRG--LNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYF 119
DAQAIIDS R F RRG LNLE FFKYLF D NPPL P+ VHHDMT P+SHYF
Sbjct: 63 DAQAIIDSFRH------FPRRGAGLNLETFFKYLFSDDNPPLLPSHGVHHDMTLPLSHYF 116
Query: 120 IYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179
IYTGHNSYLTGNQL+SDCSDVPII AL++GVRVIELDIWPN+ KDN+DVLHG T+T PVE
Sbjct: 117 IYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNASKDNIDVLHGRTLTTPVE 176
Query: 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFP 239
LI+CLRSIK++AFVASEYPVVITLEDHLTPDLQAKVAEMVT+T G++LFTP SE +KEFP
Sbjct: 177 LIRCLRSIKDHAFVASEYPVVITLEDHLTPDLQAKVAEMVTETFGDLLFTPNSESVKEFP 236
Query: 240 SPESLKRRIIISTKPPKEYLEAKE---------EKEKENDSQRGKGSADEEAWGKEVPNL 290
SPESLK+RIIISTKPPKEYLEAKE EKEK +DSQ GK ++EAWGKEVP+L
Sbjct: 237 SPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSQHGKALGEDEAWGKEVPSL 296
Query: 291 KSLNNSACDKDDFDGGVD-NDEE--DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKV 347
K + D D++ D NDEE D DKS HNEAPEYR+LIAIHAGKPKGGL ECLKV
Sbjct: 297 KG--GTIEDYKDYNVDEDLNDEEEFDESDKSHHNEAPEYRRLIAIHAGKPKGGLAECLKV 354
Query: 348 DPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQ 407
DPDKVRRLSLSEQQLE A +G IVRFTQRN+LR+YPKG R+DSSNYNPLIGW HGAQ
Sbjct: 355 DPDKVRRLSLSEQQLEKAAINHGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQ 414
Query: 408 MVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFD 467
MVAFNMQ G+GRSLWLMHGMFRANGGCGYVKKPNFLL+TGP +EVF+
Sbjct: 415 MVAFNMQ--------------GYGRSLWLMHGMFRANGGCGYVKKPNFLLETGPDDEVFN 460
Query: 468 PKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE 527
PK KLP K TLKVTVYMGEGWYYDF HTHFD YSPPDFY RVGIAGVP DT+MK+TK +E
Sbjct: 461 PKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTKAIE 520
Query: 528 DNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHD 587
DNW+P+WNE FEFPL+VPELALLRIEVHEYDMSEKDDFGGQ CLP+ EL+ GIRA+PLH
Sbjct: 521 DNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQACLPIWELRSGIRAIPLHS 580
Query: 588 RKGERYKSVKLLMHFEFI 605
+KG++Y +VKLLM FEFI
Sbjct: 581 QKGDKYNTVKLLMRFEFI 598
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116563473|gb|ABJ99758.1| phospholipase C [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/605 (72%), Positives = 514/605 (84%), Gaps = 17/605 (2%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MS+QTYRVCFCFRRRF V A+EAP VK++F++YS+NG M ++L RFLIEVQKE+ +S
Sbjct: 1 MSRQTYRVCFCFRRRFRVVAAEAPADVKNLFNKYSDNGVMNAENLQRFLIEVQKEENSSI 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ I+++L +LK LNIF RRGL+L+AFFKYLF DINPP++P +HHDM P+SHYFI
Sbjct: 61 EDAQGIMNNLHDLKILNIFHRRGLHLDAFFKYLFADINPPINPKRGIHHDMNEPLSHYFI 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII+AL +GVRVIELDIWPNS KD+V+VLHGGT+T PV L
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIQALHRGVRVIELDIWPNSAKDDVEVLHGGTLTTPVAL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCLRSIKE+AF SEYPVVITLEDHLTPDLQAKVAEM+TQT G++LF+P S CLK FPS
Sbjct: 181 IKCLRSIKEHAFSVSEYPVVITLEDHLTPDLQAKVAEMITQTFGDMLFSPDS-CLKNFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLKRR++ISTKPPKEYL+AKE KEK DS++G S D EAWG+EV +LK+ N D
Sbjct: 240 PESLKRRVLISTKPPKEYLQAKEVKEK--DSKKGTESPDTEAWGREVSDLKARYNDKDDS 297
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
DD G D++ ++ D SQ N APEY+ LIAIHAGK KGGL + L+VDPDKVRRLSLSEQ
Sbjct: 298 DDGAGVEDDESDEGDPNSQQNVAPEYKCLIAIHAGKGKGGLSDWLRVDPDKVRRLSLSEQ 357
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420
+L AV T+G +I+RFTQRNLLRIYPKGIR DSSNYNP + W+HGAQMVAFNMQ
Sbjct: 358 ELGKAVVTHGKEIIRFTQRNLLRIYPKGIRFDSSNYNPFVAWTHGAQMVAFNMQ------ 411
Query: 421 EVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKV 480
G+GRSLWLMHGMFR+NGGCGYVKKP+ LL+ GP+N++FDP+ LP K TLKV
Sbjct: 412 --------GYGRSLWLMHGMFRSNGGCGYVKKPDILLKAGPNNQIFDPEANLPVKTTLKV 463
Query: 481 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF 540
TV+MGEGWYYDF HTHFDAYSPPDFYA++GIAGVPAD VMKKT+TLEDNWIP+W+E+FEF
Sbjct: 464 TVFMGEGWYYDFNHTHFDAYSPPDFYAKIGIAGVPADNVMKKTRTLEDNWIPTWDEKFEF 523
Query: 541 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 600
PL+VPELALLR+EVHEYDMSEKDDF GQTCLPVSEL+QGIRAV LHDRKGE+Y SVKLLM
Sbjct: 524 PLTVPELALLRVEVHEYDMSEKDDFAGQTCLPVSELRQGIRAVSLHDRKGEKYNSVKLLM 583
Query: 601 HFEFI 605
FE++
Sbjct: 584 RFEYV 588
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2853039|emb|CAA63954.1| phosphoinositide-specific phospholipase C [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/605 (72%), Positives = 508/605 (83%), Gaps = 20/605 (3%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQ+YRVCFCFRRRF V A+EAP VK++F++YS+NG M+ ++LHRFLIEVQKE+ A+
Sbjct: 1 MSKQSYRVCFCFRRRFRVLAAEAPADVKNLFNRYSDNGVMSAENLHRFLIEVQKEENATL 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDA AI+++L +LK LNIF RRGL+L+AFFKYLF DINPPL+ +H DM AP+SHYFI
Sbjct: 61 EDAHAIMNNLHDLKILNIFHRRGLHLDAFFKYLFADINPPLNSKLGIHQDMNAPLSHYFI 120
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCSDVPII+AL +GVRVIELDIWPNS KD+V+VLHGGT+T PV L
Sbjct: 121 YTGHNSYLTGNQLSSDCSDVPIIQALHRGVRVIELDIWPNSAKDDVEVLHGGTLTTPVAL 180
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
IKCL+SIKE+AF SEYPVVITLEDHLT DLQAK AEM+TQT G++LF+ S CLKEFPS
Sbjct: 181 IKCLKSIKEHAFTVSEYPVVITLEDHLTTDLQAKTAEMITQTFGDMLFSSDS-CLKEFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PESLKRR++ISTKPPKEYL+AKE E + +G D EAWG+EV ++K+ N DK
Sbjct: 240 PESLKRRVLISTKPPKEYLQAKE--VNETGAMKGTDQTDTEAWGREVSDIKARYN---DK 294
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
DD D G +D ++ D SQ N APEYR+LIAIHAGK KGGL + L+VDPDKVRRLSLSEQ
Sbjct: 295 DDSDEGEADDSDEEDPTSQQNTAPEYRRLIAIHAGKGKGGLSDWLRVDPDKVRRLSLSEQ 354
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420
+L AV T+G +I+RFTQRN+LRIYPKGIR DSSNYNP W+HGAQMVAFNMQ
Sbjct: 355 ELGKAVVTHGKEIIRFTQRNILRIYPKGIRFDSSNYNPFNAWTHGAQMVAFNMQ------ 408
Query: 421 EVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKV 480
G+GRSLWLMHGMFR NGGCGYVKKP+ LL+ GP+NEVFDP+ LP K TLKV
Sbjct: 409 --------GYGRSLWLMHGMFRGNGGCGYVKKPDILLKAGPNNEVFDPEANLPVKTTLKV 460
Query: 481 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF 540
TV+MGEGWYYDF HTHFDAYSPPDFYAR+GIAGV AD VMKKTKTLEDNWIP+W+E+FEF
Sbjct: 461 TVFMGEGWYYDFEHTHFDAYSPPDFYARIGIAGVDADIVMKKTKTLEDNWIPTWDEQFEF 520
Query: 541 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 600
PL+VPELALLR+EVHEYDMSEKDDF GQTCLPVSEL+QGIRAVPLH+RKGE+Y SVKLL+
Sbjct: 521 PLTVPELALLRVEVHEYDMSEKDDFAGQTCLPVSELRQGIRAVPLHNRKGEKYNSVKLLL 580
Query: 601 HFEFI 605
FEFI
Sbjct: 581 RFEFI 585
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 605 | ||||||
| TAIR|locus:2082018 | 584 | AT3G55940 [Arabidopsis thalian | 0.955 | 0.989 | 0.636 | 6.4e-202 | |
| TAIR|locus:2178848 | 597 | PLC4 "phosphatidylinositol-spe | 0.925 | 0.938 | 0.554 | 6e-167 | |
| TAIR|locus:2178803 | 561 | PLC1 "phospholipase C1" [Arabi | 0.451 | 0.486 | 0.607 | 3.8e-157 | |
| TAIR|locus:2103437 | 581 | PLC2 "phospholipase C 2" [Arab | 0.666 | 0.693 | 0.645 | 4.1e-136 | |
| TAIR|locus:2121239 | 564 | PLC1 "phospholipase C1" [Arabi | 0.376 | 0.404 | 0.543 | 1.4e-120 | |
| TAIR|locus:504956034 | 613 | AT2G40116 [Arabidopsis thalian | 0.456 | 0.450 | 0.682 | 4.9e-108 | |
| TAIR|locus:2099530 | 531 | PLC8 "phosphatidylinositol-spe | 0.366 | 0.418 | 0.478 | 1.8e-93 | |
| TAIR|locus:2178833 | 578 | PLC5 "phosphatidylinositol-spe | 0.457 | 0.479 | 0.604 | 5.7e-91 | |
| TAIR|locus:2075696 | 531 | PLC9 "AT3G47220" [Arabidopsis | 0.366 | 0.418 | 0.481 | 9e-90 | |
| UNIPROTKB|E1C3D7 | 760 | PLCD1 "Uncharacterized protein | 0.363 | 0.289 | 0.343 | 4e-58 |
| TAIR|locus:2082018 AT3G55940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1954 (692.9 bits), Expect = 6.4e-202, P = 6.4e-202
Identities = 389/611 (63%), Positives = 454/611 (74%)
Query: 1 MSKQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+V S AP +K++FD YS+ G MT D L RFLI+VQK+DKA+K
Sbjct: 1 MSKQTYKVCFCFRRRYRHTVSVAPAEIKTLFDNYSDKGLMTTDLLLRFLIDVQKQDKATK 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
E+AQ I+++ L H R GL+L+AFFKYLF N PLS V H DM AP+SHYFI
Sbjct: 61 EEAQDIVNASSSLLH-----RNGLHLDAFFKYLFAVTNSPLSSLEV-HQDMDAPLSHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
YTGHNSYLTGNQL+SDCS++PII AL+KGVRVIELDIWPNS +D +DVLHG T+T+PVEL
Sbjct: 115 YTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSDEDGIDVLHGRTLTSPVEL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239
IKCLR+I+E+AF S+YPVV+TLEDHLTP LQAKVAEMVT GE+LFTP S ECLKEFP
Sbjct: 175 IKCLRAIREHAFDVSDYPVVVTLEDHLTPKLQAKVAEMVTDIFGEMLFTPPSGECLKEFP 234
Query: 240 SPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKGSADEEAWGKEVPNL----KSLN- 294
SP LK+RI+IST ++G+ D+E WG+EVP+ +S++
Sbjct: 235 SPAFLKKRIMISTKPPKEYKAATDDDLV----KKGRDLGDKEVWGREVPSFIRRDRSVDK 290
Query: 295 NSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRR 354
N + DDK + N PEY+ LIAI AGKPKGG+ ECLKVDPDKVRR
Sbjct: 291 NDSNGDDDDDDDDDDDDDDGDDKIKKNAPPEYKHLIAIEAGKPKGGITECLKVDPDKVRR 350
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
LSLSE+QLE A Y IVRFTQRNLLR+YPKG R+ SSNYNPLI WSHGAQMVAFNMQ
Sbjct: 351 LSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTRITSSNYNPLIAWSHGAQMVAFNMQ 410
Query: 415 EIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA 474
G GRSLW+M GMFR NGGCGY+KKP+ LL++ N VFDP+ LP
Sbjct: 411 --------------GLGRSLWVMQGMFRGNGGCGYIKKPDLLLKS---NAVFDPEATLPV 453
Query: 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW 534
K TL+VT+YMGEGWYYDFPHTHFD YSPPDFY RVGIAGVPADTVMKKTKTLEDNWIP+W
Sbjct: 454 KTTLRVTIYMGEGWYYDFPHTHFDRYSPPDFYTRVGIAGVPADTVMKKTKTLEDNWIPAW 513
Query: 535 NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYK 594
+E FEFPL+VPELALLRIEVHEYDMSEKDDFGGQ CLPV EL+QGIRAVPL ++ G + +
Sbjct: 514 DEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVPLRNQDGVKCR 573
Query: 595 SVKLLMHFEFI 605
SVKLL+ EF+
Sbjct: 574 SVKLLVRLEFV 584
|
|
| TAIR|locus:2178848 PLC4 "phosphatidylinositol-speciwc phospholipase C4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1624 (576.7 bits), Expect = 6.0e-167, P = 6.0e-167
Identities = 325/586 (55%), Positives = 407/586 (69%)
Query: 27 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDS-LRELKHLNIFQRRGL 84
V+ +F++Y+E M+ + L + + E E + S E+A+ I+D LR H+ F RR L
Sbjct: 31 VRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNL 90
Query: 85 NLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPII 143
L+ F YLF D+NPP++ VH +M AP+SHYFI+TGHNSYLTGNQL+S+CS++PI
Sbjct: 91 TLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIA 148
Query: 144 RALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITL 203
AL++GVRV+ELD+WP D+V V HG T+T V+L KCL SIK AF S+YPV+ITL
Sbjct: 149 DALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEVKLGKCLESIKANAFAISKYPVIITL 207
Query: 204 EDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXXXXX 263
EDHLTP LQ KVA+M+TQT G++L+ S+ +EFPSPE LK +I+IST
Sbjct: 208 EDHLTPKLQFKVAKMITQTFGDMLYYHDSQGCQEFPSPEELKEKILISTKPPKEYLEAND 267
Query: 264 XXXXXNDSQRGKGSADEEAWGKEVPNLKS----LNNSACXXXXXXXXXXXXXXXSDDKSQ 319
N ++GK S DE+ WGKE +L S L+ D S
Sbjct: 268 TKEKDN-GEKGKDS-DEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCESDTSC 325
Query: 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQR 379
+APEY++LIAIHAGKPKGGL+ LKVDP+K+RRLSLSEQ LE AV +YG D++RFTQ+
Sbjct: 326 QLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQK 385
Query: 380 NLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHG 439
N LRIYPKG R +SSNY P IGW GAQM+AFNMQ G+GR+LWLM G
Sbjct: 386 NFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQ--------------GYGRALWLMEG 431
Query: 440 MFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDA 499
MFRANGGCGYVKKP+FL+ P+ + F PK KKTLKV V MG+GW DF THFD+
Sbjct: 432 MFRANGGCGYVKKPDFLMDASPNGQDFYPKDNSSPKKTLKVKVCMGDGWLLDFKKTHFDS 491
Query: 500 YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 559
YSPPDF+ RVGIAG P D VM+KTK D W P WN+EF FPL+VPELALLR+EVHE+D+
Sbjct: 492 YSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFTFPLAVPELALLRVEVHEHDV 551
Query: 560 SEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605
+EKDDFGGQTCLPVSE++QGIRAVPL +RKG +Y S +LLM FEF+
Sbjct: 552 NEKDDFGGQTCLPVSEIRQGIRAVPLFNRKGVKYSSTRLLMRFEFV 597
|
|
| TAIR|locus:2178803 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 910 (325.4 bits), Expect = 3.8e-157, Sum P(2) = 3.8e-157
Identities = 175/288 (60%), Positives = 208/288 (72%)
Query: 316 DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR 375
++ + + A EYR LI+IHAG KGGLK CL DP++V RLS+SEQ LE T G D+V+
Sbjct: 283 EEDEESVAIEYRDLISIHAGNRKGGLKNCLNGDPNRVIRLSMSEQWLETLAKTRGPDLVK 342
Query: 376 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLW 435
FTQRNLLRI+PK R DSSNY+PL+GW HGAQMVAFNMQ HGR LW
Sbjct: 343 FTQRNLLRIFPKTTRFDSSNYDPLVGWIHGAQMVAFNMQS--------------HGRYLW 388
Query: 436 LMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP-KVKLPAKKTLKVTVYMGEGWYYDFPH 494
+M GMF+ANGGCGYVKKP+ LL GP E+FDP LP K TLKV +Y GEGW DFP
Sbjct: 389 MMQGMFKANGGCGYVKKPDVLLSNGPEGEIFDPCSQNLPIKTTLKVKIYTGEGWNMDFPL 448
Query: 495 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554
HFD YSPPDFYA+VGIAGVP DT +T+ +D W P W++EFEFPL VPEL+LL I V
Sbjct: 449 DHFDRYSPPDFYAKVGIAGVPLDTASYRTEIDKDEWFPIWDKEFEFPLRVPELSLLCITV 508
Query: 555 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 602
+YD + ++DF GQTC P+SE++ GIRAV LHDR GE YK V+LLM F
Sbjct: 509 KDYDSNTQNDFAGQTCFPLSEVRPGIRAVRLHDRAGEVYKHVRLLMRF 556
|
|
| TAIR|locus:2103437 PLC2 "phospholipase C 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
Identities = 268/415 (64%), Positives = 309/415 (74%)
Query: 1 MSKQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+V ASEAP +K++F++YSENG MTVDHLHRFLI+VQK+DKA++
Sbjct: 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATR 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ+II+S L H R GL+L+AFFKYLFGD NPPL+ VHHDM AP+SHYFI
Sbjct: 61 EDAQSIINSASSLLH-----RNGLHLDAFFKYLFGDNNPPLA-LHKVHHDMDAPISHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG T+T PV L
Sbjct: 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSNKDDIDVLHGMTLTTPVGL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFP 239
IKCL++I+ +AF S+YPVV+TLEDHLTPDLQ+KVAEMVT+ GEILFTP E LKEFP
Sbjct: 175 IKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234
Query: 240 SPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKGSADEEAWGKEVPNLKSLNNSACX 299
SP SLKRRIIIST Q+GK DEE WG+EVP+ N S
Sbjct: 235 SPNSLKRRIIISTKPPKEYKEGKDVEVV----QKGKDLGDEEVWGREVPSFIQRNKSEAK 290
Query: 300 XXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSE 359
+DKS+ N P+Y+ LIAIHAGKPKGG+ ECLKVDPDKVRRLSLSE
Sbjct: 291 DDLDGNDDDDDDD-DEDKSKINAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSE 349
Query: 360 QQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
+QLE A Y IVRFTQ NLLRIYPKG RV SSNYNPL+GWSHGAQMVAFNMQ
Sbjct: 350 EQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQ 404
|
|
| TAIR|locus:2121239 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 629 (226.5 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 126/232 (54%), Positives = 164/232 (70%)
Query: 22 EAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQR 81
+ P ++K +F+ YS NG M+ D L RF+ EVQ E A + Q I S+ KH N+F
Sbjct: 21 QPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSV---KHHNVFHH 77
Query: 82 RGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDV 140
GL +L AF++YLF D N PL + VHHDM AP+SHYF+YTGHNSYLTGNQ+NS S
Sbjct: 78 HGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVE 137
Query: 141 PIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVV 200
PI++AL+KGV+VIELD+WPN + +V HG T+T+ +L KCL +IK+ AF S+YPV+
Sbjct: 138 PIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQKCLTAIKDNAFHVSDYPVI 197
Query: 201 ITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIIST 252
ITLEDHL P LQA+VA+M+T+T +LF SE K FPSPE LK +I+IST
Sbjct: 198 ITLEDHLPPKLQAQVAKMLTKTYRGMLFRRVSESFKHFPSPEELKGKILIST 249
|
|
| TAIR|locus:504956034 AT2G40116 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1068 (381.0 bits), Expect = 4.9e-108, P = 4.9e-108
Identities = 198/290 (68%), Positives = 234/290 (80%)
Query: 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIV 374
D+++ ++ P Y++LI IHAGKPKG +KE +KV DKVRRLSLSEQ+L+ + D+V
Sbjct: 337 DEEASEDQKPAYKRLITIHAGKPKGTVKEEMKVVVDKVRRLSLSEQELDRTCSSNSQDVV 396
Query: 375 RFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSL 434
RFTQRNLLRIYPKG R +SSNY PLIGW+HGAQM+AFNMQ G+G+SL
Sbjct: 397 RFTQRNLLRIYPKGTRFNSSNYKPLIGWTHGAQMIAFNMQ--------------GYGKSL 442
Query: 435 WLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 494
WLMHGMFRANGGCGYVKKPNFL++ G H+EVFDP+ KLP K+TLKV VYMG+GW DF H
Sbjct: 443 WLMHGMFRANGGCGYVKKPNFLMKKGFHDEVFDPRKKLPVKETLKVKVYMGDGWRMDFSH 502
Query: 495 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554
THFDAYSPPDFY ++ I GVPAD KKTK +EDNW P W+EEF FPL+VPELALLRIEV
Sbjct: 503 THFDAYSPPDFYTKMFIVGVPADNAKKKTKIIEDNWYPIWDEEFSFPLTVPELALLRIEV 562
Query: 555 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604
EYDMSEKDDFGGQTCLPV+EL+ GIR+VPL+D+KGE+ KSV+LLM F F
Sbjct: 563 REYDMSEKDDFGGQTCLPVAELRPGIRSVPLYDKKGEKMKSVRLLMRFIF 612
|
|
| TAIR|locus:2099530 PLC8 "phosphatidylinositol-speciwc phospholipase C8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 554 (200.1 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 114/238 (47%), Positives = 144/238 (60%)
Query: 367 GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426
G Y DI+ FTQ+ LR P+ + + Y P W HGAQ++A + +E +E
Sbjct: 309 GWYETDIISFTQKRFLRTRPQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKE-------- 360
Query: 427 GDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGE 486
LWLM GMFRANGGCGYVKKP+FLL GP VF P V K LKV +YMG+
Sbjct: 361 ------KLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTVNPVVVKILKVKIYMGD 413
Query: 487 GWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE 546
GW DF S PD Y R+ IAGVP D + KT + W P+W EEF FPL+ P+
Sbjct: 414 GWIVDFKK-RIGRLSKPDLYVRISIAGVPHDENIMKTTVKNNEWTPTWGEEFTFPLTYPD 472
Query: 547 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604
LAL+ EV++Y++S D F GQTCLPVSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 473 LALISFEVYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
|
| TAIR|locus:2178833 PLC5 "phosphatidylinositol-speciwc phospholipase C5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 176/291 (60%), Positives = 210/291 (72%)
Query: 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIV 374
D +S + + Y +LI I +G K GLKE L +D VRRLSL EQ+ + A YG +++
Sbjct: 302 DQESSNLDFLTYSRLITIPSGNAKNGLKEALTIDNGGVRRLSLREQKFKKATEMYGTEVI 361
Query: 375 RFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSL 434
+FTQ+NLLRIYPK RV+SSNY P GW +GAQMVAFNMQ G+GR+L
Sbjct: 362 KFTQKNLLRIYPKATRVNSSNYRPYNGWMYGAQMVAFNMQ--------------GYGRAL 407
Query: 435 WLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPH 494
W+MHGMFR NGGCGYVKKP+F++ EVF+PK KLP KKTLKV VYMG+GW F
Sbjct: 408 WMMHGMFRGNGGCGYVKKPDFMMNNNLSGEVFNPKAKLPIKKTLKVKVYMGKGWDSGFQR 467
Query: 495 THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554
T F+ +S P+FY RVGI GV D VMKKTK + W P WNEEFEF L+VPELALLRIEV
Sbjct: 468 TCFNTWSSPNFYTRVGITGVRGDKVMKKTKKEQKTWEPFWNEEFEFQLTVPELALLRIEV 527
Query: 555 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605
H+Y+M EKDDF GQTCLPVSEL+QGIR+VPL+DRKGER SV LLM F F+
Sbjct: 528 HDYNMPEKDDFSGQTCLPVSELRQGIRSVPLYDRKGERLVSVTLLMRFHFL 578
|
|
| TAIR|locus:2075696 PLC9 "AT3G47220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 547 (197.6 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 115/239 (48%), Positives = 142/239 (59%)
Query: 367 GTYGNDIVRFTQRNLLRIYPKGIRVDSSN-YNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425
G Y D++ FTQ LR PK + S+ Y P W HGAQM+A + Q+ +E
Sbjct: 308 GWYERDVISFTQNKFLRTRPKKRNLLSNPPYKPQRAWMHGAQMIALSRQDDKE------- 360
Query: 426 TGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMG 485
LWLM GMFRANGGCGYVKKPNFLL G VF P KTLKV +YMG
Sbjct: 361 -------KLWLMQGMFRANGGCGYVKKPNFLLNAGSSG-VFYPTENPVVVKTLKVKIYMG 412
Query: 486 EGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP 545
+GW DF S PD Y R+ IAGVP D + T + W P+W EEF FPL+ P
Sbjct: 413 DGWIVDFKK-RIGRLSKPDLYVRISIAGVPHDEKIMNTTVKNNEWKPTWGEEFTFPLTYP 471
Query: 546 ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604
+LAL+ EV++Y++S D F GQTCLPVSEL +GIRAVPL+D +G+ S LL F++
Sbjct: 472 DLALISFEVYDYEVSTPDYFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530
|
|
| UNIPROTKB|E1C3D7 PLCD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 339 (124.4 bits), Expect = 4.0e-58, Sum P(2) = 4.0e-58
Identities = 78/227 (34%), Positives = 124/227 (54%)
Query: 27 VKSMFDQYSE-NGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ ++F +YS+ G M+ +L RFL E Q+E+ A A +I + +R +
Sbjct: 214 IDTIFQKYSDAEGLMSCQNLVRFLYETQQEEDAVVA-APPLIQRYEPSERAK--KRNAMT 270
Query: 86 LEAFFKYLFGDINPPLSPTP-VVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR 144
+ F YL D + + V+ DMT P+SHYF+ + HN+YL +QL S IR
Sbjct: 271 KDGFLMYLLSDDGNIFNTSHRKVYQDMTQPLSHYFVSSSHNTYLMDDQLTGPSSTEAYIR 330
Query: 145 ALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLE 204
AL KG R +ELD W + + + HG T+T+ + +++IK YAF S YPV+I+LE
Sbjct: 331 ALTKGCRCVELDCWDGPNSEPI-IYHGYTLTSKILFSDVIKAIKNYAFKTSPYPVIISLE 389
Query: 205 DHLTPDLQAKVAEMVTQTLGEILFT-PGSECLKEFPSPESLKRRIII 250
+H + + Q +A+ +T L ++L P +FPSPE LK +I++
Sbjct: 390 NHCSLEQQKVMAQHMTTILQDMLLVAPIDGSKSQFPSPEQLKGKILV 436
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q39033 | PLCD2_ARATH | 3, ., 1, ., 4, ., 1, 1 | 0.7128 | 0.9586 | 0.9982 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 605 | |||
| PLN02222 | 581 | PLN02222, PLN02222, phosphoinositide phospholipase | 0.0 | |
| PLN02952 | 599 | PLN02952, PLN02952, phosphoinositide phospholipase | 0.0 | |
| PLN02228 | 567 | PLN02228, PLN02228, Phosphoinositide phospholipase | 0.0 | |
| PLN02230 | 598 | PLN02230, PLN02230, phosphoinositide phospholipase | 0.0 | |
| PLN02223 | 537 | PLN02223, PLN02223, phosphoinositide phospholipase | 1e-131 | |
| cd08599 | 228 | cd08599, PI-PLCc_plant, Catalytic domain of plant | 7e-84 | |
| pfam00388 | 145 | pfam00388, PI-PLC-X, Phosphatidylinositol-specific | 2e-66 | |
| cd08558 | 226 | cd08558, PI-PLCc_eukaryota, Catalytic domain of eu | 6e-65 | |
| smart00149 | 115 | smart00149, PLCYc, Phospholipase C, catalytic doma | 5e-55 | |
| smart00148 | 143 | smart00148, PLCXc, Phospholipase C, catalytic doma | 8e-55 | |
| cd08598 | 231 | cd08598, PI-PLC1c_yeast, Catalytic domain of putat | 3e-43 | |
| cd00275 | 128 | cd00275, C2_PLC_like, C2 domain present in Phospho | 2e-41 | |
| cd08593 | 257 | cd08593, PI-PLCc_delta, Catalytic domain of metazo | 5e-38 | |
| cd08592 | 229 | cd08592, PI-PLCc_gamma, Catalytic domain of metazo | 7e-37 | |
| cd08597 | 260 | cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of | 7e-37 | |
| cd08591 | 257 | cd08591, PI-PLCc_beta, Catalytic domain of metazoa | 2e-33 | |
| cd08594 | 227 | cd08594, PI-PLCc_eta, Catalytic domain of metazoan | 3e-33 | |
| pfam00387 | 117 | pfam00387, PI-PLC-Y, Phosphatidylinositol-specific | 4e-33 | |
| cd08629 | 258 | cd08629, PI-PLCc_delta1, Catalytic domain of metaz | 5e-33 | |
| cd08599 | 228 | cd08599, PI-PLCc_plant, Catalytic domain of plant | 1e-32 | |
| cd08630 | 258 | cd08630, PI-PLCc_delta3, Catalytic domain of metaz | 4e-31 | |
| cd08627 | 229 | cd08627, PI-PLCc_gamma1, Catalytic domain of metaz | 1e-30 | |
| cd08626 | 257 | cd08626, PI-PLCc_beta4, Catalytic domain of metazo | 1e-29 | |
| cd08628 | 254 | cd08628, PI-PLCc_gamma2, Catalytic domain of metaz | 2e-28 | |
| cd08558 | 226 | cd08558, PI-PLCc_eukaryota, Catalytic domain of eu | 3e-28 | |
| cd08595 | 257 | cd08595, PI-PLCc_zeta, Catalytic domain of metazoa | 8e-28 | |
| cd08633 | 254 | cd08633, PI-PLCc_eta2, Catalytic domain of metazoa | 2e-27 | |
| cd08631 | 258 | cd08631, PI-PLCc_delta4, Catalytic domain of metaz | 1e-26 | |
| cd08596 | 254 | cd08596, PI-PLCc_epsilon, Catalytic domain of meta | 2e-25 | |
| cd08632 | 253 | cd08632, PI-PLCc_eta1, Catalytic domain of metazoa | 7e-25 | |
| cd08624 | 261 | cd08624, PI-PLCc_beta2, Catalytic domain of metazo | 4e-24 | |
| cd08625 | 258 | cd08625, PI-PLCc_beta3, Catalytic domain of metazo | 7e-22 | |
| cd08623 | 258 | cd08623, PI-PLCc_beta1, Catalytic domain of metazo | 7e-21 | |
| pfam00168 | 85 | pfam00168, C2, C2 domain | 2e-20 | |
| smart00239 | 101 | smart00239, C2, Protein kinase C conserved region | 3e-20 | |
| cd00137 | 274 | cd00137, PI-PLCc, Catalytic domain of prokaryotic | 5e-20 | |
| pfam09279 | 83 | pfam09279, efhand_like, Phosphoinositide-specific | 2e-19 | |
| cd08594 | 227 | cd08594, PI-PLCc_eta, Catalytic domain of metazoan | 4e-16 | |
| cd08593 | 257 | cd08593, PI-PLCc_delta, Catalytic domain of metazo | 3e-15 | |
| cd08598 | 231 | cd08598, PI-PLC1c_yeast, Catalytic domain of putat | 1e-14 | |
| cd08631 | 258 | cd08631, PI-PLCc_delta4, Catalytic domain of metaz | 4e-14 | |
| cd08591 | 257 | cd08591, PI-PLCc_beta, Catalytic domain of metazoa | 6e-13 | |
| cd08592 | 229 | cd08592, PI-PLCc_gamma, Catalytic domain of metazo | 3e-12 | |
| cd08626 | 257 | cd08626, PI-PLCc_beta4, Catalytic domain of metazo | 1e-11 | |
| cd08628 | 254 | cd08628, PI-PLCc_gamma2, Catalytic domain of metaz | 2e-11 | |
| cd08633 | 254 | cd08633, PI-PLCc_eta2, Catalytic domain of metazoa | 2e-11 | |
| cd08595 | 257 | cd08595, PI-PLCc_zeta, Catalytic domain of metazoa | 3e-11 | |
| cd08632 | 253 | cd08632, PI-PLCc_eta1, Catalytic domain of metazoa | 3e-11 | |
| cd08596 | 254 | cd08596, PI-PLCc_epsilon, Catalytic domain of meta | 5e-11 | |
| cd08623 | 258 | cd08623, PI-PLCc_beta1, Catalytic domain of metazo | 1e-10 | |
| cd08630 | 258 | cd08630, PI-PLCc_delta3, Catalytic domain of metaz | 4e-10 | |
| cd08625 | 258 | cd08625, PI-PLCc_beta3, Catalytic domain of metazo | 7e-10 | |
| cd08624 | 261 | cd08624, PI-PLCc_beta2, Catalytic domain of metazo | 8e-10 | |
| cd08627 | 229 | cd08627, PI-PLCc_gamma1, Catalytic domain of metaz | 1e-09 | |
| cd08597 | 260 | cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of | 2e-09 | |
| cd00030 | 102 | cd00030, C2, C2 domain | 2e-09 | |
| cd08629 | 258 | cd08629, PI-PLCc_delta1, Catalytic domain of metaz | 9e-09 | |
| cd08557 | 271 | cd08557, PI-PLCc_bacteria_like, Catalytic domain o | 7e-08 | |
| cd04025 | 123 | cd04025, C2B_RasA1_RasA4, C2 domain second repeat | 4e-07 | |
| cd08555 | 179 | cd08555, PI-PLCc_GDPD_SF, Catalytic domain of phos | 6e-07 | |
| cd04026 | 131 | cd04026, C2_PKC_alpha_gamma, C2 domain in Protein | 3e-06 | |
| cd04040 | 115 | cd04040, C2D_Tricalbin-like, C2 domain fourth repe | 7e-06 | |
| cd08675 | 137 | cd08675, C2B_RasGAP, C2 domain second repeat of Ra | 6e-05 | |
| COG5038 | 1227 | COG5038, COG5038, Ca2+-dependent lipid-binding pro | 7e-05 | |
| cd04042 | 121 | cd04042, C2A_MCTP_PRT, C2 domain first repeat foun | 4e-04 | |
| cd04032 | 127 | cd04032, C2_Perforin, C2 domain of Perforin | 0.001 | |
| cd08373 | 127 | cd08373, C2A_Ferlin, C2 domain first repeat in Fer | 0.001 | |
| cd08391 | 121 | cd08391, C2A_C2C_Synaptotagmin_like, C2 domain fir | 0.002 | |
| cd04038 | 145 | cd04038, C2_ArfGAP, C2 domain present in Arf GTPas | 0.002 | |
| cd00276 | 134 | cd00276, C2B_Synaptotagmin, C2 domain second repea | 0.002 | |
| cd04030 | 127 | cd04030, C2C_KIAA1228, C2 domain third repeat pres | 0.003 | |
| cd04024 | 128 | cd04024, C2A_Synaptotagmin-like, C2 domain first r | 0.004 | |
| cd08384 | 133 | cd08384, C2B_Rabphilin_Doc2, C2 domain second repe | 0.004 |
| >gnl|CDD|177868 PLN02222, PLN02222, phosphoinositide phospholipase C 2 | Back alignment and domain information |
|---|
Score = 932 bits (2410), Expect = 0.0
Identities = 430/606 (70%), Positives = 498/606 (82%), Gaps = 26/606 (4%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASK 60
MSKQTY+VCFCFRRRF ASEAP +K++F++YSENG MTVDHLHRFLI+VQK+DKA++
Sbjct: 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATR 60
Query: 61 EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFI 120
EDAQ+II+S L H R GL+L+AFFKYLFGD NPPL+ VHHDM AP+SHYFI
Sbjct: 61 EDAQSIINSASSLLH-----RNGLHLDAFFKYLFGDNNPPLA-LHEVHHDMDAPISHYFI 114
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG T+T PV L
Sbjct: 115 FTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSDKDDIDVLHGMTLTTPVGL 174
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239
IKCL++I+ +AF S+YPVV+TLEDHLTPDLQ+KVAEMVT+ GEILFTP E LKEFP
Sbjct: 175 IKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234
Query: 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD 299
SP SLK+RIIISTKPPKEY E K+++ Q+GK DEE WG+EVP+ N S D
Sbjct: 235 SPNSLKKRIIISTKPPKEYKEGKDDEV----VQKGKDLGDEEVWGREVPSFIQRNKSV-D 289
Query: 300 KDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSE 359
K+D +G D+D++D +DKS+ N P+Y+ LIAIHAGKPKGG+ ECLKVDPDKVRRLSLSE
Sbjct: 290 KNDSNGDDDDDDDDGEDKSKKNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSE 349
Query: 360 QQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEG 419
+QLE A Y IVRFTQ NLLRIYPKG RV SSNYNPL+GWSHGAQMVAFNMQ
Sbjct: 350 EQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQ----- 404
Query: 420 IEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLK 479
G+GRSLWLM GMFRANGGCGY+KKP+ LL++G +++FDPK LP K TL+
Sbjct: 405 ---------GYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLR 455
Query: 480 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFE 539
VT+YMGEGWY+DF HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNWIP+W+E FE
Sbjct: 456 VTIYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFE 515
Query: 540 FPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLL 599
FPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPV EL QGIRA PLH RKGE+YKSVKLL
Sbjct: 516 FPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPVWELSQGIRAFPLHSRKGEKYKSVKLL 575
Query: 600 MHFEFI 605
+ EF+
Sbjct: 576 VKVEFV 581
|
Length = 581 |
| >gnl|CDD|178538 PLN02952, PLN02952, phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 820 bits (2118), Expect = 0.0
Identities = 364/608 (59%), Positives = 448/608 (73%), Gaps = 25/608 (4%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKAS 59
Y++ F R+F + +E PD VK +F ++S G M D L RFL+ Q E +
Sbjct: 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCT 73
Query: 60 KEDAQAIIDS-LRELKHLNIFQRRGLNLEAFFKYL-FGDINPPLSPTPVVHHDMTAPVSH 117
+AQ I++ + H+ + R GLNL+ FF +L + D+N P+ TP VHHDMTAP+SH
Sbjct: 74 LAEAQRIVEEVINRRHHVTRYTRHGLNLDDFFHFLLYDDLNGPI--TPQVHHDMTAPLSH 131
Query: 118 YFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAP 177
YFIYTGHNSYLTGNQL+SDCS+VPI++ALQ+GVRVIELD+WP S KD + VLHG T+T P
Sbjct: 132 YFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPGSTKDEILVLHGRTLTTP 191
Query: 178 VELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKE 237
V LIKCL+SI++YAF +S YPV+ITLEDHLTPDLQAKVAEM TQ G++L+ P S+ L +
Sbjct: 192 VPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQ 251
Query: 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSA 297
FPSPESLK RIIISTKPPKEYLE+ + + + +E L+S+
Sbjct: 252 FPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEETEEAQTLESMLFEQ 311
Query: 298 CDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSL 357
+ D D+D++D +KS + P Y++LI IHAGKPKG LK+ +KV DKVRRLSL
Sbjct: 312 ----EADSRSDSDQDD--NKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSL 365
Query: 358 SEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIE 417
SEQ+LE A T G D+VRFTQRN+LRIYPKG R+ SSNY PLIGW HGAQM+AFNMQ
Sbjct: 366 SEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSSNYKPLIGWMHGAQMIAFNMQ--- 422
Query: 418 EGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKT 477
G+G+SLWLMHGMFRANGGCGY+KKP+FL++ G H+EVFDPK KLP KKT
Sbjct: 423 -----------GYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKT 471
Query: 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEE 537
LKV VY+G+GW DF HTHFD+YSPPDFY ++ I GVPAD KKTK +EDNW P+WNEE
Sbjct: 472 LKVKVYLGDGWRLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEE 531
Query: 538 FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVK 597
F FPL+VPELALLRIEV EYDMSEKDDFGGQTCLPVSEL+ GIR+VPLHD+KGE+ K+V+
Sbjct: 532 FSFPLTVPELALLRIEVREYDMSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGEKLKNVR 591
Query: 598 LLMHFEFI 605
LLM F F+
Sbjct: 592 LLMRFIFV 599
|
Length = 599 |
| >gnl|CDD|177873 PLN02228, PLN02228, Phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 694 bits (1791), Expect = 0.0
Identities = 316/602 (52%), Positives = 395/602 (65%), Gaps = 47/602 (7%)
Query: 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKED 62
++++VCFC R F E P ++K +F+ YS NG M+ D L RF+ EVQ E A
Sbjct: 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHA---G 58
Query: 63 AQAIIDSLRELKHLNIFQRRGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIY 121
+ D +KH N+F GL +L AF++YLF D N PL + VHHDM AP+SHYF+Y
Sbjct: 59 LDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVY 118
Query: 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELI 181
TGHNSYLTGNQ+NS S PI++AL+KGV+VIELD+WPN + +V HG T+T+ +L
Sbjct: 119 TGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQ 178
Query: 182 KCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241
KCL +IK+ AF S+YPVVITLEDHL P+LQA+VA+M+T+T +LF SE K FPSP
Sbjct: 179 KCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSP 238
Query: 242 ESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD 301
E LK +I+ISTKPPKEYLE+K + + E +W + + N
Sbjct: 239 EELKNKILISTKPPKEYLESKTVQTTRTPT------VKETSWKR----VADAENKI---- 284
Query: 302 DFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQ 361
EE D++S EA YR LIAIHA K LK+CL DP+K R+S+ EQ
Sbjct: 285 --------LEEYKDEES---EAVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQW 333
Query: 362 LENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIE 421
LE V T G D+VRFTQRNL+RIYPKG RVDSSNY+P +GW+HGAQMVAFNMQ
Sbjct: 334 LETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQ------- 386
Query: 422 VNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVT 481
GHG+ LW+M GMFRANGGCGYVKKP LL +FDP +LP K TLKV
Sbjct: 387 -------GHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVK 436
Query: 482 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEF 540
+Y GEGW DF THFD YSPPDF+ ++GIAGVP DTV +T+T D W P W N+EF F
Sbjct: 437 IYTGEGWDLDFHLTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLF 496
Query: 541 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 600
L VPELALL +V +YD ++DF GQTCLP+ ELK G+RAV LHDR G+ YK+ +LL+
Sbjct: 497 QLRVPELALLWFKVQDYDNDTQNDFAGQTCLPLPELKSGVRAVRLHDRAGKAYKNTRLLV 556
Query: 601 HF 602
F
Sbjct: 557 SF 558
|
Length = 567 |
| >gnl|CDD|177875 PLN02230, PLN02230, phosphoinositide phospholipase C 4 | Back alignment and domain information |
|---|
Score = 672 bits (1736), Expect = 0.0
Identities = 343/609 (56%), Positives = 437/609 (71%), Gaps = 27/609 (4%)
Query: 5 TYRVCFCFRRRFHVAASEAPDAVKSMFDQYSE-NGTMTVDHLHRFLIEVQKED-KASKED 62
+Y+ C F R+F + S V+ +F++Y++ + M+ + L + + E + + S E+
Sbjct: 9 SYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEE 68
Query: 63 AQAIIDS-LRELKHLNIFQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFI 120
A+ I+D LR H+ F RR L L+ F YLF D+NPP++ VH +M AP+SHYFI
Sbjct: 69 AERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFI 126
Query: 121 YTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVEL 180
+TGHNSYLTGNQL+S+CS++PI AL++GVRV+ELD+WP D+V V HG T+T V+L
Sbjct: 127 FTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGT-DDVCVKHGRTLTKEVKL 185
Query: 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPS 240
KCL SIK AF S+YPV+ITLEDHLTP LQ KVA+M+TQT G++L+ SE +EFPS
Sbjct: 186 GKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEFPS 245
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
PE LK +I+ISTKPPKEYLEA + KEK+N ++GK S DE+ WGKE +L S +
Sbjct: 246 PEELKEKILISTKPPKEYLEANDAKEKDN-GEKGKDS-DEDVWGKEPEDLISTQSDLDKV 303
Query: 301 DDFDGGVDNDEED----SDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLS 356
++ D+E+ D S +APEY++LIAIHAGKPKGGL+ LKVDP+K+RRLS
Sbjct: 304 TSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLS 363
Query: 357 LSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEI 416
LSEQ LE AV +YG D++RFTQ+N LRIYPKG R +SSNY P IGW GAQM+AFNMQ
Sbjct: 364 LSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQ-- 421
Query: 417 EEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKK 476
G+GR+LWLM GMFRANGGCGYVKKP+FL+ GP+ + F PK KK
Sbjct: 422 ------------GYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKK 469
Query: 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 536
TLKV V MG+GW DF THFD+YSPPDF+ RVGIAG P D VM+KTK D W P WN+
Sbjct: 470 TLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNK 529
Query: 537 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSV 596
EF FPL+VPELALLR+EVHE+D++EKDDFGGQTCLPVSE++QGI AVPL +RKG +Y S
Sbjct: 530 EFIFPLAVPELALLRVEVHEHDINEKDDFGGQTCLPVSEIRQGIHAVPLFNRKGVKYSST 589
Query: 597 KLLMHFEFI 605
+LLM FEF+
Sbjct: 590 RLLMRFEFV 598
|
Length = 598 |
| >gnl|CDD|165867 PLN02223, PLN02223, phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Score = 395 bits (1016), Expect = e-131
Identities = 228/605 (37%), Positives = 322/605 (53%), Gaps = 85/605 (14%)
Query: 13 RRRFHVAASEAPDAVKSMF-DQYSENGTMTVDHLHRF--LIEVQKEDKASKEDAQAIIDS 69
R++F + + PD + + F +++ + L RF L++ +K++ + +A I
Sbjct: 4 RKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIA- 62
Query: 70 LRELKH----LNIFQR-RGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTG 123
ELK + F+ R L L+ ++LF ++NPP+ V HHDM AP+SHYFI+T
Sbjct: 63 -AELKRRKCDILAFRNLRCLELDHLNEFLFSTELNPPIGDQ-VRHHDMHAPLSHYFIHTS 120
Query: 124 HNSYLTGNQL-NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182
SY TGN + S PII AL++GVRV+ELD+ P+ K D + V P+EL +
Sbjct: 121 LKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPDGK-DGICVRPKWNFEKPLELQE 179
Query: 183 CLRSIKEYAFVASE-YPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG-SECLKEFPS 240
CL +IKE+AF YP++IT +D L PDLQ+K +M+ QT G++++ L+EFPS
Sbjct: 180 CLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEFPS 239
Query: 241 PESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDK 300
P L+ +I+IS +PPKE L AK
Sbjct: 240 PAELQNKILISRRPPKELLYAK-------------------------------------- 261
Query: 301 DDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQ 360
DGGV E + + Y+ L+ HA +P+G L++ L D +++
Sbjct: 262 -ADDGGVGVRNEL--EIQEGPADKNYQSLVGFHAVEPRGMLQKALTGKADDIQQ------ 312
Query: 361 QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDS-SNYNPLIGWSHGAQMVAFNMQEIEEG 419
G Y DI+ FTQ+ LR PK + + Y P W HGAQ++A + ++ +E
Sbjct: 313 -----PGWYERDIISFTQKKFLRTRPKKKNLLINAPYKPQRAWMHGAQLIALSRKDDKE- 366
Query: 420 IEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLK 479
LWLM GMFRANGGCGYVKKP+FLL GP VF P K LK
Sbjct: 367 -------------KLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTENPVVVKILK 412
Query: 480 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFE 539
V +YMG+GW DF S PD Y R+ IAGVP D + KT + W P+W EEF
Sbjct: 413 VKIYMGDGWIVDF-KKRIGRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFT 471
Query: 540 FPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLL 599
FPL+ P+LAL+ EV++Y++S D F GQTCLPVSEL +GIRAVPL+D +G+ S LL
Sbjct: 472 FPLTYPDLALISFEVYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLL 531
Query: 600 MHFEF 604
F++
Sbjct: 532 TRFKW 536
|
Length = 537 |
| >gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 261 bits (669), Expect = 7e-84
Identities = 96/161 (59%), Positives = 122/161 (75%), Gaps = 2/161 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
HHDMTAP+SHYFI++ HNSYLTGNQL+S S PII AL +G RVIELD+WP + D +
Sbjct: 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGRGD-IC 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
VLHGGT+T PV+ C+++IKE AF ASEYPV+ITLE+HL+P+LQAK A+++ +TLG+ L
Sbjct: 60 VLHGGTLTKPVKFEDCIKAIKENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKL 119
Query: 228 FTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267
F P SE +EFPSPE LK +I+IS KPP E + K
Sbjct: 120 FYPDSEDLPEEFPSPEELKGKILISDKPPVIRNSLSETQLK 160
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228 |
| >gnl|CDD|215892 pfam00388, PI-PLC-X, Phosphatidylinositol-specific phospholipase C, X domain | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 2e-66
Identities = 66/146 (45%), Positives = 95/146 (65%), Gaps = 3/146 (2%)
Query: 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLH 170
M+ P+SHYFI + HN+YLTG+QL S I+AL +G R +ELD W + V H
Sbjct: 1 MSQPLSHYFISSSHNTYLTGDQLTGKSSVEAYIQALLRGCRCVELDCW-DGPDGEPVVYH 59
Query: 171 GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTP 230
G T+T+ + L +IKEYAFV SEYPV+++LE+H +P+ QAK+AE++ + G++L+TP
Sbjct: 60 GYTLTSKIPFRDVLEAIKEYAFVTSEYPVILSLENHCSPEQQAKMAEILKEIFGDMLYTP 119
Query: 231 --GSECLKEFPSPESLKRRIIISTKP 254
E E PSPE LK +I++ K
Sbjct: 120 PLDDESSTELPSPEDLKGKILLKVKK 145
|
This associates with pfam00387 to form a single structural unit. Length = 145 |
| >gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 211 bits (541), Expect = 6e-65
Identities = 65/148 (43%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YLTG+QL + S IRAL +G R +ELD W + V
Sbjct: 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPDGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + +IKEYAFV S YPV+++LE+H + + Q K+A+++ + G+ L
Sbjct: 60 VYHGHTLTSKILFKDVIEAIKEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTKP 254
T P E + PSPE LK +I+I K
Sbjct: 120 LTPPLDENPVQLPSPEQLKGKILIKGKK 147
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226 |
| >gnl|CDD|128454 smart00149, PLCYc, Phospholipase C, catalytic domain (part); domain Y | Back alignment and domain information |
|---|
Score = 181 bits (462), Expect = 5e-55
Identities = 52/128 (40%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 329 LIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKG 388
L+ A + +P S SE + + + D VR+ QR L R+YPKG
Sbjct: 3 LVIYCAPVKFRSFESAESKNP-FYEMSSFSETKAKKLLKKSPTDFVRYNQRQLSRVYPKG 61
Query: 389 IRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCG 448
RVDSSNYNP + W+HG QMVA N Q + + L GMFRANGGCG
Sbjct: 62 TRVDSSNYNPQVFWNHGCQMVALNFQ--------------TPDKPMQLNQGMFRANGGCG 107
Query: 449 YVKKPNFL 456
YV KP+FL
Sbjct: 108 YVLKPDFL 115
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 115 |
| >gnl|CDD|197543 smart00148, PLCXc, Phospholipase C, catalytic domain (part); domain X | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 8e-55
Identities = 63/144 (43%), Positives = 93/144 (64%), Gaps = 2/144 (1%)
Query: 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLH 170
M P+SHYFI + HN+YLTG QL + S I+AL G R +ELD W + V + H
Sbjct: 1 MDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDAGCRCVELDCWDGPDGEPV-IYH 59
Query: 171 GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTP 230
G T T P++L + L +IK++AFV S YPV+++LE+H +PD QAK+A+M + G++L+TP
Sbjct: 60 GHTFTLPIKLSEVLEAIKDFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTP 119
Query: 231 GSECLKE-FPSPESLKRRIIISTK 253
E PSPE L+ +I++ +
Sbjct: 120 PLTSSLEVLPSPEQLRGKILLKVR 143
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 143 |
| >gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 3e-43
Identities = 60/146 (41%), Positives = 90/146 (61%), Gaps = 2/146 (1%)
Query: 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168
D++ P++ YFI + HN+YL G QL D S IRALQ+G R +E+D+W + V V
Sbjct: 2 EDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDDGEPV-V 60
Query: 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF 228
HG T+T+ V R+IK+YAFV S YP++++LE H + Q ++ E++ +T G++L
Sbjct: 61 THGYTLTSSVPFRDVCRAIKKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLV 120
Query: 229 T-PGSECLKEFPSPESLKRRIIISTK 253
T P E PSPE L+ +I+I K
Sbjct: 121 TEPLDGLEDELPSPEELRGKILIKVK 146
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes from Saccharomyces cerevisiae. Plc1p contains both highly conserved X- and Y- regions of PLC catalytic core domain, as well as a presumptive EF-hand like calcium binding motif. Experiments show that Plc1p displays calcium dependent catalytic properties with high similarity to those of the mammalian PLCs, and plays multiple roles in modulating the membrane/protein interactions in filamentation control. CaPlc1p encoded by CAPLC1 from the closely related yeast Candida albicans, an orthologue of S. cerevisiae Plc1p, is also included in this group. Like Plc1p, CaPlc1p has conserved presumptive catalytic domain, shows PLC activity when expressed in E. coli, and is involved in multiple cellular processes. There are two other gene copies of CAPLC1 in C. albicans, CAPLC2 (also named as PIPLC) and CAPLC3. Experiments show CaPlc1p is the only enzyme in C. albicans which functions as PLC. The biological functions of CAPLC2 and CAPLC3 gene products must be clearly different from CaPlc1p, but their exact roles remain unclear. Moreover, CAPLC2 and CAPLC3 gene products are more similar to extracellular bacterial PI-PLC than to the eukaryotic PI-PLC, and they are not included in this subfamily. Length = 231 |
| >gnl|CDD|175974 cd00275, C2_PLC_like, C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
Score = 145 bits (369), Expect = 2e-41
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNWI-P 532
TL + + G+ P D S D Y V I G+PA D+ KTK +++N P
Sbjct: 1 PLTLTIKIISGQQL----PKPKGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNP 56
Query: 533 SWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 592
WNE FEF ++VPELA LR V++ D DDF GQ CLP+ L+QG R VPL D KGE
Sbjct: 57 VWNETFEFDVTVPELAFLRFVVYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEP 115
Query: 593 YKSVKLLMHFEF 604
+ L +H +
Sbjct: 116 LELSTLFVHIDI 127
|
PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-II topology. Length = 128 |
| >gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 5e-38
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YL +QL S IRAL+KG R +ELD W + +
Sbjct: 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPDGEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T+T+ + +++I+EYAF S YPV+++LE+H + + Q +A+ + LG+ L
Sbjct: 60 IYHGHTLTSKILFKDVIQAIREYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTK 253
T P L PSPE LK +I++ K
Sbjct: 120 LTQPLDGVLTALPSPEELKGKILVKGK 146
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Different PI-PLC-delta isozymes have different tissue distribution and different subcellular locations. PI-PLC-delta1 is mostly a cytoplasmic protein, PI-PLC-delta3 is located in the membrane, and PI-PLC-delta4 is predominantly detected in the cell nucleus. Aside from three PI-PLC-delta isozymes identified in mammals, some eukaryotic PI-PLC-delta homologs have been classified to this CD. Length = 257 |
| >gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 7e-37
Identities = 64/162 (39%), Positives = 96/162 (59%), Gaps = 6/162 (3%)
Query: 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168
DM P+SHY+I + HN+YLTG+QL+S+ S R L+ G R IELD W + +
Sbjct: 2 QDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPDGMPI-I 60
Query: 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF 228
HG T+T+ ++ + L++IKE+AFV SEYPV++++E+H + Q +A+ + G++L
Sbjct: 61 YHGHTLTSKIKFMDVLKTIKEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLL 120
Query: 229 T-PGSECLKEFPSPESLKRRIIISTKPPK----EYLEAKEEK 265
T P + PSP LKR+III K + E K EK
Sbjct: 121 TQPVDRNADQLPSPNQLKRKIIIKHKKLFYEMSSFPETKAEK 162
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. There are two PI-PLC-gamma isozymes (1-2). They are activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Aside from the two PI-PLC-gamma isozymes identified in mammals, some eukaryotic PI-PLC-gamma homologs have been classified with this subfamily. Length = 229 |
| >gnl|CDD|176539 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 7e-37
Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
DMT P+SHYFI + HN+YL +QL S +RALQ+G R +ELD W + V
Sbjct: 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPNGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T+T+ + + +I EYAFVASEYP+++ +E+H + Q +A+ + + G+ L
Sbjct: 60 IYHGHTLTSKISFRSVIEAINEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKE 263
+T P +E PSP LK +III K K KE
Sbjct: 120 YTEPPNEGESYLPSPHDLKGKIIIKGKKLKRRKLCKE 156
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiments show both, PRIP-1 and PRIP-2, are involved in InsP3-mediated calcium signaling pathway and GABA(A)receptor-mediated signaling pathway. In addition, PRIP-2 acts as a negative regulator of B-cell receptor signaling and immune responses. Length = 260 |
| >gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 2e-33
Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 16/157 (10%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR-ALQKGVRVIELDIWPNSKKDNV 166
+ DM P+SHYFI + HN+YLTG Q S V + R L G R IELD W +D
Sbjct: 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGK-SSVEMYRQVLLSGCRCIELDCWDGKGEDEE 59
Query: 167 DVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225
++ HG TM + + +I E AF SEYPV+++ E+H + QAK+AE + G+
Sbjct: 60 PIITHGKTMCTEILFKDVIEAIAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGD 119
Query: 226 ILFT---------PGSECLKEFPSPESLKRRIIISTK 253
+L T PG PSP LKR+I+I K
Sbjct: 120 LLLTEPLEKYPLEPG----VPLPSPNDLKRKILIKNK 152
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257 |
| >gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 3e-33
Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YLTG+QL S R LQ G R +E+D W + V
Sbjct: 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPDGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + +I +YAF+ +EYPV++++E+H + Q K+A+ + + LG+ L
Sbjct: 60 VHHGYTLTSKILFRDVIETINKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKL 119
Query: 228 ---FTPGSECLKEFPSPESLKRRIIISTKP 254
+ K+ PSP+SLK +I+I K
Sbjct: 120 DLSSVISGDS-KQLPSPQSLKGKILIKGKK 148
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are two PI-PLC-eta isozymes (1-2), both neuron-specific enzymes. They function as calcium sensors that are activated by small increases in intracellular calcium concentrations. The PI-PLC-eta isozymes are also activated through GPCR stimulation. Aside from the PI-PLC-eta isozymes identified in mammals, their eukaryotic homologs are also present in this family. Length = 227 |
| >gnl|CDD|215891 pfam00387, PI-PLC-Y, Phosphatidylinositol-specific phospholipase C, Y domain | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 4e-33
Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S SE + + + + V+ +R L R+YPKG+RVDSSNY+P W+ G QMVA N Q
Sbjct: 30 SFSETKAKKLLKESPAEFVKHNRRQLSRVYPKGLRVDSSNYDPQPFWNAGCQMVALNWQ- 88
Query: 416 IEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFL 456
T D + L MF NG CGYV KP FL
Sbjct: 89 ----------TPD---LGMQLNEAMFADNGRCGYVLKPEFL 116
|
This associates with pfam00388 to form a single structural unit. Length = 117 |
| >gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Score = 127 bits (319), Expect = 5e-33
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DM P+SHY + + HN+YL +QL S IRAL KG R +ELD W ++ +
Sbjct: 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T T+ + LR+I++YAF AS YPV+++LE+H + + Q +A + LG IL
Sbjct: 60 IYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPIL 119
Query: 228 FT-PGSECLKEFPSPESLKRRIIISTKPPK 256
P PSPE LK +I++ K K
Sbjct: 120 LDQPLDGVTTSLPSPEQLKGKILLKGKKLK 149
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1and 3 from the cell nucleus. Experiments show PI-PLC-delta1 is essential for normal hair formation. Length = 258 |
| >gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 1e-32
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 15/95 (15%)
Query: 351 KVRRLSLSEQQLENAVGT-YGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMV 409
V R SLSE QL+ + + D++ FTQ+NLLR+YP G+R+ SSNY+P++ W HGAQMV
Sbjct: 148 PVIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMV 207
Query: 410 AFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRAN 444
A NMQ G+ R LWL G FRAN
Sbjct: 208 ALNMQ--------------GYDRPLWLNRGKFRAN 228
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228 |
| >gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 4e-31
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
DM+ P++HYFI + HN+YLT +Q+ S +RA +G R +ELD W + V
Sbjct: 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPGGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
+ HG T+T+ + +++++++AF AS YPV+++LE+H + QA +A + LG++L
Sbjct: 60 IYHGHTLTSKILFRDVIQAVRQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDML 119
Query: 228 FTP--GSECLKEFPSPESLKRRIIISTK 253
T S +E PSPE LK R+++ K
Sbjct: 120 VTQPLDSLNPEELPSPEELKGRVLVKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus. Length = 258 |
| >gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 1e-30
Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 4/169 (2%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
+M P+SHY+I + HN+YLTG+Q +S+ S R L+ G R IELD W D + V+
Sbjct: 3 EMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGP--DGMPVI 60
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILF 228
HG T+T ++ L +IKE+AFV SEYP+++++EDH + Q +A+ + G++L
Sbjct: 61 YHGHTLTTKIKFSDVLHTIKEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLL 120
Query: 229 T-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 276
T P PSP LKR+I+I K + + E + E R KG
Sbjct: 121 TKPVDINADGLPSPNQLKRKILIKHKKLYRDMSSFPETKAEKYVNRSKG 169
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma1, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma1 is ubiquitously expressed. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Length = 229 |
| >gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 1e-29
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR-ALQKGVRVIELDIWPNSKKDNV 166
+ DM P++HYFI + HN+YLTG Q S V + R L G R IELD W +D
Sbjct: 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGK-SSVEMYRQVLLAGCRCIELDCWDGKGEDQE 59
Query: 167 DVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225
++ HG M + +++IK+ AFV S+YPV+++ E+H + Q K+A+ + G+
Sbjct: 60 PIITHGKAMCTDILFKDVIQAIKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGD 119
Query: 226 ILFT---------PGSECLKEFPSPESLKRRIIISTK 253
+L T PG PSP LKR+I+I K
Sbjct: 120 LLLTKPLESHPLEPG----VPLPSPNKLKRKILIKNK 152
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta4 is expressed in high concentrations in cerebellar Purkinje and granule cells, the median geniculate body, and the lateral geniculate nucleus. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 257 |
| >gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 2e-28
Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DM P+SHY+I + HN+YLTG+QL S+ S IR L+ G R IELD W + +
Sbjct: 3 DMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPDGKPI-IY 61
Query: 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE-ILF 228
HG T T ++ +++IK++AFV SEYPV++++E+H + + Q +A++ + G+ +L
Sbjct: 62 HGWTRTTKIKFDDVVQAIKDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLM 121
Query: 229 TPGSECLKEFPSPESLKRRIIISTK 253
P + PSP LK +III K
Sbjct: 122 KPLEASADQLPSPTQLKEKIIIKHK 146
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma2, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma2 is highly expressed in cells of hematopoietic origin. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Unlike PI-PLC-gamma1, the activation of PI-PLC-gamma2 may require concurrent stimulation of PI 3-kinase. Length = 254 |
| >gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 3e-28
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S SE + + + V++ +R L R+YPKG RVDSSNYNP W+ G QMVA N Q
Sbjct: 152 SFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQ- 210
Query: 416 IEEGIEVNFLTGDGHGRSLWLMHGMFRAN 444
+ L G F N
Sbjct: 211 -------------TPDLPMQLNQGKFEQN 226
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226 |
| >gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 8e-28
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DM P+S YFI + HN+YL +QL + AL+KG R +E+D W + + V
Sbjct: 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGADNEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + + ++++YAF S+YPVV++LE+H + + Q +A + LGE L
Sbjct: 60 VYHGYTLTSKILFKEVITTVEKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKL 119
Query: 228 FTP--GSECLKEFPSPESLKRRIIISTK 253
E PSPE+LK +I++ K
Sbjct: 120 LRAPIDDPATGELPSPEALKFKILVKNK 147
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PLC-zeta isozyme (1). PLC-zeta plays a fundamental role in vertebrate fertilization by initiating intracellular calcium oscillations that trigger the embryo development. However, the mechanism of its activation still remains unclear. Aside from PI-PLC-zeta identified in mammals, its eukaryotic homologs have been classified with this family. Length = 257 |
| >gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 2e-27
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+SHYFI + HN+YL+G+QL S LQ G R +E+D W + +
Sbjct: 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI- 226
V HG T+T+ + + +I +YAF+ +EYPV++++E+H + Q K+A+ +T+ LG+
Sbjct: 60 VHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKL 119
Query: 227 -LFTPGSECLKEFPSPESLKRRIIISTKP 254
L + S PSPE LK +I++ K
Sbjct: 120 DLSSVISNDCTRLPSPEILKGKILVKGKK 148
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta2 is a neuron-specific enzyme and expressed in the brain. It may in part function downstream of G-protein-coupled receptors and play an important role in the formation and maintenance of the neuronal network in the postnatal brain. Length = 254 |
| >gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DMT P+ HYFI + HN+YL +QL S IRAL++G R +E+D+W + +
Sbjct: 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPNGEPI- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T T+ + + ++ +YAF S+YPV+++LE+H + Q +A+ +T+ LGE L
Sbjct: 60 VYHGHTFTSKILFKDVVAAVAQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKL 119
Query: 228 F--TPGSECLKEFPSPESLKRRIIISTK 253
T + PSPE L+ +I++ K
Sbjct: 120 LSTTLDGVLPTQLPSPEELRGKILLKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 1 and 3, a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus, is not present in PI-PLC-delta4. Experiments show PI-PLC-delta4 is required for the acrosome reaction in fertilization. Length = 258 |
| >gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
D+ P+S+Y+I + HN+YLTG+QL + S + L G R +ELD W + +
Sbjct: 3 DLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCW-DGDDGMPIIY 61
Query: 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229
HG T+T + + +I AF+ S+YPV++++E+H + Q K+AE+ GE L T
Sbjct: 62 HGHTLTTKIPFKDVVEAINRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVT 121
Query: 230 PGSECLKE--------FPSPESLKRRIIISTKPPKE 257
+ L E PSP LK +I++ K E
Sbjct: 122 ---KFLFESDFSDDPSLPSPLQLKNKILLKNKKAPE 154
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and two predicted RA (Ras association) domains that are implicated in the binding of small GTPases, such as Ras or Rap, from the Ras family. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PI-PLC-epsilon isozyme (1). PI-PLC-epsilon is activated by G alpha(12/13), G beta gamma, and activated members of Ras and Rho small GTPases. Aside from PI-PLC-epsilon identified in mammals, its eukaryotic homologs have been classified with this family. Length = 254 |
| >gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 7e-25
Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 5/149 (3%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
+ DM P+ +YFI + HN+YLTG+QL S R LQ G R +E+D W + V
Sbjct: 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPDGEPV- 59
Query: 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEIL 227
V HG T+T+ + + +I +YAFV +E+PV++++E+H + Q K+A+ + + G+ L
Sbjct: 60 VHHGYTLTSKITFRDVIETINKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKL 119
Query: 228 ---FTPGSECLKEFPSPESLKRRIIISTK 253
+ K+ PSP+ LK +I++ K
Sbjct: 120 DLSSVLTGDP-KQLPSPQLLKGKILVKGK 147
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta1 is a neuron-specific enzyme and expressed in only nerve tissues such as the brain and spinal cord. It may perform a fundamental role in the brain. Length = 253 |
| >gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 4e-24
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 19/184 (10%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167
H DMT P++HYFI + HN+YLT Q + S + L G R +ELD W D
Sbjct: 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEP 60
Query: 168 VL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGE 225
++ HG TMT + + +I E AF S YPV+++ E+H+ +P QAK+AE G+
Sbjct: 61 IITHGFTMTTEILFKDAIEAIAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGD 120
Query: 226 ILFTPGSECLKEF--------PSPESLKRRIIISTKPPKE------YLEAKEEKEKENDS 271
+L T E L+++ PSPE L+ +I+I K +E Y++ + E +
Sbjct: 121 MLLT---EPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEEMSSLVNYIQPTKFVSFEFSA 177
Query: 272 QRGK 275
Q+ +
Sbjct: 178 QKNR 181
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta2 is expressed at highest levels in cells of hematopoietic origin. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 261 |
| >gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 7e-22
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 18/180 (10%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DM P+SHYFI + HN+YLT QL S + L G R IELD W + +
Sbjct: 3 DMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFI 62
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 227
HG TMT + + +I E AF S YPV+++ E+H+ + QAK+AE G+ L
Sbjct: 63 THGFTMTTEIPFKDVIEAIAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDAL 122
Query: 228 ---------FTPGSECLKEFPSPESLKRRIIISTKPPK---EYLEAKEEKEKENDSQRGK 275
PG + PSP+ L +I++ K Y+E + K E ++R K
Sbjct: 123 LIDPLDKYPLVPG----VQLPSPQELMGKILVKNKKMSTLVNYIEPVKFKSFEAAAKRNK 178
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta3 is widely expressed at highest levels in brain, liver, and parotid gland. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 258 |
| >gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Score = 92.1 bits (228), Expect = 7e-21
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DM+ P+SHYFI + HN+YLT QL + S + L G R +ELD W + V+
Sbjct: 3 DMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVI 62
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 227
HG TMT + + + +I E AF S +P++++ E+H+ +P QAK+AE G+ L
Sbjct: 63 THGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDAL 122
Query: 228 FTPGSECLKEF--------PSPESLKRRIIISTK 253
E L+++ PSP L +I++ K
Sbjct: 123 LM---EPLEKYPLESGVPLPSPMDLMYKILVKNK 153
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta1 is expressed at highest levels in specific regions of the brain. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 258 |
| >gnl|CDD|215765 pfam00168, C2, C2 domain | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 2e-20
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEE 537
L+VTV + D D Y +V + G DT KKTK +++ P WNE
Sbjct: 1 LRVTVISAKNL------PPKDLNGKSDPYVKVSLGGQKKDT--KKTKVVKNTLNPVWNET 52
Query: 538 FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTC 570
F F +++PELA LRIEV++YD KDDF G+
Sbjct: 53 FTFEVTLPELAELRIEVYDYDRFGKDDFIGEVT 85
|
Length = 85 |
| >gnl|CDD|214577 smart00239, C2, Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
Score = 85.6 bits (212), Expect = 3e-20
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 536
TL V + D D Y +V + G P KKTK +++ P WNE
Sbjct: 1 TLTVKIISARNL------PPKDKGGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNE 52
Query: 537 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPL 585
FEF + PELA L IEV++ D +DDF GQ +P+S+L G R L
Sbjct: 53 TFEFEVPPPELAELEIEVYDKDRFGRDDFIGQVTIPLSDLLLGGRHEKL 101
|
Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotagmins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles. Length = 101 |
| >gnl|CDD|176497 cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C | Back alignment and domain information |
|---|
Score = 90.0 bits (223), Expect = 5e-20
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 13/174 (7%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-----CSDVPIIRALQKGVRVIELDIWPNSK 162
HH T P++HY I H++YLT Q + L G R +++ W
Sbjct: 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDG-- 58
Query: 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH--LTPDLQAKVAEMVT 220
K +++ G + L + + +I ++ ++++L++ QAK+AE
Sbjct: 59 KPEEPIIYHGPTFLDIFLKEVIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCR 118
Query: 221 QTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRG 274
G++L TP + PS E L+ +I++ + ND+
Sbjct: 119 TIFGDMLLTPPLKPTVPLPSLEDLRGKILLL----NKKNGFSGPTGSSNDTGFV 168
|
This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs. Length = 274 |
| >gnl|CDD|150071 pfam09279, efhand_like, Phosphoinositide-specific phospholipase C, efhand-like | Back alignment and domain information |
|---|
Score = 82.2 bits (204), Expect = 2e-19
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ +F +YS N G +T + L RFL E QK+ + ++E A AII+ + + +R L+
Sbjct: 2 IDELFKEYSSNKGVLTAEELRRFLNEEQKDPRLTEEQALAIIE--KYEPNEEAKKRGQLS 59
Query: 86 LEAFFKYLFGDINPPLSP 103
L+ F +YLF D N +P
Sbjct: 60 LDGFTRYLFSDENSIFNP 77
|
Members of this family are predominantly found in phosphoinositide-specific phospholipase C. They adopt a structure consisting of a core of four alpha helices, in an EF like fold, and are required for functioning of the enzyme. Length = 83 |
| >gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 4e-16
Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
S SE + V +RF QR L RIYP R+DSSN+NP W+ G Q+VA N Q
Sbjct: 152 SSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQ 211
Query: 415 EIEEGIEVNFLTGDGHGRSLWLMHGMFRAN 444
GR L L FRAN
Sbjct: 212 T--------------EGRMLQLNRAKFRAN 227
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are two PI-PLC-eta isozymes (1-2), both neuron-specific enzymes. They function as calcium sensors that are activated by small increases in intracellular calcium concentrations. The PI-PLC-eta isozymes are also activated through GPCR stimulation. Aside from the PI-PLC-eta isozymes identified in mammals, their eukaryotic homologs are also present in this family. Length = 227 |
| >gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 3e-15
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S SE + GN+ VR +R L RIYP G+R DSSNY+P W+ G Q+VA N Q
Sbjct: 183 SFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQT 242
Query: 416 IEEGIEVN 423
E +++N
Sbjct: 243 PGEEMDLN 250
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Different PI-PLC-delta isozymes have different tissue distribution and different subcellular locations. PI-PLC-delta1 is mostly a cytoplasmic protein, PI-PLC-delta3 is located in the membrane, and PI-PLC-delta4 is predominantly detected in the cell nucleus. Aside from three PI-PLC-delta isozymes identified in mammals, some eukaryotic PI-PLC-delta homologs have been classified to this CD. Length = 257 |
| >gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Score = 73.4 bits (181), Expect = 1e-14
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
SLSE+ L + + + +R+L+R+YP G R+ SSN+NPL W G QMVA N Q
Sbjct: 157 SLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQT 216
Query: 416 IEEGIEVNFLTGDGHGRSLWLMHGMFRAN 444
+ G+++N MF +
Sbjct: 217 YDLGMQLN--------------EAMFAGS 231
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes from Saccharomyces cerevisiae. Plc1p contains both highly conserved X- and Y- regions of PLC catalytic core domain, as well as a presumptive EF-hand like calcium binding motif. Experiments show that Plc1p displays calcium dependent catalytic properties with high similarity to those of the mammalian PLCs, and plays multiple roles in modulating the membrane/protein interactions in filamentation control. CaPlc1p encoded by CAPLC1 from the closely related yeast Candida albicans, an orthologue of S. cerevisiae Plc1p, is also included in this group. Like Plc1p, CaPlc1p has conserved presumptive catalytic domain, shows PLC activity when expressed in E. coli, and is involved in multiple cellular processes. There are two other gene copies of CAPLC1 in C. albicans, CAPLC2 (also named as PIPLC) and CAPLC3. Experiments show CaPlc1p is the only enzyme in C. albicans which functions as PLC. The biological functions of CAPLC2 and CAPLC3 gene products must be clearly different from CaPlc1p, but their exact roles remain unclear. Moreover, CAPLC2 and CAPLC3 gene products are more similar to extracellular bacterial PI-PLC than to the eukaryotic PI-PLC, and they are not included in this subfamily. Length = 231 |
| >gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 4e-14
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S +E + + GN+ V+ L R+YP G+R DSSNYNP W+ G QMVA N Q
Sbjct: 184 SFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQT 243
Query: 416 IEEGIEVNFLTGDGHGR 432
+++N DG R
Sbjct: 244 AGLEMDLN----DGLFR 256
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 1 and 3, a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus, is not present in PI-PLC-delta4. Experiments show PI-PLC-delta4 is required for the acrosome reaction in fertilization. Length = 258 |
| >gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 6e-13
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S +E + + + V + +R L RIYPKG RVDSSNY P I W+ G QMVA N Q
Sbjct: 183 SFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQT 242
Query: 416 IEEGIEVN 423
+ +++N
Sbjct: 243 PDLPMQLN 250
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257 |
| >gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 3e-12
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 14/76 (18%)
Query: 369 YGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGD 428
G +++ +R L R+YPKG RVDSSNY+P+ W+ G+QMVA N Q T D
Sbjct: 168 KGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQ-----------TPD 216
Query: 429 GHGRSLWLMHGMFRAN 444
+ + L +F N
Sbjct: 217 ---KPMQLNQALFMLN 229
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. There are two PI-PLC-gamma isozymes (1-2). They are activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Aside from the two PI-PLC-gamma isozymes identified in mammals, some eukaryotic PI-PLC-gamma homologs have been classified with this subfamily. Length = 229 |
| >gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 1e-11
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S +E + T + V + +R + RIYPKG RVDSSNY P I W+ G QMV+ N Q
Sbjct: 183 SFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQT 242
Query: 416 IEEGIEVN 423
+ G+++N
Sbjct: 243 PDLGMQLN 250
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta4 is expressed in high concentrations in cerebellar Purkinje and granule cells, the median geniculate body, and the lateral geniculate nucleus. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 257 |
| >gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 2e-11
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Query: 325 EYRKLIAIHAG------KPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQ 378
+++KLIAI KP K+ L+ +PD S E + + + ++++ +
Sbjct: 144 KHKKLIAIELSDLVVYCKPTSKTKDNLE-NPDFKEIRSFVETKAPSIIRQKPVQLLKYNR 202
Query: 379 RNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVN 423
+ L R+YPKG RVDSSNY+P W G+QMVA N Q ++ +++N
Sbjct: 203 KGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLN 247
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma2, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma2 is highly expressed in cells of hematopoietic origin. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Unlike PI-PLC-gamma1, the activation of PI-PLC-gamma2 may require concurrent stimulation of PI 3-kinase. Length = 254 |
| >gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 2e-11
Identities = 36/89 (40%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S SE + + +RF QR L RIYP RVDSSNYNP W+ G QMVA N Q
Sbjct: 180 SFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQS 239
Query: 416 IEEGIEVNFLTGDGHGRSLWLMHGMFRAN 444
GR L L F AN
Sbjct: 240 --------------EGRMLQLNRAKFSAN 254
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta2 is a neuron-specific enzyme and expressed in the brain. It may in part function downstream of G-protein-coupled receptors and play an important role in the formation and maintenance of the neuronal network in the postnatal brain. Length = 254 |
| >gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 3e-11
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S+ E + + + G D V TQR + RIYPKG R SSNYNP W+ G QMVA N Q
Sbjct: 183 SIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQT 242
Query: 416 IEEGIEVN 423
+ +++
Sbjct: 243 LGAPMDLQ 250
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PLC-zeta isozyme (1). PLC-zeta plays a fundamental role in vertebrate fertilization by initiating intracellular calcium oscillations that trigger the embryo development. However, the mechanism of its activation still remains unclear. Aside from PI-PLC-zeta identified in mammals, its eukaryotic homologs have been classified with this family. Length = 257 |
| >gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 3e-11
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 355 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
LS SE + V + + Q+ L RIYP R+DSSN+NPL W+ G Q+VA N Q
Sbjct: 178 LSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQ 237
Query: 415 EIEEGIEVNFLTGDGHGRSLWLMHGMFRAN 444
GR + L F N
Sbjct: 238 S--------------EGRMMQLNRAKFMVN 253
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta1 is a neuron-specific enzyme and expressed in only nerve tissues such as the brain and spinal cord. It may perform a fundamental role in the brain. Length = 253 |
| >gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 5e-11
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
SL+E + Y +V+ T+ LLR YP R+DSSN NPLI W HG Q+VA N Q
Sbjct: 180 SLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQT 239
Query: 416 IEEGIEVN 423
+ + +N
Sbjct: 240 DDLPMHLN 247
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and two predicted RA (Ras association) domains that are implicated in the binding of small GTPases, such as Ras or Rap, from the Ras family. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PI-PLC-epsilon isozyme (1). PI-PLC-epsilon is activated by G alpha(12/13), G beta gamma, and activated members of Ras and Rho small GTPases. Aside from PI-PLC-epsilon identified in mammals, its eukaryotic homologs have been classified with this family. Length = 254 |
| >gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 1e-10
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNF 424
+ V + + L RIYPKG RVDSSNY P + W+ G QMVA N Q ++ +++N
Sbjct: 200 EFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSMQINM 252
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta1 is expressed at highest levels in specific regions of the brain. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 258 |
| >gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 4e-10
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
SLSE++ + + GN VR R L R+YP G+R++S+NY+P W+ G Q+VA N Q
Sbjct: 184 SLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQT 243
Query: 416 IEEGIEVN 423
+++N
Sbjct: 244 PGYEMDLN 251
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus. Length = 258 |
| >gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 7e-10
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVN 423
+ V + ++ L RIYPKG RVDSSNY P + W+ G QMVA N Q ++ +++N
Sbjct: 200 EFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQLN 251
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta3 is widely expressed at highest levels in brain, liver, and parotid gland. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 258 |
| >gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 8e-10
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S +E + + + V + +R + RIYPKG R+DSSNY P + W+ G QMVA N Q
Sbjct: 187 SFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQT 246
Query: 416 IEEGIEVN 423
++ ++ N
Sbjct: 247 MDLPMQQN 254
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta2 is expressed at highest levels in cells of hematopoietic origin. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 261 |
| >gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 1e-09
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 356 SLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
S E + E V + G +++ +R L RIYPKG R+DSSNY+PL W G+Q+VA N Q
Sbjct: 154 SFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQ 213
Query: 415 EIEEGIEVN---FLTG 427
++ +++N F+ G
Sbjct: 214 TPDKPMQMNQALFMLG 229
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma1, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma1 is ubiquitously expressed. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Length = 229 |
| >gnl|CDD|176539 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 356 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQE 415
S SE + D V + ++ L R+YP +RVDSSNYNP W+ G Q+VA N Q
Sbjct: 186 SFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQT 245
Query: 416 IEEGIEVNF 424
+++N
Sbjct: 246 PGLMMDLNT 254
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiments show both, PRIP-1 and PRIP-2, are involved in InsP3-mediated calcium signaling pathway and GABA(A)receptor-mediated signaling pathway. In addition, PRIP-2 acts as a negative regulator of B-cell receptor signaling and immune responses. Length = 260 |
| >gnl|CDD|175973 cd00030, C2, C2 domain | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 2e-09
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557
D D Y +V + G KTK +++ P WNE FEFP+ PE L +EV +
Sbjct: 15 DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70
Query: 558 DMSEKDDFGGQTCLPVSELKQ 578
D KDDF G+ +P+SEL
Sbjct: 71 DRFSKDDFLGEVEIPLSELLD 91
|
The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 102 |
| >gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 9e-09
Identities = 24/45 (53%), Positives = 28/45 (62%)
Query: 370 GNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 414
GN VR L RIYP G R DSSNY+P+ W+ G Q+VA N Q
Sbjct: 198 GNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQ 242
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1and 3 from the cell nucleus. Experiments show PI-PLC-delta1 is essential for normal hair formation. Length = 258 |
| >gnl|CDD|176500 cd08557, PI-PLCc_bacteria_like, Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 7e-08
Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 109 HDMTAPVSHYFIYTGHNSY-------LTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS 161
P+S I HNSY S D+ I L GVR ++L + +
Sbjct: 3 LLDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDP 62
Query: 162 KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA---SEYPVVITLEDHLTPD---LQAKV 215
++ V HG + L L +K F+ SE V++ LE D ++
Sbjct: 63 DDGDLYVCHGLFLLNGQTLEDVLNEVK--DFLDAHPSE-VVILDLEHEYGGDNGEDHDEL 119
Query: 216 AEMVTQTLGEILFTP 230
++ LG+ L+ P
Sbjct: 120 DALLRDVLGDPLYRP 134
|
This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD). They are distinct from the typical eukaryotic phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11), which have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, which is closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be distinct from that of typical eukaryotic PI-PLCs. This family also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host's immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs. Length = 271 |
| >gnl|CDD|175991 cd04025, C2B_RasA1_RasA4, C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-07
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 504 DFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK 562
D + RV G +T V+KK+ P WNE FEF L + L +EV ++D+ K
Sbjct: 22 DPFVRVFYNGQTLETSVVKKSC------YPRWNEVFEFELMEGADSPLSVEVWDWDLVSK 75
Query: 563 DDFGGQTCLPVSELKQ 578
+DF G+ + L+Q
Sbjct: 76 NDFLGKVVFSIQTLQQ 91
|
RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 123 |
| >gnl|CDD|176498 cd08555, PI-PLCc_GDPD_SF, Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 6e-07
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 15/105 (14%)
Query: 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------ 176
H Y Q N+ RAL G R +ELD+ +K + V HG T+
Sbjct: 3 SHRGYSQNGQENTL---EAFYRALDAGARGLELDVRL-TKDGELVVYHGPTLDRTTAGIL 58
Query: 177 PVELIKCLRSIKEYAFVASEYPVVITLEDH----LTPDLQAKVAE 217
P L + L I +Y +Y ++++LE + AKV +
Sbjct: 59 PPTLEEVLELIADYLK-NPDYTIILSLEIKQDSPEYDEFLAKVLK 102
|
The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols that are major sources of carbon and phosphate. Both, PI-PLCs and GP-GDEs, can hydrolyze the 3'-5' phosphodiester bonds in different substrates, and utilize a similar mechanism of general base and acid catalysis with conserved histidine residues, which consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81, glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs). The residues essential for enzyme activities and metal binding are not conserved in these sequence homologs, which might suggest that the function of catalytic domains in these proteins might be distinct from those in typical PLC-like phosphodiesterases. Length = 179 |
| >gnl|CDD|175992 cd04026, C2_PKC_alpha_gamma, C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 3e-06
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 515 PADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-ELALLRIEVHEYDMSEKDDFGGQTCLPV 573
P + +KTKT++ P WNE F F L + L IEV ++D + ++DF G V
Sbjct: 46 PKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEVWDWDRTTRNDFMGSLSFGV 105
Query: 574 SEL 576
SEL
Sbjct: 106 SEL 108
|
A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-I topology. Length = 131 |
| >gnl|CDD|176005 cd04040, C2D_Tricalbin-like, C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 7e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL---K 577
KTL P WNE FE P+ A+L++EV+++D KDD G + +S+L +
Sbjct: 38 TIKKTLN----PVWNESFEVPVPSRVRAVLKVEVYDWDRGGKDDLLGSAYIDLSDLEPEE 93
Query: 578 QGIRAVPLHDRKGERYKSVKL 598
+PL + G + +V L
Sbjct: 94 TTELTLPLDGQGGGKLGAVFL 114
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the fifth C2 repeat, C2E, and has a type-II topology. Length = 115 |
| >gnl|CDD|176057 cd08675, C2B_RasGAP, C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 6e-05
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 504 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELA 548
D +ARV + T K+TK + P ++E F F L++ E +
Sbjct: 20 DPFARV-TLNYSSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEEEDLEKS 78
Query: 549 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 578
LR+E+ M DDF G+ +P+ L+Q
Sbjct: 79 ELRVELWHASMVSGDDFLGEVRIPLQGLQQ 108
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-I topology. Length = 137 |
| >gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 7e-05
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 522 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 579
KTK ++ P WNEEF + +L I V+++D EK+D G + +S+L+ G
Sbjct: 1076 KTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVNDWDSGEKNDLLGTAEIDLSKLEPG 1133
|
Length = 1227 |
| >gnl|CDD|176007 cd04042, C2A_MCTP_PRT, C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 4e-04
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 522 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-- 579
K+KT+ N P W+E+F P+ L I+V +YD DDF G + +S L+
Sbjct: 36 KSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFDYDRGLTDDFMGSAFVDLSTLELNKP 94
Query: 580 -IRAVPLHDRKGERYKSVKLL 599
+ L D + L
Sbjct: 95 TEVKLKLEDPNSDEDLGYISL 115
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-II topology. Length = 121 |
| >gnl|CDD|175998 cd04032, C2_Perforin, C2 domain of Perforin | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 473 PAKK---TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN 529
P ++ TL VTV G + D+ ++ D Y +V G K+T+ + +N
Sbjct: 22 PTRRGLATLTVTVLRATGLWGDY-------FTSTDGYVKVFFGGQ-----EKRTEVIWNN 69
Query: 530 WIPSWNEEFEF-PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 581
P WN F+F + + LR EV + D DD G TC + G+
Sbjct: 70 NNPRWNATFDFGSVELSPGGKLRFEVWDRDNGWDDDLLG-TC--SVVPEAGVH 119
|
Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 127 |
| >gnl|CDD|176019 cd08373, C2A_Ferlin, C2 domain first repeat in Ferlin | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 503 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL-ALLRIEVHEYDMS 560
D A+V GV KKT+ LE+ P WNE FE+PL P+ L I V +Y+
Sbjct: 15 GDRIAKVTFRGVK-----KKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEKV 69
Query: 561 EKDDFGGQTCLPVSEL 576
++ G + + +L
Sbjct: 70 GRNRLIGSATVSLQDL 85
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-II topology. Length = 127 |
| >gnl|CDD|176037 cd08391, C2A_C2C_Synaptotagmin_like, C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 522 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGI 580
K+K +++N P WNE +E + L IE+ + D +KDDF G+ + + K+G
Sbjct: 42 KSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFDEDP-DKDDFLGRLSIDLGSVEKKGF 100
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains either the first or third repeat in Synaptotagmin-like proteins with a type-I topology. Length = 121 |
| >gnl|CDD|176003 cd04038, C2_ArfGAP, C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELAL-LRIEVHEYDMSEKDDFGG 567
KT+ ++ N P WNEE SVP L++EV + D KDD G
Sbjct: 35 VKTRVIKKNLNPVWNEELTL--SVPNPMAPLKLEVFDKDTFSKDDSMG 80
|
ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 145 |
| >gnl|CDD|175975 cd00276, C2B_Synaptotagmin, C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.002
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 498 DAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIE 553
D D Y +V + + KKT + P +NE F F + +L L I
Sbjct: 30 DGKGLSDPYVKVSL--LQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87
Query: 554 VHEYDMSEKDDFGGQTCL 571
V + D +++ GQ L
Sbjct: 88 VVDKDSVGRNEVIGQVVL 105
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 134 |
| >gnl|CDD|175996 cd04030, C2C_KIAA1228, C2 domain third repeat present in uncharacterized human KIAA1228-like proteins | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.003
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554
+KT +DN P ++E FEFP+S+ EL ++V
Sbjct: 55 RKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88
|
KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the third C2 repeat, C2C, and has a type-II topology. Length = 127 |
| >gnl|CDD|175990 cd04024, C2A_Synaptotagmin-like, C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Score = 37.4 bits (87), Expect = 0.004
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 522 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLP------VSE 575
KT+T+ + P WN EFP+ + LL++ + + D D+ G+ + +
Sbjct: 38 KTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLILWDKDRFAGKDYLGEFDIALEEVFADGK 97
Query: 576 LKQGIRAVPLHDRKGERYKSVKLLMHFEF 604
Q + + L + + V +H +F
Sbjct: 98 TGQSDKWITLKSTRPGKTSVVSGEIHLQF 126
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-I topology. Length = 128 |
| >gnl|CDD|176030 cd08384, C2B_Rabphilin_Doc2, C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.004
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 522 KTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGG 567
K KTL P +NEEF + + +LA L I V + D+ + +D+ G
Sbjct: 57 KKKTLN----PEFNEEFFYDIKHSDLAKKTLEITVWDKDIGKSNDYIG 100
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 133 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 605 | |||
| PLN02230 | 598 | phosphoinositide phospholipase C 4 | 100.0 | |
| PLN02222 | 581 | phosphoinositide phospholipase C 2 | 100.0 | |
| PLN02228 | 567 | Phosphoinositide phospholipase C | 100.0 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 100.0 | |
| PLN02952 | 599 | phosphoinositide phospholipase C | 100.0 | |
| PLN02223 | 537 | phosphoinositide phospholipase C | 100.0 | |
| KOG1265 | 1189 | consensus Phospholipase C [Lipid transport and met | 100.0 | |
| KOG1264 | 1267 | consensus Phospholipase C [Lipid transport and met | 100.0 | |
| cd08629 | 258 | PI-PLCc_delta1 Catalytic domain of metazoan phosph | 100.0 | |
| cd08633 | 254 | PI-PLCc_eta2 Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08630 | 258 | PI-PLCc_delta3 Catalytic domain of metazoan phosph | 100.0 | |
| cd08595 | 257 | PI-PLCc_zeta Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08624 | 261 | PI-PLCc_beta2 Catalytic domain of metazoan phospho | 100.0 | |
| cd08632 | 253 | PI-PLCc_eta1 Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08631 | 258 | PI-PLCc_delta4 Catalytic domain of metazoan phosph | 100.0 | |
| cd08596 | 254 | PI-PLCc_epsilon Catalytic domain of metazoan phosp | 100.0 | |
| cd08626 | 257 | PI-PLCc_beta4 Catalytic domain of metazoan phospho | 100.0 | |
| cd08623 | 258 | PI-PLCc_beta1 Catalytic domain of metazoan phospho | 100.0 | |
| cd08591 | 257 | PI-PLCc_beta Catalytic domain of metazoan phosphoi | 100.0 | |
| cd08593 | 257 | PI-PLCc_delta Catalytic domain of metazoan phospho | 100.0 | |
| cd08625 | 258 | PI-PLCc_beta3 Catalytic domain of metazoan phospho | 100.0 | |
| cd08594 | 227 | PI-PLCc_eta Catalytic domain of metazoan phosphoin | 100.0 | |
| cd08628 | 254 | PI-PLCc_gamma2 Catalytic domain of metazoan phosph | 100.0 | |
| cd08597 | 260 | PI-PLCc_PRIP_metazoa Catalytic domain of metazoan | 100.0 | |
| cd08558 | 226 | PI-PLCc_eukaryota Catalytic domain of eukaryotic p | 100.0 | |
| cd08598 | 231 | PI-PLC1c_yeast Catalytic domain of putative yeast | 100.0 | |
| cd08627 | 229 | PI-PLCc_gamma1 Catalytic domain of metazoan phosph | 100.0 | |
| cd08592 | 229 | PI-PLCc_gamma Catalytic domain of metazoan phospho | 100.0 | |
| cd08599 | 228 | PI-PLCc_plant Catalytic domain of plant phosphatid | 100.0 | |
| cd00137 | 274 | PI-PLCc Catalytic domain of prokaryotic and eukary | 100.0 | |
| smart00149 | 115 | PLCYc Phospholipase C, catalytic domain (part); do | 100.0 | |
| PF00387 | 118 | PI-PLC-Y: Phosphatidylinositol-specific phospholip | 100.0 | |
| smart00148 | 135 | PLCXc Phospholipase C, catalytic domain (part); do | 100.0 | |
| PF00388 | 146 | PI-PLC-X: Phosphatidylinositol-specific phospholip | 100.0 | |
| cd08589 | 324 | PI-PLCc_SaPLC1_like Catalytic domain of Streptomyc | 99.87 | |
| cd00275 | 128 | C2_PLC_like C2 domain present in Phosphoinositide- | 99.81 | |
| cd08590 | 267 | PI-PLCc_Rv2075c_like Catalytic domain of uncharact | 99.76 | |
| cd08395 | 120 | C2C_Munc13 C2 domain third repeat in Munc13 (mamma | 99.72 | |
| cd08682 | 126 | C2_Rab11-FIP_classI C2 domain found in Rab11-famil | 99.66 | |
| cd04036 | 119 | C2_cPLA2 C2 domain present in cytosolic PhosphoLip | 99.66 | |
| cd08677 | 118 | C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a | 99.65 | |
| cd08557 | 271 | PI-PLCc_bacteria_like Catalytic domain of bacteria | 99.64 | |
| cd04042 | 121 | C2A_MCTP_PRT C2 domain first repeat found in Multi | 99.64 | |
| cd08381 | 122 | C2B_PI3K_class_II C2 domain second repeat present | 99.63 | |
| cd08406 | 136 | C2B_Synaptotagmin-12 C2 domain second repeat prese | 99.63 | |
| cd04016 | 121 | C2_Tollip C2 domain present in Toll-interacting pr | 99.62 | |
| cd04022 | 127 | C2A_MCTP_PRT_plant C2 domain first repeat found in | 99.61 | |
| cd08377 | 119 | C2C_MCTP_PRT C2 domain third repeat found in Multi | 99.61 | |
| cd04019 | 150 | C2C_MCTP_PRT_plant C2 domain third repeat found in | 99.61 | |
| cd08379 | 126 | C2D_MCTP_PRT_plant C2 domain fourth repeat found i | 99.61 | |
| cd04015 | 158 | C2_plant_PLD C2 domain present in plant phospholip | 99.6 | |
| cd04029 | 125 | C2A_SLP-4_5 C2 domain first repeat present in Syna | 99.6 | |
| cd08393 | 125 | C2A_SLP-1_2 C2 domain first repeat present in Syna | 99.59 | |
| cd08692 | 135 | C2B_Tac2-N C2 domain second repeat found in Tac2-N | 99.58 | |
| cd04010 | 148 | C2B_RasA3 C2 domain second repeat present in RAS p | 99.58 | |
| cd04033 | 133 | C2_NEDD4_NEDD4L C2 domain present in the Human neu | 99.58 | |
| cd08392 | 128 | C2A_SLP-3 C2 domain first repeat present in Synapt | 99.58 | |
| cd08407 | 138 | C2B_Synaptotagmin-13 C2 domain second repeat prese | 99.57 | |
| cd04028 | 146 | C2B_RIM1alpha C2 domain second repeat contained in | 99.57 | |
| cd04041 | 111 | C2A_fungal C2 domain first repeat; fungal group. C | 99.56 | |
| cd08681 | 118 | C2_fungal_Inn1p-like C2 domain found in fungal Ing | 99.56 | |
| cd08376 | 116 | C2B_MCTP_PRT C2 domain second repeat found in Mult | 99.56 | |
| cd08378 | 121 | C2B_MCTP_PRT_plant C2 domain second repeat found i | 99.55 | |
| cd04039 | 108 | C2_PSD C2 domain present in Phosphatidylserine dec | 99.55 | |
| cd08404 | 136 | C2B_Synaptotagmin-4 C2 domain second repeat presen | 99.55 | |
| cd04031 | 125 | C2A_RIM1alpha C2 domain first repeat contained in | 99.54 | |
| cd08400 | 126 | C2_Ras_p21A1 C2 domain present in RAS p21 protein | 99.54 | |
| cd08680 | 124 | C2_Kibra C2 domain found in Human protein Kibra. K | 99.53 | |
| cd08402 | 136 | C2B_Synaptotagmin-1 C2 domain second repeat presen | 99.53 | |
| cd08678 | 126 | C2_C21orf25-like C2 domain found in the Human chro | 99.52 | |
| cd08375 | 136 | C2_Intersectin C2 domain present in Intersectin. A | 99.52 | |
| cd04050 | 105 | C2B_Synaptotagmin-like C2 domain second repeat pre | 99.52 | |
| cd08385 | 124 | C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe | 99.52 | |
| cd04040 | 115 | C2D_Tricalbin-like C2 domain fourth repeat present | 99.52 | |
| cd08373 | 127 | C2A_Ferlin C2 domain first repeat in Ferlin. Ferli | 99.51 | |
| cd04025 | 123 | C2B_RasA1_RasA4 C2 domain second repeat present in | 99.51 | |
| cd04030 | 127 | C2C_KIAA1228 C2 domain third repeat present in unc | 99.51 | |
| cd08384 | 133 | C2B_Rabphilin_Doc2 C2 domain second repeat present | 99.51 | |
| KOG1030 | 168 | consensus Predicted Ca2+-dependent phospholipid-bi | 99.51 | |
| cd08685 | 119 | C2_RGS-like C2 domain of the Regulator Of G-Protei | 99.5 | |
| cd08688 | 110 | C2_KIAA0528-like C2 domain found in the Human KIAA | 99.5 | |
| cd08382 | 123 | C2_Smurf-like C2 domain present in Smad ubiquitina | 99.5 | |
| cd08387 | 124 | C2A_Synaptotagmin-8 C2A domain first repeat presen | 99.49 | |
| cd04018 | 151 | C2C_Ferlin C2 domain third repeat in Ferlin. Ferli | 99.49 | |
| cd08403 | 134 | C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe | 99.49 | |
| cd08521 | 123 | C2A_SLP C2 domain first repeat present in Synaptot | 99.49 | |
| cd08410 | 135 | C2B_Synaptotagmin-17 C2 domain second repeat prese | 99.49 | |
| cd04024 | 128 | C2A_Synaptotagmin-like C2 domain first repeat pres | 99.49 | |
| cd08388 | 128 | C2A_Synaptotagmin-4-11 C2A domain first repeat pre | 99.48 | |
| cd04043 | 126 | C2_Munc13_fungal C2 domain in Munc13 (mammalian un | 99.48 | |
| cd08405 | 136 | C2B_Synaptotagmin-7 C2 domain second repeat presen | 99.48 | |
| cd04011 | 111 | C2B_Ferlin C2 domain second repeat in Ferlin. Ferl | 99.47 | |
| cd08391 | 121 | C2A_C2C_Synaptotagmin_like C2 domain first and thi | 99.47 | |
| cd04032 | 127 | C2_Perforin C2 domain of Perforin. Perforin contai | 99.47 | |
| cd04051 | 125 | C2_SRC2_like C2 domain present in Soybean genes Re | 99.46 | |
| cd04027 | 127 | C2B_Munc13 C2 domain second repeat in Munc13 (mamm | 99.46 | |
| cd08401 | 121 | C2A_RasA2_RasA3 C2 domain first repeat present in | 99.46 | |
| cd04009 | 133 | C2B_Munc13-like C2 domain second repeat in Munc13 | 99.46 | |
| PF09279 | 83 | EF-hand_like: Phosphoinositide-specific phospholip | 99.45 | |
| cd08389 | 124 | C2A_Synaptotagmin-14_16 C2A domain first repeat pr | 99.45 | |
| cd04054 | 121 | C2A_Rasal1_RasA4 C2 domain first repeat present in | 99.45 | |
| cd04017 | 135 | C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl | 99.45 | |
| cd08386 | 125 | C2A_Synaptotagmin-7 C2A domain first repeat presen | 99.44 | |
| cd04046 | 126 | C2_Calpain C2 domain present in Calpain proteins. | 99.44 | |
| cd00276 | 134 | C2B_Synaptotagmin C2 domain second repeat present | 99.44 | |
| cd04014 | 132 | C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) | 99.43 | |
| cd08390 | 123 | C2A_Synaptotagmin-15-17 C2A domain first repeat pr | 99.43 | |
| cd04048 | 120 | C2A_Copine C2 domain first repeat in Copine. There | 99.43 | |
| cd08409 | 137 | C2B_Synaptotagmin-15 C2 domain second repeat prese | 99.42 | |
| cd04020 | 162 | C2B_SLP_1-2-3-4 C2 domain second repeat present in | 99.42 | |
| cd04026 | 131 | C2_PKC_alpha_gamma C2 domain in Protein Kinase C ( | 99.42 | |
| cd04044 | 124 | C2A_Tricalbin-like C2 domain first repeat present | 99.42 | |
| cd08690 | 155 | C2_Freud-1 C2 domain found in 5' repressor element | 99.41 | |
| cd08408 | 138 | C2B_Synaptotagmin-14_16 C2 domain second repeat pr | 99.41 | |
| cd04035 | 123 | C2A_Rabphilin_Doc2 C2 domain first repeat present | 99.4 | |
| cd04037 | 124 | C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferli | 99.38 | |
| cd08691 | 137 | C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li | 99.36 | |
| cd04038 | 145 | C2_ArfGAP C2 domain present in Arf GTPase Activati | 99.36 | |
| cd08675 | 137 | C2B_RasGAP C2 domain second repeat of Ras GTPase a | 99.35 | |
| cd08686 | 118 | C2_ABR C2 domain in the Active BCR (Breakpoint clu | 99.33 | |
| cd04045 | 120 | C2C_Tricalbin-like C2 domain third repeat present | 99.32 | |
| cd04049 | 124 | C2_putative_Elicitor-responsive_gene C2 domain pre | 99.31 | |
| PLN03008 | 868 | Phospholipase D delta | 99.3 | |
| cd08394 | 127 | C2A_Munc13 C2 domain first repeat in Munc13 (mamma | 99.29 | |
| cd04013 | 146 | C2_SynGAP_like C2 domain present in Ras GTPase act | 99.29 | |
| cd08676 | 153 | C2A_Munc13-like C2 domain first repeat in Munc13 ( | 99.28 | |
| cd04021 | 125 | C2_E3_ubiquitin_ligase C2 domain present in E3 ubi | 99.28 | |
| PF00168 | 85 | C2: C2 domain; InterPro: IPR000008 The C2 domain i | 99.27 | |
| cd08383 | 117 | C2A_RasGAP C2 domain (first repeat) of Ras GTPase | 99.27 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.26 | |
| cd04052 | 111 | C2B_Tricalbin-like C2 domain second repeat present | 99.24 | |
| cd08555 | 179 | PI-PLCc_GDPD_SF Catalytic domain of phosphoinositi | 99.23 | |
| cd04047 | 110 | C2B_Copine C2 domain second repeat in Copine. Ther | 99.2 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 99.17 | |
| smart00239 | 101 | C2 Protein kinase C conserved region 2 (CalB). Ca2 | 99.12 | |
| PLN03200 | 2102 | cellulose synthase-interactive protein; Provisiona | 99.03 | |
| cd08374 | 133 | C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferli | 98.99 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 98.93 | |
| cd00030 | 102 | C2 C2 domain. The C2 domain was first identified i | 98.9 | |
| PLN02270 | 808 | phospholipase D alpha | 98.87 | |
| cd08586 | 279 | PI-PLCc_BcPLC_like Catalytic domain of Bacillus ce | 98.87 | |
| KOG1028 | 421 | consensus Ca2+-dependent phospholipid-binding prot | 98.84 | |
| cd08588 | 270 | PI-PLCc_At5g67130_like Catalytic domain of Arabido | 98.83 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 98.74 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 98.4 | |
| PLN02352 | 758 | phospholipase D epsilon | 98.33 | |
| cd08689 | 109 | C2_fungal_Pkc1p C2 domain found in protein kinase | 97.96 | |
| COG5038 | 1227 | Ca2+-dependent lipid-binding protein, contains C2 | 97.96 | |
| KOG1011 | 1283 | consensus Neurotransmitter release regulator, UNC- | 97.95 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 97.81 | |
| KOG1031 | 1169 | consensus Predicted Ca2+-dependent phospholipid-bi | 97.77 | |
| KOG0905 | 1639 | consensus Phosphoinositide 3-kinase [Signal transd | 97.64 | |
| cd08622 | 276 | PI-PLCXDc_CG14945_like Catalytic domain of Drosoph | 97.63 | |
| cd08587 | 288 | PI-PLCXDc_like Catalytic domain of phosphatidylino | 97.52 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 97.45 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 97.13 | |
| cd08683 | 143 | C2_C2cd3 C2 domain found in C2 calcium-dependent d | 97.0 | |
| cd08398 | 158 | C2_PI3K_class_I_alpha C2 domain present in class I | 96.98 | |
| cd08693 | 173 | C2_PI3K_class_I_beta_delta C2 domain present in cl | 96.94 | |
| cd04012 | 171 | C2A_PI3K_class_II C2 domain first repeat present i | 96.89 | |
| cd08380 | 156 | C2_PI3K_like C2 domain present in phosphatidylinos | 96.88 | |
| cd08616 | 290 | PI-PLCXD1c Catalytic domain of phosphatidylinosito | 96.88 | |
| KOG1013 | 362 | consensus Synaptic vesicle protein rabphilin-3A [I | 96.82 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 96.59 | |
| cd08556 | 189 | GDPD Glycerophosphodiester phosphodiesterase domai | 96.59 | |
| cd08582 | 233 | GDPD_like_2 Glycerophosphodiester phosphodiesteras | 96.53 | |
| cd08562 | 229 | GDPD_EcUgpQ_like Glycerophosphodiester phosphodies | 96.51 | |
| cd08397 | 159 | C2_PI3K_class_III C2 domain present in class III p | 96.46 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 96.45 | |
| KOG1328 | 1103 | consensus Synaptic vesicle protein BAIAP3, involve | 96.37 | |
| PF03009 | 256 | GDPD: Glycerophosphoryl diester phosphodiesterase | 96.19 | |
| cd08579 | 220 | GDPD_memb_like Glycerophosphodiester phosphodieste | 96.19 | |
| cd08399 | 178 | C2_PI3K_class_I_gamma C2 domain present in class I | 96.04 | |
| cd08563 | 230 | GDPD_TtGDE_like Glycerophosphodiester phosphodiest | 95.93 | |
| cd08567 | 263 | GDPD_SpGDE_like Glycerophosphodiester phosphodiest | 95.88 | |
| cd08684 | 103 | C2A_Tac2-N C2 domain first repeat found in Tac2-N | 95.86 | |
| cd08577 | 228 | PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetic | 95.71 | |
| cd08620 | 281 | PI-PLCXDc_like_1 Catalytic domain of uncharacteriz | 95.63 | |
| PF00792 | 142 | PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: I | 95.6 | |
| cd08619 | 285 | PI-PLCXDc_plant Catalytic domain of phosphatidylin | 95.51 | |
| cd08565 | 235 | GDPD_pAtGDE_like Glycerophosphodiester phosphodies | 95.3 | |
| cd08566 | 240 | GDPD_AtGDE_like Glycerophosphodiester phosphodiest | 95.16 | |
| cd08573 | 258 | GDPD_GDE1 Glycerophosphodiester phosphodiesterase | 94.91 | |
| cd08564 | 265 | GDPD_GsGDE_like Glycerophosphodiester phosphodiest | 94.84 | |
| cd08568 | 226 | GDPD_TmGDE_like Glycerophosphodiester phosphodiest | 94.82 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 94.46 | |
| cd08584 | 192 | PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetic | 93.97 | |
| cd08575 | 264 | GDPD_GDE4_like Glycerophosphodiester phosphodieste | 93.91 | |
| cd08561 | 249 | GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodieste | 93.65 | |
| cd08574 | 252 | GDPD_GDE_2_3_6 Glycerophosphodiester phosphodieste | 93.0 | |
| cd08601 | 256 | GDPD_SaGlpQ_like Glycerophosphodiester phosphodies | 92.74 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 92.73 | |
| cd08580 | 263 | GDPD_Rv2277c_like Glycerophosphodiester phosphodie | 92.3 | |
| cd08581 | 229 | GDPD_like_1 Glycerophosphodiester phosphodiesteras | 92.19 | |
| cd08612 | 300 | GDPD_GDE4 Glycerophosphodiester phosphodiesterase | 92.17 | |
| cd08600 | 318 | GDPD_EcGlpQ_like Glycerophosphodiester phosphodies | 92.04 | |
| PRK11143 | 355 | glpQ glycerophosphodiester phosphodiesterase; Prov | 92.0 | |
| cd08607 | 290 | GDPD_GDE5 Glycerophosphodiester phosphodiesterase | 91.69 | |
| KOG2060 | 405 | consensus Rab3 effector RIM1 and related proteins, | 91.57 | |
| cd08571 | 302 | GDPD_SHV3_plant Glycerophosphodiester phosphodiest | 91.27 | |
| cd08605 | 282 | GDPD_GDE5_like_1_plant Glycerophosphodiester phosp | 91.24 | |
| cd08559 | 296 | GDPD_periplasmic_GlpQ_like Periplasmic glycerophos | 91.21 | |
| cd08609 | 315 | GDPD_GDE3 Glycerophosphodiester phosphodiesterase | 90.94 | |
| cd08606 | 286 | GDPD_YPL110cp_fungi Glycerophosphodiester phosphod | 90.72 | |
| cd08570 | 234 | GDPD_YPL206cp_fungi Glycerophosphodiester phosphod | 90.45 | |
| KOG3837 | 523 | consensus Uncharacterized conserved protein, conta | 90.28 | |
| PRK09454 | 249 | ugpQ cytoplasmic glycerophosphodiester phosphodies | 90.06 | |
| cd08602 | 309 | GDPD_ScGlpQ1_like Glycerophosphodiester phosphodie | 90.06 | |
| cd08695 | 189 | C2_Dock-B C2 domains found in Dedicator Of CytoKin | 89.93 | |
| cd05030 | 88 | calgranulins Calgranulins: S-100 domain found in p | 89.91 | |
| cd05024 | 91 | S-100A10 S-100A10: A subgroup of the S-100A10 doma | 89.68 | |
| smart00142 | 100 | PI3K_C2 Phosphoinositide 3-kinase, region postulat | 89.67 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 89.31 | |
| PTZ00268 | 380 | glycosylphosphatidylinositol-specific phospholipas | 89.24 | |
| cd08583 | 237 | PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetic | 89.11 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 88.81 | |
| cd08604 | 300 | GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodi | 88.56 | |
| KOG1326 | 1105 | consensus Membrane-associated protein FER-1 and re | 88.25 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 88.24 | |
| PF14429 | 184 | DOCK-C2: C2 domain in Dock180 and Zizimin proteins | 87.97 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 87.94 | |
| cd08572 | 293 | GDPD_GDE5_like Glycerophosphodiester phosphodieste | 87.64 | |
| cd08694 | 196 | C2_Dock-A C2 domains found in Dedicator Of CytoKin | 87.36 | |
| cd08610 | 316 | GDPD_GDE6 Glycerophosphodiester phosphodiesterase | 87.28 | |
| KOG1327 | 529 | consensus Copine [Signal transduction mechanisms] | 86.33 | |
| cd08679 | 178 | C2_DOCK180_related C2 domains found in Dedicator O | 84.96 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 84.62 | |
| PF10358 | 143 | NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; | 84.38 | |
| COG0584 | 257 | UgpQ Glycerophosphoryl diester phosphodiesterase [ | 83.67 | |
| cd08585 | 237 | GDPD_like_3 Glycerophosphodiester phosphodiesteras | 83.44 | |
| cd08560 | 356 | GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodi | 83.41 | |
| cd00051 | 63 | EFh EF-hand, calcium binding motif; A diverse supe | 83.32 | |
| cd08613 | 309 | GDPD_GDE4_like_1 Glycerophosphodiester phosphodies | 83.05 | |
| PF15627 | 156 | CEP76-C2: CEP76 C2 domain | 82.94 | |
| KOG2258 | 341 | consensus Glycerophosphoryl diester phosphodiester | 82.49 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 82.41 | |
| cd08608 | 351 | GDPD_GDE2 Glycerophosphodiester phosphodiesterase | 82.36 | |
| cd08578 | 300 | GDPD_NUC-2_fungi Putative glycerophosphodiester ph | 81.72 | |
| PTZ00183 | 158 | centrin; Provisional | 81.16 |
| >PLN02230 phosphoinositide phospholipase C 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-165 Score=1354.27 Aligned_cols=584 Identities=58% Similarity=1.010 Sum_probs=500.6
Q ss_pred CcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHHhhhhc-hhhh
Q 007399 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKED-KASKEDAQAIIDSLRELKH-LNIF 79 (605)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~-~~~~ 79 (605)
|||||||+||.|+|+.....+|+||..||.+|+.+ ..||.++|.+||+++|++. ..+.++|..||++|++..+ ....
T Consensus 7 m~~~~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 86 (598)
T PLN02230 7 MGSYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKF 86 (598)
T ss_pred CccceEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccc
Confidence 67999999999999999999999999999999876 8999999999999999654 4578999999999985432 2233
Q ss_pred ccCCCCHHHHHHHHcc-CCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEee
Q 007399 80 QRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (605)
Q Consensus 80 ~~~~l~~~gF~~~L~s-~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~W 158 (605)
.++.|+++||++||+| +.|++.. ..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||
T Consensus 87 ~~~~~~~~~F~~yL~s~~~~~~~~--~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~w 164 (598)
T PLN02230 87 TRRNLTLDDFNYYLFSTDLNPPIA--DQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLW 164 (598)
T ss_pred cccccCHHHHHHHHcCcccCCccc--ccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEecc
Confidence 4567999999999999 4555554 579999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 007399 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEF 238 (605)
Q Consensus 159 dG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~l 238 (605)
||++ ++|+|+||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++.+....|
T Consensus 165 dg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~l 243 (598)
T PLN02230 165 PRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEF 243 (598)
T ss_pred CCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCCC
Confidence 9876 579999999999999999999999999999999999999999999999999999999999999999876667889
Q ss_pred CChhhccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCC--CCCCCC-CCCCCCCc-c
Q 007399 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD--KDDFDG-GVDNDEED-S 314 (605)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~-~ 314 (605)
|||++||||||||+|++++.++.....+. +.......++++.|+.+.+.+.......+. .+..+. ...++..+ .
T Consensus 244 psP~~Lk~kilik~Kk~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 321 (598)
T PLN02230 244 PSPEELKEKILISTKPPKEYLEANDAKEK--DNGEKGKDSDEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCE 321 (598)
T ss_pred CChHHHcCCEEEEecCCcccccccccccc--cccccccccchhhhccccccccccccccccccccccccccchhcccccc
Confidence 99999999999999998776554321110 000111122233344433322211110000 000000 00000000 1
Q ss_pred ccccccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCC
Q 007399 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (605)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SS 394 (605)
..++...++++|++|++|+.+++++++..+++..|.+++++||||.++.+++++++.+|++||++||+||||+|+|+|||
T Consensus 322 ~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdSS 401 (598)
T PLN02230 322 SDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSS 401 (598)
T ss_pred ccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCCC
Confidence 11223356899999999999999999998888778888999999999999999999999999999999999999999999
Q ss_pred CCCccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCC
Q 007399 395 NYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA 474 (605)
Q Consensus 395 N~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~ 474 (605)
||||+.||++|||||||||| |+|++||||+|||+.||+|||||||++||+..+.++.|||....+.
T Consensus 402 NynP~~~W~~GcQMVALN~Q--------------t~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~ 467 (598)
T PLN02230 402 NYKPQIGWMSGAQMIAFNMQ--------------GYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCP 467 (598)
T ss_pred CCCchhHhcCceEEeeeccc--------------CCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCc
Confidence 99999999999999999999 9999999999999999999999999999997665568999987777
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+.+|+|+|++|++|+++++++..+.++++||||+|+|+|.|.|+.++||+++.|++||+|||+|+|++..||+|+|||.|
T Consensus 468 ~~~L~V~VisGq~~~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPELAllRf~V 547 (598)
T PLN02230 468 KKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALLRVEV 547 (598)
T ss_pred CcEEEEEEEEccCccCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCceeEEEEEE
Confidence 88999999999999876666666778899999999999999999999999888889999999999999999999999999
Q ss_pred EeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
+|+|..+.++|+||+|+||++|++|||||||+|..|.++.+++|||||+|.
T Consensus 548 ~d~d~~~~ddfiGQ~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 548 HEHDINEKDDFGGQTCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred EECCCCCCCCEEEEEEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 999988889999999999999999999999999999999999999999985
|
|
| >PLN02222 phosphoinositide phospholipase C 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-164 Score=1351.05 Aligned_cols=580 Identities=73% Similarity=1.243 Sum_probs=503.2
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhc
Q 007399 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ 80 (605)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 80 (605)
|++++||||+||.|+|+......|+||..||.+|++++.||.++|.+||+++|++..++.++|.+||++|+.. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~-----~~ 75 (581)
T PLN02222 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL-----LH 75 (581)
T ss_pred CCccceeEEEEeccccccccCCCcHHHHHHHHHhcCCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh-----hh
Confidence 8999999999999999999999999999999999977899999999999999999888999999999998632 23
Q ss_pred cCCCCHHHHHHHHccCCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecC
Q 007399 81 RRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPN 160 (605)
Q Consensus 81 ~~~l~~~gF~~~L~s~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG 160 (605)
+++|+++||++||+|+.|.++.+ ..|+|||++|||||||||||||||+||||.|.||+|+|++||++||||||||||||
T Consensus 76 ~~~~~~~gF~~yL~s~~n~~~~~-~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 154 (581)
T PLN02222 76 RNGLHLDAFFKYLFGDNNPPLAL-HEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPN 154 (581)
T ss_pred ccCcCHHHHHHHhcCCCCCCCcc-ccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 46799999999999999988863 57999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCC
Q 007399 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239 (605)
Q Consensus 161 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~lP 239 (605)
+++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++. +....||
T Consensus 155 ~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~lp 234 (581)
T PLN02222 155 SDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234 (581)
T ss_pred CCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCCC
Confidence 887778999999999999999999999999999999999999999999999999999999999999999874 4467999
Q ss_pred ChhhccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccc
Q 007399 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQ 319 (605)
Q Consensus 240 SP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (605)
||++||||||||+|++++.++..... ....+...+++..++.+.++......+.++.+..+..+ +++.+..++.+
T Consensus 235 sP~~Lk~kilik~K~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 309 (581)
T PLN02222 235 SPNSLKKRIIISTKPPKEYKEGKDDE----VVQKGKDLGDEEVWGREVPSFIQRNKSVDKNDSNGDDD-DDDDDGEDKSK 309 (581)
T ss_pred ChHHHCCCEEEEecCCcccccccccc----cccccccccccccccccccccccccccccccccccccc-ccccccccccc
Confidence 99999999999999987655432100 00011111222334444443322211111100000000 01111122333
Q ss_pred cccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCcc
Q 007399 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPL 399 (605)
Q Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~ 399 (605)
....+++++|++++.+++++++...++..|.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+
T Consensus 310 ~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSNynP~ 389 (581)
T PLN02222 310 KNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPL 389 (581)
T ss_pred cccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCCCCch
Confidence 45678999999999999888887777666777889999999999999999999999999999999999999999999999
Q ss_pred ccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCCcceEE
Q 007399 400 IGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLK 479 (605)
Q Consensus 400 ~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~ 479 (605)
.||++|||||||||| |+|++||||+|||+.||+|||||||++||+.......|||....|.+.+|+
T Consensus 390 ~~W~~G~QmVALN~Q--------------T~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~ 455 (581)
T PLN02222 390 VGWSHGAQMVAFNMQ--------------GYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLR 455 (581)
T ss_pred hHhcCCcEEeecccc--------------CCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEE
Confidence 999999999999999 999999999999999999999999999998765555799998888888999
Q ss_pred EEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccC
Q 007399 480 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 559 (605)
Q Consensus 480 V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~ 559 (605)
|+|++|++|++++++...+.++++||||+|+|.|.|.|..++||+++.+|+||+|||+|+|.+..||+|+|||.|+|+|.
T Consensus 456 V~Visgq~~~l~~~~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAllRf~V~d~D~ 535 (581)
T PLN02222 456 VTIYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDM 535 (581)
T ss_pred EEEEEcccccCCCCccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEEEEEEEECCC
Confidence 99999999876656665677789999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 560 SEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 560 ~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
.+.++|+||+++||++|++|||||||+|..|+++.+|+|||||+|.
T Consensus 536 ~~~ddfigq~~lPv~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 536 SEKDDFGGQTCLPVWELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred CCCCcEEEEEEcchhhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 7889999999999999999999999999999999999999999984
|
|
| >PLN02228 Phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-159 Score=1309.90 Aligned_cols=559 Identities=56% Similarity=0.969 Sum_probs=485.5
Q ss_pred CcceeeeeeeecccCccCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccC
Q 007399 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRR 82 (605)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 82 (605)
+++|+||+||.|+++.....+|+||..||.+|++++.|+.++|.+||+++|++...+.+.|.+||++|+.... ...++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~--~~~~~ 79 (567)
T PLN02228 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNV--FHHHG 79 (567)
T ss_pred CccceEEEEeCCcCCcCCCCCcHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchh--hcccC
Confidence 6899999999999999999999999999999998788999999999999999988889999999999985321 11235
Q ss_pred CCCHHHHHHHHccCCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCC
Q 007399 83 GLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162 (605)
Q Consensus 83 ~l~~~gF~~~L~s~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~ 162 (605)
.|+++||++||+|+.|.++.++..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++
T Consensus 80 ~~~~~gF~~yl~s~~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~ 159 (567)
T PLN02228 80 LVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPS 159 (567)
T ss_pred ccCHHHHHHHhcCcccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCC
Confidence 69999999999999898886666899999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChh
Q 007399 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242 (605)
Q Consensus 163 ~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~ 242 (605)
+++||||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++.+....||||+
T Consensus 160 ~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~lpsP~ 239 (567)
T PLN02228 160 GNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSPE 239 (567)
T ss_pred CCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCCCChH
Confidence 88899999999999999999999999999999999999999999999999999999999999999998766678899999
Q ss_pred hccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 007399 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322 (605)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (605)
+||||||||+|+++...+.+... +. ...+.++..+.. . . +.. +...+ ..+.....
T Consensus 240 ~Lk~kilik~Kk~~~~~~~~~~~----~~--~~~~~~~~~~~~-~----------~-----~~~--~~~~~-~~~~~~~~ 294 (567)
T PLN02228 240 ELKNKILISTKPPKEYLESKTVQ----TT--RTPTVKETSWKR-V----------A-----DAE--NKILE-EYKDEESE 294 (567)
T ss_pred HHCCCEEEEecCCcccccccccc----cc--cccccccccccc-c----------c-----cch--hhccc-cccccchh
Confidence 99999999999976543321100 00 000000000000 0 0 000 00000 00111235
Q ss_pred chhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccc
Q 007399 323 APEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGW 402 (605)
Q Consensus 323 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W 402 (605)
+++|++|++++..+.++++.......|...+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||
T Consensus 295 ~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSNy~P~~~W 374 (567)
T PLN02228 295 AVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGW 374 (567)
T ss_pred hhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCCCCchhHh
Confidence 68899999999887776666554445666679999999999999999999999999999999999999999999999999
Q ss_pred cccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCCcceEEEEE
Q 007399 403 SHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTV 482 (605)
Q Consensus 403 ~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~V 482 (605)
++|||||||||| |+|++||||+|||++||+|||||||++||+.. ..|||....|.+.+|+|+|
T Consensus 375 ~~G~QmVALN~Q--------------T~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~---~~f~p~~~~p~~~~L~I~V 437 (567)
T PLN02228 375 THGAQMVAFNMQ--------------GHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVKI 437 (567)
T ss_pred cCccEEeeeccc--------------CCChHHHhhcCchhhCCCCCceeCchhhcccc---cccCCccCCCcCceEEEEE
Confidence 999999999999 99999999999999999999999999999753 4799988888778899999
Q ss_pred EeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCee-ccEEEEeeecCCccEEEEEEEeccCCC
Q 007399 483 YMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEYDMSE 561 (605)
Q Consensus 483 isaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvW-NEtf~F~v~~pela~Lrf~V~D~D~~~ 561 (605)
|+|++|+.++...+.+..+++||||+|++.|.|.|..++||+++.||+||+| ||+|+|.+..||+|+|||.|+|+|..+
T Consensus 438 iSGq~l~lp~~~~~~~~~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~lRf~V~D~d~~~ 517 (567)
T PLN02228 438 YTGEGWDLDFHLTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYDNDT 517 (567)
T ss_pred EECCccCCCCCCCCCCCCCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEEEEEEEeCCCCC
Confidence 9999986544444455667899999999999999999999999988999999 999999999999999999999999877
Q ss_pred CCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 562 KDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 562 ~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
.++|+||+++||++|++|||||||+|..|+++.+|+|||||+|.
T Consensus 518 ~d~figq~~lPv~~Lr~GYR~VpL~~~~G~~l~~atLfv~~~~~ 561 (567)
T PLN02228 518 QNDFAGQTCLPLPELKSGVRAVRLHDRAGKAYKNTRLLVSFALD 561 (567)
T ss_pred CCCEEEEEEcchhHhhCCeeEEEccCCCCCCCCCeEEEEEEEEc
Confidence 89999999999999999999999999999999999999999973
|
|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-160 Score=1316.49 Aligned_cols=558 Identities=48% Similarity=0.750 Sum_probs=487.9
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhh
Q 007399 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIF 79 (605)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~ 79 (605)
+.+|+||+|+|++++|.- .++.||||..+|.+|+.+ +.|+.++|.+||+++|++..++.+.|++||++|+..++ ..
T Consensus 182 ~~~~~~k~~~~~~~~~~~-~~~~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~--~~ 258 (746)
T KOG0169|consen 182 DNSQTGKLEEEEFVKFRK-ELTKRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKE--FR 258 (746)
T ss_pred HhhccceehHHHHHHHHH-hhccCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhh--cc
Confidence 468999999999999955 467777999999999987 99999999999999999999999999999999996654 12
Q ss_pred ccCCCCHHHHHHHHccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEee
Q 007399 80 QRRGLNLEAFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (605)
Q Consensus 80 ~~~~l~~~gF~~~L~s~~n~~~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~W 158 (605)
....|+++||++||+|+.+.+++| +..|||||++|||||||+||||||||||||.|+||+|+||+||++||||||||||
T Consensus 259 ~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~W 338 (746)
T KOG0169|consen 259 RHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCW 338 (746)
T ss_pred ccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecc
Confidence 235699999999999999999988 6899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCC
Q 007399 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKE 237 (605)
Q Consensus 159 dG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~ 237 (605)
||++ ++|+|||||||||+|.|++||+|||+|||++|+|||||||||||+++||++||++|++||||+||.++.+ ..+.
T Consensus 339 dg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~~ 417 (746)
T KOG0169|consen 339 DGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLKE 417 (746)
T ss_pred cCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcccc
Confidence 9987 6899999999999999999999999999999999999999999999999999999999999999998765 5899
Q ss_pred CCChhhccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccc
Q 007399 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDK 317 (605)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (605)
||||++||||||||+||+++.+..... +..+.....++++.+...+. +++......+
T Consensus 418 lPSPe~LK~KILik~Kk~~~~~~~~~~---------------------~~~~~~~~d~~~~~e~s~e~--~~~~~~~~~~ 474 (746)
T KOG0169|consen 418 LPSPEELKNKILIKGKKLKELLEADSK---------------------EPSSFEVTDEDEDKESSTEN--DKSETDGQKK 474 (746)
T ss_pred CcCHHHHhcCEEEecCCCCcccccccc---------------------cccccccccccccccccccc--cccccccccc
Confidence 999999999999999999876543110 00000000000000000000 0000111122
Q ss_pred cccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCC
Q 007399 318 SQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 397 (605)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~ 397 (605)
.....+++|++||+|+.+++++++...++.+ .+++++||||+++.++++..+.+|++||+++|+||||+|+|+||||||
T Consensus 475 ~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~dSSNyn 553 (746)
T KOG0169|consen 475 SRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVDSSNYN 553 (746)
T ss_pred hhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccCCCCCC
Confidence 2236899999999999999999998888764 678899999999999999999999999999999999999999999999
Q ss_pred ccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCC-CCCcc
Q 007399 398 PLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK-LPAKK 476 (605)
Q Consensus 398 P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~-~p~~~ 476 (605)
|+.||++|||||||||| |+|++||||+|||++||||||||||.+||+. +..|+|... .|++.
T Consensus 554 Pq~~W~~G~QmVAlN~Q--------------t~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~---~~~F~P~~~~~~~~~ 616 (746)
T KOG0169|consen 554 PQEFWNHGCQMVALNFQ--------------TPGRMLDLNQGMFRANGGCGYVLKPDFLLDS---GSTFDPKSNLPPVKK 616 (746)
T ss_pred hHHHHhcCceEEEEecC--------------CCChhhhhhhhhhccCCCccceECcHHHcCC---CCccCCCCCCCCCCc
Confidence 99999999999999999 9999999999999999999999999999984 348999766 44555
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCC-CCCeeccEEEEeeecCCccEEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn-~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+|+|+|++|++|+.++.++.. ...+||||.|+|.|+|.|+.+++|+++.+| +||.|+|+|+|++..||||+|||.|+
T Consensus 617 tL~IkI~sGq~~~~~~~~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELAliRF~V~ 694 (746)
T KOG0169|consen 617 TLKIKIISGQGWLPDFGKTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELALIRFEVH 694 (746)
T ss_pred eeEEEEEecCcccCCCCCCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEeccceeEEEEEEE
Confidence 899999999999765444322 356899999999999999999999977765 99999999999999999999999999
Q ss_pred eccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|+|..++|||+||+|+|+++|++|||||||+|..|+.+..|+|||||+|.
T Consensus 695 d~d~~~~ddF~GQ~tlP~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~ 744 (746)
T KOG0169|consen 695 DYDYIGKDDFIGQTTLPVSELRQGYRHVPLLSREGEALSSASLFVRIAIV 744 (746)
T ss_pred ecCCCCcccccceeeccHHHhhCceeeeeecCCCCccccceeEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999973
|
|
| >PLN02952 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-158 Score=1305.25 Aligned_cols=580 Identities=63% Similarity=1.090 Sum_probs=493.9
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhh-chhh
Q 007399 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELK-HLNI 78 (605)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~-~~~~ 78 (605)
|...+|++|.||.|+++...++.|+||..||.+|+++ +.||.++|.+||+++|+|..++.++|.+||++|.... +...
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~ 93 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTR 93 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccccc
Confidence 3455899999999999999999999999999999977 8999999999999999998889999999999886332 1223
Q ss_pred hccCCCCHHHHHHHHcc-CCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEe
Q 007399 79 FQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI 157 (605)
Q Consensus 79 ~~~~~l~~~gF~~~L~s-~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~ 157 (605)
+.+..|+++||++||+| +.|.+.. ..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||||||
T Consensus 94 ~~~~~l~~~~F~~~l~s~~~~~p~~--~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~ 171 (599)
T PLN02952 94 YTRHGLNLDDFFHFLLYDDLNGPIT--PQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDL 171 (599)
T ss_pred ccccCcCHHHHHHHHcCcccccccc--ccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEe
Confidence 44567999999999999 5666665 47999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCC
Q 007399 158 WPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKE 237 (605)
Q Consensus 158 WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~ 237 (605)
|||+++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.|+.+....
T Consensus 172 wdg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~ 251 (599)
T PLN02952 172 WPGSTKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQ 251 (599)
T ss_pred ecCCCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999987666779
Q ss_pred CCChhhccCcEEEecCCCCchhhhhhhhhhccc---ccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcc
Q 007399 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKEND---SQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDS 314 (605)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (605)
||||++||||||||+|+++..++.+.......+ ...+...+++. .+...+..... . .+.+.. .+....
T Consensus 252 lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~-~~~~~~--~~~~~~ 322 (599)
T PLN02952 252 FPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESMLF---E-QEADSR--SDSDQD 322 (599)
T ss_pred CCChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---ccccccccccc---c-cccccc--ccccch
Confidence 999999999999999998766554321000000 00000000000 00000000000 0 000000 000000
Q ss_pred ccccccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCC
Q 007399 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (605)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SS 394 (605)
+.+......+++++|+.|+.+++++.+.+.++..+.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||
T Consensus 323 ~~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dSs 402 (599)
T PLN02952 323 DNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSS 402 (599)
T ss_pred hhhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcCC
Confidence 11223345789999999999998887777666556677889999999999999999999999999999999999999999
Q ss_pred CCCccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCC
Q 007399 395 NYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA 474 (605)
Q Consensus 395 N~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~ 474 (605)
||||+.||++|||||||||| |+|++||||+|||+.||+|||||||++||+.++.++.|||....|+
T Consensus 403 Ny~P~~~W~~G~QmVAlN~Q--------------t~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~ 468 (599)
T PLN02952 403 NYKPLIGWMHGAQMIAFNMQ--------------GYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPV 468 (599)
T ss_pred CCCchhHhcCccEEeeeccc--------------CCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCc
Confidence 99999999999999999999 9999999999999999999999999999987555568999988888
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+++|+|+||+|++|+++......+.++++||||+|++.|.|.|..+++|+++.||+||+|||+|.|.+..||+|+|+|.|
T Consensus 469 ~~~L~V~VisGq~l~lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELAllrf~V 548 (599)
T PLN02952 469 KKTLKVKVYLGDGWRLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLRIEV 548 (599)
T ss_pred cceEEEEEEECcccCCCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCccEEEEEE
Confidence 88999999999999865444456777889999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
+|+|..+.++|+||+++||++|++|||||||+|..|++++.++|||||+|.
T Consensus 549 ~D~D~~~~ddfiGq~~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 549 REYDMSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred EecCCCCCCCeEEEEEcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 999988889999999999999999999999999999999999999999984
|
|
| >PLN02223 phosphoinositide phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-151 Score=1224.16 Aligned_cols=523 Identities=42% Similarity=0.768 Sum_probs=449.5
Q ss_pred eeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHH---HHHcCCCCCCHHHHHHHHHHHhhhhc-hhhh-ccCC
Q 007399 10 FCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFL---IEVQKEDKASKEDAQAIIDSLRELKH-LNIF-QRRG 83 (605)
Q Consensus 10 ~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl---~~~Q~~~~~~~~~~~~ii~~~~~~~~-~~~~-~~~~ 83 (605)
|.|.|+|+.....++++|..+|.+|+++ ..|+.++|.+|| .++|+|..++.++|+.|++++...++ ...+ ..+.
T Consensus 1 ~~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~ 80 (537)
T PLN02223 1 MLLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRC 80 (537)
T ss_pred CccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccc
Confidence 5689999999999999999999999876 999999999999 99999999999999999999875432 3333 3367
Q ss_pred CCHHHHHHHHcc-CCCCCCCCCCCc-ccCCCCcccceeeeccCcccccCCCCCCC-CChHHHHHHHhCCccEEEEEeecC
Q 007399 84 LNLEAFFKYLFG-DINPPLSPTPVV-HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-CSDVPIIRALQKGVRVIELDIWPN 160 (605)
Q Consensus 84 l~~~gF~~~L~s-~~n~~~~~~~~v-~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~-SS~e~Y~~aL~~GCRcvElD~WdG 160 (605)
|+++||++||+| +.|.+.. ..| +|||++|||||||||||||||+||||.|. ||+|+|++||++||||||||||||
T Consensus 81 l~~~~f~~~L~s~~~n~~~~--~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~ 158 (537)
T PLN02223 81 LELDHLNEFLFSTELNPPIG--DQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPD 158 (537)
T ss_pred cCHHHHHHHhcCcccCCccc--cccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCC
Confidence 999999999999 5566554 356 99999999999999999999999999999 999999999999999999999987
Q ss_pred CCCCCceEeeCCcccccchHHHHHHHHhhhhhccC-CCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCC
Q 007399 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVAS-EYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEF 238 (605)
Q Consensus 161 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S-~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~l 238 (605)
++ ++|+|+||||||++|+|+|||+|||+|||++| +||||||||||||++||.+||++|++||||+||+++. +....|
T Consensus 159 ~~-~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~l 237 (537)
T PLN02223 159 GK-DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEF 237 (537)
T ss_pred CC-CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccC
Confidence 54 57899999999999999999999999999998 9999999999999999999999999999999999765 557899
Q ss_pred CChhhccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccc
Q 007399 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKS 318 (605)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (605)
|||++||||||||+|++++.+++.. ++ +. . . .. ++ .+..
T Consensus 238 PSP~~Lk~kIlik~K~~~~~~~~~~---------------~~---~~-~-~-------~~--~~------~~~~------ 276 (537)
T PLN02223 238 PSPAELQNKILISRRPPKELLYAKA---------------DD---GG-V-G-------VR--NE------LEIQ------ 276 (537)
T ss_pred CChHHhCCCEEEEcCCCcccccccc---------------cc---cc-c-c-------cc--cc------cccc------
Confidence 9999999999999999875543210 00 00 0 0 00 00 0000
Q ss_pred ccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHh--hcchhHHHhhccceeEEecCCcc-CCCCC
Q 007399 319 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVG--TYGNDIVRFTQRNLLRIYPKGIR-VDSSN 395 (605)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~--~~~~~~~~~~~~~l~RvYP~g~R-i~SSN 395 (605)
.....++|.+++.++..++++.+. +++|.++.++.+ .++.++++||++||+||||+|+| +||||
T Consensus 277 ~~~~~~~y~~li~~~~~~~~~~~~-------------~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSN 343 (537)
T PLN02223 277 EGPADKNYQSLVGFHAVEPRGMLQ-------------KALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAP 343 (537)
T ss_pred ccccccceeeeeeeeccccccchh-------------hhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCC
Confidence 012346788999988877654332 334444444433 24678999999999999999999 59999
Q ss_pred CCccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCCc
Q 007399 396 YNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAK 475 (605)
Q Consensus 396 ~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~ 475 (605)
|||+.+|++|||||||||| |+|++||||+|||++||+|||||||++||+.++.+ .|||....+.+
T Consensus 344 YnP~~~W~~GcQmVALN~Q--------------T~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~-~FdP~~~~~~~ 408 (537)
T PLN02223 344 YKPQRAWMHGAQLIALSRK--------------DDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTENPVVV 408 (537)
T ss_pred CCChhhcccceeEeeeccC--------------CCChhHHhhcchhccCCCCCceECChhhccCCccc-ccCCCCCcccc
Confidence 9999999999999999999 99999999999999999999999999999875543 79998765567
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
.+|+|+||+|++|+.+++++. +..+++||||+|+|.|.|.|+.+++|++..|++||+|||+|+|.+.+||+|+|+|.|+
T Consensus 409 ~~L~V~Visgq~~~~~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PELAlLrf~V~ 487 (537)
T PLN02223 409 KILKVKIYMGDGWIVDFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVY 487 (537)
T ss_pred eEEEEEEEEcccccCCccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCceEEEEEEE
Confidence 889999999999975444332 4467899999999999999999999987666799999999999999999999999999
Q ss_pred eccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|+|..+.++|+||+++||.+|++|||||||+|.+|+++..++|||||+|.
T Consensus 488 D~D~~~~ddfiGQ~~LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~~ 537 (537)
T PLN02223 488 DYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKWS 537 (537)
T ss_pred ecCCCCCCcEEEEEecchHHhcCCceeEeccCCCcCCCCCceEEEEEEeC
Confidence 99988889999999999999999999999999999999999999999984
|
|
| >KOG1265 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-140 Score=1152.57 Aligned_cols=553 Identities=31% Similarity=0.463 Sum_probs=444.4
Q ss_pred ccCCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhhhhchhhhccCCCCHH
Q 007399 18 VAASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLE 87 (605)
Q Consensus 18 ~~~~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~ 87 (605)
+..+|.|+||+.||.+++++ .+||+++|.+||++.|++.. ++..++..||++|++... ...+++|+.+
T Consensus 214 l~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~--~a~~gqms~d 291 (1189)
T KOG1265|consen 214 LNKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSD--NAEKGQMSTD 291 (1189)
T ss_pred HHhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchh--hhhccccchh
Confidence 35689999999999999976 89999999999999999975 356889999999996432 2346789999
Q ss_pred HHHHHHccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCC-CCC
Q 007399 88 AFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDN 165 (605)
Q Consensus 88 gF~~~L~s~~n~~~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~-~~~ 165 (605)
||.+||+++.|+++.+ +...++||+||||||||||||||||||+||.|.||+|+|++||+.||||||||||||.+ .+|
T Consensus 292 gf~ryl~gdEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~E 371 (1189)
T KOG1265|consen 292 GFVRYLMGDENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEE 371 (1189)
T ss_pred hhHHHhhCCccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCC
Confidence 9999999999999876 45789999999999999999999999999999999999999999999999999999953 357
Q ss_pred ceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCC
Q 007399 166 VDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPS 240 (605)
Q Consensus 166 piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-----~~~~lPS 240 (605)
|||+||.|||+.|.|+|||+||++.||+||+||||||+|||||+.||.+||+|+++||||+|++.|.+ +...|||
T Consensus 372 PvITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPs 451 (1189)
T KOG1265|consen 372 PVITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPS 451 (1189)
T ss_pred ceeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999996533 3468999
Q ss_pred hhhccCcEEEecCCCCchhhhh-h-hhhhccc-----ccCCCCCCccc---cc-----CCC----CCCccccCCCCCC--
Q 007399 241 PESLKRRIIISTKPPKEYLEAK-E-EKEKEND-----SQRGKGSADEE---AW-----GKE----VPNLKSLNNSACD-- 299 (605)
Q Consensus 241 P~~Lk~KIlik~K~~~~~~~~~-~-~~~~~~~-----~~~~~~~~~~~---~~-----~~~----~~~~~~~~~~~~~-- 299 (605)
|++||+|||||+||..-..... . ...+..+ +.......++. .. |.+ -+.+.....+.+.
T Consensus 452 P~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~ 531 (1189)
T KOG1265|consen 452 PEDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAH 531 (1189)
T ss_pred HHHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccc
Confidence 9999999999999753211000 0 0000000 00000000000 00 000 0001000001000
Q ss_pred -C----CCCCCCCCCCC----CccccccccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcc
Q 007399 300 -K----DDFDGGVDNDE----EDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYG 370 (605)
Q Consensus 300 -~----~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~ 370 (605)
+ ++.+...++.. .+........+++++|.||.|.....+.+|.-+-+ ...++.|+||+|+++..++++++
T Consensus 532 ~E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~k-rN~~f~msSf~E~~~~~~Lk~~~ 610 (1189)
T KOG1265|consen 532 PELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEK-RNRHFEMSSFDESTGLGYLKKSP 610 (1189)
T ss_pred hhhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhh-hcceeeeeechhHHHHHHHHhCc
Confidence 0 00000000000 00000112246788999998876655555544433 24578899999999999999999
Q ss_pred hhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeee
Q 007399 371 NDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYV 450 (605)
Q Consensus 371 ~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYV 450 (605)
.+||.||+++|+||||+|+|||||||+|+.|||+|||||||||| |+|.+||||.|||..||+|||+
T Consensus 611 iefV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQ--------------T~dlaMQlN~g~FEyNG~sGYl 676 (1189)
T KOG1265|consen 611 IEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQ--------------TPDLAMQLNMGMFEYNGGSGYL 676 (1189)
T ss_pred hHHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeecc--------------CccHHHHhhhhheeecCCccce
Confidence 99999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred ecCCcccCCCCCCCccCCCCCCCC----cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcce--eecc
Q 007399 451 KKPNFLLQTGPHNEVFDPKVKLPA----KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM--KKTK 524 (605)
Q Consensus 451 LKP~~lr~~~~~~~~f~p~~~~p~----~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k--~kTk 524 (605)
|||+|||++. +.|||....++ ..++.|+|||||-|.. ..+..||+|.+.|+|.|..+ +||+
T Consensus 677 lKPdfmRrpD---r~fdPFse~~VdgvIA~t~sV~VISgqFLSd----------rkvgtyVEVdmfgLP~Dt~Rk~~rtr 743 (1189)
T KOG1265|consen 677 LKPDFMRRPD---RQFDPFSESPVDGVIAATLSVTVISGQFLSD----------RKVGTYVEVDMFGLPTDTIRKEFRTR 743 (1189)
T ss_pred eChHHhhCCC---cCcCCcccCcccceEEeeEEEEEEeeeeccc----------cccCceEEEEecCCCchhhhhhhhhc
Confidence 9999999974 58999887554 5679999999997731 12346999999999999764 5899
Q ss_pred ccCCC-CCCeecc-EEEEe-eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEE
Q 007399 525 TLEDN-WIPSWNE-EFEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMH 601 (605)
Q Consensus 525 vv~nn-~NPvWNE-tf~F~-v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~ 601 (605)
++.+| +||+|+| .|.|. |..|++|+|||.||++. +.||||..+||+.|++|||||.|++..++++..++|||.
T Consensus 744 t~~~n~~npvy~eepfvF~KVvLpeLA~lRiavyeEg----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~ 819 (1189)
T KOG1265|consen 744 TVQGNSFNPVYEEEPFVFRKVVLPELASLRIAVYEEG----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVY 819 (1189)
T ss_pred cccCCCCCcccccCCcccceecccchhheeeeeeccC----CceeeeeccchhcccCcceeEEecCCCCCccccceeEEE
Confidence 98876 9999985 59996 88999999999999975 679999999999999999999999999999999999999
Q ss_pred EEE
Q 007399 602 FEF 604 (605)
Q Consensus 602 i~f 604 (605)
|++
T Consensus 820 i~~ 822 (1189)
T KOG1265|consen 820 IVL 822 (1189)
T ss_pred EEe
Confidence 975
|
|
| >KOG1264 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-130 Score=1064.14 Aligned_cols=536 Identities=32% Similarity=0.503 Sum_probs=420.9
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCCCCCCCCC-CCcccC-CCCc
Q 007399 38 GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHD-MTAP 114 (605)
Q Consensus 38 ~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~~~~-~~v~qD-M~~P 114 (605)
..++..+|++||..+|+|.++++ ..+++++.+|.+. .....+++.|++++|..||+|..|+.|+++ ..|.+| |+.|
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D-~~re~~EPyl~v~EFv~fLFSreNslWd~k~d~V~~d~Mn~P 314 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD-TMRETAEPYLFVDEFVTFLFSRENSLWDSKYDAVDMDDMNNP 314 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh-hhhhccCcceeHHHHHHHHhhcccccccccccccchhhhcCc
Confidence 57899999999999999987654 3455666666632 223345678999999999999999999985 467665 9999
Q ss_pred ccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhhhcc
Q 007399 115 VSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA 194 (605)
Q Consensus 115 Ls~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~ 194 (605)
||||||+||||||||||||.++||.|+|+|||++||||||||||||+|| .|+||||||+||||.|.|||++||+|||++
T Consensus 315 LShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd~-~pvIyHG~T~TtKIkf~DVlhtIkdhAFvt 393 (1267)
T KOG1264|consen 315 LSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPDG-KPVIYHGHTRTTKIKFDDVLHTIKDHAFVT 393 (1267)
T ss_pred chhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCCC-CceEEeccceeeeeehHHHHHHHHhhceec
Confidence 9999999999999999999999999999999999999999999999985 799999999999999999999999999999
Q ss_pred CCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhh-hhhhccc--
Q 007399 195 SEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKE-EKEKEND-- 270 (605)
Q Consensus 195 S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~-~~~~~~~-- 270 (605)
|+||||||||.|||.+||+.||+.+++||||+|++.|.+ ....||||.|||+|||||+||.+...+-.. ..+.+++
T Consensus 394 SeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~edd~~ 473 (1267)
T KOG1264|consen 394 SEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDKEDDHK 473 (1267)
T ss_pred cCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhcccccch
Confidence 999999999999999999999999999999999998765 478999999999999999999764211110 0000000
Q ss_pred ------------------------------------ccCCCCCCc---------cc-----cc-----------------
Q 007399 271 ------------------------------------SQRGKGSAD---------EE-----AW----------------- 283 (605)
Q Consensus 271 ------------------------------------~~~~~~~~~---------~~-----~~----------------- 283 (605)
.+......+ ++ .|
T Consensus 474 nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee~~kd~s~s~ElH~~E~WFHgkle~R~eAekll~e 553 (1267)
T KOG1264|consen 474 NSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEEVPKDISPSTELHFGEKWFHGKLEGRTEAEKLLQE 553 (1267)
T ss_pred hhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCcccccccCCcchhhccchhhhhcccccchHHHHHHHH
Confidence 000000001 10 01
Q ss_pred -----CCC------------CCC--c------------------------------------------------------
Q 007399 284 -----GKE------------VPN--L------------------------------------------------------ 290 (605)
Q Consensus 284 -----~~~------------~~~--~------------------------------------------------------ 290 (605)
|.. +.+ +
T Consensus 554 ycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~aeF~m 633 (1267)
T KOG1264|consen 554 YCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCAEFEM 633 (1267)
T ss_pred HHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccccceEE
Confidence 000 000 0
Q ss_pred --cccC----CCCCC----------------------------C------------------------------------
Q 007399 291 --KSLN----NSACD----------------------------K------------------------------------ 300 (605)
Q Consensus 291 --~~~~----~~~~~----------------------------~------------------------------------ 300 (605)
+... ..+++ +
T Consensus 634 ~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~~F 713 (1267)
T KOG1264|consen 634 RLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLGTSAF 713 (1267)
T ss_pred EecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEeccHHH
Confidence 0000 00000 0
Q ss_pred -------------------------------------------CCC----CCCCCCC------------------C----
Q 007399 301 -------------------------------------------DDF----DGGVDND------------------E---- 311 (605)
Q Consensus 301 -------------------------------------------~~~----~~~~~~~------------------~---- 311 (605)
+++ ++.+.+. +
T Consensus 714 esLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DELSF 793 (1267)
T KOG1264|consen 714 ESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDELSF 793 (1267)
T ss_pred HHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcccccc
Confidence 000 0000000 0
Q ss_pred -----------Ccc-------------------------------------------------------------cc--c
Q 007399 312 -----------EDS-------------------------------------------------------------DD--K 317 (605)
Q Consensus 312 -----------~~~-------------------------------------------------------------~~--~ 317 (605)
+++ .+ +
T Consensus 794 pk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q~~n~~ 873 (1267)
T KOG1264|consen 794 PKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQGKNQK 873 (1267)
T ss_pred cccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeecccccCCc
Confidence 000 00 0
Q ss_pred ---------------------------------------------------cccccchhhhcceeeecccccCCcccccc
Q 007399 318 ---------------------------------------------------SQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 318 ---------------------------------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
...+++.|+|+||+|+...|+.. .+ +
T Consensus 874 ~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~-~~-~- 950 (1267)
T KOG1264|consen 874 SFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTK-DN-L- 950 (1267)
T ss_pred ceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCcc-cc-c-
Confidence 00123556777777776666321 00 0
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.++....|+||.|+|+.|++...+..|+.||+++|+||||+|.|+|||||||+++|++||||||||||
T Consensus 951 ~n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~Q------------ 1018 (1267)
T KOG1264|consen 951 ENPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQ------------ 1018 (1267)
T ss_pred ccHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeecc------------
Confidence 12334468999999999999988899999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCC----CCcceEEEEEEeccccccCCCCCccCCCCC
Q 007399 427 GDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSP 502 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~----p~~~~L~V~Visaq~L~~~~~~~~~d~~s~ 502 (605)
|.|++||+|+|+|+.||+|||||||++||.. .|||..+. -.+.+|.|+||.|+.|+. . ..+.
T Consensus 1019 --TgDKpMQmNqa~F~~ngrcGYvLqPs~Mrte-----~fdP~n~e~~~~l~p~~lsv~vigaRHL~k----~---gr~i 1084 (1267)
T KOG1264|consen 1019 --TGDKPMQMNQALFSLNGRCGYVLQPSSMRTE-----KFDPMNPESQRGLLPMTLSVKVLGARHLPK----L---GRSI 1084 (1267)
T ss_pred --CCCchhhhhHHHhhcCCceeeEecchhcccc-----cCCCCChHHhccccceEEEEEEeecccccc----C---CCCc
Confidence 8889999999999999999999999999975 68887641 123569999999998862 1 1245
Q ss_pred CCceEEEEEecCCCCcceeeccccC-CCCCCeec-cEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007399 503 PDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWN-EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 503 ~DPyV~V~i~G~p~D~~k~kTkvv~-nn~NPvWN-Etf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
.-|||+|+|.|.+.|..+++|++|. |++||+|| |+|+|.|.+|++|+|||.|+|+|+++...||||+++||.+++.||
T Consensus 1085 ~cPfVevEiiGa~~Dt~~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~FiaqA~yPv~~ik~Gf 1164 (1267)
T KOG1264|consen 1085 ACPFVEVEIIGAEYDTNKFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFLAQATYPVKAIKSGF 1164 (1267)
T ss_pred cCCcEEEEEeccccCCCceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCcceeeeeecchhhhhccc
Confidence 5689999999999999988877665 55999999 999999999999999999999999998899999999999999999
Q ss_pred EEEEccCCCCCcccCeEEEEEEEE
Q 007399 581 RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 581 R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.|||+|...+.++.|+|||.|++
T Consensus 1165 RsVpLkN~ySEdlELaSLLv~i~m 1188 (1267)
T KOG1264|consen 1165 RSVPLKNGYSEDLELASLLVFIEM 1188 (1267)
T ss_pred eeeecccCchhhhhhhhheeeeEe
Confidence 999999999999999999999986
|
|
| >cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-108 Score=823.24 Aligned_cols=257 Identities=36% Similarity=0.562 Sum_probs=238.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999774 446799999999999999999852
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
+.+++++|+.+..++.++++.....
T Consensus 150 -------------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~~~~ 174 (258)
T cd08629 150 -------------------------------------------------------LVPELSDMIIYCKSVHFGGFSSPGT 174 (258)
T ss_pred -------------------------------------------------------ccHHHHHHHHHhcCCCCCCccchhh
Confidence 1355777777777777777766554
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.++..++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 175 ~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Q------------ 242 (258)
T cd08629 175 SGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQ------------ 242 (258)
T ss_pred cCCCcceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEeccc------------
Confidence 34556789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 243 --t~d~~m~LN~G~F~~N 258 (258)
T cd08629 243 --TPGPEMDVYLGCFQDN 258 (258)
T ss_pred --CCChhHHhhhchhcCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain |
| >cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-107 Score=812.19 Aligned_cols=252 Identities=37% Similarity=0.564 Sum_probs=223.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||||||||||+|+||.|+||+|||++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|+....+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~Ls----- 154 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRALS----- 154 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchhhh-----
Confidence 999999999999999999999999999999999999999998653 3457899999999999999998542221
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
+|+.+..+..+.++....
T Consensus 155 --------------------------------------------------------------~l~~y~~~~~~~~~~~~~ 172 (254)
T cd08633 155 --------------------------------------------------------------DLVKYTKSVRVHDIETEA 172 (254)
T ss_pred --------------------------------------------------------------HHhhhcccCCcCcccccc
Confidence 111121111111121111
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 173 ---~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Q----------- 238 (254)
T cd08633 173 ---TSSWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQ----------- 238 (254)
T ss_pred ---ccceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEeccc-----------
Confidence 124578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 239 ---t~d~~m~lN~g~F~~N 254 (254)
T cd08633 239 ---SEGRMLQLNRAKFSAN 254 (254)
T ss_pred ---CCCchhHhhcccccCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m |
| >cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-107 Score=816.93 Aligned_cols=256 Identities=34% Similarity=0.594 Sum_probs=236.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999998852
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
++++|++|+.|+.++.++++....
T Consensus 151 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 174 (258)
T cd08630 151 --------------------------------------------------------ISPELSALAVYCQATRLRTLEPAP 174 (258)
T ss_pred --------------------------------------------------------chHHHHhhHhhcccccCCCcchhh
Confidence 246788888888777777776553
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
.. ....+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 175 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~Q----------- 242 (258)
T cd08630 175 VQ-PQPCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQ----------- 242 (258)
T ss_pred hc-CCCccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEeccc-----------
Confidence 11 224578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 243 ---T~d~~M~LN~G~F~~N 258 (258)
T cd08630 243 ---TPGYEMDLNAGRFLVN 258 (258)
T ss_pred ---CCChhhhhhcccccCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh |
| >cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-107 Score=813.90 Aligned_cols=255 Identities=35% Similarity=0.548 Sum_probs=228.3
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~ki--------- 150 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKKI--------- 150 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999998720
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
++++++|+.+..+..+.++....
T Consensus 151 ---------------------------------------------------------~~els~L~~y~~~~~~~~~~~~~ 173 (257)
T cd08595 151 ---------------------------------------------------------AKALSDLVIYTKSEKFCSFTHSR 173 (257)
T ss_pred ---------------------------------------------------------ChhHHHHhhhcCCcCCCCccccc
Confidence 12355555554443333333222
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 174 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Q----------- 241 (257)
T cd08595 174 DN-QHSYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQ----------- 241 (257)
T ss_pred cc-cccceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEeccc-----------
Confidence 11 123578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 242 ---t~d~~M~LN~G~F~~N 257 (257)
T cd08595 242 ---TLGAPMDLQNGKFLDN 257 (257)
T ss_pred ---CCChhhhhhcCcccCC
Confidence 9999999999999987
|
This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) |
| >cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-107 Score=813.64 Aligned_cols=254 Identities=33% Similarity=0.526 Sum_probs=225.5
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhh
Q 007399 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLE 260 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (605)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++.+. ...||||++||||||||+|+.++
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~e--- 157 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEE--- 157 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeeccccc---
Confidence 999999999999999999999 799999999999999999999977532 36899999999999999998421
Q ss_pred hhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCC
Q 007399 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (605)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (605)
+++|+.+..+..+.+
T Consensus 158 -----------------------------------------------------------------ls~lv~y~~~~kf~~ 172 (261)
T cd08624 158 -----------------------------------------------------------------MSSLVNYIQPTKFVS 172 (261)
T ss_pred -----------------------------------------------------------------chhhhcccCCcCCCC
Confidence 223333333333333
Q ss_pred cccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccc
Q 007399 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420 (605)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~ 420 (605)
+.......+ ..+++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 173 f~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Q------ 245 (261)
T cd08624 173 FEFSAQKNR-SYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQ------ 245 (261)
T ss_pred cccccccCC-cceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEeccc------
Confidence 333222222 3468999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccC
Q 007399 421 EVNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 421 ~~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 246 --------T~D~~M~LN~G~F~~n 261 (261)
T cd08624 246 --------TMDLPMQQNMALFEFN 261 (261)
T ss_pred --------CCChhhhhhcccccCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-107 Score=808.14 Aligned_cols=251 Identities=33% Similarity=0.557 Sum_probs=222.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||||||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|++...+
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~el------ 153 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRDL------ 153 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHHH------
Confidence 999999999999999999999999999999999999999987652 346789999999999999999853211
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
++|+.++.+..+.++.+.
T Consensus 154 -------------------------------------------------------------s~l~~~~~~~~~~~~~~~- 171 (253)
T cd08632 154 -------------------------------------------------------------SDLVVYTNSVAAQDIVDD- 171 (253)
T ss_pred -------------------------------------------------------------HhhhhhccCcccccchhc-
Confidence 111222111111111110
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 172 ---~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Q----------- 237 (253)
T cd08632 172 ---GSTGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQ----------- 237 (253)
T ss_pred ---CCcccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEeccc-----------
Confidence 112578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 238 ---t~d~~m~LN~g~F~~n 253 (253)
T cd08632 238 ---SEGRMMQLNRAKFMVN 253 (253)
T ss_pred ---CCChhHHhhcccccCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m |
| >cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-107 Score=812.96 Aligned_cols=256 Identities=34% Similarity=0.581 Sum_probs=231.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999999852
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
+.+++++|+.+..+..+.++...-
T Consensus 151 --------------------------------------------------------~~~eLs~L~~y~~~~~f~~~~~~~ 174 (258)
T cd08631 151 --------------------------------------------------------LSPELSDCVIYCKSVSFRSFTHSR 174 (258)
T ss_pred --------------------------------------------------------ccHHHHHhHhhhcccccCCccccc
Confidence 124566666665554444444221
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 175 ~~-~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Q----------- 242 (258)
T cd08631 175 EH-YHFYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQ----------- 242 (258)
T ss_pred cc-CccceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeeccc-----------
Confidence 11 123578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 243 ---t~d~~m~LN~G~F~~N 258 (258)
T cd08631 243 ---TAGLEMDLNDGLFRQN 258 (258)
T ss_pred ---CCChhHHhhcchhcCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which |
| >cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-106 Score=808.81 Aligned_cols=249 Identities=35% Similarity=0.551 Sum_probs=224.6
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
.|||++|||||||||||||||+||||.|+||+|||++||++||||||||||||++ ++||||||||||++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC---C--CCCCCCChhhccCcEEEecCCCCchhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS---E--CLKEFPSPESLKRRIIISTKPPKEYLEAK 262 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~---~--~~~~lPSP~~Lk~KIlik~K~~~~~~~~~ 262 (605)
|+|||++|+||||||||||||.+||.+||+||+++|||+|++++. + ....||||++||||||||+|+.+
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~~------ 153 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAP------ 153 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCcH------
Confidence 999999999999999999999999999999999999999998652 1 24689999999999999998842
Q ss_pred hhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcc
Q 007399 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLK 342 (605)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 342 (605)
++++|+.+..+..+.++.
T Consensus 154 --------------------------------------------------------------els~l~~y~~~~k~~~~~ 171 (254)
T cd08596 154 --------------------------------------------------------------ELSDLVIYCQAVKFPGLS 171 (254)
T ss_pred --------------------------------------------------------------HHHHHHHHhcCccCCCCC
Confidence 233444333232223333
Q ss_pred cccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccc
Q 007399 343 ECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEV 422 (605)
Q Consensus 343 ~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~ 422 (605)
.+...+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 172 -----~~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Q-------- 238 (254)
T cd08596 172 -----TPKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQ-------- 238 (254)
T ss_pred -----ccccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeeccc--------
Confidence 1335688999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcceeecccccccC
Q 007399 423 NFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 423 ~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 239 ------t~d~~m~LN~G~F~~N 254 (254)
T cd08596 239 ------TDDLPMHLNAAMFEAN 254 (254)
T ss_pred ------CCChHHHhhhchhcCC
Confidence 9999999999999987
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core |
| >cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-106 Score=807.14 Aligned_cols=251 Identities=34% Similarity=0.541 Sum_probs=220.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhhh
Q 007399 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (605)
|++|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..+.
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~L--- 157 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSSL--- 157 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhhh---
Confidence 999999999999999999999999999999999999999999976432 468999999999999999983110
Q ss_pred hhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCc
Q 007399 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (605)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (605)
+.+..+..+.++
T Consensus 158 --------------------------------------------------------------------~~y~~~~~~~~~ 169 (257)
T cd08626 158 --------------------------------------------------------------------VNYAQPVKFQGF 169 (257)
T ss_pred --------------------------------------------------------------------hcccccCCCCCc
Confidence 000000000111
Q ss_pred ccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccc
Q 007399 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIE 421 (605)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~ 421 (605)
....+.. ..++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 170 ~~~~~~~-~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Q------- 241 (257)
T cd08626 170 DVAEERN-IHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQ------- 241 (257)
T ss_pred CchhhcC-CCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEeccc-------
Confidence 1111111 13578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccC
Q 007399 422 VNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 422 ~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 242 -------t~d~~m~LN~G~F~~n 257 (257)
T cd08626 242 -------TPDLGMQLNQGKFEYN 257 (257)
T ss_pred -------CCChhHHhhhccccCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-106 Score=803.98 Aligned_cols=251 Identities=33% Similarity=0.524 Sum_probs=222.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~-~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +++||||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhh
Q 007399 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (605)
||+|||++|+||||||||||| +++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs---- 156 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMS---- 156 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchh----
Confidence 999999999999999999999 59999999999999999999997743 24689999999999999998731
Q ss_pred hhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCC
Q 007399 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (605)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (605)
+|+.|+.+..+.+
T Consensus 157 -------------------------------------------------------------------~Lv~y~~~v~f~~ 169 (258)
T cd08623 157 -------------------------------------------------------------------NLVNYIQPVKFES 169 (258)
T ss_pred -------------------------------------------------------------------cccccccCcccCC
Confidence 1122222222222
Q ss_pred cccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccc
Q 007399 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420 (605)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~ 420 (605)
+....+. ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++||||||||||
T Consensus 170 f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Q------ 242 (258)
T cd08623 170 FEASKKR-NKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQ------ 242 (258)
T ss_pred ccccccc-CCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecC------
Confidence 2221111 123578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccC
Q 007399 421 EVNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 421 ~~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 243 --------T~d~~M~LN~G~F~~~ 258 (258)
T cd08623 243 --------TVDLSMQINMGMYEYN 258 (258)
T ss_pred --------CCCcchhhhcccccCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-105 Score=803.04 Aligned_cols=251 Identities=36% Similarity=0.548 Sum_probs=221.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCC-CCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~-~~piv~HG~Tlts~i~f~dvi~a 186 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++ ++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhhh
Q 007399 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (605)
||+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..+.
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~L--- 157 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSSL--- 157 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchhh---
Confidence 999999999999999999999999999999999999999999977432 368999999999999999983211
Q ss_pred hhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCc
Q 007399 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (605)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (605)
++|..+..+.++
T Consensus 158 --------------------------------------------------------------------~~y~~~~~f~~~ 169 (257)
T cd08591 158 --------------------------------------------------------------------VNYIQPVKFQGF 169 (257)
T ss_pred --------------------------------------------------------------------hccccCCCCCCc
Confidence 000000000111
Q ss_pred ccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccc
Q 007399 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIE 421 (605)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~ 421 (605)
....+. ...++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 170 ~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Q------- 241 (257)
T cd08591 170 EVAEKR-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQ------- 241 (257)
T ss_pred cchhhc-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCc-------
Confidence 111111 123578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccC
Q 007399 422 VNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 422 ~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 242 -------t~d~~m~lN~g~F~~N 257 (257)
T cd08591 242 -------TPDLPMQLNQGKFEYN 257 (257)
T ss_pred -------CCChhHHhhcccccCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod |
| >cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-105 Score=806.10 Aligned_cols=256 Identities=38% Similarity=0.607 Sum_probs=232.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+||||||||||||++||.+||+||+++|||+|+.++.+ ....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 9999999999999999999999999999999999999999997743 35789999999999999999852
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
+.+++++|+.+..+..+.++.+...
T Consensus 150 -------------------------------------------------------i~~els~L~~~~~~~k~~~~~~~~~ 174 (257)
T cd08593 150 -------------------------------------------------------LAKELSDLVIYCKSVHFKSFEHSKE 174 (257)
T ss_pred -------------------------------------------------------ccHHHHhhhhhcccccCCChhhhcc
Confidence 1245666665554433445544332
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.....+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 175 -~~~~~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Q------------ 241 (257)
T cd08593 175 -NYHFYEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQ------------ 241 (257)
T ss_pred -cCCCceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeeccc------------
Confidence 2345689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 242 --t~D~~m~LN~G~F~~N 257 (257)
T cd08593 242 --TPGEEMDLNDGLFRQN 257 (257)
T ss_pred --CCChHHHhhhchhcCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is |
| >cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-105 Score=804.04 Aligned_cols=251 Identities=33% Similarity=0.514 Sum_probs=222.5
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~-~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
.|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ +++|+||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~ 80 (258)
T cd08625 1 SDDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEA 80 (258)
T ss_pred CCccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999952 468999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhh
Q 007399 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (605)
||+|||++|+||||||||||| +.+||++||++|++||||+|++++.+ ....||||++||||||||+|+..+
T Consensus 81 I~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklSd--- 157 (258)
T cd08625 81 IAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMST--- 157 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeeccc---
Confidence 999999999999999999999 69999999999999999999997754 246899999999999999988421
Q ss_pred hhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCC
Q 007399 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (605)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (605)
|+.|+.+..+.+
T Consensus 158 --------------------------------------------------------------------Lvvy~~~vkf~~ 169 (258)
T cd08625 158 --------------------------------------------------------------------LVNYIEPVKFKS 169 (258)
T ss_pred --------------------------------------------------------------------ccceecccccCC
Confidence 112222222222
Q ss_pred cccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccc
Q 007399 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420 (605)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~ 420 (605)
+.+.... ...++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++||||||||||
T Consensus 170 f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~Q------ 242 (258)
T cd08625 170 FEAAAKR-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQ------ 242 (258)
T ss_pred chhhhcc-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecC------
Confidence 3222111 124578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccC
Q 007399 421 EVNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 421 ~~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 243 --------T~D~~M~LN~G~F~~n 258 (258)
T cd08625 243 --------TLDLAMQLNMGVFEYN 258 (258)
T ss_pred --------CCCcchhhhcccccCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho |
| >cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-104 Score=781.71 Aligned_cols=225 Identities=41% Similarity=0.659 Sum_probs=214.9
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++||+||||||||||||+||||.|+||+|||++||++||||||||||||++ ++|+|||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33468999999999999999643
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 149 ------~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Q----------- 211 (227)
T cd08594 149 ------WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQ----------- 211 (227)
T ss_pred ------ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEeccc-----------
Confidence 256899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 212 ---t~d~~m~LN~g~F~~N 227 (227)
T cd08594 212 ---TEGRMLQLNRAKFRAN 227 (227)
T ss_pred ---CCChhhHhhcccccCC
Confidence 9999999999999987
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, |
| >cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-105 Score=796.11 Aligned_cols=253 Identities=36% Similarity=0.603 Sum_probs=227.5
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
.|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999986 479999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~~---------- 149 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKLI---------- 149 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCcC----------
Confidence 999999999999999999999999999999999999999998664 346799999999999999998741
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
++++++|+.|+.+..+. ... .
T Consensus 150 --------------------------------------------------------~~eLs~l~~y~~~~~~~-~~~-~- 170 (254)
T cd08628 150 --------------------------------------------------------AIELSDLVVYCKPTSKT-KDN-L- 170 (254)
T ss_pred --------------------------------------------------------CHHHHhhHhhhcccccc-cCC-c-
Confidence 24566666665443221 110 1
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.++...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++||||||||||
T Consensus 171 ~~~~~~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Q------------ 238 (254)
T cd08628 171 ENPDFKEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQ------------ 238 (254)
T ss_pred ccccccccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeecc------------
Confidence 12334578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 239 --T~d~~M~LN~G~F~~n 254 (254)
T cd08628 239 --TADKYMQLNHALFSLN 254 (254)
T ss_pred --CCChhhhhhhhhccCC
Confidence 9999999999999987
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw |
| >cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-103 Score=786.64 Aligned_cols=259 Identities=35% Similarity=0.566 Sum_probs=234.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||+||+++|||+||.++. +....||||++||||||||+|+++.
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~--------- 150 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR--------- 150 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------
Confidence 999999999999999999999999999999999999999999774 3567899999999999999998521
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
.++++++++|+.|..+..+.++.....
T Consensus 151 -----------------------------------------------------~~~~~els~l~~~~~~~~~~~~~~~~~ 177 (260)
T cd08597 151 -----------------------------------------------------RKLCKELSDLVSLCKSVRFQDFPTSAQ 177 (260)
T ss_pred -----------------------------------------------------ccccHHHHhhhhhhcCcccCCcccccc
Confidence 023467788877765544444443211
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.+...+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 178 -~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Q------------ 244 (260)
T cd08597 178 -NQKYWEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQ------------ 244 (260)
T ss_pred -ccCcccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeeccc------------
Confidence 2334678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 245 --t~d~~M~lN~g~F~~N 260 (260)
T cd08597 245 --TPGLMMDLNTGKFLEN 260 (260)
T ss_pred --CCChhhhhhcccccCC
Confidence 9999999999999987
|
This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment |
| >cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-102 Score=764.99 Aligned_cols=225 Identities=42% Similarity=0.697 Sum_probs=215.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||++|+++|||+||+++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999988654 48999999999999999643
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||++||++||||||||||
T Consensus 148 -----~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Q------------ 210 (226)
T cd08558 148 -----YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQ------------ 210 (226)
T ss_pred -----ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeeccc------------
Confidence 246899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 211 --t~d~~m~LN~g~F~~n 226 (226)
T cd08558 211 --TPDLPMQLNQGKFEQN 226 (226)
T ss_pred --CCChhhhhhcccccCC
Confidence 9999999999999976
|
This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki |
| >cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-101 Score=764.35 Aligned_cols=229 Identities=38% Similarity=0.648 Sum_probs=215.7
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
.|||++||+||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999985 589999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||+||+++|||+|+.++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998753 3578999999999999998770 0
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
+
T Consensus 150 ---------------------------------------------------------~---------------------- 150 (231)
T cd08598 150 ---------------------------------------------------------K---------------------- 150 (231)
T ss_pred ---------------------------------------------------------C----------------------
Confidence 0
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 151 ---~~~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Q------------ 215 (231)
T cd08598 151 ---TPNHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQ------------ 215 (231)
T ss_pred ---CCceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEeccc------------
Confidence 01257899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeccccccc
Q 007399 427 GDGHGRSLWLMHGMFRA 443 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~ 443 (605)
|+|++||||+|||+.
T Consensus 216 --t~d~~m~LN~G~F~~ 230 (231)
T cd08598 216 --TYDLGMQLNEAMFAG 230 (231)
T ss_pred --CCChhhhhhcccccC
Confidence 999999999999985
|
This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro |
| >cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-101 Score=757.40 Aligned_cols=225 Identities=38% Similarity=0.661 Sum_probs=210.7
Q ss_pred cCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007399 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (605)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (605)
+||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+|||
T Consensus 2 ~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I~ 80 (229)
T cd08627 2 EEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTIK 80 (229)
T ss_pred ccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999987 5799999999999999999999999
Q ss_pred hhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhhhhhh
Q 007399 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267 (605)
Q Consensus 189 ~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~ 267 (605)
+|||++|+||||||||||||++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..
T Consensus 81 ~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~----------- 149 (229)
T cd08627 81 EHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY----------- 149 (229)
T ss_pred HhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc-----------
Confidence 999999999999999999999999999999999999999997644 46789999999999999988730
Q ss_pred cccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccccc
Q 007399 268 ENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKV 347 (605)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 347 (605)
.
T Consensus 150 --------------------------------------------------------~----------------------- 150 (229)
T cd08627 150 --------------------------------------------------------R----------------------- 150 (229)
T ss_pred --------------------------------------------------------c-----------------------
Confidence 0
Q ss_pred CCCceeeeeccHHHHHHHHh-hcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 348 DPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 348 ~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.++||+|+++.++++ ..+.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 151 -----~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Q------------ 213 (229)
T cd08627 151 -----DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQ------------ 213 (229)
T ss_pred -----ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeecc------------
Confidence 125788999998875 35689999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeccccccc
Q 007399 427 GDGHGRSLWLMHGMFRA 443 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~ 443 (605)
|+|++||||+|||..
T Consensus 214 --t~d~~M~LN~G~F~~ 228 (229)
T cd08627 214 --TPDKPMQMNQALFML 228 (229)
T ss_pred --CCCcchhhhcCcccC
Confidence 999999999999974
|
This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw |
| >cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-100 Score=752.78 Aligned_cols=227 Identities=39% Similarity=0.675 Sum_probs=214.7
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||+||+++|||+||+++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999987644 4678999999999999998762
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeeccHHHHHHHH-hhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAV-GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~-~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 149 ----~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Q----------- 213 (229)
T cd08592 149 ----FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQ----------- 213 (229)
T ss_pred ----cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeecc-----------
Confidence 0235689999999998 478999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 214 ---t~d~~m~lN~g~F~~N 229 (229)
T cd08592 214 ---TPDKPMQLNQALFMLN 229 (229)
T ss_pred ---CCChhHHhhcccccCC
Confidence 9999999999999987
|
This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl |
| >cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-99 Score=748.25 Aligned_cols=226 Identities=62% Similarity=1.059 Sum_probs=215.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||++|+++|||+||.|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987554 479999999999999997641
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeeccHHHHHHHHh-hcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
.+++||+|+++.++.+ +++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 149 -----~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Q----------- 212 (228)
T cd08599 149 -----VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQ----------- 212 (228)
T ss_pred -----ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecC-----------
Confidence 2457999999999996 88999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 213 ---t~d~~m~LN~G~F~~N 228 (228)
T cd08599 213 ---GYDRPLWLNRGKFRAN 228 (228)
T ss_pred ---CCChhhhhhcccccCC
Confidence 9999999999999987
|
This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi |
| >cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-62 Score=503.97 Aligned_cols=251 Identities=22% Similarity=0.355 Sum_probs=211.6
Q ss_pred ccCCCCcccceeeeccCcccccCCCCC-----CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~-----g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 182 (605)
++||++||+||||++||||||.|+|+. |.|+.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 589999999999999999999999998 9999999999999999999999999976 579999999999 999999
Q ss_pred HHHHHhhhhhccCCCceEEEeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCcEEEecCCCCchhh
Q 007399 183 CLRSIKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLE 260 (605)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hc~~--~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (605)
||++|+++||..++||||||||+||+. +||++||++|+++||++|+.|+......+|||++||||||||+|+......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998766567899999999999999988532100
Q ss_pred hhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCC
Q 007399 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (605)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (605)
. + .+...|. .+
T Consensus 159 ~------------~---~~~~~~~------------------------------------------------------~~ 169 (274)
T cd00137 159 T------------G---SSNDTGF------------------------------------------------------VS 169 (274)
T ss_pred c------------c---cccccCc------------------------------------------------------CC
Confidence 0 0 0000000 00
Q ss_pred cccccccCCCceeeeeccHHHHHH----HHhhcchhHHHhhccceeEEecCCcc---------CCCCCCCccccccc---
Q 007399 341 LKECLKVDPDKVRRLSLSEQQLEN----AVGTYGNDIVRFTQRNLLRIYPKGIR---------VDSSNYNPLIGWSH--- 404 (605)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~----~~~~~~~~~~~~~~~~l~RvYP~g~R---------i~SSN~~P~~~W~~--- 404 (605)
+..... .....++.|++|.++.. +..+...+++.||+++|+|+||+|+| ++||||+|+.+|++
T Consensus 170 ~~~~~~-~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~ 248 (274)
T cd00137 170 FEFSTQ-KNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPA 248 (274)
T ss_pred cccccc-cCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccC
Confidence 000000 00123567888888754 33445667899999999999999999 99999999999999
Q ss_pred cceEeeecccccccccccccccCCCCCcceeecccccccC
Q 007399 405 GAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 405 G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|||||||||| |.|++|+||+|+|+.|
T Consensus 249 g~qiValdfq--------------t~~~~~~ln~~~f~~N 274 (274)
T cd00137 249 GCGIVILDFQ--------------TMDLPMQQYMAVIEFN 274 (274)
T ss_pred CceEEEeeCc--------------CCCccHHHHhhhhccC
Confidence 9999999999 9999999999999976
|
This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a |
| >smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-44 Score=320.87 Aligned_cols=115 Identities=45% Similarity=0.730 Sum_probs=105.5
Q ss_pred hcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccc
Q 007399 327 RKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406 (605)
Q Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~ 406 (605)
++|++|+.++++.++.+.....+ ..+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 47899998888777776554323 56899999999999999999999999999999999999999999999999999999
Q ss_pred eEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcc
Q 007399 407 QMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFL 456 (605)
Q Consensus 407 QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~l 456 (605)
|||||||| |+|++||||+|||+.||+|||||||++|
T Consensus 80 QmVAlN~Q--------------t~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 80 QMVALNFQ--------------TPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred eEeEeecC--------------CCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 99999999 9999999999999999999999999986
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs. |
| >PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=325.67 Aligned_cols=118 Identities=37% Similarity=0.644 Sum_probs=90.1
Q ss_pred hhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccc
Q 007399 325 EYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH 404 (605)
Q Consensus 325 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~ 404 (605)
||++|++|+.+..+.++...-.. ....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 68999998887766655442222 22568899999999999999999999999999999999999999999999999999
Q ss_pred cceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCccc
Q 007399 405 GAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLL 457 (605)
Q Consensus 405 G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr 457 (605)
|||||||||| |+|++||||+|||++||+|||||||++||
T Consensus 80 G~Q~vALN~Q--------------t~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 80 GCQMVALNFQ--------------TPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp T-SEEEB-TT--------------S-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cCccceeecc--------------CCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 9999999999 99999999999999999999999999997
|
1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B .... |
| >smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=306.02 Aligned_cols=134 Identities=46% Similarity=0.816 Sum_probs=128.2
Q ss_pred cCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007399 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (605)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (605)
|||++||+||||++|||||++|+|+.|+++..+|+++|.+||||+|||||++++ ++|+|+||+|+++.++|+|||++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999976 4699999999999999999999999
Q ss_pred hhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhh
Q 007399 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPES 243 (605)
Q Consensus 189 ~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~ 243 (605)
++||..+.|||||+||+||+.++|.+||++|+++||++|+.|+.. ....+|||+|
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
|
Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs. |
| >PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=287.49 Aligned_cols=143 Identities=29% Similarity=0.567 Sum_probs=128.9
Q ss_pred CCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhh
Q 007399 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEY 190 (605)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~ 190 (605)
|+.|+|||||++||||||+++|+.|++....|.++|..||||++||||++++ +++.|+||+++++.++|+|||++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999865 369999999999999999999999999
Q ss_pred hhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecCC
Q 007399 191 AFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTKP 254 (605)
Q Consensus 191 AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K~ 254 (605)
+|..+.+||||++++||+.++|..+|++|+++||+.|+.++.. ....+|+|++|||||||..||
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999997754 467899999999999999875
|
1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B .... |
| >cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins | Back alignment and domain information |
|---|
Probab=99.87 E-value=8e-22 Score=205.01 Aligned_cols=146 Identities=25% Similarity=0.433 Sum_probs=128.2
Q ss_pred cCCCCcccceeeeccCcccccC------------CCC--CCCCChHHHHHHHhCCccEEEEEeecCCC------------
Q 007399 109 HDMTAPVSHYFIYTGHNSYLTG------------NQL--NSDCSDVPIIRALQKGVRVIELDIWPNSK------------ 162 (605)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g------------~Ql--~g~SS~e~Y~~aL~~GCRcvElD~WdG~~------------ 162 (605)
.+.+.||+||++-.|||+|..| +|+ ...++-.....+|..|+|.+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 3567899999999999999998 777 44556667899999999999999996543
Q ss_pred -------CCCceEeeCCcc---cccchHHHHHHHHhhhhhc-cCCCceEEEeccCCCH------------HHHHHHHHHH
Q 007399 163 -------KDNVDVLHGGTM---TAPVELIKCLRSIKEYAFV-ASEYPVVITLEDHLTP------------DLQAKVAEMV 219 (605)
Q Consensus 163 -------~~~piv~HG~Tl---ts~i~f~dvi~aI~~~AF~-~S~yPvIlSlE~Hc~~------------~qQ~~ma~~~ 219 (605)
++...|+|+.++ |+..+|.+||+.||+++|. .++|||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 345789999998 8999999999999999998 7999999999999987 7899999999
Q ss_pred HHHhhc-cccCCCC-----CCC------CCCCChhhccCcEEEecCC
Q 007399 220 TQTLGE-ILFTPGS-----ECL------KEFPSPESLKRRIIISTKP 254 (605)
Q Consensus 220 ~~i~Gd-~L~~~~~-----~~~------~~lPSP~~Lk~KIlik~K~ 254 (605)
+++||+ +|++|+. ..+ ..+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999874 222 6899999999999999775
|
This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy |
| >cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC) | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-19 Score=161.61 Aligned_cols=125 Identities=43% Similarity=0.657 Sum_probs=108.9
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC-CcceeeccccCCCC-CCeeccEEEEeeecCCccEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~-D~~k~kTkvv~nn~-NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
..|+|+|++|++|+.. .....+..||||+|++.+.+. +..+.||+++.++. ||.|||+|.|.+..++.+.|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~----~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKP----KGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCC----CCCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 4699999999999641 111345679999999988665 56788999988774 99999999999998888899999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|||.+.. ++++||++.++++.|..||++++|+++.|++...++|+|+|++.
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~~ 128 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDIT 128 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEEC
Confidence 9999977 79999999999999999999999999999998899999999974
|
PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking |
| >cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-18 Score=176.73 Aligned_cols=143 Identities=22% Similarity=0.371 Sum_probs=121.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCC----------CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc-
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN----------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA- 176 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~----------g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts- 176 (605)
..||+.||++|+|-.|||+|..+..-. +....-.+...|..|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 469999999999999999999876532 233344678999999999999999864 4689999987654
Q ss_pred ------cchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-C---CCCCCChhhcc-
Q 007399 177 ------PVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-C---LKEFPSPESLK- 245 (605)
Q Consensus 177 ------~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~---~~~lPSP~~Lk- 245 (605)
...|++|++.|+++++....++|||.||+|++..++..+.++|+++||++||.|+.. . ....|+.++|+
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999999888899999999999999998642 1 46789999996
Q ss_pred -CcEEEec
Q 007399 246 -RRIIIST 252 (605)
Q Consensus 246 -~KIlik~ 252 (605)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 7766653
|
This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity. |
| >cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-17 Score=148.82 Aligned_cols=103 Identities=26% Similarity=0.368 Sum_probs=84.6
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCC--CCcceeeccccCCCCCCeeccEEEEeeec---CCccEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 551 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p--~D~~k~kTkvv~nn~NPvWNEtf~F~v~~---pela~Lr 551 (605)
+|+|+|++|++|+. .+ .+.+||||+|++.|.. ....+++|+++++++||+|||+|+|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~------~d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKW------QT-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCc------cc-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 48999999999963 12 2678999999998733 22345689999999999999999999974 3457899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 586 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~ 586 (605)
|.|+|+|..+++++||++.+||+++.++- .|.||.
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~ 111 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLG 111 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence 99999998888999999999999998664 577874
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi |
| >cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I | Back alignment and domain information |
|---|
Probab=99.66 E-value=7e-16 Score=140.97 Aligned_cols=115 Identities=23% Similarity=0.356 Sum_probs=94.7
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-----CCccEEEE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----PELALLRI 552 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-----pela~Lrf 552 (605)
++|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 5799999999963 23456789999999843 57799999999999999999999876 34578999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC--Cc---cEEEEccCCCCCcc-cCeEEEEEEE
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDRKGERY-KSVKLLMHFE 603 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr--~G---yR~IpL~d~~g~~l-~~atLlv~i~ 603 (605)
.|||++..+++++||++.+||+.+. +| .+|.+|.+..++.- ..+.|.|.|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999986 55 47899998776543 4578888874
|
Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member |
| >cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.7e-16 Score=138.85 Aligned_cols=113 Identities=29% Similarity=0.410 Sum_probs=92.9
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..+....|+|.|||+
T Consensus 2 L~V~vi~a~~L~~------~~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITK------GDLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCc------cCCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 7899999999963 2335678999999985432 3577999999999999999999998776567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCccE---EEEccCCCCCcccCeEEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.. ++++||++.+|++.+..|.+ +++|.+. +.+.|.++|++
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~ 117 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL 117 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence 987 79999999999999998865 5677643 25678888876
|
A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o |
| >cd08677 C2A_Synaptotagmin-13 C2 domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.6e-16 Score=140.09 Aligned_cols=99 Identities=18% Similarity=0.193 Sum_probs=82.9
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|+.|++|+. .+.+||||+|.+... ....+++|++.+++.||+|||+|.|.|...++ ..|.|
T Consensus 13 ~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL~~ 82 (118)
T cd08677 13 KAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTLTL 82 (118)
T ss_pred CCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEEEE
Confidence 4579999999999851 134799999998532 22457799999999999999999999987666 58999
Q ss_pred EEEeccCCCCCCccEEEEEECCcc--CCccEEE
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSEL--KQGIRAV 583 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sL--r~GyR~I 583 (605)
.|||+|.++++++||++.+|++++ ..|.+|+
T Consensus 83 ~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~W 115 (118)
T cd08677 83 TLRCCDRFSRHSTLGELRLKLADVSMMLGAAQW 115 (118)
T ss_pred EEEeCCCCCCCceEEEEEEccccccCCccccch
Confidence 999999999999999999999975 6777764
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain |
| >cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.1e-16 Score=159.35 Aligned_cols=144 Identities=22% Similarity=0.276 Sum_probs=125.1
Q ss_pred CCCCcccceeeeccCcccccCCCC-------CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007399 110 DMTAPVSHYFIYTGHNSYLTGNQL-------NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (605)
Q Consensus 110 DM~~PLs~YfI~SSHNTYL~g~Ql-------~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 182 (605)
+.+.||+++.|-.|||+|..+... .+.+.-..+...|..|+|++|||||..++.+++.|+||.......+|.|
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 468899999999999999887764 2344445678999999999999999876446789999988887899999
Q ss_pred HHHHHhhhhhccCCCceEEEeccCCCHHH---HHHHHHHHHHHhhccccCCCCCCCCCCCChhhcc-CcEEEecCC
Q 007399 183 CLRSIKEYAFVASEYPVVITLEDHLTPDL---QAKVAEMVTQTLGEILFTPGSECLKEFPSPESLK-RRIIISTKP 254 (605)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hc~~~q---Q~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk-~KIlik~K~ 254 (605)
|++.|+++.......+|||.||.+++... +..++++|+++||+.++.++ ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999999999999999998875 89999999999999999875 3346789999999 999998654
|
This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X |
| >cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.3e-15 Score=135.43 Aligned_cols=116 Identities=24% Similarity=0.370 Sum_probs=95.6
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
+|+|+|++|++|+. .+..+.+||||++.+.+ ...++|+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 38999999999963 23456789999999854 34679999999999999999999986554 679999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
+|..+++++||++.+|+..+..| ..+++|.++.+.. ..++|.+.+.|
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~-~~G~l~l~~~~ 119 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDE-DLGYISLVVTL 119 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCcc-CceEEEEEEEE
Confidence 99988899999999999999855 3588999888743 35688888765
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein |
| >cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-15 Score=137.85 Aligned_cols=97 Identities=27% Similarity=0.390 Sum_probs=82.6
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEee-ec--CCccEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SV--PELALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v-~~--pela~Lrf 552 (605)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~------~~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPL------LD-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCC------CC-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 569999999999964 23 4678999999998766566788999999999999999999987 32 23468999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
.|||+|..+++++||++.+||+.+..+
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccC
Confidence 999999888899999999999998755
|
There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut |
| >cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12 | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.7e-16 Score=144.02 Aligned_cols=113 Identities=19% Similarity=0.168 Sum_probs=92.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|+.|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~V~Vi~A~nL~~------~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~~ 87 (136)
T cd08406 14 AERLTVVVVKARNLVW------DNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLRV 87 (136)
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEEEE
Confidence 3469999999999963 234467899999999765444457789999999999999999999876554 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEE-EccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~I-pL~d~~g~~l 593 (605)
.|+|+|..+++++||++.++..+..+|++|+ .+++.-++++
T Consensus 88 ~V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~~v 129 (136)
T cd08406 88 TVAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRKPV 129 (136)
T ss_pred EEEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCCee
Confidence 9999998889999999999999888888875 5555545543
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl |
| >cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip) | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.9e-15 Score=134.06 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=93.3
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCCccEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+.|.|+|++|++++. .+ .+.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 469999999997632 23 56799999999843 5679999876 59999999999998654 35699999
Q ss_pred EeccCCCCCCccEEEEEECC-ccCCcc---EEEEccCCCCCcccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVS-ELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~-sLr~Gy---R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
||+|..+++++||.+.+||. .+.+|. .|.||...+|++.. +.|.+.+.|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~~-g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDKE-GMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCCc-eEEEEEEeC
Confidence 99999998999999999996 687774 68899988887644 577776653
|
Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian |
| >cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.3e-15 Score=135.35 Aligned_cols=117 Identities=21% Similarity=0.265 Sum_probs=93.1
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc---cEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIE 553 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf~ 553 (605)
+|+|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++. ..|+|.
T Consensus 1 ~L~V~vi~A~~L~~------~d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMP------KDGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 48999999999963 23346689999999864 56799999999999999999999875432 579999
Q ss_pred EEeccCCC-CCCccEEEEEECCccC-Cc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 554 VHEYDMSE-KDDFGGQTCLPVSELK-QG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 554 V~D~D~~~-~ddflGq~~lpL~sLr-~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|||.+..+ +++|||++.+|++.+. +| .+|.+|..+.......+.|.++|.|
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 125 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYI 125 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEE
Confidence 99998775 7999999999999986 45 5678997653333345788888876
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates |
| >cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.61 E-value=1e-14 Score=131.32 Aligned_cols=117 Identities=24% Similarity=0.382 Sum_probs=98.2
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|+|+|++|++|+. .+..+..||||+|.+.+ .+.+|++++++.||.|||+|.|.+... ...|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~d 69 (119)
T cd08377 2 FLQVKVIRASGLAA------ADIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVYD 69 (119)
T ss_pred EEEEEEEeeeCCCC------CCCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEEE
Confidence 58999999999963 23445689999999854 356999999999999999999997542 3579999999
Q ss_pred ccCCCCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
++..+++++||++.+|+..+..|. +|.+|.+..+.....++|.+.++|+
T Consensus 70 ~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~~ 119 (119)
T cd08377 70 EDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDVI 119 (119)
T ss_pred CCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEeC
Confidence 998778999999999999998775 5779998877776788999999986
|
MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran |
| >cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.8e-15 Score=139.08 Aligned_cols=116 Identities=22% Similarity=0.346 Sum_probs=95.8
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
|+|+|++|++|+. .+.++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+..+....|.|.|+|
T Consensus 2 L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~d 70 (150)
T cd04019 2 LRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVED 70 (150)
T ss_pred EEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEEE
Confidence 8999999999963 24457789999999854 5778998877 5999999999999876655789999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc-------cEEEEccCCCC-----Cc-ccCeEEEEEEEE
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKG-----ER-YKSVKLLMHFEF 604 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~G-------yR~IpL~d~~g-----~~-l~~atLlv~i~f 604 (605)
++..+++++||++.+||+.+..| -+|.||.+..| ++ ...+.|.|+|.|
T Consensus 71 ~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~ 131 (150)
T cd04019 71 RVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCL 131 (150)
T ss_pred ecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEe
Confidence 99877899999999999998644 57999998865 22 345788888876
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates |
| >cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.7e-15 Score=135.06 Aligned_cols=114 Identities=24% Similarity=0.310 Sum_probs=90.3
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|+|+|++|++++.- ...+..+.+||||.|.+.+ .+.||+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d 71 (126)
T cd08379 1 ILEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFD 71 (126)
T ss_pred CeEEEEEEeECCccc---cccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEE
Confidence 389999999994210 1134557889999999733 5779999999999999999999997654 479999999
Q ss_pred ccCCC------CCCccEEEEEECCccCCccE---EEEccCCCCCcc-cCeEEE
Q 007399 557 YDMSE------KDDFGGQTCLPVSELKQGIR---AVPLHDRKGERY-KSVKLL 599 (605)
Q Consensus 557 ~D~~~------~ddflGq~~lpL~sLr~GyR---~IpL~d~~g~~l-~~atLl 599 (605)
++..+ ++++||++.+||+.+..|.+ ++||.+.++... ..+.|-
T Consensus 72 ~d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 72 NSQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 98763 79999999999999998854 789998775554 445553
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate |
| >cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD) | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=138.37 Aligned_cols=125 Identities=26% Similarity=0.411 Sum_probs=99.7
Q ss_pred cceEEEEEEecccccc-CCC------------C---C--------ccCCCCCCCceEEEEEecCCCCcceeeccccCCCC
Q 007399 475 KKTLKVTVYMGEGWYY-DFP------------H---T--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 530 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~-~~~------------~---~--------~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~ 530 (605)
.++|.|+|+.|++|+. +.. . . .....+.+||||+|.+.+ ....||+++.++.
T Consensus 6 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~----~~~~rT~v~~~~~ 81 (158)
T cd04015 6 HGTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAG----ARVARTRVIENSE 81 (158)
T ss_pred eeeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECC----eEeeEEEEeCCCC
Confidence 3569999999999973 100 0 0 002345689999999865 2346899999999
Q ss_pred CCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCCCCCccc-CeEEEEEEEEC
Q 007399 531 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI 605 (605)
Q Consensus 531 NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l~-~atLlv~i~f~ 605 (605)
||+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++.+..|. +|++|.+..|+++. .+.|.|+++|+
T Consensus 82 nP~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 82 NPVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CCccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 999999999988654 357999999999775 689999999999998775 68999999999885 58999999985
|
PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic |
| >cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5 | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.8e-15 Score=135.18 Aligned_cols=107 Identities=21% Similarity=0.352 Sum_probs=85.6
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|.|+|++|++|+.. . ...+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~Vi~a~~L~~~---~--~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~~ 88 (125)
T cd04029 14 TQSLNVHVKECRNLAYG---D--EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQL 88 (125)
T ss_pred CCeEEEEEEEecCCCcc---C--CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 35699999999999631 1 12356899999998653333457799999999999999999999876544 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---cEEEEcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLH 586 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~ 586 (605)
.|||+|..+++++||++.++|.++... -+|+||.
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l~ 125 (125)
T cd04029 89 SVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPLH 125 (125)
T ss_pred EEEECCCCCCCcEEEEEEEeCCcccccCCcccEEECc
Confidence 999999888899999999999998533 4677873
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2 |
| >cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2 | Back alignment and domain information |
|---|
Probab=99.59 E-value=9e-15 Score=133.82 Aligned_cols=104 Identities=19% Similarity=0.241 Sum_probs=84.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCC-CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~-s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
..|.|+|+.|++|+. .+.. +.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~L~V~vi~a~~L~~------~d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~~ 88 (125)
T cd08393 15 RELHVHVIQCQDLAA------ADPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLNL 88 (125)
T ss_pred CEEEEEEEEeCCCCC------cCCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 469999999999964 1222 56899999999765544567899999999999999999999875444 48999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---cEEEEc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPL 585 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL 585 (605)
.|||+|..+++++||++.+||..+..+ -.|.+|
T Consensus 89 ~V~d~~~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L 124 (125)
T cd08393 89 SVWHRDSLGRNSFLGEVEVDLGSWDWSNTQPTWYPL 124 (125)
T ss_pred EEEeCCCCCCCcEeEEEEEecCccccCCCCcceEEC
Confidence 999999888899999999999998544 245555
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety |
| >cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.8e-15 Score=137.10 Aligned_cols=114 Identities=13% Similarity=0.199 Sum_probs=89.6
Q ss_pred CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCC-CCCeeccEEEEeeecCCcc-EE
Q 007399 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELA-LL 550 (605)
Q Consensus 473 p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn-~NPvWNEtf~F~v~~pela-~L 550 (605)
|....|+|+|+.|++|+. .+....+||||+|++.+.+.+..|+||++++++ .||+|||+|.|+|..++.. .|
T Consensus 11 p~~~rLtV~VikarnL~~------~~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l 84 (135)
T cd08692 11 AVNSRIQLQILEAQNLPS------SSTPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQF 84 (135)
T ss_pred CcCCeEEEEEEEccCCCc------ccCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEE
Confidence 445679999999999963 112345699999999988888788999999999 5799999999999876553 67
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccC-CccEEE-EccCCCCCc
Q 007399 551 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGIRAV-PLHDRKGER 592 (605)
Q Consensus 551 rf~V~D~D~~~~ddflGq~~lpL~sLr-~GyR~I-pL~d~~g~~ 592 (605)
.+.|||.|..+++++||++.++.++.. .|.+|+ .+++.-+++
T Consensus 85 ~v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~m~~~pr~~ 128 (135)
T cd08692 85 LIKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQWKDTIANPEKV 128 (135)
T ss_pred EEEEEeCCCCcCCceEEEEEECCccCCchhhhhHHHHHhCCCCe
Confidence 888999988888999999999998753 456665 555444444
|
Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho |
| >cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3) | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-14 Score=137.31 Aligned_cols=108 Identities=23% Similarity=0.276 Sum_probs=88.4
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-----------C
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----------P 545 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-----------p 545 (605)
+|.|+|+.|++|+. ..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. |
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 38999999999953 2356899999999875555567899999999999999999999851 1
Q ss_pred --C--ccEEEEEEEeccCCCCCCccEEEEEECCccCCc----cEEEEccCCCCCc
Q 007399 546 --E--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGER 592 (605)
Q Consensus 546 --e--la~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~G----yR~IpL~d~~g~~ 592 (605)
+ ...|.|.|||++..++++|||++.||+..+..+ -.|.+|.+.....
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2 357999999999877899999999999999876 3588997665554
|
RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain |
| >cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42) | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-14 Score=132.36 Aligned_cols=122 Identities=25% Similarity=0.370 Sum_probs=95.9
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCC-C-CcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-A-DTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p-~-D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.|+|+|++|++|+. .+..+.+||||+|.+.+.. . ...+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~------~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAK------KDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCc------ccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 38999999999963 2345678999999997642 1 12356899999999999999999998643 45789999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc---------cEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG---------IRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G---------yR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
||++..+++++||++.++++++..+ -+|.||....+..-..+.|.+.+.|.
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~~ 133 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAYL 133 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEeeC
Confidence 9999888899999999999998643 25778886544444567999999874
|
Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3 | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-14 Score=133.84 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=85.3
Q ss_pred ceEEEEEEeccccccCCCCCccCC-CCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~-~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
..|.|+|+.|++|+. .+. .+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~V~~a~nL~~------~d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L~v 88 (128)
T cd08392 15 SCLEITIKACRNLAY------GDEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQLQV 88 (128)
T ss_pred CEEEEEEEecCCCCc------cCCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEEEE
Confidence 569999999999963 122 266899999999765555568899999999999999999999876544 58999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc------cEEEEc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPL 585 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G------yR~IpL 585 (605)
.|||.+..+++++||++.|||+.+.-. .+|.||
T Consensus 89 ~V~~~~~~~~~~~lG~~~i~L~~~~~~~~~~~~~~W~~l 127 (128)
T cd08392 89 SVWHSRTLKRRVFLGEVLIPLADWDFEDTDSQRFLWYPL 127 (128)
T ss_pred EEEeCCCCcCcceEEEEEEEcCCcccCCCCccccceEEC
Confidence 999999888899999999999988432 356665
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids |
| >cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13 | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.8e-15 Score=138.79 Aligned_cols=115 Identities=19% Similarity=0.168 Sum_probs=90.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|+.|++|+. ...+....+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~V~karnL~~----~d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~~ 89 (138)
T cd08407 14 ANRLLVVVIKAKNLHS----DQLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSVEL 89 (138)
T ss_pred CCeEEEEEEEecCCCc----cccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEEEE
Confidence 4569999999999964 11112233799999999765444457899999999999999999999886655 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEE-EccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~I-pL~d~~g~~l 593 (605)
+|+|+|..+++++||++.+++.+-.++.+|+ .+++.-++++
T Consensus 90 ~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~~v 131 (138)
T cd08407 90 EVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRRQI 131 (138)
T ss_pred EEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCCch
Confidence 9999999999999999999999876666655 5555555543
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy |
| >cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-14 Score=134.59 Aligned_cols=108 Identities=21% Similarity=0.223 Sum_probs=87.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|.|+|+.|++|+.. .+..+.+||||++.+.+......++||++++++.||+|||+|.|.+. .....|.|.||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 4699999999999531 12345689999999976444445889999999999999999999998 45568999999
Q ss_pred -eccCCCCCCccEEEEEECCccCCcc---EEEEccCCC
Q 007399 556 -EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 589 (605)
Q Consensus 556 -D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~ 589 (605)
|++..+++++||++.++|+.+..+. .|.+|.+..
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~~ 140 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPTS 140 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCcc
Confidence 6777788999999999999996553 577887653
|
RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as |
| >cd04041 C2A_fungal C2 domain first repeat; fungal group | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-14 Score=130.07 Aligned_cols=102 Identities=19% Similarity=0.170 Sum_probs=85.4
Q ss_pred eEEEEEEeccccccCCCCCccCCC-CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC---ccEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 552 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~-s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe---la~Lrf 552 (605)
.|+|+|++|++|+. .+.. +.+||||+|.+.+.. ....+|++++++.||+|||+|.|.+..++ ...|.|
T Consensus 2 ~L~V~v~~a~~L~~------~d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~ 73 (111)
T cd04041 2 VLVVTIHRATDLPK------ADFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLSC 73 (111)
T ss_pred EEEEEEEEeeCCCc------ccCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEEE
Confidence 58999999999963 2334 568999999986532 34679999999999999999999887653 368999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEEEcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 586 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~ 586 (605)
.|||+|..+++++||++.+++..|.+--+|.||+
T Consensus 74 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 74 RLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 9999998888999999999999998777888875
|
C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan |
| >cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.2e-14 Score=128.11 Aligned_cols=113 Identities=26% Similarity=0.322 Sum_probs=90.7
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+++|+++.+ +.||+|||+|.|.+..+....|.|.||
T Consensus 2 ~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v~ 70 (118)
T cd08681 2 TLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAVF 70 (118)
T ss_pred EEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEEE
Confidence 59999999999963 24456789999999854 4678988765 689999999999998766678999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|++..+ +++||++.++++.+..| -.|.+|.+. |+ ..+.|.+++.|
T Consensus 71 d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~~-~~--~~G~i~l~l~f 118 (118)
T cd08681 71 DDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTLK-GR--YAGEVYLELTF 118 (118)
T ss_pred eCCCCC-CcceEEEEEecHHHhhcCCCCCcEEeccC-Cc--EeeEEEEEEEC
Confidence 999766 89999999999987544 457788753 33 34688888875
|
Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr |
| >cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.3e-14 Score=126.29 Aligned_cols=110 Identities=24% Similarity=0.364 Sum_probs=90.1
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+..+.+||||++.+.+ .+.+|++++++.||.|||+|.|.+..+....|.|.|||+
T Consensus 2 ~~V~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPP------MDDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCC------CCCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999963 23346789999999843 567899999999999999999998766567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCcc---EEEEccCCCCCcccCeEEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
+..+++++||++.++|+.+..+- .|++|.+. .+.|++.+.+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~ 114 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTL 114 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEe
Confidence 98888999999999999987653 36688764 2567776654
|
MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei |
| >cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset | Back alignment and domain information |
|---|
Probab=99.55 E-value=5e-14 Score=128.25 Aligned_cols=110 Identities=29% Similarity=0.395 Sum_probs=92.2
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. . .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~V~Vi~a~~L~~------~----~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPA------N----SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCc------c----cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 8999999999953 1 479999999843 477999999999999999999998766667899999999
Q ss_pred cCCCCCCccEEEEEECCccCC--------ccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQ--------GIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~--------GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.. ++++||++.++++.+.. .-+|.+|.+..+.. ..+.|.+.|+|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~-~~G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGR-VGGELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCc-cceEEEEEEEe
Confidence 976 68999999999999853 24899999887733 34688888887
|
MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate |
| >cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD) | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.5e-14 Score=127.79 Aligned_cols=97 Identities=14% Similarity=0.075 Sum_probs=78.6
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVH 555 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~V~ 555 (605)
.|.|+|++|++|+.. +........+||||+|.+. ..++||++++++.||+|||+|.|.+...+. ..|.|.||
T Consensus 2 ~l~v~v~~A~~L~~~--~~~~~~~~~~DPYv~v~~~-----~~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V~ 74 (108)
T cd04039 2 VVFMEIKSITDLPPL--KNMTRTGFDMDPFVIISFG-----RRVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKVL 74 (108)
T ss_pred EEEEEEEeeeCCCCc--cccCCCCCccCceEEEEEC-----CEeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEEE
Confidence 589999999999631 0001112347999999973 256799999999999999999999876554 47999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
|+|..+++++||++.++|+.|..|+
T Consensus 75 D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 75 DKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred ECCCCCCCcceEEEEEEHHHHHhhC
Confidence 9998888999999999999998776
|
PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM |
| >cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4 | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-14 Score=135.04 Aligned_cols=113 Identities=20% Similarity=0.185 Sum_probs=91.7
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~ 87 (136)
T cd08404 14 TNRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEF 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 3569999999999963 244567899999998754333456789999999999999999999875443 46899
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEE-EccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~I-pL~d~~g~~l 593 (605)
.|||+|..+++++||++.+++.+...|.+++ +|.+..|+++
T Consensus 88 ~v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 88 LVLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 9999999888999999999999977777665 6677778775
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s |
| >cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.1e-14 Score=127.34 Aligned_cols=105 Identities=24% Similarity=0.334 Sum_probs=83.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-CC--ccEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-PE--LALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-pe--la~Lr 551 (605)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. .+ ...|+
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l~ 88 (125)
T cd04031 15 TSQLIVTVLQARDLPP------RDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTLE 88 (125)
T ss_pred CCEEEEEEEEecCCCC------cCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEEE
Confidence 3569999999999953 233467899999999765445567899999999999999999998643 22 36899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC--CccEEEEc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK--QGIRAVPL 585 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr--~GyR~IpL 585 (605)
|.|||++..+++++||++.++|+... .+-.|.||
T Consensus 89 ~~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~L 124 (125)
T cd04031 89 VTVWDYDRDGENDFLGEVVIDLADALLDDEPHWYPL 124 (125)
T ss_pred EEEEeCCCCCCCcEeeEEEEecccccccCCcceEEC
Confidence 99999998888999999999999732 22456665
|
RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as |
| >cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1) | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=126.81 Aligned_cols=115 Identities=19% Similarity=0.273 Sum_probs=92.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|+|+|++|++|+. . +.+||||+|.+.+ ....||++. ++.||.|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~----~-----~~~DPYv~v~l~~----~~~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPV----K-----HVPHPYCVISLNE----VKVARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCC----C-----CCCCeeEEEEECC----EeEEEeecC-CCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 359999999999963 1 2469999999954 234678864 5799999999999977666667889999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc---EEEEccCCCC-CcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG-ERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g-~~l~~atLlv~i~f 604 (605)
|++..+++++||++.+||..+.+|. .|.+|....+ ..-..+.|.+++.|
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~ 122 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARY 122 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEE
Confidence 9998888999999999999998886 4788876654 22345788888877
|
RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki |
| >cd08680 C2_Kibra C2 domain found in Human protein Kibra | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.8e-14 Score=129.80 Aligned_cols=97 Identities=21% Similarity=0.351 Sum_probs=80.7
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
...|.|+|+.|++|+. .+..+.+||||+|.+.+.... ..++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~L~V~V~~arnL~~------~~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~ 86 (124)
T cd08680 13 DSSLVISVEQLRNLSA------LSIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQ 86 (124)
T ss_pred CCEEEEEEeEecCCcc------cccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCEEE
Confidence 3469999999999963 133456899999999654332 357899999999999999999999877665 4899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.||+.+..+++++||++.++|+.+.
T Consensus 87 ~~V~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 87 VDVCSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEEeCCCCCceeEEEEEEEEhhhcc
Confidence 99999998888999999999999884
|
Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom |
| >cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1 | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-14 Score=133.16 Aligned_cols=113 Identities=19% Similarity=0.237 Sum_probs=91.0
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 14 ~~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 87 (136)
T cd08402 14 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLIV 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999963 234567899999998654334456789999999999999999999875554 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEE-EEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~-IpL~d~~g~~l 593 (605)
.|||++..+++++||++.+++.+...++.| .+|+...++++
T Consensus 88 ~v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~~ 129 (136)
T cd08402 88 TVLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRPI 129 (136)
T ss_pred EEEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCee
Confidence 999999888899999999999998777754 47776666654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: |
| >cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.7e-14 Score=126.91 Aligned_cols=116 Identities=24% Similarity=0.319 Sum_probs=92.6
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|+|++|++|+. ..+.+||||.+.+.+ ...++||+++.++.||+|||+|.|.+.. +...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~~-~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELSP-NSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeCC-CCCEEEEEEEEC
Confidence 5799999999852 346789999999742 1346799999999999999999999853 346799999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---cEEEEccCCCCC-cccCeEEEEEEEEC
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGE-RYKSVKLLMHFEFI 605 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~-~l~~atLlv~i~f~ 605 (605)
+..+++++||++.++++.+..+ -.++||....++ .-..++|.+++.|+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~ 120 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFM 120 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEe
Confidence 9888899999999999998754 346788766443 22467999999884
|
The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a |
| >cd08375 C2_Intersectin C2 domain present in Intersectin | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=128.69 Aligned_cols=113 Identities=25% Similarity=0.413 Sum_probs=90.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|++|+. .+..+.+||||+|.+. ..++||++++++.||.|||+|.|.+..+....|.|.||
T Consensus 15 G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~-----~~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V~ 83 (136)
T cd08375 15 GRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMG-----SQEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITVF 83 (136)
T ss_pred EEEEEEEEEeeCCCC------CCCCCCcCcEEEEEEC-----CEeeeccccCCCCCCccCceEEEEecCccCCEEEEEEE
Confidence 579999999999853 2345678999999973 25789999999999999999999998777788999999
Q ss_pred eccCCCCCCccEEEEEECCccCC------c--cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQ------G--IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~------G--yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|+|..+++++||++.+++.++.. + +++++|. ....+.+.+.|.|
T Consensus 84 D~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~-----~~~~g~i~l~~~~ 135 (136)
T cd08375 84 DRDFFSPDDFLGRTEIRVADILKETKESKGPITKRLLLH-----EVPTGEVVVKLDL 135 (136)
T ss_pred ECCCCCCCCeeEEEEEEHHHhccccccCCCcEEEEeccc-----cccceeEEEEEEe
Confidence 99988889999999999999864 2 2455553 2233456666654
|
A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro |
| >cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.7e-14 Score=123.88 Aligned_cols=96 Identities=27% Similarity=0.362 Sum_probs=81.6
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++...|.|.|+|+
T Consensus 2 L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPL------AKSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCC------cccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 8899999999964 23346789999999865 677899999999999999999999988888999999998
Q ss_pred cCCCCCCccEEEEEECCccCCc-----cEEEEccC
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG-----IRAVPLHD 587 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G-----yR~IpL~d 587 (605)
+. +++||++.++|..+..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999988643 36778864
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm |
| >cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.3e-14 Score=126.61 Aligned_cols=103 Identities=23% Similarity=0.288 Sum_probs=83.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|++|++|+. .+..+..||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~------~d~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 86 (124)
T cd08385 15 SNQLTVGIIQAADLPA------MDMGGTSDPYVKVYLLP--DKKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLVF 86 (124)
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCCEEEEEEEc--CCCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEEE
Confidence 3569999999999963 23345689999999864 33457799999999999999999999876544 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---EEEEc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 585 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL 585 (605)
.|||+|..+++++||++.+||+.+..|. .|.+|
T Consensus 87 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~~~W~~l 122 (124)
T cd08385 87 SVYDFDRFSKHDLIGEVRVPLLTVDLGHVTEEWRDL 122 (124)
T ss_pred EEEeCCCCCCCceeEEEEEecCcccCCCCcceEEEc
Confidence 9999998888999999999999986553 34454
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and |
| >cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-13 Score=123.74 Aligned_cols=111 Identities=29% Similarity=0.458 Sum_probs=90.7
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++++. .+..+..||||+|.+.+ ...++|+++.++.||.|||+|.|.+.......|.|.|||+
T Consensus 1 l~v~vi~a~~L~~------~~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPS------ADRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCC------CCCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 5799999999863 12345679999999865 3457899999999999999999998765567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLM 600 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv 600 (605)
+..+++++||++.+++..+..| .+++||....|.. .++||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999887 6789998766654 345664
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd08373 C2A_Ferlin C2 domain first repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-13 Score=125.43 Aligned_cols=109 Identities=27% Similarity=0.382 Sum_probs=91.3
Q ss_pred EEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC--CccEEEEEEEeccC
Q 007399 482 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDM 559 (605)
Q Consensus 482 Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D~ 559 (605)
|++|++|+. ..+..||||+|.+.+ .+++|++++++.||+|||+|.|.+..+ +...|.|.|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888842 345689999999854 467999999999999999999998754 45789999999998
Q ss_pred CCCCCccEEEEEECCccCCcc---EEEEccCCCCCcccCeEEEEEEEE
Q 007399 560 SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 560 ~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
.+++++||++.++|+.+..+. .++||.+..+.++. +.|.+.+.|
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~ 115 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSY 115 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEE
Confidence 888999999999999987664 47899999888765 688888876
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-13 Score=124.65 Aligned_cols=114 Identities=25% Similarity=0.318 Sum_probs=89.4
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|+++.++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~v~vi~a~~L~~------~d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d~ 70 (123)
T cd04025 2 LRCHVLEARDLAP------KDRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWDW 70 (123)
T ss_pred EEEEEEEeeCCCC------CCCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEEC
Confidence 8999999999853 23345689999999743 467899999999999999999998876667899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCc----ccCeEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGER----YKSVKLLMHF 602 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~----l~~atLlv~i 602 (605)
+..+++++||++.++|..+..+ -.|..|.....+. -..++|.+.|
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~~G~l~~~~ 122 (123)
T cd04025 71 DLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPDPRAEEESGGNLGSLRLKV 122 (123)
T ss_pred CCCCCCcEeEEEEEEHHHcccCCCCCCEEECCCCCCCCccccCceEEEEEEe
Confidence 9888899999999999998654 3567776533321 1235666655
|
RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a |
| >cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=125.47 Aligned_cols=105 Identities=28% Similarity=0.352 Sum_probs=84.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~i 88 (127)
T cd04030 15 RQKLIVTVHKCRNLPP------CDSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88 (127)
T ss_pred CCEEEEEEEEEECCCC------ccCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEEE
Confidence 3569999999999963 233567899999999765444567899999999999999999999865543 57999
Q ss_pred EEEeccCC--CCCCccEEEEEECCccCCcc---EEEEc
Q 007399 553 EVHEYDMS--EKDDFGGQTCLPVSELKQGI---RAVPL 585 (605)
Q Consensus 553 ~V~D~D~~--~~ddflGq~~lpL~sLr~Gy---R~IpL 585 (605)
.|||.+.. +++++||++.++|..|..+. +|.+|
T Consensus 89 ~v~~~~~~~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 126 (127)
T cd04030 89 AVKNSKSFLSREKKLLGQVLIDLSDLDLSKGFTQWYDL 126 (127)
T ss_pred EEEECCcccCCCCceEEEEEEecccccccCCccceEEC
Confidence 99999864 67899999999999985443 35554
|
KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1 |
| >cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-14 Score=130.37 Aligned_cols=113 Identities=19% Similarity=0.263 Sum_probs=89.0
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+..+++ ..|.|
T Consensus 12 ~~~L~V~Vi~a~~L~~------~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~~ 85 (133)
T cd08384 12 RRGLIVGIIRCVNLAA------MDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLEI 85 (133)
T ss_pred CCEEEEEEEEEcCCCC------cCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEEE
Confidence 4569999999999963 234467899999999764434456799999999999999999999876654 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccE-EEEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR-~IpL~d~~g~~l 593 (605)
.|||+|..+++++||++.+++.+..+... |..++..-++++
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~~ 127 (133)
T cd08384 86 TVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKKI 127 (133)
T ss_pred EEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCCh
Confidence 99999988889999999999987544433 446666556654
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai |
| >KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.3e-14 Score=132.62 Aligned_cols=92 Identities=28% Similarity=0.440 Sum_probs=80.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|.+|.. .|..+.+||||.+++.+ ++.||+++.+|.||+|||+|+|.+..+ ...|.+.||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~-~~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDP-NTPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCC-CceEEEEEE
Confidence 469999999999853 34446789999999865 688999999999999999999999887 457999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
|+|.++++||+|.+.|||..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999988654
|
|
| >cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.2e-14 Score=126.58 Aligned_cols=97 Identities=16% Similarity=0.218 Sum_probs=79.8
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 554 (605)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~------~~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRS------TN-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCC------CC-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 569999999999853 23 357899999999765555567799999999999999999999865443 4688999
Q ss_pred EeccCCC-CCCccEEEEEECCccCCc
Q 007399 555 HEYDMSE-KDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 555 ~D~D~~~-~ddflGq~~lpL~sLr~G 579 (605)
||.+... ++++||++.||+..+..|
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~ 110 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQ 110 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccC
Confidence 9998764 478999999999998655
|
This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho |
| >cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.8e-14 Score=124.59 Aligned_cols=99 Identities=25% Similarity=0.330 Sum_probs=83.0
Q ss_pred EEEEEEeccccccCCCCCccC-CCCCCCceEEEEEecCCCCcceeeccccCCCCCCee-ccEEEEeeecCCc--cEEEEE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL--ALLRIE 553 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d-~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvW-NEtf~F~v~~pel--a~Lrf~ 553 (605)
|+|+|++|++|+. .+ ..+.+||||+|.+.+ .++||++++++.||.| ||+|.|.+..+++ ..|.|.
T Consensus 1 l~V~v~~a~~L~~------~d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~ 69 (110)
T cd08688 1 LKVRVVAARDLPV------MDRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR 69 (110)
T ss_pred CEEEEEEEECCCc------cccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence 6899999999963 12 235679999999843 6789999999999999 9999999977654 589999
Q ss_pred EEeccCCCCCCccEEEEEECCccCC---cc---EEEEccC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHD 587 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~---Gy---R~IpL~d 587 (605)
|||+|..+++++||++.+++..|.. +. +|.+|+|
T Consensus 70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~ 109 (110)
T cd08688 70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYD 109 (110)
T ss_pred EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEccc
Confidence 9999988889999999999999865 33 5788887
|
The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a |
| >cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-13 Score=124.37 Aligned_cols=113 Identities=20% Similarity=0.355 Sum_probs=90.9
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+.++.+||||+|.+.| ...+||++++++.||+|||+|.|.+.. ...|.|.|||+
T Consensus 2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d~ 69 (123)
T cd08382 2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFDQ 69 (123)
T ss_pred eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEEC
Confidence 8999999999853 24457789999999854 356789999999999999999999854 56899999999
Q ss_pred cCCCC--CCccEEEEEECCccC-C---ccEEEEccCCCCC--cccCeEEEEEE
Q 007399 558 DMSEK--DDFGGQTCLPVSELK-Q---GIRAVPLHDRKGE--RYKSVKLLMHF 602 (605)
Q Consensus 558 D~~~~--ddflGq~~lpL~sLr-~---GyR~IpL~d~~g~--~l~~atLlv~i 602 (605)
+..++ +++||++.++++.|. . +..|.||++.... ....++|.+++
T Consensus 70 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 70 KKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 87664 479999999999974 2 3679999776653 23357888875
|
A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are |
| >cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8 | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.8e-13 Score=124.48 Aligned_cols=103 Identities=21% Similarity=0.309 Sum_probs=83.3
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 553 (605)
+.|+|+|++|++|+. .+..+.+||||+|.+. +....++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 16 ~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~i~ 87 (124)
T cd08387 16 GILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLEVL 87 (124)
T ss_pred CEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEEEE
Confidence 569999999999963 2344678999999984 333456799999999999999999999875543 479999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---EEEEcc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 586 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~ 586 (605)
|||+|..+++++||++.++|+.+..|- .|.+|.
T Consensus 88 V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~l~ 123 (124)
T cd08387 88 LYDFDQFSRDECIGVVELPLAEVDLSEKLDLWRKIQ 123 (124)
T ss_pred EEECCCCCCCceeEEEEEecccccCCCCcceEEECc
Confidence 999998888999999999999997553 345553
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv |
| >cd04018 C2C_Ferlin C2 domain third repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-13 Score=130.56 Aligned_cols=107 Identities=24% Similarity=0.363 Sum_probs=82.6
Q ss_pred eEEEEEEeccccccCCCCC--------ccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-
Q 007399 477 TLKVTVYMGEGWYYDFPHT--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL- 547 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~--------~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel- 547 (605)
+|.|+|+.|++|+.-.... -.+..+.+||||+|.+.| .+.||++++++.||+|||+|.|.+..|+.
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~ 75 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC 75 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence 3789999999997410000 001224679999999866 45689999999999999999999877765
Q ss_pred cEEEEEEEeccCCCCCCccEEEEEECCccCC-c---------cEEEEccCC
Q 007399 548 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-G---------IRAVPLHDR 588 (605)
Q Consensus 548 a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~-G---------yR~IpL~d~ 588 (605)
..|.|+|||+|..+++++||++.++|..+.. | -+|+.|++.
T Consensus 76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~ 126 (151)
T cd04018 76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS 126 (151)
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence 4899999999988889999999999998742 2 266777654
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10 | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.5e-14 Score=129.81 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=90.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||.|||+|.|.+...++ ..|.|
T Consensus 13 ~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~~ 86 (134)
T cd08403 13 AGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLII 86 (134)
T ss_pred CCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999963 244567899999998643333456789999999999999999999864443 46899
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEE-EccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~I-pL~d~~g~~l 593 (605)
.|||+|..+++++||++.+|+.....|++++ .|....|+++
T Consensus 87 ~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 87 AVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 9999999888999999999999877887654 6666666654
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind |
| >cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-13 Score=123.55 Aligned_cols=105 Identities=20% Similarity=0.286 Sum_probs=83.6
Q ss_pred cceEEEEEEeccccccCCCCCccC-CCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d-~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
...|+|+|++|++|+. .+ ..+..||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~L~V~v~~a~~L~~------~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l~ 86 (123)
T cd08521 13 TGSLEVHIKECRNLAY------ADEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTLQ 86 (123)
T ss_pred CCEEEEEEEEecCCCC------cCCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 3569999999999963 12 3356899999998653333356899999999999999999999876543 5899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc---cEEEEc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPL 585 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL 585 (605)
|.|||++..+++++||++.++|+.+..| -.|.||
T Consensus 87 i~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~l 123 (123)
T cd08521 87 LSVWHHDRFGRNTFLGEVEIPLDSWDLDSQQSEWYPL 123 (123)
T ss_pred EEEEeCCCCcCCceeeEEEEecccccccCCCccEEEC
Confidence 9999999888899999999999999644 245554
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into |
| >cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17 | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.9e-14 Score=130.11 Aligned_cols=112 Identities=17% Similarity=0.172 Sum_probs=86.9
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 553 (605)
+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~~~ 87 (135)
T cd08410 14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFKVPQEELENVSLVFT 87 (135)
T ss_pred CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEeCCHHHhCCCEEEEE
Confidence 569999999999963 244567899999998542222345789999999999999999999876555 369999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc--cEEEEccCCCCCcc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRKGERY 593 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~G--yR~IpL~d~~g~~l 593 (605)
|||+|..+++++||++.|...+.... -.|-.|++..++++
T Consensus 88 V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 88 VYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred EEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 99999888999999998877665542 23457777777765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta- |
| >cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.49 E-value=4e-13 Score=122.33 Aligned_cols=117 Identities=22% Similarity=0.315 Sum_probs=93.9
Q ss_pred eEEEEEEeccccccCCCCCccCC--CCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDA--YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~--~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.|+|+|++|++|+. .+. .+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v 70 (128)
T cd04024 2 VLRVHVVEAKDLAA------KDRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLIL 70 (128)
T ss_pred EEEEEEEEeeCCCc------ccCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEE
Confidence 58999999999963 233 46789999998732 567999999999999999999999875567899999
Q ss_pred EeccCCCCCCccEEEEEECCccC----Cc--cEEEEccCCCCC--cccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELK----QG--IRAVPLHDRKGE--RYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr----~G--yR~IpL~d~~g~--~l~~atLlv~i~f 604 (605)
||++..+.+++||++.+++..+. .| -.|++|.+.... ....++|.++|.|
T Consensus 71 ~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 71 WDKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred EECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 99998878999999999999885 23 367888876332 2345788888865
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu |
| >cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11 | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.6e-13 Score=124.73 Aligned_cols=94 Identities=22% Similarity=0.331 Sum_probs=76.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCC-CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 551 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~-s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~Lr 551 (605)
..|+|+|++|++|+. .+.. +.+||||+|.+.+ .+..+.||++++++.||+|||+|.|. +...++ ..|+
T Consensus 16 ~~L~V~Vi~a~~L~~------~~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L~ 87 (128)
T cd08388 16 KALLVNIIECRDLPA------MDEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSLH 87 (128)
T ss_pred CEEEEEEEEeECCCC------CCCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEEE
Confidence 569999999999964 1222 5689999999853 34456799999999999999999993 443222 4699
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.|||+|..+++++||++.+||+.+.
T Consensus 88 ~~V~d~d~~~~d~~lG~~~i~L~~l~ 113 (128)
T cd08388 88 FAVLSFDRYSRDDVIGEVVCPLAGAD 113 (128)
T ss_pred EEEEEcCCCCCCceeEEEEEeccccC
Confidence 99999998888999999999999984
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence |
| >cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group | Back alignment and domain information |
|---|
Probab=99.48 E-value=6e-13 Score=121.19 Aligned_cols=113 Identities=20% Similarity=0.308 Sum_probs=87.4
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|+|+|++|++|+. .+..+.+||||+|.+.+. .....||+++.++.||.|||+|.|.+..+....|.|.|||
T Consensus 2 ~~~V~v~~a~~L~~------~~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKA------DSSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCC------CCCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 58999999999963 234567899999986432 1345799999999999999999999877656789999999
Q ss_pred ccCCCCCCccEEEEEECCccCC---cc---EEEEccCCCCCcccCeEEEEEEEE
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~---Gy---R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
++..+++++||++.++|+.+.. |. +|++|.. . +.|.+++.+
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-~------g~i~l~~~~ 120 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-Q------GRLLLRVSM 120 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-C------CeEEEEEEE
Confidence 9988889999999999987532 32 5778753 3 456555554
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap |
| >cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.3e-14 Score=129.31 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=88.8
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|+|+|++|++|+. .+..+..||||+|.+.+......+.||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~~ 87 (136)
T cd08405 14 ANRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLII 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEEE
Confidence 3569999999999953 234567899999998543233346789999999999999999999864433 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccE-EEEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR-~IpL~d~~g~~l 593 (605)
.|||.+..+++++||++.+++.....+.+ |..|+...++++
T Consensus 88 ~v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 88 TVMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 99999988889999999999998755444 457777766665
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves |
| >cd04011 C2B_Ferlin C2 domain second repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.5e-13 Score=121.40 Aligned_cols=98 Identities=20% Similarity=0.175 Sum_probs=82.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC----ccEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE----LALLR 551 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe----la~Lr 551 (605)
..|+|+|+.|++|+ .+.+||||+|.+.+ .+++|++++++.||.|||+|.|.+..+. -+.|.
T Consensus 4 ~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~ 68 (111)
T cd04011 4 FQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIK 68 (111)
T ss_pred EEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEE
Confidence 46899999999984 24579999999865 4678999999999999999999986553 25799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc------EEEEccCC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI------RAVPLHDR 588 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy------R~IpL~d~ 588 (605)
|.|||++..+++++||++.++|+.+..+. +|+||.|+
T Consensus 69 i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 69 ISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 99999998888999999999999996552 47788764
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme |
| >cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.3e-13 Score=120.23 Aligned_cols=115 Identities=25% Similarity=0.362 Sum_probs=89.9
Q ss_pred eEEEEEEeccccccCCCCCcc--CCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHF--DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~--d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.|+|+|++|++|+.. +... ...+.+||||+|.+.+ ..++|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~~--d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v 74 (121)
T cd08391 2 VLRIHVIEAQDLVAK--DKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIEL 74 (121)
T ss_pred eEEEEEEEccCCccc--ccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEE
Confidence 589999999999631 1000 0124689999999854 578999999999999999999998765567899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
||++.. ++++||++.+++..+..+ -.|++|.+. ..+.|.++++|
T Consensus 75 ~d~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 75 FDEDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred EecCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 999977 789999999999988644 267898764 34567777765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular |
| >cd04032 C2_Perforin C2 domain of Perforin | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.1e-13 Score=124.24 Aligned_cols=93 Identities=29% Similarity=0.375 Sum_probs=78.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEee-ecCCccEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPELALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v-~~pela~Lrf~ 553 (605)
..+|+|+|++|++|+. +..+.+||||+|.+.| .++||++++++.||+|||+|.|.. ..+....|+|.
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 3679999999999952 2346789999999854 378999999999999999999974 34456789999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
|||+|..+++++||++.++|...-.+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999988899999999999966544
|
Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few |
| >cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.7e-13 Score=123.41 Aligned_cols=108 Identities=27% Similarity=0.329 Sum_probs=88.7
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCC----ccEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE----LALLR 551 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pe----la~Lr 551 (605)
+|+|+|++|++|+. .+..+.+||||+|.+.+ ..+++|+++.+ +.||.|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~------~~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKN------VNLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCC------CCcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 48999999999963 23356789999999865 35678998865 699999999999998774 47899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc--------EEEEccCCCCCccc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI--------RAVPLHDRKGERYK 594 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy--------R~IpL~d~~g~~l~ 594 (605)
|.|||++..+.+++||++.+||..+..+. .+.+|.+++|++.+
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~G 121 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQG 121 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcCe
Confidence 99999998777999999999999987554 35799998888754
|
SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such |
| >cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.3e-13 Score=121.05 Aligned_cols=114 Identities=29% Similarity=0.407 Sum_probs=91.2
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|+|+|++|++|+. .+..+..||||+|.+.+ .+.+|+++.++.||.|||+|.|.+..+ ...|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~------~d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~-~~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIA------KDKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNS-SDRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcC------CCCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCC-CCEEEEEEEE
Confidence 58999999999963 23456789999999732 467899999999999999999988654 3579999999
Q ss_pred ccCC-----------CCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEE
Q 007399 557 YDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF 602 (605)
Q Consensus 557 ~D~~-----------~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i 602 (605)
+|.. +.+++||++.+++..+..+- .|.+|....+.....+.|.++|
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 9842 46899999999999886554 5778887666656677888775
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev |
| >cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3 | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.3e-13 Score=120.23 Aligned_cols=117 Identities=18% Similarity=0.262 Sum_probs=88.7
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|+.|.+|+.. . ...+..||||.|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~---~--~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPR---S--GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCC---C--CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 78999999999631 1 1134679999999843 2457899999999999999999998643 36899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
+..+++++||.+.++++.+..| -.|.||.-.....-..+.|.+.+.|
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~ 121 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSEVQGKVHLELRL 121 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCcccEEEEEEEEC
Confidence 9888899999999999999754 3577776432221235777766654
|
RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p |
| >cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-13 Score=124.30 Aligned_cols=96 Identities=26% Similarity=0.470 Sum_probs=79.5
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC--CcceeeccccCCCCCCeeccEEEEeeecC----CccE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSVP----ELAL 549 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~--D~~k~kTkvv~nn~NPvWNEtf~F~v~~p----ela~ 549 (605)
..|+|+|++|++|+. .+..+.+||||+|.+.+... ...++||+++++++||+|||+|.|.+... ....
T Consensus 16 ~~L~V~Vi~A~~L~~------~~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~ 89 (133)
T cd04009 16 QSLRVEILNARNLLP------LDSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL 89 (133)
T ss_pred CEEEEEEEEeeCCCC------cCCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence 469999999999963 23346789999999875332 24578999999999999999999998642 2468
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCccC
Q 007399 550 LRIEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 550 Lrf~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.|.|||++..+++++||++.++|+.|.
T Consensus 90 l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 90 LLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 9999999998888999999999999986
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s |
| >PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.8e-14 Score=118.84 Aligned_cols=81 Identities=31% Similarity=0.506 Sum_probs=68.1
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCCCCCCCC-
Q 007399 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSP- 103 (605)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~~~- 103 (605)
||..||.+|+++ +.||.++|++||+++|++..++.++|.+||.+|+... ....+..||++||++||+|+.|.+++|
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~--~~~~~~~lt~~gF~~fL~S~~N~~~~~~ 78 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDE--RNRQKGQLTLEGFTRFLFSDENSIFDPE 78 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHH--HHHCTTEEEHHHHHHHHHSTTCBSS-HH
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccch--hhcccCCcCHHHHHHHHCCCcCCCCChH
Confidence 799999999986 9999999999999999998889999999999998532 223457899999999999999999987
Q ss_pred CCCcc
Q 007399 104 TPVVH 108 (605)
Q Consensus 104 ~~~v~ 108 (605)
+..||
T Consensus 79 ~~~Vy 83 (83)
T PF09279_consen 79 HLQVY 83 (83)
T ss_dssp HHSS-
T ss_pred hCCcC
Confidence 33443
|
It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B .... |
| >cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.6e-13 Score=122.38 Aligned_cols=101 Identities=22% Similarity=0.232 Sum_probs=80.5
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCC--ccEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pe--la~Lrf 552 (605)
..|.|+|+.|++|+. .+..+..||||++.+.+ ....++||+++++ .||+|||+|.|. +...+ ...|+|
T Consensus 16 ~~L~V~Vi~a~nL~~------~~~~~~~d~yVk~~llp--~~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L~~ 86 (124)
T cd08389 16 RKLTVTVIRAQDIPT------KDRGGASSWQVHLVLLP--SKKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMALRF 86 (124)
T ss_pred CEEEEEEEEecCCCc------hhcCCCCCcEEEEEEcc--CCcceeecccccC-CCCcccCEEEECCCCHHHhccCEEEE
Confidence 469999999999964 22345679999987754 3346789999887 999999999998 55433 357999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---EEEEc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 585 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL 585 (605)
.|+|++..+++++||++.+||+.+..+- .|++|
T Consensus 87 ~V~~~~~~~~~~~lG~~~i~L~~l~~~~~~~~w~~L 122 (124)
T cd08389 87 RLYGVERMRKERLIGEKVVPLSQLNLEGETTVWLTL 122 (124)
T ss_pred EEEECCCcccCceEEEEEEeccccCCCCCceEEEeC
Confidence 9999998888999999999999997652 45555
|
Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle |
| >cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4 | Back alignment and domain information |
|---|
Probab=99.45 E-value=8e-13 Score=120.11 Aligned_cols=115 Identities=18% Similarity=0.224 Sum_probs=88.6
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|+|+.|++|+. .+..+..||||+|.+.+ ....||+++.++.||+|||.|.|.+... ...|.|.|||+
T Consensus 2 l~v~vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPA------KDITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcC------CCCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence 7899999999853 23456789999999854 2346899999999999999999998543 46899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc----cEEEEccCCCCCcccCeEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGERYKSVKLLMHFE 603 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G----yR~IpL~d~~g~~l~~atLlv~i~ 603 (605)
+..++++++|++.+++..+..+ -.|++|....+..-..+.|.+.+.
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLELS 120 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEEE
Confidence 9888899999999999887643 358899653322223456766553
|
Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. |
| >cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-12 Score=121.76 Aligned_cols=115 Identities=23% Similarity=0.413 Sum_probs=88.9
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-C--------Cc
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--------EL 547 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-p--------el 547 (605)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. + +.
T Consensus 2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcC------CCCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 48999999999963 24456789999999854 57789999999999999999997532 1 12
Q ss_pred cEEEEEEEeccCCCCCCccEEEEE-ECCccCC---c---cEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 548 ALLRIEVHEYDMSEKDDFGGQTCL-PVSELKQ---G---IRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 548 a~Lrf~V~D~D~~~~ddflGq~~l-pL~sLr~---G---yR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
..|.|.|||+|..+++++||++.+ |+..++. + -+|.+|.. .|. ..+.|+|.|+++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~-~~~--~~Geil~~~~~~ 132 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYK-GGQ--SAGELLAAFELI 132 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeec-CCC--chhheeEEeEEE
Confidence 568999999998888999999986 6666642 2 37889973 333 356899988874
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme |
| >cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7 | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.7e-13 Score=120.32 Aligned_cols=103 Identities=21% Similarity=0.244 Sum_probs=81.5
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC---CccEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p---ela~Lr 551 (605)
...|.|+|++|++|+. .+..+..||||+|.+.+ .+..+.||++++++.||+|||+|.|.+... ....|.
T Consensus 15 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l~ 86 (125)
T cd08386 15 ESTLTLKILKAVELPA------KDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVLY 86 (125)
T ss_pred CCEEEEEEEEecCCCC------ccCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEEE
Confidence 3569999999999963 23345689999999843 334567999999999999999999975322 235799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 585 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL 585 (605)
|.|||+|..+++++||++.++|+.+..|- +|.+|
T Consensus 87 ~~v~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~l 123 (125)
T cd08386 87 LQVLDYDRFSRNDPIGEVSLPLNKVDLTEEQTFWKDL 123 (125)
T ss_pred EEEEeCCCCcCCcEeeEEEEecccccCCCCcceEEec
Confidence 99999998888999999999999987653 34554
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves |
| >cd04046 C2_Calpain C2 domain present in Calpain proteins | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.6e-12 Score=117.58 Aligned_cols=114 Identities=21% Similarity=0.281 Sum_probs=89.5
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|+|+|++|++|.. .+..+.+||||+|.+.+ .+.||++++++.||+|||.|.|.+..+ -..|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 358999999999853 24457799999998754 467999999999999999999987654 467999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-cEEEEccC----CCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG-IRAVPLHD----RKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G-yR~IpL~d----~~g~~l~~atLlv~i~f 604 (605)
|++... +++||.+.++++.+..+ +++++|.. .+|+ ..++|.+++.+
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~--~~G~i~~~~~~ 121 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGE--VPGTISVKVTS 121 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCC--CCCEEEEEEEE
Confidence 998765 89999999999987544 67889953 3333 34577777654
|
A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic |
| >cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.3e-13 Score=124.83 Aligned_cols=112 Identities=20% Similarity=0.178 Sum_probs=90.7
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC--ccEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe--la~Lrf~ 553 (605)
..|.|+|++|++|+. .+..+..||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+|.
T Consensus 14 ~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~~~ 87 (134)
T cd00276 14 ERLTVVVLKARNLPP------SDGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87 (134)
T ss_pred CEEEEEEEEeeCCCC------ccCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEEEE
Confidence 569999999999963 23346789999999976544445779999999999999999999987654 3689999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCccE-EEEccCCCCCcc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 593 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~GyR-~IpL~d~~g~~l 593 (605)
|||.+..+++++||++.++++....+.. |.+|++..|+++
T Consensus 88 v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 88 VVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 9999987789999999999999444443 558888777765
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin |
| >cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.5e-12 Score=119.96 Aligned_cols=112 Identities=24% Similarity=0.248 Sum_probs=88.0
Q ss_pred ceEEEEEEeccccccCCCCCccC--------CCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFD--------AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL 547 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d--------~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel 547 (605)
+.|+|+|+.|++|... ... ..+..||||+|.+.+ ....+|+++.++.||.|||+|+|.+. +.
T Consensus 4 g~l~V~v~~a~~L~~~----d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~ 73 (132)
T cd04014 4 GTLKIKICEAVDLKPT----DWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NG 73 (132)
T ss_pred eEEEEEEEEecCCCCC----CchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CC
Confidence 4699999999999531 110 124689999999854 23468999888999999999999986 45
Q ss_pred cEEEEEEEeccCCCCCCccEEEEEECCccCC-----ccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 548 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-----GIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 548 a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~-----GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
+.|.|.|+|.+..+.++++|++.++|+.+.. +-.|++|. +.+.|.|++.+
T Consensus 74 ~~l~~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~l~l~~~~ 128 (132)
T cd04014 74 RNLELTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-------PQGKLHVKIEL 128 (132)
T ss_pred CEEEEEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-------CCcEEEEEEEE
Confidence 7899999999887788999999999999876 25688886 24577777765
|
A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that |
| >cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17 | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.1e-13 Score=119.72 Aligned_cols=104 Identities=19% Similarity=0.223 Sum_probs=83.1
Q ss_pred cceEEEEEEeccccccCCCCCccC-CCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d-~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
...|.|+|++|++|+. .+ ..+..||||+|.+.. .+...++|++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~L~V~v~~a~~L~~------~~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l~ 84 (123)
T cd08390 13 EEQLTVSLIKARNLPP------RTKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTLR 84 (123)
T ss_pred CCEEEEEEEEecCCCC------ccCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEEE
Confidence 3569999999999963 12 345689999999853 33456789999999999999999999876543 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 586 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~ 586 (605)
|.|||.+..+++++||++.++|+.+.... .|.||.
T Consensus 85 i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L~ 122 (123)
T cd08390 85 LSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDLE 122 (123)
T ss_pred EEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeCC
Confidence 99999998778999999999999987543 566663
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat |
| >cd04048 C2A_Copine C2 domain first repeat in Copine | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.1e-13 Score=120.09 Aligned_cols=103 Identities=21% Similarity=0.247 Sum_probs=82.3
Q ss_pred EEeccccccCCCCCccCCCCCCCceEEEEEecCC--CCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccC
Q 007399 482 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 559 (605)
Q Consensus 482 Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p--~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~ 559 (605)
.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||+|||+|.|.+..++...|+|.|||+|.
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~ 79 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS 79 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence 478888853 2445678999999998754 23346799999999999999999999877777889999999996
Q ss_pred ----CCCCCccEEEEEECCccCCcc---EEEEccCCCC
Q 007399 560 ----SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG 590 (605)
Q Consensus 560 ----~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g 590 (605)
.+++++||++.++++.|..+- .+.+|.+..+
T Consensus 80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 678999999999999987442 3567755444
|
There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma |
| >cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15 | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.9e-13 Score=123.83 Aligned_cols=98 Identities=24% Similarity=0.304 Sum_probs=79.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+ .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~V~V~~a~nL~~------~~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~~ 86 (137)
T cd08409 14 LNRLTVVVLRARGLRQ------LD-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLSL 86 (137)
T ss_pred CCeEEEEEEEecCCCc------cc-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEEE
Confidence 3569999999999963 23 456899999998764333346789999999999999999999865444 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
.|+|.+..+++++||++.++......|
T Consensus 87 ~V~~~~~~~~~~~lG~v~ig~~~~~~~ 113 (137)
T cd08409 87 SVMQSGGVRKSKLLGRVVLGPFMYARG 113 (137)
T ss_pred EEEeCCCCCCcceEEEEEECCcccCCC
Confidence 999999888899999999997655434
|
Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id |
| >cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4 | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.8e-13 Score=125.93 Aligned_cols=97 Identities=22% Similarity=0.268 Sum_probs=79.6
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC-Cc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-EL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p-el--a~Lr 551 (605)
.+.|.|+|++|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|.
T Consensus 26 ~g~L~V~Vi~A~nL~~------~d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L~ 99 (162)
T cd04020 26 TGELHVWVKEAKNLPA------LKSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACLE 99 (162)
T ss_pred CceEEEEEEeeeCCCC------CCCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEEE
Confidence 4679999999999964 2334678999999986543445678999999999999999999985432 23 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.|||+|..+++++||++.++++.+.
T Consensus 100 i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 100 LTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEeCCCCCCCceEEEEEEeCCccc
Confidence 99999998888999999999999874
|
All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin |
| >cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-12 Score=120.40 Aligned_cols=108 Identities=29% Similarity=0.406 Sum_probs=88.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC-ccEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE-LALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe-la~Lrf~V 554 (605)
..|+|+|++|++|+. .+..+..||||+|.+.+.+.+..++||+++.++.||.|||+|.|.+..++ ...|+|.|
T Consensus 13 ~~l~v~i~~a~nL~~------~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIP------MDPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCC------cCCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 469999999999963 12335689999999987666667889999999999999999999987553 35899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc--cEEEEccCCC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRK 589 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G--yR~IpL~d~~ 589 (605)
||++..+.+++||++.++|+.+..+ -.|.+|.+..
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~ 123 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQE 123 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCcc
Confidence 9999877899999999999998643 3578887643
|
A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd |
| >cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.9e-12 Score=117.13 Aligned_cols=119 Identities=22% Similarity=0.218 Sum_probs=92.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|++|+. . ....+.+||||+|.+.+. ....+|+++.++.||.|||+|.|.+. +....|.|.||
T Consensus 2 g~l~v~v~~a~~L~~----~-~~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKG----S-DIIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCc----c-cccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 358999999999962 1 012245799999998652 35678999999999999999999987 44568999999
Q ss_pred eccCCCCCCccEEEEEECCccCCccE---EEEccCCCCCcccCeEEEEEEEEC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|++..+++++||++.++|..+..+.. +.......|++ .++|-|.++|+
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~--~G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKP--VGELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCcc--ceEEEEEEEeC
Confidence 99988789999999999999875532 22334456665 47888888875
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1) | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.1e-12 Score=120.54 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=88.5
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC--------ccE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--------LAL 549 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe--------la~ 549 (605)
..++|..+.++++. . .+..+..||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~--~--~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLP--S--GWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccC--C--CcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 45566666654321 1 22334579999999743234456889999999999999999999985442 135
Q ss_pred EEEEEEeccCC-CCCCccEEEEEECCccCCc--c-EEEEccCCCCCcccCeEEEEEEEE
Q 007399 550 LRIEVHEYDMS-EKDDFGGQTCLPVSELKQG--I-RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 550 Lrf~V~D~D~~-~~ddflGq~~lpL~sLr~G--y-R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.|.|||++.+ .+|++||++.++|+.+..+ . .+++|++ |...-++.|-|++..
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~ 136 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRL 136 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEe
Confidence 99999999875 4699999999999999544 3 4679986 555567788888754
|
Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha |
| >cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16 | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.2e-13 Score=122.82 Aligned_cols=113 Identities=18% Similarity=0.244 Sum_probs=87.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
..+|.|+|+.|++|+. .+..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~ 87 (138)
T cd08408 14 TGRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLM 87 (138)
T ss_pred CCeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEEE
Confidence 3569999999999963 234467899999998653222 246799999999999999999999876554 5899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc-cE-EEEccCCCCCcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQG-IR-AVPLHDRKGERY 593 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~G-yR-~IpL~d~~g~~l 593 (605)
|.|||.+..+++++||++.+++.....+ .. |-.+++..++++
T Consensus 88 ~~V~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW~~~l~~~~~~v 131 (138)
T cd08408 88 FSVYNKRKMKRKEMIGWFSLGLNSSGEEEEEHWNEMKESKGQQV 131 (138)
T ss_pred EEEEECCCCCCCcEEEEEEECCcCCCchHHHHHHHHHhCCCCEE
Confidence 9999999888899999999999877543 33 335555555543
|
Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle |
| >cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-12 Score=118.08 Aligned_cols=99 Identities=24% Similarity=0.379 Sum_probs=80.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~Lr 551 (605)
...|+|+|++|++|+. .+..+.+||||+|.+.+...+..+.||++++++.||+|||+|.|. +...++ ..|.
T Consensus 14 ~~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l~ 87 (123)
T cd04035 14 NSALHCTIIRAKGLKA------MDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTLR 87 (123)
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEEE
Confidence 3569999999999963 233467899999998765555567899999999999999999996 333333 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
|.|||++.. .+++||++.++++.|.++-
T Consensus 88 ~~v~d~~~~-~~~~iG~~~i~l~~l~~~~ 115 (123)
T cd04035 88 LLVLDEDRF-GNDFLGETRIPLKKLKPNQ 115 (123)
T ss_pred EEEEEcCCc-CCeeEEEEEEEcccCCCCc
Confidence 999999877 6899999999999998663
|
Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain |
| >cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.2e-12 Score=117.85 Aligned_cols=91 Identities=20% Similarity=0.364 Sum_probs=77.4
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|.|++|++|+. .+..+.+||||+|.+.+. ..+.||++++++.||+|||+|.|.+..++.+.|.|.|||+
T Consensus 2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999963 244567899999998542 2345788888999999999999998878778999999999
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007399 558 DMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr 577 (605)
|..+++++||++.++|+...
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999999775
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1) | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.4e-12 Score=116.27 Aligned_cols=116 Identities=22% Similarity=0.285 Sum_probs=86.4
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC--------CcceeeccccCCCCCCee-ccEEEEeeecCCcc
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--------DTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELA 548 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~--------D~~k~kTkvv~nn~NPvW-NEtf~F~v~~pela 548 (605)
++|++++|++|+. +.++.+||||++.+.+... +..++||++++++.||+| ||+|.|.+... .
T Consensus 3 ~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~--~ 73 (137)
T cd08691 3 FSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT--D 73 (137)
T ss_pred EEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--C
Confidence 6899999999842 3457899999999964221 234789999999999999 99999998543 4
Q ss_pred EEEEEEEeccCCCC---CCccEEEEEECCccCCc------cEEEEccCCCCCcccCeEEEEEE
Q 007399 549 LLRIEVHEYDMSEK---DDFGGQTCLPVSELKQG------IRAVPLHDRKGERYKSVKLLMHF 602 (605)
Q Consensus 549 ~Lrf~V~D~D~~~~---ddflGq~~lpL~sLr~G------yR~IpL~d~~g~~l~~atLlv~i 602 (605)
.|.|+|||++..++ +++||++.+||+.|..| ..+.+|.-......-.+.|.++|
T Consensus 74 ~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~~~~~~~~~~~~l~k~~~~s~v~G~~~l~~ 136 (137)
T cd08691 74 VLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLERHAIGDQELSYTLGRRTPTDHVSGQLTFRF 136 (137)
T ss_pred EEEEEEEecCCCCCccCCceEEEEEEEHHHhcccccCCceEEEEECCcCCCCCcEEEEEEEEe
Confidence 79999999875433 69999999999999755 23456654444334445666554
|
NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C |
| >cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP) | Back alignment and domain information |
|---|
Probab=99.36 E-value=3e-12 Score=120.36 Aligned_cols=91 Identities=30% Similarity=0.434 Sum_probs=77.6
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|++|+. .+. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 2 G~L~V~Vi~a~nL~~------~d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAV------RDF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCC------CCC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 358999999999963 123 5679999999843 578999999999999999999999776 567999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
|+|..++++++|++.+++..+..+
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~ 92 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEA 92 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhh
Confidence 999888899999999999987544
|
ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i |
| >cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Probab=99.35 E-value=5e-12 Score=117.67 Aligned_cols=104 Identities=29% Similarity=0.348 Sum_probs=84.9
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC------------
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP------------ 545 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p------------ 545 (605)
|+|+|+.|++|+. . ..+..||||+|.+.+ +....+++|+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~------~-~~g~~dPyv~v~~~~-~~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLAL------K-SNGTCDPFARVTLNY-SSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCc------c-cCCCCCcEEEEEEec-CCcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 5799999999953 1 235689999999864 2334678999999999999999999998765
Q ss_pred ---CccEEEEEEEeccCCCCCCccEEEEEECCccCCc---cEEEEccCCC
Q 007399 546 ---ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRK 589 (605)
Q Consensus 546 ---ela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~ 589 (605)
....|+|.|||.+..++++|||++.++|..+..+ .+|.+|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3457999999999887899999999999998654 5688887654
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin |
| >cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.8e-12 Score=113.84 Aligned_cols=92 Identities=26% Similarity=0.357 Sum_probs=72.2
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|.+|++|. +..||||++++.+......+.||++++++.||+|||+|.|.+.. -..|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 689999999983 24799999988643222457899999999999999999999863 44899999998
Q ss_pred -------cCCCCCCccEEEEEECCc--cC-CccEE
Q 007399 558 -------DMSEKDDFGGQTCLPVSE--LK-QGIRA 582 (605)
Q Consensus 558 -------D~~~~ddflGq~~lpL~s--Lr-~GyR~ 582 (605)
|..+.++++|.+.+.|+. +. .|++-
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~ 102 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQE 102 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeE
Confidence 455779999888888763 43 46653
|
The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr |
| >cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.32 E-value=9e-12 Score=113.29 Aligned_cols=92 Identities=25% Similarity=0.418 Sum_probs=77.5
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|.|+|++|++++. .+..+.+||||+|.+.+ ..+.+|+++.++.||.|||+|.|.+..+. ..|+|.|||
T Consensus 2 ~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~d 70 (120)
T cd04045 2 VLRLHIRKANDLKN------LEGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVMD 70 (120)
T ss_pred eEEEEEEeeECCCC------ccCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEEE
Confidence 58999999999853 23456789999999843 24678999989999999999999887653 579999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~G 579 (605)
++..+++++||++.+++..+..+
T Consensus 71 ~~~~~~d~~IG~~~~~l~~l~~~ 93 (120)
T cd04045 71 YEKVGKDRSLGSVEINVSDLIKK 93 (120)
T ss_pred CCCCCCCCeeeEEEEeHHHhhCC
Confidence 99888899999999999998765
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.4e-12 Score=113.21 Aligned_cols=91 Identities=25% Similarity=0.368 Sum_probs=75.7
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCC---ccEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE---LALLRI 552 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pe---la~Lrf 552 (605)
.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||+|||+|.|.+..+. ...|.|
T Consensus 2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v 70 (124)
T cd04049 2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLIL 70 (124)
T ss_pred eEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEEE
Confidence 58999999999953 23446789999999843 4568888875 799999999999998773 467999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQ 578 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~ 578 (605)
.|||.+..+++++||++.+++..+..
T Consensus 71 ~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 71 RIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEECccCCCCCeEEEEEEEhHHhhh
Confidence 99999988889999999999999853
|
In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai |
| >PLN03008 Phospholipase D delta | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-11 Score=140.12 Aligned_cols=99 Identities=22% Similarity=0.445 Sum_probs=86.4
Q ss_pred CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007399 501 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 501 s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
..+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. +.|.|+|+|+|.++ +++||++.|||..|.+|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4579999999943 34569999999999999999999998764 58999999999887 699999999999999996
Q ss_pred ---EEEEccCCCCCccc-CeEEEEEEEEC
Q 007399 581 ---RAVPLHDRKGERYK-SVKLLMHFEFI 605 (605)
Q Consensus 581 ---R~IpL~d~~g~~l~-~atLlv~i~f~ 605 (605)
+|++|.+..|+++. ++.|.|.++|+
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~ 177 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFT 177 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEE
Confidence 68999999999984 47999999884
|
|
| >cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=112.50 Aligned_cols=93 Identities=22% Similarity=0.285 Sum_probs=75.1
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|.|+|+.|++++. . +..||||+|.+.+ .+.+|++++++ ||.|||+|.|.+..++.. |.|.|||
T Consensus 3 ~L~V~Vv~Ar~L~~------~---~~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~d 66 (127)
T cd08394 3 LLCVLVKKAKLDGA------P---DKFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELWN 66 (127)
T ss_pred eEEEEEEEeeCCCC------C---CCCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEEe
Confidence 59999999999842 1 2348999999843 57789988775 999999999999765544 9999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc-----cEEEEcc
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQG-----IRAVPLH 586 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~G-----yR~IpL~ 586 (605)
+|.. .||++|++.+||+.+..+ -.|+||.
T Consensus 67 kd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 67 KGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred CCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 9965 699999999999998643 3567774
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi |
| >cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.1e-11 Score=113.50 Aligned_cols=115 Identities=17% Similarity=0.313 Sum_probs=92.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
...|.|.|+.|++|+. ..+|||+|.+.| ....||+++.++.||.|+|+|.|....+ ...|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~-----------~~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPP-----------KKRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCC-----------cCCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 3569999999999963 126899999976 3345999999999999999999975443 56689999
Q ss_pred EeccC-CC---CCCccEEEEEECCccCCcc---EEEEccCCCCCc--------ccCeEEEEEEEEC
Q 007399 555 HEYDM-SE---KDDFGGQTCLPVSELKQGI---RAVPLHDRKGER--------YKSVKLLMHFEFI 605 (605)
Q Consensus 555 ~D~D~-~~---~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~--------l~~atLlv~i~f~ 605 (605)
+..+. .+ ++++||.+.||+..+..|. +|.||.+.+|.+ -++++|-|+++|.
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf~ 139 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARYQ 139 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEEE
Confidence 65442 21 4789999999999998874 799999999997 4668999999873
|
SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas |
| >cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.9e-11 Score=115.92 Aligned_cols=102 Identities=28% Similarity=0.403 Sum_probs=79.2
Q ss_pred CcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC------------------------CcceeeccccCCC
Q 007399 474 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA------------------------DTVMKKTKTLEDN 529 (605)
Q Consensus 474 ~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~------------------------D~~k~kTkvv~nn 529 (605)
....|+|+|++|++|+. .+..+.+||||+|.+.+... ....++|+++.++
T Consensus 26 ~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~t 99 (153)
T cd08676 26 PIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQT 99 (153)
T ss_pred CeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCC
Confidence 34679999999999853 34456789999998853211 0124689999999
Q ss_pred CCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC-Ccc-EEEEc
Q 007399 530 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK-QGI-RAVPL 585 (605)
Q Consensus 530 ~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr-~Gy-R~IpL 585 (605)
.||.|||+|.|.+..+....|.|.|||++ +++||++.++++.+. .|. .|.+|
T Consensus 100 lnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~~~~~d~W~~L 153 (153)
T cd08676 100 LNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLPSCGLDSWFKL 153 (153)
T ss_pred CCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhCCCCCCCeEeC
Confidence 99999999999997655678999999987 789999999999987 332 34454
|
C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy |
| >cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.1e-11 Score=110.48 Aligned_cols=115 Identities=22% Similarity=0.279 Sum_probs=86.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
.+|.|+|++|+.+. .+..+.+||||+|.+.+. .+.+|+++.++.||+|||+|.|.+. +...|.|.||
T Consensus 2 ~~L~V~i~~a~l~~-------~~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~ 68 (125)
T cd04021 2 SQLQITVESAKLKS-------NSKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVW 68 (125)
T ss_pred ceEEEEEEeeECCC-------CCcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEE
Confidence 35899999998332 122467899999998542 3678999999999999999999874 3468999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-------c-EEEEccCCCC-CcccCeEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG-------I-RAVPLHDRKG-ERYKSVKLLMHFE 603 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G-------y-R~IpL~d~~g-~~l~~atLlv~i~ 603 (605)
|++..+.+++||++.++|+.+..+ + -+++|..+.. .....+.|.+.++
T Consensus 69 d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 125 (125)
T cd04021 69 SHHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVILD 125 (125)
T ss_pred eCCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEeC
Confidence 999888899999999999988632 2 2577764441 2233457776653
|
E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e |
| >PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-11 Score=102.27 Aligned_cols=85 Identities=38% Similarity=0.536 Sum_probs=73.4
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+..+.++|||+|.+.+.+. .+++|+++.++.+|.|||+|.|.+..++.+.|.|.|||.
T Consensus 1 L~v~I~~a~~L~~------~~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPS------KDSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSS------SSTTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCC------cccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 7899999999964 12345689999999987543 568999999999999999999999888888899999999
Q ss_pred cCCCCCCccEEEE
Q 007399 558 DMSEKDDFGGQTC 570 (605)
Q Consensus 558 D~~~~ddflGq~~ 570 (605)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999974
|
C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A .... |
| >cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.4e-11 Score=106.09 Aligned_cols=113 Identities=21% Similarity=0.304 Sum_probs=84.0
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEEEE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 555 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~ 555 (605)
|+|+|+.|.+|+. . +.+||||.|.+.+ ...++|+++.+ .||.|||+|.|.+...++ ..|.|.|+
T Consensus 2 L~v~vi~a~~l~~----~-----~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPS----K-----GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCc----C-----CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 7899999999953 1 4579999999854 23568999988 999999999999876554 45777888
Q ss_pred eccCCCCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.+...++.++|.+.+.......+. .|.+|....+.....+.|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8776555666776555554444443 478998776655556788888765
|
RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.6e-12 Score=133.34 Aligned_cols=96 Identities=30% Similarity=0.494 Sum_probs=85.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 554 (605)
..|+|+|..|.+|.. .|.++.+||||++.+...+....|+||++++.++||+|||+|+|.+...+. ..|.+.|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 458999999999842 456688999999999988888889999999999999999999999976554 5799999
Q ss_pred EeccCCCCCCccEEEEEECCccC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr 577 (605)
||+|..+++||+|...+.+++|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999998875
|
|
| >cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.8e-11 Score=106.81 Aligned_cols=97 Identities=18% Similarity=0.252 Sum_probs=78.8
Q ss_pred CCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC
Q 007399 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 498 d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
...+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+..+....|.|.|+|++.. ++++||.+.+||+.+.
T Consensus 8 ~~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~ 82 (111)
T cd04052 8 SKTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLI 82 (111)
T ss_pred ccCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHH
Confidence 4456789999999854 2457899988899999999999998766557799999999987 7999999999999873
Q ss_pred -C---ccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 578 -Q---GIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 578 -~---GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
. +.+|.+|.+ .+.+.|.++++|
T Consensus 83 ~~~~~~~~w~~L~~-----~~~G~i~~~~~~ 108 (111)
T cd04052 83 DATSVGQQWFPLSG-----NGQGRIRISALW 108 (111)
T ss_pred hhhhccceeEECCC-----CCCCEEEEEEEE
Confidence 2 357889875 235788888877
|
5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. |
| >cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.7e-11 Score=115.90 Aligned_cols=98 Identities=27% Similarity=0.411 Sum_probs=84.6
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc------ccchHHHHHHHHhhhhhccC
Q 007399 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------APVELIKCLRSIKEYAFVAS 195 (605)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt------s~i~f~dvi~aI~~~AF~~S 195 (605)
.+|+-|-...+ +.|..+|..||..|||.||+|||...| +.|+|.|+.++. .-.+|.||++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888866555 889999999999999999999999876 479999999986 56889999999999999 88
Q ss_pred CCceEEEeccCCCH----HHHHHHHHHHHHHhh
Q 007399 196 EYPVVITLEDHLTP----DLQAKVAEMVTQTLG 224 (605)
Q Consensus 196 ~yPvIlSlE~Hc~~----~qQ~~ma~~~~~i~G 224 (605)
.+|++|.||.+++. .++..+++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999874 666777777776654
|
The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph |
| >cd04047 C2B_Copine C2 domain second repeat in Copine | Back alignment and domain information |
|---|
Probab=99.20 E-value=8e-11 Score=104.71 Aligned_cols=93 Identities=22% Similarity=0.340 Sum_probs=72.3
Q ss_pred EEEEeccccccCCCCCccCCCCCCCceEEEEEecCC-CCcceeeccccCCCCCCeeccEEEEeee---cCC-ccEEEEEE
Q 007399 480 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-ADTVMKKTKTLEDNWIPSWNEEFEFPLS---VPE-LALLRIEV 554 (605)
Q Consensus 480 V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p-~D~~k~kTkvv~nn~NPvWNEtf~F~v~---~pe-la~Lrf~V 554 (605)
+-.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||+|| +|.|.+. ..+ ...|+|.|
T Consensus 4 ~~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V 76 (110)
T cd04047 4 ELQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEV 76 (110)
T ss_pred EEEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEE
Confidence 34568888853 3445678999999986532 12346799999999999999 7777643 222 46899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
||++..+++++||++.++++.|.++
T Consensus 77 ~d~d~~~~d~~iG~~~~~l~~l~~~ 101 (110)
T cd04047 77 YDYDSSGKHDLIGEFETTLDELLKS 101 (110)
T ss_pred EEeCCCCCCcEEEEEEEEHHHHhcC
Confidence 9999988899999999999999855
|
There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom |
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.7e-10 Score=126.24 Aligned_cols=121 Identities=23% Similarity=0.292 Sum_probs=93.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 553 (605)
..|+|+|+.|.+|+.. +..+..||||++.+.. ....+.+|+++++++||+|||+|.|.|...++ ..|.|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 4599999999999741 2234689999999864 44678899999999999999999999876655 589999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---EEEEccCCCCCcccC-eEEEEEEEE
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEF 604 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l~~-atLlv~i~f 604 (605)
|||+|.++++++||++.+||..+.... .|.+|....-..-.. +-|++.+.+
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y 293 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCY 293 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEe
Confidence 999999999999999999999887655 466665432222111 466665544
|
|
| >smart00239 C2 Protein kinase C conserved region 2 (CalB) | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.4e-10 Score=95.57 Aligned_cols=99 Identities=38% Similarity=0.543 Sum_probs=81.3
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|+|+.|+++.. .......+|||++.+.+.. ....+|+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 l~i~i~~~~~l~~------~~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPK------KDKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCC------CCCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 7899999999853 1222457999999997532 3467899998889999999999998776567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCccEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQGIRAVP 584 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~GyR~Ip 584 (605)
+..+.+.++|.+.+|+..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 877678999999999999999987654
|
Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles. |
| >PLN03200 cellulose synthase-interactive protein; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.8e-10 Score=136.61 Aligned_cols=114 Identities=16% Similarity=0.314 Sum_probs=92.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~ 553 (605)
.+.|+|+|++|+++. +.++.+||||.|.+.. ..++||+++++|.||+|||+|+|.+..|.. ..|.|.
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 477999999999984 2245689999999853 236689999999999999999999987764 469999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCccE---EEEccC---CCCCcccCeEEEEEEEE
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHD---RKGERYKSVKLLMHFEF 604 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d---~~g~~l~~atLlv~i~f 604 (605)
|||+|.++ ++.+|.+.+++..+-.+-+ +.+|.+ ++|++ -+|-++|+|
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w 2099 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQW 2099 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEe
Confidence 99999886 5589999999999875533 678885 45553 378899987
|
|
| >cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-09 Score=98.92 Aligned_cols=97 Identities=24% Similarity=0.273 Sum_probs=78.6
Q ss_pred EEEEEEeccccccCCCCCccCCCC--CCCceEEEEEecCCCCcceeeccccCCCCC--CeeccEEEEeeec---------
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYS--PPDFYARVGIAGVPADTVMKKTKTLEDNWI--PSWNEEFEFPLSV--------- 544 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s--~~DPyV~V~i~G~p~D~~k~kTkvv~nn~N--PvWNEtf~F~v~~--------- 544 (605)
|+|.|..+++++.. . .+..+ .+||||++.+.|. ...+++|.++.+++| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~--~--~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~ 75 (133)
T cd08374 2 LRVIVWNTRDVLND--D--TNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVV 75 (133)
T ss_pred EEEEEEECcCCccc--c--cccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEE
Confidence 78999999997542 1 11123 4899999999874 456789999999988 9999999998765
Q ss_pred ------------CCc--cEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007399 545 ------------PEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 545 ------------pel--a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
.++ ..|.++|||.|..+++++||+..++|..|.+|.
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 76 IKKEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred EeeccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 222 579999999999999999999999999987764
|
Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.8e-09 Score=118.08 Aligned_cols=116 Identities=25% Similarity=0.390 Sum_probs=88.7
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
.+++++|++||+|.. .|.-+.+||||.+.+. ..|+||++|..++||+|||.|+|.+.+. -..|+++||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechns-tdrikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCC-CceeEEEEe
Confidence 458999999999964 2445778999999975 3688999999999999999999999865 356899999
Q ss_pred eccCC-----------CCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEEE
Q 007399 556 EYDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFE 603 (605)
Q Consensus 556 D~D~~-----------~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i~ 603 (605)
|+|.. ..+||+||..|.+..|.-.. -|..|--...+..-.+-+-+||.
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsgemdvwynlekrtdksavsgairlhis 422 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHIS 422 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccchhhhcchhhccchhhccceEEEEEE
Confidence 98864 35899999999998885332 35566555555554445555553
|
|
| >cd00030 C2 C2 domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-08 Score=86.38 Aligned_cols=90 Identities=39% Similarity=0.570 Sum_probs=74.3
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|.|++|++++.. ......+|||.+.+.+ ....+|+++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 47899999988531 2235689999999865 3567899998889999999999998764556799999998
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007399 558 DMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr 577 (605)
+..+...++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87766899999999999986
|
The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. |
| >PLN02270 phospholipase D alpha | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-08 Score=117.27 Aligned_cols=125 Identities=18% Similarity=0.271 Sum_probs=99.5
Q ss_pred cceEEEEEEeccccccC-C-----------CCCccCCCCCCCceEEEEEecCCCCcceeeccccCCC-CCCeeccEEEEe
Q 007399 475 KKTLKVTVYMGEGWYYD-F-----------PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFP 541 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~-~-----------~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn-~NPvWNEtf~F~ 541 (605)
.++|.|+|+.|.+|+.. . ..+-......+||||.|.+.+ ..-.||+++.|. .||+|||+|...
T Consensus 7 hg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~ 82 (808)
T PLN02270 7 HGTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIY 82 (808)
T ss_pred ecceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEe
Confidence 35699999999988631 0 000001113569999999976 345699999886 699999999998
Q ss_pred eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCCCCCcc-cCeEEEEEEEEC
Q 007399 542 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERY-KSVKLLMHFEFI 605 (605)
Q Consensus 542 v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l-~~atLlv~i~f~ 605 (605)
+..+ .+-|.|+|+|.|..+ ..+||.+.+|+..|-.|- +|+|+.+.+|+++ +++.|-|+++|+
T Consensus 83 ~ah~-~~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~ 148 (808)
T PLN02270 83 CAHM-ASNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYF 148 (808)
T ss_pred eccC-cceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEE
Confidence 8766 478999999999887 679999999999999884 7899999999999 458999999985
|
|
| >cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.8e-09 Score=107.87 Aligned_cols=137 Identities=15% Similarity=0.245 Sum_probs=108.6
Q ss_pred CCcccceeeeccCcccccCCC--CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhh
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQ--LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKE 189 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Q--l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~ 189 (605)
+.||++.-|-.|||++-...- -.+.+....+..-|..|+|.++|+|+..+ +++..++||..... .+|.||++.|++
T Consensus 7 ~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~~ 84 (279)
T cd08586 7 DTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECYS 84 (279)
T ss_pred CCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHHH
Confidence 779999999999998754332 44566677788999999999999999865 24689999976555 899999999999
Q ss_pred hhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecC
Q 007399 190 YAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTK 253 (605)
Q Consensus 190 ~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K 253 (605)
+--..-.-.|||+|..+++... -.+-+.++|.+.+..+... ....+|+..++||||++-..
T Consensus 85 FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 85 FLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 8877777889999999998764 3334566666666655432 24789999999999999854
|
This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which |
| >KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.3e-09 Score=112.63 Aligned_cols=150 Identities=20% Similarity=0.219 Sum_probs=104.0
Q ss_pred ccccccCCceeeeecCCcccCCCCCCCccC---C------C-C-C-------CCCcceEEEEEEeccccccCCCCCccCC
Q 007399 438 HGMFRANGGCGYVKKPNFLLQTGPHNEVFD---P------K-V-K-------LPAKKTLKVTVYMGEGWYYDFPHTHFDA 499 (605)
Q Consensus 438 ~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~---p------~-~-~-------~p~~~~L~V~Visaq~L~~~~~~~~~d~ 499 (605)
..+|..|+--|.|.=|-...+........- | . . . +|....|+|.|+.|++|.. .+.
T Consensus 242 ~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y~p~~g~ltv~v~kar~L~~------~~~ 315 (421)
T KOG1028|consen 242 FDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCYLPTAGRLTVVVIKARNLKS------MDV 315 (421)
T ss_pred cCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEeecCCCeEEEEEEEecCCCc------ccC
Confidence 478999988899888722222111000000 0 0 0 1 2445789999999999953 344
Q ss_pred CCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEEEEeccCCCCCCccEEEEEECCccC
Q 007399 500 YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 500 ~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
.+..||||++.+........|+||.+.+++.||+|||+|.|.|....+ +.|.++|||+|..+++++||++.+...+-.
T Consensus 316 ~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~vp~~~l~~~~l~l~V~d~d~~~~~~~iG~~~lG~~~~~ 395 (421)
T KOG1028|consen 316 GGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFDVPPEQLAEVSLELTVWDHDTLGSNDLIGRCILGSDSTG 395 (421)
T ss_pred CCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEeCCHHHhheeEEEEEEEEcccccccceeeEEEecCCCCc
Confidence 567899999998754444567789999999999999999998875554 569999999999999999999888877633
Q ss_pred CccEEE-EccCCCCCcc
Q 007399 578 QGIRAV-PLHDRKGERY 593 (605)
Q Consensus 578 ~GyR~I-pL~d~~g~~l 593 (605)
.|-+|+ .+.+.-++++
T Consensus 396 ~~~~hW~~m~~~p~~pv 412 (421)
T KOG1028|consen 396 EEVRHWQEMLNSPRKPV 412 (421)
T ss_pred hHHHHHHHHHhCccCce
Confidence 333433 4444444443
|
|
| >cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.4e-08 Score=105.03 Aligned_cols=137 Identities=18% Similarity=0.283 Sum_probs=104.1
Q ss_pred CCCcccceeeeccCcccccCCCC--CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc-cchHHHHHHHH
Q 007399 111 MTAPVSHYFIYTGHNSYLTGNQL--NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA-PVELIKCLRSI 187 (605)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~g~Ql--~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts-~i~f~dvi~aI 187 (605)
-++||++|.+-.+||+|..+..- .+...-......|..|.|-++||++... +...++||.-... ..+|.|+++.|
T Consensus 8 ~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~i 85 (270)
T cd08588 8 CDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLREV 85 (270)
T ss_pred CCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHHH
Confidence 47899999999999999987653 3344444568889999999999999853 3588999865443 78999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHH-HHhhccccCCCCCC--CCCCCChhhcc--CcEEE
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT-QTLGEILFTPGSEC--LKEFPSPESLK--RRIII 250 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~-~i~Gd~L~~~~~~~--~~~lPSP~~Lk--~KIli 250 (605)
+++.=..-.=-|||.||++.+.... ..+.+++ ..||+.+|.|+... ...+|++++|. ||-||
T Consensus 86 ~~fL~~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlv 152 (270)
T cd08588 86 VDFLDANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLL 152 (270)
T ss_pred HHHHHhCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEE
Confidence 9987433333389999999987664 3444443 68999999886543 46899999998 55444
|
This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). |
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.5e-08 Score=115.15 Aligned_cols=105 Identities=26% Similarity=0.398 Sum_probs=90.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.+.|+|.+++|++|+. .+..+-.||||++.+-+ +.-++|++++.++||+|||++...|.+.....+.+.|
T Consensus 1039 sG~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v 1108 (1227)
T COG5038 1039 SGYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINV 1108 (1227)
T ss_pred cCcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEE
Confidence 3569999999999964 46667789999999865 3468999999999999999999999888778899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCccE---EEEccCCC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRK 589 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d~~ 589 (605)
+|+|...+++.||++.++|..|.+|.. .|||-.+.
T Consensus 1109 ~Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1109 NDWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred eecccCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 999999999999999999999998853 47776554
|
|
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.2e-07 Score=105.51 Aligned_cols=95 Identities=24% Similarity=0.379 Sum_probs=77.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC--CcceeeccccCCCCCCeeccEEEEeeec----CCccE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSV----PELAL 549 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~--D~~k~kTkvv~nn~NPvWNEtf~F~v~~----pela~ 549 (605)
.+|.|.|+-|.++.. .|.++.+||||.|++..... -...+||+++..++||+|+|+|+|.|.. .+.|+
T Consensus 947 q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen 947 QTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred cchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence 557888888887742 46678899999999864211 1235689999999999999999999863 34689
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCcc
Q 007399 550 LRIEVHEYDMSEKDDFGGQTCLPVSEL 576 (605)
Q Consensus 550 Lrf~V~D~D~~~~ddflGq~~lpL~sL 576 (605)
|.|+|.|+|..+.+||.|++.+.|+.+
T Consensus 1021 ~~FTVMDHD~L~sNDFaGEA~L~Lg~v 1047 (1103)
T KOG1328|consen 1021 LHFTVMDHDYLRSNDFAGEAFLELGDV 1047 (1103)
T ss_pred EEEEeeccceecccccchHHHHhhCCC
Confidence 999999999999999999999988877
|
|
| >PLN02352 phospholipase D epsilon | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.9e-06 Score=97.59 Aligned_cols=117 Identities=19% Similarity=0.275 Sum_probs=88.4
Q ss_pred cceEEEEEEeccccccCCCC-CccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPH-THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~-~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
.++|.++|..|.-+...+.. .... ...||||.|.+.+ ..-.|| .|.-||+|||+|...+..+-.+.|.|+
T Consensus 9 hg~l~~~i~~~~~~~~~~~~~~~~~--~~~~~y~tv~~~~----~~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~ 79 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPFNCIFL--NGKATYVTIKIGN----KKVAKT---SHEYDRVWNQTFQILCAHPLDSTITIT 79 (758)
T ss_pred ccceEEEEEEeeehhhccccccccc--CCCCceEEEEeCC----cEEecC---CCCCCCccccceeEEeeeecCCcEEEE
Confidence 46799999998733211110 0011 1239999999865 234467 455799999999998877644679999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc----EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGI----RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~Gy----R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|+|. ..+||.+.+|+..|-.|- +|+|+.+.+|+++.++.|-|+++|+
T Consensus 80 vk~~-----~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 130 (758)
T PLN02352 80 LKTK-----CSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFR 130 (758)
T ss_pred EecC-----CeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEE
Confidence 9982 679999999999998883 6899999999999889999999984
|
|
| >cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae | Back alignment and domain information |
|---|
Probab=97.96 E-value=2e-05 Score=69.74 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=62.5
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|.+++++... ......+.+||||.|.+.+ ..+.||++. -||.|||+|.|.|. ...-+.+.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccCC---CCCcccceEEEEec--CCcEEEEEEEeC
Confidence 67899999988421 1011346689999999854 457888874 78999999999994 345789999998
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007399 558 DMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr 577 (605)
.. ...-.+|..-++++.|-
T Consensus 69 ~~-~~~~Pi~llW~~~sdi~ 87 (109)
T cd08689 69 GG-DQPVPVGLLWLRLSDIA 87 (109)
T ss_pred CC-CeecceeeehhhHHHHH
Confidence 63 23456777777776653
|
This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that |
| >COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.8e-05 Score=93.10 Aligned_cols=93 Identities=23% Similarity=0.317 Sum_probs=73.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|.|+|.+|.++.. ...-..+.+|||+.+...+ ...-||++++|.+||+|||+|...+..- -.-|.+.||
T Consensus 436 GVv~vkI~sa~~lk~----~d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~-~d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKK----SDSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSF-TDPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCccc----ccccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEeccc-CCceeEEEE
Confidence 458899999998842 2222456789999999754 3445899999999999999998776521 135899999
Q ss_pred eccCCCCCCccEEEEEECCccC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.+....++++|...++|..|.
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred eccccCCcceeeeEEechHHhh
Confidence 9887788999999999998875
|
|
| >KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.7e-05 Score=86.12 Aligned_cols=104 Identities=27% Similarity=0.374 Sum_probs=82.8
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC--cceeeccccCCCCCCeeccEEEEeee---cCCccEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLS---VPELALL 550 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D--~~k~kTkvv~nn~NPvWNEtf~F~v~---~pela~L 550 (605)
.+++|+|+.|.+|.+. ..+.-.|||+|.+.|.... ..|+.|++..||..|.|||+|+|-+. .|+.--|
T Consensus 1125 hkvtvkvvaandlkwq-------tsgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKWQ-------TSGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred ceEEEEEEecccccch-------hccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence 5689999999988652 1244567999999986533 23557888889999999999999876 3666789
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccC-Ccc--EEEEcc
Q 007399 551 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGI--RAVPLH 586 (605)
Q Consensus 551 rf~V~D~D~~~~ddflGq~~lpL~sLr-~Gy--R~IpL~ 586 (605)
.|+|+|+.....|..+|.+.++|.++. .|- -|+||-
T Consensus 1198 ~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pLg 1236 (1283)
T KOG1011|consen 1198 QFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPLG 1236 (1283)
T ss_pred EEeehhheeecccceeeeeeeehhhHhhcCceeEeeecc
Confidence 999999998777889999999999984 453 578883
|
|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.81 E-value=6.8e-05 Score=84.23 Aligned_cols=108 Identities=23% Similarity=0.330 Sum_probs=83.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|.|+|..|++|+. .+..+..|||+.|.+- ++...||.+|..++-|.|.|+|.|.+.. ....|.|-||
T Consensus 5 ~sl~vki~E~knL~~------~~~~g~~D~yC~v~lD----~E~v~RT~tv~ksL~PF~gEe~~~~iP~-~F~~l~fYv~ 73 (800)
T KOG2059|consen 5 QSLKVKIGEAKNLPS------YGPSGMRDCYCTVNLD----QEEVCRTATVEKSLCPFFGEEFYFEIPR-TFRYLSFYVW 73 (800)
T ss_pred cceeEEEeecccCCC------CCCCCCcCcceEEeec----chhhhhhhhhhhhcCCccccceEEecCc-ceeeEEEEEe
Confidence 458999999999974 2444668999999874 3556789999999999999999998853 3567899999
Q ss_pred eccCCCCCCccEEEEEECCccC--CccE-EEEc--cCCCCCcccC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELK--QGIR-AVPL--HDRKGERYKS 595 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr--~GyR-~IpL--~d~~g~~l~~ 595 (605)
|.| .++|+.||.++|.-..|. +|.- |..| .|++.+.-+.
T Consensus 74 D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEVQG~ 117 (800)
T KOG2059|consen 74 DRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEVQGK 117 (800)
T ss_pred ccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhhcee
Confidence 999 788999999999877663 4543 3344 4666655433
|
|
| >KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.77 E-value=8.1e-05 Score=81.57 Aligned_cols=120 Identities=18% Similarity=0.277 Sum_probs=92.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeecc-EEEEeeecCCc--cEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE-EFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNE-tf~F~v~~pel--a~Lrf 552 (605)
++|.|+|..|+.||.- .. .....|.||+|.+.. ..+||.+..+++||.||. =|.|.|...++ .-|.+
T Consensus 3 gkl~vki~a~r~lpvm--dk---asd~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVM--DK---ASDLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCccc--cc---ccccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 4589999999999741 11 123468899999864 577899999999999995 59999987776 46999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC----------Cc---cEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELK----------QG---IRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr----------~G---yR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
++.|+|..+.+|-||.+.|.++-|. .| --|+|++|.--...+.-.+.|++++|
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlf 138 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLF 138 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeeh
Confidence 9999999999999999999988763 23 24789988544444446788888764
|
|
| >KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.64 E-value=4.2e-05 Score=89.58 Aligned_cols=97 Identities=22% Similarity=0.298 Sum_probs=79.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~Lr 551 (605)
..+|+|-|.-+++|++ ......+||||+.++...|....|+||++++++.||.|||.+.+. +....+ ..|.
T Consensus 1523 ~~~LtImV~H~K~L~~------Lqdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ 1596 (1639)
T KOG0905|consen 1523 NGTLTIMVMHAKGLAL------LQDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQ 1596 (1639)
T ss_pred CceEEEEhhhhccccc------ccCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheee
Confidence 3568888888888854 112345899999999988888889999999999999999999987 322222 5789
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
+.||..+....+.|+|.+++||..+.
T Consensus 1597 ~sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1597 VSVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeeecccceeeeeeeeeeecchhhcc
Confidence 99999998888999999999999864
|
|
| >cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00043 Score=72.06 Aligned_cols=135 Identities=20% Similarity=0.306 Sum_probs=95.9
Q ss_pred CCcccceeeeccCcccccCCCCC---------CCCChHHHHHHHhCCccEEEEEeecCC-CCCCceEeeCCcccccchHH
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQLN---------SDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELI 181 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~---------g~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~ 181 (605)
+.||++=+|--|||+.--+-... +..--.....-|..|.|-+.|.|.-.+ ++++-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 46999999999999875443221 122222346778999999999996433 2245688888543 28999
Q ss_pred HHHHHHhhhhhccCCCceEEEeccCCC------HHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc--cCcEEEe
Q 007399 182 KCLRSIKEYAFVASEYPVVITLEDHLT------PDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL--KRRIIIS 251 (605)
Q Consensus 182 dvi~aI~~~AF~~S~yPvIlSlE~Hc~------~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~L--k~KIlik 251 (605)
+|++.|+++.=.. .=-|||.+ .|.. +++-..+.++|.+.||+.|+.|.. .....|+.++| +||.+|-
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv 158 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVII 158 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEE
Confidence 9999999986455 66688877 4443 577788999999999999998753 23456899996 5555444
|
This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI |
| >cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00079 Score=70.40 Aligned_cols=135 Identities=16% Similarity=0.219 Sum_probs=95.1
Q ss_pred CCcccceeeeccCcccccCCCCCC---------------------CCChHHHHHHHhCCccEEEEEeecCC-CCCCceEe
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQLNS---------------------DCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVL 169 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g---------------------~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~ 169 (605)
+.||.+..|--|||+.--+-.-.+ ..--.....=|..|+|-++|++.-.+ .++.-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 579999999999998643322211 11112245667899999999995432 12456788
Q ss_pred eCCcccccchHHHHHHHHhhhhhccCCCceEEEeccC-----CCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc
Q 007399 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH-----LTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL 244 (605)
Q Consensus 170 HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~H-----c~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~L 244 (605)
||.-- -.+|.+|++.|+++.=....=-|||.++.. ++.++-..+.+.|+++||+.++.+ .....-|+.++|
T Consensus 86 H~~~~--~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~tL~~l 161 (288)
T cd08587 86 HGLYS--GEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR--DSDLLDVTLADL 161 (288)
T ss_pred eeccc--ccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC--ccccCCCcHHHH
Confidence 88322 288999999999976555455688888643 345788888899999999999976 223456789999
Q ss_pred c--CcEEE
Q 007399 245 K--RRIII 250 (605)
Q Consensus 245 k--~KIli 250 (605)
. ||-+|
T Consensus 162 ~~~gk~vi 169 (288)
T cd08587 162 WESGKRVI 169 (288)
T ss_pred HhCCCeEE
Confidence 8 77444
|
This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be |
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00021 Score=74.40 Aligned_cols=105 Identities=24% Similarity=0.307 Sum_probs=77.8
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCcc--EEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela--~Lrf~ 553 (605)
..|.|+++.+..+. .+|.++-.||||.+.+...-....++||.+.+++.||+||+.|.|.+..-+|| -+.+.
T Consensus 233 ~~l~vt~iRc~~l~------ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~ls 306 (362)
T KOG1013|consen 233 PGLIVTIIRCSHLA------SSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALS 306 (362)
T ss_pred CceEEEEEEeeeee------ccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEe
Confidence 34788888876552 35677889999998876322234467899999999999999999999888886 57889
Q ss_pred EEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 592 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~ 592 (605)
|||++....++++|-... -+||.-++++..|.+
T Consensus 307 vgd~~~G~s~d~~GG~~~------g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 307 VGDYDIGKSNDSIGGSML------GGYRRGEVHKHWGRC 339 (362)
T ss_pred ecccCCCcCccCCCcccc------cccccchhhcCcccc
Confidence 999998767888885332 345555666665554
|
|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00071 Score=76.33 Aligned_cols=76 Identities=26% Similarity=0.417 Sum_probs=62.4
Q ss_pred CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC---------------CccEEEEEEEe-ccCCCCCC
Q 007399 501 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELALLRIEVHE-YDMSEKDD 564 (605)
Q Consensus 501 s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p---------------ela~Lrf~V~D-~D~~~~dd 564 (605)
+..|||++|...|.-... .++|++++.+-||.|||.|.|.+..+ +...|++.+|+ .+....++
T Consensus 149 ~~~dp~~~v~~~g~~~~~-~~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~ 227 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKLK-EKKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV 227 (800)
T ss_pred CCCCcceEEeecccchhh-ccccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence 348999999988743322 36899999999999999999998766 56678899998 55666699
Q ss_pred ccEEEEEECCccC
Q 007399 565 FGGQTCLPVSELK 577 (605)
Q Consensus 565 flGq~~lpL~sLr 577 (605)
|+|+..+|+..++
T Consensus 228 FlGevrv~v~~~~ 240 (800)
T KOG2059|consen 228 FLGEVRVPVDVLR 240 (800)
T ss_pred hceeEEeehhhhh
Confidence 9999999999987
|
|
| >cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0017 Score=59.49 Aligned_cols=77 Identities=25% Similarity=0.478 Sum_probs=57.2
Q ss_pred CCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec---------------CCccEEEEEEEeccCCC------
Q 007399 503 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---------------PELALLRIEVHEYDMSE------ 561 (605)
Q Consensus 503 ~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~---------------pela~Lrf~V~D~D~~~------ 561 (605)
.++||+|.+.-+|.. ..++|+++.++|-|.|+.+++|.+.. -+.+-+.|.||.....+
T Consensus 33 VN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~ 111 (143)
T cd08683 33 VNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRNPKSAGDTIK 111 (143)
T ss_pred cceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecCCccccceec
Confidence 578999998766653 46689999999999999999998541 12257899999866432
Q ss_pred ----CCCccEEEEEECCcc---CCcc
Q 007399 562 ----KDDFGGQTCLPVSEL---KQGI 580 (605)
Q Consensus 562 ----~ddflGq~~lpL~sL---r~Gy 580 (605)
+|-.||.+.||+..| +.|.
T Consensus 112 ~~~~~DilLG~v~IPl~~Ll~~rsGi 137 (143)
T cd08683 112 IETSGDILLGTVKIPLRDLLTKRSGI 137 (143)
T ss_pred cCcCCcEEEEEEEeeHHHHhhcccCc
Confidence 234778888888876 4554
|
C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc |
| >cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.011 Score=56.63 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=67.9
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCc-ceeeccccCCCCCCeeccEEEEeeecCCc---cEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLR 551 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~-~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lr 551 (605)
..++|+|+++.++... ...|.||++++......- ....|+.+.. -++.|||-++|++...++ |.|.
T Consensus 8 ~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~ 77 (158)
T cd08398 8 SNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC 77 (158)
T ss_pred CCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence 4589999999987531 124779999886421111 1123443332 468999999999876554 8999
Q ss_pred EEEEeccCCC----CCCccEEEEEECCc----cCCccEEEEcc
Q 007399 552 IEVHEYDMSE----KDDFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 552 f~V~D~D~~~----~ddflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
|+||+..... ....+|.+.++|-. |++|...+.|.
T Consensus 78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW 120 (158)
T cd08398 78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 120 (158)
T ss_pred EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEE
Confidence 9999976321 12469999999864 78897666554
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c |
| >cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.011 Score=57.47 Aligned_cols=103 Identities=19% Similarity=0.177 Sum_probs=69.6
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCC---ccEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR 551 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pe---la~Lr 551 (605)
..++|+|+++.++.. .....+.||++.+...... +....|+.+.-+-.+.|||.++|++...+ .|.|.
T Consensus 8 ~~f~i~i~~~~~~~~--------~~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc 79 (173)
T cd08693 8 EKFSITLHKISNLNA--------AERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC 79 (173)
T ss_pred CCEEEEEEEeccCcc--------CCCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence 458999999998853 0123466888887642111 12234554443456999999999987544 48999
Q ss_pred EEEEeccCCC----------------CCCccEEEEEECCc----cCCccEEEEcc
Q 007399 552 IEVHEYDMSE----------------KDDFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 552 f~V~D~D~~~----------------~ddflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
|+||+..... ....||++.++|-. |++|...+.|.
T Consensus 80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 9999865321 13689999999864 78897766664
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty |
| >cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0075 Score=58.37 Aligned_cols=115 Identities=23% Similarity=0.198 Sum_probs=75.5
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCc-ceeecccc--CCCC--CCeeccEEEEeeecCC---
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTL--EDNW--IPSWNEEFEFPLSVPE--- 546 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~-~k~kTkvv--~nn~--NPvWNEtf~F~v~~pe--- 546 (605)
...+.|+|.++.+++.... ....|.||++.+......- ....|+.. .+.+ .+.|||.++|++...+
T Consensus 7 ~~~~~i~v~~~h~~~~~~~------~~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPr 80 (171)
T cd04012 7 TDLLSVTVSSLHRIPPTWV------QSFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPR 80 (171)
T ss_pred cccEEEEEEEeecCChHHh------hccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCCh
Confidence 3458999999998864221 1235679999886422111 12244432 2332 5789999999986544
Q ss_pred ccEEEEEEEeccCCC---------CCCccEEEEEECCc----cCCccEEEEccC-CCCCcccC
Q 007399 547 LALLRIEVHEYDMSE---------KDDFGGQTCLPVSE----LKQGIRAVPLHD-RKGERYKS 595 (605)
Q Consensus 547 la~Lrf~V~D~D~~~---------~ddflGq~~lpL~s----Lr~GyR~IpL~d-~~g~~l~~ 595 (605)
-|.|.|++|+..... ....||++.+||-. |++|...+.|.- ....+++.
T Consensus 81 earL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~~~ 143 (171)
T cd04012 81 ESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPLGP 143 (171)
T ss_pred hHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcCCC
Confidence 489999999876443 34689999999864 789999888853 34444433
|
There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c |
| >cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.012 Score=55.88 Aligned_cols=103 Identities=19% Similarity=0.217 Sum_probs=69.5
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcc-eeeccccCCCCCCeeccEEEEeeecCCc---cEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRI 552 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~-k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf 552 (605)
.++|+|.+..+... ......+.||++++.-...... ...|+.+....++.|||.++|++...++ |.|.|
T Consensus 9 ~~~i~i~~~~~~~~-------~~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~i 81 (156)
T cd08380 9 NLRIKIHGITNINL-------LDSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLCL 81 (156)
T ss_pred CeEEEEEeeccccc-------cCCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEEE
Confidence 47888888776532 0112356788888764221111 2234433333579999999999765444 89999
Q ss_pred EEEeccCCC--CCCccEEEEEECCc----cCCccEEEEcc
Q 007399 553 EVHEYDMSE--KDDFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 553 ~V~D~D~~~--~ddflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
+||+.+..+ ....||++.+||-. |++|...+.|.
T Consensus 82 tl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW 121 (156)
T cd08380 82 SIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLW 121 (156)
T ss_pred EEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEecc
Confidence 999977543 35799999999864 78999888885
|
C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm |
| >cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1 | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.011 Score=62.10 Aligned_cols=135 Identities=19% Similarity=0.273 Sum_probs=90.0
Q ss_pred CCcccceeeeccCccc--ccC-CCCCCC------------------------CChHHHHHHHhCCccEEEEEeecCCCCC
Q 007399 112 TAPVSHYFIYTGHNSY--LTG-NQLNSD------------------------CSDVPIIRALQKGVRVIELDIWPNSKKD 164 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTY--L~g-~Ql~g~------------------------SS~e~Y~~aL~~GCRcvElD~WdG~~~~ 164 (605)
+.||.+..|--|||+- -.. +.-.|. +-......-|..|+|-+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 4699999999999964 222 211111 1112235667899999999996433234
Q ss_pred CceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCC---CHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCh
Q 007399 165 NVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL---TPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241 (605)
Q Consensus 165 ~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc---~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP 241 (605)
+-.++||-. +. ++.||++.|+++.=....=-|||.+. |+ +.++-..+.+.|+++||+.|+.+.. ...-|+.
T Consensus 87 ~~~~~Hg~~--~~-~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL 160 (290)
T cd08616 87 DLYFVHGLY--GI-LVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTL 160 (290)
T ss_pred cEEEEEecc--ch-hHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcH
Confidence 578999842 22 99999999999754444455888886 43 3455567888999999999985432 1345789
Q ss_pred hhcc---CcEEEec
Q 007399 242 ESLK---RRIIIST 252 (605)
Q Consensus 242 ~~Lk---~KIlik~ 252 (605)
++|. .+|+|-.
T Consensus 161 ~~l~~~~krVIi~y 174 (290)
T cd08616 161 EYLWEKGYQVIVFY 174 (290)
T ss_pred HHHHhCCCEEEEEE
Confidence 9997 3355544
|
This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to |
| >KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.00031 Score=73.16 Aligned_cols=98 Identities=22% Similarity=0.282 Sum_probs=76.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC---ccEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe---la~Lrf 552 (605)
..+..++..|.+|.. .+..+..||||+..+...-....+.+|++..|+.||.|||+..+.....+ .-.+|+
T Consensus 93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~Rk 166 (362)
T KOG1013|consen 93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLRK 166 (362)
T ss_pred hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhhe
Confidence 557888999988732 35567789999988765444455688999999999999988766543332 346899
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
.|.|.+-..+++++||..+++..|.+-
T Consensus 167 ~vcdn~~~~~~~sqGq~r~~lkKl~p~ 193 (362)
T KOG1013|consen 167 VVCDNDKKTHNESQGQSRVSLKKLKPL 193 (362)
T ss_pred eeccCcccccccCcccchhhhhccChh
Confidence 999999888899999999999888754
|
|
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0016 Score=75.97 Aligned_cols=94 Identities=19% Similarity=0.263 Sum_probs=75.2
Q ss_pred CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEE
Q 007399 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 552 (605)
Q Consensus 473 p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf 552 (605)
|....++|-|..|.+|.. .|.++..||||.+.+.+ ....-++..+.+++||+|++-|++....|-...+.+
T Consensus 610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk---~~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v 680 (1105)
T KOG1326|consen 610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGK---KRTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIV 680 (1105)
T ss_pred cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeecc---chhhhhhhcCcCCCCcHHHHHHHhhcccchhhccee
Confidence 445556777888888743 45667889999999754 122346778889999999999999988887788999
Q ss_pred EEEeccCCCCCCccEEEEEECCc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSE 575 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~s 575 (605)
.|||+|..+.++.+|+..+.|..
T Consensus 681 ~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 681 EVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred EEEEeecccccchhhceehhhhh
Confidence 99999999889999999988764
|
|
| >cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0098 Score=57.20 Aligned_cols=64 Identities=20% Similarity=0.204 Sum_probs=51.9
Q ss_pred CCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCH
Q 007399 132 QLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTP 209 (605)
Q Consensus 132 Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~ 209 (605)
+...+-|.++|..|+.+||++||+|+.=-.| +.|||.|- -.+|+||++..++ -+.|.||.-...
T Consensus 9 ~~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 9 GEAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 3456899999999999999999999995444 36999998 7789999998776 356777777654
|
The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho |
| >cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0093 Score=60.17 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=34.8
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+-|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 45889999999999999999999996545 47999999887
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0075 Score=60.39 Aligned_cols=40 Identities=20% Similarity=0.317 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+-|.++|..|+..|+.+||+|++=-.| +.+||.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 35788999999999999999999997555 47999998776
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG) |
| >cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.013 Score=56.20 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=60.5
Q ss_pred CCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCCc---cEEEEEEEeccCCCCCCccEEEEEECCc--
Q 007399 502 PPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVSE-- 575 (605)
Q Consensus 502 ~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf~V~D~D~~~~ddflGq~~lpL~s-- 575 (605)
..|.||++.+...... .....|..+.-+-.+.|||-.+|+|...++ |.|.|+||+.+..+....+|.+.+||-.
T Consensus 29 ~~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~ 108 (159)
T cd08397 29 NSDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKD 108 (159)
T ss_pred CCCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCC
Confidence 3577999887642111 112244444434468899999999886655 8999999998755556799999999864
Q ss_pred --cCCccEEEEcc
Q 007399 576 --LKQGIRAVPLH 586 (605)
Q Consensus 576 --Lr~GyR~IpL~ 586 (605)
|++|...+.|.
T Consensus 109 g~Lr~G~~~l~lw 121 (159)
T cd08397 109 GTLRRGRQKLRVW 121 (159)
T ss_pred CcEecCCEEEEEE
Confidence 78898888775
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty |
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0063 Score=69.97 Aligned_cols=86 Identities=22% Similarity=0.182 Sum_probs=70.4
Q ss_pred CcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEE
Q 007399 474 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 474 ~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
..+...|++++|. +. -.|+|..+-..| .+.+||.+.+++.||+||+...|.|...+..+.+|.
T Consensus 52 ~~~~~~~~~~~~~---~~----------~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 114 (644)
T PLN02964 52 FSGIALLTLVGAE---MK----------FKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARIS 114 (644)
T ss_pred ccCeEEEEeehhh---hc----------cCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEEE
Confidence 3466888999886 11 136776555556 578899999999999999999999988888888999
Q ss_pred EEeccCCCCCCccEEEEEECCcc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSEL 576 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sL 576 (605)
|+|.+..+.++++|-+.+.+..+
T Consensus 115 ~~~~~~~s~n~lv~~~e~~~t~f 137 (644)
T PLN02964 115 VFETNRLSKNTLVGYCELDLFDF 137 (644)
T ss_pred EEecCCCCHHHhhhheeecHhhc
Confidence 99999999999999999977665
|
|
| >KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0018 Score=73.22 Aligned_cols=81 Identities=20% Similarity=0.418 Sum_probs=56.7
Q ss_pred eccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCC---------------------------------CC---CCc
Q 007399 522 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS---------------------------------EK---DDF 565 (605)
Q Consensus 522 kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~---------------------------------~~---ddf 565 (605)
-|.+...++||.|+|.|.|.|..-.-..+.+-+||+|.- +. |||
T Consensus 180 atsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDDF 259 (1103)
T KOG1328|consen 180 ATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDDF 259 (1103)
T ss_pred hcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCcccccc
Confidence 466667789999999999999765555688899998753 12 789
Q ss_pred cEEEEEECCccCC-cc-EEEEccCCCCCcccCeEEEEEE
Q 007399 566 GGQTCLPVSELKQ-GI-RAVPLHDRKGERYKSVKLLMHF 602 (605)
Q Consensus 566 lGq~~lpL~sLr~-Gy-R~IpL~d~~g~~l~~atLlv~i 602 (605)
+|...+||.++.+ |. +|.-|--.+.+.--.+.+-+++
T Consensus 260 LGciNipl~EiP~~Gld~WFkLepRS~~S~VqG~~~Lkl 298 (1103)
T KOG1328|consen 260 LGCINIPLAEIPPDGLDQWFKLEPRSDKSKVQGQVKLKL 298 (1103)
T ss_pred ccccccchhcCCcchHHHHhccCcccccccccceEEEEE
Confidence 9999999999964 53 5655654444443333333333
|
|
| >PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0067 Score=60.66 Aligned_cols=41 Identities=22% Similarity=0.249 Sum_probs=32.7
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
..+.|.++|+.|+..|+++||+|||=-.| +.|||+|..++-
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l~ 48 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTLD 48 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBST
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCeee
Confidence 34899999999999999999999996555 479999986543
|
; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B .... |
| >cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.013 Score=58.66 Aligned_cols=40 Identities=13% Similarity=0.227 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+.|..+|..|+..||..||+|++=-.| +.|+|.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 45788999999999999999999997555 47999999886
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor. |
| >cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks) | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.043 Score=53.52 Aligned_cols=102 Identities=15% Similarity=0.132 Sum_probs=64.2
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc---cEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIE 553 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf~ 553 (605)
.++|+|.++..... +.......||++.+.....-....+|.....+-+|.|||-++|++...++ |.|.|+
T Consensus 11 ~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~t 83 (178)
T cd08399 11 KFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQ 83 (178)
T ss_pred CEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEE
Confidence 48888888763321 11122345888877642111122345555445579999999999876554 899999
Q ss_pred EEeccCCC----------------CCCccEEEEEECCc----cCCccEEEEc
Q 007399 554 VHEYDMSE----------------KDDFGGQTCLPVSE----LKQGIRAVPL 585 (605)
Q Consensus 554 V~D~D~~~----------------~ddflGq~~lpL~s----Lr~GyR~IpL 585 (605)
||+..... ....||++.++|-. ||+|...+.+
T Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 84 IYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 99853211 24578889888754 7889766544
|
PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir |
| >cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.022 Score=57.35 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=34.8
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+.|.++|.+|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 46889999999999999999999997555 47999998776
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE. |
| >cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.029 Score=57.34 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
=+-|.++|..|+..||..||+|++=-.| +.|||+|-.||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 4778999999999999999999997555 479999999873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus) | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.015 Score=50.03 Aligned_cols=59 Identities=19% Similarity=0.251 Sum_probs=47.4
Q ss_pred cceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEEEEeccCCCCCCccEEEEEECCccCC
Q 007399 518 TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 578 (605)
Q Consensus 518 ~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~ 578 (605)
....||.+.+...||+|+|+|.|++....+ ..|.|.|+. ...+.+.||++.+.++++.+
T Consensus 34 pv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~--~~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 34 PVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQT--QTPRKRTIGECSLSLRTLST 94 (103)
T ss_pred CccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeec--cCCccceeeEEEeecccCCH
Confidence 456788888878999999999999876555 467888887 34567899999999998754
|
Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos |
| >cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.035 Score=56.30 Aligned_cols=97 Identities=21% Similarity=0.274 Sum_probs=65.8
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc------cchHHHHHHHHhhh--hh-
Q 007399 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------PVELIKCLRSIKEY--AF- 192 (605)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts------~i~f~dvi~aI~~~--AF- 192 (605)
-|||-|.--. ....||..||-.||+|||=- + ++.+|.|-..+.. +..+..+.+.++.. +|
T Consensus 4 hsHNDY~r~~---------Pl~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWRKR---------PLYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred cccccccccc---------chHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 5999998743 45579999999999999953 2 3678888765543 34566666655443 23
Q ss_pred ccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccC
Q 007399 193 VASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229 (605)
Q Consensus 193 ~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~ 229 (605)
....-|++|-||..-+...--.++.-.-+-+.+..+.
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 4456799999999998654433444444456666554
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.1 Score=54.57 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=89.9
Q ss_pred CCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEe---ecC----CCCCCceEeeCCcccccchHHHHH
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI---WPN----SKKDNVDVLHGGTMTAPVELIKCL 184 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~---WdG----~~~~~piv~HG~Tlts~i~f~dvi 184 (605)
+.||++..|--|||+.-.+---.+..--.....=|..|+|-+.|=| ++. ...++-..+|| +-...+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 6799999999999997654322223333445777899999987755 221 01123345565 33567999999
Q ss_pred HHHhhhhhccCCCceEEEecc-----CC-CHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccC---cEEEecC
Q 007399 185 RSIKEYAFVASEYPVVITLED-----HL-TPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKR---RIIISTK 253 (605)
Q Consensus 185 ~aI~~~AF~~S~yPvIlSlE~-----Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~---KIlik~K 253 (605)
+.|+.+.=....=-|||++-+ || .+.+ ....+.+.+.|++.-+.+. ......-|+.++|.+ ++||-.+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~-~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSA-QEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhH-HHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999987555556679999943 44 3554 5778889999988544432 111234578898844 4555443
|
This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl |
| >PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2 | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.039 Score=51.54 Aligned_cols=82 Identities=23% Similarity=0.335 Sum_probs=53.8
Q ss_pred ceEEEEEecCCCCcc--eeeccccCCC-CCCeeccEEEEeeec---CCccEEEEEEEeccCCCCC----CccEEEEEECC
Q 007399 505 FYARVGIAGVPADTV--MKKTKTLEDN-WIPSWNEEFEFPLSV---PELALLRIEVHEYDMSEKD----DFGGQTCLPVS 574 (605)
Q Consensus 505 PyV~V~i~G~p~D~~--k~kTkvv~nn-~NPvWNEtf~F~v~~---pela~Lrf~V~D~D~~~~d----dflGq~~lpL~ 574 (605)
.||++.+.-....-. ...|+.+.-+ .++.|||.++|++.. |--|.|.|+|++.+..... ..||++.+||-
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 366666652111111 2256555545 689999999999864 4458999999997765444 58999999986
Q ss_pred c----cCCccEEEEcc
Q 007399 575 E----LKQGIRAVPLH 586 (605)
Q Consensus 575 s----Lr~GyR~IpL~ 586 (605)
. |++|...++|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 5 67888777774
|
7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A .... |
| >cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.074 Score=55.42 Aligned_cols=137 Identities=17% Similarity=0.229 Sum_probs=89.9
Q ss_pred cCCCCcccceeeeccCccccc---CCCCC---CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007399 109 HDMTAPVSHYFIYTGHNSYLT---GNQLN---SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (605)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~---g~Ql~---g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 182 (605)
.|-+.||++=.|--||||.-. +..+. +.+--..+..=|..|+|-+.|-|=. ...++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 345689999999999998753 22211 1222334577789999999998844 257999963 2468999
Q ss_pred HHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCc-EEEecCC
Q 007399 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRR-IIISTKP 254 (605)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk~K-Ilik~K~ 254 (605)
|++.|+++-=....=-|||++......+......+.+.+.||+.|+.+... .... +.++|.+| |||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~~~-~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQDDS-VFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCCCc-cccc-cHHHHhCCcEEEEEcC
Confidence 999999864333334499999655432222235578899999999865322 1122 66777644 5555554
|
The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u |
| >cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.089 Score=53.41 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.7
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
-+-|..++.+|+..||..||+|+|=-.| +.|||.|=.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 4788999999999999999999995444 37999998876
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.074 Score=54.14 Aligned_cols=39 Identities=21% Similarity=0.368 Sum_probs=33.9
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
-+-|..+|..|+..||+.||+|+.=-.| +.|||.|=.|+
T Consensus 14 pENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l 52 (240)
T cd08566 14 PENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTL 52 (240)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCC
Confidence 3788999999999999999999997655 47999998766
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function. |
| >cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.11 Score=53.66 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+-|..+|.+|+..||..||+|+|=-.| +.|||.|-.+|
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 45788999999999999999999996555 46999997665
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G |
| >cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.1 Score=53.84 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=33.3
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 173 (605)
.-+-|..+|..|+..|+..||+|+|=-.| +.|||+|..+
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 56889999999999999999999995444 4799999863
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.12 Score=52.01 Aligned_cols=78 Identities=22% Similarity=0.342 Sum_probs=54.2
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc------------------------cc-hHHHHHHHH
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------------------------PV-ELIKCLRSI 187 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts------------------------~i-~f~dvi~aI 187 (605)
..-+-|.+++..|+..||+.||+|++=-.| +.|||+|=.|+.. +| +|.||++.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 345889999999999999999999996544 4799999877531 24 589999876
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHH
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT 220 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~ 220 (605)
++. +.|-||.-.. .....+++.++
T Consensus 90 ~~~--------~~l~iEiK~~-~~~~~~~~~l~ 113 (226)
T cd08568 90 PND--------AIINVEIKDI-DAVEPVLEIVE 113 (226)
T ss_pred CCC--------cEEEEEECCc-cHHHHHHHHHH
Confidence 441 3466666543 22334444444
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.16 Score=43.67 Aligned_cols=63 Identities=13% Similarity=0.340 Sum_probs=49.9
Q ss_pred HHHHHHHHhhC-C---CCcCHHHHHHHHHHH--cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE-N---GTMTVDHLHRFLIEV--QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~-~---~~~~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|-.+|.+|++ + ++|+.++|+..|.++ .++. .+.+++.+++..... ...+.++++.|..+|..
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~------d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDR------NKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcC------CCCCCCcHHHHHHHHHH
Confidence 47789999996 2 599999999999752 4664 689999999887642 23478999999998865
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.23 Score=49.01 Aligned_cols=48 Identities=15% Similarity=0.109 Sum_probs=42.3
Q ss_pred CChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007399 137 CSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (605)
Q Consensus 137 SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (605)
-+..++.+|+.. .-||+|++.- | +.+||.|=.|+..-.+|+||++++.
T Consensus 7 NTl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 7 NTITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 358999999998 9999999986 5 5799999999988888999998874
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.063 Score=55.45 Aligned_cols=41 Identities=20% Similarity=0.314 Sum_probs=35.7
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
-+-|.++|..|+..||++||+|++=-.| +.|||.|-.||..
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r 54 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLDR 54 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCcccc
Confidence 5788999999999999999999997655 4799999988643
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4. |
| >cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.072 Score=54.30 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+-|.++|.+|+..||++||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45789999999999999999999995444 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.11 Score=53.46 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 14 aPENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 14 APENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 34788999999999999999999997555 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo |
| >cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins | Back alignment and domain information |
|---|
Probab=92.74 E-value=0.13 Score=52.70 Aligned_cols=41 Identities=20% Similarity=0.192 Sum_probs=35.7
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+-|..+|..|+..||..||+|+|=-.| +.|||.|-.||.
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l~ 53 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETLD 53 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCccc
Confidence 35889999999999999999999997555 479999998873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.23 Score=55.72 Aligned_cols=83 Identities=22% Similarity=0.294 Sum_probs=67.1
Q ss_pred eeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCC----CCCCccEEEEEECCccC-CccEEEEccCCCCCcccC
Q 007399 521 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS----EKDDFGGQTCLPVSELK-QGIRAVPLHDRKGERYKS 595 (605)
Q Consensus 521 ~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~----~~ddflGq~~lpL~sLr-~GyR~IpL~d~~g~~l~~ 595 (605)
.+|.++.+..||.|-+.|.....+.....|+|.|+|-+.. ...+|+|++..-++.+- ..-+.++|.-+.++....
T Consensus 43 ~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~~ 122 (529)
T KOG1327|consen 43 GRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAGS 122 (529)
T ss_pred cceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCCc
Confidence 4789999999999999999888888888999999997753 34689999998888764 455667777777777777
Q ss_pred eEEEEEEE
Q 007399 596 VKLLMHFE 603 (605)
Q Consensus 596 atLlv~i~ 603 (605)
+++.|+.+
T Consensus 123 g~iti~ae 130 (529)
T KOG1327|consen 123 GTITISAE 130 (529)
T ss_pred ccEEEEee
Confidence 78888765
|
|
| >cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.19 Score=52.13 Aligned_cols=42 Identities=14% Similarity=0.126 Sum_probs=35.5
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|=.|+.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 445778999999999999999999996544 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated. |
| >cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=92.19 E-value=0.16 Score=51.38 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+-|..+|.+|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 4778999999999999999999997555 479999999874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.17 Score=53.27 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+-|.++|..|+..||+.||+|+|=-.| +.|||.|=.|+.
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l~ 79 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENLL 79 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCcccc
Confidence 4788999999999999999999996545 479999988873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family. |
| >cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins | Back alignment and domain information |
|---|
Probab=92.04 E-value=0.18 Score=53.72 Aligned_cols=43 Identities=16% Similarity=0.177 Sum_probs=36.4
Q ss_pred CCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 132 QLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 132 Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.+.-+.|.++|..|+..||..||+||+=-.| +.|||.|-.+|.
T Consensus 11 ~~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 11 GYLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 3456889999999999999999999996545 479999998873
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP |
| >PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.2 Score=54.22 Aligned_cols=42 Identities=19% Similarity=0.199 Sum_probs=36.1
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+.=+.|.++|..|+..|+.-||+|+|=-.| +.|||.|..+|.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 345889999999999999999999997555 479999998764
|
|
| >cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.22 Score=51.97 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=39.6
Q ss_pred cccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 127 YL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
|+.+.-..-+.+..+|..|+..|+..||+||+=-.| +.|||+|=.|+..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeEe
Confidence 454444556889999999999999999999996544 4799999988753
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism. |
| >KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=91.57 E-value=0.14 Score=54.72 Aligned_cols=106 Identities=24% Similarity=0.239 Sum_probs=75.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+..|.|.||.|++|... ....+.++|||+|++.+...-..+.+|+...++..|.+-....|.=..| ...|.+.|
T Consensus 268 ~g~l~vEii~ar~l~~k-----~~~k~~~apyVkVYlL~~g~c~ak~ktk~A~kT~~plyqq~l~f~~sp~-~k~Lq~tv 341 (405)
T KOG2060|consen 268 KGDLEVEIIRARGLVVK-----PGSKSLPAPYVKVYLLENGFCIAKKKTKSARKTLDPLYQQQLSFDQSPP-GKYLQGTV 341 (405)
T ss_pred cCceeEEEEeccccccc-----CCcccccCceeEEEEcCCCceecccccccccccCchhhhhhhhhccCCC-ccEEEEEE
Confidence 35689999999999642 1222468999999998755545678999999999998887777765444 46788888
Q ss_pred Ee-ccCCCCCCccEEEEEECCccC----CccEEEEcc
Q 007399 555 HE-YDMSEKDDFGGQTCLPVSELK----QGIRAVPLH 586 (605)
Q Consensus 555 ~D-~D~~~~ddflGq~~lpL~sLr----~GyR~IpL~ 586 (605)
|. +....+..|+|.+.+-+.+|. ++.-|.+|+
T Consensus 342 ~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlf 378 (405)
T KOG2060|consen 342 WGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLF 378 (405)
T ss_pred eccccccchHHHhhHHHHHhhhhccccccceeeeecc
Confidence 84 444445678888877777763 344555554
|
|
| >cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins | Back alignment and domain information |
|---|
Probab=91.27 E-value=0.21 Score=52.80 Aligned_cols=42 Identities=17% Similarity=0.239 Sum_probs=35.7
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
.-+.+..+|..|+..|+..||+|++=-.| +.+||.|-.+|..
T Consensus 13 ~PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~r 54 (302)
T cd08571 13 YPDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLDN 54 (302)
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhcC
Confidence 34778999999999999999999996555 4799999998743
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv |
| >cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5 | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.22 Score=51.77 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=34.0
Q ss_pred CCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
+-+..++..|+..||..||+|||=-.| +.|||+|=.|+
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 678999999999999999999996555 47999999888
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs. |
| >cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.21 Score=52.51 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.=+.|..+|..|+..||..||+|++=-.| +.|||.|-.+|-
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 34789999999999999999999997555 479999988774
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI), |
| >cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.25 Score=52.52 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=39.6
Q ss_pred cCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 123 SHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.|.-| .-..-+.|..+|..|+..||..||+|++=-.| +.|||.|-.||.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 66653 22345889999999999999999999997655 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia |
| >cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins | Back alignment and domain information |
|---|
Probab=90.72 E-value=0.24 Score=51.54 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=34.8
Q ss_pred CCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+-+..+|..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 889999999999999999999996555 479999998875
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp |
| >cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins | Back alignment and domain information |
|---|
Probab=90.45 E-value=0.38 Score=48.61 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=35.2
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+.|.+||.+|+..|++.||+|+.=-.| +.|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 45889999999999999999999995444 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip |
| >KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.28 E-value=0.38 Score=52.07 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=84.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-C----Cc---
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P----EL--- 547 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-p----el--- 547 (605)
..|.+.|.++++.+..... .-.|.||++++.-......+.+|.+++++-.|.|+|.|...+.- + ++
T Consensus 367 ~elel~ivrg~~~pvp~gp------~hld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~ 440 (523)
T KOG3837|consen 367 QELELAIVRGQKNPVPGGP------MHLDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRR 440 (523)
T ss_pred hHhHHHHhhcccCCCCCCc------hhHHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHH
Confidence 3467777788776542111 11467999887543323457789999999999999999988753 2 11
Q ss_pred ---cEEEEEEEeccCC-CCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 548 ---ALLRIEVHEYDMS-EKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 548 ---a~Lrf~V~D~D~~-~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
--+.|.|+....+ .+|.++|.+.+.|.-|..- ...+||+| |...-++.|-|++.+
T Consensus 441 fkr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~D--GRK~vGGkLevKvRi 502 (523)
T KOG3837|consen 441 FKRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKD--GRKAVGGKLEVKVRI 502 (523)
T ss_pred HHhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccc--cccccCCeeEEEEEE
Confidence 2488999987754 4577999999988877654 34689987 445557788888764
|
|
| >PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=90.06 E-value=0.29 Score=50.02 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=35.6
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+-|.+++..|+..|+..||+||.=-.| +.|||+|=.||.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45778999999999999999999997555 479999998875
|
|
| >cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins | Back alignment and domain information |
|---|
Probab=90.06 E-value=0.32 Score=51.59 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=36.7
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
+.-+.+.++|..|+..||..||+|++=-.| +.|||.|-.+|..
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~r 54 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELSG 54 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCcccc
Confidence 456889999999999999999999996555 4799999988743
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively. |
| >cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins | Back alignment and domain information |
|---|
Probab=89.93 E-value=1.2 Score=44.02 Aligned_cols=41 Identities=24% Similarity=0.418 Sum_probs=31.6
Q ss_pred cceeeccccCCCCCCeeccEEEEeeecC--CccEEEEEEEecc
Q 007399 518 TVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYD 558 (605)
Q Consensus 518 ~~k~kTkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D 558 (605)
...++|-+..-+-+|.|+|++...+... +.+-|+|.++...
T Consensus 52 ~se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S 94 (189)
T cd08695 52 CSEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCS 94 (189)
T ss_pred cceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEee
Confidence 3456788888788999999999887654 3478999887744
|
Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int |
| >cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 | Back alignment and domain information |
|---|
Probab=89.91 E-value=0.85 Score=39.08 Aligned_cols=63 Identities=17% Similarity=0.291 Sum_probs=47.7
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCC----HHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKAS----KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|.+|+.. ..|+.++|+..|...-++ ..+ .+++..++..+-. ...+.++++.|..++.+
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~------d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT------NQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHHH
Confidence 477899999943 689999999999854433 244 7788888887642 23468999999998875
|
Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth. |
| >cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=89.68 E-value=1.7 Score=37.87 Aligned_cols=64 Identities=14% Similarity=0.330 Sum_probs=46.1
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
-|..+|.+||++ .+|+..+|+..|+.+=.. ...+.+.+..|+...- ..+.+.++|.+|..++..
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD------~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLD------DCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhC------CCCCCcCcHHHHHHHHHH
Confidence 467899999977 899999999999765321 0124566777776643 224578999999988764
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain | Back alignment and domain information |
|---|
Probab=89.67 E-value=1.8 Score=38.07 Aligned_cols=75 Identities=21% Similarity=0.243 Sum_probs=45.1
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCc-ceeeccccCCCCCCeeccEEEEeeecCCc---cEEEEE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIE 553 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~-~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf~ 553 (605)
+.+.+...++..... ..+..+.||++++......- ....|+.+.-+..+.|||-.+|++...++ |.|.|+
T Consensus 13 ~~~~~~~~~~~~l~~------~~~~~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~ 86 (100)
T smart00142 13 LVITIALIHGIPLNW------SRDYSDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCIT 86 (100)
T ss_pred eEEEEEEeeCCCccc------ccCcceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEEE
Confidence 455666665554311 11114779999886422111 12245444333458999999999875554 899999
Q ss_pred EEecc
Q 007399 554 VHEYD 558 (605)
Q Consensus 554 V~D~D 558 (605)
||+..
T Consensus 87 i~~~~ 91 (100)
T smart00142 87 IYEVK 91 (100)
T ss_pred EEEee
Confidence 99854
|
Outlier of C2 family. |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=89.31 E-value=1.3 Score=38.25 Aligned_cols=64 Identities=11% Similarity=0.255 Sum_probs=46.2
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQK---EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
-|..+|.+|+.. .+|+.++|+.||..+-. ....+...+.+|+..+-. .+.+.+++++|+.++..
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~------d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL------NSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHHH
Confidence 467889998832 38999999999998621 112355678888876531 23468999999988764
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional | Back alignment and domain information |
|---|
Probab=89.24 E-value=4.5 Score=44.05 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=68.8
Q ss_pred HHHHHhCCccEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHHHhhhhhcc--CCCceEEEeccC---CCHHHHHHH
Q 007399 142 IIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA--SEYPVVITLEDH---LTPDLQAKV 215 (605)
Q Consensus 142 Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~--S~yPvIlSlE~H---c~~~qQ~~m 215 (605)
..+=|..|+|-+.|=|=-.+ +.++-.+.||.. .++|.||++.|+++.=.. ..=-|||.+-.. =....|.+.
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 34557889999888774322 224556777652 478999999999854332 234577777442 234555566
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCChhhcc-----CcEEEecCCC
Q 007399 216 AEMVTQTLGEILFTPGSECLKEFPSPESLK-----RRIIISTKPP 255 (605)
Q Consensus 216 a~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk-----~KIlik~K~~ 255 (605)
.+.|+. |||+|. |+.... . -+.++|- .+|+|-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 667776 999987 433322 2 3788887 6788887554
|
|
| >cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=89.11 E-value=0.53 Score=47.62 Aligned_cols=40 Identities=23% Similarity=0.143 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+-|..|+..|++.|++-||+|++=-.| +.+||.|-.|++
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~~ 53 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDES 53 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcCc
Confidence 4788999999999999999999997555 479999988763
|
This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues. |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=88.81 E-value=1.3 Score=38.19 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=49.5
Q ss_pred HHHHHHHHhhC-C--CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE-N--GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~-~--~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|+.|.. + ++|+..+|+..|..+=++ .++. +++.++|...-. ...+.+++++|..+|.+
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~------d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV------NQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHHH
Confidence 57889999997 4 899999999999975344 3566 788888876541 24578999999999876
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins | Back alignment and domain information |
|---|
Probab=88.56 E-value=0.52 Score=49.77 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=36.2
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+.-+.|..+|..|+..||..||+|++=-.| +.+||.|=.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 445889999999999999999999997555 479999988874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP |
| >KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=88.25 E-value=0.31 Score=57.67 Aligned_cols=99 Identities=20% Similarity=0.279 Sum_probs=69.5
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eec--------CCcc
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSV--------PELA 548 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~--------pela 548 (605)
+++-|..|..|.. .++.+..|||..|...| +.+.|.++.+++||.|+.+..|. +.. ...-
T Consensus 208 lR~yiyQar~L~a------~dk~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~pp 276 (1105)
T KOG1326|consen 208 LRSYIYQARALGA------PDKDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPP 276 (1105)
T ss_pred hHHHHHHHHhhcC------CCcccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCC
Confidence 4444555555542 24446689999999887 56689999999999999999885 321 1124
Q ss_pred EEEEEEEeccCCCCCCccEEEEEECC-ccCCc-cEEEEccC
Q 007399 549 LLRIEVHEYDMSEKDDFGGQTCLPVS-ELKQG-IRAVPLHD 587 (605)
Q Consensus 549 ~Lrf~V~D~D~~~~ddflGq~~lpL~-sLr~G-yR~IpL~d 587 (605)
.+.|.|+|.|..+.++|.|....... .+.+| -.|+|++.
T Consensus 277 i~v~e~yd~dr~g~~ef~gr~~~~p~V~~~~p~lkw~p~~r 317 (1105)
T KOG1326|consen 277 IRVFEVYDLDRSGINEFKGRKKQRPYVMVQCPALKWVPTMR 317 (1105)
T ss_pred eEEEEeehhhhhchHHhhcccccceEEEecCCccceEEeec
Confidence 68899999999999999998654333 23333 46777764
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=88.24 E-value=2.1 Score=37.00 Aligned_cols=64 Identities=13% Similarity=0.264 Sum_probs=47.4
Q ss_pred HHHHHHHHhhC--C-C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE--N-G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~--~-~-~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
++..+|+.|.. + + .|+.++|+..|..+.++ ...+.+.+.+|+..+-. .+.+.+++++|..+|.+
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~------n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS------NKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC------CCCCCCCHHHHHHHHHH
Confidence 57778999993 3 4 59999999999876432 12366788888888642 23468999999998765
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A | Back alignment and domain information |
|---|
Probab=87.97 E-value=1.9 Score=41.95 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=36.1
Q ss_pred eeeccccCCCCCCeeccEEEEeeecC--CccEEEEEEEeccCCCCC---CccEEEEEECCc----cCCccEEEEcc
Q 007399 520 MKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEKD---DFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 520 k~kTkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D~~~~d---dflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
...|.+...+-+|.|+|+|..++..+ +-.-|.|++++.....+. ..+|-+.+||-. +..|-..+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 45677777778999999999887643 347899999986543211 466777777654 23445556664
|
|
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=87.94 E-value=0.94 Score=34.56 Aligned_cols=50 Identities=14% Similarity=0.244 Sum_probs=40.3
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 38 GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 38 ~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
+.|+.++|+.+| ..++....+.+++..|+..+-.. +.+.+++++|..+|.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHH
Confidence 568999999999 55666437899999999988632 347899999999985
|
... |
| >cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins | Back alignment and domain information |
|---|
Probab=87.64 E-value=0.65 Score=48.80 Aligned_cols=43 Identities=14% Similarity=0.177 Sum_probs=36.3
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
..-+.+..+|..|+..||.-||+||+=-.| +.|||+|=.++..
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~r 61 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTISV 61 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCccee
Confidence 345889999999999999999999996555 4799999887643
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins | Back alignment and domain information |
|---|
Probab=87.36 E-value=3.7 Score=40.67 Aligned_cols=68 Identities=15% Similarity=0.171 Sum_probs=48.2
Q ss_pred ceeeccccCCCCCCeeccEEEEeeecC--CccEEEEEEEeccCCCC----CCccEEEEEECC-----ccCCccEEEEcc
Q 007399 519 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEK----DDFGGQTCLPVS-----ELKQGIRAVPLH 586 (605)
Q Consensus 519 ~k~kTkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D~~~~----ddflGq~~lpL~-----sLr~GyR~IpL~ 586 (605)
..++|-+..-+-+|.|+|++...+... +-+-|+|.++....... ...+|-+.+||- .|+.|-+.++|+
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 456777777778999999998887644 34789999976442211 246788888874 277787777775
|
Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen |
| >cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins | Back alignment and domain information |
|---|
Probab=87.28 E-value=0.69 Score=49.28 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=36.5
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
..-|-|..+|..|+..||.-||+|++=-.| +.|||.|=.||..
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~R 76 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLKR 76 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCcccc
Confidence 445889999999999999999999997555 4799999988743
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation. |
| >KOG1327 consensus Copine [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=86.33 E-value=1.2 Score=50.20 Aligned_cols=82 Identities=22% Similarity=0.302 Sum_probs=58.7
Q ss_pred cCCCCCCCceEEEEEec-CCCCcceeeccccCCCCCCeeccEE-EEe-eecCC-ccEEEEEEEeccCCCCCCccEEEEEE
Q 007399 497 FDAYSPPDFYARVGIAG-VPADTVMKKTKTLEDNWIPSWNEEF-EFP-LSVPE-LALLRIEVHEYDMSEKDDFGGQTCLP 572 (605)
Q Consensus 497 ~d~~s~~DPyV~V~i~G-~p~D~~k~kTkvv~nn~NPvWNEtf-~F~-v~~pe-la~Lrf~V~D~D~~~~ddflGq~~lp 572 (605)
.+.++..|||.++.-.. ......-++|.++++++||.|-... ... +...+ -+.+.+.+||++..++.+++|++.-+
T Consensus 151 kd~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt 230 (529)
T KOG1327|consen 151 KDFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTT 230 (529)
T ss_pred ccccccCCcceEEEEecCCCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccCCCCCcCceeEeccc
Confidence 46678899998776432 2222235689999999999997532 221 22222 35688999999988888999999999
Q ss_pred CCccCC
Q 007399 573 VSELKQ 578 (605)
Q Consensus 573 L~sLr~ 578 (605)
+..++.
T Consensus 231 ~~~~~~ 236 (529)
T KOG1327|consen 231 LSELQE 236 (529)
T ss_pred HHHhcc
Confidence 998864
|
|
| >cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins | Back alignment and domain information |
|---|
Probab=84.96 E-value=2.2 Score=41.38 Aligned_cols=66 Identities=18% Similarity=0.251 Sum_probs=46.8
Q ss_pred ccccCCCCCCeeccEEEEeeecC--CccEEEEEEEeccCCC-----CCCccEEEEEECCc-----cCCccEEEEccCC
Q 007399 523 TKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-----KDDFGGQTCLPVSE-----LKQGIRAVPLHDR 588 (605)
Q Consensus 523 Tkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D~~~-----~ddflGq~~lpL~s-----Lr~GyR~IpL~d~ 588 (605)
|.++..+-+|.|+|++...+... +..-|.|++++-+... ....+|-+.+||-. ++.|...+|++-.
T Consensus 56 ~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k~ 133 (178)
T cd08679 56 TSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYKY 133 (178)
T ss_pred EEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEec
Confidence 44444448899999998887533 3578999999865332 24678888888877 6778777777633
|
Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=84.62 E-value=2.9 Score=35.82 Aligned_cols=65 Identities=12% Similarity=0.238 Sum_probs=48.7
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|.++|+.|. .+ + .|+.++|+..|+..-++. ..+.+.+.+|+..+-.. ..+.++++.|..++..
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d------~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN------GDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHHH
Confidence 47889999996 43 6 499999999998643331 24678899999987521 3467999999988765
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen [] | Back alignment and domain information |
|---|
Probab=84.38 E-value=23 Score=32.47 Aligned_cols=114 Identities=19% Similarity=0.183 Sum_probs=67.7
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccC-CCCCCeeccEEEEeeec---C-----C
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSV---P-----E 546 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~-nn~NPvWNEtf~F~v~~---p-----e 546 (605)
-.+.|+|....+++. .+..|.|.............|.... .+..-.|||+|.+.+.. . +
T Consensus 7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~ 74 (143)
T PF10358_consen 7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQ 74 (143)
T ss_pred EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEe
Confidence 347778888777642 1123334433211111123444333 24567899999988652 1 1
Q ss_pred ccEEEEEEEeccCCCCCCccEEEEEECCccCCc-----cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 547 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 547 la~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~G-----yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
--.+.|.|+.....++...+|.+.|.|...-.- .+.++|... +-..|+|.|.|.+
T Consensus 75 ~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~ 134 (143)
T PF10358_consen 75 PKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISL 134 (143)
T ss_pred eEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEE
Confidence 136889998875334336899999999987542 245677665 4456788887765
|
Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1). |
| >COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.67 E-value=1.2 Score=45.33 Aligned_cols=38 Identities=24% Similarity=0.276 Sum_probs=33.2
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 173 (605)
-+-|.++|..|+..|+.+||+|+.=-.| +.+||+|=+|
T Consensus 19 PENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~~ 56 (257)
T COG0584 19 PENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDET 56 (257)
T ss_pred CcchHHHHHHHHHcCCCEEEeeccCccC-CcEEEecccc
Confidence 3788999999999999999999997655 4799999873
|
|
| >cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases | Back alignment and domain information |
|---|
Probab=83.44 E-value=1.1 Score=45.58 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=33.4
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+-|..+|..|+..|+ -||+|++=-.| +.|||+|=.|+.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 4678999999999999 89999997655 479999988764
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins | Back alignment and domain information |
|---|
Probab=83.41 E-value=1.2 Score=48.11 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCC-cc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG-TM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~-Tl 174 (605)
.-+-|.++|..|+.+|+.-||+|++=-.| +.|||.|=. +|
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~~~L 69 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQCDL 69 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 35789999999999999999999997555 479999985 44
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. |
| >cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Probab=83.32 E-value=5.1 Score=29.73 Aligned_cols=59 Identities=20% Similarity=0.438 Sum_probs=44.7
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHH
Q 007399 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (605)
Q Consensus 27 i~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (605)
+..+|..|-.+ +.++.++|...++... . ..+.+.+..++.++... ..+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHh
Confidence 56788888754 7899999999998643 3 35777788888887522 23579999998876
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. |
| >cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4 | Back alignment and domain information |
|---|
Probab=83.05 E-value=1.2 Score=47.12 Aligned_cols=39 Identities=26% Similarity=0.461 Sum_probs=34.3
Q ss_pred CCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+-+.++|..|+..|+..||+||+--.| +.+||.|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 678899999999999999999997655 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet. |
| >PF15627 CEP76-C2: CEP76 C2 domain | Back alignment and domain information |
|---|
Probab=82.94 E-value=15 Score=35.14 Aligned_cols=126 Identities=19% Similarity=0.186 Sum_probs=82.5
Q ss_pred CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC------
Q 007399 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE------ 546 (605)
Q Consensus 473 p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe------ 546 (605)
|.+..|.|+|+.|+-...-. .+.-+..+..+.+.+.= ..++++|+.+.-..+|.++|.|-|.+....
T Consensus 6 ~~~~yL~l~vlgGkAFld~l----~~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~ 78 (156)
T PF15627_consen 6 PGRRYLHLRVLGGKAFLDHL----QEPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGST 78 (156)
T ss_pred CCceEEEEEEeCchhHhhhh----hccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccc
Confidence 34567999999997542100 00002334444454431 137899999999999999999999986442
Q ss_pred c-------cEEEEEEEeccCCCCCCccEEEEEECCc-cCCccE----EEEccCCCCC-cccCeEEEEEEEEC
Q 007399 547 L-------ALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGIR----AVPLHDRKGE-RYKSVKLLMHFEFI 605 (605)
Q Consensus 547 l-------a~Lrf~V~D~D~~~~ddflGq~~lpL~s-Lr~GyR----~IpL~d~~g~-~l~~atLlv~i~f~ 605 (605)
. .-|.+.|--.|..+...++|...+.-.. |..|+. .|.|....++ .++-+-|-++++++
T Consensus 79 ~~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lELl 150 (156)
T PF15627_consen 79 ATTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLELL 150 (156)
T ss_pred hhHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEee
Confidence 1 2467777766766666889988887765 456774 4677776666 34556777888763
|
|
| >KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=82.49 E-value=1.7 Score=46.75 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+.|..||.+|...|+.|||+|+=...| +.+|+.|=-|..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~ 121 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTV 121 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcce
Confidence 4678999999999999999999999887 578999976655
|
|
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=82.41 E-value=5.5 Score=34.35 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=47.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|..+-.+ +.++.++|+.+|+.. ..+.+++..|+..+... ..+.+++++|..+|..
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~~------~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADID------NDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcCC------CCCCcCHHHHHHHHHH
Confidence 34677788888643 889999999999872 35778888888876421 3467999999988775
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins | Back alignment and domain information |
|---|
Probab=82.36 E-value=1.5 Score=47.41 Aligned_cols=41 Identities=15% Similarity=0.163 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-|-+..+|..|+..||..||+|++=-.| +.|||.|=.||.
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34778999999999999999999996555 479999998874
|
This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti |
| >cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins | Back alignment and domain information |
|---|
Probab=81.72 E-value=1.8 Score=45.73 Aligned_cols=39 Identities=5% Similarity=-0.084 Sum_probs=32.8
Q ss_pred CChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 137 CSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 137 SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
++...++.|...|++-||+|++=-.| +.|||+|-+++..
T Consensus 16 ~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~~ 54 (300)
T cd08578 16 KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVPV 54 (300)
T ss_pred CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceEe
Confidence 46789999999999999999996444 4799999988743
|
This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=81.16 E-value=6.3 Score=36.28 Aligned_cols=65 Identities=18% Similarity=0.395 Sum_probs=49.5
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
...++..+|..|-.+ +.++.++|..+|...+ . ..+.+++..++..+... ..+.++++.|..++.+
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~l~~~~~~~~~~~~d~~------~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-TITDEELQEMIDEADRN------GDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHhc
Confidence 456788899888643 7899999999998654 3 46888888898887622 2356999999988875
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 605 | ||||
| 2fju_B | 799 | Activated Rac1 Bound To Its Effector Phospholipase | 8e-43 | ||
| 1djg_A | 624 | Phosphoinositide-Specific Phospholipase C-Delta1 Fr | 1e-31 | ||
| 1qas_A | 622 | 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodies | 1e-31 | ||
| 3qr0_A | 816 | Crystal Structure Of S. Officinalis Plc21 Length = | 2e-22 | ||
| 3qr1_A | 813 | Crystal Structure Of L. Pealei Plc21 Length = 813 | 2e-22 | ||
| 3ohm_B | 885 | Crystal Structure Of Activated G Alpha Q Bound To I | 1e-21 | ||
| 4gnk_B | 1235 | Crystal Structure Of Galphaq In Complex With Full-l | 1e-21 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 9e-05 | ||
| 4dnl_A | 140 | Crystal Structure Of A C2 Domain Of A Protein Kinas | 1e-04 | ||
| 1a25_A | 149 | C2 Domain From Protein Kinase C (Beta) Length = 149 | 2e-04 | ||
| 1dsy_A | 139 | C2 Domain From Protein Kinase C (Alpha) Complexed W | 2e-04 | ||
| 3gpe_A | 137 | Crystal Structure Analysis Of Pkc (Alpha)-C2 Domain | 2e-04 | ||
| 2uzp_A | 144 | Crystal Structure Of The C2 Domain Of Human Protein | 7e-04 |
| >pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta 2 Length = 799 | Back alignment and structure |
|
| >pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat Complexed With Lanthanum Length = 624 | Back alignment and structure |
|
| >pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase Delta 1 Length = 622 | Back alignment and structure |
|
| >pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21 Length = 816 | Back alignment and structure |
|
| >pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21 Length = 813 | Back alignment and structure |
|
| >pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its Effector Phospholipase C Beta 3 Length = 885 | Back alignment and structure |
|
| >pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length Human Plcbeta3 Length = 1235 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|4DNL|A Chain A, Crystal Structure Of A C2 Domain Of A Protein Kinase C Alpha (Prkca) From Homo Sapiens At 1.90 A Resolution Length = 140 | Back alignment and structure |
|
| >pdb|1A25|A Chain A, C2 Domain From Protein Kinase C (Beta) Length = 149 | Back alignment and structure |
|
| >pdb|1DSY|A Chain A, C2 Domain From Protein Kinase C (Alpha) Complexed With Ca2+ And Phosphatidylserine Length = 139 | Back alignment and structure |
|
| >pdb|3GPE|A Chain A, Crystal Structure Analysis Of Pkc (Alpha)-C2 Domain Complexed With Ca2+ And Ptdins(4,5)p2 Length = 137 | Back alignment and structure |
|
| >pdb|2UZP|A Chain A, Crystal Structure Of The C2 Domain Of Human Protein Kinase C Gamma. Length = 144 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 605 | |||
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 1e-153 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 1e-135 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 1e-135 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 1e-129 | |
| 3h4x_A | 339 | Phosphatidylinositol-specific phospholipase C1; PI | 2e-19 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 7e-12 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 1e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 3e-10 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 5e-10 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 6e-10 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 8e-09 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 9e-09 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 2e-08 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 2e-08 | |
| 3rdl_A | 137 | Protein kinase C alpha type; protein kinase PKC, t | 5e-08 | |
| 1a25_A | 149 | CALB, protein kinase C (beta); calcium++/phospholi | 6e-08 | |
| 2enp_A | 147 | B/K protein; C2 type 1,beta sandwich, structural g | 6e-08 | |
| 3f04_A | 143 | Synaptotagmin-1; C2A, calcium, cell junction, cyto | 7e-08 | |
| 1wfm_A | 138 | Synaptotagmin XIII; C2 domain, exocytosis, neurotr | 8e-08 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 1e-07 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 5e-06 | |
| 1rsy_A | 152 | Synaptotagmin I; calcium/phospholipid binding prot | 1e-07 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 2e-07 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 6e-07 | |
| 3kwu_A | 148 | MUNC13-1; calcium binding protein, phospholipid bi | 3e-07 | |
| 3fdw_A | 148 | Synaptotagmin-like protein 4; structural genomics, | 3e-07 | |
| 2z0u_A | 155 | WW domain-containing protein 1; C2 domain, alterna | 5e-07 | |
| 2cm5_A | 166 | Rabphilin-3A; protein transport, zinc-finger, Ca2+ | 6e-07 | |
| 3fbk_A | 153 | RGS3, RGP3, regulator of G-protein signaling 3; al | 1e-06 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 1e-06 | |
| 1w15_A | 153 | Synaptotagmin IV; metal binding protein, endocytos | 2e-06 | |
| 2d8k_A | 141 | Synaptotagmin VII; exocytosis, calcium binding, ly | 2e-06 | |
| 3pyc_A | 132 | E3 ubiquitin-protein ligase smurf1; phospholipid b | 2e-06 | |
| 2q3x_A | 171 | Regulating synaptic membrane exocytosis protein 1; | 2e-06 | |
| 3n5a_A | 138 | Synaptotagmin-7; calcium/phospholipid binding prot | 3e-06 | |
| 1cjy_A | 749 | CPLA2, protein (cytosolic phospholipase A2); lipid | 3e-06 | |
| 1ugk_A | 138 | Synaptotagmin IV, KIAA1342; beta sandwich, structu | 4e-06 | |
| 2chd_A | 142 | Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium | 4e-06 | |
| 1tjx_A | 159 | Similar to synaptotagmini/P65; C2B domain, calcium | 7e-06 | |
| 1rh8_A | 142 | Piccolo protein; beta-sandwich, metal binding prot | 8e-06 | |
| 2dmg_A | 142 | KIAA1228 protein; beta-sandwich, structural genomi | 1e-05 | |
| 2b3r_A | 134 | Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA | 2e-05 | |
| 2bwq_A | 129 | Regulating synaptic membrane exocytosis protein 2; | 2e-05 | |
| 3nsj_A | 540 | Perforin-1; pore forming protein, immune system; H | 3e-05 | |
| 3l9b_A | 144 | Otoferlin; C2-domain, beta-sheets, cell membrane, | 3e-05 | |
| 1v27_A | 141 | Regulating synaptic membrane exocytosis protein 2; | 5e-05 | |
| 2cjs_A | 167 | UNC-13 homolog A, MUNC13-1; neurotransmitter trans | 5e-05 | |
| 3bxj_A | 483 | RAS GTPase-activating protein syngap; GTPase activ | 3e-04 |
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 453 bits (1165), Expect = e-153
Identities = 172/582 (29%), Positives = 256/582 (43%), Gaps = 45/582 (7%)
Query: 27 VKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ F++ + + T++V+ L FL Q+E++A A ++I+ +R +
Sbjct: 82 IDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYE--PSETAKAQRQMT 139
Query: 86 LEAFFKYLFGDINPPLSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIR 144
+ F YL S V+ DM P+SHY + + HN+YL +QL S IR
Sbjct: 140 KDGFLMYLLSADGNAFSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIR 199
Query: 145 ALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLE 204
AL KG R +ELD W ++ + HG T T+ + LR+I++YAF AS YPV+++LE
Sbjct: 200 ALCKGCRCLELDCWDGPNQEPIIY-HGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLE 258
Query: 205 DHLTPDLQAKVAEMVTQTLGEILFT-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKE 263
+H + + Q +A + LG IL P PSPE LK +I++ K L A
Sbjct: 259 NHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGG 318
Query: 264 EKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEA 323
E E + A E + + + +
Sbjct: 319 ENGSEATDVSDEVEAAEMEDEAV---------------------RSQVQHKPKEDKLKLV 357
Query: 324 PEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLR 383
PE +I GG S SE + + GN VR L R
Sbjct: 358 PELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSR 417
Query: 384 IYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRA 443
IYP G R DSSNY+P+ W+ G Q+VA N Q G + + G F+
Sbjct: 418 IYPAGWRTDSSNYSPVEMWNGGCQIVALNFQT--------------PGPEMDVYLGCFQD 463
Query: 444 NGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPP 503
NGGCGYV KP FL + P + ++ V + G P + + S
Sbjct: 464 NGGCGYVLKPAFLRDPNTTFNSRALT-QGPWWRPERLRVRIISGQ--QLPKVNKNKNSIV 520
Query: 504 DFYARVGIAGVPADTVMKKTKTLEDNWI-PSWNEEFEFPLSVPELALLRIEVHEYDMSEK 562
D V I GV DT ++T + +N P W+ EFEF ++VP+LAL+R V +YD S K
Sbjct: 521 DPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSK 580
Query: 563 DDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604
+DF GQ+ +P + LKQG R V L + G+++ S L +
Sbjct: 581 NDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISI 622
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799 | Back alignment and structure |
|---|
Score = 413 bits (1063), Expect = e-135
Identities = 152/633 (24%), Positives = 251/633 (39%), Gaps = 60/633 (9%)
Query: 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGT--MTVDHLHRFLIEVQKED-- 56
+ + F ++ P+ + +F Y MT +HL +F+ + Q++
Sbjct: 196 DAINPEDFPEPVYKSFLMSLCPRPE-IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRL 254
Query: 57 ------KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHH 109
A + Q +ID QR L+ E +L G N L+ + +HH
Sbjct: 255 NSLLFPPARPDQVQGLIDKYE--PSGINAQRGQLSPEGMVWFLCGPENSVLAQDKLLLHH 312
Query: 110 DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL 169
DMT P++HYFI + HN+YLT Q + S + L G R +ELD W D ++
Sbjct: 313 DMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPII 372
Query: 170 -HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 227
HG TMT + + + +I E AF S YP++++ E+H+ +P QAK+AE G++L
Sbjct: 373 THGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDML 432
Query: 228 FTPGSECLK-----EFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEA 282
T E PSPE L+ +I+I K + K+ +++ +
Sbjct: 433 LTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAV 492
Query: 283 WGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIA-----IHAGKP 337
W E ++++ + G ++EE +S A ++ +P
Sbjct: 493 WAGEEGTELE-EEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQP 551
Query: 338 KGGLKECLKVDPDKVRRL-SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 396
+ ++ + S +E + + + V + +R + RIYPKG R+DSSNY
Sbjct: 552 TKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNY 611
Query: 397 NPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFL 456
P + W+ G QMVA N Q + +F NG GY+ K F+
Sbjct: 612 MPQMFWNAGCQMVALNFQT--------------MDLPMQQNMAVFEFNGQSGYLLKHEFM 657
Query: 457 LQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA 516
+ F+P + T F + Y V + G+P
Sbjct: 658 RRPDKQ---FNPFSVDRIDVVVATT------LSITVISGQFLSERSVRTYVEVELFGLPG 708
Query: 517 DTVMKKTKT---LEDNWIPSWNEE-FEF-PLSVPELALLRIEVHEYDMSEKDDFGGQTCL 571
D + ++ P W EE F F + +PELA LR+ V E + F G +
Sbjct: 709 DPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRII 764
Query: 572 PVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604
P++ L G + LH L + E
Sbjct: 765 PINALNSGYHHLCLHSESNMPLTMPALFIFLEM 797
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816 | Back alignment and structure |
|---|
Score = 413 bits (1062), Expect = e-135
Identities = 144/623 (23%), Positives = 248/623 (39%), Gaps = 80/623 (12%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKAS- 59
+ F +F++A E + ++ +F + S+N +T FL ++Q+
Sbjct: 207 AIDLKAFDFDTFFKFYLALLERSE-IEGIFKELSKNKGNITTVMFRDFLNDMQRHPSLHK 265
Query: 60 -------KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDM 111
+A+I+ + ++ L E +L + N + + +M
Sbjct: 266 TLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCEENNLTPMHRLDLGANM 325
Query: 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 171
++ Y+I + HN+YLTG+QL S + L G R +ELD W + + + HG
Sbjct: 326 KLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPI-ITHG 384
Query: 172 GTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG 231
TM V + +I E AF S+YPV+++ E+H + Q +A+ + GE+L
Sbjct: 385 FTMCTEVLFKDVVYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKP 444
Query: 232 SECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKE 286
+ P+P L+++I+I K + EE D
Sbjct: 445 IDGHPLKPGVPLPTPYDLRKKILIKNKKMHKGTGDDEELAGLTD---------------- 488
Query: 287 VPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346
++ ++ + A E L+ ++ K
Sbjct: 489 --------------EEKKKIEKEKKDAGTAAKEAEAAEEMSALVNYIQPVHFTTFEQAQK 534
Query: 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406
D S+ E Q N + D V + ++ + RIYPKG RVDSSNY P I W+ G
Sbjct: 535 KDRHYEMS-SMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGC 593
Query: 407 QMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVF 466
Q+VA N Q ++ + G+F NG GY+ KP F+ + ++ F
Sbjct: 594 QLVALNFQC--------------FDIAMCVNLGVFEYNGCSGYLLKPEFMRKL---DKRF 636
Query: 467 DPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMK--KTK 524
DP + + T+ + F + Y V + G+P DTV K KTK
Sbjct: 637 DPFTESTVDGVVAGTIEI------KIISAQFLSDKQISSYVEVEMYGLPTDTVRKKFKTK 690
Query: 525 TLEDNWI-PSWNEEFEF--PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 581
+E+N + P ++E+ + +P+LA++RI V E + F G +P+ +K G R
Sbjct: 691 IIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN----GKFIGHRVMPLDGIKPGYR 746
Query: 582 AVPLHDRKGERYKSVKLLMHFEF 604
VPL + + H
Sbjct: 747 HVPLRNESNRPLGLASVFAHIVA 769
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885 | Back alignment and structure |
|---|
Score = 399 bits (1026), Expect = e-129
Identities = 164/672 (24%), Positives = 259/672 (38%), Gaps = 98/672 (14%)
Query: 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKAS- 59
S + RF PD K + + ++ +T++ L F+ + Q++ + +
Sbjct: 201 SIRPDEFSLEIFERFLNKLCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNE 260
Query: 60 -------KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHDM 111
A+ +I+ + +R +++E F +YL G+ N L + DM
Sbjct: 261 VLYPPLRPSQARLLIEKYEPNQQF--LERDQMSMEGFSRYLGGEENGILPLEALDLSTDM 318
Query: 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV-LH 170
T P+S YFI + HN+YLT QL S +AL G R +ELD+W + H
Sbjct: 319 TQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITH 378
Query: 171 GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFT 229
G TMT V L L +I E AF S YPV+++ E+H+ + QAK+AE G+ L
Sbjct: 379 GFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLI 438
Query: 230 PGSECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWG 284
+ PSP+ L RI++ K + SA E+
Sbjct: 439 EPLDKYPLAPGVPLPSPQDLMGRILVKNKKRHRPSAGGPDSAGRKRPLEQSNSALSESSA 498
Query: 285 KEVPNLKSLNNSACD-------------------------------------KDDFDGGV 307
P+ L + + D D +
Sbjct: 499 ATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQKSLGDEGLNRGPYVLGPADREDEE 558
Query: 308 DNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL-----------KECLKVDPDKVRRLS 356
+++EE+ + E ++A + L E + S
Sbjct: 559 EDEEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSS 618
Query: 357 LSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEI 416
E + + + V + ++ L RIYPKG RVDSSNY P + W+ G Q+VA N Q
Sbjct: 619 FVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQT- 677
Query: 417 EEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKK 476
++ L G+F NG GY+ KP F+ + FDP ++
Sbjct: 678 -------------LDVAMQLNAGVFEYNGRSGYLLKPEFMRRPDKS---FDPFTEVIVDG 721
Query: 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMK-KTKTLEDN-WIPSW 534
+ F + Y V + G+P DT K +T+T + N + P W
Sbjct: 722 IVANA------LRVKVISGQFLSDRKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVW 775
Query: 535 NEE-FEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 592
+EE F+FP + +P LA LRI E F G LPVS ++ G V L + +
Sbjct: 776 DEEPFDFPKVVLPTLASLRIAAFEEG----GKFVGHRILPVSAIRSGYHYVCLRNEANQP 831
Query: 593 YKSVKLLMHFEF 604
LL++ E
Sbjct: 832 LCLPALLIYTEA 843
|
| >3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A Length = 339 | Back alignment and structure |
|---|
Score = 88.8 bits (219), Expect = 2e-19
Identities = 36/227 (15%), Positives = 64/227 (28%), Gaps = 49/227 (21%)
Query: 98 NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI 157
+ L P HN+Y AL G ++ELD+
Sbjct: 11 SSGLVPRGSHMEPAATTYGTSTSVGVHNAY-------EKEKYRYFADALDSGAALLELDL 63
Query: 158 WPNSKKDNVDVLHG------------------GTMTAPVELIKCLRSIKEY-AFVASEYP 198
W N+ + V H T + + CL ++ + P
Sbjct: 64 WSNALGRSWRVSHSNPLGNNSNCEGAANASELRTKSRDQDFAGCLSDMRAWHDAHPGHRP 123
Query: 199 VVITLE--DHLTPDLQAKVAE---MVTQTLGEILFTPGSECLKE-----------FPSPE 242
+++ +E D AE ++ Q LG+ ++ PG +PS
Sbjct: 124 ILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATADEAVRAGGWPSRA 183
Query: 243 SLKRRII-------ISTKPPKEYLEAKEEKEKENDSQRGKGSADEEA 282
L + + + K P + L E +G +
Sbjct: 184 DLAGKFLFELIPGTVEEKNPFDKLWTDVEYAGHLKDLAAQGKLAQST 230
|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Length = 126 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 7e-12
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557
D PD Y + I+ P K+T+ ++ P WNE FEF L + +L I + +
Sbjct: 22 DMLDTPDPYVELFISTTPDSR--KRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 79
Query: 558 DMSEKDDFGGQTCLPVSELKQG 579
+ D+ G VS +K G
Sbjct: 80 NYV-MDETLGTATFTVSSMKVG 100
|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Length = 133 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 1e-11
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 580
+T T+ N P WN+ F FP+ +L + V + D + DF G+ +P+ ++ G
Sbjct: 47 LQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ 105
Query: 581 -RAVPLHDRKGERYKSVKLLMHFEFI 605
L ++ E+ + + + I
Sbjct: 106 PNCYVLKNKDLEQAFKGVIYLEMDLI 131
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.1 bits (155), Expect = 8e-11
Identities = 96/651 (14%), Positives = 197/651 (30%), Gaps = 193/651 (29%)
Query: 36 ENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLR------ELKH-------------- 75
E G + ++ ++ V ++ D + + D + E+ H
Sbjct: 10 ETGEH--QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 76 LNIFQRRGLNL-EAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIY-TGHNSYLTGNQL 133
+ + + F + + IN +P + + P +Y + NQ+
Sbjct: 68 FWTLLSKQEEMVQKFVEEVL-RINYKFLMSP-IKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 134 NSDCSDVPIIR---ALQKGVRVIELDIWPNSKKDNVDVLHG--G----TMTAPVELIKCL 184
+ +V ++ L++ + EL P NV ++ G G + V
Sbjct: 126 FAK-YNVSRLQPYLKLRQALL--ELR--PA---KNV-LIDGVLGSGKTWVALDV-----C 171
Query: 185 RSIK-EYAFVASEYPVV-ITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242
S K + ++ + + L++ +P+ V EM+ Q L + P+
Sbjct: 172 LSYKVQCKM---DFKIFWLNLKNCNSPET---VLEML-QKL----------LYQIDPNWT 214
Query: 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS---ADEEAWGKEVPNLKSLNNSAC- 298
S S+ + E + S+ + + + N S C
Sbjct: 215 SRSDH---SSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-NVQNAKA--WNAFNLS-CK 267
Query: 299 ------DKDDFD--GGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL-KECLKVDP 349
K D D S E + L+ + L +E L +P
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP 327
Query: 350 DKVRRLSLSEQQLENAVGTYGN----------DIVRFTQRNL-----------LRIYPKG 388
RRLS+ + + + + T+ N I+ + L L ++P
Sbjct: 328 ---RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS 384
Query: 389 IRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCG 448
+ + + + W F++ + + + VN L H SL
Sbjct: 385 AHIPTILLSLI--W--------FDVIKSDVMVVVNKL----HKYSL-------------- 416
Query: 449 YVKKPNFLLQTGPHNEVFDPKVKLPAKKTLK---VTVYMGEGWY--YDFPHTHFDAYSPP 503
V+K + + KVKL + L V Y + D + D Y
Sbjct: 417 -VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY--- 472
Query: 504 DFYARVG----IAGVPADTVMKKTKTLEDNWI--------PSWNEEFEFPLSVPELALLR 551
FY+ +G P + + L+ ++ +WN S+ L +
Sbjct: 473 -FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA----SGSILNT-LQQ 526
Query: 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 602
++ ++ + + D P ++R V ++ F
Sbjct: 527 LKFYKPYICDND--------------------PKYERL------VNAILDF 551
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 2e-04
Identities = 33/284 (11%), Positives = 81/284 (28%), Gaps = 85/284 (29%)
Query: 3 KQTYRVCFCFRRRFHVAA-----------SEAPDAV------KSMFDQYSENGTMTVDHL 45
++ + F H+ V S+ ++ + T+++ +
Sbjct: 372 RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431
Query: 46 HRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTP 105
+ ++V+ E++ + ++I+D K F L +Y + I
Sbjct: 432 Y-LELKVKLENEYALH--RSIVDHYNIPKT---FDSDDLIPPYLDQYFYSHI-------- 477
Query: 106 VVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI-WPNSKKD 164
HH R++ LD + K
Sbjct: 478 -GHHLKNIEHPERM----------------------------TLFRMVFLDFRFLEQK-- 506
Query: 165 NVDVLHGGT-MTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTL 223
+ H T A ++ L+ +K Y + ++ + E + +
Sbjct: 507 ---IRHDSTAWNASGSILNTLQQLKFY-------------KPYICDN--DPKYERLVNAI 548
Query: 224 GEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267
+ L + S + RI + + + EA ++ ++
Sbjct: 549 LDFLPKIEENLIC---SKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 140 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 3e-10
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSELK 577
KKTK +++ P WNE EF L L L I V +++ ++ G + + +L
Sbjct: 40 KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLT 99
Query: 578 QG------IRAVPLHDRKGE 591
+ + L + KG+
Sbjct: 100 GDQSRSLPYKLISLLNEKGQ 119
|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Length = 157 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 5e-10
Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 10/116 (8%)
Query: 477 TLKVTVYMGEG----WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 532
L+V + G + + D Y V + + +T T + P
Sbjct: 30 YLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD----QVRVGQTSTKQKTNKP 85
Query: 533 SWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDR 588
++NEEF V + L + V D F L EL + A +
Sbjct: 86 TYNEEFCAN--VTDGGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEG 139
|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 6e-10
Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 11/108 (10%)
Query: 477 TLKVTVYMGEG-----WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 531
LK+ + W D Y + + D+ + +T T +
Sbjct: 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD----DSRIGQTATKQKTNS 62
Query: 532 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 579
P+W++EF V + + V DDF + EL Q
Sbjct: 63 PAWHDEFVTD--VCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQN 108
|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Length = 153 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 8e-09
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 506 YARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDD 564
Y RV + + +TKT++ + P WNEE F + P+ L EV + + +DD
Sbjct: 44 YVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH-PQQHRLLFEVFDENRLTRDD 102
Query: 565 FGGQTCLPVSELKQG 579
F GQ +P+ L
Sbjct: 103 FLGQVDVPLYPLPTE 117
|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Length = 173 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 9e-09
Identities = 21/111 (18%), Positives = 34/111 (30%), Gaps = 13/111 (11%)
Query: 466 FDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKT 525
L K L++TV + + P Y V + G KKT+
Sbjct: 26 LGSMGSLTMKSQLQITVISAKLKENK------KNWFGPSPYVEVTVDGQS-----KKTEK 74
Query: 526 LEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL 576
+ P W + V ++ L V + + D G L + E
Sbjct: 75 CNNTNSPKWKQPLTVI--VTPVSKLHFRVWSHQTLKSDVLLGTAALDIYET 123
|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Length = 176 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-08
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 506 YARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDD 564
Y RV + + + +TKT++ + P WNEE F + P+ + EV + + +DD
Sbjct: 32 YVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL-PQRHRILFEVFDENRLTRDD 90
Query: 565 FGGQTCLPVSELKQG 579
F GQ +P+ L
Sbjct: 91 FLGQVDVPLYPLPTE 105
|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Length = 136 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-08
Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 14/129 (10%)
Query: 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 536
TL+V + + F P Y ++ + + + P WNE
Sbjct: 11 TLEVVLVSAK----GLEDADFLNNMDP--YVQLTCRTQDQKSNVAEGMGTT----PEWNE 60
Query: 537 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL--KQGIRAVPLHDRKGERYK 594
F F +S L+ ++ + D+ +DD G+ +P+ + + I + K E YK
Sbjct: 61 TFIFTVSEGT-TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYK 119
Query: 595 -SVKLLMHF 602
+ + + F
Sbjct: 120 GEIWVALSF 128
|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 Length = 149 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 6e-08
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHEYDMSEKDDFGGQTCLPVSELK 577
+KTKT++ + P WNE F F L + L +E+ ++D++ ++DF G +SEL+
Sbjct: 70 QKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQ 127
|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 147 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 6e-08
Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 5/107 (4%)
Query: 473 PAKKTLKVTVYMGEG-WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 531
L V V + + Y ++ + +P K+T
Sbjct: 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICL--LPDQKNSKQTGVKRKTQK 80
Query: 532 PSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 576
P + E + F + E L + V ++D + G+ +P+ E+
Sbjct: 81 PVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEV 127
|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* Length = 143 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 7e-08
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 576
+TK P +NE+F F + EL L + V+++D K D G+ +P++ +
Sbjct: 71 FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 128
|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-08
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 576
+T + +W E PL+ EL L + + D + G+ L +
Sbjct: 61 AQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGT 118
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 1e-07
Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
Query: 472 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 531
LP L VT+ + D D Y + + +KT ++
Sbjct: 148 LPTAGLLTVTIIKAS----NLKAM--DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLN 201
Query: 532 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSEL 576
P++NE F ++ + L I V +YD ++ G +
Sbjct: 202 PTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAA 248
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 5e-06
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIEVH 555
D+ D Y ++ + +P +TK P +NE F+F + + ELA L V+
Sbjct: 36 DSNGFSDPYVKIYL--LPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVY 93
Query: 556 EYDMSEKDDFGGQTCLP 572
++D + D GQ L
Sbjct: 94 DFDRFSRHDLIGQVVLD 110
|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 Length = 152 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-07
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 578
+TK P +NE+F F + EL L + V+++D K D G+ +P++ +
Sbjct: 79 FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF 138
Query: 579 G 579
G
Sbjct: 139 G 139
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 555
D D Y ++ + KKT ++ P +NE F F + ++ + + V
Sbjct: 166 DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVL 225
Query: 556 EYDMSEKDDFGGQTCLPVSELKQGIR 581
+YD K+D G+ + + +R
Sbjct: 226 DYDKIGKNDAIGKVFVGYNSTGAELR 251
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 6e-07
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 504 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSE 561
D Y +V + +P +TK P +NE+F F + ELA L + V+++D
Sbjct: 41 DPYVKVFL--LPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFS 98
Query: 562 KDDFGGQTCLPVSELKQG 579
K D G+ +P++ + G
Sbjct: 99 KHDIIGEFKVPMNTVDFG 116
|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} PDB: 3kwt_A* Length = 148 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 3e-07
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK-----------DDFGGQT 569
K+TKT+ N P W E F F +++ V + D K DDF GQT
Sbjct: 51 KRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQT 109
Query: 570 CLPVSELKQGI-RAVPLHDRKGERYKS 595
+ V L + L R + S
Sbjct: 110 IIEVRTLSGEMDVWYNLDKRTDKSAVS 136
|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 576
+KT D P ++E + + LA L+ V + ++ F G+ + +
Sbjct: 63 RKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSW 120
|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} Length = 155 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-07
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 497 FDAYSPPDFYARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIE 553
RV + T +T+ L+ + +NE F +S P L LR++
Sbjct: 58 LLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117
Query: 554 VHEYDMSEKDDFGGQTCLPVSEL 576
V D S ++ G + ++E+
Sbjct: 118 VCTTDRSHLEECLGGAQISLAEV 140
|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A Length = 166 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 6e-07
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 578
KT+ + P +NEEF + + +LA L I V +YD+ + +D+ G L +S +
Sbjct: 76 HKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGE 135
Query: 579 GIR 581
++
Sbjct: 136 RLK 138
|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} Length = 153 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELAL-LRIEV-HEYDMSEKDDFGGQTCLPVSELKQ 578
+KT+T+ D P+++E F FP+ + L + V + S + G V L
Sbjct: 65 QKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLT 124
Query: 579 GIRAV----PLHDRKGERYKSVKLLM 600
+ + L R K +K+
Sbjct: 125 PDKEISGWYYLLGEHLGRTKHLKVAR 150
|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 1e-06
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 502 PPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE 561
+ Y + + V + T+ + PSW ++F F ++ +L L +EV +
Sbjct: 22 KFNTYVTLKVQNVKSTTIAVRGSQ------PSWEQDFMFEINRLDLGLT-VEVWNKGL-I 73
Query: 562 KDDFGGQTCLPVSELKQ 578
D G +P+ ++Q
Sbjct: 74 WDTMVGTVWIPLRTIRQ 90
|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A Length = 153 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 498 DAYSPPDFYARVGIAGVPADTVM--KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIE 553
D D Y +V + A + KKT + +NE F F + L +
Sbjct: 46 DVSGLSDPYVKVNL--YHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 103
Query: 554 VHEYDMSEKDDFGGQTCLPVSELKQGIR 581
V + + +++ G+ L + G
Sbjct: 104 VLDSERGSRNEVIGRLVLGATAEGSGGG 131
|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 141 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-06
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSEL 576
+TK N P WNE F F E + L ++V +YD ++D G+ +P++++
Sbjct: 63 LETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKV 121
|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A Length = 132 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-06
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 503 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK 562
PD +A++ + G T T+++ P WN+ ++ V + + I V + K
Sbjct: 26 PDPFAKIVVDG---SGQCHSTDTVKNTLDPKWNQHYDLY--VGKTDSITISVWNHKKIHK 80
Query: 563 DD---FGGQTCLPVSELKQG 579
F G L + + +
Sbjct: 81 KQGAGFLGCVRLLSNAISRL 100
|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} Length = 171 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 18/76 (23%), Positives = 27/76 (35%)
Query: 501 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS 560
S P Y +V + A KKT+ P + + F S L I +Y
Sbjct: 50 STPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRM 109
Query: 561 EKDDFGGQTCLPVSEL 576
+ F G + + EL
Sbjct: 110 DHKCFMGVAQILLEEL 125
|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} Length = 138 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-06
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 578
KKT T + N P +NE F F + +L + I V + D ++D G+ L
Sbjct: 55 KKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPG 114
Query: 579 GIR 581
++
Sbjct: 115 EVK 117
|
| >1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A Length = 749 | Back alignment and structure |
|---|
Score = 49.6 bits (117), Expect = 3e-06
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557
D PD Y + I+ P K+T+ ++ P WNE FEF L + +L I + +
Sbjct: 37 DMLDTPDPYVELFISTTPDSR--KRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94
Query: 558 DMSEKDDFGGQTCLPVSELK 577
+ D+ G VS +K
Sbjct: 95 NY-VMDETLGTATFTVSSMK 113
|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-06
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 521 KKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELK 577
KT+ L P+++E F F + ++ L + +D +DD G+ +P+S ++
Sbjct: 60 VKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIE 119
|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A Length = 142 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-06
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 521 KKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 576
+TKTL + P WNE ++ ++ ++ LRI V + D ++F G+T + +L
Sbjct: 68 LRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKL 126
|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* Length = 159 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 7e-06
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 497 FDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEV 554
D D Y ++ + KKT ++ P +NE F F + ++ + + V
Sbjct: 40 MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99
Query: 555 HEYDMSEKDDFGGQTCLPVSELKQGIR 581
+YD K+D G+ + + +R
Sbjct: 100 LDYDKIGKNDAIGKVFVGYNSTGAELR 126
|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 Length = 142 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 8e-06
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 503 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDM 559
P +V + + ++TK ++ + P WN+ + +S+ +L L + V +YD
Sbjct: 49 PG-RGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR 107
Query: 560 SEKDDFGGQTCLPVSELKQGIRAV---PLHDR 588
+DF G+ + +S PL ++
Sbjct: 108 FSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139
|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 142 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 1e-05
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDD--FGGQTCLPVSEL 576
+KT + P +++ F+F +S+PE+ L + V D G+ + ++
Sbjct: 62 RKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASE 121
|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} Length = 134 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSEL 576
+KTK P++NE + E L++ V + ++ F G LP+ +
Sbjct: 58 RKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDF 116
|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 Length = 129 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-05
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEV 554
+ P + Y ++ +D ++TKT++ P WN+ F + P+ E +L I +
Sbjct: 34 EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 93
Query: 555 HEYDM--SEKDDFGGQTCLPVSEL 576
+ E+ +F G+ + +
Sbjct: 94 WDQARVREEESEFLGEILIELETA 117
|
| >3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} Length = 540 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 3e-05
Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 521 KKTKTLEDNWIPSWNEEFEFPLSVPELA-LLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 579
+T + +N P W ++ +F + LR++V + D DD G G
Sbjct: 427 FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRS---PHSG 483
Query: 580 IRAVPLHDRKGERYKSVKL 598
V G S
Sbjct: 484 FHEVTCELNHGRVKFSYHA 502
|
| >3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} Length = 144 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 3e-05
Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 503 PDFYARVGIAGVPADTVMKKTKTLEDNWIP-SWNEEFEFPLSVPELA--LLRIEVHEYDM 559
D A+V G ++ LE+ ++E F +P++ +L I++ Y
Sbjct: 37 ADRIAKVTFRGQS-----FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91
Query: 560 SEKDDFGGQTCLPVSEL 576
+ G + + ++
Sbjct: 92 VFSNKLIGTFRMVLQKV 108
|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 141 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 5e-05
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEV 554
+ P + Y ++ +D ++TKT++ P WN+ F + P+ E +L I +
Sbjct: 37 EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 96
Query: 555 HEYDM--SEKDDFGGQTCLPVSEL 576
+ E+ +F G+ + +
Sbjct: 97 WDQARVREEESEFLGEILIELETA 120
|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 Length = 167 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 5e-05
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 504 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKD 563
+ Y + + V + T+ + PSW ++F F ++ +L L +EV + D
Sbjct: 33 NTYVTLKVQNVESTTIAVRGSQ------PSWEQDFMFEINRLDLGLT-VEVWNKGL-IWD 84
Query: 564 DFGGQTCLPVSELKQ 578
G +P+ ++Q
Sbjct: 85 TMVGTVWIPLRTIRQ 99
|
| >3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} Length = 483 | Back alignment and structure |
|---|
Score = 43.1 bits (100), Expect = 3e-04
Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 503 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYD---M 559
+Y + + + K ++ + W E FEF AL + D
Sbjct: 27 KRYYCELCLDDMLYARTTSKPRSASGDT-VFWGEHFEFNNLPAVRALRLHLYRDSDKKRK 85
Query: 560 SEKDDFGGQTCLPVSELKQG 579
+K + G +PV+ L
Sbjct: 86 KDKAGYVGLVTVPVATLAGR 105
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 605 | |||
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 100.0 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 100.0 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 100.0 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 100.0 | |
| 3h4x_A | 339 | Phosphatidylinositol-specific phospholipase C1; PI | 99.94 | |
| 2dmh_A | 140 | Myoferlin; beta-sandwich, FER-1-like protein 3, mu | 99.72 | |
| 2ep6_A | 133 | MCTP2 protein; beta sandwich, Ca2+ binding, membra | 99.69 | |
| 3b7y_A | 153 | E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- | 99.69 | |
| 3pyc_A | 132 | E3 ubiquitin-protein ligase smurf1; phospholipid b | 99.67 | |
| 1rlw_A | 126 | Phospholipase A2, CALB domain; hydrolase, C2 domai | 99.66 | |
| 3kwu_A | 148 | MUNC13-1; calcium binding protein, phospholipid bi | 99.66 | |
| 3m7f_B | 176 | E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 | 99.65 | |
| 3n5a_A | 138 | Synaptotagmin-7; calcium/phospholipid binding prot | 99.62 | |
| 2b3r_A | 134 | Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA | 99.61 | |
| 1wfj_A | 136 | Putative elicitor-responsive gene; C2 domain, rike | 99.6 | |
| 1rsy_A | 152 | Synaptotagmin I; calcium/phospholipid binding prot | 99.59 | |
| 2nq3_A | 173 | Itchy homolog E3 ubiquitin protein ligase; C2 doma | 99.59 | |
| 2cm5_A | 166 | Rabphilin-3A; protein transport, zinc-finger, Ca2+ | 99.59 | |
| 1w15_A | 153 | Synaptotagmin IV; metal binding protein, endocytos | 99.59 | |
| 2chd_A | 142 | Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium | 99.57 | |
| 2dmg_A | 142 | KIAA1228 protein; beta-sandwich, structural genomi | 99.57 | |
| 2fk9_A | 157 | Protein kinase C, ETA type; ATP-binding, metal-bin | 99.57 | |
| 3fdw_A | 148 | Synaptotagmin-like protein 4; structural genomics, | 99.57 | |
| 1v27_A | 141 | Regulating synaptic membrane exocytosis protein 2; | 99.57 | |
| 3f04_A | 143 | Synaptotagmin-1; C2A, calcium, cell junction, cyto | 99.57 | |
| 1tjx_A | 159 | Similar to synaptotagmini/P65; C2B domain, calcium | 99.56 | |
| 3rdl_A | 137 | Protein kinase C alpha type; protein kinase PKC, t | 99.56 | |
| 1a25_A | 149 | CALB, protein kinase C (beta); calcium++/phospholi | 99.56 | |
| 2z0u_A | 155 | WW domain-containing protein 1; C2 domain, alterna | 99.56 | |
| 1gmi_A | 136 | Protein kinase C, epsilon type; PKC, C2 domain, X- | 99.56 | |
| 2d8k_A | 141 | Synaptotagmin VII; exocytosis, calcium binding, ly | 99.55 | |
| 1rh8_A | 142 | Piccolo protein; beta-sandwich, metal binding prot | 99.55 | |
| 1wfm_A | 138 | Synaptotagmin XIII; C2 domain, exocytosis, neurotr | 99.55 | |
| 3fbk_A | 153 | RGS3, RGP3, regulator of G-protein signaling 3; al | 99.53 | |
| 1ugk_A | 138 | Synaptotagmin IV, KIAA1342; beta sandwich, structu | 99.53 | |
| 2bwq_A | 129 | Regulating synaptic membrane exocytosis protein 2; | 99.53 | |
| 2enp_A | 147 | B/K protein; C2 type 1,beta sandwich, structural g | 99.52 | |
| 2q3x_A | 171 | Regulating synaptic membrane exocytosis protein 1; | 99.51 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.49 | |
| 3l9b_A | 144 | Otoferlin; C2-domain, beta-sheets, cell membrane, | 99.43 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.4 | |
| 2cjt_A | 131 | UNC-13 homolog A, MUNC13-1; phorbol-ester binding, | 99.39 | |
| 2r83_A | 284 | Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel | 99.39 | |
| 3jzy_A | 510 | Intersectin 2; C2 domain, structural genomics cons | 99.37 | |
| 2cjs_A | 167 | UNC-13 homolog A, MUNC13-1; neurotransmitter trans | 99.32 | |
| 1cjy_A | 749 | CPLA2, protein (cytosolic phospholipase A2); lipid | 99.3 | |
| 1dqv_A | 296 | Synaptotagmin III; beta sandwich, calcium ION, C2 | 99.25 | |
| 3nsj_A | 540 | Perforin-1; pore forming protein, immune system; H | 99.23 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 98.96 | |
| 2plc_A | 274 | PI-PLC, phosphatidylinositol-specific phospholipas | 98.94 | |
| 3bxj_A | 483 | RAS GTPase-activating protein syngap; GTPase activ | 98.94 | |
| 3ea1_A | 298 | 1-phosphatidylinositol phosphodiesterase; phosphat | 97.39 | |
| 3v1h_A | 306 | 1-phosphatidylinositol phosphodiesterase; PI-catio | 97.36 | |
| 1yrk_A | 126 | NPKC-delta, protein kinase C, delta type; C2 domai | 97.33 | |
| 2enj_A | 138 | NPKC-theta, protein kinase C theta type; beta-sand | 97.11 | |
| 3qvq_A | 252 | Phosphodiesterase OLEI02445; structural genomics, | 96.5 | |
| 3no3_A | 238 | Glycerophosphodiester phosphodiesterase; structura | 96.44 | |
| 1vd6_A | 224 | Glycerophosphoryl diester phosphodiesterase; glyce | 96.41 | |
| 2otd_A | 247 | Glycerophosphodiester phosphodiesterase; structura | 96.17 | |
| 3ks6_A | 250 | Glycerophosphoryl diester phosphodiesterase; struc | 96.02 | |
| 1o1z_A | 234 | GDPD, glycerophosphodiester phosphodiesterase; TM1 | 95.94 | |
| 2o55_A | 258 | Putative glycerophosphodiester phosphodiesterase; | 95.91 | |
| 3i10_A | 278 | Putative glycerophosphoryl diester phosphodiester; | 95.76 | |
| 2pz0_A | 252 | Glycerophosphoryl diester phosphodiesterase; glyce | 95.66 | |
| 3ch0_A | 272 | Glycerophosphodiester phosphodiesterase; YP_677622 | 95.48 | |
| 3l12_A | 313 | Putative glycerophosphoryl diester phosphodiester; | 95.29 | |
| 3mz2_A | 292 | Glycerophosphoryl diester phosphodiesterase; struc | 95.21 | |
| 1zcc_A | 248 | Glycerophosphodiester phosphodiesterase; NYSGXRC, | 93.86 | |
| 3hhm_A | 1091 | Phosphatidylinositol-4,5-bisphosphate 3-kinase cat | 93.72 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 93.29 | |
| 2wxf_A | 940 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 92.86 | |
| 3l4c_A | 220 | Dedicator of cytokinesis protein 1; DOCK180, DOCK1 | 92.86 | |
| 1xx1_A | 285 | Smase I, sphingomyelinase I; structure, quick cryo | 92.26 | |
| 1ydy_A | 356 | Glycerophosphoryl diester phosphodiesterase; struc | 91.51 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 91.33 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 91.22 | |
| 2oog_A | 287 | Glycerophosphoryl diester phosphodiesterase; phosp | 91.2 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 91.06 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 90.5 | |
| 1e7u_A | 961 | Phosphatidylinositol 3-kinase catalytic subunit; p | 90.33 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 89.8 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 89.73 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 89.1 | |
| 2y3a_A | 1092 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 89.08 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 89.08 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 89.06 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 88.94 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 88.78 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 88.75 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 88.41 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 88.41 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 87.94 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 87.5 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 87.37 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 87.08 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 86.93 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 86.9 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 86.29 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 86.14 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 86.11 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 86.05 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 85.44 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 85.39 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 85.3 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 85.21 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 85.16 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 85.15 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 85.1 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 84.98 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 84.79 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 84.56 | |
| 1pul_A | 125 | Hypothetical protein C32E8.3 in chromosome I; alph | 84.47 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 84.16 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 84.06 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 83.73 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 83.71 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 83.7 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 83.53 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 83.48 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 83.28 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 83.23 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 83.16 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 83.08 | |
| 1a4p_A | 96 | S100A10; S100 family, EF-hand protein, ligand of a | 83.07 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 82.97 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 82.85 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 82.79 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 82.61 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 82.53 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 82.47 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 82.34 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 82.28 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 82.19 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 82.16 | |
| 3rlg_A | 302 | Sphingomyelin phosphodiesterase D lisictox-alphai; | 81.9 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 81.46 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 81.44 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 81.2 | |
| 1cb1_A | 78 | Calbindin D9K; calcium-binding protein; NMR {Sus s | 81.16 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 80.95 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 80.81 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 80.65 | |
| 1h8b_A | 75 | ACT-EF34, alpha-actinin 2, skeletal muscle isoform | 80.4 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 80.32 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 80.28 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 80.19 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 80.18 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 80.17 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 80.16 |
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-148 Score=1256.06 Aligned_cols=537 Identities=32% Similarity=0.516 Sum_probs=452.1
Q ss_pred CCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCCCCC
Q 007399 22 EAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPP 100 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~ 100 (605)
..|+||..+|+.|..+ +.|+.++|++||.++|++..++.++|.+||++|..... ....+.|++++|.+||+|..|.+
T Consensus 77 ~~~~el~~aF~~fD~~~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~--~~~dG~Is~deF~~~L~s~~~~~ 154 (624)
T 1djx_A 77 TQRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSET--AKAQRQMTKDGFLMYLLSADGNA 154 (624)
T ss_dssp TCCHHHHHHHHHHHTTSSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHH--HHHTTEECHHHHHHHHHSTTTBS
T ss_pred ccHHHHHHHHHHhcCCCCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChh--hccCCCCCHHHHHHHhcCccccc
Confidence 3578999999999866 89999999999999999976899999999999973211 11346799999999999999999
Q ss_pred CCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccch
Q 007399 101 LSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVE 179 (605)
Q Consensus 101 ~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~ 179 (605)
++| +..|+|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ ++|||||||||||+|+
T Consensus 155 ~~p~~~~v~~dm~~pLs~Yfi~SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlts~i~ 233 (624)
T 1djx_A 155 FSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKIL 233 (624)
T ss_dssp BCGGGGSCCSCTTSCGGGEEECEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGG-GCCEECCTTSCCCCEE
T ss_pred cCcccccccccccCcchhheeecccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEecCCccccccc
Confidence 988 46899999999999999999999999999999999999999999999999999999986 5799999999999999
Q ss_pred HHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCch
Q 007399 180 LIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEY 258 (605)
Q Consensus 180 f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~ 258 (605)
|+|||+||++|||++|+||||||||||||++||++||+||++||||+|++++.+ ....||||++||||||||+|+++..
T Consensus 234 f~~v~~~I~~~AF~~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd~L~~~~~~~~~~~lpsp~~Lk~kilik~k~~~~~ 313 (624)
T 1djx_A 234 FCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGL 313 (624)
T ss_dssp HHHHHHHHHHHTTTSCSSCEEEEEEEECCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSCCCTTTTTTCEEEEECCC---
T ss_pred HHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCccCCcCCCCCHHHHCCCEEEEecCCCcc
Confidence 999999999999999999999999999999999999999999999999997744 4689999999999999999998654
Q ss_pred hhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCC-CCccccccccccchhhhcceeeecccc
Q 007399 259 LEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDND-EEDSDDKSQHNEAPEYRKLIAIHAGKP 337 (605)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 337 (605)
.+..... +. ++ + +.. ++++.++.+..+... .....++.+.+++++|++|+.|+.+++
T Consensus 314 ~~~~~~~----~~-------~~---~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ls~l~~y~~~~~ 371 (624)
T 1djx_A 314 LPAGGEN----GS-------EA---T-DVS-------DEVEAAEMEDEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSVH 371 (624)
T ss_dssp ---------------------------------------------------------------CCCHHHHTTEEEEEEEC
T ss_pred ccccccc----Cc-------cc---c-cCC-------cccccccccccccccccccccccccccccHHHhhhhhhhcCcc
Confidence 3221100 00 00 0 000 000000000000000 001112334678999999999999888
Q ss_pred cCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccc
Q 007399 338 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIE 417 (605)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~ 417 (605)
+.++....+.....++|+||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||++||||||||||
T Consensus 372 f~~~~~~~~~~~~~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Q--- 448 (624)
T 1djx_A 372 FGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQ--- 448 (624)
T ss_dssp CCCCCSSSSSSCCTTEEEEEEHHHHHHHHHHHHHHHHHHHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTT---
T ss_pred CCCcchhhhcCCccceEeeccHHHHHHHHHHhHHHHHHHhhhcceeeccCCccCCCCCCCchHHhhccceeeeeccc---
Confidence 88877655432115789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCC--C--CcceEEEEEEeccccccCCC
Q 007399 418 EGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL--P--AKKTLKVTVYMGEGWYYDFP 493 (605)
Q Consensus 418 ~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~--p--~~~~L~V~Visaq~L~~~~~ 493 (605)
|+|++||||+|||+.||+|||||||++||+.. ..|+|.... | ....|+|+|++|++|+.
T Consensus 449 -----------t~d~~m~ln~g~F~~ng~~GYvlKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Vi~A~~L~~--- 511 (624)
T 1djx_A 449 -----------TPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPN---TTFNSRALTQGPWWRPERLRVRIISGQQLPK--- 511 (624)
T ss_dssp -----------CCSHHHHHHHHHHHSGGGCSEEECCGGGGCTT---CCCCTTSCCSSTTCCCEEEEEEEEEEESCCC---
T ss_pred -----------CCchHHhHHHHHhhcCCCCccEECCHHHcCCC---CCcCcccccccCCccceEEEEEEEEcCCCCc---
Confidence 99999999999999999999999999999874 258886543 3 45789999999999964
Q ss_pred CCccCCCCCCCceEEEEEecCCCCcceeeccccCCC-CCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEE
Q 007399 494 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLP 572 (605)
Q Consensus 494 ~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn-~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lp 572 (605)
......+.+||||+|.+.|.+.|..++||+++++| +||+|||+|.|.+..|++++|+|.|||+|..+++++||++++|
T Consensus 512 -~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ip 590 (624)
T 1djx_A 512 -VNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIP 590 (624)
T ss_dssp -CSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEE
T ss_pred -ccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEE
Confidence 11113467899999999998888889999999998 9999999999999999999999999999988889999999999
Q ss_pred CCccCCccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 573 VSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 573 L~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.+|++||||+||+|..|+++..++|||||+|
T Consensus 591 l~~L~~G~r~v~L~d~~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 591 WNSLKQGYRHVHLLSKNGDQHPSATLFVKISI 622 (624)
T ss_dssp GGGBCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred HHHcCCCcEEEeCCCCCcCCCCceEEEEEEEE
Confidence 99999999999999999999999999999997
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-146 Score=1264.75 Aligned_cols=518 Identities=27% Similarity=0.435 Sum_probs=440.9
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhh--hhchhhhccCCCCHHH
Q 007399 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRE--LKHLNIFQRRGLNLEA 88 (605)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~--~~~~~~~~~~~l~~~g 88 (605)
++.|+||++||+.|+.+ +.||. +|++||+++|++.. ++.++|.+||++|+. ... ....+.|+++|
T Consensus 225 L~~R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~--~~~~g~Lsldg 301 (816)
T 3qr0_A 225 LLERSEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKK--GKKKGQLTKEG 301 (816)
T ss_dssp HCCCTHHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGG--GCBTTEECHHH
T ss_pred cCCHHHHHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchh--hhccCCccHHH
Confidence 46899999999999965 68999 99999999999863 689999999999984 211 11346799999
Q ss_pred HHHHHccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCce
Q 007399 89 FFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVD 167 (605)
Q Consensus 89 F~~~L~s~~n~~~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~pi 167 (605)
|++||+|+.|.++++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||
T Consensus 302 F~~yL~S~~~~~~~~~~~~v~~dm~~Pl~~YfI~sshntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~-~ePv 380 (816)
T 3qr0_A 302 LLYFLMCEENNLTPMHRLDLGANMKLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKD-GEPI 380 (816)
T ss_dssp HHHHHHSGGGCSSCHHHHSSCSCCCSCGGGEEECBBSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTT-SSCE
T ss_pred HHHHhhcccccccchhhcccccccCCchhhheecccccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCC-CCce
Confidence 999999999999987 56799999999999999999999999999999999999999999999999999999987 5799
Q ss_pred EeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChh
Q 007399 168 VLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPE 242 (605)
Q Consensus 168 v~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-----~~~lPSP~ 242 (605)
|||||||||+|+|+|||+||++|||++|+|||||||||||+++||.+||+||++||||+|++++.+. ...||||+
T Consensus 381 v~HG~Tlts~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lpsP~ 460 (816)
T 3qr0_A 381 ITHGFTMCTEVLFKDVVYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPLKPGVPLPTPY 460 (816)
T ss_dssp ECCTTSSCCCEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSTTCCCCCTT
T ss_pred EccCCcccccccHHHHHHHHHHhcccCCCCCEEEEEecCCCHHHHHHHHHHHHHHhhhhhccCCccccccccCCcCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999976432 26899999
Q ss_pred hccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 007399 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322 (605)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (605)
+||||||||+|+++......+ .....+++. ...... ........+...++
T Consensus 461 ~Lk~kIlik~K~~~~~~~~~~----------~~~~~~~~~----~~~~~~----------------~~~~~~~~~~~~~i 510 (816)
T 3qr0_A 461 DLRKKILIKNKKMHKGTGDDE----------ELAGLTDEE----KKKIEK----------------EKKDAGTAAKEAEA 510 (816)
T ss_dssp TTTTCEEEECCCCC--------------------CCCHHH----HHHHHH----------------HHHHHGGGGSCCCC
T ss_pred HHcCCEEEEeCCCCCcCCCcc----------cccccccch----hhcccc----------------cccccccccchhhh
Confidence 999999999999753110000 000000000 000000 00000011223468
Q ss_pred chhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccc
Q 007399 323 APEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGW 402 (605)
Q Consensus 323 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W 402 (605)
+++|++|++|+.+..+.++.......+ .++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||
T Consensus 511 ~~eLs~Lv~y~~~v~f~~f~~~~~~~~-~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W 589 (816)
T 3qr0_A 511 AEEMSALVNYIQPVHFTTFEQAQKKDR-HYEMSSMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYW 589 (816)
T ss_dssp CHHHHTTCSSSEECCCCCHHHHHHHTC-TTEEEEEEHHHHHHHHHHCHHHHHHHTTTSCEEEECCTTCTTCCCCCTHHHH
T ss_pred HHHHHHHHhhhCCcCCCCcccchhcCC-cceEecccHHHHHHHHHhhhHHHHHhhhcccceeCCCccccCCCCCCchhhc
Confidence 899999999988776666665433322 4568999999999999999999999999999999999999999999999999
Q ss_pred cccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCC----CcceE
Q 007399 403 SHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLP----AKKTL 478 (605)
Q Consensus 403 ~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p----~~~~L 478 (605)
++|||||||||| |+|++||||+|||+.||+|||||||++||+.. ..|||....+ .+.+|
T Consensus 590 ~~G~QmVALN~Q--------------T~d~~m~LN~g~F~~nG~cGYVLKP~~lr~~~---~~f~p~~~~~~~~~~~~~L 652 (816)
T 3qr0_A 590 NAGCQLVALNFQ--------------CFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLD---KRFDPFTESTVDGVVAGTI 652 (816)
T ss_dssp TTTCSEECBCTT--------------CCSHHHHHHHHHTTTTTTCSEEECCHHHHCTT---CCCCTTCCSCCTTSCCEEE
T ss_pred ccCceEEeecCc--------------CCChhhhhhhhhhccCCceeeeecChHhcCCC---cccCCCCCCCcCCccceEE
Confidence 999999999999 99999999999999999999999999999863 4799975433 24679
Q ss_pred EEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCc--ceeeccccCCC-CCCeeccE-EEEe-eecCCccEEEEE
Q 007399 479 KVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT--VMKKTKTLEDN-WIPSWNEE-FEFP-LSVPELALLRIE 553 (605)
Q Consensus 479 ~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~--~k~kTkvv~nn-~NPvWNEt-f~F~-v~~pela~Lrf~ 553 (605)
+|+|++|++|+. ..+||||+|++.|.|.|. .++||+++++| +||+|||+ |.|. |..|++++|+|.
T Consensus 653 ~V~Visaq~L~~----------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~ 722 (816)
T 3qr0_A 653 EIKIISAQFLSD----------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRII 722 (816)
T ss_dssp EEEEEEEECCCS----------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEE
T ss_pred EEEEEEcccCCC----------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEE
Confidence 999999999852 137999999999988887 67799999876 99999998 9998 889999999999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|||++ ++|+|++++||++|++|||||||+|..|+++..|+|||||.+
T Consensus 723 V~D~d----ddfiG~~~ipL~~L~~GyR~vpL~~~~g~~~~~atLfv~i~~ 769 (816)
T 3qr0_A 723 VSEEN----GKFIGHRVMPLDGIKPGYRHVPLRNESNRPLGLASVFAHIVA 769 (816)
T ss_dssp EEETT----SCEEEEEEEESTTCCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EEecC----CCeeeEEEEEHHHcCCcceEEEEeCCCCCCCCceEEEEEEEE
Confidence 99975 799999999999999999999999999999999999999986
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-146 Score=1264.87 Aligned_cols=547 Identities=28% Similarity=0.443 Sum_probs=427.1
Q ss_pred CCchHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHH
Q 007399 22 EAPDAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFK 91 (605)
Q Consensus 22 ~~r~ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~ 91 (605)
+.|+||.++|..|. .+ +.||.++|++||++.|++.. ++.++|.+||++|+... ...+.+.|++++|.+
T Consensus 216 ~~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~--~~~~dg~is~eeF~~ 293 (799)
T 2zkm_X 216 CPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSG--INAQRGQLSPEGMVW 293 (799)
T ss_dssp SCCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC----------CCHHHHHH
T ss_pred cCHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhccc--ccccCCccchhhhhh
Confidence 46899999999995 34 89999999999999999863 67889999999997321 112457899999999
Q ss_pred HHccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCC--CCCCceE
Q 007399 92 YLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS--KKDNVDV 168 (605)
Q Consensus 92 ~L~s~~n~~~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~--~~~~piv 168 (605)
||+|+.|.+++| +..|+|||++|||||||||||||||+||||.|+||+|||++||++||||||||||||+ + ++|||
T Consensus 294 ~L~S~~n~~~~~~~~~v~~dm~~PLshYfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~-~ep~v 372 (799)
T 2zkm_X 294 FLCGPENSVLAQDKLLLHHDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPD-EEPII 372 (799)
T ss_dssp HHHSTTSCSBCGGGGSSCSCCCSCGGGEEECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTC-CSCEE
T ss_pred cccCccccccchhhcccccccCCchhhheEeccccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCC-CCCEE
Confidence 999999999987 5689999999999999999999999999999999999999999999999999999997 4 57999
Q ss_pred eeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChh
Q 007399 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPE 242 (605)
Q Consensus 169 ~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-----~~~lPSP~ 242 (605)
||||||||+|+|+|||+||++|||++|+||||||||||| |++||++||+||++||||+|++++.+. ...||||+
T Consensus 373 ~HG~Tlts~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lPSP~ 452 (799)
T 2zkm_X 373 THGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPE 452 (799)
T ss_dssp CCTTSSCCCEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGGGBCCSCCTTSCSSTTCCCCCTT
T ss_pred EeCCcccccccHHHHHHHHHHhcccCCCCCEEEEccccCCCHHHHHHHHHHHHHHhhhheecCCccccccccCCCCCCHH
Confidence 999999999999999999999999999999999999999 999999999999999999999977542 36899999
Q ss_pred hccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCC-------Cccc
Q 007399 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDE-------EDSD 315 (605)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 315 (605)
+||||||||+|+++...+....+....++......+.+..|+.+...-... ..++++++.+..+.++. .+..
T Consensus 453 ~Lk~kIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (799)
T 2zkm_X 453 DLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAVWAGEEGTELEE-EEVEEEEEEESGNLDEEEIKKMQSDEGT 531 (799)
T ss_dssp TTTTCEEEECCCC---------------------------------------------------CCSHHHHHHHHHTTGG
T ss_pred HHCCCEEEEecCCCcccccccccccccccccccccCccccccCcccccccc-ccccccccccccccchhhhhcccccccc
Confidence 999999999999865322111000000000000001111222111100000 00000000000000000 0001
Q ss_pred cccccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCC
Q 007399 316 DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSN 395 (605)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN 395 (605)
.+....++++|++|+.|+.+..+.++....+.. ..++|+||||+++.+++++++.+|++||++||+||||+|+||||||
T Consensus 532 ~~~~~~~~~els~Lv~y~~~~~f~~~~~~~~~~-~~~~~~S~sE~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~~SSN 610 (799)
T 2zkm_X 532 AGLEVTAYEEMSSLVNYIQPTKFVSFEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSN 610 (799)
T ss_dssp GGGCCCCCHHHHTTCSSCEECCCCCHHHHHHHT-CTTEEEEEEHHHHHHHHHHSHHHHHHHHHHSEEEEECCTTCTTCCC
T ss_pred cccccchhhhhcceeEEecCcCCCchhhhhhcC-CccceecCCHHHHHHHHHHCHHHHHHHhhhcceeeccCCCcCCCCC
Confidence 112345789999999988776666776655433 2457899999999999999999999999999999999999999999
Q ss_pred CCccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCC---
Q 007399 396 YNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL--- 472 (605)
Q Consensus 396 ~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~--- 472 (605)
|||++||++|||||||||| |+|++||||+|||+.||+|||||||++||+.. ..|||....
T Consensus 611 ~~P~~~W~~G~QmVAlN~Q--------------t~d~~m~ln~g~F~~nG~cGYVlKP~~lr~~~---~~f~p~~~~~~~ 673 (799)
T 2zkm_X 611 YMPQMFWNAGCQMVALNFQ--------------TMDLPMQQNMAVFEFNGQSGYLLKHEFMRRPD---KQFNPFSVDRID 673 (799)
T ss_dssp CCSHHHHHTTCSEECBCTT--------------CCSHHHHHHHHHTTTGGGCSEEECCGGGTCTT---SCCCTTSCCTTT
T ss_pred CCcHHHHhccceEeeeccc--------------cCchHHHHHHhhhhccCCCCceECCHHHhCCC---ccCCCccccccc
Confidence 9999999999999999999 99999999999999999999999999999763 368987532
Q ss_pred -CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcc-eeecc-ccCCC-CCCeecc-EEEE-eeecCC
Q 007399 473 -PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTK-TLEDN-WIPSWNE-EFEF-PLSVPE 546 (605)
Q Consensus 473 -p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~-k~kTk-vv~nn-~NPvWNE-tf~F-~v~~pe 546 (605)
.+..+|+|+|++|++|+. ..+||||+|++.|.|.|.. ++||+ ++++| +||+||| +|.| .|..|+
T Consensus 674 ~~~~~~L~V~Visa~~L~~----------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e 743 (799)
T 2zkm_X 674 VVVATTLSITVISGQFLSE----------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPE 743 (799)
T ss_dssp TTTCEEEEEEEEEEESCCS----------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGG
T ss_pred ceeeeeEEEEEEeccccCc----------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCC
Confidence 245789999999999852 2479999999999888764 67999 88765 9999999 6999 899999
Q ss_pred ccEEEEEEEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 547 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 547 la~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
+++|+|.|+|+| ++++|++++||++|++|||||||+|..|+++.+++|||||++
T Consensus 744 l~~Lr~~V~D~d----~d~iG~~~ipl~~L~~G~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 744 LASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp GCEEEEEEEETT----TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred ccEEEEEEEEeC----CCccceEeeehhhcCCCcEEEeccCCCCCCCCceEEEEEEEE
Confidence 999999999986 789999999999999999999999999999999999999987
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-144 Score=1252.92 Aligned_cols=550 Identities=29% Similarity=0.451 Sum_probs=440.1
Q ss_pred CCCchHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCC--------CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHH
Q 007399 21 SEAPDAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKED--------KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFF 90 (605)
Q Consensus 21 ~~~r~ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~--------~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~ 90 (605)
++.|+||++||+.|. .+ +.||.++|++||+++|++. .++.++|.+||++|+... ....++.|+++||+
T Consensus 219 l~~R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~--~~~~~g~LsldgF~ 296 (885)
T 3ohm_B 219 LCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQ--QFLERDQMSMEGFS 296 (885)
T ss_dssp HSCCHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCH--HHHHTTEECHHHHH
T ss_pred cCCHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCCh--hhhccCccchhhhh
Confidence 467999999999995 44 8999999999999999985 368899999999998431 12245689999999
Q ss_pred HHHccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCC-CCCCceE
Q 007399 91 KYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDV 168 (605)
Q Consensus 91 ~~L~s~~n~~~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv 168 (605)
+||+|+.|.++++ +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +.++|+|
T Consensus 297 ~yL~S~~~~~~~~~~~~v~~dm~~Pls~YfI~ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v 376 (885)
T 3ohm_B 297 RYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFI 376 (885)
T ss_dssp HHHTSTTSCSSCHHHHSSCSCCCSCGGGEEECCBSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEE
T ss_pred hhccCcccCccCccccccccccCcchhhheeeccccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEE
Confidence 9999999999987 5679999999999999999999999999999999999999999999999999999993 2358999
Q ss_pred eeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChh
Q 007399 169 LHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPE 242 (605)
Q Consensus 169 ~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-----~~~lPSP~ 242 (605)
|||||||++|+|+|||+||++|||++|+||||||||||| +++||.+||+||++||||+|++++.+. ...||||+
T Consensus 377 ~hg~t~t~~i~f~~v~~~i~~~af~~s~yPvilsle~h~~~~~qq~~~a~~~~~~~g~~L~~~~~~~~~~~~~~~lpsp~ 456 (885)
T 3ohm_B 377 THGFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIEPLDKYPLAPGVPLPSPQ 456 (885)
T ss_dssp CSTTSEECCEEHHHHHHHHHHHTTSSCCSCEEEEEEEECCCTTHHHHHHHHHHHHHGGGBCCSCBTTBCSSSSCCCCCTT
T ss_pred eeCCcccCcccHHHHHHHHHHhhccCCCCCEEEEEecCCCCHHHHHHHHHHHHHHhhHhhccCcccccccccCCcCCCHH
Confidence 999999999999999999999999999999999999999 799999999999999999999976432 35899999
Q ss_pred hccCcEEEecCCCCchhhhh---hhhhh----------cccccC-------CCCCCccc-cc--CCCCCC------cccc
Q 007399 243 SLKRRIIISTKPPKEYLEAK---EEKEK----------ENDSQR-------GKGSADEE-AW--GKEVPN------LKSL 293 (605)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~---~~~~~----------~~~~~~-------~~~~~~~~-~~--~~~~~~------~~~~ 293 (605)
+||||||||+|+++...... ..+.+ +..+.. +..++.+. .+ |.+... ....
T Consensus 457 ~Lk~kilik~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (885)
T 3ohm_B 457 DLMGRILVKNKKRHRPSAGGPDSAGRKRPLEQSNSALSESSAATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQKS 536 (885)
T ss_dssp TTTTCEEEECCCCC------------------------------------------------------------------
T ss_pred HHcCcEEEEecCCCccccccccccccccccccccccccccccccccCccccccccccccccccccccccccccccccccc
Confidence 99999999999986421000 00000 000000 00000000 00 000000 0000
Q ss_pred ------------CCCCC-CCCCCCCCCCCCCC-------ccccccccccchhhhcceeeecccccCCcccccccCCCcee
Q 007399 294 ------------NNSAC-DKDDFDGGVDNDEE-------DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVR 353 (605)
Q Consensus 294 ------------~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 353 (605)
..+.+ ++++.+..++++.. ....+...+++++|++|+.|+.+..+.+|...... ...++
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~eLS~LvvY~~~vkf~~f~~~~~~-~~~~~ 615 (885)
T 3ohm_B 537 LGDEGLNRGPYVLGPADREDEEEDEEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKR-NKCFE 615 (885)
T ss_dssp -------------------------------------CTTGGGTTCCCCCHHHHTTCSSCEECCCCCHHHHHHH-TCTTE
T ss_pred ccccccccccccccccccccccccccccchhhhhccccccccccccchhhHHHHhHHhhhcCccCCCccccccc-CCcce
Confidence 00000 00000000000000 00111234578999999998887776666543322 23578
Q ss_pred eeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccccCCCCCcc
Q 007399 354 RLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRS 433 (605)
Q Consensus 354 ~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~ 433 (605)
|+||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||| |+|++
T Consensus 616 ~~S~sE~k~~~~~~~~~~~~~~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVALN~Q--------------T~d~~ 681 (885)
T 3ohm_B 616 MSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQ--------------TLDVA 681 (885)
T ss_dssp EEEEEHHHHHHHHHHSHHHHHHHHHHSCEEEECCTTCTTCCCCCTHHHHTTTCSEECBCTT--------------CCSHH
T ss_pred ECCccHHHHHHHHHhCHHHHHHHhhccceeeccCccccCCCCCCchhhcccCceeeeecCC--------------CCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred eeecccccccCCceeeeecCCcccCCCCCCCccCCCCCC----CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEE
Q 007399 434 LWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARV 509 (605)
Q Consensus 434 m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~----p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V 509 (605)
||||+|||+.||+|||||||++||+.. ..|||.... +.+.+|+|+|++|++|+. ..+||||+|
T Consensus 682 m~lN~g~F~~nG~cGYVLKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~----------~~~DPYV~V 748 (885)
T 3ohm_B 682 MQLNAGVFEYNGRSGYLLKPEFMRRPD---KSFDPFTEVIVDGIVANALRVKVISGQFLSD----------RKVGIYVEV 748 (885)
T ss_dssp HHHHHHHHTTGGGCSEEECCGGGTCTT---CCCCTTCSSCCTTCCCEEEEEEEEEEESCCS----------SCCCEEEEE
T ss_pred cchhhhhhccCCceeeeecCHHHcCCC---cCcCCCcCcccCcccceEEEEEEEEeccCcc----------cCCCcEEEE
Confidence 999999999999999999999999863 369986532 345689999999999952 137999999
Q ss_pred EEecCCCCcc-eeeccccCCC-CCCeecc-EEEEe-eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCccEEEEc
Q 007399 510 GIAGVPADTV-MKKTKTLEDN-WIPSWNE-EFEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPL 585 (605)
Q Consensus 510 ~i~G~p~D~~-k~kTkvv~nn-~NPvWNE-tf~F~-v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL 585 (605)
++.|.|.|.. ++||+++.+| +||+||| +|.|. |..|++++|+|.|||+| ++|||++++||++|++|||||||
T Consensus 749 ~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d----ddfiG~~~lpL~~L~~GyR~vpL 824 (885)
T 3ohm_B 749 DMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG----GKFVGHRILPVSAIRSGYHYVCL 824 (885)
T ss_dssp EEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT----TEEEEEEEEETTTCCCEEEEEEE
T ss_pred EEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC----ccEEeeEEEEHHHcCCCceEEEe
Confidence 9999888865 5799999876 9999999 69998 88999999999999987 78999999999999999999999
Q ss_pred cCCCCCcccCeEEEEEEEE
Q 007399 586 HDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 586 ~d~~g~~l~~atLlv~i~f 604 (605)
+|..|+++..|+|||||++
T Consensus 825 ~~~~g~~l~~atLfv~i~~ 843 (885)
T 3ohm_B 825 RNEANQPLCLPALLIYTEA 843 (885)
T ss_dssp ECTTSCEEEEEEEEEEEEE
T ss_pred cCCCCCccCceEEEEEEEE
Confidence 9999999999999999986
|
| >3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.9e-28 Score=245.43 Aligned_cols=138 Identities=19% Similarity=0.363 Sum_probs=119.7
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc-------------
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM------------- 174 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl------------- 174 (605)
...+++||+||+|..+||||++|+ ...+++||.+|||+||||||+++.++...|+||.++
T Consensus 21 ~~~~~~pls~~T~~g~HNSY~~g~-------~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~~nnC~~as~~~ 93 (339)
T 3h4x_A 21 MEPAATTYGTSTSVGVHNAYEKEK-------YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGNNSNCEGAANAS 93 (339)
T ss_dssp ----CCBTTSEEEEEETTTTCTTT-------CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSCCSSCCCCSSGG
T ss_pred CCcccCccccceEeeccccccccC-------cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccccccccccccccc
Confidence 357899999999999999999997 357799999999999999999876678999999875
Q ss_pred -----cccchHHHHHHHHhhhh-hccCCCceEEEeccCCCHHHH-----HHHHHHHHHHhhccccCCCC-----CCC---
Q 007399 175 -----TAPVELIKCLRSIKEYA-FVASEYPVVITLEDHLTPDLQ-----AKVAEMVTQTLGEILFTPGS-----ECL--- 235 (605)
Q Consensus 175 -----ts~i~f~dvi~aI~~~A-F~~S~yPvIlSlE~Hc~~~qQ-----~~ma~~~~~i~Gd~L~~~~~-----~~~--- 235 (605)
|+.++|.+||+.||+++ |..++|||||.||.|++...| .+++++++++||++||+|.. +.+
T Consensus 94 dL~t~Tt~~tL~~CL~~IK~WsdahPsh~PViI~LE~K~t~~~~~g~~p~~lDaeI~~vFGd~L~tPddvrG~~~TL~eA 173 (339)
T 3h4x_A 94 ELRTKSRDQDFAGCLSDMRAWHDAHPGHRPILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATADEA 173 (339)
T ss_dssp GTTCSCCCCCHHHHHHHHHHHHHHSTTCCCEEEEEEETTCCBGGGTBSHHHHHHHHHHHHGGGBCCHHHHHTTSSSHHHH
T ss_pred ccccCCCCcCHHHHHHHHHHHHHhCCCCCceEEEEecccCcccccCcCHHHHHHHHHHHhccceEcchhhcccccCHHHH
Confidence 67899999999999999 889999999999999987665 88999999999999999863 222
Q ss_pred ---CCCCChhhccCcEEEec
Q 007399 236 ---KEFPSPESLKRRIIIST 252 (605)
Q Consensus 236 ---~~lPSP~~Lk~KIlik~ 252 (605)
..+|||++|||||||--
T Consensus 174 Vla~GWPSl~slRGKVlf~L 193 (339)
T 3h4x_A 174 VRAGGWPSRADLAGKFLFEL 193 (339)
T ss_dssp HHHHCCCBTGGGTTCEEEEE
T ss_pred HhcCCCCChHHhCCCEEEEE
Confidence 24999999999999864
|
| >2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.7e-17 Score=147.54 Aligned_cols=118 Identities=21% Similarity=0.283 Sum_probs=99.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC---CccEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p---ela~Lr 551 (605)
...|.|+|++|++|+. .+. +.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+ ....|+
T Consensus 6 ~g~L~v~v~~a~~L~~------~~~-g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~ 73 (140)
T 2dmh_A 6 SGMLRVIVESASNIPK------TKF-GKPDPIVSVIFKD-----EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLG 73 (140)
T ss_dssp CCEEEEEEEEEESCCC------CSS-SCCCEEEEEECSS-----CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEE
T ss_pred CcEEEEEEEEeeCCCC------CCC-CCCCeEEEEEECC-----EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEE
Confidence 4679999999999963 233 6789999999864 468999999999999999999999765 347899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc------cEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~G------yR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|.|||+|..+++++||++.++|..|..| |+++||.+..+... .++|.+++.|.
T Consensus 74 i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~-~G~l~l~~~~~ 132 (140)
T 2dmh_A 74 IIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDT-GATIDLVIGYD 132 (140)
T ss_dssp EEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEE-EEEEEEEEEEC
T ss_pred EEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCC-CCEEEEEEEEE
Confidence 9999999988899999999999999776 44567999887654 47999999874
|
| >2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=7.8e-17 Score=146.52 Aligned_cols=120 Identities=21% Similarity=0.342 Sum_probs=102.4
Q ss_pred CcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEE
Q 007399 474 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 474 ~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
....|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ ..|+|.
T Consensus 11 ~~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~-~~l~i~ 78 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVT 78 (133)
T ss_dssp CSEEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEEE
T ss_pred CceEEEEEEEeeECCCC------CCCCCCcCeEEEEEECC-----EEEEeeeecCCCCCccccEEEEEecCCC-CEEEEE
Confidence 35679999999999963 24456789999999854 4779999999999999999999997553 679999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|||+|..+++++||++.+||..+..|. +|.+|.+..++....++|.++++|+
T Consensus 79 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 79 VFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EEECCCCCCCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEE
Confidence 999998888999999999999999887 5679998887766678999999874
|
| >3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.5e-16 Score=145.46 Aligned_cols=125 Identities=26% Similarity=0.352 Sum_probs=99.2
Q ss_pred CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC--cceeeccccCCCCCCeeccEEEEeeecCCccEE
Q 007399 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 550 (605)
Q Consensus 473 p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D--~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~L 550 (605)
+....|+|+|++|++|+. .+..+.+||||+|.+.+. .+ ..++||++++++.||+|||+|.|.+..+ ...|
T Consensus 17 ~~~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l 88 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAK------KDILGASDPYVRVTLYDP-MNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRL 88 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------------CCEEEEEEEEET-TTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEE
T ss_pred CCccEEEEEEEEeeCCCC------CCCCCCCCcEEEEEEECC-CCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEE
Confidence 345789999999999963 234467899999998752 22 3567999999999999999999998765 4679
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccCCcc---------EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 551 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 551 rf~V~D~D~~~~ddflGq~~lpL~sLr~Gy---------R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
+|.|||+|..+++++||++.++|..+..+- +|.+|....+..-..++|.+.+.|+
T Consensus 89 ~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 89 LFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp EEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred EEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 999999998888999999999999986542 7899987765555568999999885
|
| >3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A | Back alignment and structure |
|---|
Probab=99.67 E-value=6.7e-16 Score=140.11 Aligned_cols=118 Identities=17% Similarity=0.293 Sum_probs=97.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|+|+|++|++|+. .+..+.+||||+|.+.+. ..++||++++++.||+|||+|.|.+..++ .|.|.||
T Consensus 5 ~~L~V~v~~a~~L~~------~d~~g~sDpyv~v~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v~ 73 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAK------KDFFRLPDPFAKIVVDGS---GQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISVW 73 (132)
T ss_dssp EEEEEEEEEEESCCC------CSTTCCCCEEEEEEETTT---CCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEEE
T ss_pred EEEEEEEEEeECCCC------CCCCCCcCeEEEEEECCC---CceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEEE
Confidence 469999999999953 345577899999998542 36789999999999999999999997765 3999999
Q ss_pred eccCCCC---CCccEEEEEECCcc----CCccEEEEccCCCC--CcccCeEEEEEEEE
Q 007399 556 EYDMSEK---DDFGGQTCLPVSEL----KQGIRAVPLHDRKG--ERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~---ddflGq~~lpL~sL----r~GyR~IpL~d~~g--~~l~~atLlv~i~f 604 (605)
|+|..++ +++||++.+|+..| ..|+++++|....+ ..-..++|.|++..
T Consensus 74 d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 74 NHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp EGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred ECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 9998765 79999999999998 78899999987643 23345789988864
|
| >1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=3.9e-16 Score=140.10 Aligned_cols=116 Identities=22% Similarity=0.369 Sum_probs=93.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|++|+. ....+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..++...|+|.||
T Consensus 3 ~~L~v~v~~a~~L~~---~~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~ 77 (126)
T 1rlw_A 3 HKFTVVVLRATKVTK---GAFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 77 (126)
T ss_dssp EEEEEEEEEEESCCS---CHHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred cEEEEEEEeeeCCCC---CCccccCCCCCCEEEEEEccCC--CceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEE
Confidence 569999999999963 0001334678999999986533 36789999999999999999999998788889999999
Q ss_pred eccCCCCCCccEEEEEECCccCCccEE---EEccCCCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGIRA---VPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~GyR~---IpL~d~~g~~l~~atLlv~i~f 604 (605)
|+|..+ +++||++.+||..|..|+++ ++|.+ .+++.++|.+
T Consensus 78 d~d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~~-------~~~g~i~~~l 121 (126)
T 1rlw_A 78 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ-------VTEMVLEMSL 121 (126)
T ss_dssp ECCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEETT-------TEEEEEEEEE
T ss_pred ECCCCC-CceeEEEEEEHHHccCCCcEEEEEEcCC-------CceEEEEEEE
Confidence 999775 89999999999999999865 56643 3456666654
|
| >3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-15 Score=141.04 Aligned_cols=118 Identities=27% Similarity=0.380 Sum_probs=99.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.+.|.|+|++|++|+. .+..+.+||||+|.+. ..+++|+++.++.||+|||+|.|.+..++ ..|+|.|
T Consensus 16 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~-----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v 83 (148)
T 3kwu_A 16 SAKISITVVCAQGLQA------KDKTGSSDPYVTVQVG-----KTKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRV 83 (148)
T ss_dssp CEEEEEEEEEEESCCC------CSTTSCCCEEEEEEET-----TEEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEE
T ss_pred ccEEEEEEEeeeCCCC------CCCCCCcCeEEEEEEC-----CEEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEE
Confidence 4679999999999963 2445778999999983 36789999999999999999999997765 6799999
Q ss_pred EeccCC-----------CCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEEEE
Q 007399 555 HEYDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~-----------~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
||+|.. +++++||++.+||..+..+. +|++|....+.....+.|.+++.|
T Consensus 84 ~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~ 145 (148)
T 3kwu_A 84 LDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISV 145 (148)
T ss_dssp EECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEE
T ss_pred EECCCCccccccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEE
Confidence 999975 67999999999999997665 578998766665566789988876
|
| >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-15 Score=144.34 Aligned_cols=124 Identities=25% Similarity=0.342 Sum_probs=97.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCCccEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+.... ..++||++++++.||+|||+|.|.+... ...|+|.
T Consensus 7 ~g~L~V~v~~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~ 79 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAK------KDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFE 79 (176)
T ss_dssp CEEEEEEEEEEESCC---------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEE
T ss_pred cEEEEEEEEEeeCCCC------cCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEE
Confidence 4679999999999963 244567899999999763221 1467999999999999999999998744 4689999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---------EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~Gy---------R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|||+|..+++++||++.+||..|..+. +|.+|....+.....+.|.|.+.|+
T Consensus 80 V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~ 140 (176)
T 3m7f_B 80 VFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 140 (176)
T ss_dssp EEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred EEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEE
Confidence 999998888999999999999997652 6889988766666678999999885
|
| >3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.62 E-value=3e-16 Score=142.78 Aligned_cols=113 Identities=20% Similarity=0.228 Sum_probs=94.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 15 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~ 88 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKA------MDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIII 88 (138)
T ss_dssp TTEEEEEEEEEESCCC------CBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEE
T ss_pred CCeEEEEEEEeeCCCC------cCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEE
Confidence 4579999999999963 244567899999999864444457899999999999999999999887765 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEE-EEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~-IpL~d~~g~~l 593 (605)
.|||+|..+++++||++.++|+++..|+++ .+|.+..|+++
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 130 (138)
T 3n5a_A 89 TVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPV 130 (138)
T ss_dssp EEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCE
T ss_pred EEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeE
Confidence 999999888899999999999999888765 47777766654
|
| >2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-15 Score=136.20 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=87.5
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCC--ccEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pe--la~Lrf 552 (605)
..|.|+|++|++|+. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|. +...+ ...|+|
T Consensus 20 ~~L~V~V~~a~~L~~-------~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~ 92 (134)
T 2b3r_A 20 GTLFIMVMHIKDLVT-------EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQL 92 (134)
T ss_dssp TEEEEEEEEEECCCC-------TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEE
T ss_pred CEEEEEEEEeeCCCC-------CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEE
Confidence 569999999999963 23467899999999754334567899999999999999999999 76543 368999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 588 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~ 588 (605)
.|||+|..+++++||++.+||..+..|. +|.+|.+.
T Consensus 93 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 93 SVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred EEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 9999998888999999999999998764 46777653
|
| >1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=2.7e-15 Score=136.48 Aligned_cols=115 Identities=23% Similarity=0.341 Sum_probs=94.7
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccC-CCCCCeeccEEEEeeecCCccEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~-nn~NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
...|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++ ++.||+|||+|.|.+.. ....|+|.
T Consensus 9 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~ 76 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAK 76 (136)
T ss_dssp EEEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEE
T ss_pred cEEEEEEEEeccCCCC------cccCCCcCceEEEEECC-----ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEE
Confidence 4679999999999963 24456789999999854 367899998 78999999999999876 45789999
Q ss_pred EEeccCCCCCCccEEEEEECCcc-CCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSEL-KQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sL-r~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|||+|..+++++||++.++|..+ ..| .+|++|. ..++ ..++|.+.+.|
T Consensus 77 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~--~~G~i~l~l~~ 128 (136)
T 1wfj_A 77 IFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE--YKGEIWVALSF 128 (136)
T ss_dssp ECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE--EEEEEEEEEEE
T ss_pred EEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc--cCEEEEEEEEE
Confidence 99999888899999999999999 555 4678888 3333 35788888877
|
| >1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=4.8e-15 Score=137.95 Aligned_cols=106 Identities=23% Similarity=0.276 Sum_probs=88.8
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|++|++|+. .+..+.+||||+|.+.+ .+..++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 41 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 112 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 112 (152)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEET--TCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred CCEEEEEEEEeECCCC------ccCCCCcCeEEEEEEEc--CCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEE
Confidence 4679999999999963 24456789999999864 33467899999999999999999999876544 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 588 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~ 588 (605)
.|||+|..+++++||++.++|..+..|. +|.+|.+.
T Consensus 113 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 113 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred EEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 9999998888999999999999998774 56788754
|
| >2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=3.6e-15 Score=142.65 Aligned_cols=118 Identities=19% Similarity=0.211 Sum_probs=94.9
Q ss_pred CcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEE
Q 007399 474 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 474 ~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
....|.|+|++|++|+. . .+. +.+||||+|.+.+ .++||+++++++||+|||+|.|.+. +...|+|.
T Consensus 34 ~~~~L~V~V~~A~~L~~---~--~~~-~~sDPYv~v~~~~-----~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~ 100 (173)
T 2nq3_A 34 MKSQLQITVISAKLKEN---K--KNW-FGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFR 100 (173)
T ss_dssp CCEEEEEEEEEEEECCC---C----C-CCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEE
T ss_pred CceEEEEEEEEeECCCC---c--ccC-CCCCeEEEEEECC-----EEeEccccCCCCCCeECCEEEEEeC--CCCEEEEE
Confidence 35679999999999962 1 122 3389999999854 6789999999999999999999884 36789999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc--------cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQG--------IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~G--------yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|||+|..+++++||++.++|..+..| ..|++|....+.....+.|.|.|++
T Consensus 101 V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~ 159 (173)
T 2nq3_A 101 VWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG 159 (173)
T ss_dssp EEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred EEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEee
Confidence 99999888899999999999998654 2478888765544456789888875
|
| >2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-15 Score=143.46 Aligned_cols=112 Identities=21% Similarity=0.278 Sum_probs=88.7
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCcc--EEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela--~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..+++. .|+|
T Consensus 36 ~~~L~V~v~~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 109 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAA------MDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDI 109 (166)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEeECCCC------ccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEE
Confidence 4579999999999963 2445678999999997644445688999999999999999999999776654 8999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccE-EEEccCCCCCc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGER 592 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR-~IpL~d~~g~~ 592 (605)
.|||+|..+++++||++.++|.++..+++ |.+|.+..+++
T Consensus 110 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~ 150 (166)
T 2cm5_A 110 SVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKK 150 (166)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCC
T ss_pred EEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCc
Confidence 99999988889999999999999865543 33555444443
|
| >1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A | Back alignment and structure |
|---|
Probab=99.59 E-value=9.8e-16 Score=142.53 Aligned_cols=113 Identities=19% Similarity=0.155 Sum_probs=88.7
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 29 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v 102 (153)
T 1w15_A 29 TNTLTVVVLKARHLPK------SDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEF 102 (153)
T ss_dssp TTEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEE
T ss_pred CCEEEEEEEEeECCCC------cCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEE
Confidence 4679999999999963 234467899999999753222346799999999999999999999987765 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEE-EEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~-IpL~d~~g~~l 593 (605)
.|||+|..+++++||++.++|.+...|+++ .+|.+..++++
T Consensus 103 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~~~~ 144 (153)
T 1w15_A 103 LVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQI 144 (153)
T ss_dssp EEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCE
T ss_pred EEEeCCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCCCee
Confidence 999999888899999999999997777654 46666555553
|
| >2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A | Back alignment and structure |
|---|
Probab=99.57 E-value=8.5e-15 Score=134.33 Aligned_cols=107 Identities=23% Similarity=0.379 Sum_probs=87.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~Lr 551 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|. +...++ ..|+
T Consensus 28 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 101 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKP------MDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLR 101 (142)
T ss_dssp GTEEEEEEEEEESCCC------CCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEE
T ss_pred CCEEEEEEEEecCCCC------CCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEE
Confidence 4579999999999963 234567899999999764444568899999999999999999998 654443 6899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 587 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d 587 (605)
|.|||+|..+++++||++.+||..+..|. .+++|..
T Consensus 102 i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 102 ISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999998888999999999999998764 2346543
|
| >2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=9.9e-15 Score=133.89 Aligned_cols=110 Identities=18% Similarity=0.254 Sum_probs=87.8
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+..+ +||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 23 ~~~L~v~v~~a~~L~~------~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 95 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIA------FSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDV 95 (142)
T ss_dssp TTEEEEEEEEEECCCC------SSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEE
T ss_pred CCEEEEEEEEeECCCC------CCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEE
Confidence 4579999999999963 23456 899999999754434467899999999999999999999876554 38999
Q ss_pred EEEeccCCCC--CCccEEEEEECCccCCc---cEEEEccCCCCC
Q 007399 553 EVHEYDMSEK--DDFGGQTCLPVSELKQG---IRAVPLHDRKGE 591 (605)
Q Consensus 553 ~V~D~D~~~~--ddflGq~~lpL~sLr~G---yR~IpL~d~~g~ 591 (605)
.|||+|..+. +++||++.++|..+..+ -+|.+|.+..++
T Consensus 96 ~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 96 AVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGP 139 (142)
T ss_dssp EEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSC
T ss_pred EEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCC
Confidence 9999997653 57999999999998654 246788876544
|
| >2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=8.3e-15 Score=138.13 Aligned_cols=114 Identities=21% Similarity=0.181 Sum_probs=90.8
Q ss_pred CcceEEEEEEeccccccCCCCCccC--------CCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC
Q 007399 474 AKKTLKVTVYMGEGWYYDFPHTHFD--------AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP 545 (605)
Q Consensus 474 ~~~~L~V~Visaq~L~~~~~~~~~d--------~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p 545 (605)
..+.|+|+|+.|++|+. .+.. ..+.+||||+|.+.+ ....||+++++++||+|||+|.|.+..
T Consensus 27 ~~g~L~V~VieA~~L~~----~D~~~~~~~f~~~~g~sDPYv~v~l~~----~~~~kT~v~~ktlnP~WNE~F~f~v~~- 97 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQP----TRWSLRHSLFKKGHQLLDPYLTVSVDQ----VRVGQTSTKQKTNKPTYNEEFCANVTD- 97 (157)
T ss_dssp EEEEEEEEEEEEECCCC----CHHHHHTTTSSSSCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEE-
T ss_pred CccEEEEEEEEEECCCC----ccccccccccccCCCCCCeEEEEEECC----EeeEEeeecCCCCCCccCcEEEEEcCC-
Confidence 35679999999999963 1100 124589999999843 234689999999999999999999864
Q ss_pred CccEEEEEEEeccCCCCCCccEEEEEECCccCCc-------cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 546 ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 546 ela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~G-------yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
...|.|.|||+|..+++++||++.|||..|..| -.|++|.. .+.|.++++|
T Consensus 98 -~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~ 155 (157)
T 2fk9_A 98 -GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITL 155 (157)
T ss_dssp -ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEE
T ss_pred -CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEE
Confidence 458999999999888899999999999998754 36888853 4688888887
|
| >3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.7e-15 Score=136.71 Aligned_cols=113 Identities=19% Similarity=0.235 Sum_probs=90.0
Q ss_pred cceEEEEEEeccccccCCCCCccC-CCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d-~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
...|.|+|++|++|+. .+ ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 22 ~~~L~V~v~~a~~L~~------~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~ 95 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAY------ADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQ 95 (148)
T ss_dssp TTEEEEEEEEEESCCC------SBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEE
T ss_pred CCEEEEEEEEecCCCC------cccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEE
Confidence 4579999999999963 12 3467899999998754443558899999999999999999999887765 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCCCCCcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERY 593 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l 593 (605)
|.|||+|..+++++||++.+||..+..+. +|.+|..+.+..-
T Consensus 96 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~~~ 140 (148)
T 3fdw_A 96 FSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAES 140 (148)
T ss_dssp EEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-----
T ss_pred EEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCcccccc
Confidence 99999998888999999999999997553 6889987766543
|
| >1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=133.03 Aligned_cols=112 Identities=17% Similarity=0.243 Sum_probs=89.9
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEee-ecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v-~~pel--a~Lr 551 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+ ...++ ..|+
T Consensus 20 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 93 (141)
T 1v27_A 20 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 93 (141)
T ss_dssp TTEEEEEEEEEESCCC------CSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEE
T ss_pred CCEEEEEEEEccCCCC------cCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEE
Confidence 4579999999999963 2445678999999986544445678999999999999999999994 44443 6899
Q ss_pred EEEEeccCCCC--CCccEEEEEECCccCC-c-cEEEEccCCCCCc
Q 007399 552 IEVHEYDMSEK--DDFGGQTCLPVSELKQ-G-IRAVPLHDRKGER 592 (605)
Q Consensus 552 f~V~D~D~~~~--ddflGq~~lpL~sLr~-G-yR~IpL~d~~g~~ 592 (605)
|.|||+|..++ +++||++.+||..+.. + -+|.+|.+....+
T Consensus 94 i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~~~g~ 138 (141)
T 1v27_A 94 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDSGP 138 (141)
T ss_dssp EEEEEBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCCSSCC
T ss_pred EEEEECCCCcCCCCceEEEEEEEccccCCCCCCceEECcccccCC
Confidence 99999998876 8999999999998743 3 3688998765543
|
| >3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=9.7e-15 Score=134.10 Aligned_cols=104 Identities=23% Similarity=0.282 Sum_probs=87.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+ .+..++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 33 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 104 (143)
T 3f04_A 33 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 104 (143)
T ss_dssp TTEEEEEEEEEECCCC------BGGGBCCCEEEEEEEES--CCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred CCEEEEEEEEecCCCC------CCCCCCcCcEEEEEEEC--CCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEE
Confidence 4679999999999963 23456789999999853 33457899999999999999999999876654 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---EEEEcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 586 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~ 586 (605)
.|||+|..+++++||++.++|..+..|. .|.+|.
T Consensus 105 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 105 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred EEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 9999999888999999999999998774 366765
|
| >1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.6e-15 Score=139.74 Aligned_cols=103 Identities=19% Similarity=0.262 Sum_probs=85.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 24 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i 97 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 97 (159)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEE
Confidence 4579999999999963 244567899999998753323357899999999999999999999877665 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEE
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV 583 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~I 583 (605)
.|||+|..+++++||++.+++.++..|++|+
T Consensus 98 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w 128 (159)
T 1tjx_A 98 TVLDYDKIGKNDAIGKVFVGYNSTGAELRHW 128 (159)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHHHH
T ss_pred EEEECCCCCCCceEEEEEECCCCCCcHHHHH
Confidence 9999998888999999999999876665543
|
| >1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=134.31 Aligned_cols=107 Identities=26% Similarity=0.421 Sum_probs=89.8
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 554 (605)
..|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|.|
T Consensus 31 ~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 104 (149)
T 1a25_A 31 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI 104 (149)
T ss_dssp SEEEEEEEEEESCCC------CSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred CEEEEEEEEeeCCCC------CCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEE
Confidence 469999999999963 244567899999999764444567899999999999999999999876554 5899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCcc--EEEEccCC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQGI--RAVPLHDR 588 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~Gy--R~IpL~d~ 588 (605)
||+|..+++++||++.++|..|..+- +|.+|.+.
T Consensus 105 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~ 140 (149)
T 1a25_A 105 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 140 (149)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBCH
T ss_pred EECCCCCCCCEEEEEEEEHHHhCcCccCCeEEccCC
Confidence 99999888999999999999987653 57888764
|
| >2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=6e-15 Score=138.60 Aligned_cols=106 Identities=21% Similarity=0.246 Sum_probs=86.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
...|+|+|+.|++|+. .+..+.+||||+|.+.+...+ ..++||+++++++||+|||+|.|.+...++ ..|+
T Consensus 42 ~~~L~V~Vi~a~~L~~------~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~ 115 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSA------LLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLR 115 (155)
T ss_dssp TTEEEEEEEEEECGGG------TCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEE
T ss_pred CCEEEEEEEEccCcCC------cccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEE
Confidence 4679999999999964 244567899999999754333 247899999999999999999999876554 5899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCC-c---cEEEEcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQ-G---IRAVPLH 586 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~-G---yR~IpL~ 586 (605)
|.|||+|..+++++||++.++|..+.. | -+|.+|.
T Consensus 116 ~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 116 VDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999998899999999999999852 2 2455664
|
| >1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=1e-14 Score=133.17 Aligned_cols=114 Identities=17% Similarity=0.178 Sum_probs=87.6
Q ss_pred cceEEEEEEeccccccCCCCCccC--------CCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFD--------AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE 546 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d--------~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe 546 (605)
.+.|+|+|++|++|+.. .... ....+||||+|.+.+ ....+|+++.++.||+|||+|.|.+..+
T Consensus 5 ~g~L~v~v~~a~~L~~~---d~~~~~~~g~~~~~~~~DPyv~v~l~~----~~~~~T~~~~~t~nP~WnE~f~f~v~~~- 76 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPT---AWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG- 76 (136)
T ss_dssp EEEEEEEEEEEESCCCC---HHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE-
T ss_pred ceEEEEEEEeCcCCCCc---ccccccccccccCCcCcCcEEEEEECC----eEeeeeeEECCCcCCccCCEEEEEecCC-
Confidence 35799999999999631 0000 012389999999843 2346899999999999999999998654
Q ss_pred ccEEEEEEEeccCCCCCCccEEEEEECCccCCc-c----EEEEccCCCCCcccCeEEEEEEEE
Q 007399 547 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-I----RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 547 la~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~G-y----R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
..|+|.|||+|..+++++||++.+||..+..+ . .|++|.. .+.|.++++|
T Consensus 77 -~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-------~G~i~l~l~~ 131 (136)
T 1gmi_A 77 -RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDL 131 (136)
T ss_dssp -CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEE
T ss_pred -CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-------CeEEEEEEEE
Confidence 78999999999888899999999999998753 2 4566642 4678888776
|
| >2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=2e-14 Score=131.87 Aligned_cols=106 Identities=21% Similarity=0.252 Sum_probs=86.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC-C--ccEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-E--LALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p-e--la~Lr 551 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+ .+..++||++++++.||+|||+|.|.+..+ + ...|+
T Consensus 25 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 96 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPA------KDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILY 96 (141)
T ss_dssp SCCEEEEEEEEESCCC------CSSSSCCCEEEEEEEES--CCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEE
T ss_pred CCEEEEEEEEeECCCC------CCCCCCCCcEEEEEEEC--CCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEE
Confidence 3569999999999963 24456789999999864 334678999999999999999999985322 2 36899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 588 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~ 588 (605)
|.|||+|..+++++||++.+||..+..|. +|.+|...
T Consensus 97 i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 97 LQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred EEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 99999998888999999999999998774 46777654
|
| >1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=4.7e-15 Score=135.89 Aligned_cols=109 Identities=19% Similarity=0.305 Sum_probs=88.8
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC---------cceeeccccCCCCCCeeccEEEEe-eecC
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD---------TVMKKTKTLEDNWIPSWNEEFEFP-LSVP 545 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D---------~~k~kTkvv~nn~NPvWNEtf~F~-v~~p 545 (605)
+.|.|+|++|++|+. .+..+.+||||+|.+.+.+.. ..++||++++++.||+|||+|.|. +...
T Consensus 18 ~~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~ 91 (142)
T 1rh8_A 18 GNLIIHILQARNLVP------RDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME 91 (142)
T ss_dssp TEEEEEEEEEESCCC------CSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred CEEEEEEEEecCCCC------CCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHH
Confidence 469999999999963 244577899999999764322 246799999999999999999997 6543
Q ss_pred C--ccEEEEEEEeccCCCCCCccEEEEEECCccCCc---cEEEEccCCCC
Q 007399 546 E--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG 590 (605)
Q Consensus 546 e--la~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g 590 (605)
+ ...|+|.|||+|..+++++||++.+||..+..+ -+|.||.+..+
T Consensus 92 ~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred HccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence 3 358999999999988899999999999998654 57899987654
|
| >1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=4.7e-14 Score=129.31 Aligned_cols=106 Identities=20% Similarity=0.200 Sum_probs=86.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|+.|++. +..+.+||||+|.+.+. ....++||+++++++||+|||+|.|.+...++ ..|+|
T Consensus 25 ~~~L~V~v~~a~~~---------d~~g~sDPyv~v~l~~~-~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~ 94 (138)
T 1wfm_A 25 KAELFVTRLEAVTS---------NHDGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTL 94 (138)
T ss_dssp TTEEEEEEEEEECC---------CCSSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEE
T ss_pred CCEEEEEEEEEEcC---------CCCCCcceEEEEEEEcC-CCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEE
Confidence 45799999999832 34467899999998641 22346799999999999999999999887665 58999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---cEEEEccCCCC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG 590 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g 590 (605)
.|||+|..+++++||++.+||..+..+ -.|.+|.....
T Consensus 95 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 95 TLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp EEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred EEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 999999988899999999999999643 35778887544
|
| >3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.6e-14 Score=133.16 Aligned_cols=109 Identities=18% Similarity=0.197 Sum_probs=88.8
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~ 553 (605)
...|.|+|++|++|+. .+ .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 26 ~~~L~V~v~~a~~L~~------~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~ 98 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLIS------KQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVT 98 (153)
T ss_dssp SSEEEEEEEEEESCCC------CS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEE
T ss_pred CCEEEEEEEEeeCCCC------CC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEE
Confidence 4679999999999963 22 367899999999865555678899999999999999999999865444 469999
Q ss_pred EEeccCCCC-CCccEEEEEECCccCC-c---cEEEEccCCCC
Q 007399 554 VHEYDMSEK-DDFGGQTCLPVSELKQ-G---IRAVPLHDRKG 590 (605)
Q Consensus 554 V~D~D~~~~-ddflGq~~lpL~sLr~-G---yR~IpL~d~~g 590 (605)
|||+|..++ +++||++.+||..|.. + -.|.+|.+...
T Consensus 99 V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 99 VWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHL 140 (153)
T ss_dssp EEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTG
T ss_pred EEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhh
Confidence 999998766 8999999999999873 3 25789987554
|
| >1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=6e-14 Score=128.15 Aligned_cols=105 Identities=20% Similarity=0.331 Sum_probs=85.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCC-CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALL 550 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~-s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~L 550 (605)
...|.|+|++|++|+. .+.. +.+||||+|.+.+ ....++||++++++.||+|||+|.|. +...++ ..|
T Consensus 21 ~~~L~v~v~~a~~L~~------~d~~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l 92 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPA------MDEQSMTSDPYIKMTILP--EKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELAL 92 (138)
T ss_dssp GTEEEEEEEEEESCCC------CBTTTTBCEEEEEEEEET--TTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEE
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCCCEEEEEEec--CCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEE
Confidence 4569999999999963 2333 6689999999874 23468899999999999999999995 766554 589
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccCCc--cE--EEEccC
Q 007399 551 RIEVHEYDMSEKDDFGGQTCLPVSELKQG--IR--AVPLHD 587 (605)
Q Consensus 551 rf~V~D~D~~~~ddflGq~~lpL~sLr~G--yR--~IpL~d 587 (605)
+|.|||+|..+++++||++.+||..+..+ .. |.+|..
T Consensus 93 ~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 93 HFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 99999999988899999999999999764 32 356654
|
| >2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=4.5e-14 Score=127.09 Aligned_cols=105 Identities=18% Similarity=0.238 Sum_probs=80.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeee-cCC--ccEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS-VPE--LALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~-~pe--la~Lr 551 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+. ..+ ...|+
T Consensus 17 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 90 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 90 (129)
T ss_dssp TTEEEEEEEEEESCCC------CTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEE
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEE
Confidence 3569999999999963 24456789999999976444467889999999999999999999953 333 36899
Q ss_pred EEEEeccCCCC--CCccEEEEEECCccCC-cc-EEEEc
Q 007399 552 IEVHEYDMSEK--DDFGGQTCLPVSELKQ-GI-RAVPL 585 (605)
Q Consensus 552 f~V~D~D~~~~--ddflGq~~lpL~sLr~-Gy-R~IpL 585 (605)
|.|||+|..++ +++||++.+||..+.. |. +|.+|
T Consensus 91 ~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L 128 (129)
T 2bwq_A 91 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL 128 (129)
T ss_dssp EEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred EEEEECCcCcCcCCceeEEEEEEccccCCCcCCccEEC
Confidence 99999998876 8999999999998743 32 45565
|
| >2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=6.2e-14 Score=129.42 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=85.1
Q ss_pred cceEEEEEEeccccccC-CCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYD-FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~-~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
...|.|+|++|++|+.. ......+..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLP--DQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEET--CCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEe--CCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 45799999999999631 0000012345789999999864 22357899999999999999999999876555 3899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 587 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d 587 (605)
|.|||+|..+++++||++.+||..+..+- .|.+|..
T Consensus 103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999998888999999999999986543 3445553
|
| >2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.51 E-value=4e-14 Score=134.70 Aligned_cols=108 Identities=20% Similarity=0.184 Sum_probs=87.2
Q ss_pred ceEEEEEEeccccccCCCCCccCC-CCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~-~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
..|.|+|++|++|+. .+. .+.+||||+|.+.+......++||+++++++||+|||+|.|.+.. +...|+|.|
T Consensus 30 ~~L~V~v~~a~~L~~------~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V 102 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQ------KPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIV 102 (171)
T ss_dssp TEEEEEEEEEESCCC------CC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEE
T ss_pred CEEEEEEEEeeCCCC------CCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEE
Confidence 569999999999963 232 467899999998763322347899999999999999999999854 357899999
Q ss_pred E-eccCCCCCCccEEEEEECCccCCcc---EEEEccCCCC
Q 007399 555 H-EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG 590 (605)
Q Consensus 555 ~-D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g 590 (605)
| |+|..+++++||++.++|..+..|. +|.+|.....
T Consensus 103 ~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 142 (171)
T 2q3x_A 103 WGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSS 142 (171)
T ss_dssp EEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGGG
T ss_pred EEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCccc
Confidence 9 9998888999999999999997553 5778876543
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=3.7e-13 Score=137.28 Aligned_cols=122 Identities=21% Similarity=0.270 Sum_probs=96.5
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+ .+..+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 18 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~ 89 (284)
T 2r83_A 18 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVM 89 (284)
T ss_dssp TTEEEEEEEEEECCCC------CSSSSSCCEEEEEEEET--CTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEE
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCeEEEEEEEc--CCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEE
Confidence 4579999999999963 24456789999999864 23357789999999999999999999877655 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCCCCC-cccCeEEEEEEEE
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGE-RYKSVKLLMHFEF 604 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~-~l~~atLlv~i~f 604 (605)
.|||+|..+++++||++.+||..+..|. .|.+|.+..+. ....+.|.+.+.+
T Consensus 90 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~ 145 (284)
T 2r83_A 90 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRY 145 (284)
T ss_dssp EEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEE
T ss_pred EEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEe
Confidence 9999998888999999999999997663 46799876543 2233556655543
|
| >3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.8e-13 Score=123.72 Aligned_cols=113 Identities=19% Similarity=0.242 Sum_probs=95.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccC-CCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~-nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
.+-|+|.|.+|.+|+ +..||+++|.+.| .++||++++ ++.||+|||.|+|++.-+.. .+|.
T Consensus 20 ~msL~V~l~~a~~Lp-----------g~~Dp~akv~FRg-----~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~ 83 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----------GRADRIAKVTFRG-----QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLE 83 (144)
T ss_dssp CEEEEEEEEEEESCC-----------SCEEEEEEEEETT-----EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEE
T ss_pred cEEEEEEEEEecCCC-----------CCCCCeEEEEEec-----cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEE
Confidence 356999999999995 2479999999965 688999998 57999999999999876543 6999
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCccE---EEEccCCCCCcccCeEEEEEEEE
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.|+|++..+++++||++++||..|..+-+ ..+|.|.++++++ |+|.+.+.+
T Consensus 84 v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~-a~I~l~l~Y 138 (144)
T 3l9b_A 84 IQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIK-TSLSMEVRY 138 (144)
T ss_dssp EEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEE-EEEEEEEEE
T ss_pred EEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccc-cEEEEEEEe
Confidence 999999999999999999999998854433 3599999999986 788777654
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-12 Score=134.85 Aligned_cols=122 Identities=22% Similarity=0.266 Sum_probs=94.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCcc--EEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela--~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+. +....++||++++++.||+|||+|.|.+..+++. .|+|
T Consensus 19 ~~~L~v~v~~a~~L~~------~d~~g~~dPyv~v~l~--~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 90 (296)
T 1dqv_A 19 SDQLVVRILQALDLPA------KDSNGFSDPYVKIYLL--PDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF 90 (296)
T ss_dssp SCEEEEEEEEEECCCC------CSTTSCCCEEEEEECT--TSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred CCEEEEEEEEeECCCC------cCCCCCcCeEEEEEEE--cCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEE
Confidence 3569999999999963 2445778999999985 3334678999999999999999999998776654 8999
Q ss_pred EEEeccCCCCCCccEEEEEE-CCccC---Cc-cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 553 EVHEYDMSEKDDFGGQTCLP-VSELK---QG-IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lp-L~sLr---~G-yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
.|||+|..+++++||++.++ +..+. .+ -.|.+|....+.....+.|.+.+.+
T Consensus 91 ~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y 147 (296)
T 1dqv_A 91 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCY 147 (296)
T ss_dssp EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEE
T ss_pred EEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEe
Confidence 99999998889999999996 43332 22 3477887766555555667666554
|
| >2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=8.5e-13 Score=120.38 Aligned_cols=111 Identities=21% Similarity=0.231 Sum_probs=78.7
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccC-CCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~-nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
..|+|+|+.|++++. .+.+||||+|. + .+.||+++. ++.||+|||+|.|.+..++. .|+|.|
T Consensus 5 ~~L~V~V~~A~~l~~---------~g~~DPYv~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~V 67 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---------QEKFNTYVTLK--V-----QNVKSTTIAVRGSQPSWEQDFMFEINRLDL-GLTVEV 67 (131)
T ss_dssp EEEEEEEEEEECSSC---------GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEEECCCSS-EEEEEE
T ss_pred eEEEEEEEEeECCCC---------CCCcCeEEEEE--e-----cCEEEeEecCCCCCceECCEEEEEEeCCCC-eEEEEE
Confidence 469999999997631 24579999998 2 234566665 57999999999999986554 599999
Q ss_pred EeccCCCCCCccEEEEEECCccC----Cc-cEEEEcc----CCCCCcc-----cCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELK----QG-IRAVPLH----DRKGERY-----KSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr----~G-yR~IpL~----d~~g~~l-----~~atLlv~i~f 604 (605)
||+| .+++++||++.+||..+. .| +++.||. .++|+.. ...+|++.+.|
T Consensus 68 ~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 68 WNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EECC-SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred EECC-CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 9999 778999999999999984 23 2555543 3444432 23467777666
|
| >2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=4.7e-13 Score=136.46 Aligned_cols=102 Identities=20% Similarity=0.273 Sum_probs=84.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 149 ~~~l~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i 222 (284)
T 2r83_A 149 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 222 (284)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEE
T ss_pred CCceEEEEEEeECCCC------cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEE
Confidence 4579999999999963 244567899999998753222356799999999999999999999987765 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEE
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA 582 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~ 582 (605)
.|||+|..+++++||++.+++.++..|+||
T Consensus 223 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~ 252 (284)
T 2r83_A 223 TVLDYDKIGKNDAIGKVFVGYNSTGAELRH 252 (284)
T ss_dssp EEEECCSSSCCCEEEEEEEETTCCHHHHHH
T ss_pred EEEeCCCCCCCcEEEEEEECCCCCCcHHHH
Confidence 999999988899999999999987655443
|
| >3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=143.48 Aligned_cols=114 Identities=21% Similarity=0.339 Sum_probs=94.0
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
...|+|+|++|++|+. .+..+.+||||+|.+.+ .+++|++++++.||+|||+|.|.+..+....|+|.|
T Consensus 386 ~~~l~v~v~~a~~L~~------~d~~~~sdpyv~v~~~~-----~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v 454 (510)
T 3jzy_A 386 IGRLMVHVIEATELKA------CKPNGKSNPYCEISMGS-----QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTL 454 (510)
T ss_dssp CEEEEEEEEEEESCCC------CSTTSCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEE
T ss_pred CceEEEEeceeecCCC------CCCCCCCCeEEEEEECC-----eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEE
Confidence 3579999999999953 34457789999999832 578999999999999999999999877778899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCcc-------EEEEccCCCCCcccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQGI-------RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~Gy-------R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
||+|..+++++||++.+||..+..|. .|++|... ..+.|.|++++
T Consensus 455 ~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~-----~~G~i~l~~~l 506 (510)
T 3jzy_A 455 FDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV-----PTGEVWVRFDL 506 (510)
T ss_dssp EECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS-----SSCEEEEEEEE
T ss_pred EeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC-----CCceEEEEEEE
Confidence 99999888999999999999997653 56787654 33566666654
|
| >2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=4e-12 Score=120.90 Aligned_cols=85 Identities=21% Similarity=0.232 Sum_probs=69.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccC-CCCCCeeccEEEEeeecCCccEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~-nn~NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
...|.|+|+.|++++ ..+.+||||+|. + .+.||+++. ++.||+|||+|.|.+..++. .|+|.
T Consensus 13 ~~~L~V~V~~A~~l~---------~~g~~DPYV~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~ 75 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---------AQEKFNTYVTLK--V-----QNVESTTIAVRGSQPSWEQDFMFEINRLDL-GLTVE 75 (167)
T ss_dssp CCEEEEEEEEEECSS---------CGGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEECCCTTS-EEEEE
T ss_pred eEEEEEEEEEEECCC---------CCCCCCeEEEEE--e-----cceEEEEecCCCCCCCCCCEEEEEeeCCCC-EEEEE
Confidence 356999999999763 124579999998 2 245677776 57999999999999986544 69999
Q ss_pred EEeccCCCCCCccEEEEEECCccC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
|||+| .+++++||++.+||..+.
T Consensus 76 V~D~d-~~~dd~iG~~~i~L~~l~ 98 (167)
T 2cjs_A 76 VWNKG-LIWDTMVGTVWIPLRTIR 98 (167)
T ss_dssp EEECC-SSCCEEEEEEEEEGGGSC
T ss_pred EEECC-CCCCceEEEEEEEHHHhc
Confidence 99999 778999999999999984
|
| >1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.3e-12 Score=147.89 Aligned_cols=117 Identities=24% Similarity=0.356 Sum_probs=89.6
Q ss_pred ccCCCCCC----CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEE
Q 007399 465 VFDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF 540 (605)
Q Consensus 465 ~f~p~~~~----p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F 540 (605)
.|||.... +....|+|+|++|++|+.. ...+..+.+||||+|.+.+.+ ..++||+++++++||+|||+|.|
T Consensus 3 ~fdP~~~~~ve~~~~g~L~V~Vi~A~nL~~~---~~~D~~g~sDPYV~V~l~~~~--~~k~kTkvik~tlNPvWNEtF~F 77 (749)
T 1cjy_A 3 FIDPYQHIIVEHQYSHKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEF 77 (749)
T ss_dssp ----------CCCCCEEEEEEEEEEECCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEE
T ss_pred CCCCCccccccCCCccEEEEEEEEEECCCCc---cccCCCCCcCeEEEEEEecCC--CCeEecceEcCCCCCeeeeEEEE
Confidence 47775432 2346899999999999520 002345678999999987533 36789999999999999999999
Q ss_pred eeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccC
Q 007399 541 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 587 (605)
Q Consensus 541 ~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d 587 (605)
.+..++...|+|.|||+|..+ +++||++.++|..|..|+ +|.+|..
T Consensus 78 ~v~~~~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 78 ILDPNQENVLEITLMDANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp EECTTSCCBCEEEEEECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred EecCCCCCEEEEEEEECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 998877788999999999988 999999999999999887 4567754
|
| >1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A | Back alignment and structure |
|---|
Probab=99.25 E-value=9.1e-13 Score=135.79 Aligned_cols=98 Identities=18% Similarity=0.218 Sum_probs=81.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|+.|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 151 ~~~l~v~v~~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 224 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKA------MDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI 224 (296)
T ss_dssp TTEEEEEEEEEESCCC------CSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCC
T ss_pred cceeEEEEEEeecCCc------cCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEE
Confidence 4679999999999953 244566799999998642223457899999999999999999999876654 46999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQ 578 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~ 578 (605)
.|||+|..+++++||++.+++.++..
T Consensus 225 ~V~d~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 225 AVVDYDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp EEEECCSSSCCEEEEECCCSSCTTCH
T ss_pred EEEeCCCCCCCceEEEEEECCccCCc
Confidence 99999998889999999999998754
|
| >3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.23 E-value=5.8e-11 Score=132.17 Aligned_cols=88 Identities=23% Similarity=0.287 Sum_probs=76.0
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeee-cCCccEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS-VPELALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~-~pela~Lrf~ 553 (605)
...|+|+|+.|++|+. |.++.+||||+|.+.+ .+.||+++++++||+|||+|.|.+. .+....|+|.
T Consensus 393 ~~~L~V~V~~A~~L~~-------D~~g~sDPYV~v~l~~-----~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~ 460 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-------DYTTATDAYLKVFFGG-----QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQ 460 (540)
T ss_dssp EEEEEEEEEEEESCCC-------SSCSCCCEEEEEEETT-----EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEE
T ss_pred ccEEEEEEEEccCCCc-------ccCCCcCeEEEEEECC-----EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEE
Confidence 3579999999999942 4567899999999854 4689999999999999999999864 4456789999
Q ss_pred EEeccCCCCCCccEEEEEECC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVS 574 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~ 574 (605)
|||+|..+++|+||++.++|.
T Consensus 461 V~D~D~~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 461 VWDADYGWDDDLLGSCDRSPH 481 (540)
T ss_dssp EEECCSSSCCEEEEEEEECCC
T ss_pred EEECCCCCCCCEEEEEEEEee
Confidence 999999888999999999987
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=98.96 E-value=9.9e-10 Score=125.68 Aligned_cols=107 Identities=26% Similarity=0.456 Sum_probs=88.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 554 (605)
..|.|+|+.|++|+. .+..+.+||||++.+.+.+....+++|+++++++||+|||+|.|.+...+. ..|.|.|
T Consensus 172 ~~L~V~v~~a~~L~~------~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v 245 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEI 245 (674)
T ss_dssp SEEEEEEEEEESCCC------CSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEE
T ss_pred ceeeeeeecccccCC------CCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEE
Confidence 568999999999853 345677899999999776666678899999999999999999999876554 4699999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc-c-EEEEccCC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG-I-RAVPLHDR 588 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G-y-R~IpL~d~ 588 (605)
||+|..++++++|++.++++.+..+ . .|.+|.+.
T Consensus 246 ~d~d~~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls~ 281 (674)
T 3pfq_A 246 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 281 (674)
T ss_dssp EECCSSSCCEECCBCCCBTTHHHHCCEEEEEECBCT
T ss_pred eecccccccccccccccchhhhccCCcccceeeccc
Confidence 9999999999999999999988543 2 35566553
|
| >2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.1e-09 Score=112.18 Aligned_cols=136 Identities=13% Similarity=0.289 Sum_probs=102.4
Q ss_pred CCcccceeeeccCcccccCCCC-------CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHH
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQL-------NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCL 184 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql-------~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi 184 (605)
+.||+++.|-.|||++..+... .+.+-...+..-|..|+|.++|+|++ +..++||... ...+|.||+
T Consensus 13 ~~~l~~l~ipGtHdS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GvR~ldlr~~~-----~~~~~H~~~~-~~~~~~~~L 86 (274)
T 2plc_A 13 TTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKD-----NLNIYHGPIF-LNASLSGVL 86 (274)
T ss_dssp TCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEECT-----TSEEEETTEE-EEEEHHHHH
T ss_pred CCeeeeeeeeeecchhhccCCCccccccccccCCCcCHHHHHHhCCcEEEEEECC-----cEEEEEcCCC-CCCCHHHHH
Confidence 5799999999999997655421 12333345678899999999999992 4789999663 467999999
Q ss_pred HHHhhhhhccCCCceEEEeccCCCHHHH-HHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecC
Q 007399 185 RSIKEYAFVASEYPVVITLEDHLTPDLQ-AKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTK 253 (605)
Q Consensus 185 ~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ-~~ma~~~~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K 253 (605)
+.|+++.=..-.=.|||+|+++.+.+.. ..+++.+.+.||+.++.++. .....+|+..+++|||+|-..
T Consensus 87 ~~i~~fL~~~P~EvVil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~pTL~e~rGK~vlv~~ 157 (274)
T 2plc_A 87 ETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSE 157 (274)
T ss_dssp HHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSCCCCCCCBTTTTTTCEEEEEE
T ss_pred HHHHHHHHhCCCceEEEEEEeCCCCCCcHHHHHHHHHHHhhceeecCcccccCCCCCCHHHhCCCEEEEEe
Confidence 9999986555445899999998754221 22345556899999998653 224678999999999999653
|
| >3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.94 E-value=7.4e-11 Score=130.00 Aligned_cols=99 Identities=19% Similarity=0.288 Sum_probs=10.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCC---CCCeeccEEEEeeecCCccEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN---WIPSWNEEFEFPLSVPELALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn---~NPvWNEtf~F~v~~pela~Lr 551 (605)
.+.|+|+|+.|++|+. .+ ||||++.+.+ ..+.||++++++ .||+|||+|.|.+. +....|.
T Consensus 10 ~~~L~V~VieAk~L~~------~d-----dpYv~v~l~~----~~~~kT~v~~kt~~glnP~WnE~F~f~~~-~~~~~L~ 73 (483)
T 3bxj_A 10 DNVLKLWIIEARELPP------KK-----RYYCELCLDD----MLYARTTSKPRSASGDTVFWGEHFEFNNL-PAVRALR 73 (483)
T ss_dssp EECC------------------------------------------------------------CCEECC----------
T ss_pred ccEEEEEEEEcCCcCC------CC-----CCeEEEEECC----eEEeeeeEEeCCCCCCCCccccEEEEecC-CCccEEE
Confidence 3569999999999953 11 8999999855 235689999988 99999999999975 3367899
Q ss_pred EEEEec-c---CCCCCCccEEEEEECCccCCcc---EEEEccCCC
Q 007399 552 IEVHEY-D---MSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 589 (605)
Q Consensus 552 f~V~D~-D---~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~ 589 (605)
|.|||+ | ..+++++||.+.+|++.+..|. .|.||.++.
T Consensus 74 v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~ 118 (483)
T 3bxj_A 74 LHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPT 118 (483)
T ss_dssp ---------------------------------CCEECC------
T ss_pred EEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCC
Confidence 999994 4 2567999999999999998763 477887654
|
| >3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} SCOP: c.1.18.2 PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00017 Score=74.26 Aligned_cols=136 Identities=11% Similarity=0.122 Sum_probs=90.7
Q ss_pred CCcccceeeeccCcccccCCCC-----CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHH
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQL-----NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql-----~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
+.||+++.|=-|||++-..-.. .+..-......=|..|+|-+.|+|-..++ +...++||--.+ ..+|.||+..
T Consensus 20 ~~pl~~lsiPGTHdS~a~~~~~~~~~~~~~tQ~~si~~QL~~GIR~lDlRv~~~~~-~~l~~~Hg~~~~-~~~l~dvL~e 97 (298)
T 3ea1_A 20 NIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDD-NTIVLHHGPLYL-YVTLHEFINE 97 (298)
T ss_dssp TSBTTTSCEEEETTTTCTTCCSHHHHHHHCCCSSCHHHHHHTTCCEEEEEEEECTT-SCEEEEETTEEE-EEEHHHHHHH
T ss_pred CCeeeeeeeccccccccccCCCchhhhcccCccccHHHHHhcCCeEEEEEeEecCC-CcEEEECCcccc-cCCHHHHHHH
Confidence 6799999999999986543210 00111112345688999999999975432 357899994332 4679999999
Q ss_pred HhhhhhccCCCceEEEeccCCCH---HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCcEEEecC
Q 007399 187 IKEYAFVASEYPVVITLEDHLTP---DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTK 253 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc~~---~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 253 (605)
|+++.=....==|||+|.+-=+. ......+.+++.+|++.++.+ ....|+..++||||+|-..
T Consensus 98 i~~FL~~hP~EvVil~ik~e~~~~~~~~~~f~~~~~~~~~~~~~~~~----~~~~ptLge~RGKivll~r 163 (298)
T 3ea1_A 98 AKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSSTFEKNYFVDPIFLK----TEGNIKLGDARGKIVLLKR 163 (298)
T ss_dssp HHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTBCC----CCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHHCCCeEEEEEEEecCCCcCcchHHHHHHHHHHHhcCccccc----CCCCCcHHHhcCCEEEEEe
Confidence 99865443344588888663321 122334455667788766543 2456899999999998754
|
| >3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00015 Score=75.07 Aligned_cols=136 Identities=16% Similarity=0.228 Sum_probs=88.5
Q ss_pred CCcccceeeeccCcccccCCCCC-----CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHH
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~-----g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
+.||+++.|=-|||++-..-... +.+-......=|..|+|-+.|+|...++ +...++||-..+ ..+|.|||+.
T Consensus 16 ~~~l~~lsiPGTHdS~~~~~~~p~~~~~~~tQ~~si~~QL~~GVR~lDlRv~~~~~-~~l~~~Hg~~~~-~~~l~dvL~~ 93 (306)
T 3v1h_A 16 GKHLTEINIPGSHDSGSFTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASAD-NMISVHHGMVYL-HHELGKFLDD 93 (306)
T ss_dssp TSBGGGSCEEEETTGGGGGCCCHHHHHHHCCCSSCHHHHHHTTCCEEEEEEEEEET-TEEEEEETTEEE-EEEHHHHHHH
T ss_pred CCEeecceeccccchhhccCCCcccchhhccCCCCHHHHHHhCcceEEEEeeecCC-CcEEEEccCccc-CCcHHHHHHH
Confidence 68999999999999875432100 0111122467788999999999965332 346789985332 6789999999
Q ss_pred HhhhhhccCCCceEEEeccCCCH--HHHHHHHHHHHHH-hh-----ccccCCCCCCCCCCCChhhccCcEEEecC
Q 007399 187 IKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQT-LG-----EILFTPGSECLKEFPSPESLKRRIIISTK 253 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc~~--~qQ~~ma~~~~~i-~G-----d~L~~~~~~~~~~lPSP~~Lk~KIlik~K 253 (605)
|+++-=....=-|||+|+..-+. ..+...++++++. +- ++.++. ...+|+..++||||+|-.+
T Consensus 94 i~~FL~~hP~EvVil~l~~e~~~~~~~~~~f~~~~~~~~~~~~~~~~~~y~~----~~~~PtLge~RGKIvll~r 164 (306)
T 3v1h_A 94 AKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTG----SNANPTLKETKGKIVLFNR 164 (306)
T ss_dssp HHHHHHHSTTCCEEEEEEECSCCCTTCCSCHHHHHHHHTTTCGGGTTTBCCC----SCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHHCCCeEEEEEEEeCCCCCccchHHHHHHHHHHhhcCcccccceecC----CCCCCchHHhcCcEEEEEe
Confidence 99865443344588888877543 2233444555432 21 222221 2468999999999998754
|
| >1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.001 Score=59.60 Aligned_cols=90 Identities=17% Similarity=0.245 Sum_probs=61.5
Q ss_pred CCCceEEEEEecCCCCcceeec-cccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCC--
Q 007399 502 PPDFYARVGIAGVPADTVMKKT-KTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-- 578 (605)
Q Consensus 502 ~~DPyV~V~i~G~p~D~~k~kT-kvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~-- 578 (605)
..|||+.|.+.-..... +.+| .+.+.+..|+|||+|.-.|.. -..|.+.|+... .+|++.+++++..|..
T Consensus 26 ~lDPy~aV~vdE~~~~e-~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a----~~fvAn~tV~~edL~~~c 98 (126)
T 1yrk_A 26 ANQPFCAVKMKEALSTE-RGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA----EEPVSEVTVGVSVLAERC 98 (126)
T ss_dssp SCCCEEEEEEEEEEEET-TEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEET----TEEEEEEEEEHHHHHHHH
T ss_pred cCCceEEEEeeeeEEcc-cceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCC----CCeeeEEEEEHHHHHhhh
Confidence 47999988874211101 2244 556678999999999877653 467889998654 3899999999999862
Q ss_pred ----cc--EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 579 ----GI--RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 579 ----Gy--R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|- -||.|. + .+.|++.+++|
T Consensus 99 ~~~~g~~e~WvdLe-P------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 99 KKNNGKAEFWLDLQ-P------QAKVLMSVQYF 124 (126)
T ss_dssp HTTTTEEEEEEECB-S------SCEEEEEEEEE
T ss_pred ccCCCceEEEEecc-c------CcEEEEEEEEe
Confidence 22 355554 2 45677777764
|
| >2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0027 Score=57.61 Aligned_cols=110 Identities=14% Similarity=0.170 Sum_probs=69.3
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeec-cccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKT-KTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kT-kvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
-|+|++.+..--+.. . . .....|||+.|.+.-... ..+.+| .+.+.++.|+|||+|.-.|. +-..|.|.|+
T Consensus 11 flRi~l~~~~~~~~~--~--~-~~~~lDPY~aV~VdE~~~-te~gqtl~~KkkT~~P~Wne~Fd~~V~--~Gr~l~i~Vf 82 (138)
T 2enj_A 11 FLRIGLSNFDCGSCQ--S--C-QGEAVNPYCAVLVKEYVE-SENGQMYIQKKPTMYPPWDSTFDAHIN--KGRVMQIIVK 82 (138)
T ss_dssp CEEEEEEEEECCCCC--C--S-CCCCCCCEEEEEEEEEEE-ETTEEEEEEEEEEECCCSSSEEEECCC--SSCEEEEEEE
T ss_pred ceEEEeeccccCCCC--C--c-ccccCCceEEEEeeeeee-ccCceeecccCCCCCccccceEeeeEE--CCeEEEEEEE
Confidence 377777665432210 0 0 112479999888743110 012345 44455789999999987765 3467889998
Q ss_pred eccCCCCCCccEEEEEECCccCC------cc--EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQ------GI--RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~------Gy--R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
... .+|++.+++++..|.. |- -||.|. +.+.|++.++++
T Consensus 83 h~a----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe-------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 83 GKN----VDLISETTVELYSLAERCRKNNGKTEIWLELK-------PQGRMLMNARYF 129 (138)
T ss_dssp CSS----CSCCEEEEEESHHHHHHHHHTTTCEEEEEECB-------SSCEEEEEEEEC
T ss_pred cCC----CCeeeEEEEEHHHHHhhhccCCCceEEEEecc-------cCcEEEEEEEEE
Confidence 643 3899999999999862 22 356654 245677777764
|
| >3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0063 Score=60.78 Aligned_cols=68 Identities=16% Similarity=0.271 Sum_probs=52.4
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc--------------------------------cc-chH
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--------------------------------AP-VEL 180 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt--------------------------------s~-i~f 180 (605)
.-+-|.++|..|+..||..||+||+=-.| +.|||.|-.|+. -+ .+|
T Consensus 22 ~pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r~t~~~~~v~~~t~~el~~l~~~~~~~~~~~~~~iptL 100 (252)
T 3qvq_A 22 APENTLASLHLAGQQGIKWVEIDVMLSGD-GIPVIFHDDYLSRTTDGDGLIYKTPLAELKQLDAGSWKGQEYQQETIPTL 100 (252)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECCCSBSTTTSSCCSBGGGSCHHHHTTSCSSTTTCGGGTTCCCCBH
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEEECCC-CcEEEECCCccccccCCCceeecCcHHHHhcCCCCCccCccCCCCcCcCH
Confidence 45789999999999999999999996555 479999988763 12 458
Q ss_pred HHHHHHHhhhhhccCCCceEEEeccCCCH
Q 007399 181 IKCLRSIKEYAFVASEYPVVITLEDHLTP 209 (605)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~ 209 (605)
+||++.++++ .+.|-||.-...
T Consensus 101 ~evl~~~~~~-------~~~l~iEiK~~~ 122 (252)
T 3qvq_A 101 LEAIEVISQY-------GMGLNLELKPCE 122 (252)
T ss_dssp HHHHHHHHHT-------TCEEEEEECCCT
T ss_pred HHHHHHHhcc-------CcEEEEEecCCC
Confidence 9999988753 256667766543
|
| >3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.014 Score=57.90 Aligned_cols=69 Identities=17% Similarity=0.172 Sum_probs=53.6
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc--------------------cc-chHHHHHHHHhhhh
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--------------------AP-VELIKCLRSIKEYA 191 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt--------------------s~-i~f~dvi~aI~~~A 191 (605)
..-+-|.++|..|+..||..||+|++--.| +.|||.|-.|+. .+ -+|.||++.++++.
T Consensus 18 ~~pENTl~Af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~~~~v~~~t~~el~~l~~~~~~~iptL~evl~~~~~~~ 96 (238)
T 3no3_A 18 GSAQNSIRSLERASEIGAYGSEFDVHLTAD-NVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKKLK 96 (238)
T ss_dssp TCCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEETTEEGGGSCHHHHTTCBCTTSCBCCBHHHHHHHHHHCT
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCCCCCCChHhCCHHHHhhCCCCCCCcCCcHHHHHHHHhhcC
Confidence 345789999999999999999999997555 479999998873 23 46999999988641
Q ss_pred hccCCCceEEEeccCCC
Q 007399 192 FVASEYPVVITLEDHLT 208 (605)
Q Consensus 192 F~~S~yPvIlSlE~Hc~ 208 (605)
. +.|-||.-..
T Consensus 97 ----~--~~l~iEiK~~ 107 (238)
T 3no3_A 97 ----N--IRLIFELKSH 107 (238)
T ss_dssp ----T--CEEEEEECCC
T ss_pred ----C--ceEEEEeCCC
Confidence 1 5566777654
|
| >1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0056 Score=60.02 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=51.3
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc----------------ccc-hHHHHHHHHhhhhhccCC
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT----------------APV-ELIKCLRSIKEYAFVASE 196 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt----------------s~i-~f~dvi~aI~~~AF~~S~ 196 (605)
.-+-|.++|.+|+..||..||+|++=-.| +.|||.|-.|+. .+| +|+||++.+++ .
T Consensus 20 ~PENTl~Af~~A~~~G~d~iE~DV~lT~D-g~lVv~HD~~l~~g~v~~~t~~eL~~l~~~iptL~evl~~~~~------~ 92 (224)
T 1vd6_A 20 AKENTLESFRLALEAGLDGVELDVWPTRD-GVFAVRHDPDTPLGPVFQVDYADLKAQEPDLPRLEEVLALKEA------F 92 (224)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSCSEETTEEGGGSCHHHHHHHSTTCCBHHHHHGGGGT------C
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEecC-CcEEEECCCccCCCChhhCCHHHHHhcCCCCCCHHHHHHhhhc------c
Confidence 34789999999999999999999995444 479999999984 133 58999987763 2
Q ss_pred CceEEEeccCCC
Q 007399 197 YPVVITLEDHLT 208 (605)
Q Consensus 197 yPvIlSlE~Hc~ 208 (605)
..+.|-||.-..
T Consensus 93 ~~~~l~iEiK~~ 104 (224)
T 1vd6_A 93 PQAVFNVELKSF 104 (224)
T ss_dssp TTCEEEEEECCC
T ss_pred CCceEEEEECCC
Confidence 235566666543
|
| >2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.013 Score=58.19 Aligned_cols=81 Identities=19% Similarity=0.172 Sum_probs=56.9
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc--------------------------------c-chH
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA--------------------------------P-VEL 180 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts--------------------------------~-i~f 180 (605)
.-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+.. + -+|
T Consensus 19 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~g~~~~~~~~~~~iptL 97 (247)
T 2otd_A 19 APENTLAAIDVGAKYGHKMIEFDAKLSKD-GEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGSWYSKAFKGEPLPLL 97 (247)
T ss_dssp SCSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBSSTTSSCCSBGGGSCHHHHTTCCSSTTTCGGGTTCCCCBH
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCCccccCCCCccHhhCcHHHHhhCCCCCccCCCCCCCcCCCH
Confidence 34789999999999999999999996545 4799999988621 2 368
Q ss_pred HHHHHHHhhhhhccCCCceEEEeccCCCHH----HHHHHHHHHHHH
Q 007399 181 IKCLRSIKEYAFVASEYPVVITLEDHLTPD----LQAKVAEMVTQT 222 (605)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~----qQ~~ma~~~~~i 222 (605)
+||++.+++. .+.|-||.--... --..+++.+++.
T Consensus 98 ~evl~~~~~~-------~~~l~iEiK~~~~~~~~~~~~v~~~l~~~ 136 (247)
T 2otd_A 98 SQVAERCREH-------GMMANIEIKPTTGTGPLTGKMVALAARQL 136 (247)
T ss_dssp HHHHHHHHHT-------TCEEEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-------CCEEEEEECCCCCcchHHHHHHHHHHHHH
Confidence 9999988753 3556666554321 123455555554
|
| >3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.018 Score=57.41 Aligned_cols=65 Identities=17% Similarity=0.198 Sum_probs=51.3
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc----------------------------ccchHHHHHHH
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT----------------------------APVELIKCLRS 186 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt----------------------------s~i~f~dvi~a 186 (605)
-+-|.++|..|+..||+.||+||+=-.| +.+||.|-.|+. .--+|+||++.
T Consensus 16 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r~t~~~g~v~~~t~~el~~l~~~~~~~~~iptL~evl~~ 94 (250)
T 3ks6_A 16 GDSTPHGFTATAAMALEEVEFDLHPTAD-GAIVVHHDPTLDATTDMTGAIVDMTLAKVKTATIRYGAGSHPMTLEELCAL 94 (250)
T ss_dssp CTTCHHHHHHHHTSSSSEEEEEEEECTT-SCEEECSSSBSTTTBSCCSBGGGSCHHHHHHCCBTTSTTCCCEEHHHHHHH
T ss_pred CcchHHHHHHHHHcCCCEEEEEEeEccC-CCEEEECCCccccccCCCCeeecCcHHHHhcCCCCCCCCccCcCHHHHHHH
Confidence 4788999999999999999999996445 479999988873 12348899988
Q ss_pred HhhhhhccCCCceEEEeccCC
Q 007399 187 IKEYAFVASEYPVVITLEDHL 207 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc 207 (605)
+++ ..+.|-||.-.
T Consensus 95 ~~~-------~~~~l~iEiK~ 108 (250)
T 3ks6_A 95 YVD-------SHVNFRCEIKP 108 (250)
T ss_dssp HTT-------CSCEEEEEECC
T ss_pred Hhc-------cCcEEEEEeCC
Confidence 774 34778888766
|
| >1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0096 Score=58.84 Aligned_cols=64 Identities=17% Similarity=0.305 Sum_probs=50.5
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc----------------------ccc-hHHHHHHHHhhh
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT----------------------APV-ELIKCLRSIKEY 190 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt----------------------s~i-~f~dvi~aI~~~ 190 (605)
.-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+. .+| +|+||++.+++.
T Consensus 25 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~Rtt~~~g~v~d~T~~eL~~l~~~~iptL~evL~~~~~~ 103 (234)
T 1o1z_A 25 YLENTLEAFMKAIEAGANGVELDVRLSKD-GKVVVSHDEDLKRLFGLDVKIRDATVSELKELTDGKITTLKEVFENVSDD 103 (234)
T ss_dssp SCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEEHHHHCEEEEGGGSCHHHHHHHTTTCCCBHHHHHHHSCTT
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeEecC-CCEEEEcCCcHHhcCCcCcCcccCcHHHHhcCCCCCCCCHHHHHHhcccC
Confidence 34779999999999999999999997555 479999999873 133 599999988762
Q ss_pred hhccCCCceEEEeccC
Q 007399 191 AFVASEYPVVITLEDH 206 (605)
Q Consensus 191 AF~~S~yPvIlSlE~H 206 (605)
+.|-||.-
T Consensus 104 --------~~l~iEiK 111 (234)
T 1o1z_A 104 --------KIINIEIK 111 (234)
T ss_dssp --------SEEEEEEC
T ss_pred --------CeEEEEeC
Confidence 44566665
|
| >2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.014 Score=58.28 Aligned_cols=66 Identities=17% Similarity=0.282 Sum_probs=51.0
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCC---cccc-------------------------c-chHHHHHH
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG---TMTA-------------------------P-VELIKCLR 185 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~---Tlts-------------------------~-i~f~dvi~ 185 (605)
=+-|.++|..|+..||..||+|++=-.| +.|||.|-. |+.. + .+|+||++
T Consensus 22 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~~~~l~Rtt~~~g~v~~~t~~eL~~l~~~~~~~iptL~evl~ 100 (258)
T 2o55_A 22 PENTLRSFVLCMERNIPYIETDLRVCKT-GEIVLFHGTPEGTIPFYKDGTSRIGDLSLEELKRLDVGGGHTIPSLEELFV 100 (258)
T ss_dssp CTTCHHHHHHHHHTTCCEEEEEEEECTT-SCEEECCCSTTSBCTTSTTTTCBGGGSCHHHHTTCBSSSSCBCCBHHHHHH
T ss_pred CccHHHHHHHHHHcCcCEEEEEEEEecC-CeEEEEeCCCCccceeeCCCCeehhhCcHHHHhhcCCCCCCccCCHHHHHH
Confidence 4779999999999999999999996445 479999999 8731 2 36899999
Q ss_pred HHhhhhhccCCCceEEEeccC
Q 007399 186 SIKEYAFVASEYPVVITLEDH 206 (605)
Q Consensus 186 aI~~~AF~~S~yPvIlSlE~H 206 (605)
.++++. .-+.|-||.-
T Consensus 101 ~~~~~~-----~~~~l~iEiK 116 (258)
T 2o55_A 101 AIEEQK-----FNLKLNLELK 116 (258)
T ss_dssp HHHHSC-----SCCEEEEEEC
T ss_pred Hhhhhc-----CceEEEEEEc
Confidence 888752 2355666654
|
| >3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.023 Score=57.81 Aligned_cols=64 Identities=20% Similarity=0.320 Sum_probs=51.1
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc--c-----------------------------c-chH
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--A-----------------------------P-VEL 180 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt--s-----------------------------~-i~f 180 (605)
..-+.|.++|..|+..||..||+|++--.| +.|||.|-.|+. + + -+|
T Consensus 29 ~~pENTl~af~~A~~~g~d~iE~Dv~~TkD-g~~vv~HD~~l~r~t~~~g~v~~~t~~el~~l~~~~~~~~~~~~~iptL 107 (278)
T 3i10_A 29 SAPENSTAAIDSAIAMKVDIVEIDIQKTKD-GQLILMHDNTLDRTTTGKGEIKNWTLADIKKLKLKDKDGKVTNYVVPTL 107 (278)
T ss_dssp TSCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBSTTTBSCCSBGGGSCHHHHTTSCBBCTTSCBCSCCCCBH
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEECCC-CeEEEecCcchhhcCCCCceeecCcHHHHhcCCCCCCCcccCCCCCCCH
Confidence 446889999999999999999999997655 479999987763 1 2 348
Q ss_pred HHHHHHHhhhhhccCCCceEEEecc
Q 007399 181 IKCLRSIKEYAFVASEYPVVITLED 205 (605)
Q Consensus 181 ~dvi~aI~~~AF~~S~yPvIlSlE~ 205 (605)
+||++.++. .++|-||.
T Consensus 108 ~evl~~~~~--------~~~~nie~ 124 (278)
T 3i10_A 108 EEALLTAKG--------KIMVNLDK 124 (278)
T ss_dssp HHHHHHHTT--------TSEEEEES
T ss_pred HHHHHHhcC--------CeEEEEec
Confidence 888887764 37888885
|
| >2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.012 Score=58.78 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=34.8
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
..-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+
T Consensus 23 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l 63 (252)
T 2pz0_A 23 NVPENTIAAFKRAMELGADGIELDVQLTKD-GHLVVIHDETV 63 (252)
T ss_dssp TSCTTSHHHHHHHHHHTCSEEEEEEEECTT-CCEEECSSSBS
T ss_pred CCCcchHHHHHHHHHcCCCEEEEEEEEecC-CeEEEEcCCcc
Confidence 345789999999999999999999996445 47999999886
|
| >3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.041 Score=55.19 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+.
T Consensus 21 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 61 (272)
T 3ch0_A 21 LPENTIAAFTKALLLGVTTLEFDLVISKD-NRVVVSHDTFFH 61 (272)
T ss_dssp SSTTSHHHHHHHHHHTCSEEEEEEEECTT-CCEEECSSSBCC
T ss_pred CCcccHHHHHHHHHcCCCEEEEeeeEcCC-CcEEEeCCCccc
Confidence 45789999999999999999999996555 479999998873
|
| >3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=95.29 E-value=0.065 Score=55.06 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=35.0
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
..-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||
T Consensus 29 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~~Vv~HD~~l 69 (313)
T 3l12_A 29 VMPENTLEGFAFTLAAGVRALEFDVVMTAD-GVPVVTHNHHL 69 (313)
T ss_dssp TSCTTCHHHHHHHHHTTCCEEEEEEEECTT-SCEEECSSSBC
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEECCchh
Confidence 345789999999999999999999996555 47999998875
|
| >3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.037 Score=56.57 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+-|.++|..|+..||..||+|||--.| +.+||.|-.|+.
T Consensus 46 pENTl~af~~A~~~g~d~iE~Dv~~TkD-g~~Vv~HD~~l~ 85 (292)
T 3mz2_A 46 PENSMETFENTLSYTPATFEIDPRLTKD-SVIVLFHDDTLE 85 (292)
T ss_dssp CTTCHHHHHHHHHHCCCEEEECEEECTT-CCEEECCSSSST
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeECCC-CcEEEECCchhc
Confidence 4789999999999999999999997655 479999987663
|
| >1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3 | Back alignment and structure |
|---|
Probab=93.86 E-value=0.05 Score=54.02 Aligned_cols=41 Identities=27% Similarity=0.335 Sum_probs=35.1
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.=+-|.++|..|+..||..||+|++=-.| +.|||.|-.|+.
T Consensus 14 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 54 (248)
T 1zcc_A 14 APENTFAAADLALQQGADYIELDVRESAD-GVLYVIHDETLD 54 (248)
T ss_dssp SCSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBTT
T ss_pred CCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCccc
Confidence 34789999999999999999999996445 479999999874
|
| >3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A | Back alignment and structure |
|---|
Probab=93.72 E-value=0.36 Score=57.47 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=67.7
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCc-ceeeccccCCCCCCeeccEEEEeeec---CCccEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL 550 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~-~k~kTkvv~nn~NPvWNEtf~F~v~~---pela~L 550 (605)
...+.|+|.++.++..+ .....+.||++.+......- ...+|+.+. ..+|.|||.++|++.. |-.|.|
T Consensus 354 ~~~f~v~i~~~~~~n~~-------~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL 425 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVN-------IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARL 425 (1091)
T ss_dssp CSEEEEEEEEESCCCCC-------CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEE
T ss_pred CCCEEEEEEEecCCCCC-------ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEE
Confidence 35689999999877431 11235679999987432222 223454333 3478899999999864 555899
Q ss_pred EEEEEeccCC----CCCCccEEEEEECC----ccCCccEEEEc
Q 007399 551 RIEVHEYDMS----EKDDFGGQTCLPVS----ELKQGIRAVPL 585 (605)
Q Consensus 551 rf~V~D~D~~----~~ddflGq~~lpL~----sLr~GyR~IpL 585 (605)
.|+||+.... .....+|++.++|- .|++|-..+.|
T Consensus 426 ~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~l 468 (1091)
T 3hhm_A 426 CLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNL 468 (1091)
T ss_dssp EEEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEEC
T ss_pred EEEEEEecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEe
Confidence 9999986532 12358999999986 47788765544
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=93.29 E-value=0.07 Score=51.41 Aligned_cols=100 Identities=11% Similarity=0.159 Sum_probs=60.6
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHH---HHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCC
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLI---EVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~---~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~ 97 (605)
...++..+|..|-.+ +.++.++|+.+|. ...+. ..+.+++.+++.+.-.. .+..+.+.+++++|..+|.+..
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~-~~~~~~~~~~~~~~f~~--~D~d~dG~I~~~EF~~~~~~~~ 196 (226)
T 2zfd_A 120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGM-NLKDTVIEDIIDKTFEE--ADTKHDGKIDKEEWRSLVLRHP 196 (226)
T ss_dssp HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHH--HCSSCSSEECHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHH--hCCCCCCcCcHHHHHHHHHhCh
Confidence 356799999999644 8999999999997 34565 47888888887643211 1112346799999999998732
Q ss_pred C--CCCCCCCCcccCCCCcccceeeeccCccc
Q 007399 98 N--PPLSPTPVVHHDMTAPVSHYFIYTGHNSY 127 (605)
Q Consensus 98 n--~~~~~~~~v~qDM~~PLs~YfI~SSHNTY 127 (605)
. ..+. .....+.+.+...|...|.||||
T Consensus 197 ~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~ 226 (226)
T 2zfd_A 197 SLLKNMT--LQYLKDITTTFPSFVFHSQVEDT 226 (226)
T ss_dssp GGGGGGC--CGGGGGHHHHC------------
T ss_pred HHHHHhc--hHHhhchhhcchhHHhhhhhccC
Confidence 1 1122 34567888999999999999987
|
| >2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* | Back alignment and structure |
|---|
Probab=92.86 E-value=0.33 Score=57.15 Aligned_cols=102 Identities=18% Similarity=0.205 Sum_probs=67.5
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeec---CCccEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL 550 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~---pela~L 550 (605)
...+.|+|.++.++... ...+.||++.+...... +....|+.+.-..+|.|||-++|++.. |--|.|
T Consensus 216 ~~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L 286 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---------ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARL 286 (940)
T ss_dssp CSEEEEEEEEEECCCC------------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEE
T ss_pred CCceEEEEEEecccCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEE
Confidence 45699999999987431 23467999888632211 112345444435679999999999875 445899
Q ss_pred EEEEEeccCC--C----------CCCccEEEEEECCc----cCCccEEEEc
Q 007399 551 RIEVHEYDMS--E----------KDDFGGQTCLPVSE----LKQGIRAVPL 585 (605)
Q Consensus 551 rf~V~D~D~~--~----------~ddflGq~~lpL~s----Lr~GyR~IpL 585 (605)
.|+||+.... + ....+|++.+||-. |++|...+.|
T Consensus 287 ~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~l 337 (940)
T 2wxf_A 287 CFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYM 337 (940)
T ss_dssp EEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEEC
T ss_pred EEEEEEecCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEE
Confidence 9999986421 1 13489999999865 6788766555
|
| >3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.86 E-value=2.2 Score=41.72 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=43.3
Q ss_pred ceeeccccCCCCCCeeccEEEEeeecCC--ccEEEEEEEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcc
Q 007399 519 VMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERY 593 (605)
Q Consensus 519 ~k~kTkvv~nn~NPvWNEtf~F~v~~pe--la~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l 593 (605)
..++|-+...+-+|.|+|++...+.... .+-|+|+++......+.|- ..-.-||-|+||++.+|..+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk--------~E~pfg~a~lPL~~~dG~~L 145 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDK--------SEKIFALAFVKLMRYDGTTL 145 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCC--------CCCEEEEEEEESBCTTSCBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccc--------cCCeeEEEEEEcccCCCcEE
Confidence 3467777777889999999998876544 3789999987543222110 00123666666666666644
|
| >1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A* | Back alignment and structure |
|---|
Probab=92.26 E-value=0.063 Score=54.18 Aligned_cols=36 Identities=19% Similarity=0.062 Sum_probs=33.5
Q ss_pred CCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCc
Q 007399 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (605)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 173 (605)
+-|.++|..|+..||..||+||+= .| +.|||.|=.|
T Consensus 14 ENTl~Af~~A~~~Gad~IE~DV~l-kD-G~lVv~HD~~ 49 (285)
T 1xx1_A 14 VNAVAQIPDFLDLGANALEADVTF-KG-SVPTYTYHGT 49 (285)
T ss_dssp CCSTTHHHHHHHHTCSEEEEEEEE-ET-TEEEEEECCS
T ss_pred hccHHHHHHHHHhCCCEEEEEEEE-EC-CEEEEEcCCc
Confidence 889999999999999999999998 77 4799999988
|
| >1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A | Back alignment and structure |
|---|
Probab=91.51 E-value=0.15 Score=53.34 Aligned_cols=42 Identities=21% Similarity=0.219 Sum_probs=35.9
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
.=+-|.++|..|+..||..||+||+=-.| +.|||.|-.||..
T Consensus 43 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~r 84 (356)
T 1ydy_A 43 LPEHTLPAKAMAYAQGADYLEQDLVMTKD-DNLVVLHDHYLDR 84 (356)
T ss_dssp SSTTCHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBCTT
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeEECCC-CcEEEeCCChHHh
Confidence 44789999999999999999999996555 4799999998743
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=91.33 E-value=0.82 Score=37.67 Aligned_cols=64 Identities=17% Similarity=0.317 Sum_probs=49.6
Q ss_pred hHHHHHHHHhhCC-C---CcCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSEN-G---TMTVDHLHRFLIEV----QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~~-~---~~~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|..+|..|..+ + .|+.++|+.+|+.+ -+. ..+.+.+.++|..+-. .+.+.+++++|..++..
T Consensus 9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~-~~~~~~v~~~~~~~D~------d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE-IKEQEVVDKVMETLDS------NGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCC-CCSHHHHHHHHHHHCT------TSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccC-cccHHHHHHHHHHHcC------CCCCCCcHHHHHHHHHH
Confidence 4788999999833 4 99999999999973 223 4678889999988652 13468999999998765
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=91.22 E-value=1 Score=37.06 Aligned_cols=67 Identities=15% Similarity=0.329 Sum_probs=52.9
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.....++..+|..|-.+ +.++.++|+..|+... . ..+.+++..++..+... ..+.+++++|..++.+
T Consensus 25 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-~-~~~~~e~~~l~~~~D~d------~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 25 TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLG-E-KLTDEEVDEMIREADID------GDGQVNYEEFVQMMTA 93 (94)
T ss_dssp CSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHT-C-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHhc
Confidence 44677899999999643 8899999999999764 3 46888999998887521 3467999999998764
|
| >2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A | Back alignment and structure |
|---|
Probab=91.20 E-value=0.18 Score=51.03 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=34.1
Q ss_pred CCCCChHHHHHH-HhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRA-LQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~a-L~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.=+-|.++|..| +..||..||+|++=-.| +.|||.|-.|+
T Consensus 36 ~PENTl~Af~~A~~~~Gad~iE~DV~lTkD-G~lVv~HD~~l 76 (287)
T 2oog_A 36 APEHTFQAYDKSHNELKASYIEIDLQRTKD-GHLVAMHDETV 76 (287)
T ss_dssp SCSSSHHHHHHHHHTSCCSEEEEEEEECTT-CCEEECSSSBS
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCChh
Confidence 347899999999 68999999999996445 47999999987
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=91.06 E-value=0.59 Score=40.70 Aligned_cols=64 Identities=14% Similarity=0.330 Sum_probs=51.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..++..+|..|-.+ +.|+.++|+.+|....+. ..+.+.+..++..+... +.+.+++++|..+|.
T Consensus 87 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~d~~------~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGH-QVGHRDIEEIIRDVDLN------GDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSS-CCCHHHHHHHHHHHCSS------SSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcC-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHh
Confidence 46788999999643 899999999999986666 47889999999987521 346799999999864
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=90.50 E-value=0.65 Score=39.65 Aligned_cols=64 Identities=13% Similarity=0.202 Sum_probs=50.5
Q ss_pred hHHHHHHHHhh-C--C-CCcCHHHHHHHHHHHc----CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYS-E--N-GTMTVDHLHRFLIEVQ----KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~-~--~-~~~~~~~~~~Fl~~~Q----~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|..+|+.|. . + +.|+.++|+.+|+.+= ++ ..+.+.+.+||..+-. .+.+.+++++|+.+|..
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~-~~~~~ev~~~i~~~D~------dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPT-EFRECDYNKFMSVLDT------NKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCC-TTCHHHHHHHHHHHHH------CCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCC-CCCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHHH
Confidence 57899999997 2 3 6899999999998642 33 4678899999988652 23478999999998876
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.80 E-value=1.2 Score=38.05 Aligned_cols=65 Identities=15% Similarity=0.317 Sum_probs=49.6
Q ss_pred hHHHHHHHHhh-C-C--CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYS-E-N--GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~-~-~--~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|..+|..|. . + .+|+.++|+.+|+.+=++ ...+.+.+.+||..+-. ...+.+++++|+.+|..
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~------dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDS------NRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcC------CCCCCCcHHHHHHHHHH
Confidence 57889999997 2 2 489999999999964321 13578889999988642 23478999999998865
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=89.73 E-value=0.5 Score=43.43 Aligned_cols=69 Identities=12% Similarity=0.262 Sum_probs=50.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhch-h-hhccCCCCHHHHHHHHccC
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHL-N-IFQRRGLNLEAFFKYLFGD 96 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~-~-~~~~~~l~~~gF~~~L~s~ 96 (605)
..++..+|..|-.+ +.++.++|+.+|. +. .++.+++..++..+...... . ....+.+++++|..+|.+.
T Consensus 107 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~---~~-~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~~ 179 (180)
T 3mse_B 107 STFLKAAFNKIDKDEDGYISKSDIVSLVH---DK-VLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLST 179 (180)
T ss_dssp -CHHHHHHHHHCTTCSSCBCHHHHHHHTT---TS-SCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHc---CC-CCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHhc
Confidence 46899999999643 8999999999998 33 57899999999988632110 0 0012679999999999863
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.10 E-value=0.29 Score=45.76 Aligned_cols=70 Identities=14% Similarity=0.165 Sum_probs=52.7
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
...++..+|..|-.+ +.|+.++|+.+|....+. .++.+++..++...-.. .+..+.+.+++++|..+|.+
T Consensus 112 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-~~~~~~~~~~~~~~~~~--~D~d~dG~Is~~EF~~~~~~ 183 (202)
T 2bec_A 112 RRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV-QVTEEQLENIADRTVQE--ADEDGDGAVSFVEFTKSLEK 183 (202)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCS-CCCHHHHHHHHHHHHHH--HCSSCSSSEEHHHHHHTTTT
T ss_pred HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHH--cCCCCCCcCcHHHHHHHHHH
Confidence 456788999999644 889999999999986455 47888999998872210 01123467999999999987
|
| >2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=89.08 E-value=0.42 Score=57.07 Aligned_cols=103 Identities=16% Similarity=0.120 Sum_probs=65.0
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCCc---cEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALL 550 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~L 550 (605)
...+.|+|.++.++... ...+.||++.+...... +....|+.+.-..+|.|||-++|++...++ |.|
T Consensus 352 ~~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L 422 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARL 422 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEE
T ss_pred CCCEEEEEEEeccCCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEE
Confidence 35699999999887431 23467888877532111 112345544435679999999999875554 899
Q ss_pred EEEEEeccCC----------------------CCCCccEEEEEECCc----cCCccEEEEcc
Q 007399 551 RIEVHEYDMS----------------------EKDDFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 551 rf~V~D~D~~----------------------~~ddflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
.|+||+.... .....+|++.+||-. |++|...+.|.
T Consensus 423 ~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw 484 (1092)
T 2y3a_A 423 CFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSW 484 (1092)
T ss_dssp EEECCCC------------------------------CCEEEEESBCTTCBBCCEEEECCCC
T ss_pred EEEEEEecCccccccccccccccccccccccccccceeEEEeeeeECCcCcccCCCeEEEEe
Confidence 9999985311 012388899888764 67887665553
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=89.08 E-value=0.86 Score=35.52 Aligned_cols=63 Identities=14% Similarity=0.360 Sum_probs=50.1
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
+.++..+|..|-.+ +.++.++|+..|+... ..+.+++..++..+... +.+.+++++|..++..
T Consensus 2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g---~~~~~~~~~~~~~~D~~------~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDTD------GDGFIDFNEFISFCNA 66 (78)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH---TCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC---CCCHHHHHHHHHHhCCC------CCCeEcHHHHHHHHHH
Confidence 35789999999643 8899999999999875 46888899998877521 3467999999999875
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=89.06 E-value=1.4 Score=36.73 Aligned_cols=65 Identities=15% Similarity=0.307 Sum_probs=48.6
Q ss_pred hHHHHHHHHhh-CC---CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYS-EN---GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~-~~---~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|..+|+.|. .+ ++|+.++|+.+|+.+=++ ...+.+.+.++|..+-. .+.+.+++++|..+|..
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~------d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS------NRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCT------TSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCC------CCCCCCcHHHHHHHHHH
Confidence 57899999997 22 499999999999863221 12478889999988642 23478999999998764
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=88.78 E-value=0.79 Score=34.26 Aligned_cols=62 Identities=16% Similarity=0.349 Sum_probs=48.5
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
++..+|..|-.+ +.++.++|...|.... . ..+.+.+..++..+... +.+.+++++|..++..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~D~~------~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFS-P-YFTQEDIVKFFEEIDVD------GNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTC-T-TSCHHHHHHHHHHHCCS------SSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHHH
Confidence 578899998643 8999999999998753 3 46888889998887521 2367999999998864
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=88.75 E-value=0.93 Score=37.77 Aligned_cols=67 Identities=13% Similarity=0.239 Sum_probs=52.1
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....++..+|..|-.+ +.++.++|+.+|.... +. ..+.+++..++..+... +.+.+++++|..++.+
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 109 (109)
T 1bu3_A 39 KSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGAR-ALTDAETKAFLKAGDSD------GDGAIGVDEWAALVKA 109 (109)
T ss_dssp SCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCC-CCCHHHHHHHHHHHCTT------CSSEECHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHhC
Confidence 3567899999999644 8899999999999873 33 46888999998887521 2367999999998864
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.41 E-value=0.8 Score=38.70 Aligned_cols=63 Identities=14% Similarity=0.254 Sum_probs=48.8
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..||+.+|+.|=.+ +.++.++|+..|+.. +. ..+.+++.+|+..+-.. +.+.+++++|+..|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~l-g~-~~~~~ei~~l~~~~D~d------~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GY-MPNEVELEVIIQRLDMD------GDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH-TC-CCCTTTHHHHHHHHCSS------CSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHHCCC------CCCeEeHHHHHHHhC
Confidence 45688889998533 899999999999875 44 46788899999887521 346799999998763
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=88.41 E-value=1.3 Score=38.72 Aligned_cols=71 Identities=15% Similarity=0.199 Sum_probs=53.3
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....++..+|..|-.+ +.|+.++|+.+|....+. ..+.+.+..++..+-.. ....+.+.+++++|..+|.+
T Consensus 72 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~~~~--~D~~~dg~i~~~eF~~~~~~ 144 (155)
T 3ll8_B 72 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQIVDKTIIN--ADKDGDGRISFEEFCAVVGG 144 (155)
T ss_dssp CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG-GSCHHHHHHHHHHHHHH--HCTTSSSSBCHHHHHHHHGG
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHH--hCCCCCCcCcHHHHHHHHhc
Confidence 3456889999999644 899999999999985555 47888899998873211 01123467999999999987
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=87.94 E-value=2.5 Score=34.01 Aligned_cols=64 Identities=13% Similarity=0.262 Sum_probs=49.8
Q ss_pred chHHHHHHHHhh-CC--C-CcCHHHHHHHHHH-----HcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 24 PDAVKSMFDQYS-EN--G-TMTVDHLHRFLIE-----VQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 24 r~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~-----~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..++..+|..|- .+ + .++.++|+..|.. ... ..+.+.+..++..+... ..+.+++++|..++.
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~--~~~~~~~~~~~~~~D~d------~dg~i~~~eF~~~~~ 79 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDV--QKDADAVDKIMKELDEN------GDGEVDFQEFVVLVA 79 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHC--CCCHHHHHHHHHHHHHC------TTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCC--CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHH
Confidence 357889999996 34 6 8999999999987 433 36888899999887522 246799999998876
Q ss_pred c
Q 007399 95 G 95 (605)
Q Consensus 95 s 95 (605)
.
T Consensus 80 ~ 80 (93)
T 1k2h_A 80 A 80 (93)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=87.50 E-value=0.98 Score=37.55 Aligned_cols=67 Identities=16% Similarity=0.248 Sum_probs=51.1
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....++..+|..|-.+ +.++.++|+.+|.... +. ..+.+++..++..+... +.+.+++++|..++.+
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 108 (108)
T 2pvb_A 38 KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSAR-ALTDAETKAFLADGDKD------GDGMIGVDEFAAMIKA 108 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHhC
Confidence 3567889999999643 8899999999998652 33 46888899998887521 3467999999998753
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=87.37 E-value=1.6 Score=38.92 Aligned_cols=64 Identities=19% Similarity=0.396 Sum_probs=48.5
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
+.++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+... +.+.+++++|..+|..
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKEL-GE-NLTEEELQEMIAEADRN------DDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCCS------SSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CC-CCCHHHHHHHHHHhCCC------CCCCEeHHHHHHHHHh
Confidence 45677888888633 889999999999864 33 47888899898887521 3467999999999875
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=87.08 E-value=1.2 Score=37.06 Aligned_cols=67 Identities=13% Similarity=0.243 Sum_probs=52.8
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....++..+|+.|-.+ +.++.++|+..|.... +. ..+.+.+..++..+... +.+.+++++|..+|.+
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-DLNDTETKALLAAGDSD------HDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHh
Confidence 4567899999999643 8899999999999763 44 47888999998887521 3467999999998853
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=86.93 E-value=1.8 Score=37.83 Aligned_cols=64 Identities=14% Similarity=0.344 Sum_probs=49.5
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|..|-.+ +.++.++|+.+|... ++ ..+.+.+..++..+... ..+.+++++|..+|.+
T Consensus 82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~d------~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNL-GE-KLTDDEVDEMIREADID------GDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCSS------SSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHcc
Confidence 45677889888533 889999999999865 33 47888999998887521 3467999999999875
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.90 E-value=0.58 Score=41.42 Aligned_cols=64 Identities=14% Similarity=0.368 Sum_probs=48.7
Q ss_pred hHHHHHHHHhhCC-CCcCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSEN-GTMTVDHLHRFLIEV----QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~~-~~~~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|..+|++|..+ ++|+.++|+..|+.+ =++ ..+.+.+.+||...-. .+.+.+++++|..+|..
T Consensus 15 e~l~~~F~~yd~ddG~Is~~EL~~~l~~~~~~~l~~-~~~~~~v~~~i~~~D~------d~DG~IdF~EF~~lm~~ 83 (121)
T 4drw_A 15 ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLEN-QKDPLAVDKIMKDLDQ------CRDGKVGFQSFFSLIAG 83 (121)
T ss_dssp HHHHHTTGGGSCTTCSCCHHHHHHHTTTSCHHHHTT-SSCTTHHHHHHHHHCT------TCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEcHHHHHHHHHHHhhhhccc-CCCHHHHHHHHHHHcC------CCCCcCcHHHHHHHHHH
Confidence 4577889999876 999999999999752 022 3567788899887642 24578999999998875
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=86.29 E-value=1.3 Score=38.12 Aligned_cols=64 Identities=19% Similarity=0.421 Sum_probs=51.3
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
...++..+|..|-.+ +.++.++|+.+|.... . ..+.+++..++..+. . ..+.+++++|..+|.+
T Consensus 74 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~~~~~~d------~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLG-E-KLSNEEMDELLKGVP------V-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHH-S-CSCHHHHHHHHHHTT------C-SSCCSTTTHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC-C-CCCHHHHHHHHHhcc------C-CCCcEeHHHHHHHHhc
Confidence 347899999999644 8899999999999763 3 368889999988764 2 3478999999999874
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=86.14 E-value=1.9 Score=37.96 Aligned_cols=64 Identities=17% Similarity=0.419 Sum_probs=49.2
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|..+-.+ +.|+.++|+.+|... +. ..+.+++..++..+... +.+.+++++|..+|.+
T Consensus 95 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-g~-~~~~~~~~~~~~~~d~~------~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 95 EEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVTEEDIEDLMKDSDKN------NDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-TC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHhh
Confidence 45688889988643 889999999999764 33 47888899998887521 3467999999999874
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=86.11 E-value=1.6 Score=35.09 Aligned_cols=64 Identities=20% Similarity=0.401 Sum_probs=49.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|..|-.+ +.++.++|+.+|+... . ..+.+.+..++..+... +.+.+++++|..++..
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~l~~~~D~~------~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLG-Q-NPTKEELDAIIEEVDED------GSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCTT------CCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHHH
Confidence 34677889988643 8899999999998753 3 46888899998887521 2467999999988764
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=86.05 E-value=0.92 Score=39.60 Aligned_cols=64 Identities=13% Similarity=0.362 Sum_probs=51.9
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....++..+|..|-.+ +.++.++|+.+|... +. ..+.+++..++..+ + +.+.+++++|..+|.+
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~-d-------~dg~i~~~eF~~~l~~ 146 (146)
T 2qac_A 81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTW-GD-ALTDQEAIDALNAF-S-------SEDNIDYKLFCEDILQ 146 (146)
T ss_dssp CCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHH-C-------SSSEEEHHHHHHHHTC
T ss_pred chHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHc-C-------CCCcCcHHHHHHHHhC
Confidence 3567899999999643 789999999999864 44 47899999999988 2 2367999999999864
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=85.44 E-value=1.5 Score=36.44 Aligned_cols=66 Identities=17% Similarity=0.317 Sum_probs=50.9
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
....++..+|+.|-.+ +.++.++|+..|.... +. ..+.+.+..++..+... +.+.+++++|..+|.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~~~~D~~------~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 39 KTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSAR-VLTSAETKAFLAAGDTD------GDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHT
T ss_pred CcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccc-cCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHh
Confidence 4567889999999644 8899999999998652 33 47888899998887521 346799999999875
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=85.39 E-value=2.3 Score=39.34 Aligned_cols=71 Identities=10% Similarity=0.129 Sum_probs=54.2
Q ss_pred cCccCCCCchHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHH
Q 007399 16 FHVAASEAPDAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (605)
Q Consensus 16 ~~~~~~~~r~ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (605)
+++.....+.+|..+|..+- .+ +.++.++|..+|. ..+ ...+.+.+..++..+... +.+.+++++|..++
T Consensus 18 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~-~~~-~~~~~~~~~~l~~~~D~d------~dG~I~~~EF~~~~ 89 (191)
T 1y1x_A 18 PSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALS-SAG-VPFSLATTEKLLHMYDKN------HSGEITFDEFKDLH 89 (191)
T ss_dssp TTCCSSCTTSCHHHHHHHHCTTCSSSBCHHHHHHHHC-BTT-BCCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHH
T ss_pred CcccccCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH-HcC-CCCCHHHHHHHHHHhCCC------CCCeEcHHHHHHHH
Confidence 45566777899999999995 33 8999999999993 222 246888899898877521 34679999999887
Q ss_pred c
Q 007399 94 F 94 (605)
Q Consensus 94 ~ 94 (605)
.
T Consensus 90 ~ 90 (191)
T 1y1x_A 90 H 90 (191)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=85.30 E-value=0.68 Score=38.57 Aligned_cols=67 Identities=16% Similarity=0.328 Sum_probs=51.0
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....++..+|..|-.+ +.++.++|+.+|.... +. ..+.+++..++..+... +.+.+++++|..+|.|
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~s 108 (108)
T 1rro_A 38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR-ELTESETKSLMDAADND------GDGKIGADEFQEMVHS 108 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC-CCCHHHHHHHHHHHCCS------SSSSEEHHHHHHHHTC
T ss_pred ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccC-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHcC
Confidence 3567889999999643 7899999999998653 33 46888888888877521 2467999999998864
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=85.21 E-value=1.8 Score=35.86 Aligned_cols=67 Identities=16% Similarity=0.270 Sum_probs=52.2
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....++..+|+.|-.+ +.++.++|+.+|...- +. ..+.+++..++..+... ..+.+++++|..++.+
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR-DLSAKETKTLMAAGDKD------GDGKIGVEEFSTLVAE 108 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHHT
T ss_pred chHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCC-CCCHHHHHHHHHHHCCC------CCCcCCHHHHHHHHHc
Confidence 4567899999999643 8899999999999872 33 46888899998887521 3467999999998763
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=85.16 E-value=3.4 Score=34.86 Aligned_cols=65 Identities=11% Similarity=0.248 Sum_probs=47.7
Q ss_pred hHHHHHHHHhhC----C-CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSE----N-GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~----~-~~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|..+|+.|.. + +.++.++|+..|+..=++. ..+.+.+.++|..+-. .+.+.+++++|..+|..
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~------d~DG~Idf~EF~~~m~~ 83 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDA------NHDGRISFDEYWTLIGG 83 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCC------CSSCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCC------CCCCCCcHHHHHHHHHH
Confidence 578999999964 2 7999999999998753331 1125677888776541 23468999999998865
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=85.15 E-value=2 Score=37.31 Aligned_cols=66 Identities=15% Similarity=0.312 Sum_probs=48.6
Q ss_pred chHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..+|..+|..|- .+ . .|+.++|+..|+.+-++ ...+.+++.+||..+-. ...+.+++++|+.+|..
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~------dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS------NRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCS------SSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHHH
Confidence 357888999997 33 4 89999999999864221 13467788889887642 13467999999988765
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=85.10 E-value=1.5 Score=39.08 Aligned_cols=66 Identities=9% Similarity=0.167 Sum_probs=52.3
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccC
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (605)
...++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+.. .+.+.+++++|..+|.+.
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~------d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-GG-RFTPEEIKNMWAAFPP------DVAGNVDYKNICYVITHG 160 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHc-CC-CCCHHHHHHHHHhcCC------CCCCeEeHHHHHHHHHhc
Confidence 457889999999643 889999999999864 44 4788899999887642 134679999999999873
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=84.98 E-value=3.1 Score=35.57 Aligned_cols=65 Identities=15% Similarity=0.265 Sum_probs=48.6
Q ss_pred hHHHHHHHHhhC-C--C-CcCHHHHHHHHHHHcCCC---C-CCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSE-N--G-TMTVDHLHRFLIEVQKED---K-ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~-~--~-~~~~~~~~~Fl~~~Q~~~---~-~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|..+|..|.. + . .|+.++|+..|+..=+.. . .+.+.+..||..+-. .....+++++|+.++..
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~------d~dG~I~f~EF~~~~~~ 84 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDT------NADKQLSFEEFIMLMAR 84 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCC------CCCCCEeHHHHHHHHHH
Confidence 578889999983 4 6 899999999998433331 1 477888888887642 13467999999988765
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=84.56 E-value=1.7 Score=36.05 Aligned_cols=67 Identities=12% Similarity=0.244 Sum_probs=52.1
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....++..+|..|-.+ +.++.++|+.+|...- +. ..+.+.+..++..+... ..+.+++++|..++.+
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~-~~~~~~~~~~~~~~d~~------~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 39 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR-DLTDAETKAFLKAADKD------GDGKIGIDEFETLVHE 109 (110)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHHC
T ss_pred chHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHhCCC------CCCeEcHHHHHHHHHh
Confidence 4567899999999643 8999999999998652 33 46888899999887521 3467999999998764
|
| >1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11 | Back alignment and structure |
|---|
Probab=84.47 E-value=4.5 Score=35.97 Aligned_cols=65 Identities=12% Similarity=0.135 Sum_probs=52.8
Q ss_pred chHHHHHHHHhhC--C---CCcCHHHHHHHHHHHcCC--CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSE--N---GTMTVDHLHRFLIEVQKE--DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~--~---~~~~~~~~~~Fl~~~Q~~--~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
-.+|+.+|..|+. . ..|+..+|.+++++.+=- ..+|..++.-|+.++ .. ..+.|++++|..+|-.
T Consensus 21 ~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k------~~r~I~f~qF~~aL~~ 92 (125)
T 1pul_A 21 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TG------PKKKATFDETKKVLAF 92 (125)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TC------SSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cC------CcceecHHHHHHHHHH
Confidence 3689999999984 1 689999999999998865 357899999999998 32 1356999999988754
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=84.16 E-value=2.4 Score=36.56 Aligned_cols=65 Identities=18% Similarity=0.297 Sum_probs=51.2
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....++..+|..|-.+ +.++.++|+.+|... +. ..+.+++..++.. . . ...+.+++++|..+|.+
T Consensus 82 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~-d-~-----~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 82 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL-GE-KMTEEEVEELMKG-Q-E-----DSNGCINYEAFVKHIMS 148 (149)
T ss_pred chHHHHHHHHHHhCCCCCceEcHHHHHHHHHHh-CC-CCCHHHHHHHHhh-C-C-----CCCCcEeHHHHHHHHhc
Confidence 4567889999999643 889999999999875 44 4788889999887 3 2 13467999999999875
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=84.06 E-value=1.9 Score=34.70 Aligned_cols=64 Identities=20% Similarity=0.412 Sum_probs=50.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|..|-.+ +.|+.++|+..|... +. ..+.+++..++..+... ..+.+++++|..++..
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~l~~~~d~~------~dg~i~~~eF~~~~~~ 73 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMINL-GE-KLTDEEVEQMIKEADLD------GDGQVNYEEFVKMMMT 73 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCSS------CCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHHh
Confidence 45788899998644 889999999999875 33 46888899998877521 3467999999999876
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.73 E-value=1.3 Score=38.06 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=47.5
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
+.++..+|..|-.+ +.|+.++|+.+|+ +. ..+.+++..|+..+.. .+.+.+++++|+.++..
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~-~~~~~~~~~i~~~~D~------d~dG~I~~~EF~~~~~~ 76 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILM---QS-SLPQAQLASIWNLSDI------DQDGKLTAEEFILAMHL 76 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TT-CCCHHHHHHHHHHHCS------SCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hC-CCCHHHHHHHHHHHCC------CCCCCCcHHHHHHHHHH
Confidence 56778889998643 8899999999998 33 4688888888887542 13467999999988755
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=83.71 E-value=1.3 Score=34.18 Aligned_cols=64 Identities=13% Similarity=0.276 Sum_probs=49.2
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|..|-.+ +.++.++|+..|+... . ..+.+.+..++..+... +.+.+++++|..++..
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~~~~~~~~~~d~~------~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALG-F-DVKKPEILELMNEYDRE------GNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHT-C-CCHHHHHHHHHHHHCCS------SSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHHH
Confidence 35688889998643 8899999999999863 3 36778888888877521 2356999999998865
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=83.70 E-value=1.6 Score=34.62 Aligned_cols=64 Identities=9% Similarity=0.263 Sum_probs=50.0
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccC
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (605)
..++..+|..|-.+ +.++.++|+..|.... ..+.+.+..++..+... +.+.+++++|..++...
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g---~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTD------GDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT---TCCHHHHHHHHHHHCTT------CSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC---CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHHC
Confidence 45678889988643 8899999999998653 46888899998887521 23679999999998763
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=83.53 E-value=2 Score=36.11 Aligned_cols=64 Identities=16% Similarity=0.067 Sum_probs=49.9
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..+.++..+|+.+-.+ +.++.++|+.+|+.. ..+.+++.+|+...-. .+.+.+++++|...|..
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----~l~~~~l~~i~~~~D~------d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKS----GLPDLILGKIWDLADT------DGKGVLSKQEFFVALRL 73 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS----SSCHHHHHHHHHHHCC------SSSSSCCSHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc----CCCHHHHHHHHHHHCC------CCCCcCCHHHHHHHHHH
Confidence 3467899999999643 899999999999753 3678888899887541 13467999999988764
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=83.48 E-value=1 Score=33.60 Aligned_cols=61 Identities=15% Similarity=0.286 Sum_probs=45.0
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 27 i~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
+..+|..+-.+ +.++.++|..+|+... . ..+.+.+..++..+... +.+.+++++|..++..
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~D~~------~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKR-A-IKNEQLLQLIFKSIDAD------GNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHH-H-HHHHHHHHHHHHHHCTT------CSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHcc-C-CCcHHHHHHHHHHHCCC------CCCCCCHHHHHHHHHh
Confidence 34678888543 8999999999998753 2 34567788888876521 3467999999998864
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=83.28 E-value=1.8 Score=38.16 Aligned_cols=66 Identities=9% Similarity=0.282 Sum_probs=52.7
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccC
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (605)
....++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..|+..+.. . .+.+++++|..+|.+.
T Consensus 84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~------~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 84 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENM-GD-NFNKDEMRMTFKEAPV------E-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHCCE------E-TTEECHHHHHHHHHTS
T ss_pred ChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHh-CC-CCCHHHHHHHHHhcCC------C-CCEEeHHHHHHHHhcC
Confidence 3567899999999643 889999999999875 44 4788999999887641 1 3679999999999874
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.23 E-value=1.9 Score=35.03 Aligned_cols=61 Identities=16% Similarity=0.354 Sum_probs=47.1
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..++..+|..|-.+ +.|+.++|+..|+... .+.+++..++..+... +.+.+++++|..++.
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~~~~~~~~~~~~~D~d------~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELR----VRPADAEAVFQRLDAD------RDGAITFQEFARGFL 88 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT----CCHHHHHHHHHHHCTT------CSSEECHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC----cCHHHHHHHHHHhCCC------CCCCEeHHHHHHHHH
Confidence 45678889998644 8999999999998642 5778888888877521 246799999998764
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=83.16 E-value=2.5 Score=34.87 Aligned_cols=66 Identities=9% Similarity=0.178 Sum_probs=49.7
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccC
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (605)
...+|..+|..|-.+ +.++.++|+..|.... . ..+.+++..++..+.. ...+.+++++|..+|.+.
T Consensus 22 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~-~~~~~e~~~l~~~~d~------~~~g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 22 HYHAITQEFENFDTMKTNTISREEFRAICNRRV-Q-ILTDEQFDRLWNEMPV------NAKGRLKYPDFLSRFSSE 89 (105)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHT-C-CCCHHHHHHHHTTSCB------CTTSCBCHHHHHHHHC--
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHcCC------CCCCCCcHHHHHHHHhcc
Confidence 356788999998643 8999999999998764 3 3688888888776531 134679999999999873
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=83.08 E-value=2.5 Score=37.15 Aligned_cols=60 Identities=12% Similarity=0.085 Sum_probs=48.3
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
++..+|..+-.+ +.|+.++|+.+|.... .+.+.+..++..+... +.+.+++++|..+|.+
T Consensus 99 ~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~----~~~~~~~~~~~~~D~d------~dg~i~~~ef~~~~~~ 160 (166)
T 3akb_A 99 FLHAALGVADTDGDGAVTVADTARALTAFG----VPEDLARQAAAALDTD------GDGKVGETEIVPAFAR 160 (166)
T ss_dssp HHHHHHHHHCSSSSSCCBHHHHHHHHHHTT----CCHHHHHHHHHHHCTT------CSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhC----CCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHH
Confidence 488899888643 8999999999998753 6888899999887521 3467999999999876
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A | Back alignment and structure |
|---|
Probab=83.07 E-value=1.7 Score=36.23 Aligned_cols=66 Identities=14% Similarity=0.344 Sum_probs=48.2
Q ss_pred chHHHHHHHHhh-CCCCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYS-ENGTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~-~~~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..+|..+|..|- .++.|+.++|+..|+..-+. ...+.+.+.+||..+-. .+.+.+++++|...|..
T Consensus 8 ~~~l~~~F~~fD~~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~------d~dG~I~f~EF~~~~~~ 77 (96)
T 1a4p_A 8 METMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQ------CRDGKVGFQSFFSLIAG 77 (96)
T ss_dssp HHHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCT------TSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHHH
Confidence 357889999997 34799999999999863211 12466778888887642 13467999999988764
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A | Back alignment and structure |
|---|
Probab=82.97 E-value=1.5 Score=33.74 Aligned_cols=65 Identities=11% Similarity=0.310 Sum_probs=49.1
Q ss_pred CchHHHHHHHHh-h--CC-CCcCHHHHHHHHHHHcCCCCC--CHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQY-S--EN-GTMTVDHLHRFLIEVQKEDKA--SKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~-~--~~-~~~~~~~~~~Fl~~~Q~~~~~--~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
+..++..+|..| - ++ +.++.++|+..|..... .. +.+.+..++..+... ..+.+++++|..++..
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~--~~~~~~~~~~~l~~~~D~~------~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP--SLLKGMSTLDEMIEEVDKN------GDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGG--GSCTTSCSHHHHHHHHCTT------CSSEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCC--CcCCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHHH
Confidence 567899999999 3 34 67999999999998742 34 666788888876421 2467999999988753
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=82.85 E-value=1.5 Score=39.94 Aligned_cols=64 Identities=14% Similarity=0.294 Sum_probs=50.6
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..+.++..+|..+-. + +.++.++|+.+|. +. ..+.+++..++..+... +.+.+++++|..+|.+
T Consensus 120 ~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~---~~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~ 185 (191)
T 3khe_A 120 LSRERLLAAFQQFDSDGSGKITNEELGRLFG---VT-EVDDETWHQVLQECDKN------NDGEVDFEEFVEMMQK 185 (191)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHHHTT---SS-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCCcCcCCHHHHHHHHc---cC-CCCHHHHHHHHHHhCCC------CCCCCCHHHHHHHHHH
Confidence 355788999999953 3 8899999999997 44 47888999999887522 3467999999999875
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=82.79 E-value=2 Score=37.03 Aligned_cols=62 Identities=16% Similarity=0.343 Sum_probs=44.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..++..+|..|-.+ +.++.++|+.+|... +. ..+.+.+..++..+. . +.+.+++++|..+|.
T Consensus 83 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d-~------~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSI-GE-KLTDAEVDEMLREVS-D------GSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHS-S------SCSSEEHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHc-CC-CCCHHHHHHHHHHhc-C------CCCcCcHHHHHHHHh
Confidence 35677788887433 788888888888753 33 467888888888764 2 236789999988764
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=82.61 E-value=4.1 Score=35.51 Aligned_cols=63 Identities=17% Similarity=0.372 Sum_probs=48.2
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..++...|..|-.+ +.++.++|+.+|... ++ ..+.+++.++|..+... +.+.+++++|..+|.
T Consensus 78 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~d------~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 78 KEEILKAFKLFDDDETGKISFKNLKRVAKEL-GE-NLTDEELQEMIDEADRD------GDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCTT------SSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHc
Confidence 35788889888533 889999999999764 44 47888999998876521 346799999998875
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=82.47 E-value=3.4 Score=36.41 Aligned_cols=66 Identities=17% Similarity=0.299 Sum_probs=51.8
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....+|..+|..|=.+ ++++.++|+..|... ++ ..+.+++..|+..+-.. +.+.+++++|++.|..
T Consensus 80 ~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~-g~-~~~~~e~~~l~~~~D~d------~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINL-GE-KVTDEEIDEMIREADFD------GDGMINYEEFVWMISQ 147 (148)
T ss_dssp TTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHH-TC-CCCHHHHHHHHHHHCCS------CCSSEEHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHc-Cc-cccHHHHHHHHHHhCCC------CCCeEeHHHHHHHHhc
Confidence 3456799999999643 899999999999865 44 47899999999886521 3467999999998864
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=82.34 E-value=1.2 Score=34.92 Aligned_cols=68 Identities=12% Similarity=0.312 Sum_probs=51.3
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccC
Q 007399 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (605)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (605)
-....++. +|..|-.+ +.|+.++|+..|...... ..+.+++..++..+... +.+.+++++|..++...
T Consensus 5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEE-PLTDAEVEEAMKEADED------GNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp --CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTC-CCCHHHHHHHHHHHCSS------GGGSEEHHHHHHHHHCC
T ss_pred ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCC-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHhh
Confidence 34567899 99999754 889999999999865312 46888899998887521 23679999999998863
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=82.28 E-value=1.6 Score=38.37 Aligned_cols=63 Identities=21% Similarity=0.389 Sum_probs=46.0
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..++..+|..|-.+ +.|+.++|+.+|.... . ..+.+++..++..+... +.+.+++++|..+|.
T Consensus 95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~d~~------~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-E-TLTDEELRAMIEEFDLD------GDGEINENEFIAICT 159 (161)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT-C-CCCHHHHHHHHHTTCSS------SSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHh
Confidence 56778888888543 7889999998888543 3 46788888887766421 346789999998875
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=82.19 E-value=2.3 Score=37.90 Aligned_cols=62 Identities=19% Similarity=0.159 Sum_probs=49.3
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
+.++..+|..+-.+ +.|+.++|+.+|... + .+.+.+..++..+... +.+.+++++|..+|.+
T Consensus 93 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-g---~~~~~~~~~~~~~D~d------~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGML-G---LDKTMAPASFDAIDTN------NDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH-T---CCGGGHHHHHHHHCTT------CSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHc-C---CCHHHHHHHHHHhCCC------CCceEeHHHHHHHHHH
Confidence 36788999999643 899999999999987 3 5677888888887521 3467999999988865
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=82.16 E-value=1 Score=42.19 Aligned_cols=67 Identities=10% Similarity=0.218 Sum_probs=49.0
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....+..+|+.|-.+ +.++.++|+.+|.........+.+.+..|+..+... ..+.+++++|..+|.+
T Consensus 127 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d------~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 127 KKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLN------GDGEIDFHEFMLMMSK 195 (197)
T ss_dssp SHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTT------CSSSEEHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCC------CCCcCcHHHHHHHHHc
Confidence 456888999998643 889999999999865322235677888888877521 3467999999999875
|
| >3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A* | Back alignment and structure |
|---|
Probab=81.90 E-value=1.8 Score=44.16 Aligned_cols=60 Identities=15% Similarity=0.126 Sum_probs=44.4
Q ss_pred cccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc-------ccchHHHHHHHHhhh
Q 007399 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT-------APVELIKCLRSIKEY 190 (605)
Q Consensus 127 YL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt-------s~i~f~dvi~aI~~~ 190 (605)
|.+|+- .-+++++..|+..|+.-||+|+.=-.|+ .|+++|-++.+ ....|.+-++.|++.
T Consensus 30 ~~i~H~---vNTl~~~~~a~~~GAn~IE~DV~~~~dg-~~v~~hhg~pcdc~r~C~~~~~~~~~l~~lr~~ 96 (302)
T 3rlg_A 30 WIMGAM---VNAIGQIDEFVNLGANSIETDVSFDDNA-NPEYTYHGIPCDCGRNCKKYENFNDFLKGLRSA 96 (302)
T ss_dssp EEEESC---CCSHHHHHHHHHTTCSEEEEEECBCTTS-CBCBCCCCSSCCTTCCSCCCCBHHHHHHHHHHH
T ss_pred EEEeeh---hhhHHHHHHHHHcCCCEEEEEEEECCCC-CEEEEECCCCcchhccCCCCccHHHHHHHHHHh
Confidence 344553 5679999999999999999999754443 56666555443 357889999999884
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.46 E-value=0.52 Score=35.86 Aligned_cols=65 Identities=23% Similarity=0.379 Sum_probs=49.3
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
+..++..+|..|-.+ +.++.++|+.+|.... . ..+.+.+..++..+... +.+.+++++|..++.+
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~-~-~~~~~~~~~~~~~~d~~------~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLG-Q-PLPQEELDAMIREADVD------QDGRVNYEEFARMLAQ 70 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTT-C-SSCHHHHHHHHHHCCSS------SSSEEETTHHHHHHTC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHhh
Confidence 456889999988643 8899999999998643 2 46888888888876421 2356999999998753
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=81.44 E-value=3.3 Score=34.67 Aligned_cols=66 Identities=15% Similarity=0.285 Sum_probs=48.7
Q ss_pred chHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..+|..+|..|. .+ . .|+.++|+.+|+..-+. ...+.+.+..+|..+-. ...+.+++++|...|..
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~------d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDS------NKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCC------CCCCcCcHHHHHHHHHH
Confidence 357889999996 33 3 89999999999864221 13578889999887642 13467999999988764
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=81.20 E-value=1 Score=38.92 Aligned_cols=67 Identities=13% Similarity=0.325 Sum_probs=50.9
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCC
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~ 97 (605)
...++..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+.. .+.+.+++++|..+|.+..
T Consensus 74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~-g~-~~~~~~~~~~~~~~d~------~~dg~i~~~eF~~~~~~~~ 142 (145)
T 2bl0_B 74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNL-GD-ALTSSEVEELMKEVSV------SGDGAINYESFVDMLVTGY 142 (145)
T ss_dssp GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHS-SS-CCCHHHHHHHHTTCCC------CTTSEEEHHHHHHHHHHSS
T ss_pred cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc-CC-CCCHHHHHHHHHHcCC------CCCCcEeHHHHHHHHHhcC
Confidence 456788899998643 889999999999865 44 4788888888876541 1235799999999998743
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 | Back alignment and structure |
|---|
Probab=81.16 E-value=0.89 Score=35.21 Aligned_cols=67 Identities=13% Similarity=0.262 Sum_probs=47.7
Q ss_pred CchHHHHHHHHhhC-C--C-CcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQYSE-N--G-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~~~-~--~-~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
...++..+|..|-. + + .++.++|+.+|+..-+....+.+.+..++..+.. .+.+.+++++|..++..
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~------~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDK------NGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCC------CSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcC------CCCCCCcHHHHHHHHHH
Confidence 45689999999975 4 6 8999999999986444321145566777776531 13467999999988753
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=80.95 E-value=4.3 Score=37.54 Aligned_cols=68 Identities=16% Similarity=0.157 Sum_probs=50.7
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc---------------CCCCCCHHHHHHHHHHHhhhhchhhhccCCC
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ---------------KEDKASKEDAQAIIDSLRELKHLNIFQRRGL 84 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q---------------~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l 84 (605)
.+..++..+|..|-.+ +.|+.++|..+|.... ++...+.+.+..++..+... +.+.+
T Consensus 92 ~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d------~dG~I 165 (204)
T 1jba_A 92 TLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDEN------GDGQL 165 (204)
T ss_dssp CCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCS------CCSCB
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCC------CCCeE
Confidence 3556899999999643 8899999999998762 12224556788888877521 34679
Q ss_pred CHHHHHHHHcc
Q 007399 85 NLEAFFKYLFG 95 (605)
Q Consensus 85 ~~~gF~~~L~s 95 (605)
++++|..+|.+
T Consensus 166 s~~Ef~~~~~~ 176 (204)
T 1jba_A 166 SLNEFVEGARR 176 (204)
T ss_dssp CHHHHHHHHTT
T ss_pred cHHHHHHHHHc
Confidence 99999999986
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=80.81 E-value=1.4 Score=37.96 Aligned_cols=63 Identities=11% Similarity=0.348 Sum_probs=41.8
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
....+..+|..|-.+ +.++.++|+.+|... +. .++.+.+..++..+. . +.+.+++++|..+|.
T Consensus 77 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d-~------~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 77 SEDILRQAFRTFDPEGTGYIPKAALQDALLNL-GD-RLKPHEFAEFLGITE-T------EKGQIRYDNFINTMF 141 (142)
T ss_dssp CHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHHC-C------SSSEECSHHHHTTTC
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-CC-CCCHHHHHHHHHHhC-C------CCCcEeHHHHHHHHc
Confidence 455677777777533 678888888888753 33 367777777777664 2 235678888877664
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=80.65 E-value=1.5 Score=35.93 Aligned_cols=65 Identities=12% Similarity=0.264 Sum_probs=47.7
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|..+|..|. .+ + .++.++|+..|+..-+....+.+.+..++..+-.. +.+.+++++|..++..
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d------~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKN------SDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTT------CSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHH
Confidence 47888999998 44 6 89999999999864221014666788888876421 3467999999998865
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=80.32 E-value=5.2 Score=36.93 Aligned_cols=67 Identities=12% Similarity=0.259 Sum_probs=48.7
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHH---HHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKE---DAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~---~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
....++..+|..|-.+ +.++.++|+.+|........++.+ .+.+++..+.. .+.+.+++++|..+|.
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~------d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 119 LSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDK------NNDGKIDFHEFSEMMK 190 (191)
T ss_dssp CCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCS------SSSSSBCHHHHHHHHC
T ss_pred ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcC------CCCCeECHHHHHHHHc
Confidence 4557889999999643 899999999999875433345653 46677776542 1346799999999874
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=80.28 E-value=2.8 Score=45.04 Aligned_cols=66 Identities=15% Similarity=0.365 Sum_probs=50.8
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....+|..+|+.|=.+ ..|+.++|+++|... ++ .++.+++.+||..+... ....+++++|+++|.|
T Consensus 372 d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~l-Ge-~LSdeEIdeLfke~D~D------gDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-GE-KLTDEEVDEMIREADID------GDGQVNYEEFVQMMTA 439 (440)
T ss_dssp --CHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-TC-CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHC-
T ss_pred ChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHhCC
Confidence 4567899999998533 889999999999865 44 47899999999887521 3467999999999976
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=80.19 E-value=2.1 Score=37.56 Aligned_cols=66 Identities=24% Similarity=0.463 Sum_probs=52.5
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..+..+..+|..|-.+ +.|+.++|+.+|... +. ..+.+++..++..+... +.+.+++++|..+|.+
T Consensus 88 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~D~d------~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 88 QMQQELREAFRLYDKEGNGYISTDVMREILAEL-DE-TLSSEDLDAMIDEIDAD------GSGTVDFEEFMGVMTG 155 (158)
T ss_dssp TTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHH-CT-TCCHHHHHHHHHHHCSS------CCSEECSHHHHHHTSS
T ss_pred hHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-CC-cCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHhc
Confidence 3456799999999644 889999999999875 44 47888999999887521 2467999999999876
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=80.18 E-value=2.2 Score=38.43 Aligned_cols=66 Identities=15% Similarity=0.331 Sum_probs=46.1
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCCC
Q 007399 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDIN 98 (605)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n 98 (605)
.++..+|..|-.+ +.|+.++|+.+|.... . ..+.+++..++..+... +.+.+++++|..+|.+..+
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g-~-~~~~~~~~~~~~~~D~~------~dg~i~~~eF~~~~~~~~~ 151 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLG-E-KLTDEEVDEMIREADID------GDGQVNYEEFVQMMTAKGG 151 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC----CCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHSCC---
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHcCCC------CCCcCcHHHHHHHHHHcCC
Confidence 4577788887533 7788888888887643 3 46788888888876421 3467999999999987543
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=80.16 E-value=1.1 Score=38.93 Aligned_cols=67 Identities=12% Similarity=0.314 Sum_probs=52.0
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.....++..+|..|-.+ +.++.++|+.+|... +. ..+.+++..++..+.. .+.+.+++++|..+|.+
T Consensus 79 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~~~~~~~~~~d~------d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 79 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGL-GE-KLTDAEVDELLKGVEV------DSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp CCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-TT-CCCHHHHHHHHTTCCC------CTTSEEEHHHHHHHHHC
T ss_pred cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CC-CCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHhc
Confidence 34567899999999644 889999999999865 44 4788888888876541 13467999999999875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 605 | ||||
| d2zkmx4 | 349 | c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human | 1e-117 | |
| d1qasa3 | 327 | c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (P | 1e-115 | |
| d1qasa2 | 131 | b.7.1.1 (A:626-756) PI-specific phospholipase C is | 2e-27 | |
| d2zkmx2 | 122 | b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human | 3e-24 | |
| d1qasa1 | 94 | a.39.1.7 (A:205-298) Phosphoinositide-specific pho | 3e-17 | |
| d1w15a_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegi | 2e-15 | |
| d1a25a_ | 132 | b.7.1.2 (A:) C2 domain from protein kinase c (beta | 4e-14 | |
| d1uowa_ | 157 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 2e-12 | |
| d2cm5a1 | 137 | b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat ( | 9e-12 | |
| d2plca_ | 274 | c.1.18.2 (A:) Phosphatidylinositol-specific phosph | 1e-11 | |
| d2ptda_ | 296 | c.1.18.2 (A:) Phosphatidylinositol-specific phosph | 2e-10 | |
| d2bwqa1 | 125 | b.7.1.2 (A:729-853) Regulating synaptic membrane e | 8e-10 | |
| d1dqva2 | 145 | b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus | 4e-09 | |
| d1wfja_ | 136 | b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cr | 3e-08 | |
| d1rsya_ | 143 | b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu | 5e-08 | |
| d1dqva1 | 130 | b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus | 5e-08 | |
| d1ugka_ | 138 | b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens | 2e-07 | |
| d1rh8a_ | 142 | b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [Tax | 1e-06 | |
| d2ep6a1 | 126 | b.7.1.1 (A:92-217) Multiple C2 and transmembrane d | 2e-06 | |
| d1gmia_ | 136 | b.7.1.1 (A:) Domain from protein kinase C epsilon | 4e-06 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 7e-05 | |
| d1wfma_ | 138 | b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapie | 9e-04 |
| >d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 349 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 350 bits (898), Expect = e-117
Identities = 99/362 (27%), Positives = 164/362 (45%), Gaps = 26/362 (7%)
Query: 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDV 168
HDMT P++HYFI + HN+YLT Q + S + L G R +ELD W D +
Sbjct: 1 HDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPI 60
Query: 169 L-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEI 226
+ HG TMT + + + +I E AF S YP++++ E+H+ +P QAK+AE G++
Sbjct: 61 ITHGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDM 120
Query: 227 LFTPGSECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEE 281
L T E PSPE L+ +I+I K + K+ +++ +
Sbjct: 121 LLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPA 180
Query: 282 AWGKEVPNLKSLNNSACDKDDFDGGVDNDEED---SDDKSQHNEAPEYRKLIA-IHAGKP 337
W E ++++ G +D +E SD+ + E Y ++ + ++ +P
Sbjct: 181 VWAGEEGTELEEEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQP 240
Query: 338 KGGLKECLKVDPDKVRRL-SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 396
+ ++ + S +E + + + V + +R + RIYPKG R+DSSNY
Sbjct: 241 TKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNY 300
Query: 397 NPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFL 456
P + W+ G QMVA N Q + +F NG GY+ K F+
Sbjct: 301 MPQMFWNAGCQMVALNFQ--------------TMDLPMQQNMAVFEFNGQSGYLLKHEFM 346
Query: 457 LQ 458
+
Sbjct: 347 RR 348
|
| >d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 327 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C isozyme D1 (PLC-D1) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 343 bits (881), Expect = e-115
Identities = 111/361 (30%), Positives = 154/361 (42%), Gaps = 40/361 (11%)
Query: 114 PVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173
P+SHY + + HN+YL +QL S IRAL KG R +ELD W ++ + + HG T
Sbjct: 3 PLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI-IYHGYT 61
Query: 174 MTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT-PGS 232
T+ + LR+I++YAF AS YPV+++LE+H + + Q +A + LG IL P
Sbjct: 62 FTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLD 121
Query: 233 ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS 292
PSPE LK +I++ K L A E E + A E
Sbjct: 122 GVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENGSEATDVSDEVEAAEME---------- 171
Query: 293 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKV 352
D V + + + + PE +I GG
Sbjct: 172 -----------DEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQAFY 220
Query: 353 RRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFN 412
S SE + + GN VR L RIYP G R DSSNY+P+ W+ G Q+VA N
Sbjct: 221 EMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALN 280
Query: 413 MQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL 472
Q G + + G F+ NGGCGYV KP FL N F+ +
Sbjct: 281 FQ--------------TPGPEMDVYLGCFQDNGGCGYVLKPAFLRDP---NTTFNSRALT 323
Query: 473 P 473
Sbjct: 324 Q 324
|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 105 bits (262), Expect = 2e-27
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI-PSW 534
+ L+V + G+ P + + S D V I GV DT ++T + +N P W
Sbjct: 4 ERLRVRIISGQ----QLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRW 59
Query: 535 NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYK 594
+ EFEF ++VP+LAL+R V +YD S K+DF GQ+ +P + LKQG R V L + G+++
Sbjct: 60 DMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHP 119
Query: 595 SVKLLMHFEF 604
S L +
Sbjct: 120 SATLFVKISI 129
|
| >d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 122 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.2 bits (239), Expect = 3e-24
Identities = 33/132 (25%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTL---EDNWIPS 533
TL +TV G F + Y V + G+P D + L ++ P
Sbjct: 2 TLSITVISG----------QFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPV 51
Query: 534 WNEE--FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 591
W EE + +PELA LR+ V E + F G +P++ L G + LH
Sbjct: 52 WKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNM 107
Query: 592 RYKSVKLLMHFE 603
L + E
Sbjct: 108 PLTMPALFIFLE 119
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 74.9 bits (184), Expect = 3e-17
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 27 VKSMFDQYSENG-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLN 85
+ F++ + + T++V+ L FL Q+E++A A ++I+ +R +
Sbjct: 10 IDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYE--PSETAKAQRQMT 67
Query: 86 LEAFFKYLFGDINPPLSPT-PVVHHDM 111
+ F YL S V+ DM
Sbjct: 68 KDGFLMYLLSADGNAFSLAHRRVYQDM 94
|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 71.3 bits (174), Expect = 2e-15
Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 8/112 (7%)
Query: 472 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 531
TL V V D D Y +V + KKT +
Sbjct: 11 QSTTNTLTVVVLKARHL------PKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPN 64
Query: 532 PSWNEEFEFPLSVPELAL--LRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 581
+NE F F + L + V + + +++ G+ L + G
Sbjct: 65 AVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGG 116
|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain from protein kinase c (beta) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 67.0 bits (163), Expect = 4e-14
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHE 556
D D Y ++ + P +KTKT++ + P WNE F F L + L +E+ +
Sbjct: 31 DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 90
Query: 557 YDMSEKDDFGGQTCLPVSELKQGIRAV--PLHDRKGERYKSV 596
+D++ ++DF G +SEL++ L ++ Y +V
Sbjct: 91 WDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEYFNV 132
|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 63.3 bits (153), Expect = 2e-12
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 472 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 531
+P L V + + D D Y ++ + KKT ++
Sbjct: 21 VPTAGKLTVVILEAKNL------KKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLN 74
Query: 532 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 581
P +NE F F + ++ + + V +YD K+D G+ + + +R
Sbjct: 75 PYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELR 126
|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 137 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2b-domain of rabphilin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 60.6 bits (146), Expect = 9e-12
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%)
Query: 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 532
+ L V + DA D + ++ + KT+ + P
Sbjct: 12 TQQGGLIVGIIRCVHL------AAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNP 65
Query: 533 SWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRK 589
+NEEF + + +LA L I V +YD+ + +D+ G L +S + ++ K
Sbjct: 66 EFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNK 125
Query: 590 GER 592
++
Sbjct: 126 DKK 128
|
| >d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Listeria monocytogenes [TaxId: 1639]
Score = 63.3 bits (153), Expect = 1e-11
Identities = 20/152 (13%), Positives = 59/152 (38%), Gaps = 15/152 (9%)
Query: 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-------CSDVPIIRALQKGVRVIELDIWPN 160
T ++ I H++ + + + + L+ G+R I++
Sbjct: 9 ALPDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK-- 66
Query: 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITL-EDHLTPDLQAKVAEMV 219
DN+++ HG L L +I ++ + +++ L ++ + D + +
Sbjct: 67 ---DNLNIYHGPIFL-NASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPL 122
Query: 220 TQTLGEILFT-PGSECLKEFPSPESLKRRIII 250
+ +T P ++ + P+ + ++ +I++
Sbjct: 123 INIYKDYFYTTPRTDTSNKIPTLKDVRGKILL 154
|
| >d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} Length = 296 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Bacillus cereus [TaxId: 1396]
Score = 59.5 bits (143), Expect = 2e-10
Identities = 21/149 (14%), Positives = 49/149 (32%), Gaps = 10/149 (6%)
Query: 108 HHDMTAPVSHYFIYTGHNSY-----LTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162
+ P++ I H+S Q+ + + G R+ ++
Sbjct: 16 PIPDSIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLT-- 73
Query: 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQT 222
DN VLH G + V L + + K++ ++++L+ + + T
Sbjct: 74 DDNTIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDM--KGAEDSFSST 131
Query: 223 LGEILF-TPGSECLKEFPSPESLKRRIII 250
+ F P + + +I++
Sbjct: 132 FEKKYFVDPIFLKTEGNIKLGDARGKIVL 160
|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Regulating synaptic membrane exocytosis protein, rim2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 8e-10
Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 11/109 (10%)
Query: 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 532
L VT+ + + P + Y ++ +D ++TKT++ P
Sbjct: 11 KVGHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEP 64
Query: 533 SWNEEFEFPLSVP---ELALLRIEVHEYDM--SEKDDFGGQTCLPVSEL 576
WN+ F + +L I + + E+ +F G+ + +
Sbjct: 65 KWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETA 113
|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 53.3 bits (127), Expect = 4e-09
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 8/107 (7%)
Query: 472 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 531
LP L VT+ D D Y + + +KT ++
Sbjct: 16 LPTAGLLTVTIIKASNLK------AMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLN 69
Query: 532 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSEL 576
P++NE F ++ + L I V +YD ++ G +
Sbjct: 70 PTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAA 116
|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain protein At1g63220 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 50.5 bits (120), Expect = 3e-08
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 14/129 (10%)
Query: 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 536
TL+V + +G D + D Y ++ K P WNE
Sbjct: 11 TLEVVLVSAKGL------EDADFLNNMDPYVQLTCR----TQDQKSNVAEGMGTTPEWNE 60
Query: 537 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ--GIRAVPLHDRKGERYK 594
F F +S L+ ++ + D+ +DD G+ +P+ + I + K E YK
Sbjct: 61 TFIFTVSEGTTE-LKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYK 119
Query: 595 -SVKLLMHF 602
+ + + F
Sbjct: 120 GEIWVALSF 128
|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 143 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.1 bits (119), Expect = 5e-08
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 532
L V + D D Y +V + +P +TK P
Sbjct: 31 FQNNQLLVGIIQAAELPA------LDMGGTSDPYVKVFL--LPDKKKKFETKVHRKTLNP 82
Query: 533 SWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 579
+NE+F F + EL L + V+++D K D G+ +P++ + G
Sbjct: 83 VFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 131
|
| >d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.0 bits (118), Expect = 5e-08
Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 11/117 (9%)
Query: 472 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 531
L L V + + D Y I +P +TK
Sbjct: 14 LYGSDQLVVRILQALDLPAKDSNGFSDPYVK--------IYLLPDRKKKFQTKVHRKTLN 65
Query: 532 PSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLP-VSELKQGIRAVPL 585
P +NE F+F + + ELA L V+++D + D GQ L + EL + PL
Sbjct: 66 PIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPL 122
|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 2e-07
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 10/110 (9%)
Query: 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 532
+K V + P + + D Y ++ I +P KT+ L P
Sbjct: 19 FERKAFVVNIKEAR----GLPAMDEQSMTS-DPYIKMTI--LPEKKHKVKTRVLRKTLDP 71
Query: 533 SWNEEFEF---PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 579
+++E F F P + + L + +D +DD G+ +P+S ++
Sbjct: 72 AFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELS 121
|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 142 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Piccolo species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.0 bits (108), Expect = 1e-06
Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 9/121 (7%)
Query: 477 TLKVTVYMGEGWYYDFPHTHFDAY---SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPS 533
L + + + + D + +V + + ++TK ++ + P
Sbjct: 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPE 78
Query: 534 WNEEFEF---PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV---PLHD 587
WN+ + + L + V +YD +DF G+ + +S PL +
Sbjct: 79 WNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138
Query: 588 R 588
+
Sbjct: 139 Q 139
|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (106), Expect = 2e-06
Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 13/130 (10%)
Query: 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 536
L+V V D D + + +T T+ N P WN+
Sbjct: 7 ILQVKVLKAAD------LLAADFSGKSDPFCLL-----ELGNDRLQTHTVYKNLNPEWNK 55
Query: 537 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKS 595
F FP+ +L + V + D + DF G+ +P+ ++ G L ++ E+
Sbjct: 56 VFTFPI-KDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFK 114
Query: 596 VKLLMHFEFI 605
+ + + I
Sbjct: 115 GVIYLEMDLI 124
|
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C epsilon species: Rat (Rattus rattus) [TaxId: 10117]
Score = 44.5 bits (104), Expect = 4e-06
Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Query: 477 TLKVTVYMGEGW-YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWN 535
LK+ + + P F IA D+ + +T T + P+W+
Sbjct: 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWH 66
Query: 536 EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 579
+EF V + + V DDF + EL Q
Sbjct: 67 DEFVTD--VCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQN 108
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (97), Expect = 7e-05
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKED--------KASKEDAQAIIDSLRELKHL 76
+ +F Y MT +HL +F+ + Q++ A + Q +ID + +
Sbjct: 80 IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLID---KYEPS 136
Query: 77 NIFQRRG-LNLEAFFKYLFGDINPPLSPTPVVHH 109
I +RG L+ E +L G N L+ ++ H
Sbjct: 137 GINAQRGQLSPEGMVWFLCGPENSVLAQDKLLLH 170
|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin XIII species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (86), Expect = 9e-04
Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 19/129 (14%)
Query: 458 QTGPHNEVFDPKVKL-----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIA 512
+G N+ PK+ K L VT + D Y G
Sbjct: 5 SSGSWNQA--PKLHYCLDYDCQKAELFVTRLEAVT---------SNHDGGCDCYV-QGSV 52
Query: 513 GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE--KDDFGGQTC 570
+V +T + +W E PL+ EL + + + G+
Sbjct: 53 ANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELR 112
Query: 571 LPVSELKQG 579
L +
Sbjct: 113 LGLDGTSVP 121
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 605 | |||
| d1qasa3 | 327 | Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus n | 100.0 | |
| d2zkmx4 | 349 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 100.0 | |
| d2zkmx2 | 122 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.93 | |
| d1qasa2 | 131 | PI-specific phospholipase C isozyme D1 (PLC-D1), C | 99.93 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 99.74 | |
| d2ep6a1 | 126 | Multiple C2 and transmembrane domain-containing pr | 99.69 | |
| d1rlwa_ | 126 | Domain from cytosolic phospholipase A2 {Human (Hom | 99.61 | |
| d1a25a_ | 132 | C2 domain from protein kinase c (beta) {Rat (Rattu | 99.6 | |
| d2nq3a1 | 133 | E3 ubiquitin-protein ligase Itchy {Human (Homo sap | 99.55 | |
| d1w15a_ | 138 | Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: | 99.53 | |
| d2cm5a1 | 137 | C2b-domain of rabphilin {Rat (Rattus norvegicus) [ | 99.52 | |
| d1rsya_ | 143 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.51 | |
| d1wfja_ | 136 | C2 domain protein At1g63220 {Thale cress (Arabidop | 99.5 | |
| d1rh8a_ | 142 | Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.48 | |
| d1dqva1 | 130 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.46 | |
| d1uowa_ | 157 | Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 | 99.45 | |
| d2bwqa1 | 125 | Regulating synaptic membrane exocytosis protein, r | 99.45 | |
| d1wfma_ | 138 | Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9 | 99.45 | |
| d1ugka_ | 138 | Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960 | 99.4 | |
| d1gmia_ | 136 | Domain from protein kinase C epsilon {Rat (Rattus | 99.39 | |
| d2cjta1 | 128 | Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: | 99.33 | |
| d1dqva2 | 145 | Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: | 99.32 | |
| d2ptda_ | 296 | Phosphatidylinositol-specific phospholipase C {Bac | 99.2 | |
| d1bdya_ | 123 | Domain from protein kinase C delta {Rat (Rattus no | 99.15 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.89 | |
| d2plca_ | 274 | Phosphatidylinositol-specific phospholipase C {Lis | 98.87 | |
| d1vd6a1 | 217 | Putative glycerophosphodiester phosphodiesterase T | 96.42 | |
| d1zcca1 | 240 | Glycerophosphodiester phosphodiesterase UgpQ {Agro | 95.97 | |
| d1e7ua2 | 174 | Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) | 95.87 | |
| d1o1za_ | 226 | Hypothetical protein TM1621 {Thermotoga maritima [ | 94.97 | |
| d1ydya1 | 328 | Glycerophosphodiester phosphodiesterase GlpQ {Esch | 94.78 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 93.35 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 92.38 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 92.17 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 92.01 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 91.71 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 91.67 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 91.43 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 90.71 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 90.59 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 90.42 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 90.42 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 90.23 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 90.14 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 89.44 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 89.36 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 89.18 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 88.96 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 88.9 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 88.48 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 88.04 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 87.61 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 87.3 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 87.09 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 86.97 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 86.77 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 86.38 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 85.93 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 85.8 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 85.74 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 85.39 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 85.34 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 85.24 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 84.69 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 84.07 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 83.52 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 83.17 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 82.87 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 82.1 |
| >d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C isozyme D1 (PLC-D1) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.2e-101 Score=806.29 Aligned_cols=322 Identities=34% Similarity=0.534 Sum_probs=260.3
Q ss_pred CCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhh
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYA 191 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~A 191 (605)
+|||+||||+|||||||+|+||.|.||++||++||++||||||||||||++ ++|||+||||+|++|+|+|||+||++||
T Consensus 1 ~~PLs~YfI~SShNtyl~g~Ql~~~ss~~~~~~~l~~G~R~ielD~w~g~d-~ePvV~HG~t~ts~I~F~dvl~~Ik~~A 79 (327)
T d1qasa3 1 DQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAIRDYA 79 (327)
T ss_dssp CSCGGGEEEEEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGG-GCCEESCTTSCCCCEEHHHHHHHHHHHT
T ss_pred CCCcccceeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCccccceeHHHHHHHHHHhc
Confidence 689999999999999999999999999999999999999999999999976 4799999999999999999999999999
Q ss_pred hccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhhhhhhccc
Q 007399 192 FVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKEND 270 (605)
Q Consensus 192 F~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~ 270 (605)
|++|+|||||||||||+.+||.+||++|+++|||+||.++.+ ....+|||++||||||||+|+.....+......
T Consensus 80 F~~S~yPlILsLe~H~~~~qq~~ma~~l~~~fGd~L~~~~~~~~~~~~psp~~Lk~KIlik~K~~~~~~~~~~~~~---- 155 (327)
T d1qasa3 80 FKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENG---- 155 (327)
T ss_dssp TTSCSSCEEEEEEECCCHHHHHHHHHHHHHHTGGGBCCSCCTTCCSSCCCTGGGTTCEEEEECCCCC-------------
T ss_pred CCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhccCCCcccccccCCCHHHHhhhhhhcccccccccccccccC----
Confidence 999999999999999999999999999999999999997644 467899999999999999999764433221000
Q ss_pred ccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccccCCC
Q 007399 271 SQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPD 350 (605)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 350 (605)
..+.+..+ ...... .+ +............+.+.++.+++++|+.|+.++.++++.........
T Consensus 156 -----------~~~~~~~~---~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~eLs~li~~~~~~~~~~~~~~~~~~~~ 218 (327)
T d1qasa3 156 -----------SEATDVSD---EVEAAE--ME-DEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQA 218 (327)
T ss_dssp --------------------------------------------------CCCHHHHTTCSSEEECCCCCCCTTSSCSCC
T ss_pred -----------ccCCCccc---cccccc--cc-cchhhhhhhcccchhhhHhhHHHHhHHHHhcCccCCCccchhhcCCc
Confidence 00000000 000000 00 00000001111122345678999999999888877777665444445
Q ss_pred ceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccccCCCC
Q 007399 351 KVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGH 430 (605)
Q Consensus 351 ~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~ 430 (605)
.++++||+|.++.+++++++.+|+.||+++|+||||+|+|+|||||||+.+|++|||||||||| |.
T Consensus 219 ~~~~~S~sE~~~~~l~~~~~~~l~~~nk~~l~rvyP~g~ridSsNy~P~~~w~~G~Q~valN~Q--------------t~ 284 (327)
T d1qasa3 219 FYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQ--------------TP 284 (327)
T ss_dssp TTEEEEEEHHHHHHHHHHHTHHHHHHHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTT--------------CC
T ss_pred ceeeeecCHHHHHHHHHHhhHHHHHHHHhheEEEecCCCCCCCCCCChHHHHhcCCcEEEEecc--------------CC
Confidence 6789999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCC
Q 007399 431 GRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL 472 (605)
Q Consensus 431 d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~ 472 (605)
|.+||+|.|||++||+|||||||++||+.. ..|||....
T Consensus 285 D~~m~ln~~~F~~NG~~GyVLKP~~Lr~~~---~~f~p~~~~ 323 (327)
T d1qasa3 285 GPEMDVYLGCFQDNGGCGYVLKPAFLRDPN---TTFNSRALT 323 (327)
T ss_dssp SHHHHHHHHHTTSGGGCSEEECCGGGSCTT---CCCCTTSCC
T ss_pred ChhHHHHHHHHHhcCCcceEECCHHHcCCC---CCcCCCCCC
Confidence 999999999999999999999999999863 479987543
|
| >d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Mammalian PLC domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-99 Score=798.89 Aligned_cols=331 Identities=29% Similarity=0.467 Sum_probs=251.1
Q ss_pred cCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHHH
Q 007399 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+||++||+||||+|||||||+|+|+.|.||++||++||++||||||||||||. .+++|||+||+|+|++|+|+|||+||
T Consensus 1 ~DM~~PL~~y~I~SShNtyl~g~q~~~~~s~~~~~~~l~~G~R~~eldi~dG~~~d~~Pvv~hg~t~t~~i~f~~v~~~I 80 (349)
T d2zkmx4 1 HDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDIFFKEAIEAI 80 (349)
T ss_dssp SCCCSCGGGEEECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSCCCEEHHHHHHHH
T ss_pred CCCCCchhhheeeccccccccCCcCCCcccHHHHHHHHHhCCcEEEEEecCCCCCCCCcEEeeCCeecCceEHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999994 34689999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhhh
Q 007399 188 KEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEA 261 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (605)
++|||.+|+||||||||+|| +++||.+||++|+++||++|+.++.+ ....+|||++||||||||+|+.......
T Consensus 81 ~~~aF~~s~~PliL~le~h~~~~~~q~~~a~~l~~~~g~~L~~~~~~~~~~~~~~~~pSP~~Lk~KIlik~K~~~~~~~~ 160 (349)
T d2zkmx4 81 AESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPT 160 (349)
T ss_dssp HHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGGGBCCSCCTTSCSSTTCCCCCTTTTTTCEEEECCCC------
T ss_pred HHhcccCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHhhhccCcccccccCcCCCCCCHHHhcCcEEEEecCCcccccc
Confidence 99999999999999999999 79999999999999999999997643 2467999999999999999987543322
Q ss_pred hhhhhhcccccCCCCCCccccc-CCCCCCccccCCCCCCCCCCCCCCCCCC---------Cccccccccccchhhhccee
Q 007399 262 KEEKEKENDSQRGKGSADEEAW-GKEVPNLKSLNNSACDKDDFDGGVDNDE---------EDSDDKSQHNEAPEYRKLIA 331 (605)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~ 331 (605)
........+.........+..+ +.+...+..... .++... .....+ .+........+.+++++|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~ 236 (349)
T d2zkmx4 161 SSSKDTGGEAEGSSPPSAPAVWAGEEGTELEEEEV---EEEEEE-ESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVN 236 (349)
T ss_dssp ------------------------------------------------CCSHHHHHHHHHTTGGGGGCCCCCHHHHTTCS
T ss_pred ccccccccccccCCCCcccccccCccccccccccc---cccccc-cccccchhhhhhhccccccccccccchHHHHhhHh
Confidence 2111100000000000000000 000000000000 000000 000000 00111223356788999988
Q ss_pred eecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeee
Q 007399 332 IHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAF 411 (605)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVAL 411 (605)
|..+..+.++...... ...+.++||+|.++.++++.++.+|++||+++|+||||+|+|++||||||+.||++|||||||
T Consensus 237 y~~~~~~~~~~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~li~~Nk~~L~RVYP~g~RvdSSNynP~~~W~~GcQ~VAL 315 (349)
T d2zkmx4 237 YIQPTKFVSFEFSAQK-NRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVAL 315 (349)
T ss_dssp SCEECCCCCHHHHHHH-TCTTEEEEEEHHHHHHHHHHSHHHHHHHHHHSEEEEECCTTCTTCCCCCSHHHHHTTCSEECB
T ss_pred hhcCCccccchhhccc-CcceEEEecCHHHHHHHHHHhHHHHHHHhhccEEEECcCCCcCCCCCCCcHHHHhcCccEeEe
Confidence 8777655555544433 234568999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccC
Q 007399 412 NMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQ 458 (605)
Q Consensus 412 N~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~ 458 (605)
||| |.|.+||||+|||++||+|||||||++||+
T Consensus 316 N~Q--------------t~D~~m~ln~g~F~~NG~cGYVLKP~~LR~ 348 (349)
T d2zkmx4 316 NFQ--------------TMDLPMQQNMAVFEFNGQSGYLLKHEFMRR 348 (349)
T ss_dssp CTT--------------CCSHHHHHHHHHTTTGGGCSEEECCGGGTC
T ss_pred ccc--------------CCCHHHHHHHHHHHhcCCcCeEECCHHHCC
Confidence 999 999999999999999999999999999996
|
| >d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.3e-26 Score=207.85 Aligned_cols=114 Identities=31% Similarity=0.489 Sum_probs=97.8
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcce-eecccc--CCCCCCeeccE-EEE-eeecCCccEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM-KKTKTL--EDNWIPSWNEE-FEF-PLSVPELALLR 551 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k-~kTkvv--~nn~NPvWNEt-f~F-~v~~pela~Lr 551 (605)
+|+|+|||||+|+. ...||||+|++.|.|.|..+ .+|+++ .|++||+|||+ |.| .+..+++++|+
T Consensus 2 tl~V~Visaq~L~~----------~~~dPyV~V~l~g~~~D~~~~~~t~~~~~~n~~nP~wne~~~~~~~~~~~~l~~L~ 71 (122)
T d2zkmx2 2 TLSITVISGQFLSE----------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLR 71 (122)
T ss_dssp EEEEEEEEEESCCS----------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEE
T ss_pred EEEEEEEEeeCCCC----------CCCCcEEEEEEECcCCCCCccEEEEEEEeCCeecceEcccEeEEEecCCCcccEEE
Confidence 69999999999963 13699999999999887543 445443 45699999976 444 57789999999
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.|||+| +++||++++||++|++|||||||+|++|+++++|+|||||++
T Consensus 72 f~V~D~d----~~~lG~~~ipl~~l~~GyR~vpL~~~~g~~l~~~~L~v~i~~ 120 (122)
T d2zkmx2 72 VAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEM 120 (122)
T ss_dssp EEEEETT----TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EEEECCC----CCEEEEEEEEcccCcCCceEEEccCCCcCCCCCceEEEEEEE
Confidence 9999976 789999999999999999999999999999999999999986
|
| >d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93 E-value=3.1e-26 Score=207.37 Aligned_cols=125 Identities=36% Similarity=0.571 Sum_probs=111.3
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCC-CCCeeccEEEEeeecCCccEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn-~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
..|+|+|++|++|+. .+.+..+.+||||+|++.|.+.+..++||++++++ +||.|||+|+|.+..++.+.|+|.|
T Consensus 4 ~~l~V~Vi~a~~L~~----~~~~~~~~~DPyV~v~l~g~~~~~~~~~T~~v~~~~~nP~wne~f~f~~~~~~~~~L~~~V 79 (131)
T d1qasa2 4 ERLRVRIISGQQLPK----VNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMV 79 (131)
T ss_dssp EEEEEEEEEEESCCC----CC-----CCCEEEEEEEESSTTTCEEEECCCCSSCSSSCEEEEEEEEEESCGGGCEEEEEE
T ss_pred EEEEEEEEEeeCCCC----CCCCCCCCcCeEEEEEEccCCCCcEEEEEEEEecccCCceEEEEEEEEEEcchhceEEEEE
Confidence 469999999999963 22345567899999999998888889999998776 8999999999999999999999999
Q ss_pred EeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
||+|..+++++||++++||+++++||||+||+|..|+++..++|||||++
T Consensus 80 ~D~d~~~~d~~iG~~~i~l~~l~~g~~~~~L~~~~g~~~~~~~L~v~i~~ 129 (131)
T d1qasa2 80 EDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISI 129 (131)
T ss_dssp EECCTTTCCEEEEEEEEEGGGBCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EEecCCCCCcEEEEEEEEEeccCCCCEEEECCCCCcCCCCCCEEEEEEEE
Confidence 99999888999999999999999999999999999999999999999986
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.74 E-value=1.3e-18 Score=148.20 Aligned_cols=91 Identities=21% Similarity=0.312 Sum_probs=81.3
Q ss_pred cCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCC
Q 007399 19 AASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (605)
Q Consensus 19 ~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~ 97 (605)
..++.|+||..||.+|+++ +.||+++|.+||+++|++..++.+.|.+||++|++... ...++.||++||++||+|+.
T Consensus 2 ~~l~~R~ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~--~~~~~~ls~~gF~~fL~S~~ 79 (94)
T d1qasa1 2 KMLTQRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSET--AKAQRQMTKDGFLMYLLSAD 79 (94)
T ss_dssp TTTSCCHHHHHHHHHHHTTSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHH--HHHTTBCCHHHHHHHHHSST
T ss_pred CCCCccHHHHHHHHHHhCCCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHh--hhhcCCcCHHHHHHHHcCcc
Confidence 4688999999999999988 89999999999999999988999999999999995321 22457899999999999999
Q ss_pred CCCCCC-CCCcccCC
Q 007399 98 NPPLSP-TPVVHHDM 111 (605)
Q Consensus 98 n~~~~~-~~~v~qDM 111 (605)
|++++| +..|||||
T Consensus 80 N~i~~p~~~~V~qDM 94 (94)
T d1qasa1 80 GNAFSLAHRRVYQDM 94 (94)
T ss_dssp TBSBCGGGGSCCSCC
T ss_pred cCCCCccccccCCCC
Confidence 999998 56899999
|
| >d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=4.1e-17 Score=145.40 Aligned_cols=118 Identities=21% Similarity=0.354 Sum_probs=99.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ .+++|++++++.||.|||+|.|.+..+. ..|.|.||
T Consensus 6 G~L~V~v~~A~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~v~~~~-~~L~i~V~ 73 (126)
T d2ep6a1 6 GILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTVF 73 (126)
T ss_dssp EEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEEEEE
T ss_pred EEEEEEEEEeECCCC------CCCCCCcCeEEEEEcCC-----eEEEEEeeCCceeEEEEEEEEEEEeccC-ceeEEEEE
Confidence 579999999999963 24456789999999843 5789999999999999999999987664 67999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|++..+++++||++.+||+.+.+|. ++.+|....++....++|.++++++
T Consensus 74 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~l~~~~~~~~~~G~i~l~~~~i 124 (126)
T d2ep6a1 74 DEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 124 (126)
T ss_dssp EEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EccCCcCcceEEEEEEEHHHCCCCCceEEEccccCCCCceeEEEEEEEEEE
Confidence 9998888899999999999999886 5667777666665567899998874
|
| >d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from cytosolic phospholipase A2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=8.9e-16 Score=136.28 Aligned_cols=118 Identities=24% Similarity=0.334 Sum_probs=91.9
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|+|+|++|++|+. ....+..+.+||||++.+.+. ...++||+++.++.||.|||+|.|.+..+....|+|.||
T Consensus 3 ~~l~V~v~~a~~L~~---~~~~d~~~~~Dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~f~i~~~~~~~L~v~V~ 77 (126)
T d1rlwa_ 3 HKFTVVVLRATKVTK---GAFGDMLDTPDPYVELFISTT--PDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 77 (126)
T ss_dssp EEEEEEEEEEESCCS---CHHHHHHCCCCEEEEEECTTS--TTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred cEEEEEEEEccCCCC---ccccccCCCCCcEEEEEECCc--ccceeEeeecCCCccceeceeeeecccCcccCcEEEEEE
Confidence 469999999999963 111244567899999998542 235678999999999999999999998777788999999
Q ss_pred eccCCCCCCccEEEEEECCccCCccE---EEEccCCCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|+|..+ +++||++.++|+.|..|.+ |++|.... .+.|.+.+++
T Consensus 78 d~d~~~-d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~g~i~~~l~~ 123 (126)
T d1rlwa_ 78 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQVT-----EMVLEMSLEV 123 (126)
T ss_dssp ECCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEETTTE-----EEEEEEEEEC
T ss_pred ECCCCC-CCeEEEEEEEHHHccCCCeEEEEEEccCCC-----eEEEEEEEEE
Confidence 998754 8999999999999988854 57885432 2455555554
|
| >d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain from protein kinase c (beta) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.60 E-value=1.7e-15 Score=135.91 Aligned_cols=106 Identities=26% Similarity=0.444 Sum_probs=89.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 554 (605)
..|+|+|+.|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+..++. ..|.|.|
T Consensus 15 ~~L~V~V~~a~~L~~------~d~~g~~DpYv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 88 (132)
T d1a25a_ 15 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI 88 (132)
T ss_dssp SEEEEEEEEEESCCC------CSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred CEEEEEEEeeeCCCC------CCCCCCcCeEEEEEEccCCCCccccEEeeecCCCCCccceEEEEEeEccccCCEEeEEE
Confidence 569999999999964 234567899999999776555678899999999999999999999876554 5799999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc-c-EEEEccC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG-I-RAVPLHD 587 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G-y-R~IpL~d 587 (605)
||+|..+++++||.+.++|+.+..+ . .|.+|.+
T Consensus 89 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~W~~L~~ 123 (132)
T d1a25a_ 89 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLS 123 (132)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred EecCCCCCCcEeEEEEEeHHHcCCCCCCeEEECCC
Confidence 9999988899999999999998655 3 3779976
|
| >d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: E3 ubiquitin-protein ligase Itchy species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1.3e-14 Score=130.55 Aligned_cols=117 Identities=19% Similarity=0.212 Sum_probs=91.5
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+.+|.|+|++|++++. .+..+.+||||+|.+.+ .+++|++++++.||+|||.|.|.+.. ...|.|.|
T Consensus 5 ~~~L~v~v~~A~~~~~------~~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~~~~--~~~l~~~V 71 (133)
T d2nq3a1 5 KSQLQITVISAKLKEN------KKNWFGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRV 71 (133)
T ss_dssp CEEEEEEEEEEEECCC------C--CCCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEE
T ss_pred ceEEEEEEEEeECCCc------CCCCCCcCeEEEEEECC-----eEEeeEEEEecccEEEcceEEEEEEe--cceeEEEE
Confidence 4679999999998853 23345689999999754 46799999989999999999999853 35799999
Q ss_pred EeccCCCCCCccEEEEEECCccC---Cc-----cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELK---QG-----IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr---~G-----yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
||+|..+++++||++.++|..+. .| ..++.|....+.....+.|.|.++.
T Consensus 72 ~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~~~l~l~~~~~~~~~~G~L~v~l~~ 129 (133)
T d2nq3a1 72 WSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG 129 (133)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred EEccCCCCCceEEEEEEEHHHhhhhcCCceeeEEEEEecCCCCCCceEEEEEEEEEee
Confidence 99999988999999999998762 22 2345566666666666788887764
|
| >d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.53 E-value=3e-15 Score=135.28 Aligned_cols=113 Identities=19% Similarity=0.155 Sum_probs=87.0
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|+.|++|+. .+..+.+||||+|.+........++||++++++.||.|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~v~~a~~L~~------~~~~~~~dpyvkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~i 87 (138)
T d1w15a_ 14 TNTLTVVVLKARHLPK------SDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEF 87 (138)
T ss_dssp TTEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEE
T ss_pred CCEEEEEEEEeECCCC------CCCCCCcCEEEEEEEeCCcccCccccceeECCCCCCeECcEEEEEecHHHhCccEEEE
Confidence 3469999999999963 234567899999999764444456789999999999999999999876654 46999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEE-EEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~-IpL~d~~g~~l 593 (605)
.|||+|..+++++||++.+++.+...|.+| ..|++..++++
T Consensus 88 ~v~d~~~~~~~~~iG~~~i~l~~~~~~~~hW~~ll~~~~k~i 129 (138)
T d1w15a_ 88 LVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQI 129 (138)
T ss_dssp EEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCE
T ss_pred EEEeCCCCCCCCEEEEEEEcchhCCchHHHHHHHHhCCCCee
Confidence 999999888899999999999987766654 35555555543
|
| >d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2b-domain of rabphilin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=7.3e-15 Score=132.03 Aligned_cols=113 Identities=20% Similarity=0.265 Sum_probs=89.8
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|+.|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~v~~a~nL~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~v 87 (137)
T d2cm5a1 14 QGGLIVGIIRCVHLAA------MDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDI 87 (137)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEEECCCC------CCCCCCcCeEEEEEEEcCCccceeecCEeEcCCCCCccceEEEEEeEHHHccccEEEE
Confidence 3569999999999964 234467899999999764444567899999999999999999999876654 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccE-EEEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR-~IpL~d~~g~~l 593 (605)
.|||.+..+++++||++.+++.++..+.. |.+|.+..++++
T Consensus 88 ~v~~~~~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~v 129 (137)
T d2cm5a1 88 SVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKI 129 (137)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCE
T ss_pred EeeeCCCCCCCCEEEEEEeCccccCcchhhhhhHhhCCCCee
Confidence 99999988889999999999998876654 346776666553
|
| >d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=3e-14 Score=129.42 Aligned_cols=105 Identities=23% Similarity=0.281 Sum_probs=86.0
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|+.|++|+. .+..+.+||||+|.+.+ ....+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 33 ~~~L~V~V~~a~~L~~------~~~~g~~dpyV~v~l~~--~~~~~~kT~~~~~t~~P~wne~f~f~i~~~~l~~~~L~i 104 (143)
T d1rsya_ 33 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 104 (143)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEET--TCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred CCEEEEEEEEccCCCC------CCCCCCCCeEEEEEEcC--CCCeeEEEEEeccccCcceeeeeEEEEEeeccCCceEEE
Confidence 3579999999999963 23446789999999865 33456789999999999999999999875543 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---EEEEccC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 587 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d 587 (605)
.|||+|..+++++||++.+||..+..|. .|.+|.+
T Consensus 105 ~V~d~d~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L~s 142 (143)
T d1rsya_ 105 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred EEEEcCCCCCCcEEEEEEEEchhccCCCCCccEEeCCC
Confidence 9999998888999999999999997664 4667754
|
| >d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: C2 domain protein At1g63220 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.50 E-value=2.2e-14 Score=129.06 Aligned_cols=114 Identities=23% Similarity=0.351 Sum_probs=88.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCCccEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+.|+|+|++|++|+. .+..+.+||||++.+.+ .+++|+++.+ +.||+|||+|.|.+..++ ..|+|.|
T Consensus 10 G~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~t~~~~~~~~nP~Wne~f~f~v~~~~-~~L~v~V 77 (136)
T d1wfja_ 10 GTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSEGT-TELKAKI 77 (136)
T ss_dssp EEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEESSC-CEEEEEE
T ss_pred EEEEEEEEEeeCCCC------CCCCCCCCccEEEEEee-----eeEEEEEEecCCCcEEEeeEEEEEEcCcc-ceEEEEE
Confidence 579999999999953 34567789999998743 4667888875 689999999999998654 4599999
Q ss_pred EeccCCCCCCccEEEEEECCccC-Ccc---EEEEccCCCCCcccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELK-QGI---RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr-~Gy---R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
||+|..+++++||++.+||..+. .|. .+.+|. ..++. .+.|.+.+.|
T Consensus 78 ~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~l~-~~~~~--~G~i~l~l~~ 128 (136)
T d1wfja_ 78 FDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEEY--KGEIWVALSF 128 (136)
T ss_dssp CCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTEE--EEEEEEEEEE
T ss_pred EEecCCCCCCEEEEEEEEhHHhcccCCcCcEEEEec-CCCcc--CEEEEEEEEE
Confidence 99998888999999999999873 333 355554 23333 3577777776
|
| >d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Piccolo species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.48 E-value=2.8e-14 Score=128.88 Aligned_cols=109 Identities=18% Similarity=0.266 Sum_probs=86.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC---------cceeeccccCCCCCCeeccEEEEeeec-C
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD---------TVMKKTKTLEDNWIPSWNEEFEFPLSV-P 545 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D---------~~k~kTkvv~nn~NPvWNEtf~F~v~~-p 545 (605)
+.|.|+|+.|++|+. .+..+.+||||+|.+.+.... ..++||++++++.||.|||+|.|.+.. .
T Consensus 18 ~~L~V~V~~A~~L~~------~d~~g~~DpyV~v~l~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 91 (142)
T d1rh8a_ 18 GNLIIHILQARNLVP------RDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME 91 (142)
T ss_dssp TEEEEEEEEEESCCC------CSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred CEEEEEEEEeECCCC------cCCCCCCCcCEEEEEecCcccccccccCCCceeeeccCCcCCCCceeEEEEEEeeeccc
Confidence 469999999999964 244567899999998543222 234689999999999999999998432 2
Q ss_pred C--ccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCCCC
Q 007399 546 E--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG 590 (605)
Q Consensus 546 e--la~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g 590 (605)
+ ...|+|.|||+|..+++++||++.++|..+..+- +|.+|.+.+.
T Consensus 92 ~~~~~~L~i~V~d~d~~~~~~~lG~~~i~L~~l~~~~~~~~W~~L~~~~~ 141 (142)
T d1rh8a_ 92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred ccCCCEEEEEEEEecCCCCCeeeEEEEEEhHHcCCCCCceEEEECcCcCC
Confidence 2 3579999999998888999999999999986553 6889987653
|
| >d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.46 E-value=8.8e-14 Score=124.30 Aligned_cols=105 Identities=21% Similarity=0.223 Sum_probs=82.7
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|+.|++|+. .+..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 17 ~~~L~V~V~~a~~L~~------~~~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~~~~~~L~v 88 (130)
T d1dqva1 17 SDQLVVRILQALDLPA------KDSNGFSDPYVKIYLLP--DRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF 88 (130)
T ss_dssp SCEEEEEEEEEECCCC------CSTTSCCCEEEEEECTT--STTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred CCEEEEEEEeeeCCcc------ccCCCCcceEEEEEEcc--CCCceEeceeEcCCCCeeeeeEEEEEEchHHcCCCeEEE
Confidence 3569999999999964 23446789999999854 33457899999999999999999999876654 46999
Q ss_pred EEEeccCCCCCCccEEEEEECCc-cCC----ccEEEEccC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSE-LKQ----GIRAVPLHD 587 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~s-Lr~----GyR~IpL~d 587 (605)
+|||+|..+++++||++.|++.. +.. .-.|.+|.+
T Consensus 89 ~V~d~~~~~~d~~iG~~~i~~~~~l~~~~~~~~~W~~L~~ 128 (130)
T d1dqva1 89 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILE 128 (130)
T ss_dssp EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBC
T ss_pred EEEEcCCCCCCceEEEEEECchhhhhcCCCCCcEEEeccc
Confidence 99999988889999999998643 322 124778775
|
| >d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptogamin I species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.45 E-value=4.7e-14 Score=130.22 Aligned_cols=98 Identities=19% Similarity=0.264 Sum_probs=80.5
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|+.|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 24 ~~~L~V~V~~a~~L~~------~~~~~~~dpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~F~v~~~~l~~~~l~i 97 (157)
T d1uowa_ 24 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 97 (157)
T ss_dssp TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred CCEEEEEEEEEEEccc------ccCCCCCCeeEEEEEecCCccccceecccccCCCCcccCCeEEEEecHHHcCccEEEE
Confidence 3569999999999963 234467899999998653333345689999999999999999999887765 48999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQ 578 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~ 578 (605)
.|||.|..+++++||++.|++.+...
T Consensus 98 ~v~d~~~~~~~~~iG~~~i~l~~~~~ 123 (157)
T d1uowa_ 98 TVLDYDKIGKNDAIGKVFVGYNSTGA 123 (157)
T ss_dssp EEEECCSSSCCCEEEEEEEETTCCHH
T ss_pred EEcccCCCCCCceeEEEEEecccCCh
Confidence 99999998889999999999987543
|
| >d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Regulating synaptic membrane exocytosis protein, rim2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.9e-13 Score=121.00 Aligned_cols=105 Identities=19% Similarity=0.279 Sum_probs=79.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~Lr 551 (605)
...|.|+|+.|++|+. .+..+.+||||+|.+.+......++||++++++.||.|||+|.|. +...++ ..|.
T Consensus 13 ~~~L~V~V~~a~~L~~------~~~~~~~dpyVkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~f~~~~~~~l~~~~L~ 86 (125)
T d2bwqa1 13 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 86 (125)
T ss_dssp TTEEEEEEEEEESCCC------CTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEE
T ss_pred CCEEEEEEEEeECCCC------cCCCCCCCEEEEEEEeCCCCCccccccCEEcCCCCCEEccEEEEeeeChhhcCCCEEE
Confidence 3569999999999963 234467899999999754455667899999999999999999997 554444 4799
Q ss_pred EEEEeccCC--CCCCccEEEEEECCccCC-cc-EEEEc
Q 007399 552 IEVHEYDMS--EKDDFGGQTCLPVSELKQ-GI-RAVPL 585 (605)
Q Consensus 552 f~V~D~D~~--~~ddflGq~~lpL~sLr~-Gy-R~IpL 585 (605)
|.|||++.. +++++||++.+||+.+.. +- .|.||
T Consensus 87 i~v~d~~~~~~~~~~~iG~~~i~l~~~~~~~~~~Wy~L 124 (125)
T d2bwqa1 87 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL 124 (125)
T ss_dssp EEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred EEEEECCCCCCCCCeeEEEEEEEchhcCCCCCCEEEeC
Confidence 999998864 345699999999998753 22 45666
|
| >d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin XIII species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=3.5e-13 Score=121.59 Aligned_cols=106 Identities=20% Similarity=0.185 Sum_probs=86.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|+.|.+|+. .+.+||||+|.+.+. ....+++|++++++.||+|||+|.|.+...++ ..|+|
T Consensus 25 ~~~L~V~v~~a~~L~~---------~g~~dpyVkv~l~~~-~~~~~~kT~v~~~~~~P~wne~f~f~v~~~~l~~~~L~~ 94 (138)
T d1wfma_ 25 KAELFVTRLEAVTSNH---------DGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTL 94 (138)
T ss_dssp TTEEEEEEEEEECCCC---------SSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEE
T ss_pred CCEEEEEEEEcCCCCC---------CCCcCcEEEEEECCC-CCccceeeeEECCCCCceEeeeEEEEeeehhccceEEEE
Confidence 3569999999998842 234699999998753 23446789999999999999999999876654 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---cEEEEccCCCC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG 590 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g 590 (605)
.|||.|..+++++||++.|+|..+..+ -.|.+|.....
T Consensus 95 ~V~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~W~~L~~~~~ 135 (138)
T d1wfma_ 95 TLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp EEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred EEeeecccccceeeeEEEEEhHHccCCCCceEeEeCCCCCC
Confidence 999999888899999999999998644 35789987543
|
| >d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin IV species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=1.1e-12 Score=118.19 Aligned_cols=95 Identities=22% Similarity=0.389 Sum_probs=77.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCC-CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALL 550 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~-s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~L 550 (605)
...|.|+|+.|++|+. .+.. ..+||||+|.+.+ ....++||++++++.||.|||+|.|. +...++ ..|
T Consensus 21 ~~~L~V~V~~a~~L~~------~d~~~~~~dpyV~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~L 92 (138)
T d1ugka_ 21 RKAFVVNIKEARGLPA------MDEQSMTSDPYIKMTILP--EKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELAL 92 (138)
T ss_dssp GTEEEEEEEEEESCCC------CBTTTTBCEEEEEEEEET--TTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEE
T ss_pred CCEEEEEEEEecCCCC------CCCCCCccceEEEEEEcC--CCCEeEeCeeEeCCCCCceeeEEEEeeeCHHHcccceE
Confidence 3569999999999964 1222 3469999999864 33457789999999999999999996 444443 479
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccC
Q 007399 551 RIEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 551 rf~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
+|.|||.|..+++++||++.+||+.+.
T Consensus 93 ~~~V~d~d~~~~~~~iG~~~i~L~~~~ 119 (138)
T d1ugka_ 93 HFTILSFDRFSRDDIIGEVLIPLSGIE 119 (138)
T ss_dssp EEEEEEECSSCCCCCCEEEEEECTTCC
T ss_pred EEEEEECCCCCCCcEEEEEEEEccccc
Confidence 999999998888999999999999874
|
| >d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C epsilon species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.39 E-value=8.5e-13 Score=118.88 Aligned_cols=117 Identities=16% Similarity=0.174 Sum_probs=87.8
Q ss_pred cceEEEEEEeccccccCC-----CCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccE
Q 007399 475 KKTLKVTVYMGEGWYYDF-----PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL 549 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~-----~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~ 549 (605)
.+.|+|+|+.|++|+... ........+.+||||+|.+.+ ....+|+++.++.||+|||+|.|.+..+ ..
T Consensus 5 ~G~L~v~I~~A~~L~~~~~~~~~~~~~~~~~~~~DPYv~v~l~~----~~~~~T~~~~~t~~P~Wne~f~f~v~~~--~~ 78 (136)
T d1gmia_ 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG--RK 78 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE--CE
T ss_pred EEEEEEEEEEeECCCcccccccccccccCCCCCcCcEEEEEeCC----CcCcEeeEEcCCCCccCccEEEEEEecC--Cc
Confidence 367999999999996310 000112335689999999833 3456899999999999999999998643 57
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCccC-Cc----cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 550 LRIEVHEYDMSEKDDFGGQTCLPVSELK-QG----IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 550 Lrf~V~D~D~~~~ddflGq~~lpL~sLr-~G----yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.|.|||.+..+++++||.+.++|+.+. .+ -+|++|.. .+.+.++++|
T Consensus 79 l~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~w~~L~p-------~G~v~l~v~~ 131 (136)
T d1gmia_ 79 IELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDL 131 (136)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEE
T ss_pred eEEEEEEecCCCCceeEEEEEEEHHHhhhcCCcceeEEEeCCC-------CcEEEEEEEE
Confidence 9999999998888999999999999884 22 25788852 3567777765
|
| >d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Unc-13 homolog A species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.33 E-value=3.9e-12 Score=113.65 Aligned_cols=111 Identities=21% Similarity=0.275 Sum_probs=83.6
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|.|+|..|+++.. . +..||||+|.+.+ .+.+|+++++ .||+|||+|.|.+..++ ..|.|.|||
T Consensus 3 ~L~V~v~~a~~l~~------~---~~~dpYv~l~~~~-----~k~~T~~~k~-~nP~Wne~f~f~v~~~~-~~L~v~V~d 66 (128)
T d2cjta1 3 LLCVGVKKAKFDGA------Q---EKFNTYVTLKVQN-----VKSTTIAVRG-SQPSWEQDFMFEINRLD-LGLTVEVWN 66 (128)
T ss_dssp EEEEEEEEEECSSC------G---GGCEEEEEEEETT-----EEEECCCEES-SSCEEEEEEEEEECCCS-SEEEEEEEE
T ss_pred EEEEEEEEEECCCC------C---CCcCeEEEEEeCC-----EEEEEEEecC-CCCeEEEEEEEeecccc-ceEEEEEEe
Confidence 58999999998842 1 2369999999843 5788888864 59999999999998876 458999999
Q ss_pred ccCCCCCCccEEEEEECCccCC----cc-EEEEccCC----CCCcc-----cCeEEEEEEEE
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQ----GI-RAVPLHDR----KGERY-----KSVKLLMHFEF 604 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~----Gy-R~IpL~d~----~g~~l-----~~atLlv~i~f 604 (605)
++... +++||++.|||+.+.. |. .|++|..+ .|+.. .+.+|+++..|
T Consensus 67 ~~~~~-d~~lG~~~I~L~~l~~~~~~~~~~W~~L~~~~~~~~gei~gt~~~~~~~~ll~~~~ 127 (128)
T d2cjta1 67 KGLIW-DTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 127 (128)
T ss_dssp CCSSC-EEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred CCCcC-CcceEEEEEEehhhccCCCCCCCeeEECCccccCCCCEEEeeecCCCcEEEEEEEc
Confidence 98764 8999999999999853 23 58899543 34432 35688877766
|
| >d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: Synaptotagmin-like (S variant) domain: Synaptotagmin III species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.32 E-value=2.6e-13 Score=123.26 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=88.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|.|+|+.|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 19 ~~~L~V~V~~a~nL~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~v 92 (145)
T d1dqva2 19 AGLLTVTIIKASNLKA------MDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI 92 (145)
T ss_dssp TTEEEEEEEEEESCCC------CSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCC
T ss_pred CCEEEEEEEEEeCCCC------cCCCCCcCceEEEEEccCCccceeecCEEEeCCCCceecceEEEEEehhhcCCCEEEE
Confidence 3569999999999963 234466799999998765555557889999999999999999998865443 56999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC-CccE-EEEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELK-QGIR-AVPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr-~GyR-~IpL~d~~g~~l 593 (605)
.|+|.+..+++++||++.|++..+. .|.. |.+|.+.-++++
T Consensus 93 ~v~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~l~~~p~~~i 135 (145)
T d1dqva2 93 AVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPV 135 (145)
T ss_dssp EEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCS
T ss_pred EEEecCCCCCCcEEEEEEECchHcCchhhHHHHHHHhCCCCee
Confidence 9999998888999999999999874 3444 346665555543
|
| >d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Bacillus cereus [TaxId: 1396]
Probab=99.20 E-value=3e-12 Score=128.93 Aligned_cols=137 Identities=10% Similarity=0.128 Sum_probs=99.7
Q ss_pred CCcccceeeeccCcc--cccCCCC---CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHH
Q 007399 112 TAPVSHYFIYTGHNS--YLTGNQL---NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 112 ~~PLs~YfI~SSHNT--YL~g~Ql---~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
+.||+++.|-.|||+ |-++..+ .+.+-...+...|..|+|+++|||+...+ +++.++||.. ...++|.||++.
T Consensus 20 ~~~l~~l~ipGtHnS~t~~~~~~~~~~~s~~Q~~~i~~QL~~GvR~fDlrv~~~~~-~~~~~~Hg~~-~~~~~l~~vL~~ 97 (296)
T d2ptda_ 20 SIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDD-NTIVLHHGPL-YLYVTLHEFINE 97 (296)
T ss_dssp TSBTTTSCEEEETTGGGTTCCCHHHHHHHCCCSSCHHHHHTTTCCEEEEEEEECTT-SCEEEEETTE-EEEEEHHHHHHH
T ss_pred CceeeheEeccccccccccCCCCcccccccCccchHHHHHHhCCcEEEEeeeecCC-CceEEEeCCc-cCCCcHHHHHHH
Confidence 569999999999997 4444322 12333456789999999999999986544 5788999864 445789999999
Q ss_pred HhhhhhccCCCceEEEeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCcEEEecC
Q 007399 187 IKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTK 253 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc~~--~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K 253 (605)
|+++......-.|||+|+.++.. +....+.+.+.+.+++..... .....|++.+++||+++...
T Consensus 98 i~~Fl~~np~EvVil~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~ptL~e~~~k~~~l~~ 163 (296)
T d2ptda_ 98 AKQFLKDNPSETIIMSLKKEYEDMKGAEDSFSSTFEKKYFVDPIFL---KTEGNIKLGDARGKIVLLKR 163 (296)
T ss_dssp HHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTBC---CCCSSCBHHHHTTSEEEEEE
T ss_pred HHHHHHhCCCceEEEEEEeccCCccchHHHHHHHHHHHhccCcccc---cCCCCCChHHHccceeEEEE
Confidence 99999999999999999988743 222234444444444432221 23578999999999877643
|
| >d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: C2 domain-like superfamily: C2 domain (Calcium/lipid-binding domain, CaLB) family: PLC-like (P variant) domain: Domain from protein kinase C delta species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.15 E-value=9.4e-11 Score=103.67 Aligned_cols=93 Identities=15% Similarity=0.178 Sum_probs=73.3
Q ss_pred CCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC--
Q 007399 500 YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK-- 577 (605)
Q Consensus 500 ~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr-- 577 (605)
.+..||||+|.+.+......+++|++++++.||+|||+|+|.+.. ...|.|.|||+| ++++|.+.+++..|.
T Consensus 21 ~~~~dPY~~v~l~~~~~~~~~~~t~~~kkT~nP~WnE~F~~~v~~--~~~l~i~V~d~d----d~~~g~~~i~l~~l~~~ 94 (123)
T d1bdya_ 21 DDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA----EDPMSEVTVGVSVLAER 94 (123)
T ss_dssp CCSCCCEEEEEEEEECCGGGTTBEEECSCCBCCCTTCEEEEECCT--TCEEEEEEEEET----TEEEEEEEEEHHHHHHH
T ss_pred CCCCCCEEEEEEcCccccccceEEEEeCCCCCcccceEEEEEEcc--ccEEEEEEEEcc----ccccCccEEehhheeec
Confidence 466899999999765444455678999999999999999999864 357999999976 789999999998873
Q ss_pred ---Ccc---EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 578 ---QGI---RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 578 ---~Gy---R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
.|- -|++|. +.+.|.+.++|+
T Consensus 95 ~~~~~~~~~~W~~L~-------~~Gkl~l~v~~f 121 (123)
T d1bdya_ 95 CKKNNGKAEFWLDLQ-------PQAKVLMCVQYF 121 (123)
T ss_dssp HHTTTTEEEEEEECB-------SSCEEEEEEEEE
T ss_pred cccCCCcccEEEeCC-------CCEEEEEEEEEe
Confidence 333 467774 246788888875
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=2.1e-10 Score=106.70 Aligned_cols=82 Identities=24% Similarity=0.368 Sum_probs=56.8
Q ss_pred CCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhhhhchhhhccCCCCHHHH
Q 007399 20 ASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAF 89 (605)
Q Consensus 20 ~~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF 89 (605)
.++.|+||..+|..|..+ +.||.++|++||.++|++.. ++.+.|.++|.+|++... ...++.||++||
T Consensus 73 ~l~~r~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~ls~d~F 150 (170)
T d2zkmx1 73 SLCPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGI--NAQRGQLSPEGM 150 (170)
T ss_dssp HHSCCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC----------CCHHHH
T ss_pred ccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccc--cccCCeECHHHH
Confidence 456899999999999855 78999999999999999853 467889999999985321 224468999999
Q ss_pred HHHHccCCCCCCCC
Q 007399 90 FKYLFGDINPPLSP 103 (605)
Q Consensus 90 ~~~L~s~~n~~~~~ 103 (605)
++||+|++|+++.|
T Consensus 151 ~~fL~S~en~i~~~ 164 (170)
T d2zkmx1 151 VWFLCGPENSVLAQ 164 (170)
T ss_dssp HHHHHSTTSCSBCG
T ss_pred HHHHcCccCCCCCh
Confidence 99999999999987
|
| >d2plca_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Bacterial PLC domain: Phosphatidylinositol-specific phospholipase C species: Listeria monocytogenes [TaxId: 1639]
Probab=98.87 E-value=1.5e-09 Score=107.94 Aligned_cols=135 Identities=14% Similarity=0.287 Sum_probs=105.5
Q ss_pred CCcccceeeeccCcccccCCCCCC-------CCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHH
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQLNS-------DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCL 184 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g-------~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi 184 (605)
+.||+|..|--|||++-......+ ..-...+..-|..|+|.++|++++ +..++||.... ..+|.+|+
T Consensus 13 ~~~l~~l~ipGtHnS~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GvR~~dlr~~~-----~~~~~Hg~~~~-~~~~~~~L 86 (274)
T d2plca_ 13 TTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKD-----NLNIYHGPIFL-NASLSGVL 86 (274)
T ss_dssp TCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEECT-----TSEEEETTEEE-EEEHHHHH
T ss_pred CcEeeheecccccccccccCCCCCcccccccccccccHHHHHHhCCeEEEeeeCC-----ceEEEEEeecc-ceeHHHHH
Confidence 569999999999999632211111 011123577899999999999974 47899997664 47899999
Q ss_pred HHHhhhhhccCCCceEEEecc-CCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEec
Q 007399 185 RSIKEYAFVASEYPVVITLED-HLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIIST 252 (605)
Q Consensus 185 ~aI~~~AF~~S~yPvIlSlE~-Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~ 252 (605)
+.|+++--....-.|||.++. +.+.+....+++.+.+.||+.++.++. .....+|+..+++|||+|-.
T Consensus 87 ~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ptl~e~~gk~vi~~ 156 (274)
T d2plca_ 87 ETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLS 156 (274)
T ss_dssp HHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSCCCCCCCBTTTTTTCEEEEE
T ss_pred HHHHHHHHhCCCceEEEEEEecCCCchHHHHHHHHHHHHhhcccccCccccccCCCCChHHhCCCEEEEe
Confidence 999998877778899999965 777777888889999999999998653 33467999999999998864
|
| >d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Putative glycerophosphodiester phosphodiesterase TTHB141 species: Thermus thermophilus [TaxId: 274]
Probab=96.42 E-value=0.0031 Score=57.96 Aligned_cols=42 Identities=24% Similarity=0.378 Sum_probs=36.2
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
..-+-|.+||.+|+..||++||+|||=-.| +.|||+|..|+.
T Consensus 12 ~~pENT~~a~~~a~~~G~~~iE~DV~~TkD-g~~vv~HD~~~~ 53 (217)
T d1vd6a1 12 KAKENTLESFRLALEAGLDGVELDVWPTRD-GVFAVRHDPDTP 53 (217)
T ss_dssp TSCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSCSEET
T ss_pred CCCchhHHHHHHHHHcCCCEEEEEEEEecC-CCEEEecccccC
Confidence 345899999999999999999999997555 479999998766
|
| >d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Glycerophosphodiester phosphodiesterase UgpQ species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.97 E-value=0.0026 Score=60.18 Aligned_cols=39 Identities=28% Similarity=0.354 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
-+.|.++|..|+..||++||+|+|=-.| +.|||+|..++
T Consensus 15 pENT~~a~~~A~~~G~~~iE~Dv~~TkD-g~~Vv~HD~~l 53 (240)
T d1zcca1 15 PENTFAAADLALQQGADYIELDVRESAD-GVLYVIHDETL 53 (240)
T ss_dssp CSSSHHHHHHHHHTTCSEEEEEEEECTT-CCEEECSSSBT
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEEecC-CCEEEeccccc
Confidence 4789999999999999999999997555 47999999876
|
| >d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Hypothetical protein TM1621 species: Thermotoga maritima [TaxId: 2336]
Probab=94.97 E-value=0.011 Score=54.91 Aligned_cols=41 Identities=20% Similarity=0.282 Sum_probs=35.8
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
..-+.|.++|..|+..||+.||+|++--.| +.|||+|-.|+
T Consensus 16 ~~pENT~~af~~a~~~g~~~iE~Dv~~T~D-g~~Vv~HD~~l 56 (226)
T d1o1za_ 16 KYLENTLEAFMKAIEAGANGVELDVRLSKD-GKVVVSHDEDL 56 (226)
T ss_dssp TSCTTSHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSEE
T ss_pred CCCcchHHHHHHHHHcCCCEEEEEEEEccC-CCEEeecccee
Confidence 345889999999999999999999997655 47999999886
|
| >d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: PLC-like phosphodiesterases family: Glycerophosphoryl diester phosphodiesterase domain: Glycerophosphodiester phosphodiesterase GlpQ species: Escherichia coli [TaxId: 562]
Probab=94.78 E-value=0.011 Score=57.54 Aligned_cols=40 Identities=23% Similarity=0.260 Sum_probs=35.5
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+.|.++|..|+..||-+||+|||=-.| +.|||+|-.+|.
T Consensus 16 PENTl~af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 55 (328)
T d1ydya1 16 PEHTLPAKAMAYAQGADYLEQDLVMTKD-DNLVVLHDHYLD 55 (328)
T ss_dssp STTCHHHHHHHHHTTCSEEEEEEEECTT-SCEEECSSSBCT
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeEccC-CcEEEECCchhh
Confidence 4889999999999999999999996555 479999999884
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.35 E-value=0.025 Score=44.23 Aligned_cols=67 Identities=13% Similarity=0.274 Sum_probs=47.9
Q ss_pred CCchHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 22 EAPDAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 22 ~~r~ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
....+|..+|++|+. + .+|+.++|+..|+..-.....+.+.+..||...- ..+.+.+++++|..+|.
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D------~d~dG~Idf~EF~~l~~ 74 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELD------KNGDGEVSFEEFQVLVK 74 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTC------CCSSSSEEHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHc------CCCCCcCcHHHHHHHHH
Confidence 346799999999973 3 6899999999999863322233444666766543 22446799999998875
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=92.38 E-value=0.11 Score=39.85 Aligned_cols=66 Identities=17% Similarity=0.391 Sum_probs=53.0
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.++.+|..+|..|=.+ +.|+.++|+..|+.... ..+.+++.+++..+-. -+.+.|++++|.++|..
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~~~~e~~~~~~~~D~------d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE--NLTEEELQEMIAEADR------NDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTC--CCCHHHHHHHHHHHCC------SSSSEECHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCC--CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHHc
Confidence 3567899999999644 89999999999998654 4788899999987642 13467999999999864
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=92.17 E-value=0.14 Score=39.92 Aligned_cols=66 Identities=14% Similarity=0.423 Sum_probs=52.9
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+..+|..+|..|=.+ ++++.++|+..|+.. +. ..+.+++..||..+-.. ..+.+++++|..+|..
T Consensus 12 ~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~~~~ev~~~~~~~D~d------~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GE-TITEDDIEELMKDGDKN------NDGRIDYDEFLEFMKG 79 (81)
T ss_dssp CCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTS-SS-CCCHHHHHHHHHHHCSS------SSSSEEHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhc-CC-CCCHHHHHHHHHHHCCC------CCCcEeHHHHHHHHHh
Confidence 4567899999999643 899999999999863 44 47899999999987522 3467999999999864
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=92.01 E-value=0.2 Score=42.37 Aligned_cols=64 Identities=14% Similarity=0.335 Sum_probs=51.0
Q ss_pred chHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|+.|-. + +.++.++|+.+|.... . ..+.+++.+|+..+... +.+.+++++|.++|+|
T Consensus 81 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~-~-~~~~~~~~~i~~~~D~d------~dG~i~~~eF~~~l~s 146 (146)
T d1exra_ 81 EEELIEAFKVFDRDGNGLISAAELRHVMTNLG-E-KLTDDEVDEMIREADID------GDGHINYEEFVRMMVS 146 (146)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT-C-CCCHHHHHHHHHHHCSS------SSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh-h-cCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHhcC
Confidence 3478889999853 3 8999999999998643 3 47899999999987522 3467999999999987
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=91.71 E-value=0.16 Score=41.16 Aligned_cols=64 Identities=11% Similarity=0.236 Sum_probs=47.3
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|++|+. + ++|+.++|+..|+.+=.....+.+.+.+||...- ..+.+.+++++|..+|..
T Consensus 15 ~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D------~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 15 TVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLD------VNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHC------TTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhc------CCCCCcCCHHHHHHHHHH
Confidence 67789999973 2 6999999999999763332234556778887754 224578999999999865
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.67 E-value=0.099 Score=40.14 Aligned_cols=67 Identities=10% Similarity=0.290 Sum_probs=48.1
Q ss_pred CCchHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 22 EAPDAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 22 ~~r~ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
.++.||..+|+.|.. + +.++.++|+..|+..-.....+..++.+++..+-. -..+.+++++|+.+|.
T Consensus 2 ~s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~------d~dG~I~f~EF~~~m~ 72 (76)
T d1qx2a_ 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDK------NGDGEVSFEEFLVMMK 72 (76)
T ss_dssp CCHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCT------TCSSEECHHHHHHHHH
T ss_pred cCHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhc------CCCCcCcHHHHHHHHH
Confidence 467899999999963 3 68999999999987522211223357778777542 1346799999999874
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=91.43 E-value=0.18 Score=40.43 Aligned_cols=63 Identities=14% Similarity=0.289 Sum_probs=48.3
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIEV----QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~---~-~~~~~~~~~~Fl~~~----Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|.+|+. + .+|+.++|++.|+.. -+. ..+.+.+.+|+..+-.. +.+.+++++|..+|.+
T Consensus 10 ~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~-~~~~~~~~~i~~~~D~n------~DG~I~F~EF~~lm~~ 80 (93)
T d3c1va1 10 VMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGK-RTDEAAFQKLMSNLDSN------RDNEVDFQEYCVFLSC 80 (93)
T ss_dssp HHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTT-CCSHHHHHHHHHHHCTT------CSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhcccc-CCCHHHHHHHHHHHcCC------CCCCCCHHHHHHHHHH
Confidence 57899999984 2 469999999999863 222 36788899998886522 3467999999998765
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=90.71 E-value=0.2 Score=41.12 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=53.1
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcC-CCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQK-EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
....+|+.+|+.|=.+ ++|+.++|+.+|+.-.. ....+.+.+..||+.+-.. +.+.+++++|..+|.+
T Consensus 37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l~~~~D~d------~dG~I~~~EF~~~m~a 107 (107)
T d2pvba_ 37 KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKD------GDGMIGVDEFAAMIKA 107 (107)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHcC
Confidence 4667899999999644 89999999999986422 1247889999999887522 3468999999998863
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=90.59 E-value=0.44 Score=38.09 Aligned_cols=64 Identities=14% Similarity=0.265 Sum_probs=46.2
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|.+||+. .+|+..+|+.+|+.+=.. ...+.+.+..|+...- ..+.+.++|++|..++..
T Consensus 10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD------~n~Dg~vdF~EF~~li~~ 80 (90)
T d3cr5x1 10 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLD------SDGDGECDFQEFMAFVAM 80 (90)
T ss_dssp HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHC------TTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc------CCCCCcCCHHHHHHHHHH
Confidence 577899999843 679999999999875211 1234666777877654 224578999999988764
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=90.42 E-value=0.27 Score=39.08 Aligned_cols=64 Identities=19% Similarity=0.306 Sum_probs=46.2
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|++|+.. .+|+.++|+..|+++=.. ...+.+.+.+++...- ..+.+.++|++|..++..
T Consensus 9 ~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD------~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 9 GIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLD------ANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHC------TTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHc------CCCCCcCCHHHHHHHHHH
Confidence 578899999842 469999999999874211 1235677788877643 224578999999988753
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=90.42 E-value=0.12 Score=38.89 Aligned_cols=63 Identities=13% Similarity=0.317 Sum_probs=50.5
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
.||..+|..|-.+ +.++.++|+..|+.- +...++.+.+..+|..+-.. ..+.+++++|..+|.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~s~~e~~~~~~~~D~d------~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKV-GEEPLTDAEVEEAMKEADED------GNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTT-TTCCCCHHHHHHHHHHHCSS------GGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHh-CCCCCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHH
Confidence 4789999999754 899999999999865 33357899999999886522 346899999999875
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=90.23 E-value=0.27 Score=37.50 Aligned_cols=66 Identities=15% Similarity=0.381 Sum_probs=52.8
Q ss_pred CCchHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+..+|..+|+.|=. + ++++.++|+..|+.. +. ..+.+++.++|..+-.. +.+.++++.|.++|.+
T Consensus 6 ~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~l-g~-~~~~~e~~~~~~~~D~d------~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 6 KSEEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVIEEDIEDLMKDSDKN------NDGRIDFDEFLKMMEG 73 (75)
T ss_dssp CCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHS-SS-CCCHHHHHHHHHHHCSS------SCSEECHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhc-CC-CccHHHHHHHHHHhCCC------CCCcEeHHHHHHHHHh
Confidence 355789999999953 3 999999999999874 34 57999999999887521 3467999999999864
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=90.14 E-value=0.37 Score=37.98 Aligned_cols=63 Identities=16% Similarity=0.288 Sum_probs=44.3
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCC----CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKED----KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~----~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
-|..+|.+||+. .+|+..+|+.+|+++=..- ..+...+..|+...- ..+.+.++|.+|..++.
T Consensus 11 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD------~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 11 TIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLD------TNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHC------TTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhc------CCCCCcCcHHHHHHHHh
Confidence 477899999943 6899999999999852221 123444566766643 22446799999998875
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.44 E-value=0.13 Score=42.37 Aligned_cols=68 Identities=16% Similarity=0.324 Sum_probs=53.6
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ-KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q-~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+..+++.+|+.|=.+ ++++.++|+.+|+.-. ....++.+.+..|++.+-.. +.+.+++++|...|.|
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d------~dG~I~~~EF~~~m~s 108 (108)
T d1rroa_ 38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADND------GDGKIGADEFQEMVHS 108 (108)
T ss_dssp SCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCS------SSSSEEHHHHHHHHTC
T ss_pred CCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHcC
Confidence 4667899999999744 8999999999998642 22347889999999987521 3468999999999875
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=89.36 E-value=0.44 Score=38.19 Aligned_cols=64 Identities=13% Similarity=0.188 Sum_probs=47.3
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|++|+.. .+|+.++|++.|+.+=.. ...+.+.+.+|+...-. .+.+.+++++|..+|..
T Consensus 10 ~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~------n~Dg~IdF~EF~~l~~~ 80 (93)
T d1ksoa_ 10 AIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT------NKDCEVDFVEYVRSLAC 80 (93)
T ss_dssp HHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHH------TTTCEECHHHHHHHHHH
T ss_pred HHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcC------CCCCCCcHHHHHHHHHH
Confidence 578899999832 379999999999975221 12357778888887652 23467999999988765
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=89.18 E-value=0.22 Score=39.90 Aligned_cols=65 Identities=14% Similarity=0.332 Sum_probs=47.6
Q ss_pred hHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..|..+|++|..+ +.|+.++|.+-|...... ...+.+.+.+|+..+- ..+.+.+++++|..++.+
T Consensus 9 e~l~~~F~~yd~ddG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D------~n~DG~I~F~EF~~li~~ 77 (92)
T d1a4pa_ 9 ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLD------QCRDGKVGFQSFFSLIAG 77 (92)
T ss_dssp HHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHC------TTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHh------CCCCCCCcHHHHHHHHHH
Confidence 3688899999977 999999999999763211 0124556788877654 224578999999988754
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=88.96 E-value=0.24 Score=38.38 Aligned_cols=62 Identities=10% Similarity=0.274 Sum_probs=49.6
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|++.+|..|=.+ +.++.++|+..|+.-. ..+.+++.++|..+-.. +.+.++++.|..++.+
T Consensus 6 ~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg---~~~~~ei~~~~~~~D~d------~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 6 ADRERIFKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTD------GDGFISFDEFTDFARA 69 (81)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT---TCCHHHHHHHHHHHCTT------CSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh---cCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHHH
Confidence 3678889999744 8999999999998653 36888999999887521 3467999999999876
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=88.90 E-value=0.1 Score=42.56 Aligned_cols=64 Identities=13% Similarity=0.209 Sum_probs=45.1
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-----CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKED-----KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~-----~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|++|+.+ +.|+.++|+..|+.+...- ..+.+.+.+||..+- ....+.+++++|..++..
T Consensus 11 ~l~~~F~~y~~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D------~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 11 GMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKD------KNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHTCCTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHC------TTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhc------CCCCCcCcHHHHHHHHHH
Confidence 578899999866 8999999999999753210 112334556666543 224578999999988765
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=88.48 E-value=0.2 Score=39.75 Aligned_cols=63 Identities=17% Similarity=0.287 Sum_probs=45.5
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|++|+.. ..++.++|+.+|..+=+. ..+...+.+||...- ..+.+.++|++|..++..
T Consensus 11 ~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~-~~~~~~v~~i~~~~D------~n~DG~IdF~EF~~l~~~ 77 (87)
T d1xk4a1 11 SIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQ-YIRKKGADVWFKELD------INTDGAVNFQEFLILVIK 77 (87)
T ss_dssp HHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCH-HHHTTCHHHHHHHHC------TTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCC-ccchHHHHHHHHHhC------CCCCCcCcHHHHHHHHHH
Confidence 578899999842 468999999999875332 234445777777643 234578999999998764
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.04 E-value=0.65 Score=40.79 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=48.7
Q ss_pred HHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 27 i~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
|..+|+++++. +.++.++|++.|+..-... ..+.+.|+.||..+-.. +.+.|++++|...+.
T Consensus 2 ~~~~F~~~a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~------~~G~i~~~EF~~l~~ 67 (165)
T d1k94a_ 2 VYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRD------HTGKMGFNAFKELWA 67 (165)
T ss_dssp HHHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTT------CSSCBCHHHHHHHHH
T ss_pred hHHHHHHhcCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHhh
Confidence 67899999876 9999999999999764332 34678899999988522 347899999988654
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=87.61 E-value=0.56 Score=39.53 Aligned_cols=67 Identities=18% Similarity=0.372 Sum_probs=53.2
Q ss_pred CCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 20 ASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 20 ~~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
......+|...|+.|-.+ +.++.++|+..|... ++ .++.+++.+|++.+.. ..+.++++.|++.|+|
T Consensus 71 ~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~-g~-~lt~~e~~~l~~~~d~-------~dG~I~y~eF~~~m~s 139 (140)
T d1ggwa_ 71 MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL-GE-KLSNEEMDELLKGVPV-------KDGMVNYHDFVQMILA 139 (140)
T ss_dssp SSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHH-HS-CSCHHHHHHHHHHTTC-------SSCCSTTTHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHhccCCCcchHHHHHHHHHHc-CC-CCCHHHHHHHHHhhCC-------CCCEEeHHHHHHHHhc
Confidence 334566799999999644 899999999999875 44 4799999999987641 1367999999999987
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=87.30 E-value=0.62 Score=35.86 Aligned_cols=61 Identities=21% Similarity=0.441 Sum_probs=48.0
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
|+...|..|=.+ +.++.++|+..|+.. +. ..+.+++.+++..+... +.+.+++++|+.+|.
T Consensus 15 el~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~s~~e~~~~~~~~D~d------~~g~I~~~eF~~~m~ 77 (81)
T d1avsa_ 15 EFKAAFDMFDADGGGDISTKELGTVMRML-GQ-NPTKEELDAIIEEVDED------GSGTIDFEEFLVMMV 77 (81)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHHHCTT------CCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEchhHHHHHHHHc-CC-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHH
Confidence 566778888533 899999999999975 33 47899999999987521 346799999999875
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=87.09 E-value=0.58 Score=38.35 Aligned_cols=67 Identities=13% Similarity=0.247 Sum_probs=52.2
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 21 ~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..+..+|..+|+.|=.+ ++++.++|+.+|+.-. ++ .++.+++.++|..+-. -+.+.+++++|.+.|.
T Consensus 37 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~-~~~~~e~~~~~~~~D~------d~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 37 GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-DLNDTETKALLAAGDS------DHDGKIGADEFAKMVA 107 (109)
T ss_dssp TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC-CCCHHHHHHHHHHHCT------TCSSSEEHHHHHHHHH
T ss_pred CCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccC-cCCHHHHHHHHHHhCC------CCCCCEeHHHHHHHHH
Confidence 34557899999999643 8999999999998642 33 4788899999988742 1347899999999874
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=86.97 E-value=0.58 Score=37.08 Aligned_cols=65 Identities=12% Similarity=0.215 Sum_probs=49.0
Q ss_pred hHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..|..+|.+|+. + +.|+.++|+.-|+..-.. ...+.+.+..+|..+-. -..+.+++++|..+|.+
T Consensus 9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~------d~dG~Idf~EF~~lm~~ 80 (93)
T d1zfsa1 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE------NGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTT------TCCSEECSHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcC------CCCCCCcHHHHHHHHHH
Confidence 468889999963 2 589999999999876432 23577888888887642 23467999999988864
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=86.77 E-value=0.64 Score=38.10 Aligned_cols=67 Identities=12% Similarity=0.242 Sum_probs=52.2
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQ--KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+..+++.+|+.|=.+ ++++.++|+.+|+.-. ++ ..+.+++.++|..+-. -+.+.+++++|..+|.+
T Consensus 38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~-~ls~~ev~~~~~~~D~------d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 38 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR-DLTDAETKAFLKAADK------DGDGKIGIDEFETLVHE 108 (109)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC-CCCHHHHHHHHHHHCT------TCSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCC-CCCHHHHHHHHHHHCC------CCcCcEeHHHHHHHHHh
Confidence 3567899999999633 8999999999997543 33 4788899999987642 23578999999999864
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.38 E-value=0.99 Score=37.30 Aligned_cols=62 Identities=16% Similarity=0.392 Sum_probs=49.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHH
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (605)
+.++..+|..+-.+ +.++.++|+.+|.... ..++.+++..|+..+... +.+.+++++|.++|
T Consensus 78 ~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g--~~l~~~e~~~l~~~~D~d------~dG~i~~~EF~~~m 141 (141)
T d2obha1 78 KEEILKAFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMIDEADRD------GDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--CCCCHHHHHHHHHHHCTT------SSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCccHHHHHHHHHHhC--CCCCHHHHHHHHHHHCCC------CCCCEeHHHHHHhC
Confidence 45688899998744 8999999999998643 357899999999987532 34789999999876
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=85.93 E-value=0.32 Score=39.21 Aligned_cols=64 Identities=14% Similarity=0.262 Sum_probs=43.8
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|.+||+. .+|+..+|+.+|++|=..- ..+.+.+..|+...- ..+.+.++|++|..++..
T Consensus 10 ~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD------~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 10 MIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLD------ANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHC------SSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc------CCCCCcCCHHHHHHHHHH
Confidence 578899999953 5899999999998753221 112344666666543 224578999999988764
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=85.80 E-value=0.43 Score=35.15 Aligned_cols=61 Identities=16% Similarity=0.386 Sum_probs=48.2
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHH
Q 007399 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (605)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (605)
.||..+|+.|=.+ +.++.++|+.-|... +. ..+.+++..++..+... +.+.++++.|++.|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~l-g~-~~~~~e~~~l~~~~D~d------~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNL-GE-KLTDEEVDEMIREADID------GDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TC-CCCHHHHHHHHHTTCTT------CSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHHcCCC------CCCcEeHHHHHHHC
Confidence 5789999999644 899999999998864 44 57899999998876522 34679999999864
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.74 E-value=0.72 Score=34.02 Aligned_cols=62 Identities=16% Similarity=0.349 Sum_probs=49.2
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.++.+|+.|=.+ +.++.++|+..|+.- +. ..+.+++..++..+... +.+.+++++|..+|..
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~l-g~-~~~~~~i~~~~~~~D~d------~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVALAF-SP-YFTQEDIVKFFEEIDVD------GNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHT-CT-TSCHHHHHHHHHHHCCS------SSSEECHHHHHHHHHT
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHHHh-cc-ccchHHHHHHHHHhCCC------CCCeEeHHHHHHHHHH
Confidence 467899999533 999999999999864 44 57999999999988521 3467999999998753
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.39 E-value=0.43 Score=36.27 Aligned_cols=62 Identities=10% Similarity=0.294 Sum_probs=48.4
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
.|+..+|..|=.+ +.++.++|+..|+.. +. ..+.+++.+++..+-. .+.+.+++++|+.+|.
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~-g~-~~t~~e~~~~~~~~D~------~~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 10 AEFKEAFALFDKDNNGSISSSELATVMRSL-GL-SPSEAEVNDLMNEIDV------DGNHQIEFSEFLALMS 73 (77)
T ss_dssp HHHHHHHHHTCTTCSSEEEHHHHHHHHHHH-TC-CCCHHHHHHHHHTTCC------SSCCEEEHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCeEChHHHHHHHHHh-CC-CCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHH
Confidence 3677789988543 899999999999875 44 4788899999887642 1346799999999874
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=85.34 E-value=1.2 Score=37.81 Aligned_cols=64 Identities=16% Similarity=0.396 Sum_probs=49.0
Q ss_pred chHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|+.|= .+ +.|+.++|+.+|... +. ..+.+.+..||..+... +.+.+++++|..+|.+
T Consensus 95 ~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~-~~-~~~~~~~~~l~~~~D~d------~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 95 EEELANCFRIFDKNADGFIDIEELGEILRAT-GE-HVTEEDIEDLMKDSDKN------NDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-TC-CCCHHHHHHHHHHHCTT------CSSSBCHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhh-CC-CCCHHHHHHHHHHhCCC------CCCcEEHHHHHHHHHc
Confidence 345677888884 23 899999999999853 33 46888999999887521 3478999999999865
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=85.24 E-value=0.66 Score=37.36 Aligned_cols=62 Identities=13% Similarity=0.248 Sum_probs=43.7
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHH-----HcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIE-----VQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~---~-~~~~~~~~~~Fl~~-----~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|.+||. + .+|+..+|+..|+. .+.. .+.+.+..|+...-. .+.+.++|.+|..++..
T Consensus 10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~--~d~~~vd~im~~LD~------n~Dg~vdF~EF~~li~~ 80 (95)
T d1qlsa_ 10 SLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQ--KDPGVLDRMMKKLDL------DSDGQLDFQEFLNLIGG 80 (95)
T ss_dssp HHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHC--CCTHHHHHHHHHHCT------TCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHhcC------CCCCcCcHHHHHHHHHH
Confidence 57789999994 2 68999999998864 1211 134567777776542 24467999999888764
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=84.69 E-value=0.66 Score=39.03 Aligned_cols=65 Identities=18% Similarity=0.281 Sum_probs=50.9
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..+.+|..+|+.|-.+ +.++.++|++.|.. -++ ..+.+++..|+.... ...+.+++++|+++|+|
T Consensus 78 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~-~g~-~~~~~e~~~l~~~~~-------d~dG~I~y~eF~~~ll~ 144 (145)
T d2mysc_ 78 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLAT-LGE-KMTEEEVEELMKGQE-------DSNGCINYEAFVKHIMS 144 (145)
T ss_pred chHHHHHHHHHHhhcCCCCEEcHHHHHHHHHH-hCC-CCCHHHHHHHHhhcC-------CCCCeEEHHHHHHHHhc
Confidence 4566799999999744 89999999999986 455 578999999986322 12357999999999986
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=84.07 E-value=1.3 Score=34.10 Aligned_cols=63 Identities=17% Similarity=0.384 Sum_probs=49.0
Q ss_pred chHHHHHHHHhh-C-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 24 PDAVKSMFDQYS-E-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 24 r~ei~~if~~~~-~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..+++..|+.|- . . +.++..+|+.-|+. -|. ..+.+++.+||..+-. ...+.+++++|+.+|.
T Consensus 14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~-lg~-~~t~~el~~~i~~~D~------d~~G~I~f~eFl~im~ 79 (82)
T d1wrka1 14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQ-NPTPEELQEMIDEVDE------DGSGTVDFDEFLVMMV 79 (82)
T ss_dssp HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHH-TTC-CCCHHHHHHHHHTTCT------TCCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHH-cCC-CCCHHHHHHHHHHhCC------CCCCeEeHHHHHHHHH
Confidence 357778899985 3 2 68999999999975 444 4789999999987642 1346899999998875
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=83.52 E-value=0.74 Score=36.44 Aligned_cols=64 Identities=14% Similarity=0.340 Sum_probs=47.3
Q ss_pred HHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC-CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE-DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|++|+. + .+|+..+|+..++.+-.. ...+.+.+.++|...-. .+.+.+++++|...+..
T Consensus 10 ~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~------d~Dg~IdF~EF~~l~~~ 78 (89)
T d1k8ua_ 10 LLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDR------NKDQEVNFQEYVTFLGA 78 (89)
T ss_dssp HHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHH------TTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcC------CCCCCCcHHHHHHHHHH
Confidence 57889999984 2 479999999999975422 12356678888887642 23467999999988765
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.17 E-value=0.76 Score=38.68 Aligned_cols=63 Identities=14% Similarity=0.333 Sum_probs=50.2
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
++.++..+|+.|=.+ +.|+.++|+..|..... .++.+.+.+|+..+. . +.+.++++.|..+|.
T Consensus 81 ~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~--~~~~~~~~~~~~~~d-d------~dG~I~~~eF~~~m~ 145 (146)
T d1lkja_ 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE--KLTDAEVDDMLREVS-D------GSGEINIQQFAALLS 145 (146)
T ss_dssp HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTC--SCCHHHHHHHHHHHC-C------SSSEEEHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC--cccHHHHHHHHHhcc-C------CCCeEeHHHHHHHhC
Confidence 356788999999533 89999999999987654 478899999998775 2 235699999999874
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=82.87 E-value=1.5 Score=38.54 Aligned_cols=73 Identities=10% Similarity=0.108 Sum_probs=57.0
Q ss_pred ccCccCCCCchHHHHHHHHhh-CC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHH
Q 007399 15 RFHVAASEAPDAVKSMFDQYS-EN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKY 92 (605)
Q Consensus 15 ~~~~~~~~~r~ei~~if~~~~-~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~ 92 (605)
.|.+.+.+...+|..+|+.+= .+ +.++.++|...|+.. ....+.+.+..|+..+... ..+.+++..|..+
T Consensus 8 ~p~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l--~~~~s~~~~~~l~~~~d~d------~~~~i~~~ef~~~ 79 (182)
T d1y1xa_ 8 APSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSA--GVPFSLATTEKLLHMYDKN------HSGEITFDEFKDL 79 (182)
T ss_dssp STTCCSSCTTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBT--TBCCCHHHHHHHHHHHCTT------CSSSBCHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHh--cccCchhhhhhhhcccccc------ccccccccccccc
Confidence 566777888899999999983 34 999999999999753 2357889999999887522 2367999999887
Q ss_pred Hcc
Q 007399 93 LFG 95 (605)
Q Consensus 93 L~s 95 (605)
+..
T Consensus 80 ~~~ 82 (182)
T d1y1xa_ 80 HHF 82 (182)
T ss_dssp HHH
T ss_pred ccc
Confidence 653
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=82.10 E-value=1.4 Score=35.81 Aligned_cols=68 Identities=16% Similarity=0.265 Sum_probs=52.9
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcC-CCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQK-EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~-~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+..+++.+|+.|=.+ +.++.++|+.+|+.... ....+.+.+..|++.+-.. +.+.+++++|+..|..
T Consensus 38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d------~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKD------GDGKIGVEEFSTLVAE 108 (109)
T ss_dssp SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTT------CSSSEEHHHHHHHHHT
T ss_pred CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHHHh
Confidence 3567889999999633 89999999999987543 2246888999999987521 3467999999998864
|