Citrus Sinensis ID: 007445

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600---

MTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQS

cHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHHHHHcccHHHHHHHccccccccccHHHHccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEccccEEEEEEccEEEEEEEcccccccccEEEEEEEEcccccEEEEEEEEcccccccccEEEEEccEEcccccccccEEEEEEEccccEEEEEEccEEEEEEccccccccccEEEEEEccccEEcccccccccccccccccccccccccccccccEEEEEEcccEEEEEEEccccEEEEEEccccccccEEEEEEEEEcccccccccccccccccccccccccccccEEEEccccccEEEEcccccccccEEEEEccccccccEEEEEEcccccEEEEEEEcccccccEEEEEEEcccccccccEEEEEEcccccccccccEEEEcccccEEEccccccccccEEEEEEEcc

cHHHHHHHHHHHHHHHHccccHHHHHHHHcHccccHHHHHHHHHHHHccHHHHHHHHHcccHHHccHHHHcccccccccccccccEEEEHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccEEEccccccccccccccEEEEEccccccEEEEEEEEccEEEEccccEEEEEEEcccccccccEEEEEEEcccccccEEEEEEEcccHccccccEEEEccEEEcccccccEEEEEEEEccccEEEEEEcccEEEEEccccccccccEEEEEEccEEEEEcccccccccccccccccccccccccccccEEEEcccccccEEEEcccccccccEcccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEcccccccccEEEEEccccccccEEEEEEccccccEEEEEccccccEEEEEEccccccHHHHHHHHHHHHcccccccccEEEEEccccccEccccHHccccccEEEEEEccc

MTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLahlfdkpcfLGLLAlqaddisgfhsnthipivigsqmryevtgDQLHKTISMFFMDIVnsshtyatggtsvgefwsdpkrlasnldsnteescTTYNMLKVSRHLFRWTKEIAYADYYErsltngvlgiqrgtepgvmiyllplapgsskersyhhwgtpsdsfwccygtgiesfsklgdsiyfeeegkypgVYIIQYISSrldwksgqivvnqkvdpvvswdpylrVTLTfsskgsglttslnlriptwtssngakatlngqdlplpspgnflsvtktwssddkltiqlpltlrteaiqddrpeyaSIQAILYgpyvlaghsigdwditesatslsdwitpipasynsqLITFTQeygntkfvltnsnqsitmekfpksgtdAALHATFRLILndssgsefsslndfigksvmlepfdspgmlviqhetddelvvtdsfiaqgsSVFHLVAGldggdrtvslesetykGCFVYTAVnlqssestklgcisesteagfnNAASFVIEkglseyhpisfvakganrnFLLApllslrdesytvyfdfqs

MTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLAsnldsnteescTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKvdpvvswdpYLRVTLtfsskgsglttslNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPllslrdesyTVYFDFQS

**TWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSD**************SCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGS**ERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWT********************NFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITM*******TDAALHATFRLILNDS***EFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDF**

MTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSS**************VMLEPFDSPGMLVIQHET******************HLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQS

MTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAP*********HWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQS

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		603
224053368		858	predicted protein [Populus trichocarpa]	1.0	0.702	0.730	0.0
225435510		864	PREDICTED: uncharacterized protein LOC10	0.996	0.695	0.724	0.0
359478753		874	PREDICTED: uncharacterized protein LOC10	1.0	0.689	0.703	0.0
297746368		741	unnamed protein product [Vitis vinifera]	1.0	0.813	0.703	0.0
224075776		858	predicted protein [Populus trichocarpa]	0.996	0.700	0.719	0.0
449448754		868	PREDICTED: uncharacterized protein LOC10	0.998	0.693	0.674	0.0
356541181		854	PREDICTED: uncharacterized protein LOC10	0.990	0.699	0.671	0.0
356541912		854	PREDICTED: uncharacterized protein LOC10	0.990	0.699	0.671	0.0
255544804		759	conserved hypothetical protein [Ricinus	0.943	0.749	0.668	0.0
357472921		617	hypothetical protein MTR_4g065150 [Medic	0.975	0.952	0.651	0.0

>gi\|224053368\|ref\|XP_002297785.1\| predicted protein [Populus trichocarpa] gi\|222845043\|gb\|EEE82590.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/605 (73%), Positives = 512/605 (84%), Gaps = 2/605 (0%)

Query: 1   MTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 60
           M  WMV+YFYNRV+NVI  +S+ERH+Q+LNEE GGMNDVLYKLF IT DPKHL+LAHLFD
Sbjct: 254 MVKWMVDYFYNRVRNVITNFSVERHYQSLNEETGGMNDVLYKLFSITGDPKHLVLAHLFD 313

Query: 61  KPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYA 120
           KPCFLGLLA+QA+DISGFH+NTHIPIVIG+QMRYE+TGD L+K I  FFMDIVNSSH+YA
Sbjct: 314 KPCFLGLLAVQAEDISGFHANTHIPIVIGAQMRYEITGDPLYKDIGTFFMDIVNSSHSYA 373

Query: 121 TGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNG 180
           TGGTSV EFWSDPKRLAS L +  EESCTTYNMLKVSRHLFRWTKE+AYADYYER+LTNG
Sbjct: 374 TGGTSVSEFWSDPKRLASTLQTENEESCTTYNMLKVSRHLFRWTKEMAYADYYERALTNG 433

Query: 181 VLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFE 240
           VLGIQRGTEPGVMIY+LP  PGSSK +SYH WGT  D+FWCCYGTGIESFSKLGDSIYFE
Sbjct: 434 VLGIQRGTEPGVMIYMLPQHPGSSKGKSYHGWGTLYDTFWCCYGTGIESFSKLGDSIYFE 493

Query: 241 EEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFS-SKGSGLTTSLN 299
           EEG+ PG+YIIQYISS LDWKSGQI++NQKVDPVVS DPYLRVT TFS +KGS   ++LN
Sbjct: 494 EEGEAPGLYIIQYISSSLDWKSGQIMINQKVDPVVSSDPYLRVTFTFSPNKGSSQASTLN 553

Query: 300 LRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRP 359
           LRIP WT  +GA AT+N Q L +P+PG+FLSV + WSS DKL++QLP++LRTEAIQDDR 
Sbjct: 554 LRIPVWTHLDGATATINSQSLAIPAPGSFLSVNRKWSSGDKLSLQLPISLRTEAIQDDRH 613

Query: 360 EYASIQAILYGPYVLAGHSIGDWDITE-SATSLSDWITPIPASYNSQLITFTQEYGNTKF 418
           +YASIQAILYGPY+LAGH+ GDW++   SA SLSD ITPIPASYN QL++F+Q+ GN+ F
Sbjct: 614 QYASIQAILYGPYLLAGHTSGDWNLKAGSAGSLSDSITPIPASYNEQLVSFSQDSGNSTF 673

Query: 419 VLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGM 478
           VLTNSNQSITME+ PKSGTDA L ATFR++ NDSS SE   +ND I KSVMLEPFD PGM
Sbjct: 674 VLTNSNQSITMEEHPKSGTDACLQATFRIVFNDSSSSEVLGINDVIDKSVMLEPFDLPGM 733

Query: 479 LVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSE 538
           L++Q   D  L VT+S    GSS+FH+V GLDG D TVSLES + +GC++Y+ VN +S +
Sbjct: 734 LLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSLESGSQEGCYIYSGVNYKSGQ 793

Query: 539 STKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVY 598
           S KL C   S++ GFN  ASFV+ KGLSEYHPISFVA+G  RNFLLAPL SLRDE YT+Y
Sbjct: 794 SMKLSCKLGSSDPGFNQGASFVMNKGLSEYHPISFVAEGDKRNFLLAPLHSLRDEFYTIY 853

Query: 599 FDFQS 603
           F+ Q+
Sbjct: 854 FNIQA 858

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225435510\|ref\|XP_002285548.1\| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359478753\|ref\|XP_002283032.2\| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297746368\|emb\|CBI16424.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224075776\|ref\|XP_002304762.1\| predicted protein [Populus trichocarpa] gi\|222842194\|gb\|EEE79741.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449448754\|ref\|XP_004142130.1\| PREDICTED: uncharacterized protein LOC101207833 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356541181\|ref\|XP_003539059.1\| PREDICTED: uncharacterized protein LOC100781521 [Glycine max]	Back alignment and taxonomy information

>gi\|356541912\|ref\|XP_003539416.1\| PREDICTED: uncharacterized protein LOC100783150 [Glycine max]	Back alignment and taxonomy information

>gi\|255544804\|ref\|XP_002513463.1\| conserved hypothetical protein [Ricinus communis] gi\|223547371\|gb\|EEF48866.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|357472921\|ref\|XP_003606745.1\| hypothetical protein MTR_4g065150 [Medicago truncatula] gi\|355507800\|gb\|AES88942.1\| hypothetical protein MTR_4g065150 [Medicago truncatula]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		603
TAIR\|locus:2182295		865	AT5G12960 [Arabidopsis thalian	0.995	0.693	0.633	1.1e-211
TAIR\|locus:2182280		861	AT5G12950 [Arabidopsis thalian	0.995	0.696	0.628	6.3e-211
UNIPROTKB\|Q2KGY9		633	MGCH7_ch7g196 "Putative unchar	0.578	0.551	0.368	7e-54

TAIR\|locus:2182295 AT5G12960 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2046 (725.3 bits), Expect = 1.1e-211, P = 1.1e-211
 Identities = 384/606 (63%), Positives = 474/606 (78%)

Query:     1 MTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 60
             M T M +YFY RVQNVIKKYS+ERHW +LNEE GGMNDVLY+L+ IT+D K+L LAHLFD
Sbjct:   263 MATGMADYFYGRVQNVIKKYSVERHWLSLNEETGGMNDVLYQLYSITRDSKYLFLAHLFD 322

Query:    61 KPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYA 120
             KPCFLG+LA+QADDISGFH+NTHIPIV+GSQ RYE+TGD LHK I MFFMDIVN+SH+YA
Sbjct:   323 KPCFLGVLAIQADDISGFHANTHIPIVVGSQQRYEITGDLLHKEIPMFFMDIVNASHSYA 382

Query:   121 TGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNG 180
             TGGTSV EFW DPKR+A+ L +  EESCTTYNMLKVSR+LFRWTKE++YADYYER+LTNG
Sbjct:   383 TGGTSVKEFWQDPKRMATTLQTENEESCTTYNMLKVSRNLFRWTKEVSYADYYERALTNG 442

Query:   181 VLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFE 240
             VLGIQRGT+PG MIY+LPL  G SK  +YH WGTP DSFWCCYGTGIESFSKLGDSIYF+
Sbjct:   443 VLGIQRGTDPGRMIYMLPLGKGVSKAVTYHGWGTPYDSFWCCYGTGIESFSKLGDSIYFQ 502

Query:   241 EEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLT--TSL 298
             E+G  P +Y+ QYISS LDWKS  + ++QKV+PVVSWDPY+RVT T SS   G+   ++L
Sbjct:   503 EDGATPALYVTQYISSSLDWKSAGLSISQKVNPVVSWDPYMRVTFTLSSSKVGVAKESTL 562

Query:   299 NLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDR 358
             NLRIP WT+S GAK +LNG+ L +P+ GNFLS+ + W S D++T++LP+++RTEAI+DDR
Sbjct:   563 NLRIPVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQKWKSGDQVTMELPMSIRTEAIKDDR 622

Query:   359 PEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKF 418
             PEYAS+QAILYGPY+LAGH+  DW IT  A +  +WITPIP + NS L+T +Q+ GN  +
Sbjct:   623 PEYASLQAILYGPYLLAGHTSMDWSITTQAKA-GNWITPIPETLNSHLVTLSQQSGNISY 681

Query:   419 VLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGM 478
             VL+NSNQ+I M+  P+ GT  A+ ATFRL+ +DS     SS    IG  VMLEPFD PGM
Sbjct:   682 VLSNSNQTIIMKVSPEPGTQDAVSATFRLVTDDSK-HPISSPEGLIGSLVMLEPFDFPGM 740

Query:   479 LVIQHETDDELVVTDSFIA-QGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSS 537
             +V Q  TD  L V  S  + +GSS F LV+GLDG   +VSL  E+ KGCFVY+   L+  
Sbjct:   741 IVKQ-ATDSSLTVQASSPSDKGSSSFRLVSGLDGKPGSVSLSLESKKGCFVYSDQTLKQG 799

Query:   538 ESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTV 597
                +L C S +T+  F  AASF ++ G+++Y+P+SFV  G  RNF+L+PL SLRDE+Y V
Sbjct:   800 TKLRLECGSAATDEKFKQAASFSLKTGMNQYNPMSFVMSGTQRNFVLSPLFSLRDETYNV 859

Query:   598 YFDFQS 603
             YF  Q+
Sbjct:   860 YFSVQA 865

GO:0003824 "catalytic activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

TAIR\|locus:2182280 AT5G12950 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q2KGY9 MGCH7_ch7g196 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_I0347	hypothetical protein (858 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XVI.1041.1	hypothetical protein (662 aa)	•	0.455
	estExt_fgenesh4_pm.C_LG_VI0086	hypothetical protein (670 aa)	•	0.449
	estExt_fgenesh4_pg.C_LG_X0561	alpha-galactosidase (EC-3.2.1.22) (649 aa)	•	0.408
	gw1.VIII.287.1	annotation not avaliable (630 aa)	•	0.403
	gw1.X.5154.1	annotation not avaliable (619 aa)	•	0.401

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		603
pfam07944		511	pfam07944, DUF1680, Putative glycosyl hydrolase of	1e-108
COG3533		589	COG3533, COG3533, Uncharacterized protein conserve	8e-50

>gnl\|CDD\|219654 pfam07944, DUF1680, Putative glycosyl hydrolase of unknown function (DUF1680)	Back alignment and domain information

 Score =  333 bits (857), Expect = e-108
 Identities = 129/374 (34%), Positives = 189/374 (50%), Gaps = 20/374 (5%)

Query: 5   MVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF 64
           + ++ Y+ V +V+    +++H      E GG+N+ L +L+ +T D ++L LA  F     
Sbjct: 155 LADWLYD-VTSVLGDEQMQKHLYP---EHGGINEALVELYELTGDKRYLDLAKRFIHNRG 210

Query: 65  LGLLALQADDISGFHSNTHIPIVI-GSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGG 123
           L  LA   D + G H NT I   + G+   YE TGD      + FF + V + H Y TGG
Sbjct: 211 LDPLAYGQDHLPGRHQNTAIGHAVRGAADLYEETGDDALLKAAEFFWNNVVTRHMYVTGG 270

Query: 124 TSVG-EFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVL 182
                E +  P  L +       E+C +YNMLK++R +  WT +  YADYYER+L N +L
Sbjct: 271 NGSRHEHFGPPYDLPN--RLAYCETCASYNMLKLTRRMLEWTPDAKYADYYERALYNHIL 328

Query: 183 GIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEE 242
             Q   + G+  Y  PL  G  + R    + TP DS WCC G G E+ +K GD IY   +
Sbjct: 329 AGQSP-DGGMFFYFNPLESGPKRLR--WGYSTPWDSCWCCPGNGAETHAKFGDYIYTHSD 385

Query: 243 GKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRI 302
               G+Y+  YI S  DWK     V  + +    WD   +V LT  +      T L LRI
Sbjct: 386 ---DGLYVNLYIPSTADWKLKGGEVTLRQETNYPWDG--QVRLTVKTAKPAEFT-LYLRI 439

Query: 303 PTWTSSNGAKATLNGQ-DLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEY 361
           P W +  GA  T+NG+  +  P    +LS+T+ W   D++ + LP+ +R EA     P+ 
Sbjct: 440 PGWAA--GATLTVNGKPVVVQPKSDGYLSITREWKKGDRVELTLPMPVRLEAANPLVPDD 497

Query: 362 ASIQAILYGPYVLA 375
           A+  A+L GP VL 
Sbjct: 498 ANKVAVLRGPLVLC 511

The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. Length = 511

>gnl\|CDD\|226063 COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		603
COG3533		589	Uncharacterized protein conserved in bacteria [Fun	100.0
PF07944		520	DUF1680: Putative glycosyl hydrolase of unknown fu	100.0
PF05270		142	AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP	99.74
PF05270		142	AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP	99.41
cd00249		384	AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d	97.61
cd00249		384	AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d	97.22
PF03663		370	Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int	97.16
PF03663		370	Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int	97.02
PF07944		520	DUF1680: Putative glycosyl hydrolase of unknown fu	96.89
COG1331		667	Highly conserved protein containing a thioredoxin	96.29
PF07470		336	Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte	96.28
COG4225		357	Predicted unsaturated glucuronyl hydrolase involve	95.13
PF06662		189	C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I	95.13
cd04791		321	LanC_SerThrkinase Lanthionine synthetase C-like do	94.29
PF07221		346	GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN	93.8
cd04791		321	LanC_SerThrkinase Lanthionine synthetase C-like do	93.79
COG3533		589	Uncharacterized protein conserved in bacteria [Fun	93.33
PF07221		346	GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN	80.34

>COG3533 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

Probab=100.00  E-value=2.1e-85  Score=694.49  Aligned_cols=349  Identities=26%  Similarity=0.457  Sum_probs=320.6

Q ss_pred             ChHHHHHHHHHHHHhhhhhccHHHHHHHhhhcccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCccc
Q 007445            1 MTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHS   80 (603)
Q Consensus         1 ~~~~m~~~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~ha   80 (603)
                      |+.++|||+.+    ++....+   |.++-+++++|+++|++||++|||+|||+||++|.++...+|++.+.|.+.+.||
T Consensus       155 V~~rlADhi~t----vfgp~~~---q~~g~~gH~eielAl~~Ly~~Tg~~rYL~LA~~Fi~~rg~~P~~~rg~e~~~gHA  227 (589)
T COG3533         155 VVCRLADHIAT----VFGPEED---QVPGYCGHPEIELALAELYRLTGDQRYLDLARRFIHQRGVEPLAQRGDELEGGHA  227 (589)
T ss_pred             HHHHHHHhhhh----hcCcccc---ccccccCCCchhHHHHHHHHHhcChHHHHHHHHHHHHhccChhhcCchhhhhhhH
Confidence            46678888865    6666665   4557899999999999999999999999999999999999999999999999999


Q ss_pred             ccccceehhHhHHHHHhCChhHHHHHHHHHHHHhhcceeeecCCCC-CCCCCCCcccccCCCCCccccchhHHHHHHHHH
Q 007445           81 NTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSV-GEFWSDPKRLASNLDSNTEESCTTYNMLKVSRH  159 (603)
Q Consensus        81 nthip~~~G~a~~Y~~Tgd~~y~~aa~~fwd~v~~~h~y~tGG~g~-~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~  159 (603)
                      ++.||+.+|+|++|+++||+.+++++.+||++|+++|+|+|||+|+ .|+|+.+|+|++  .+.|+|||+|||||||++|
T Consensus       228 vr~iyl~~G~A~l~~~~gDds~r~~~~~lW~~~t~k~~YitGG~g~~~E~F~~~ydlpn--~~~yAEtCas~~l~~~a~R  305 (589)
T COG3533         228 VRQIYLYIGAADLAEETGDDSLRQAAEFLWQNVTTRQSYITGGNGSSNEHFGPDYDLPN--RTAYAETCASYNLLKLARR  305 (589)
T ss_pred             HHHHHHhhhHHHHHHHhCCHHHHHHHHHHHHHhhhhheEEecccCCccccCCccccCcc--cchHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999965 599999999998  6799999999999999999


Q ss_pred             HHhhcCCCchHHHHHHHHhccccccCCCCCCCcEEEecCCCCCCCCccCcCCCCCCCCCccccCCCCCCcccccccceEE
Q 007445          160 LFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYF  239 (603)
Q Consensus       160 Lf~~tgD~~YaD~~ERalyN~vla~q~~~~~g~~~Y~~Pl~~g~~k~~~~~~~~t~~~~f~CC~gtg~e~~~kl~~~iY~  239 (603)
                      ||.+++|.+|||+|||+|||++|++|++ |+|+|+|+|||..+..      +...++.+||||.||+.|.++++++|||.
T Consensus       306 ml~~~~d~~yaDvmErALYN~iL~g~sl-Dg~~ffY~nPle~~gr------h~r~~w~~c~CCppn~ar~~as~g~yiY~  378 (589)
T COG3533         306 MLGWGPDSQYADVMERALYNHILAGQSL-DGGMFFYFNPLESGGR------HSRQKWFSCWCCPPNGARSVASIGDYIYT  378 (589)
T ss_pred             HhccCCCchHHHHHHHHHHhccccccCC-CCCeeEEecchhhCCC------ccccccccCCCCCCcHhhhhhhccceEEc
Confidence            9999999999999999999999999997 9999999999975542      22456788999999999999999999999


Q ss_pred             eecCCCCcEEEEEeeCcEEEEEeCceEEEEEeCCCCCCCCceEEEEEEEeCCCCeeeEEEEeccCCccCCCcEEEECCee
Q 007445          240 EEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQD  319 (603)
Q Consensus       240 ~~~~~~~~LyVnLYipS~~~~~~~gv~v~q~t~~~yp~~~~~~V~l~v~~~~~~~~ftL~LRIP~Wa~~~~~~v~VNG~~  319 (603)
                      ..+   ++||||||+.|+++.+..++.|+|+|+  |||++  +|+|+|... .+.+|+|+||||+||.  .++++|||+.
T Consensus       379 ~~~---d~lyvnLy~~S~~~l~~~~v~irqet~--yPw~g--~v~ltv~~~-~p~~~tlaLRlP~W~a--~~tl~vNG~~  448 (589)
T COG3533         379 RAD---DALYVNLYIASTADLPGDDVQIRQETN--YPWSG--QVKLTVERA-QPVLFTLALRLPAWCA--APTLRVNGKE  448 (589)
T ss_pred             cCC---CEEEEEEeecccccccccceEEEeccC--CCCcC--eeEEEEecC-CCceEEEEEecccccC--CcEEEEcCcc
Confidence            976   689999999999999988899999988  99999  999999986 7899999999999999  7999999988


Q ss_pred             cCCCCCCCEEEEEeecCCCCEEEEEecceeEEEecCCCcccccCeE-EEeecceeeeeecc
Q 007445          320 LPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQ-AILYGPYVLAGHSI  379 (603)
Q Consensus       320 ~~~~~~ggy~~I~R~W~~GD~I~L~Lpm~lr~~~~~d~~~~~~~~v-Av~rGPlVlA~~~~  379 (603)
                      +.....+||++|+|.|++||+|+|.|||++|+...|+++..    + ||+|||||||++..
T Consensus       449 ~~~~~~~GYa~i~R~Wq~GDrV~L~LpM~vr~y~nP~~r~~----~GAi~rGPlVyc~e~~  505 (589)
T COG3533         449 VIQTRGKGYARISREWQAGDRVELMLPMPVRIYANPDVRHD----VGAIMRGPLVYCAEAG  505 (589)
T ss_pred             hhhccCCCeeeeeehhcCCCeEEEeecceeEeecCCcchhh----hhhhhcCCeEEEEecC
Confidence            87777899999999999999999999999999888887654    4 99999999998654

>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function	Back alignment and domain information

>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins	Back alignment and domain information

>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins	Back alignment and domain information

>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid	Back alignment and domain information

>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid	Back alignment and domain information

>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function	Back alignment and domain information

>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases []	Back alignment and domain information

>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]	Back alignment and domain information

>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region	Back alignment and domain information

>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases	Back alignment and domain information

>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5	Back alignment and domain information

>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases	Back alignment and domain information

>COG3533 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		603
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
3kmv_A		157	Alpha-L-arabinofuranosidase B; protein:carboydrate	1e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 53.3 bits (127), Expect = 2e-07
 Identities = 75/515 (14%), Positives = 147/515 (28%), Gaps = 135/515 (26%)

Query: 139 NLDSNTEESCTTYN-MLKVSRHLFRWTKEIAYADYYERS-LTNGVLGIQRGTEPGVMIYL 196
           ++D  T E    Y  +L V    F    +        +S L+   +           I +
Sbjct: 6   HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDH---------IIM 56

Query: 197 LPLAPGSSKERSYHHWGTPSDSFWCC--YGT-GIESFSKLGDSI---Y------FEEEGK 244
                  +   +          FW         ++ F  + + +   Y       + E +
Sbjct: 57  SK----DAVSGTLR-------LFWTLLSKQEEMVQKF--VEEVLRINYKFLMSPIKTEQR 103

Query: 245 YPGVYIIQYIS--SRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSL-NLR 301
            P +    YI    RL +   Q+        V    PYL+           L  +L  LR
Sbjct: 104 QPSMMTRMYIEQRDRL-YNDNQVFAK---YNVSRLQPYLK-----------LRQALLELR 148

Query: 302 IPTWTSSNG---------AKATLNGQDLPLPSPGN-F-LSVTKTWSSDDKLTIQLPLTLR 350
                  +G         A        +        F L++    S +  L +   L  +
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208

Query: 351 TEAIQDDRPEYASIQAILYGPYVLAGHSIGDW--------DITESATSLSD-WITPIPAS 401
            +     R +++S          L  HSI                   L +        +
Sbjct: 209 IDPNWTSRSDHSS-------NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 402 YNSQ---LITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGS--- 455
           +N     L+T T+    T F+   +   I+++    + T   + +     L+        
Sbjct: 262 FNLSCKILLT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 456 EFSSLNDF----IGKSV--MLEPFDSPGMLVIQHETDDELV-VTDSFIAQGSSVFHLVAG 508
           E  + N      I +S+   L  +D+      +H   D+L  + +S +            
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDN-----WKHVNCDKLTTIIESSLNV---------- 365

Query: 509 LDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISEST-EAGFNNAASFVIEKGLSE 567
                    LE   Y+  F   +V      S     I        + +     +   +++
Sbjct: 366 ---------LEPAEYRKMFDRLSV-FP--PSAH---IPTILLSLIWFDVIKSDVMVVVNK 410

Query: 568 YHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQ 602
            H  S V K    +      +S+     ++Y + +
Sbjct: 411 LHKYSLVEKQPKES-----TISI----PSIYLELK 436

PyMOL of 1vt4

>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Length = 157	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		603
3kmv_A		157	Alpha-L-arabinofuranosidase B; protein:carboydrate	99.86
1wd3_A		482	Alpha-L-arabinofuranosidase B; beta-sandwich, beta	99.84
3kmv_A		157	Alpha-L-arabinofuranosidase B; protein:carboydrate	99.74
3akh_A		468	Putative secreted alpha L-arabinofuranosidase II;	99.36
1wd3_A		482	Alpha-L-arabinofuranosidase B; beta-sandwich, beta	99.28
3akh_A		468	Putative secreted alpha L-arabinofuranosidase II;	99.21
3k7x_A		349	LIN0763 protein; Q92DQ0, LKR23, NESG, structural g	97.87
1nc5_A		373	Hypothetical protein YTER; structural genomics, he	97.82
2gz6_A		388	N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C	97.55
3pmm_A		382	Putative cytoplasmic protein; structural genomics,	97.33
2gz6_A		388	N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C	97.16
3k7x_A		349	LIN0763 protein; Q92DQ0, LKR23, NESG, structural g	97.14
2zbl_A		421	Putative isomerase; N-acyl-D-glucosamine 2-epimera	96.3
3gt5_A		402	N-acetylglucosamine 2-epimerase; structural genomi	96.16
3gt5_A		402	N-acetylglucosamine 2-epimerase; structural genomi	96.1
2zzr_A		397	Unsaturated glucuronyl hydrolase; alpha barrel; 1.	95.93
2ahf_A		377	Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba	95.9
3k11_A		445	Putative glycosyl hydrolase; structural genomics,	94.94
2zzr_A		397	Unsaturated glucuronyl hydrolase; alpha barrel; 1.	94.43
2ahf_A		377	Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba	93.66
2zbl_A		421	Putative isomerase; N-acyl-D-glucosamine 2-epimera	92.58
1nc5_A		373	Hypothetical protein YTER; structural genomics, he	91.91
1fp3_A		402	N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr	91.68
3pmm_A		382	Putative cytoplasmic protein; structural genomics,	89.49
3h7l_A		586	Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru	87.55
1fp3_A		402	N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr	86.21

>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}	Back alignment and structure

Probab=99.86  E-value=6.8e-22  Score=186.14  Aligned_cols=113  Identities=20%  Similarity=0.321  Sum_probs=101.7

Q ss_pred             CceeeecCCCCCCceEEeecCceeEEEecCCCCCCCceEEEeeccCCCC-CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 007445          465 GKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGD-RTVSLESETYKGCFVYTAVNLQSSESTKLG  543 (603)
Q Consensus       465 g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~-g~vsles~~~pg~~l~~~~~~~~g~~~~l~  543 (603)
                      ++.|+||++++|++||||.+..++|  ++++...+|++|++||||++.+ |+|||||+++||+|||+.     |..|+|+
T Consensus         8 ~~~vsl~S~n~p~~ylRh~~~~~~~--~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~-----~~~l~L~   80 (157)
T 3kmv_A            8 ITKAKFQSYNYPNMYIRHANFDARI--DENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHS-----NYDLSLE   80 (157)
T ss_dssp             --CBEEEESSSTTCEEEEETTEEEE--ESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEE-----TTEEEEE
T ss_pred             CccEEEEecCCCCcEEEEeCCeEEE--ccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEe-----CCEEEEe
Confidence            4579999999999999999977666  6677788999999999998865 899999999999999996     9999999


Q ss_pred             eecCCCccccccccceeeccCCCccCCceEEEecCCCceeecc
Q 007445          544 CISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAP  586 (603)
Q Consensus       544 ~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~p  586 (603)
                      +  .++++.|+++|+|..++||++...+||++...++.||..=
T Consensus        81 ~--~~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh~  121 (157)
T 3kmv_A           81 K--NDGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRHY  121 (157)
T ss_dssp             E--CCSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEEE
T ss_pred             c--cCCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEEE
Confidence            7  5788899999999999999999999999999999999763

PyMOL of 3kmv

>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*	Back alignment and structure

>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}	Back alignment and structure

>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*	Back alignment and structure

>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*	Back alignment and structure

>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*	Back alignment and structure

>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}	Back alignment and structure

>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*	Back alignment and structure

>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}	Back alignment and structure

>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A	Back alignment and structure

>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}	Back alignment and structure

>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}	Back alignment and structure

>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*	Back alignment and structure

>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}	Back alignment and structure

>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}	Back alignment and structure

>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*	Back alignment and structure

>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A	Back alignment and structure

>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}	Back alignment and structure

>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*	Back alignment and structure

>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A	Back alignment and structure

>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*	Back alignment and structure

>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*	Back alignment and structure

>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3	Back alignment and structure

>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A	Back alignment and structure

>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}	Back alignment and structure

>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		603
d1wd3a2		162	Alpha-L-arabinofuranosidase B (AbfB), C-terminal d	99.71
d1wd3a2		162	Alpha-L-arabinofuranosidase B (AbfB), C-terminal d	99.36
d1nc5a_		363	Hypothetical protein YteR {Bacillus subtilis [TaxI	97.63
d2d5ja1		377	Unsaturated glucuronyl hydrolase {Bacillus sp. GL1	97.16
d2d5ja1		377	Unsaturated glucuronyl hydrolase {Bacillus sp. GL1	94.93
d2afaa1		411	Putative NAG isomerase YihS {Salmonella typhimuriu	94.89
d1nc5a_		363	Hypothetical protein YteR {Bacillus subtilis [TaxI	88.62
d1ia6a_		431	Nonprocessive cellulase Cel9M {Clostridium cellulo	88.42
d2afaa1		411	Putative NAG isomerase YihS {Salmonella typhimuriu	86.73
d1x9da1		453	Class I alpha-1;2-mannosidase, catalytic domain {H	82.69

>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]}	Back information, alignment and structure

class: All beta proteins
fold: beta-Trefoil
superfamily: AbfB domain
family: AbfB domain
domain: Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain
species: Aspergillus kawachii [TaxId: 40384]

Probab=99.71  E-value=1.6e-17  Score=154.51  Aligned_cols=119  Identities=14%  Similarity=0.133  Sum_probs=99.8

Q ss_pred             cccCCCCce--eeecCCCCCCceEEeecCceeEEEecCCC---CCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeec
Q 007445          459 SLNDFIGKS--VMLEPFDSPGMLVIQHETDDELVVTDSFI---AQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVN  533 (603)
Q Consensus       459 ~p~~~~g~~--v~l~p~~~p~~~v~~~~~~~~l~v~~~~~---~~~~s~f~~vpgl~g~~g~vsles~~~pg~~l~~~~~  533 (603)
                      +|.-..|+.  ++++..++|++||||.+...+|.+....+   ...|++|+|||||++ +|+|||||+++||.||||.  
T Consensus         4 g~~l~~G~~~slr~~s~~y~~rylrH~~~~~~l~~v~~~s~~~~k~dasf~v~~Gl~~-~~~vSfES~n~Pg~yLRH~--   80 (162)
T d1wd3a2           4 GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-SQCFSFESVDTPGSYIRHY--   80 (162)
T ss_dssp             SSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-TTSEEEEESSSTTEEEEEE--
T ss_pred             CCccccCceEEEEEeCCCCCceEEEEcCCcEEEEeccCCcchhhcccceEEEccCcCC-CCeEEEEEcCCCCcEEEEE--
Confidence            344456664  45689999999999999888876543222   357899999999998 7999999999999999996  


Q ss_pred             cCCCCcEEEEeecCCCccccccccceeeccCCCccCCceEEEecCCCceeecc
Q 007445          534 LQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAP  586 (603)
Q Consensus       534 ~~~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~p  586 (603)
                         +..|+|. + +++++.|.++|||..++|| ....+||+...-+..||.+=
T Consensus        81 ---n~~l~L~-~-~d~s~~F~~DATF~~~~gl-~~~g~SfeS~n~p~~YlRH~  127 (162)
T d1wd3a2          81 ---NFELLLN-A-NDGTKQFHEDATFCPQAAL-NGEGTSLRSWSYPTRYFRHY  127 (162)
T ss_dssp             ---TTEEEEE-E-CCCCHHHHHHTCEEEEECT-TSSSEEEEESSSTTCEEEEE
T ss_pred             ---CCEEEEe-c-CCCccccccCceEEEeeCc-CCCceEEEEecCCCceEEee
Confidence               8899999 5 5888999999999999999 55789999999999998653

PyMOL of d1wd3a2

>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]}	Back information, alignment and structure

>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]}	Back information, alignment and structure

>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]}	Back information, alignment and structure

>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]}	Back information, alignment and structure

>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure