Citrus Sinensis ID: 007586

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------
MEEDKKVNKMNSGMPDIDTVFECVIPYVEDPKDRDAISLVCRRWYELDATTRRHITIALCYTTTPARLRRRFRNLESLKLKGKPRAAMFNLIPEDWGGYVTPWVEEIAASFNSLKSIHFRRMIVRDSDLEVLAKNRGKNLLVLKLDKCCGFSTDGLLHVSRSCRQLRTLFLEESSIFEKDGDWLHELALYNTVLETLNFYMTDLIKVNVEDLELIARNCRSLSSVKINDCELLDLVNFFQIATALEEFCGGSFNHPPEKYSAVAFPRSICRLGLSYMEQDHMWIIFPFAAMLKKLDLLYALLNTEDHCLLIQRCPNLEILETRNVIGDRGLEVLARSCKKLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLDREEKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVGETDEGLIAFSRGCPNLRKLEMRGCSFSEYALAAAVMQLTSLRYLWVQGYRASKDGRDILRMVRPFWNIELIPPRLVSDTDQLGNPIVIEHPAHILAYYSLAGQRTDFPETVRPLDTESLLSVQSCT
ccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHcccccEEEEcccccccccccccccccccccHHHHHHHHHcccccEEEEccccccccHHHHHHHHccccccEEEEcccccccHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHccccccEEECcccccccHHHHHHHHccccccccccccccccHHHHccccccEEEEccccccHHHHHHHHHccccccEEEccccccccHHHHHHHHccccccEEEccccccHHHHHHHHHccccccEEEEcccccccccccccccccHHHHHHHHHccccccEEEEEccccccHHHHHHHHHccccccccEEcccccccccccccHHHHHHHHHccccccEEEEccccccccHHHHHHHHHcHHHHHHHHHccccccHHHHHHHHHccccccEEEEccccccHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHcccccEEEEcccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccc
****************IDTVFECVIPYVEDPKDRDAISLVCRRWYELDATTRRHITIALCYTTTPARLRRRFRNLESLKLKGKPRAAMFNLIPEDWGGYVTPWVEEIAASFNSLKSIHFRRMIVRDSDLEVLAKNRGKNLLVLKLDKCCGFSTDGLLHVSRSCRQLRTLFLEESSIFEKDGDWLHELALYNTVLETLNFYMTDLIKVNVEDLELIARNCRSLSSVKINDCELLDLVNFFQIATALEEFCGGSFNHPPEKYSAVAFPRSICRLGLSYMEQDHMWIIFPFAAMLKKLDLLYALLNTEDHCLLIQRCPNLEILETRNVIGDRGLEVLARSCKKLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLDREEKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVGETDEGLIAFSRGCPNLRKLEMRGCSFSEYALAAAVMQLTSLRYLWVQGYRASKDGRDILRMVRPFWNIELIPPRLVSDTDQLGNPIVIEHPAHILAYYSLAGQRTDFPETVRPLDTESLLSVQSC*
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MEEDKKVNKMNSGMPDIDTVFECVIPYVEDPKDRDAISLVCRRWYELDATTRRHITIALCYTTTPARLRRRFRNLESLKLKGKPRAAMFNLIPEDWGGYVTPWVEEIAASFNSLKSIHFRRMIVRDSDLEVLAKNRGKNLLVLKLDKCCGFSTDGLLHVSRSCRQLRTLFLEESSIFEKDGDWLHELALYNTVLETLNFYMTDLIKVNVEDLELIARNCRSLSSVKINDCELLDLVNFFQIATALEEFCGGSFNHPPEKYSAVAFPRSICRLGLSYMEQDHMWIIFPFAAMLKKLDLLYALLNTEDHCLLIQRCPNLEILETRNVIGDRGLEVLARSCKKLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLDREEKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVGETDEGLIAFSRGCPNLRKLEMRGCSFSEYALAAAVMQLTSLRYLWVQGYRASKDGRDILRMVRPFWNIELIPPRLVSDTDQLGNPIVIEHPAHILAYYSLAGQRTDFPETVRPLDTESLLSVQSCT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Coronatine-insensitive protein 1 Required for jasmonate-regulated plant fertility and defense processes, and for coronatine and/or other elicitors perceptions/responses. Seems to not be required for meiosis. Required for the regulation of some genes induced by wounding, but not for all. Component of SCF(COI1) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (probably including the ribulose bisphosphate carboxylase small chain 1B RBCS-1B and the histone deacetylase HDA6). These SCF complexes play crucial roles in regulating response to jasmonate, and their interactions with the COP9 signalosome (CSN) appear to be important for their activity. Interacts with TIFY10A and inositol pentakisphosphate to form a high-affinity jasmonates coreceptor. Involved in the regulation of plant gene expression during plant-pathogen interactions with Pseudomonas syringae and Alternaria brassicicola.confidentO04197

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3OGK, chain B
Confidence level:very confident
Coverage over the Query: 10-545,561-587
View the alignment between query and template
View the model in PyMOL