Citrus Sinensis ID: 007598

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590------
Protein Sequence
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEEEEccccccccccccEEEEEEcccccHHcccccccccccccccEEEEEEEEHHHcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHccccccccccccEEEEEEEEEEEccEEccccccccccccccEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHccccccEcEEEEEEEEcccccccccHccccccccEEEEEccccccccccccccccccccEEEEcccccEEEccccEEEEEEEEEEEcccccccccccEEEEEEEcccHHHccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHccccccccEEEccccccccccEEEEEEEEEEccEEEccccccccccccccEEEEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEcc
Coil and Loop (DISEMBL)
mgrefastslapgfrfhptdEELVRYYLKRKVchrslrfnpicvtdiyksepwdlpdksslktrdkEWYFFSMLdkkygngsrtnratekgywkttgkdrpvhhntrtvgMKKTLVYhmgraphgertnwVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQLVEIDWLLVVLGKDTFVLCRIFqksgsgpkngeqygapfieeeweddeavdaalvpghdvvadelvvsddayfetndldqnidvanqsenaprhlnfyhgessnhvehsrdlspdnqkpmigvgatqhnselmdarpvkdeyidssngvnaggvnyflnepyldatdnpqfsdglyleandlsstveadsqgFDMVEEYLNFfdanddnseyltfdaseilgsgdnnsdqvplttevTEVTDQMSMAGQHQvevhgndvastseqkpdivksesdvkypFLKQASQMLGNvaaapafasefptkDAALRLnslahpsssvhvtAGMIRIRNItlsgsgldwsvgkngdmnIVFSFdlsqnvispsptsfepagnifsgktgSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Flexible Loop (DISEMBL)
mgrefastslapgfrfhptdEELVRYYLKRkvchrslrfnpicvtdiyksepwdlpdksslktrdkEWYFFSMldkkygngsrtnratekgywkttgkdrpvhhntrtvgmkktlVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQLVEIDWLLVVLGKDTFVLCRIfqksgsgpkngeqYGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEIlgsgdnnsdqvPLTTEVTEVTDQMSMAGQHQVEVHGndvastseqkpdivkseSDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Low Complexity Region (SEG)
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIvlvfdqlslslffflvflqlvEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIeeeweddeavdaaLVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGsvvfrslwlllflwiiilsvGFKIGACVSAK
Disordered region (IsUnstruct)
************GFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPD***LKTRDKEWYFFSMLDKKYGN*********KGYWKTTGK*RPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQLVEIDWLLVVLGKDTFVLCRIFQK**********YGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNI****************************************************************NGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDA**************************************************************F*******LGNVAAAPAFA********ALRLN*L****SSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVIS*****FEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACV***
Disordered Region (DISOPRED)
************GFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDD*********RSWRTLFGICVFICIVL*****************************KDTFVLCRI**********************************************************************************************************************************************************YLE**D***************EEYLNFFDANDDNSEYLTFDAS*************************************************************FLKQASQMLGNVAAAPAF****************************MIRIRN*************KNGDMNIVFSFDL*********************KTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Disordered Region (DISEMBL)
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGE*************DNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Disordered Region (DISPRO)
********SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVL*****************************KDTFVLCRIFQKSGS*****EQYGAPFI***********AA***********LVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVE**RDLSPDNQKPMIGVGATQHNSELMD****KDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVT*************************************VKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNV**************FSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	596	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	yes	no	0.872	0.917	0.444	1e-127
Q8H4S4	425	NAC transcription factor	no	no	0.234	0.329	0.531	5e-40
Q52QH4	318	NAC domain-containing pro	no	no	0.233	0.437	0.552	7e-40
Q7GCL7	489	NAC domain-containing pro	no	no	0.224	0.274	0.522	8e-40
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.234	0.410	0.510	9e-40
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.251	0.491	0.496	1e-39
A2YMR0	425	NAC transcription factor	N/A	no	0.298	0.418	0.415	2e-39
Q9FLJ2	336	NAC domain-containing pro	no	no	0.223	0.395	0.570	2e-39
Q5Z6B6	276	NAC domain-containing pro	no	no	0.231	0.5	0.521	1e-38
Q9FRV4	310	Protein CUP-SHAPED COTYLE	no	no	0.211	0.406	0.576	2e-38

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score =  457 bits (1175), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 286/643 (44%), Positives = 369/643 (57%), Gaps = 123/643 (19%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++  +F+ I VTDIYKSEPWDLPDKS 
Sbjct: 1   MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFL 180
           RAP GERTNWVMHEYRL+D+DL+KAGV Q                               
Sbjct: 120 RAPRGERTNWVMHEYRLSDEDLKKAGVPQ------------------------------- 148

Query: 181 VFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVP 240
                            + +VLCRIFQKSG+GPKNGEQYGAP++EEEWE+D       VP
Sbjct: 149 -----------------EAYVLCRIFQKSGTGPKNGEQYGAPYLEEEWEED---GMTYVP 188

Query: 241 GHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVE------HSR 294
             D  ++ L ++DD Y + +D+D+  +     +  P   N+ HGESSN+VE         
Sbjct: 189 AQDAFSEGLALNDDVYVDIDDIDEKPENLVVYDAVPILPNYCHGESSNNVESGNYSDSGN 248

Query: 295 DLSPDN-------------------QKPMIGVGATQHNSELMDAR---PVKDEYI----D 328
            + P N                   +KP+I  G+ Q  S   + +    V+DE +     
Sbjct: 249 YIQPGNNVVDSGGYFEQPIETFEEDRKPIIREGSIQPCSLFPEEQIGCGVQDENVVNLES 308

Query: 329 SSNGVNAGGV---------NYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDM 379
           S+N V              NY  +EP++D  +N   +DGLYLE NDLS   + D   F+ 
Sbjct: 309 SNNNVFVADTCYSDIPIDHNYLPDEPFMDPNNNLPLNDGLYLETNDLSCAQQDD---FNF 365

Query: 380 VEEYLNFFDANDDNSEYLTFDASEILGSGD-----NNSDQVPLTTEVTEVTDQMSMAGQH 434
            E+YL+FFD      E LTFD S ++G  D        DQ P   E+    ++    G+ 
Sbjct: 366 -EDYLSFFD-----DEGLTFDDSLLMGPEDFLPNQEALDQKPAPKEL----EKEVAGGKE 415

Query: 435 QVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRL 494
            VE   +   S+S+Q  D    +S  KYPFLK+ S MLG +    +FAS+F TKD A+RL
Sbjct: 416 AVEEKESGEGSSSKQDTDFKDFDSAPKYPFLKKTSHMLGAIPTPSSFASQFQTKD-AMRL 474

Query: 495 NSLAHPSSSVHVTAGMIRIRNITLSG-SGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSF 553
           ++ A  S SVHVTAGM+RI N+TL+  SG+ WS  KNG++N+V SF + Q          
Sbjct: 475 HA-AQSSGSVHVTAGMMRISNMTLAADSGMGWSYDKNGNLNVVLSFGVVQQ--------- 524

Query: 554 EPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK 596
           + A      KTG    R++ + + LW+++LSV FKI   VSA+
Sbjct: 525 DDAMTASGSKTGITATRAMLVFMCLWVLLLSVSFKIVTMVSAR 567

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  166 bits (420), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/145 (53%), Positives = 97/145 (66%), Gaps = 5/145 (3%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           L PGFRFHPTDEELV +YLK+K     L    I   D+YK +PWDLP+K++    ++EWY
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFG--EQEWY 86

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRT---VGMKKTLVYHMGRAPHGE 126
           FFS  D+KY NG+R NRA   GYWK TG D+P+  +  T   VG+KK LV++ G+ P G 
Sbjct: 87  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGV 146

Query: 127 RTNWVMHEYRLTDDDLEKAGVAQVR 151
           +TNW+MHEYRLTD     A VA  R
Sbjct: 147 KTNWIMHEYRLTDTSSSAAAVATTR 171

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  166 bits (419), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 98/143 (68%), Gaps = 4/143 (2%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           A  +L PGFRFHPTDEELV +YL RKV  + L    I   D+YK +PWDLP+K+      
Sbjct: 17  AELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGR-- 74

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPV--HHNTRTVGMKKTLVYHMGRAP 123
           KEWYFF+  D+KY NGSR NRA  +GYWK TG D+PV    + RTVG+KK LV++ G+AP
Sbjct: 75  KEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAP 134

Query: 124 HGERTNWVMHEYRLTDDDLEKAG 146
            G +T+W+MHEYRL D D    G
Sbjct: 135 RGVKTDWIMHEYRLADADRAPGG 157

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score =  165 bits (418), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 70/134 (52%), Positives = 94/134 (70%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           L PGF FHP D EL+ +YLK+K+  + + +  I   DIYK EPWDLP K  + T+D +W+
Sbjct: 9   LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWH 68

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTN 129
           FF+  D+KY NGSR+NRAT  GYWK+TGKDR +    +T+G KKTLV+H GR P G RT 
Sbjct: 69  FFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTE 128

Query: 130 WVMHEYRLTDDDLE 143
           W+MHEY + + + +
Sbjct: 129 WIMHEYYIDERECQ 142

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score =  165 bits (418), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 72/141 (51%), Positives = 101/141 (71%), Gaps = 1/141 (0%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSL-KTRDKEW 68
           + PGFRFHPTDEEL+ YYLK+K+ ++      I   D+ K EPWDL ++  +  T   EW
Sbjct: 9   VPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKIGSTPQNEW 68

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY  GSRTNRAT  G+WK TG+D+ + ++ + +GM+KTLV++ GRAPHG++T
Sbjct: 69  YFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 128

Query: 129 NWVMHEYRLTDDDLEKAGVAQ 149
           +W+MHEYRL D D  +A  ++
Sbjct: 129 DWIMHEYRLEDADDPQANPSE 149

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score =  165 bits (417), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/155 (49%), Positives = 107/155 (69%), Gaps = 5/155 (3%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSL-KTRDKEW 68
           + PGFRFHPTDEEL+ YYLK+K+ +       I   D+ K EPWDL D+  +  T   EW
Sbjct: 8   VPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEW 67

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY  GSRTNRAT  G+WK TG+D+ + ++ + +GM+KTLV++ GRAPHG++T
Sbjct: 68  YFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 127

Query: 129 NWVMHEYRL--TDDDLEKAG--VAQVRSWRTLFGI 159
           +W+MHEYR+  T+DD  + G  V +V   + LF +
Sbjct: 128 DWIMHEYRIEDTEDDPCEDGWVVCRVFKKKNLFKV 162

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  164 bits (415), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 117/214 (54%), Gaps = 36/214 (16%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           L PGFRFHPTDEELV +YLK+K     L    I   D+YK +PW+LP+K++    ++EWY
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFG--EQEWY 86

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRT---VGMKKTLVYHMGRAPHGE 126
           FFS  D+KY NG+R NRA   GYWK TG D+P+  +  T   VG+KK LV++ G+ P G 
Sbjct: 87  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGV 146

Query: 127 RTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQLV 186
           +TNW+MHEYRLTD     A VA  R             + L  D                
Sbjct: 147 KTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLD---------------- 190

Query: 187 EIDWLLVVLGKDTFVLCRIFQKS---GSGPKNGE 217
             DW          VLCRI++K+   G+G ++ E
Sbjct: 191 --DW----------VLCRIYKKTNKAGAGQRSME 212

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  164 bits (415), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 94/135 (69%), Gaps = 2/135 (1%)

Query: 3   REFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLK 62
           +E     L PGFRFHPTDEEL+ +YL +KV   S     I   D+ KSEPW+LP  +  K
Sbjct: 9   KEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMA--K 66

Query: 63  TRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRA 122
             +KEWYFF + D+KY  G RTNRATE GYWK TGKD+ ++     VGMKKTLV++ GRA
Sbjct: 67  MGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRA 126

Query: 123 PHGERTNWVMHEYRL 137
           P G++TNWVMHEYRL
Sbjct: 127 PKGQKTNWVMHEYRL 141

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Z6B6|NAC76_ORYSJ NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2

 Score =  161 bits (407), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 73/140 (52%), Positives = 103/140 (73%), Gaps = 2/140 (1%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
            + S+ PGFRFHPTDEEL+ YYL++KV + ++  + I   D+ K EPWDL D+  + T  
Sbjct: 6   GALSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGP 65

Query: 66  K-EWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVH-HNTRTVGMKKTLVYHMGRAP 123
           + EWYFFS  DKKY  G+RTNRAT  G+WK TG+D+ +   N   +GM+KTLV+++GRAP
Sbjct: 66  QNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAP 125

Query: 124 HGERTNWVMHEYRLTDDDLE 143
           HG++T+W+MHEYRL  D+++
Sbjct: 126 HGKKTDWIMHEYRLDQDNVD 145

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FRV4|NAC54_ARATH Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1

 Score =  161 bits (407), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 75/130 (57%), Positives = 94/130 (72%), Gaps = 4/130 (3%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           + PGFRFHPTDEEL+ YYL +KV   +     I   D+ KSEPW+LP+K+  K  +KEWY
Sbjct: 20  MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKA--KMGEKEWY 77

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRT--VGMKKTLVYHMGRAPHGER 127
           FF++ D+KY  G RTNRATE GYWK TGKDR +  +     +GMKKTLV++ GRAP GE+
Sbjct: 78  FFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEK 137

Query: 128 TNWVMHEYRL 137
           + WVMHEYRL
Sbjct: 138 SCWVMHEYRL 147

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	596
255583748	514	conserved hypothetical protein [Ricinus	0.818	0.949	0.545	1e-172
224109872	551	NAC domain protein, IPR003441 [Populus t	0.885	0.958	0.532	1e-168
224100709	565	NAC domain protein, IPR003441 [Populus t	0.877	0.925	0.512	1e-163
359486687	559	PREDICTED: NAC domain-containing protein	0.909	0.969	0.507	1e-160
302399033	607	NAC domain class transcription factor [M	0.895	0.879	0.489	1e-158
147802301	573	hypothetical protein VITISV_021988 [Viti	0.889	0.924	0.509	1e-155
449532398	566	PREDICTED: NAC domain-containing protein	0.904	0.952	0.491	1e-145
449449383	524	PREDICTED: NAC domain-containing protein	0.820	0.933	0.511	1e-138
449465328	555	PREDICTED: NAC domain-containing protein	0.889	0.954	0.497	1e-136
297806417	568	hypothetical protein ARALYDRAFT_908325 [	0.874	0.917	0.446	1e-126

>gi|255583748|ref|XP_002532627.1| conserved hypothetical protein [Ricinus communis] gi|223527647|gb|EEF29758.1| conserved hypothetical protein [Ricinus communis]

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 333/611 (54%), Positives = 402/611 (65%), Gaps = 123/611 (20%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           ++ SLAPGFRFHPTDEELVRYYLKRKV ++  RF+ I V DIYK+EPWDLPDKS LKTRD
Sbjct: 7   SAASLAPGFRFHPTDEELVRYYLKRKVTNKPFRFDAIAVVDIYKTEPWDLPDKSKLKTRD 66

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
            EWYFFSMLDKKYGNGS+TNRATEKGYWKTTGKDRPV  N+R VGMKKTLVYH+GRAP G
Sbjct: 67  LEWYFFSMLDKKYGNGSKTNRATEKGYWKTTGKDRPVRWNSRNVGMKKTLVYHLGRAPRG 126

Query: 126 ERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQL 185
           ERTNWVMHEYRLTD+DLEKAG+ Q                                    
Sbjct: 127 ERTNWVMHEYRLTDEDLEKAGIVQ------------------------------------ 150

Query: 186 VEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVPGHDVV 245
                       D FVLCRIFQKSG+GPKNGEQYGAPF+EEEW++D+ V   L+PG ++V
Sbjct: 151 ------------DAFVLCRIFQKSGTGPKNGEQYGAPFVEEEWDNDDEV--VLLPGEEMV 196

Query: 246 -ADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPM 304
             DELV+ DDAY ETNDLDQN DVA  S+NA   +NFYHGE+SN+VE S + S D++KP+
Sbjct: 197 MTDELVLGDDAYGETNDLDQNFDVAVVSDNAALPVNFYHGETSNYVEQSGNSSGDDKKPV 256

Query: 305 IGVGATQHNSEL--------------MDARPVKDEYI-DSSNGVNAGGVNYFLNEPYLDA 349
           I  G  Q+ S+L              +DA+ V+ EYI +SSN V+A   NY L+EP+LDA
Sbjct: 257 IDRGGAQYCSDLPDDKVLFSFPEQYEIDAKSVRHEYIAESSNNVDATDDNYLLDEPFLDA 316

Query: 350 TDNPQFSDGLYLEANDLSSTVEADSQG----FDMVEEYLNFFDANDDNSEYLTFDASEIL 405
           TDNP F++GL+LEANDLS+ VE ++ G    F+MV+EYLNFFDANDDN   LTFD SEIL
Sbjct: 317 TDNPPFNEGLFLEANDLSNPVEPETAGDSTIFEMVDEYLNFFDANDDN---LTFDPSEIL 373

Query: 406 GSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFL 465
           GS +  SD   L+                                               
Sbjct: 374 GSENIVSDGASLS----------------------------------------------- 386

Query: 466 KQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDW 525
           ++AS MLG++ A PAFASEFP K  AL+LN  A  SSS+ VTAGMIRI +IT    G+DW
Sbjct: 387 EKASHMLGSIPAPPAFASEFPLKGTALQLNG-APSSSSIRVTAGMIRIESITFGSDGMDW 445

Query: 526 SVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSV 585
           S GKNG++NIV SF +SQ  +SP+ ++  PAGN FSGKT S+V R  + L+F W++ILSV
Sbjct: 446 SFGKNGNVNIVLSFVMSQGNVSPAGSA--PAGNSFSGKTWSLVSRGWFFLMFFWVLILSV 503

Query: 586 GFKIGACVSAK 596
            +KIG  +S K
Sbjct: 504 SYKIGTYISTK 514

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109872|ref|XP_002315338.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222864378|gb|EEF01509.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 327/614 (53%), Positives = 399/614 (64%), Gaps = 86/614 (14%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           ++TSLAPGFRFHPTDEELVRYYLKRKV ++  R + I VTD+YKSEPWDLP KS LK+RD
Sbjct: 1   SATSLAPGFRFHPTDEELVRYYLKRKVTNKPFRLDAISVTDVYKSEPWDLPVKSKLKSRD 60

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
            EWYFFSMLDKKYGNG++TNRATEKGYWKTTGKDRP++ N+R VGMKKTLVYH GRAP G
Sbjct: 61  LEWYFFSMLDKKYGNGAKTNRATEKGYWKTTGKDRPINWNSRVVGMKKTLVYHQGRAPRG 120

Query: 126 ERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQL 185
           ER+NWVMHEYRL D++LEKAG+AQ                                    
Sbjct: 121 ERSNWVMHEYRLADEELEKAGIAQ------------------------------------ 144

Query: 186 VEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVPGHDVV 245
                       D FVLCRIFQKSG+GPKNGEQYGAPFIEEEWE+DE     L+P  ++V
Sbjct: 145 ------------DAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWENDE---VPLLPSEEMV 189

Query: 246 -ADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPM 304
            A E  V D +Y E N+LDQN D    SEN    LNFY+GE+SNHVE   + S ++ KP+
Sbjct: 190 PAGEAPVGDGSYLELNELDQNFDSGITSENTALPLNFYYGETSNHVEQPSNFSDNDIKPV 249

Query: 305 IGVGATQHNSEL--------------MDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDAT 350
           I  GA   N                 MDA   K+   +  N VNA   NY  +E YLDA 
Sbjct: 250 I-RGAENRNGPAPPADQNLDLPGQYEMDAD-KKEHNAEPINIVNALNANYLFDESYLDAL 307

Query: 351 DNPQFSDGLYLEANDLSSTVE----ADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILG 406
            +   S+G +LEANDLS  VE     DS GFDMV+EYLNFFDA D+N   ++FD S+I G
Sbjct: 308 GDLPPSEGFFLEANDLSKPVEPETGGDSSGFDMVDEYLNFFDAVDEN---MSFDPSDIFG 364

Query: 407 SGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVK--SESDVKYPF 464
           S    SDQ+P   +V   T+++S A  + +E HG    S+S+QKP+ +K  S +D KYPF
Sbjct: 365 SETAVSDQLPPQEDVKGQTEELSTASLNLLETHGTIDPSSSKQKPEAMKFDSGADFKYPF 424

Query: 465 LKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHP--SSSVHVTAGMIRIRNITLSGSG 522
           +KQAS  LGN+ A PA ASEFP+KDAAL L    HP  SSS++VTAGMIRI N++L G+ 
Sbjct: 425 IKQASHRLGNIPAPPALASEFPSKDAALHL----HPASSSSINVTAGMIRIENMSLGGNE 480

Query: 523 LDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIII 582
           ++WS GKNG++NI+ SF L Q      P S  P  ++F GKT SVV R    L+F W++I
Sbjct: 481 MEWSFGKNGNVNIILSFGLPQQG---GPASLVPMNSLFPGKTESVVSRGWLYLMFFWVLI 537

Query: 583 LSVGFKIGACVSAK 596
           LSV +KIG C+ AK
Sbjct: 538 LSVSYKIGTCICAK 551

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100709|ref|XP_002311983.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222851803|gb|EEE89350.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 327/638 (51%), Positives = 400/638 (62%), Gaps = 115/638 (18%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR  ++TSLAPGFRFHPTDEELVRYYLKRKV ++  RF+ I VTDIYKSEPWDLPDKS 
Sbjct: 1   MGRSDSATSLAPGFRFHPTDEELVRYYLKRKVTNKPFRFDAISVTDIYKSEPWDLPDKSK 60

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFSMLDKKYGNGS+TNRATEKGYWKTTGKDRP+  N++ VGMKKTLVYH G
Sbjct: 61  LKSRDLEWYFFSMLDKKYGNGSKTNRATEKGYWKTTGKDRPIRQNSQVVGMKKTLVYHQG 120

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFL 180
           RAP G+R+NWVMHEYRL D++LEKAG+AQ                               
Sbjct: 121 RAPRGQRSNWVMHEYRLVDEELEKAGIAQ------------------------------- 149

Query: 181 VFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVP 240
                            D FVLCRIFQKSG+GPKNGEQYGAPFIEEEW+DDE     L+P
Sbjct: 150 -----------------DAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWDDDEV---PLLP 189

Query: 241 GHD-VVADELVVSDDAYFETNDLDQ------------------------NIDVANQSENA 275
             + V+ +E  V DDAY E N+L Q                        N D    SEN 
Sbjct: 190 SEEMVLTEEAPVGDDAYLEMNELGQVCTCIVTCVSVTCSLGSICHQTSHNFDTGITSENT 249

Query: 276 PRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSEL-----------MDARPVKD 324
               NFY+GE+SN+VE  RD S D+ KPM+     +H   L            +   VK+
Sbjct: 250 ALPQNFYYGEASNYVEQPRDFSEDDLKPMLRGAENRHGPSLPAEENLDLPGQYETDAVKN 309

Query: 325 EYIDSS--NGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVE----ADSQGFD 378
           EY ++   N VNA  VNY  +E YLDA +N   S+GL+LEANDLS+ VE     DS GFD
Sbjct: 310 EYNNAEPMNNVNAVDVNYLFDESYLDALNNLPQSEGLFLEANDLSNPVEPETGGDSSGFD 369

Query: 379 MVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEV 438
           M+EEYLNFFDA+D+N   ++FD S+I  S    S+Q P   E    TD++  A Q  +E 
Sbjct: 370 MLEEYLNFFDADDEN---MSFDPSDIFASDTAVSNQQPPPQEGG--TDEVLKAIQKPLET 424

Query: 439 HGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLA 498
           HGN   S+S+QKP+ ++ +SD KYPF+KQAS MLG + A PA ASEFP+KDAALRL S +
Sbjct: 425 HGNVGPSSSKQKPEAMEFDSDFKYPFIKQASHMLGKIPAPPALASEFPSKDAALRLRSAS 484

Query: 499 HPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGN 558
             SSS+HVTAG+IRI N++L G+G +WS GKNG+++++ SF L Q               
Sbjct: 485 --SSSIHVTAGVIRIENMSLGGNGTEWSFGKNGNVDVILSFGLPQQE------------- 529

Query: 559 IFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK 596
              G   SVV R    L+F W++ILSV +KIG C+ AK
Sbjct: 530 --GGPAKSVVSRGWLFLMFFWVLILSVSYKIGTCICAK 565

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486687|ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-like [Vitis vinifera] gi|296085948|emb|CBI31389.3| unnamed protein product [Vitis vinifera]

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 311/613 (50%), Positives = 401/613 (65%), Gaps = 71/613 (11%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGRE A+ SLAPGFRFHPTDEELV YYLKRKVC +  RF+ I   DIYKSEPWDLP +S 
Sbjct: 1   MGRESAA-SLAPGFRFHPTDEELVWYYLKRKVCGKLFRFDTISEIDIYKSEPWDLPGQSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS+LDKKYGNGSRTNRAT++GYWKTTGKDR V H  RTVGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSVLDKKYGNGSRTNRATDRGYWKTTGKDREVRHRARTVGMKKTLVYHSG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFL 180
           RAP GERTNWVMHEYRL D++L+K GVAQ                               
Sbjct: 120 RAPRGERTNWVMHEYRLMDEELKKTGVAQ------------------------------- 148

Query: 181 VFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVP 240
                            D FVLCRIFQKSGSGPKNGEQYGAPF+EEE  D++      VP
Sbjct: 149 -----------------DAFVLCRIFQKSGSGPKNGEQYGAPFVEEE-WDEDEDVVVFVP 190

Query: 241 GHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDN 300
           G ++ A+E+V   +   E  DL++ +D+    EN P  LNFY+G+ S + E SR  + + 
Sbjct: 191 G-ELAAEEVVAGHEPSDEAVDLEKCLDIGLPPENDPLPLNFYYGDCSKYAEDSRVFNENE 249

Query: 301 QKPMIGVGATQHNSEL--------------MDARPVKDEY-IDSSNGVNAGGVNYFLNEP 345
           QKP IG+      SEL              +DA+ VKDEY ++ SN VN+  V+Y L+EP
Sbjct: 250 QKPFIGMEENHCGSELPNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDVNSVEVDYLLDEP 309

Query: 346 YLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEIL 405
           YLDA++N  F DG +LE +DLS+ VE D  GFD ++EYL F DA+ DN + + F + E++
Sbjct: 310 YLDASENLAFEDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDADGDNLQQMAFGSFEMM 368

Query: 406 GSGDNNSDQVPLTTE-VTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPF 464
           GS +  SD  PL  E V    +++ +  Q   E +G+  AS+S++ P+  + ESD+ YPF
Sbjct: 369 GSENPLSDLAPLDQEPVNGGAEKLPIGSQQLSEAYGDSGASSSKKNPEATEFESDIPYPF 428

Query: 465 LKQAS-QMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGL 523
           +KQAS Q+LG + A  A AS+ PTKD ALRLNS    SSSVH+TAGMI+IR+ TLSG+G+
Sbjct: 429 IKQASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMIQIRDTTLSGNGV 488

Query: 524 DWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIIL 583
           DWS GK+G++N + SF L Q   + +  S EP  ++ SGK G V+ R+ + L+F+W++IL
Sbjct: 489 DWSYGKSGNINFMLSFGLPQGETNSA--SLEPIASLMSGKAGPVISRAGFYLIFIWVLIL 546

Query: 584 SVGFKIGACVSAK 596
           SV +KIG C+ ++
Sbjct: 547 SVSYKIGTCICSR 559

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399033|gb|ADL36811.1| NAC domain class transcription factor [Malus x domestica]

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 320/654 (48%), Positives = 401/654 (61%), Gaps = 120/654 (18%)

Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           SLAPGFRFHPTDEELV YYLKRKV  ++ RF+PI V DIYK+EPWDLP KS LKTRD EW
Sbjct: 8   SLAPGFRFHPTDEELVWYYLKRKVSGKNFRFDPISVIDIYKTEPWDLPGKSKLKTRDLEW 67

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS LDKKYGN SRTNRATEKGYWKTTGKDRPV HN+R VGMKKTLV+H GRAP G RT
Sbjct: 68  YFFSFLDKKYGNSSRTNRATEKGYWKTTGKDRPVKHNSRDVGMKKTLVFHSGRAPTGART 127

Query: 129 NWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQLVEI 188
           NWVMHEYRL++++LEKAG+ Q                                       
Sbjct: 128 NWVMHEYRLSNEELEKAGIQQ--------------------------------------- 148

Query: 189 DWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVPGHDVVAD- 247
                   KD +VLCRIFQKSG+GPKNGE+YGAP +EEEW+DD   D   VPG +  AD 
Sbjct: 149 --------KDPYVLCRIFQKSGTGPKNGEKYGAPVMEEEWDDD---DVTCVPGEEAAADV 197

Query: 248 ----------ELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLS 297
                      + V+D AY E  DLDQN+D    SE+AP   NFY+GE+S+++EHS D  
Sbjct: 198 VALSEEPHVEAICVNDGAYVEAFDLDQNLDTGIPSESAPPPSNFYYGETSHYIEHSGDFV 257

Query: 298 PDNQKPMIGVGAT-------------QHN--------SELM------------------- 317
            D+ K +IG G T             +HN        +E M                   
Sbjct: 258 EDDTKAVIGTGETLEYHGDQMFFNYPEHNETVGNPVKNEYMTSQSPEDLKFVDLPEHNEA 317

Query: 318 DARPVKDE-YIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQG 376
           DA+ VKDE +++ S+  N   VNY LNEPYL+AT+N    DGL+LEANDLS+ VE+ + G
Sbjct: 318 DAKSVKDECFLEPSDDANPAVVNYSLNEPYLNATENTPIGDGLFLEANDLSNPVES-TAG 376

Query: 377 FDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVP----LTTEVTEVT------- 425
           FDM++EYL +FDANDD S+Y+ FD+  ++G  +   D+ P    L    TE         
Sbjct: 377 FDMLDEYLTYFDANDDISQYIDFDSYGMMGVENYVPDEAPADQKLVNGETEPQPMGGEHV 436

Query: 426 --DQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQ-MLGNVAAAPAFA 482
             +   + G+H V+    D AS+S++  +  K ESD  YPF+K+AS  MLG++ A PAFA
Sbjct: 437 QPEPQPLGGEHLVQPVDTDDASSSKKTAEF-KFESDGNYPFIKKASHMMLGSIPAPPAFA 495

Query: 483 SEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLS 542
           SEFP K+A  RLNS A  SSSVHVTA MIRIR+IT S + +DWS GK+G +N+VFS  LS
Sbjct: 496 SEFPGKEAMRRLNSGAASSSSVHVTAAMIRIRDITSSDNRMDWSFGKDGVVNLVFSVQLS 555

Query: 543 QNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK 596
           Q+    +  +  P G   SGKTG VV R  +L +F W++ LS+  KIG+ +  +
Sbjct: 556 QD--DGNSGNLVPVGGSLSGKTGCVVMRGWFLFMFFWVLFLSMSLKIGSYIYTR 607

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147802301|emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 306/601 (50%), Positives = 390/601 (64%), Gaps = 71/601 (11%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGRE A+ SLAPGFRFHPTDEELV YYLKRKVC +  RF+ I   DIYKSEPWDLP +S 
Sbjct: 1   MGRESAA-SLAPGFRFHPTDEELVWYYLKRKVCGKLFRFDTISEIDIYKSEPWDLPGQSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS+LDKKYGNGSRTNRAT++GYWKTTGKDR V H  RTVGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSVLDKKYGNGSRTNRATDRGYWKTTGKDREVRHRARTVGMKKTLVYHSG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFL 180
           RAP GERTNWVMHEYRL D++L+K GVAQ                               
Sbjct: 120 RAPRGERTNWVMHEYRLMDEELKKTGVAQ------------------------------- 148

Query: 181 VFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVP 240
                            D FVLCRIFQKSGSGPKNGEQYGAPF+EEE  D++      VP
Sbjct: 149 -----------------DAFVLCRIFQKSGSGPKNGEQYGAPFVEEE-WDEDEDVVVFVP 190

Query: 241 GHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDN 300
           G ++ A+E+V   +   E  DL++ +D+    EN P  LNFY+G+ S + E SR  + + 
Sbjct: 191 G-ELAAEEVVAGHEPSDEAVDLEKCLDIGLPPENDPLPLNFYYGDCSKYAEDSRVFNENE 249

Query: 301 QKPMIGVGATQHNSEL--------------MDARPVKDEY-IDSSNGVNAGGVNYFLNEP 345
           QKP IG+      SEL              +DA+ VKDEY ++ SN VN+  V+Y L+EP
Sbjct: 250 QKPFIGMEENHCGSELPNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDVNSVEVDYLLDEP 309

Query: 346 YLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEIL 405
           YLDA++N  F DG +LE +DLS+ VE D  GFD ++EYL F DA+ DN + + F + E++
Sbjct: 310 YLDASENLAFEDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDADGDNLQQMAFGSFEMM 368

Query: 406 GSGDNNSDQVPLTTE-VTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPF 464
           GS +  SD  PL  E V    ++  +  Q   E +G+  AS+S++ P   + ESD+ YPF
Sbjct: 369 GSENPLSDLAPLDQEPVNGGAEKXPIGSQQLSEAYGDSGASSSKKNPXATEFESDIPYPF 428

Query: 465 LKQAS-QMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGL 523
           +KQAS Q+LG + A  A AS+ PTKD ALRLNS    SSSVH+TAGMI+IR+ TLSG+G+
Sbjct: 429 IKQASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMIQIRDTTLSGNGV 488

Query: 524 DWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIIL 583
           DWS GK+G++N + SF L Q   + +  S EP  ++ SGK G V+ R+ + L+F+W++IL
Sbjct: 489 DWSYGKSGNINFMLSFGLPQGETNSA--SLEPIASLMSGKAGPVISRAGFYLIFIWVLIL 546

Query: 584 S 584
           S
Sbjct: 547 S 547

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449532398|ref|XP_004173168.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 306/623 (49%), Positives = 392/623 (62%), Gaps = 84/623 (13%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR+ ++TSLAPGFRFHPTDEELV YYLKRKV  +  RF+PI V DIYKSEPWDLP KS 
Sbjct: 1   MGRD-SATSLAPGFRFHPTDEELVSYYLKRKVSGKPFRFDPISVIDIYKSEPWDLPGKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS LDKKYGN SRTNRATEKGYWKTTGKDRPV H+ RTVGMKKTLVYH+G
Sbjct: 60  LKSRDLEWYFFSALDKKYGNSSRTNRATEKGYWKTTGKDRPVRHSARTVGMKKTLVYHIG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFL 180
           RAP G RTNWVMHEY+LTD+++++                                    
Sbjct: 120 RAPRGARTNWVMHEYKLTDEEMDE------------------------------------ 143

Query: 181 VFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVP 240
                 E+  + +V  +D FVLCRIFQKSG+GPKNGEQYGAPFIEEEWE++E +  A+VP
Sbjct: 144 ------EMGKIGIV--QDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWEENEEL--AVVP 193

Query: 241 GHDVVADELVVSDDAYFETNDLDQNIDVANQSENA-PRHLNFYHGESSNHVEHSRDLSPD 299
           G D  ADEL+       E +D  +N++    SE+A P   N+Y+GE+SN +E S +   D
Sbjct: 194 GDDQAADELLGVGGVCIEGDDFSENVEEGILSESAPPPPFNYYYGETSNSIEQSDNYIED 253

Query: 300 NQKPMIGVGATQHNSELMDA--------------RPVKDEYI-DSSNG--------VNAG 336
           +QKP +G+  T   SEL D               R VK EY+ +SSN         VNAG
Sbjct: 254 DQKPAVGICET---SELPDGQKFFVLPDECGLHDRLVKHEYLAESSNDAGANAADEVNAG 310

Query: 337 GVN--YFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNS 394
            ++  Y LNE +   +DN  FSD L LE N+LS+  E+D   FD++EEYL FFDA+ DN 
Sbjct: 311 DMDGRYVLNEAFYSTSDNLSFSDELLLEPNELSNPTESDPADFDVLEEYLTFFDADGDNV 370

Query: 395 EYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIV 454
           + ++FD SEILGSG    DQ   T  V   T+  S + Q     H N  +S+S Q+P+  
Sbjct: 371 D-MSFDPSEILGSGSPIPDQ---TEAVGGATEHASASKQTADLRHDNGASSSSMQRPEDP 426

Query: 455 KSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIR 514
           KSESD+KYPFLK  S MLG++ A   FAS+F +KDAA+ LNS    SSSV VTAGM+ IR
Sbjct: 427 KSESDIKYPFLKHTSHMLGSIPA--PFASQFTSKDAAIHLNSAPQASSSVRVTAGMLVIR 484

Query: 515 NITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRS-LW 573
           NI L+G  ++   GKN D+NI++ + + +  I  S      AG + S K+  ++ R  L+
Sbjct: 485 NIALNGYEVNNMYGKNSDLNIIYLYGIVEGNIDSSQLLPNAAG-VNSSKSEPLISRYFLY 543

Query: 574 LLLFLWIIILSVGFKIGACVSAK 596
             +  W++ILS  FK+  C+ ++
Sbjct: 544 FFILFWVLILSASFKVARCIHSR 566

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449383|ref|XP_004142444.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 294/575 (51%), Positives = 361/575 (62%), Gaps = 86/575 (14%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR+ A TSLAPGFRFHPTDEELV YYLKRKV  +  RF+PI V DIYKSEPWDLP KS 
Sbjct: 1   MGRDSA-TSLAPGFRFHPTDEELVSYYLKRKVSGKPFRFDPISVIDIYKSEPWDLPGKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS LDKKYGN SRTNRATEKGYWKTTGKDRPV H+ RTVGMKKTLVYH+G
Sbjct: 60  LKSRDLEWYFFSALDKKYGNSSRTNRATEKGYWKTTGKDRPVRHSARTVGMKKTLVYHIG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFL 180
           RAP G RTNWVMHEY+LTD+++ K  + Q                               
Sbjct: 120 RAPRGARTNWVMHEYKLTDEEMGKIAIVQ------------------------------- 148

Query: 181 VFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVP 240
                            D FVLCRIFQKSG+GPKNGEQYGAPFIEEEWE++E +  A+VP
Sbjct: 149 -----------------DAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWEENEEL--AVVP 189

Query: 241 GHDVVADELVVSDDAYFETNDLDQNIDVANQSENA-PRHLNFYHGESSNHVEHSRDLSPD 299
           G D  ADEL+       E +D  +N++    SE+A P   N+Y+GE+SN +E S +   D
Sbjct: 190 GDDQAADELLGVGGVCIEGDDFSENVEEGILSESAPPPPFNYYYGETSNSIEQSDNYIED 249

Query: 300 NQKPMIGVGATQHNSELMDA--------------RPVKDEYI-DSSNG--------VNAG 336
           +QKP +G+  T   SEL D               R VK EY+ +SSN         VNAG
Sbjct: 250 DQKPAVGICET---SELPDGQKFFVLPDECGLHDRLVKHEYLAESSNDAGANAADEVNAG 306

Query: 337 GVN--YFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNS 394
            ++  Y LNE +   +DN  FSD L LE N+LS+  E+D   FD++EEYL FFDA+ DN 
Sbjct: 307 DMDGRYVLNEAFYSTSDNLSFSDELLLEPNELSNPTESDPADFDVLEEYLTFFDADGDNV 366

Query: 395 EYLTFDASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIV 454
           + ++FD SEILGSG    DQ   T  V   T+  S + Q     H N  +S+S Q+P+  
Sbjct: 367 D-MSFDPSEILGSGSPIPDQ---TEAVGGATEHASASKQTADLRHDNGASSSSMQRPEDP 422

Query: 455 KSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIR 514
           KSESD+KYPFLK  S MLG++ A   FAS+F +KDAA+ LNS    SSSV VTAGM+ IR
Sbjct: 423 KSESDIKYPFLKHTSHMLGSIPA--PFASQFTSKDAAIHLNSAPQASSSVRVTAGMLVIR 480

Query: 515 NITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPS 549
           NI L+G  ++   GKN D+NI++ + + +  I  S
Sbjct: 481 NIALNGYEVNNMYGKNSDLNIIYLYGIVEGNIDSS 515

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465328|ref|XP_004150380.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus] gi|449513036|ref|XP_004164210.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 306/615 (49%), Positives = 376/615 (61%), Gaps = 85/615 (13%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MG + +STSLAPGFRFHPTDEE+VRYYL+RKV  +SLRF+PI VT+IYKSEPWDLP KS 
Sbjct: 1   MGSD-SSTSLAPGFRFHPTDEEIVRYYLRRKVSGKSLRFDPISVTEIYKSEPWDLPGKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LKTRD EWYFFS LDKKYGN SRTNRATE GYWKTTGKDRPV HN+R VGMKKTLVYH G
Sbjct: 60  LKTRDLEWYFFSPLDKKYGNSSRTNRATEHGYWKTTGKDRPVRHNSRVVGMKKTLVYHSG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFL 180
           RAP G R+NWVMHEYRLTD+DLEKAGV Q                               
Sbjct: 120 RAPRGARSNWVMHEYRLTDEDLEKAGVVQ------------------------------- 148

Query: 181 VFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVP 240
                            D +VLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDE +    +P
Sbjct: 149 -----------------DAYVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEEL---TLP 188

Query: 241 GHDVVADELVVSDDAY--FETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSP 298
           G +VVA+E +V  D Y  FE +D+ Q  D     E     L  Y  E+SNHVE    L  
Sbjct: 189 GEEVVANEGLVDVDDYMHFEVDDIAQYFDGELPGEYGQPPL-IYPQETSNHVELPNGLVE 247

Query: 299 DNQKPMIGVGATQHNSELMDARPVKDEY-------------------IDSSNGVNAGGVN 339
           ++ KP +  G T      ++   + ++Y                    +SS+  N   +N
Sbjct: 248 NDNKPEVCAGDTFELQPSLNFFQLPEQYGTGESSERDDRFAESSGNLAESSDNFNQEDIN 307

Query: 340 YFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTF 399
           Y L+EPY    D+   ++ L+LEANDLS+ VE+D    D++EEY  FFDA DDN + L F
Sbjct: 308 YLLDEPYPSVPDDLALNEELFLEANDLSNPVESDPSALDVLEEYFTFFDA-DDNLQ-LAF 365

Query: 400 DASEILGSGDNNSDQVPLTTEVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESD 459
           D S++  S +  S Q     +V+EV ++  MA +       ND ASTS+Q P  +++ SD
Sbjct: 366 DPSDLFDSEEPISSQTTSEEKVSEVAEKEFMAAKQSSVTFVND-ASTSKQDPKAIETSSD 424

Query: 460 VKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLS 519
            K PF K AS MLGN+ A PAFASE+P+KD A+RLNS A  SSSVHVTAGMI IRN+T +
Sbjct: 425 SKSPFFKGASYMLGNIPAPPAFASEYPSKDMAIRLNSAAQTSSSVHVTAGMIHIRNLTSN 484

Query: 520 GSGL-DWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFL 578
           G  + D   GKN D+N++ SF   Q+ +     S E  G I  G  G + F  L      
Sbjct: 485 GDLVNDPLYGKNADVNLILSFAQHQHQVESDHQS-EKNGTIV-GSRGFLFFFLL-----F 537

Query: 579 WIIILSVGFKIGACV 593
           W++ILSV FK+G+C+
Sbjct: 538 WVLILSVSFKVGSCI 552

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806417|ref|XP_002871092.1| hypothetical protein ARALYDRAFT_908325 [Arabidopsis lyrata subsp. lyrata] gi|297316929|gb|EFH47351.1| hypothetical protein ARALYDRAFT_908325 [Arabidopsis lyrata subsp. lyrata]

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 287/643 (44%), Positives = 367/643 (57%), Gaps = 122/643 (18%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++  +F+ I VTDIYKSEPWDLPDKS 
Sbjct: 1   MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFL 180
           RAP GERTNWVMHEYRL+D+DL+KAGV Q                               
Sbjct: 120 RAPRGERTNWVMHEYRLSDEDLKKAGVPQ------------------------------- 148

Query: 181 VFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVP 240
                            + +VLCRIFQKSG+GPKNGEQYGAPF+EEEWE+D       VP
Sbjct: 149 -----------------EAYVLCRIFQKSGTGPKNGEQYGAPFLEEEWEEDAMT---YVP 188

Query: 241 GHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVE------HSR 294
             D  ++ L V DD Y + +D+D+  +     +  P   N+ HGESSN+VE         
Sbjct: 189 DQDSFSEGLAVDDDVYVDIDDIDEKPENLVVYDAVPILPNYCHGESSNNVESGNYSDSGN 248

Query: 295 DLSPDN-------------------QKPMIGVGATQHNSELMDAR---PVKDEYI----D 328
            + P N                   QKP+I  G+ Q  S   + +    V+DE       
Sbjct: 249 YIQPGNYVVDSGGYFEQPIETFEEDQKPIIRDGSIQPCSLFPEEQIGCGVQDENAVNLES 308

Query: 329 SSNGVNAG---------GVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDM 379
           S+N V              NY  +EP++D  +N   +DGLYLE NDLS   + D   F+ 
Sbjct: 309 SNNNVFVADTCYSDIPIDTNYLPDEPFMDPNNNLPLNDGLYLETNDLSCAQQDD---FNF 365

Query: 380 VEEYLNFFDANDDNSEYLTFDASEILGSGD-----NNSDQVPLTTEVTEVTDQMSMAGQH 434
            E+YLNFFD      E  T D S+++G           DQ P   E+    ++    G+ 
Sbjct: 366 -EDYLNFFD-----DESFTLDDSQLMGPEAALPNLEGLDQKPTPEEL----EKEVAGGKE 415

Query: 435 QVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRL 494
            VE   +   S+S+Q  D+   +S  KYPFLK+ S MLG +    +FAS+F TKDAA+RL
Sbjct: 416 AVEEKESGEGSSSKQDADVKDFDSASKYPFLKKTSHMLGAIPTPSSFASQFQTKDAAMRL 475

Query: 495 NSLAHPSSSVHVTAGMIRIRNITLSG-SGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSF 553
           ++ A  S SVHVTAGMIRI N+TL+  SG+ WS  KNG++N+V SF + Q          
Sbjct: 476 HA-AQSSGSVHVTAGMIRISNMTLAADSGMGWSYDKNGNLNVVLSFGVVQR--------- 525

Query: 554 EPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK 596
           + A +    KT +   R++ + + LW+++LSV FKI   V A+
Sbjct: 526 DDALSASGSKTETTATRAMLVFMCLWVLLLSVSFKIVTMVFAR 568

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	596
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.248	0.261	0.798	1.2e-120
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.248	0.269	0.765	1e-84
TAIR|locus:2037925	528	NAC13 "NAC domain protein 13"	0.248	0.280	0.593	1.6e-66
TAIR|locus:2075835	451	NAC052 "NAC domain containing	0.243	0.321	0.668	1.8e-60
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.238	0.225	0.629	3.5e-58
TAIR|locus:2009096	557	NAC017 "NAC domain containing	0.221	0.236	0.613	1.9e-57
TAIR|locus:2184742	489	NAC082 "NAC domain containing	0.238	0.290	0.612	1e-56
TAIR|locus:2097720	479	NAC045 "NAC domain containing	0.231	0.288	0.637	1.3e-56
TAIR|locus:2026114	576	NAC016 "NAC domain containing	0.221	0.229	0.548	1.4e-53
TAIR|locus:2164391	356	NAC103 "NAC domain containing	0.238	0.398	0.584	9.9e-52

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 655 (235.6 bits), Expect = 1.2e-120, Sum P(3) = 1.2e-120
 Identities = 119/149 (79%), Positives = 132/149 (88%)

Query:     1 MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
             MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++  +F+ I VTDIYKSEPWDLPDKS 
Sbjct:     1 MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSK 59

Query:    61 LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
             LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH G
Sbjct:    60 LKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKG 119

Query:   121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQ 149
             RAP GERTNWVMHEYRL+D+DL+KAGV Q
Sbjct:   120 RAPRGERTNWVMHEYRLSDEDLKKAGVPQ 148

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
 Identities = 114/149 (76%), Positives = 128/149 (85%)

Query:     1 MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
             MGR  + TSLAPGFRFHPTDEELVRYYLKRK+C++  +F+ I VTD+YKSEPWDLPDKS 
Sbjct:     1 MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKICNKPFKFDAISVTDVYKSEPWDLPDKSR 59

Query:    61 LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
             LK+RD EWYFFSMLDKKY NGS+TNRATE GYWKTTGKDR + + ++ VGMKKTLVYH G
Sbjct:    60 LKSRDLEWYFFSMLDKKYRNGSKTNRATEMGYWKTTGKDREILNGSKVVGMKKTLVYHKG 119

Query:   121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQ 149
             RAP GERTNWVMHEYRL D DL+K GV Q
Sbjct:   120 RAPRGERTNWVMHEYRLVDQDLDKTGVHQ 148

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2037925 NAC13 "NAC domain protein 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 487 (176.5 bits), Expect = 1.6e-66, Sum P(4) = 1.6e-66
 Identities = 89/150 (59%), Positives = 116/150 (77%)

Query:    10 LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
             LAPGFRFHPTDEELV YYLKRK+  + LR   I  TD+YK +P +LP+K+  KTRD++W+
Sbjct:    10 LAPGFRFHPTDEELVVYYLKRKIRRKKLRVEAIGETDVYKFDPEELPEKALYKTRDRQWF 69

Query:    70 FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTN 129
             FFS+ D+K+G  SR++RATE+GYWK TGKDR +H ++R VG KKTLV+H GRAP+GERTN
Sbjct:    70 FFSLRDRKHG--SRSSRATERGYWKATGKDRVIHCDSRPVGEKKTLVFHRGRAPNGERTN 127

Query:   130 WVMHEYRLTDDDLEKAGVAQVRSWRTLFGI 159
             WVMHEY L  ++L++ G   V+    L+ I
Sbjct:   128 WVMHEYTLHKEELKRCGGEDVKDAYVLYKI 157

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010114 "response to red light" evidence=IEP

GO:0010224 "response to UV-B" evidence=IEP

GO:0005737 "cytoplasm" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2075835 NAC052 "NAC domain containing protein 52" [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
 Identities = 97/145 (66%), Positives = 111/145 (76%)

Query:     2 GREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSL 61
             G    +TSLAPGFRFHPTDEELV YYLKRKV  + +RF+ I   DIYK EPWDL   S L
Sbjct:    19 GTASVATSLAPGFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRL 78

Query:    62 KTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGR 121
             KTRD+EWYF+S LDKKYGNG+R NRAT +GYWK TGKDR +  +   +GMKKTLV+H GR
Sbjct:    79 KTRDQEWYFYSALDKKYGNGARMNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGR 138

Query:   122 APHGERTNWVMHEYRLTDDDLEKAG 146
             AP G RTNWVMHEYRL + + EK G
Sbjct:   139 APDGLRTNWVMHEYRLVEYETEKNG 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005730 "nucleolus" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 491 (177.9 bits), Expect = 3.5e-58, Sum P(4) = 3.5e-58
 Identities = 90/143 (62%), Positives = 109/143 (76%)

Query:     6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
             A  S+ PGFRFHPTDEELV YYLKRK+  R++    I   D+YK EPWDLP KS L ++D
Sbjct:     2 APVSMPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKD 61

Query:    66 KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
              EW+FFS  D+KY NGSRTNRAT+ GYWK TGKDR V  ++R VG KKTLVY+ GRAPHG
Sbjct:    62 LEWFFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRAPHG 121

Query:   126 ERTNWVMHEYRLTDDDLE-KAGV 147
              RT+WVMHEYRL + + + K+G+
Sbjct:   122 SRTDWVMHEYRLEEQECDSKSGI 144

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2009096 NAC017 "NAC domain containing protein 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 478 (173.3 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
 Identities = 81/132 (61%), Positives = 106/132 (80%)

Query:    11 APGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYF 70
             APGFRFHPTDEELV YYLKRK+C + LR N I V D+YK +P +LP +S LKT D++W++
Sbjct:    17 APGFRFHPTDEELVMYYLKRKICRKRLRVNVIGVVDVYKMDPEELPGQSMLKTGDRQWFY 76

Query:    71 FSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNW 130
             F+   +KY N +R+NR TE GYWK TGKDR + +N+R+VG+KKTLV++ GRAP GERT+W
Sbjct:    77 FTPRSRKYPNAARSNRGTENGYWKATGKDRVIEYNSRSVGLKKTLVFYRGRAPSGERTDW 136

Query:   131 VMHEYRLTDDDL 142
             VMHEY + +D+L
Sbjct:   137 VMHEYTMDEDEL 148

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

GO:0016197 "endosomal transport" evidence=RCA

TAIR|locus:2184742 NAC082 "NAC domain containing protein 82" [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 1.0e-56, Sum P(3) = 1.0e-56
 Identities = 87/142 (61%), Positives = 103/142 (72%)

Query:     8 TSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKE 67
             T LAPGFRFHPTD ELVRYYLKRK+  + L  + I   DIYK EP DLPD S +++ D +
Sbjct:     4 TQLAPGFRFHPTDVELVRYYLKRKILGKKLLVDAIAEVDIYKFEPPDLPDMSFIRSGDLK 63

Query:    68 WYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGER 127
             W+FF   +KKY +G R NRATE GYWKTTGK+RPV  N+  VG  KTLVYH G++P GER
Sbjct:    64 WHFFCPREKKYASGVRANRATECGYWKTTGKERPVLCNSEVVGKIKTLVYHFGKSPRGER 123

Query:   128 TNWVMHEYRLTDDDLEKAGVAQ 149
             T+WVMHEYRL D  L +  V Q
Sbjct:   124 TDWVMHEYRLDDKVLTQMNVPQ 145

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2097720 NAC045 "NAC domain containing protein 45" [Arabidopsis thaliana (taxid:3702)]

 Score = 485 (175.8 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
 Identities = 88/138 (63%), Positives = 101/138 (73%)

Query:     6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
             A  SL PGFRFHPTDEEL+ YYLKRK+    +    I   D+YK EPWDLP KS L ++D
Sbjct:     2 APVSLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSKD 61

Query:    66 KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
             +EWYFFS  D+KY NGSRTNRAT+ GYWK TGKDR V    R +G KKTLVY+ GRAPHG
Sbjct:    62 QEWYFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGRAPHG 121

Query:   126 ERTNWVMHEYRLTDDDLE 143
              RT WVMHEYRL + + E
Sbjct:   122 IRTGWVMHEYRLDETECE 139

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2026114 NAC016 "NAC domain containing protein 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 432 (157.1 bits), Expect = 1.4e-53, Sum P(3) = 1.4e-53
 Identities = 79/144 (54%), Positives = 106/144 (73%)

Query:    11 APGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDK------------ 58
             APGFRFHPTDEELV YYLKRK+C + LR N I V D+YK +P +LP              
Sbjct:    17 APGFRFHPTDEELVVYYLKRKICCKKLRVNAIGVVDVYKVDPSELPGNFQHLLIDFDSCL 76

Query:    59 SSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYH 118
             S LKT D++W+FF+  ++KY N +R++R T  GYWK TGKDR + +N+R+VG+KKTLV++
Sbjct:    77 SMLKTGDRQWFFFTPRNRKYPNAARSSRGTATGYWKATGKDRVIEYNSRSVGLKKTLVFY 136

Query:   119 MGRAPHGERTNWVMHEYRLTDDDL 142
              GRAP+GERT+WVMHEY + +++L
Sbjct:   137 RGRAPNGERTDWVMHEYTMDEEEL 160

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2164391 NAC103 "NAC domain containing protein 103" [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
 Identities = 83/142 (58%), Positives = 100/142 (70%)

Query:     8 TSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKE 67
             T+LAPGFRFHPTD ELVRYYLKRKV  +  + + I   DIYK EP DLPDKS L T D +
Sbjct:     4 TNLAPGFRFHPTDVELVRYYLKRKVMGKKFQVDAIAEVDIYKFEPPDLPDKSCLGTGDLK 63

Query:    68 WYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGER 127
             WYFF   +KKY  G + NR+TE GYWKTTG+DR V +N    G  +TL+YH G+ P G+R
Sbjct:    64 WYFFCPREKKYPKGGKANRSTECGYWKTTGRDRDVSYNDEVTGKIRTLIYHYGKIPRGDR 123

Query:   128 TNWVMHEYRLTDDDLEKAGVAQ 149
             T+WV+HEYRL D  L +  V Q
Sbjct:   124 TDWVIHEYRLEDKVLAQKNVPQ 145

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84K00	NAC78_ARATH	No assigned EC number	0.4447	0.8724	0.9171	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	596
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	7e-77

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  239 bits (612), Expect = 7e-77
 Identities = 87/131 (66%), Positives = 96/131 (73%), Gaps = 3/131 (2%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLR-FNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           L PGFRFHPTDEELV YYLKRKV  + L   + I   DIYK EPWDLPD    K  D+EW
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGDREW 59

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHH-NTRTVGMKKTLVYHMGRAPHGER 127
           YFFS  D+KY NGSRTNRAT  GYWK TGKD+PV       VGMKKTLV++ GRAP GE+
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEK 119

Query: 128 TNWVMHEYRLT 138
           T+WVMHEYRL 
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	596
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=1.1e-40  Score=300.63  Aligned_cols=127  Identities=53%  Similarity=1.038  Sum_probs=97.2

Q ss_pred             CCCCceeCCChHHHHHHHHHHhhcCCCCCC-CCeeeccCCCCCCCCCCCcCCcCCCCcceEeeeccccccCCCCCccccc
Q 007598           10 LAPGFRFHPTDEELVRYYLKRKVCHRSLRF-NPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRAT   88 (596)
Q Consensus        10 LPPGFRF~PTDEELV~~YLkrKI~G~plp~-~~I~EvDVY~~ePWdLP~~s~~k~~d~eWYFFSpr~rKy~nG~R~nRat   88 (596)
                      |||||||+|||+|||.+||++|+.|.+++. ++|+++|||++|||+||+.  ..+++.+||||+++++++.++.|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~--~~~~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAK--FKGGDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHH--SSS-SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhh--ccCCCceEEEEEecccccCCcccccccc
Confidence            899999999999999999999999999888 6899999999999999942  2335679999999999999999999999


Q ss_pred             ccceeEecCCcceeec-CCeEEEEEEEEEeeeCCCCCCCCcCeEEEEEEeC
Q 007598           89 EKGYWKTTGKDRPVHH-NTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLT  138 (596)
Q Consensus        89 ggGyWKatGkdK~I~~-~G~vVG~KKtLvFy~GrapkG~RTdWVMhEYrL~  138 (596)
                      ++|+||.+|+.++|.. ++.+||+||+|+||.++.+++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999999988 8999999999999999888899999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	596
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		1e-39
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-36
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		5e-35

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  161 bits (407), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 72/132 (54%), Positives = 92/132 (69%), Gaps = 2/132 (1%)
Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           A  +L PGFRFHPTD+ELV +YL RK   + L    I   D+YK +PWDLP+++    R 
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAR- 69
Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
            EWYFF+  D+KY NGSR NRA   GYWK TG D+PV    RT+G+KK LV++ G+AP G
Sbjct: 70  -EWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG 128
Query: 126 ERTNWVMHEYRL 137
            +T+W+MHEYRL
Sbjct: 129 VKTDWIMHEYRL 140

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  150 bits (379), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/145 (48%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP+K+     +KEW
Sbjct: 19  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEW 76
Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV+++G+AP G +T
Sbjct: 77  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 136
Query: 129 NWVMHEYRLTDDDLEKAGVAQVRSW 153
           NW+MHEYRL +    + G  ++  W
Sbjct: 137 NWIMHEYRLIEPS-RRNGSTKLDDW 160

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 70/145 (48%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP+K+     +KEW
Sbjct: 16  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEW 73
Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV+++G+AP G +T
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133
Query: 129 NWVMHEYRLTDDDLEKAGVAQVRSW 153
           NW+MHEYRL +    + G  ++  W
Sbjct: 134 NWIMHEYRLIEPS-RRNGSTKLDDW 157

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	596
1ut7_A	171	No apical meristem protein; transcription regulati	2e-89
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-89

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  273 bits (699), Expect = 2e-89
 Identities = 79/218 (36%), Positives = 102/218 (46%), Gaps = 54/218 (24%)

Query: 1   MGRE----FASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLP 56
           MG +        SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP
Sbjct: 4   MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP 63

Query: 57  DKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLV 116
           +K+     +KEWYFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV
Sbjct: 64  NKALF--GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALV 121

Query: 117 YHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSL 176
           +++G+AP G +TNW+MHEYRL +                                     
Sbjct: 122 FYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKL--------------------------- 154

Query: 177 FFFLVFLQLVEIDWLLVVLGKDTFVLCRIFQKSGSGPK 214
                                D +VLCRI++K  S  K
Sbjct: 155 ---------------------DDWVLCRIYKKQSSAQK 171

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  273 bits (699), Expect = 2e-89
 Identities = 81/209 (38%), Positives = 106/209 (50%), Gaps = 45/209 (21%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           A  +L PGFRFHPTD+ELV +YL RK   + L    I   D+YK +PWDLP+++      
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERA--LFGA 68

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
           +EWYFF+  D+KY NGSR NRA   GYWK TG D+PV    RT+G+KK LV++ G+AP G
Sbjct: 69  REWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG 128

Query: 126 ERTNWVMHEYRLTDDDLEKAGVAQVRSWRTLFGICVFICIVLVFDQLSLSLFFFLVFLQL 185
            +T+W+MHEYRL D     AG  +                                    
Sbjct: 129 VKTDWIMHEYRLADAGRAAAGAKKGSLR-------------------------------- 156

Query: 186 VEIDWLLVVLGKDTFVLCRIFQKSGSGPK 214
                       D +VLCR++ K     K
Sbjct: 157 -----------LDDWVLCRLYNKKNEWEK 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	596
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=7.6e-53  Score=401.29  Aligned_cols=135  Identities=53%  Similarity=1.017  Sum_probs=123.0

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHhhcCCCCCCCCeeeccCCCCCCCCCCCcCCcCCCCcceEeeeccccccCCCCCcc
Q 007598            6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTN   85 (596)
Q Consensus         6 a~~~LPPGFRF~PTDEELV~~YLkrKI~G~plp~~~I~EvDVY~~ePWdLP~~s~~k~~d~eWYFFSpr~rKy~nG~R~n   85 (596)
                      +...|||||||||||||||.|||++|+.|.+++.++|+++|||++|||+||+.+..  ++.+||||+++++||++|.|.+
T Consensus        11 ~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~--g~~ewYFFs~r~~ky~~g~R~n   88 (174)
T 3ulx_A           11 AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALF--GAREWYFFTPRDRKYPNGSRPN   88 (174)
T ss_dssp             STTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSS--CSSEEEEEEECCC-----CCSC
T ss_pred             cccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhcc--CCceEEEEeccccccCCCCCce
Confidence            56899999999999999999999999999999999999999999999999998753  4679999999999999999999


Q ss_pred             cccccceeEecCCcceeecCCeEEEEEEEEEeeeCCCCCCCCcCeEEEEEEeCCCch
Q 007598           86 RATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDL  142 (596)
Q Consensus        86 RatggGyWKatGkdK~I~~~G~vVG~KKtLvFy~GrapkG~RTdWVMhEYrL~~~~l  142 (596)
                      |+|++||||+||++++|..+|.+||+||+|+||.|++|++.||+|+||||+|.+...
T Consensus        89 R~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~  145 (174)
T 3ulx_A           89 RAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGR  145 (174)
T ss_dssp             EEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-
T ss_pred             eecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCC
Confidence            999999999999999999889999999999999999999999999999999998753

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.1e-52  Score=399.02  Aligned_cols=134  Identities=51%  Similarity=0.952  Sum_probs=120.7

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHhhcCCCCCCCCeeeccCCCCCCCCCCCcCCcCCCCcceEeeeccccccCCCCCcc
Q 007598            6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTN   85 (596)
Q Consensus         6 a~~~LPPGFRF~PTDEELV~~YLkrKI~G~plp~~~I~EvDVY~~ePWdLP~~s~~k~~d~eWYFFSpr~rKy~nG~R~n   85 (596)
                      +...|||||||||||||||.|||++|+.|.+++.++|+++|||++|||+||+.+.  .++.+||||+++++||++|.|++
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~--~g~~ewyFFs~r~~k~~~g~R~~   90 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRPN   90 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------CC
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhh--cCCccEEEEeccccccCCCCccc
Confidence            4688999999999999999999999999999999999999999999999999864  34789999999999999999999


Q ss_pred             cccccceeEecCCcceeecCCeEEEEEEEEEeeeCCCCCCCCcCeEEEEEEeCCCc
Q 007598           86 RATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDD  141 (596)
Q Consensus        86 RatggGyWKatGkdK~I~~~G~vVG~KKtLvFy~GrapkG~RTdWVMhEYrL~~~~  141 (596)
                      |+|++||||+||++++|..++.+||+||+|+||.|++|++.||+|+||||+|....
T Consensus        91 R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~  146 (171)
T 1ut7_A           91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPS  146 (171)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC
T ss_pred             ccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCc
Confidence            99999999999999999998999999999999999999999999999999998775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	596
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-61

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  199 bits (506), Expect = 2e-61
 Identities = 70/153 (45%), Positives = 90/153 (58%), Gaps = 6/153 (3%)

Query: 1   MGRE----FASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLP 56
           MG +        SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP
Sbjct: 4   MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP 63

Query: 57  DKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLV 116
           +K+     +KEWYFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV
Sbjct: 64  NKA--LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALV 121

Query: 117 YHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQ 149
           +++G+AP G +TNW+MHEYRL +          
Sbjct: 122 FYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKL 154

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	596
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.8e-50  Score=375.45  Aligned_cols=135  Identities=50%  Similarity=0.939  Sum_probs=120.4

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHhhcCCCCCCCCeeeccCCCCCCCCCCCcCCcCCCCcceEeeeccccccCCCCCcc
Q 007598            6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTN   85 (596)
Q Consensus         6 a~~~LPPGFRF~PTDEELV~~YLkrKI~G~plp~~~I~EvDVY~~ePWdLP~~s~~k~~d~eWYFFSpr~rKy~nG~R~n   85 (596)
                      ++..|||||||||||||||.|||++|+.|.+++.++|+++|||++|||+||+.+.  .++.+||||+++++|+++|.|.+
T Consensus        13 ~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~--~~~~~wyFft~~~~k~~~g~r~~   90 (166)
T d1ut7a_          13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRPN   90 (166)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------CC
T ss_pred             ccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhc--cCcceEEEEeeeccccCCCCccc
Confidence            5789999999999999999999999999999999999999999999999998754  34778999999999999999999


Q ss_pred             cccccceeEecCCcceeecCCeEEEEEEEEEeeeCCCCCCCCcCeEEEEEEeCCCch
Q 007598           86 RATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDL  142 (596)
Q Consensus        86 RatggGyWKatGkdK~I~~~G~vVG~KKtLvFy~GrapkG~RTdWVMhEYrL~~~~l  142 (596)
                      |++++|+||++|+++.|..+|.+||+||+|+||+++++++.||+|+||||+|.+...
T Consensus        91 R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~  147 (166)
T d1ut7a_          91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR  147 (166)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-
T ss_pred             cccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCccc
Confidence            999999999999999999999999999999999999999999999999999988753