Citrus Sinensis ID: 007627
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WSF1 | 596 | Aldehyde dehydrogenase 22 | yes | no | 0.998 | 0.996 | 0.841 | 0.0 | |
| P38694 | 644 | Putative aldehyde dehydro | yes | no | 0.867 | 0.801 | 0.397 | 1e-109 | |
| Q9P7K9 | 522 | Putative aldehyde dehydro | yes | no | 0.840 | 0.957 | 0.361 | 1e-99 | |
| P94428 | 462 | Succinate-semialdehyde de | yes | no | 0.754 | 0.971 | 0.298 | 3e-59 | |
| P17202 | 497 | Betaine aldehyde dehydrog | N/A | no | 0.789 | 0.945 | 0.308 | 9e-59 | |
| Q9S795 | 501 | Betaine aldehyde dehydrog | no | no | 0.783 | 0.930 | 0.327 | 1e-57 | |
| Q0B712 | 489 | Betaine aldehyde dehydrog | no | no | 0.747 | 0.910 | 0.318 | 1e-56 | |
| B1Z033 | 489 | Betaine aldehyde dehydrog | no | no | 0.747 | 0.910 | 0.318 | 2e-56 | |
| P42757 | 502 | Betaine aldehyde dehydrog | N/A | no | 0.789 | 0.936 | 0.305 | 2e-56 | |
| Q9STS1 | 503 | Betaine aldehyde dehydrog | no | no | 0.764 | 0.904 | 0.320 | 3e-56 |
| >sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/594 (84%), Positives = 548/594 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKI
Sbjct: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKI 540
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 594
PKPIQYPVAEN FEFQE+LVE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 541 PKPIQYPVAENAFEFQEALVETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 594
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|P38694|MSC7_YEAST Putative aldehyde dehydrogenase-like protein YHR039C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSC7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/543 (39%), Positives = 317/543 (58%), Gaps = 27/543 (4%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
P+ +QC+ PAT +YLG FP+ + A++DE V++A KAQ W S F +R + L L
Sbjct: 105 NPEEPNFIQCHCPATGQYLGSFPSKTEADIDEMVSKAGKAQSTWGNSDFSRRLRVLASLH 164
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
YI+ +Q+LI ++ RD+GKTM+DAS+GEI+ T EKI W + G++ L+P R +
Sbjct: 165 DYILNNQDLIARVACRDSGKTMLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFF 224
Query: 179 ---HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+K A++ + PLGV+ +IVSWNYPFHN+ P++AA+F+GN IV+K SE WS F+
Sbjct: 225 MKWYKGAEIRYEPLGVISSIVSWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFV 284
Query: 236 RIIQAALAAVGAPENLVDVI-----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288
+I+ L A +LV + T ++ S I F+GS V I++ A
Sbjct: 285 ELIRKCLEACDEDPDLVQLCYCLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCA 344
Query: 289 SKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 347
+K+LTPV +ELGGKDAFIV D ++ ++ I +R QSSGQNC G ER V ++ Y
Sbjct: 345 AKSLTPVVVELGGKDAFIVLDSAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY-- 402
Query: 348 FVSQVAKIVKS-VSAGPPLAG-------KYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399
+ KI+ ++A P G DMGA+ ++L+ LV DA+ KGA +L
Sbjct: 403 --DDLVKILNDRMTANPLRQGSDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQ 460
Query: 400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
GS + YF PT++V+V MK+ Q E FGPI+ +MK + V+LAN + +
Sbjct: 461 GGSRFKHPKYPQGHYFQPTLLVDVTPEMKIAQNEVFGPILVMMKAKNTDHCVQLANSAPF 520
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
GLG +VF +A +Q G AINDFA+ Y+CQ LPFGG+ SG+G+F G EGL
Sbjct: 521 GLGGSVFGADIKECNYVANSLQTGNVAINDFATFYVCQ-LPFGGINGSGYGKFGGEEGLL 579
Query: 520 ACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN--GFEFQESLVEALYGLNIWDRLRALVN 577
C KSV D P++ T+IPKP+ YP+ N + F +S + Y + W R+++L +
Sbjct: 580 GLCNAKSVCFDT-LPFVSTQIPKPLDYPIRNNAKAWNFVKSFIVGAYTNSTWQRIKSLFS 638
Query: 578 VLK 580
+ K
Sbjct: 639 LAK 641
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q9P7K9|YOSF_SCHPO Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21C3.15c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 183/506 (36%), Positives = 294/506 (58%), Gaps = 6/506 (1%)
Query: 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE 123
+ + CY P LG +++++D+ + A +AQK W +SF +RR FL+ L + II
Sbjct: 3 STLTCYCPGDGSLLGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIR 62
Query: 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK 183
+Q+ EI+ +DTGKT+VDA+ GEI+ T EKI W L+ GE+ L+P R + +K
Sbjct: 63 NQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGY 122
Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
V++ PLGV+ A+VSWNYP HN P+++A+F+GN IV+K SE +WS Y ++++ L
Sbjct: 123 VKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQ 182
Query: 244 AVGAPENLVDVITGFAETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
++G LV IT + + L S + I F+GS + +++ +A+K LTP+ LELGG
Sbjct: 183 SMGHSPELVQCITCLPDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGG 242
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
KD I+ DD + + I +R QS+GQNC G ER +Y ++++ + ++
Sbjct: 243 KDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRL 302
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
G DMGA+ + L++L+ DA+ KGA ++ G + YF PT++V
Sbjct: 303 GMYTQNDVDMGAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQHPKYPKGNYFLPTLLV 362
Query: 422 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 481
+ + MK+ QEE F PI + + + E +++AN + +GLG +VF + + ++
Sbjct: 363 DATNEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLE 422
Query: 482 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIP 541
G+ A+NDF + Y+ Q +PFGG K SG+GRFAG EGLR C K++ DR + I T IP
Sbjct: 423 TGMVAVNDFGAFYLLQ-MPFGGCKKSGYGRFAGYEGLRGICNSKAIAYDR-FSAIHTGIP 480
Query: 542 KPIQYPV--AENGFEFQESLVEALYG 565
+ YP+ ++ ++F L+ +YG
Sbjct: 481 PAVDYPIPDSQKAWQFVRGLMGTVYG 506
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|P94428|GABD_BACSU Succinate-semialdehyde dehydrogenase [NADP(+)] OS=Bacillus subtilis (strain 168) GN=gabD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 250/479 (52%), Gaps = 30/479 (6%)
Query: 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
++ Y PAT + + P S EV+E + ++ +A K W+K+S +R L+ + I+EH
Sbjct: 4 QLTVYNPATGEEIKTIPQQSATEVEEAIERSHQAFKTWSKTSANERTSLLKKWYELIVEH 63
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
+E + ++ +++ GK +A +GE++ I W E ++ R+ K+ V
Sbjct: 64 KEELADLITKENGKPYQEA-VGEVLYGAGYIEWFAEEAKRVYG---RTVPAPTTGKRIVV 119
Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
P+G V AI WN+P I A+ +G +IK + + S R+ A
Sbjct: 120 TRQPVGPVAAITPWNFPNAMITRKAAPALAAGCTFIIKPAPDTPLSAYELARLAYEA--- 176
Query: 245 VGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
G P++++ V+ G E G SS + KI F GS VG+++M+N++ T+ V++ELGG
Sbjct: 177 -GIPKDVLQVVIGDGEEIGNVFTSSPKIRKITFTGSTPVGKILMKNSADTVKHVSMELGG 235
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
IV +D D+ + A+ + +++GQ C A R VH I F +++++ V +
Sbjct: 236 HAPLIVDEDADIDLAVEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLKV 295
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVI 420
G L ++G + EK+ + ++DA++KGA+++A G++ + YF PTV+
Sbjct: 296 GNGLEEGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGC--YFVNPTVL 353
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+V+ +M +M EE FGP+ PI+ F+ +E ++LAND+ YGL F+ + R I+ +
Sbjct: 354 TDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFTENYRRGIYISENL 413
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTK 539
+ G+ ND + + PFGG+K+SG GR G EG+ PY++TK
Sbjct: 414 EYGIIGWNDGGPSAV--QAPFGGMKESGIGREGGSEGIE--------------PYLETK 456
|
Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate. Bacillus subtilis (strain 168) (taxid: 224308) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 9 |
| >sp|P17202|BADH_SPIOL Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (581), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 243/486 (50%), Gaps = 16/486 (3%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
++I R P + ++ P+T + +G PA + +V+ V AR+A + W+ +S
Sbjct: 10 LFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGA 69
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
R +LR + I E ++ ++ + D+GK +A L +I + + E
Sbjct: 70 HRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDGK 128
Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
+ M K+ V PLGVVG I WNYP + A+ +G V+K SE AS
Sbjct: 129 QKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285
+ C F + VG P +++++TG + G LVS VDKI F GS G +M
Sbjct: 189 VT-CLEFGEV---CNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM 244
Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
+A++ + PVTLELGGK +V +DVD+ V + + ++GQ C+ R VH I
Sbjct: 245 ASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIA 304
Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-G 404
A FV ++ K K++ P +G + +K+ ++ A +GA IL GS
Sbjct: 305 AEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPE 364
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
HL +G Y PT++ +++ +M++ +EE FGP++ + F++++E + LAND+ YGL A
Sbjct: 365 HLKKG---YYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAA 421
Query: 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524
VFS R I ++ G +N S P+GG+K SGFGR G G++ +
Sbjct: 422 VFSNDLERCERITKALEVGAVWVN--CSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNI 479
Query: 525 KSVVED 530
K V +D
Sbjct: 480 KQVTQD 485
|
Spinacia oleracea (taxid: 3562) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q9S795|BADH1_ARATH Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 247/489 (50%), Gaps = 23/489 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKS 105
++I R P + ++ PAT + +G PA + +VD V AR+A K WAK+
Sbjct: 10 LFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAKA 69
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEK 164
R ++LR + + E + + ++ + D GK + +A + + C + L+EG
Sbjct: 70 PGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAEG-- 127
Query: 165 WLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
L + ++ M K+ V PLGVVG I WNYP + ++ +G ++K
Sbjct: 128 -LDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKP 186
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGV 280
SE AS + C I VG P +++V+TGF +E G L S VDKI F GS
Sbjct: 187 SELASVT-CLELADI---CREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFAT 242
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G +M A++ + PV++ELGGK IV DDVD+ A+ A+ ++GQ C+ R V
Sbjct: 243 GSKVMTAAAQLVKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLV 302
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
H I + F+ ++ K K++ P+ +G + EK+ ++ A +GA IL
Sbjct: 303 HESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHG 362
Query: 401 GSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
GS HL +G + PT+I +V +M++ +EE FGP++ + F +++E ++LANDS Y
Sbjct: 363 GSRPEHLEKGF---FIEPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHY 419
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
GLG AV S R I+ + G+ IN S P+GGVK SGFGR G GL
Sbjct: 420 GLGAAVISNDTERCDRISEAFEAGIVWIN--CSQPCFTQAPWGGVKRSGFGRELGEWGLD 477
Query: 520 ACCLVKSVV 528
VK V
Sbjct: 478 NYLSVKQVT 486
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q0B712|BETB_BURCM Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 229/468 (48%), Gaps = 23/468 (4%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
++PAT + L S A+VD VA AR+ Q+ WA + QR + LR + + E +
Sbjct: 26 TFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDE 85
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVE 185
+ I +RDTGK + + +I+T + I + L+ + L+ R+ S ++ + +
Sbjct: 86 LAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAE--SFVYTRRE-- 141
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
PLGV I +WNYP A+ +GN +V K SE + I A
Sbjct: 142 --PLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEA---- 195
Query: 246 GAPENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 302
G P + +V+ G G L D K+ F G G+ +M A + +L VT+ELGGK
Sbjct: 196 GVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGK 255
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
IV +D D+ A IAV A SSGQ C R +VHR + F +V + VK + G
Sbjct: 256 SPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVG 315
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF---GHLSEGAVDQYFPPTV 419
P + G L +K+ ++ +GA++LA G+ GH + G QY PTV
Sbjct: 316 KPTDAATNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFASG---QYVAPTV 372
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ MK+++EE FGP+M I+ F +++EV+ AND+ YGL V + + RA +
Sbjct: 373 FGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHR 432
Query: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
++ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 433 LEAGICWINTWGES--PAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
|
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (taxid: 339670) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|B1Z033|BETB_BURA4 Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 228/468 (48%), Gaps = 23/468 (4%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
++PAT + L S A+VD VA AR+ Q+ WA + QR + LR + + E +
Sbjct: 26 TFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDE 85
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVE 185
+ I +RDTGK + + +I+T + I + L+ + L+ R+ S ++ + +
Sbjct: 86 LAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAE--SFVYTRRE-- 141
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
PLGV I +WNYP A+ +GN +V K SE + I A
Sbjct: 142 --PLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEA---- 195
Query: 246 GAPENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 302
G P + +V+ G G L D K+ F G G+ +M A + +L VT+ELGGK
Sbjct: 196 GVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGK 255
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
IV +D D+ A IAV A SSGQ C R +VHR + F +V + VK + G
Sbjct: 256 SPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVG 315
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF---GHLSEGAVDQYFPPTV 419
P + G L +K+ ++ +GA++LA G+ GH G QY PTV
Sbjct: 316 KPTDADTNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFGSG---QYVAPTV 372
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ MK+++EE FGP+M I+ F +++EV+ AND+ YGL V + + RA +
Sbjct: 373 FGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHR 432
Query: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
++ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 433 LEAGICWINTWGES--PAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
|
Burkholderia ambifaria (strain MC40-6) (taxid: 398577) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|P42757|BADH_ATRHO Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 242/491 (49%), Gaps = 21/491 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-----WAKS 105
++I R P + ++ P+T + +G PA + +V+ V ARKA K WA +
Sbjct: 10 LFIDGEWREPLLKNRIPIINPSTEEIIGDIPAATAEDVEVAVVAARKAFKRNKGRDWA-A 68
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG--EIMTTCEKITWLLSEGE 163
+ R ++LR + I E ++ ++ + D+GK +A L ++ T E + + E
Sbjct: 69 LWSHRAKYLRAIAAKITEKKDHFVKLETLDSGKPRDEAVLDIDDVATCFEYFEYFAGQAE 128
Query: 164 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
+ M K+ V P+GVVG I WNYP + A+ +G V+K
Sbjct: 129 ALDAKQKAPVTLPMERFKSHVLRQPIGVVGLISPWNYPLLMDTWKIAPALAAGCTTVLKP 188
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280
SE AS + C F + VG P +++++TG + G +VS +DK+ F GS
Sbjct: 189 SELASVT-CLEFGEV---CNEVGLPPGVLNILTGLGPDAGAPIVSHPDIDKVAFTGSSAT 244
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G IM +A++ + PVTLELGGK I+ +D+D+ + + ++GQ C+ R V
Sbjct: 245 GSKIMASAAQLVKPVTLELGGKSPVIMFEDIDIETAVEWTLFGVFWTNGQICSATSRLLV 304
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
H I A FV ++ K K++ P +G + +K+ ++ A +GA IL
Sbjct: 305 HESIAAEFVDRMVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCG 364
Query: 401 GSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
GS HL +G Y PT+I ++ +M++ +EE FGP++ + F T++E ++LAND+ Y
Sbjct: 365 GSRPEHLKKG---YYIEPTIITDITTSMQIWKEEVFGPVICVKTFKTEDEAIELANDTEY 421
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
GL AVFS R + ++ G +N S P+GGVK SGFGR G G+
Sbjct: 422 GLAGAVFSKDLERCERVTKALEVGAVWVN--CSQPCFVHAPWGGVKRSGFGRELGEWGIE 479
Query: 520 ACCLVKSVVED 530
+K V D
Sbjct: 480 NYLNIKQVTSD 490
|
Atriplex hortensis (taxid: 34272) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q9STS1|BADH2_ARATH Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 243/481 (50%), Gaps = 26/481 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFLRILLKYIIEHQ 125
PAT +GY PA + +V+ V ARKA K WA+++ R ++LR + +IE +
Sbjct: 30 PATEDIIGYIPAATSEDVELAVEAARKAFTRNNGKDWARATGAVRAKYLRAIAAKVIERK 89
Query: 126 ELICEISSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAK 183
+ + + D GK + +A+ + + C + L+EG L + ++ M K
Sbjct: 90 SELANLEAIDCGKPLDEAAWDMDDVAGCFEYYADLAEG---LDAKQKTPLSLPMDTFKGY 146
Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
+ P+GVVG I WNYP + ++ +G ++K SE AS + C I
Sbjct: 147 ILKEPIGVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASLT-CLELADI---CR 202
Query: 244 AVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
VG P +++++TG E G L S VDKI+F GS G IM +A+K + PV+LELG
Sbjct: 203 EVGLPPGVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTTGSSIMTSAAKLVKPVSLELG 262
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GK IV DDVD+ + + ++GQ C+ R VH I F+ ++ K K++
Sbjct: 263 GKSPIIVFDDVDIDKAVEWTMFGCFWTNGQICSATSRLLVHERIADEFLDKLVKWTKNIK 322
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG-SFGHLSEGAVDQYFPPTV 419
P +G + E++ V++A ++GA +L G HL +G + P +
Sbjct: 323 ISDPFEEGCRLGPVVSKGQYERVLKFVSNARNEGATVLCGGVRPEHLKKG---YFVEPAI 379
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ NV +M++ +EE FGP + + F+T++E ++LANDS+YGL AV S R ++
Sbjct: 380 VSNVTTSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGLAGAVLSNDLERCDRVSKA 439
Query: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV---VEDRWWPYI 536
Q G+ +N + CQ+ P+GG K SGFGR G GL VK V + D W +
Sbjct: 440 FQAGIVWVN-CSQPCFCQA-PWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWY 497
Query: 537 K 537
K
Sbjct: 498 K 498
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | ||||||
| 255556370 | 593 | aldehyde dehydrogenase, putative [Ricinu | 0.996 | 1.0 | 0.885 | 0.0 | |
| 225431946 | 593 | PREDICTED: aldehyde dehydrogenase 22A1 [ | 0.993 | 0.996 | 0.862 | 0.0 | |
| 224101571 | 594 | predicted protein [Populus trichocarpa] | 0.998 | 1.0 | 0.862 | 0.0 | |
| 356521770 | 597 | PREDICTED: aldehyde dehydrogenase 22A1-l | 1.0 | 0.996 | 0.845 | 0.0 | |
| 42572293 | 596 | aldehyde dehydrogenase 22A1 [Arabidopsis | 0.998 | 0.996 | 0.841 | 0.0 | |
| 110735945 | 596 | betaine aldehyde dehydrogenase like prot | 0.998 | 0.996 | 0.840 | 0.0 | |
| 356564784 | 596 | PREDICTED: aldehyde dehydrogenase 22A1-l | 1.0 | 0.998 | 0.843 | 0.0 | |
| 357448941 | 595 | Aldehyde dehydrogenase 22A1 [Medicago tr | 0.996 | 0.996 | 0.838 | 0.0 | |
| 297833440 | 594 | ALDH22a1 [Arabidopsis lyrata subsp. lyra | 0.994 | 0.996 | 0.835 | 0.0 | |
| 356556008 | 597 | PREDICTED: aldehyde dehydrogenase 22A1-l | 0.998 | 0.994 | 0.821 | 0.0 |
| >gi|255556370|ref|XP_002519219.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223541534|gb|EEF43083.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/595 (88%), Positives = 563/595 (94%), Gaps = 2/595 (0%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + +IVLAFAYAICRFLLMLIP NVPSIDVDASDVLD GNQ +NSFIYIPPRGRT
Sbjct: 1 MAFWWPIIVLAFAYAICRFLLMLIPTNVPSIDVDASDVLD-GNQKEENSFIYIPPRGRTQ 59
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
Q E KVQCYEPATMKYLG+FPALS EV ERV QARKAQ++WAKSSFKQRRQFLRILLKY
Sbjct: 60 QQERKVQCYEPATMKYLGFFPALSPTEVKERVTQARKAQRIWAKSSFKQRRQFLRILLKY 119
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTM+DASLGEIMTTCEKITWLLSEGE+WLKPEYRSSGRSM+HK
Sbjct: 120 IIEHQELICEVSSRDTGKTMIDASLGEIMTTCEKITWLLSEGEQWLKPEYRSSGRSMLHK 179
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
KAKVEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGN IVIKVSENASWSGCFYFRIIQA
Sbjct: 180 KAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSIVIKVSENASWSGCFYFRIIQA 239
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVD+ITGFAETGEALVSS DK+IFVGSPGVG+MIMRNA+ TL PVTLELG
Sbjct: 240 ALAAVGAPENLVDIITGFAETGEALVSSADKVIFVGSPGVGKMIMRNAANTLVPVTLELG 299
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFIVC+DVDVPHVAQIAVRAALQSSGQNCAGAERFYVH+DIY+ FVS+VAKIVKSVS
Sbjct: 300 GKDAFIVCEDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHKDIYSSFVSEVAKIVKSVS 359
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHS+KLQNLVNDA+DKGA I ARGSFGHL EGAVDQYFPPT++
Sbjct: 360 AGPPLTGRYDMGAICLQEHSDKLQNLVNDAIDKGAVIEARGSFGHLGEGAVDQYFPPTIL 419
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNHTMKLM+EE FGPIMPIMKF+TDEE VKLAND RYGLGCAVFSGSQ RA+EIA+QI
Sbjct: 420 VNVNHTMKLMREETFGPIMPIMKFSTDEEAVKLANDCRYGLGCAVFSGSQRRAKEIASQI 479
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
CGVAAINDFAS YMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDRWWPYIKTKI
Sbjct: 480 HCGVAAINDFASTYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRWWPYIKTKI 539
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRND 595
PKPIQYPV+ENGFEFQESLVEALYGLNIWDRLRALVNVLK+L+EQN+ ++RND
Sbjct: 540 PKPIQYPVSENGFEFQESLVEALYGLNIWDRLRALVNVLKMLSEQNSS-GNKRND 593
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431946|ref|XP_002277743.1| PREDICTED: aldehyde dehydrogenase 22A1 [Vitis vinifera] gi|296083253|emb|CBI22889.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/597 (86%), Positives = 562/597 (94%), Gaps = 6/597 (1%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + L+VL FA+A+CRFLLMLIPPNVPSIDVDASDVLDDG +T +NSFIYIP RGRTP
Sbjct: 1 MAFWWPLLVLGFAFALCRFLLMLIPPNVPSIDVDASDVLDDG-KTKENSFIYIPSRGRTP 59
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
+ KVQCYEPATMKYLG+ PAL EV E VAQARKAQK+WA+SSFKQRRQFLRILLKY
Sbjct: 60 E---KVQCYEPATMKYLGFCPALRPDEVREHVAQARKAQKIWARSSFKQRRQFLRILLKY 116
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPEYRS+GRSM+HK
Sbjct: 117 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPEYRSTGRSMLHK 176
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
AKVEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGNG+VIKVSE+ASWSGCFY RIIQA
Sbjct: 177 TAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGVVIKVSEHASWSGCFYLRIIQA 236
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVG+ IMRNAS TL PVTLELG
Sbjct: 237 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGKTIMRNASDTLIPVTLELG 296
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFIVC+DVDVPHVAQIAVRAALQSSGQNCAGAERFYVH+DIY+ FV++V +IVKSV+
Sbjct: 297 GKDAFIVCEDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHQDIYSKFVAEVVRIVKSVT 356
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL+GKYDMGA+C+ EHSEKLQNLVN+ALDKGAE RGSFG+L E AVDQ+FPPTV+
Sbjct: 357 AGPPLSGKYDMGAICMQEHSEKLQNLVNEALDKGAEFAGRGSFGNLGEDAVDQFFPPTVL 416
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNH+M+LMQEEAFGPI+PIMKF++DEEVVKLANDSRYGLGCAVFSGSQ RA+ IA+QI
Sbjct: 417 VNVNHSMQLMQEEAFGPILPIMKFSSDEEVVKLANDSRYGLGCAVFSGSQRRAKAIASQI 476
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
CG+AAINDFAS YMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDRWWP+IKTKI
Sbjct: 477 HCGMAAINDFASTYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRWWPFIKTKI 536
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSS--RRND 595
PKPIQYPVA+NGFEFQESLVEALYGLN+WDRLRALV+VLK+LTEQNTP +S R+ND
Sbjct: 537 PKPIQYPVADNGFEFQESLVEALYGLNVWDRLRALVHVLKMLTEQNTPSNSTKRKND 593
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224101571|ref|XP_002312334.1| predicted protein [Populus trichocarpa] gi|222852154|gb|EEE89701.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/595 (86%), Positives = 551/595 (92%), Gaps = 1/595 (0%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + LIV A AYAICRFLLMLIP NVPSIDVDASDV +GNQT +NSFIYIPPRGR
Sbjct: 1 MAFWWPLIVAASAYAICRFLLMLIPFNVPSIDVDASDV-TEGNQTQENSFIYIPPRGRAQ 59
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLG+FPALS AEV +RVAQARKAQK+WA+SSFKQRRQFLRILLKY
Sbjct: 60 QSDKKVQCYEPATMKYLGFFPALSPAEVHDRVAQARKAQKIWAESSFKQRRQFLRILLKY 119
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR SGR+M +K
Sbjct: 120 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRCSGRAMFYK 179
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
K++VEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGN IVIKVSENASWSG FYFRIIQA
Sbjct: 180 KSRVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSIVIKVSENASWSGLFYFRIIQA 239
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVG+MIMRNAS TL PVTLELG
Sbjct: 240 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGKMIMRNASDTLIPVTLELG 299
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKD FIVC+D DV HVAQIAVRA LQSSGQNCAGAERFYVHRDIY+ FVS+V KIVKSVS
Sbjct: 300 GKDPFIVCEDADVSHVAQIAVRAVLQSSGQNCAGAERFYVHRDIYSSFVSEVTKIVKSVS 359
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
GPPLAG+YDMGA+CL EHS+KLQ LVNDAL+KGAEI+ RGSFGHL EGAVDQ++PPTV+
Sbjct: 360 VGPPLAGRYDMGAICLQEHSDKLQILVNDALEKGAEIVVRGSFGHLGEGAVDQFYPPTVL 419
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNV+HTMKLMQEE FGP+MPIMKF+TDEE VKLANDSRYGLGCAVFSGSQ RAREIA+QI
Sbjct: 420 VNVDHTMKLMQEETFGPVMPIMKFSTDEEAVKLANDSRYGLGCAVFSGSQRRAREIASQI 479
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
CGVAA+NDFASNYMCQSLPFGGVK SGFGRFAGVEGLRACCLVKSVVEDR WPYIKTKI
Sbjct: 480 HCGVAAVNDFASNYMCQSLPFGGVKHSGFGRFAGVEGLRACCLVKSVVEDRLWPYIKTKI 539
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRND 595
PKPIQYPV EN FEFQ+SLVEALYGLNI D+LRA VNVLK+++EQN+ S RN+
Sbjct: 540 PKPIQYPVGENSFEFQQSLVEALYGLNIRDKLRAGVNVLKIMSEQNSSNSKSRNE 594
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521770|ref|XP_003529524.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/597 (84%), Positives = 552/597 (92%), Gaps = 2/597 (0%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + L+VLAFAY ICRFLLMLIPP VPSIDVD SDVLDDGNQ +NSFIY+PPRG +
Sbjct: 1 MAFWWPLLVLAFAYGICRFLLMLIPPKVPSIDVDTSDVLDDGNQAQENSFIYVPPRGTSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS VQCYEPATMKYLGY PAL+ EV +RV++ RKAQK+WAKSSFKQRR FLRILLKY
Sbjct: 61 QSGKIVQCYEPATMKYLGYVPALTHEEVKDRVSKVRKAQKMWAKSSFKQRRLFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
II+HQ LICEISSRDTGKTMVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK
Sbjct: 121 IIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
+AKVEFHPLGV+GAIVSWNYPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+
Sbjct: 181 RAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQS 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAA+GAPE+LV+VITGFAETGEALVSSVDK+IFVGSPGVG+MIM NAS TL PVTLELG
Sbjct: 241 ALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNASNTLIPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFIVC+DVD+ HVAQIAVRA LQSSGQNCAGAERFYVHR+IY+ FVS+V KIVKSV+
Sbjct: 301 GKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIVKSVT 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL GKYDMGALC+ EHSEKL+ LVNDALDKGAEI+ARG+ GH+ E AVDQYFPPTVI
Sbjct: 361 AGPPLVGKYDMGALCMHEHSEKLEGLVNDALDKGAEIVARGNLGHIGEDAVDQYFPPTVI 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNHTM+LMQEEAFGPIMPIMKF++DEEVV+LANDS+YGLGCAVFSG+Q RAREIA+QI
Sbjct: 421 VNVNHTMRLMQEEAFGPIMPIMKFSSDEEVVRLANDSKYGLGCAVFSGNQSRAREIASQI 480
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
GVAA+NDFAS YMCQSLPFGGVK SGFGRF GVEGLRACCLVK+VVEDRWWP++KTKI
Sbjct: 481 HAGVAAVNDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKI 540
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSS--RRND 595
PKPIQYPVAENGFEFQESLVEALYGL IWDRLRALVNVLK+LTEQN SS RRND
Sbjct: 541 PKPIQYPVAENGFEFQESLVEALYGLGIWDRLRALVNVLKMLTEQNPGGSSNKRRND 597
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42572293|ref|NP_974242.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] gi|118595572|sp|Q0WSF1.2|AL221_ARATH RecName: Full=Aldehyde dehydrogenase 22A1; AltName: Full=Novel aldehyde dehydrogenase family 22 member A1; Flags: Precursor gi|42406419|emb|CAE48165.1| putative aldehyde dehydrogenase [Arabidopsis thaliana] gi|332640912|gb|AEE74433.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/594 (84%), Positives = 548/594 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKI
Sbjct: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKI 540
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 594
PKPIQYPVAEN FEFQE+LVE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 541 PKPIQYPVAENAFEFQEALVETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 594
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110735945|dbj|BAE99947.1| betaine aldehyde dehydrogenase like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/594 (84%), Positives = 547/594 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSID DASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDADASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKI
Sbjct: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKI 540
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 594
PKPIQYPVAEN FEFQE+LVE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 541 PKPIQYPVAENAFEFQEALVETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 594
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564784|ref|XP_003550628.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/596 (84%), Positives = 551/596 (92%), Gaps = 1/596 (0%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + L+VLAFAY ICRFLLMLIPP VPSIDVD SDVLDDGNQ +NSFIY+PPRG +
Sbjct: 1 MAFWWPLLVLAFAYGICRFLLMLIPPKVPSIDVDTSDVLDDGNQAQENSFIYVPPRGTSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS VQCYEPATMKYLGY PAL+R EV +RVA+ RKAQK+WAKSSFKQRR FLRILLKY
Sbjct: 61 QSGKIVQCYEPATMKYLGYVPALTRDEVKDRVAKVRKAQKMWAKSSFKQRRLFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
II+HQ LICEISSRDTGKTMVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK
Sbjct: 121 IIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
+AKVEFHPLGV+GAIVSWNYPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+
Sbjct: 181 RAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQS 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAA+GAPE+LV+VITGFAETGEALVSSVDK+IFVGSPGVG+MIM NA+ TLTPVTLELG
Sbjct: 241 ALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNAANTLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFIVC+DVD+ HVAQIAVRA LQSSGQNCAGAERFYVHR+IY+ FVS V KIVKSV+
Sbjct: 301 GKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSLVTKIVKSVT 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL GKYDMGALC+ EHSEKL+ LVNDALDKGAEI+ARGSFGH+ E AVDQYFPPTVI
Sbjct: 361 AGPPLVGKYDMGALCMHEHSEKLEGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVI 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNHTM+LMQEEAFGPIMPIMKF++DEEVV+LAN+S+YGLGCAVFSG+Q RAREIA+QI
Sbjct: 421 VNVNHTMRLMQEEAFGPIMPIMKFSSDEEVVRLANESKYGLGCAVFSGNQSRAREIASQI 480
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
GVAA+NDFAS YMCQSLPFGGVK SGFGRF GVEGLRACCLVK+V EDRWWP++KTKI
Sbjct: 481 HAGVAAVNDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVAEDRWWPFVKTKI 540
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSS-RRND 595
PKPIQYPVAENGFEFQESLVEALYG+ IWDRLRALVNVLK+LTEQ+ RRND
Sbjct: 541 PKPIQYPVAENGFEFQESLVEALYGIGIWDRLRALVNVLKMLTEQHPGGGGKRRND 596
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357448941|ref|XP_003594746.1| Aldehyde dehydrogenase 22A1 [Medicago truncatula] gi|124359955|gb|ABN07971.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355483794|gb|AES64997.1| Aldehyde dehydrogenase 22A1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/593 (83%), Positives = 552/593 (93%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF +S++VLAFA+AIC+FLL+LIPP VPSIDVDASDVL+ GNQ+ +N+FIY+PPRG
Sbjct: 1 MAFWWSILVLAFAFAICKFLLLLIPPKVPSIDVDASDVLEVGNQSQENNFIYVPPRGTAQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS KVQCYEPATMKYLG+ PAL+ EV ER+ + RKAQK+WAK+SFKQRRQFLRILLKY
Sbjct: 61 QSGKKVQCYEPATMKYLGFLPALAPDEVKERIEKVRKAQKMWAKTSFKQRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
II+HQ LICEISSRDTGKTMVDASLGEIMTTCEKI WLLSEGEK LKPEYRSSGRSM+HK
Sbjct: 121 IIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEKCLKPEYRSSGRSMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
+A+VEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGNGIVIK+SE+ASWSGCFYFRIIQ+
Sbjct: 181 RARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQS 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAA+GAPE+LV+VITGF ETGEALVSSVDK+IFVGSPGVG+MIM+NAS+TL PVTLELG
Sbjct: 241 ALAAIGAPEDLVEVITGFGETGEALVSSVDKVIFVGSPGVGKMIMKNASETLIPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFIVC+DVDV HVAQIAVRA LQS GQNCAGAERFYVHR+IY FVS+V KI+KSV+
Sbjct: 301 GKDAFIVCEDVDVDHVAQIAVRAVLQSGGQNCAGAERFYVHRNIYPSFVSKVTKIIKSVT 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPLAGKYDMGALC+ EHSEKL LVNDALDKGAEI+ARGSFGH+ E AVDQYFPPTVI
Sbjct: 361 AGPPLAGKYDMGALCMHEHSEKLLGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVI 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNH+MKLMQEEAFGPIMPIMKF++DEEV+KLANDS+YGL CAVFSGSQ AREIA+ I
Sbjct: 421 VNVNHSMKLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLSCAVFSGSQSHAREIASHI 480
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
CGVAA+NDFASNYMCQSLPFGGVK SGFGRF GVEGLRACCLVKSVVEDRWWP+IKTKI
Sbjct: 481 HCGVAAVNDFASNYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKI 540
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRR 593
PKPIQYPVAENGFEFQESLVEALYGL+IWDRL+ALVNVLK+LTEQN+ +++
Sbjct: 541 PKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVNVLKMLTEQNSTGGNKK 593
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297833440|ref|XP_002884602.1| ALDH22a1 [Arabidopsis lyrata subsp. lyrata] gi|297330442|gb|EFH60861.1| ALDH22a1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/594 (83%), Positives = 545/594 (91%), Gaps = 2/594 (0%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGEQWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HV+Q+AVR LQSSGQNCAGAERFYVH+DIY F+SQV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVSQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFISQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKI
Sbjct: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKI 540
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 594
PKPIQ EN FEFQE+LVE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 541 PKPIQ--ATENAFEFQEALVETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 592
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556008|ref|XP_003546319.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1045 bits (2703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/594 (82%), Positives = 548/594 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
MAF + L+VLA A+AIC+FLL+LIPP VPSIDVDASDVLDDG+ T +NSFIY+PPRG
Sbjct: 1 MAFWWPLLVLALAFAICKFLLILIPPKVPSIDVDASDVLDDGSLTQENSFIYVPPRGTAQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS KVQCYEPATMKYLGY PAL+ EV E+V + RKAQK+WAK+SFK+RR FLRILLKY
Sbjct: 61 QSSGKVQCYEPATMKYLGYVPALTPDEVKEQVEKVRKAQKMWAKTSFKKRRHFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
II+HQ LICEISSRDTGKTMVDASLGEIMTTCEKI WLLSEGE+ LKPEYRSSGR+M+HK
Sbjct: 121 IIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQCLKPEYRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++KVEF PLGV+GAIVSWNYPFHNIFNPMLAAVFSGNGIVIK+SE+ASWSGCFYFRIIQ+
Sbjct: 181 RSKVEFLPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQS 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAA+GAPE LV+VITGFAETGEALV+S DK+IFVGSPGVG+MIM NA++TL PVTLELG
Sbjct: 241 ALAAIGAPEELVEVITGFAETGEALVASADKVIFVGSPGVGKMIMSNAAETLIPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKD FIVC+D DV HVAQ+AVRAALQSSGQNCAGAERFYVHR+IYA FVS+V KI+KSV+
Sbjct: 301 GKDVFIVCEDADVDHVAQVAVRAALQSSGQNCAGAERFYVHRNIYASFVSKVTKIIKSVT 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPLAGKYDMGALC+ HSEKL+ L+NDALDKGAEI+ARGSFGH+ E AVDQYFPPTVI
Sbjct: 361 AGPPLAGKYDMGALCMHAHSEKLEALINDALDKGAEIIARGSFGHIGEDAVDQYFPPTVI 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
VNVNH+M+LMQEEAFGPIMPIMKF++DEEVV+LANDS+YGLGC VFSGSQ RAREIA+QI
Sbjct: 421 VNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVRLANDSKYGLGCNVFSGSQSRAREIASQI 480
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
CG+AA+NDFA+ YMCQSLPFGGVK+SGFGRF GVEGLRACCLVKSVVEDRWWP+IKT I
Sbjct: 481 HCGLAAVNDFAATYMCQSLPFGGVKNSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTVI 540
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 594
PKPIQYPVAENGFEFQESLVEALYGL++WDRL+ALVNVLK+LTEQN+ SR+
Sbjct: 541 PKPIQYPVAENGFEFQESLVEALYGLSVWDRLQALVNVLKMLTEQNSTSGSRKK 594
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | ||||||
| TAIR|locus:2103425 | 596 | ALDH22A1 "AT3G66658" [Arabidop | 0.996 | 0.994 | 0.843 | 9.8e-277 | |
| UNIPROTKB|G5EHY1 | 632 | MGCH7_ch7g516 "Succinate-semia | 0.895 | 0.843 | 0.414 | 1.1e-108 | |
| CGD|CAL0001732 | 614 | orf19.1865 [Candida albicans ( | 0.959 | 0.929 | 0.383 | 8.1e-108 | |
| DICTYBASE|DDB_G0279613 | 589 | DDB_G0279613 "aldehyde dehydro | 0.855 | 0.864 | 0.416 | 8.1e-108 | |
| SGD|S000001081 | 644 | MSC7 "Protein of unknown funct | 0.863 | 0.798 | 0.401 | 2.3e-101 | |
| POMBASE|SPBC21C3.15c | 522 | SPBC21C3.15c "aldehyde dehydro | 0.831 | 0.948 | 0.367 | 9e-93 | |
| ASPGD|ASPL0000002032 | 642 | AN6636 [Emericella nidulans (t | 0.858 | 0.795 | 0.336 | 5.5e-70 | |
| UNIPROTKB|P96405 | 487 | MT0233 "PROBABLE ALDEHYDE DEHY | 0.776 | 0.948 | 0.305 | 7.5e-57 | |
| TAIR|locus:2027186 | 501 | ALDH10A8 "AT1G74920" [Arabidop | 0.791 | 0.940 | 0.326 | 1.2e-56 | |
| TAIR|locus:2100449 | 503 | ALDH10A9 "AT3G48170" [Arabidop | 0.796 | 0.942 | 0.314 | 1.1e-55 |
| TAIR|locus:2103425 ALDH22A1 "AT3G66658" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2660 (941.4 bits), Expect = 9.8e-277, P = 9.8e-277
Identities = 500/593 (84%), Positives = 548/593 (92%)
Query: 1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL G T +NSFIYIPPRGR+
Sbjct: 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS+ KVQCYEPATMKYLGYFPALS EV+ERV +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240
Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GKDAFI+C+D DV HVAQ+AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+NVNH MK+M+EEAFGPIMPIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QI
Sbjct: 421 INVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQI 480
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 540
QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKI
Sbjct: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKI 540
Query: 541 PKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRR 593
PKPIQYPVAEN FEFQE+LVE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 541 PKPIQYPVAENAFEFQEALVETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTR 593
|
|
| UNIPROTKB|G5EHY1 MGCH7_ch7g516 "Succinate-semialdehyde dehydrogenase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
Identities = 227/548 (41%), Positives = 336/548 (61%)
Query: 44 QTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA 103
+TP+ I P + S T +QCY PAT ++LG+ + A +D + QA AQK WA
Sbjct: 87 KTPEMVEILQKPSIKVSGS-TAIQCYNPATGQFLGFVNPATPAAIDRAIEQAATAQKKWA 145
Query: 104 KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGE 163
+SF++RR+ LR +L+YI+++QE IC ++ D+GKTMVDA LGEI+ T EK+ W ++ GE
Sbjct: 146 LTSFRERRKVLRSMLQYILDNQEEICRVAGMDSGKTMVDAQLGEILVTVEKLQWTIAHGE 205
Query: 164 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
K L+PE R + M++K+ V + PLGV+ A+VSWNYPFHN+ P+++A+F+GNGI++KV
Sbjct: 206 KALRPERRPTNLLMMYKRNSVHYEPLGVIAALVSWNYPFHNLLGPIISAIFAGNGILVKV 265
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG 281
SEN +WS ++ I + AL A G +L+ + + + + S + I F+GS V
Sbjct: 266 SENTAWSSSYFASIARGALFAHGYDPSLIQTVACWPQVAGHITSHKGISHITFIGSQAVA 325
Query: 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDV--DVPHVAQIAVRAALQSSGQNCAGAERFY 339
+ +A+K LTPV ELGGKDAFIV D D+ + ++ +R QS+GQNC G ER
Sbjct: 326 HKVAESAAKVLTPVCAELGGKDAFIVLDSAAKDLNRIVEMMLRGTFQSAGQNCIGIERII 385
Query: 340 VHRDIYALFVSQVAKIVKSVSAGP-PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
+Y V +A+ V+ + GP PL D+GA+ ++L++LV DA+ GA +L
Sbjct: 386 ATPAVYDRIVLALAERVRGLRVGPGPLDA--DVGAMVSDASFDRLEHLVADAVRCGARLL 443
Query: 399 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF--NTDEEVVKLAND 456
A G + YF PT++V+V M L +EE FGPIM +M+ NT + V+ +AN
Sbjct: 444 AGGKRLIHPQHPSGHYFTPTLVVDVTPDMALAREECFGPIMTLMRAPANTAKAVLDVANA 503
Query: 457 SRYGLGCAVFS-GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGV 515
+GLG +VF S +E+ ++ G+ A+NDFA+ Y Q LPFGGV SG+GRFAG
Sbjct: 504 PDFGLGGSVFGRDSDPVLKEVVRGLRTGMVAVNDFATYYAVQ-LPFGGVGGSGYGRFAGE 562
Query: 516 EGLRACCLVKSVVEDR-WWPYIKTKIPKPIQYPVAEN--GFEFQESLVEALYGLNIWDRL 572
EGLR KS+ EDR W ++T IP P++YPV + + F + +VE YGL + ++
Sbjct: 563 EGLRGISNAKSICEDRAGWLGVRTAIPPPMRYPVRDQDRSWRFAKGVVELGYGLTLGAKV 622
Query: 573 RALVNVLK 580
R LV + K
Sbjct: 623 RGLVGLAK 630
|
|
| CGD|CAL0001732 orf19.1865 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 228/594 (38%), Positives = 341/594 (57%)
Query: 3 FLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVL---DDGNQTPDNSFIYIPPRGRT 59
F +IV Y +++ P N I+ L ++ +Y PP
Sbjct: 21 FFIGVIVPVLYYVYNKYITAQ-PNNYNKIEAPVKITLPIPEEARPHWKGKRLY-PPSISI 78
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
P K+Q Y PAT +YLG F +R ++DE + A KAQK WA SSF RR+ L+ +
Sbjct: 79 PNEPDKIQSYCPATGQYLGVFNCTTREDMDEMINNASKAQKKWANSSFSLRRKLLKTMAS 138
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI- 178
+I+E+QE I ++ RD+GKT +DAS+GEIM T EK+ W++S GEK L+P R + +
Sbjct: 139 FILENQENIARVACRDSGKTKLDASMGEIMVTLEKLNWIISHGEKVLRPSQRPGPANFLI 198
Query: 179 --HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
K A+V + P+GVV +IVSWNYPFHN+ P++A++F+GN I++K SEN WS ++ +
Sbjct: 199 GMMKNAEVRYEPMGVVTSIVSWNYPFHNLMGPVIASLFTGNAIIVKCSENVVWSSQWFIK 258
Query: 237 IIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294
++ L + ENLV + F E VS + I F+GS V ++ A+K LTP
Sbjct: 259 FVRKCLQELDIDENLVQLCCCFPNDAEYFVSHPGLSHITFIGSKNVAHHVVSQAAKQLTP 318
Query: 295 VTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
+ELGGKDA IV DDV DV ++ + +R QS+GQNC G ER +Y V
Sbjct: 319 CVVELGGKDALIVLDDVKDVQSLSSVILRGTFQSAGQNCIGVERVICLPKVYEQLVEIFT 378
Query: 354 KIVKSVSAGPPL--AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 411
+ +KS G + + DMGA+ +L+ L+ DA+ KGA ++ G
Sbjct: 379 ERIKSFRVGSDIDQLDEIDMGAMISDNRFAQLEGLIEDAVSKGARLIHGGKQYQHPNYPQ 438
Query: 412 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 471
YF PT++V+V+ TMK+ QEE FGP++ +++ N E+ V +AN + +GLG ++F + +
Sbjct: 439 GHYFEPTLLVDVDPTMKIFQEEVFGPVLTMIRANDAEDAVNIANGTEFGLGNSIFGSNFN 498
Query: 472 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531
+ +IA Q+Q G AINDFA+ Y+ Q LPFGG+K SG+G+F G EGL C KSV+ D+
Sbjct: 499 QVNQIADQLQSGNVAINDFATFYVAQ-LPFGGIKQSGYGKFGGEEGLTGLCNAKSVIMDK 557
Query: 532 WWPYIK-----TKIPKPIQYPVAEN--GFEFQESLVEALYGLNIWDRLRALVNV 578
P ++ T IP PI YP+ + + F +SL A Y +W++++AL N+
Sbjct: 558 --PLLRLFGVATSIPPPIDYPIENDKKAWNFVKSLNIAGYDGRLWNKVKALKNL 609
|
|
| DICTYBASE|DDB_G0279613 DDB_G0279613 "aldehyde dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 214/514 (41%), Positives = 314/514 (61%)
Query: 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
K+ C PAT K +G +L EV + A+KAQ W +++F +RRQ L+ + I+H
Sbjct: 67 KIDCVNPATGKSMGIVNSLKPDEVKTCLEAAQKAQVEWGQTTFDERRQILQDFIDMFIKH 126
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
+ + E S RDTGKT +A GEI+T+CEK+ +L+ GEK LK E R M K A++
Sbjct: 127 ENELVEASMRDTGKTRFEAMFGEILTSCEKLRYLIQNGEKALKTEDRIVPMLMGTKSARL 186
Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
E+HPLGV+G I+ WNYP H+I + AA+F+GN ++KVSE ++ S + +++ L+
Sbjct: 187 EYHPLGVIGIIIPWNYPIHSIISAAAAAIFAGNAALVKVSEWSTHSKILFEHLLRKVLSN 246
Query: 245 VGAPENLVDVITGFAETGEALV-SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303
G NL+ ++ G ETGEALV S VDKI+F+GSPG G+ +M+ AS +LTPV LELGGKD
Sbjct: 247 RGYDPNLIQILPGMGETGEALVRSGVDKILFIGSPGTGKRVMKAASDSLTPVILELGGKD 306
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
IV DDV++ I R + GQNC +ER +VH IY F Q+A + S+ GP
Sbjct: 307 PMIVFDDVELDWALAIVQRGCFINLGQNCISSERVFVHEKIYDQFCKQMADKINSLKQGP 366
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 423
P G +D G++ + +K+++LV A+ +GA +LA G YF PTV+ NV
Sbjct: 367 PEEGHFDFGSMTMPAQVDKVEHLVGTAIKEGATLLAGGKRNPAYPKG--NYFLPTVLANV 424
Query: 424 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 483
M + QEEAFGP+ I+KF+ + ++++ AN + +GLGC++ S RA I ++I G
Sbjct: 425 TENMTIFQEEAFGPVCSIIKFSDEHDLIRKANGTAFGLGCSILSSDIKRAERIGSKISTG 484
Query: 484 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKP 543
+ IND+ ++Y+ Q LPFGG K+SGFGRF G EGLR S++ DR+ IKT +P+
Sbjct: 485 MLTINDYGASYLIQDLPFGGCKESGFGRFNGPEGLRGFSREVSILTDRFG--IKTPVPRL 542
Query: 544 IQYPVAENGFEFQESLVEALYGLNIWDRLRALVN 577
I+YP+ + +Y I ++LRA +N
Sbjct: 543 IRYPIDPASVGIIRQAIYMIYQRGIVNKLRAALN 576
|
|
| SGD|S000001081 MSC7 "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 218/543 (40%), Positives = 319/543 (58%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
P+ +QC+ PAT +YLG FP+ + A++DE V++A KAQ W S F +R + L L
Sbjct: 106 PEEPNFIQCHCPATGQYLGSFPSKTEADIDEMVSKAGKAQSTWGNSDFSRRLRVLASLHD 165
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI- 178
YI+ +Q+LI ++ RD+GKTM+DAS+GEI+ T EKI W + G++ L+P R +
Sbjct: 166 YILNNQDLIARVACRDSGKTMLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFFM 225
Query: 179 --HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
+K A++ + PLGV+ +IVSWNYPFHN+ P++AA+F+GN IV+K SE WS F+
Sbjct: 226 KWYKGAEIRYEPLGVISSIVSWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFVE 285
Query: 237 IIQAALAAVGAPENLVDVI-----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNAS 289
+I+ L A +LV + T ++ S I F+GS V I++ A+
Sbjct: 286 LIRKCLEACDEDPDLVQLCYCLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCAA 345
Query: 290 KTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
K+LTPV +ELGGKDAFIV D ++ ++ I +R QSSGQNC G ER V ++ Y
Sbjct: 346 KSLTPVVVELGGKDAFIVLDSAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY--- 402
Query: 349 VSQVAKIVKS-VSAGPPLAGK-------YDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
+ KI+ ++A P G DMGA+ ++L+ LV DA+ KGA +L
Sbjct: 403 -DDLVKILNDRMTANPLRQGSDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQG 461
Query: 401 GS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
GS F H + YF PT++V+V MK+ Q E FGPI+ +MK + V+LAN + +
Sbjct: 462 GSRFKH-PKYPQGHYFQPTLLVDVTPEMKIAQNEVFGPILVMMKAKNTDHCVQLANSAPF 520
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
GLG +VF +A +Q G AINDFA+ Y+CQ LPFGG+ SG+G+F G EGL
Sbjct: 521 GLGGSVFGADIKECNYVANSLQTGNVAINDFATFYVCQ-LPFGGINGSGYGKFGGEEGLL 579
Query: 520 ACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENG--FEFQESLVEALYGLNIWDRLRALVN 577
C KSV D P++ T+IPKP+ YP+ N + F +S + Y + W R+++L +
Sbjct: 580 GLCNAKSVCFDTL-PFVSTQIPKPLDYPIRNNAKAWNFVKSFIVGAYTNSTWQRIKSLFS 638
Query: 578 VLK 580
+ K
Sbjct: 639 LAK 641
|
|
| POMBASE|SPBC21C3.15c SPBC21C3.15c "aldehyde dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 185/503 (36%), Positives = 294/503 (58%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
CY P LG +++++D+ + A +AQK W +SF +RR FL+ L + II +Q+
Sbjct: 7 CYCPGDGSLLGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIRNQDK 66
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
EI+ +DTGKT+VDA+ GEI+ T EKI W L+ GE+ L+P R + +K V++
Sbjct: 67 YAEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGYVKYE 126
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
PLGV+ A+VSWNYP HN P+++A+F+GN IV+K SE +WS Y ++++ L ++G
Sbjct: 127 PLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGH 186
Query: 248 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
LV IT + + L S + I F+GS + +++ +A+K LTP+ LELGGKD
Sbjct: 187 SPELVQCITCLPDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGGKDPC 246
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
I+ DD + + I +R QS+GQNC G ER +Y ++++ + ++ G
Sbjct: 247 ILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRLGMYT 306
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVN 424
DMGA+ + L++L+ DA+ KGA ++ G F H + YF PT++V+
Sbjct: 307 QNDVDMGAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQH-PKYPKGNYFLPTLLVDAT 365
Query: 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
+ MK+ QEE F PI + + + E +++AN + +GLG +VF + + ++ G+
Sbjct: 366 NEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGM 425
Query: 485 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPI 544
A+NDF + Y+ Q +PFGG K SG+GRFAG EGLR C K++ DR+ I T IP +
Sbjct: 426 VAVNDFGAFYLLQ-MPFGGCKKSGYGRFAGYEGLRGICNSKAIAYDRF-SAIHTGIPPAV 483
Query: 545 QYPV--AENGFEFQESLVEALYG 565
YP+ ++ ++F L+ +YG
Sbjct: 484 DYPIPDSQKAWQFVRGLMGTVYG 506
|
|
| ASPGD|ASPL0000002032 AN6636 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 190/564 (33%), Positives = 290/564 (51%)
Query: 26 PNVPSIDV--DASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG--YFP 81
PN P I+ + S D + + + I RG+ +E + Y PA + LG P
Sbjct: 60 PNPPEINPHWEGSKWEDLPQGSEERNVIEGQIRGQW--NENLIMSYCPADGRVLGSGIKP 117
Query: 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141
A + +VD + A +AQ+ WA ++F +RR+ L+ LLKY++EHQ+ I D+GKT V
Sbjct: 118 ATAD-DVDRAIQAASRAQEQWATTTFAERRRVLKTLLKYVLEHQDEIVIACCLDSGKTKV 176
Query: 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201
DA+ GE + T EK+ W + GE+ L PE R + M++KK +V + PLGVV A VSWNYP
Sbjct: 177 DATFGETLVTAEKLKWTIDHGERALSPESRPTNFLMMYKKNQVIYEPLGVVSACVSWNYP 236
Query: 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 261
FHN +P+++A+F+GNGIV+K SE +WS ++ II+ AL G P +LV + +
Sbjct: 237 FHNFISPVISAIFAGNGIVVKPSEQTAWSSVYFLNIIRGALENCGHPRDLVQSVVCLPKV 296
Query: 262 GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV----DVPH 315
+ L S + +I F+GS V + +A+K LTPVT+ELGGKD ++ DD +V
Sbjct: 297 ADHLTSHPGIAQITFIGSRPVAHKVCESAAKALTPVTVELGGKDPSVILDDSRTISEVTS 356
Query: 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 375
VA + +R QS+GQNC G ER +Y + V +K++ G
Sbjct: 357 VASVLMRGVFQSAGQNCIGVERVIALPGVYDKLLDTVTSRIKALRLGS-----------V 405
Query: 376 LLEHSEKLQNLVNDALDKGAEILARGSFGHL--------SEGAV-----DQYFPPTVIVN 422
LL+ N + A D GA +++ SF L S+GA Q+ PT +
Sbjct: 406 LLDTKPNNPNNKSGAPDVGA-MISPASFSRLEFLIQRAVSQGARLVAGGKQFEHPTYPLG 464
Query: 423 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH---------RA 473
T L+ + P M I + V + S + + +Q+
Sbjct: 465 HYFTPTLLADVT--PSMEIAQTELFAPVFLMMRASSVSDAITIANSTQYALGASVFGYNT 522
Query: 474 REIAAQIQCGVAA--IN-DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 530
R++ A + G+ A ++ + +Y LPFGGVK SG+GRFAG EGLR +K++ D
Sbjct: 523 RDVNACVS-GIKAGMVSVNDFGSYYTVQLPFGGVKGSGYGRFAGEEGLRGVSNIKAICVD 581
Query: 531 RWWPYIKTKIPKPIQYPVAENGFE 554
R+ + T+IP + YP+ + E
Sbjct: 582 RFPRLMATRIPPRVDYPIMKGEAE 605
|
|
| UNIPROTKB|P96405 MT0233 "PROBABLE ALDEHYDE DEHYDROGENASE" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 148/485 (30%), Positives = 247/485 (50%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
++I + P + ++ PAT +Y+G P + A+VD VA AR A W +
Sbjct: 11 LFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPH 70
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WL 166
+R + +K + E ++L ++ + +TG+ M + + + +K W
Sbjct: 71 ERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWT 130
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
+ S G+S++ ++ P+GVVGAIV+WN P N + A+ +G IV+K +
Sbjct: 131 ETRTGSYGQSIVSRE------PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAE 184
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMI 284
+ + A VG PE ++ V+ G ETG+AL S+ +D F GS VGR +
Sbjct: 185 TPLTA----NALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREV 240
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
R A++ L P TLELGGK A I+ +DVD+ + V + + ++GQ C R R
Sbjct: 241 GRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSR 300
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
Y V+ V V ++ GPP +G L + +++ + +++GA ++ G G
Sbjct: 301 YDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGG--G 358
Query: 405 HLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463
EG + +F PTV +V++ M + QEE FGP++ I+ ++T+E+ + +ANDS YGL
Sbjct: 359 R-PEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAG 417
Query: 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523
+V++ + +I+ QI+ G IN +A + PFGG K+SG GR G EG+
Sbjct: 418 SVWTTDVPKGIKISQQIRTGTYGINWYAFD---PGSPFGGYKNSGIGRENGPEGVEHFTQ 474
Query: 524 VKSVV 528
KSV+
Sbjct: 475 QKSVL 479
|
|
| TAIR|locus:2027186 ALDH10A8 "AT1G74920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 163/499 (32%), Positives = 250/499 (50%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ-----KVWAKS 105
++I R P + ++ PAT + +G PA + +VD V AR+A K WAK+
Sbjct: 10 LFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAKA 69
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEK 164
R ++LR + + E + + ++ + D GK + +A + + C + L+EG
Sbjct: 70 PGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAEG-- 127
Query: 165 WLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
L + ++ M K+ V PLGVVG I WNYP + ++ +G ++K
Sbjct: 128 -LDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKP 186
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGV 280
SE AS + C I VG P +++V+TGF +E G L S VDKI F GS
Sbjct: 187 SELASVT-CLELADI---CREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFAT 242
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G +M A++ + PV++ELGGK IV DDVD+ A+ A+ ++GQ C+ R V
Sbjct: 243 GSKVMTAAAQLVKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLV 302
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
H I + F+ ++ K K++ P+ +G + EK+ ++ A +GA IL
Sbjct: 303 HESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHG 362
Query: 401 GSFG-HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
GS HL +G + PT+I +V +M++ +EE FGP++ + F +++E ++LANDS Y
Sbjct: 363 GSRPEHLEKGF---FIEPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHY 419
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
GLG AV S R I+ + G+ IN S P+GGVK SGFGR G GL
Sbjct: 420 GLGAAVISNDTERCDRISEAFEAGIVWIN--CSQPCFTQAPWGGVKRSGFGRELGEWGLD 477
Query: 520 ACCLVKSVV----EDRW-W 533
VK V D W W
Sbjct: 478 NYLSVKQVTLYTSNDPWGW 496
|
|
| TAIR|locus:2100449 ALDH10A9 "AT3G48170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 158/502 (31%), Positives = 250/502 (49%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKS 105
++I + P + PAT +GY PA + +V+ V ARKA K WA++
Sbjct: 10 LFIGGQWTEPVLRKTLPVVNPATEDIIGYIPAATSEDVELAVEAARKAFTRNNGKDWARA 69
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEK 164
+ R ++LR + +IE + + + + D GK + +A+ + + C + L+EG
Sbjct: 70 TGAVRAKYLRAIAAKVIERKSELANLEAIDCGKPLDEAAWDMDDVAGCFEYYADLAEG-- 127
Query: 165 WLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
L + ++ M K + P+GVVG I WNYP + ++ +G ++K
Sbjct: 128 -LDAKQKTPLSLPMDTFKGYILKEPIGVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKP 186
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGV 280
SE AS + C I VG P +++++TG E G L S VDKI+F GS
Sbjct: 187 SELASLT-CLELADI---CREVGLPPGVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTT 242
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G IM +A+K + PV+LELGGK IV DDVD+ + + ++GQ C+ R V
Sbjct: 243 GSSIMTSAAKLVKPVSLELGGKSPIIVFDDVDIDKAVEWTMFGCFWTNGQICSATSRLLV 302
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
H I F+ ++ K K++ P +G + E++ V++A ++GA +L
Sbjct: 303 HERIADEFLDKLVKWTKNIKISDPFEEGCRLGPVVSKGQYERVLKFVSNARNEGATVLCG 362
Query: 401 GSFG-HLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 458
G HL +G YF P ++ NV +M++ +EE FGP + + F+T++E ++LANDS+
Sbjct: 363 GVRPEHLKKG----YFVEPAIVSNVTTSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQ 418
Query: 459 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
YGL AV S R ++ Q G+ +N + CQ+ P+GG K SGFGR G GL
Sbjct: 419 YGLAGAVLSNDLERCDRVSKAFQAGIVWVN-CSQPCFCQA-PWGGTKRSGFGRELGEWGL 476
Query: 519 RACCLVKSV---VEDRWWPYIK 537
VK V + D W + K
Sbjct: 477 ENYLSVKQVTQYISDEPWGWYK 498
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q0WSF1 | AL221_ARATH | 1, ., 2, ., 1, ., 3 | 0.8417 | 0.9983 | 0.9966 | yes | no |
| P38694 | MSC7_YEAST | 1, ., 2, ., 1, ., - | 0.3977 | 0.8672 | 0.8012 | yes | no |
| Q9P7K9 | YOSF_SCHPO | 1, ., 2, ., 1, ., - | 0.3616 | 0.8403 | 0.9578 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.998 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 595 | |||
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 0.0 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-156 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-155 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-144 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-141 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-111 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-107 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-105 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-104 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-102 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 5e-99 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 9e-99 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-94 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 9e-94 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-91 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 3e-91 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 5e-91 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 7e-90 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 2e-89 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 5e-89 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 6e-89 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 7e-88 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 9e-88 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 4e-86 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 3e-85 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 6e-85 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 4e-84 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 5e-83 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 2e-82 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 4e-82 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 4e-82 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-81 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 3e-81 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 5e-81 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 9e-81 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 9e-81 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-80 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 2e-80 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 6e-80 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-79 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 2e-78 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 4e-78 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 6e-78 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-77 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 2e-77 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 6e-77 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 4e-76 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-75 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 3e-74 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 4e-74 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 7e-74 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 2e-72 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 5e-72 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 6e-72 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 4e-71 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 6e-71 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-70 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 4e-70 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 2e-69 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 2e-67 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 2e-66 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 2e-65 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 2e-65 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 7e-65 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 7e-64 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 8e-64 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 9e-63 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 7e-62 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 2e-61 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-61 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 3e-61 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 9e-59 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 2e-58 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 4e-58 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 4e-58 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 1e-57 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 3e-56 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 3e-56 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 6e-56 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 7e-56 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 1e-55 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 2e-54 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-52 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 3e-51 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 3e-47 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 1e-46 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-45 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 4e-43 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-42 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 1e-41 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 4e-40 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 6e-39 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 2e-36 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 9e-36 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 4e-33 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 1e-30 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-27 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 6e-26 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 7e-26 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 6e-25 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 2e-22 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 3e-20 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 7e-20 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 5e-17 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 7e-15 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 1e-14 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 4e-13 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 1e-10 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 2e-10 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 1e-08 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 1e-08 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 2e-07 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 8e-06 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 4e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 6e-05 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 5e-04 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 0.001 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 0.002 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 775 bits (2004), Expect = 0.0
Identities = 252/465 (54%), Positives = 321/465 (69%), Gaps = 2/465 (0%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
Y+PAT ++LG PA + +VDE +A AR AQ+ WAK+SF +RR+ LR LLKYI+E+QE I
Sbjct: 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEI 60
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
C ++ RDTGKTMVDASLGEI+ TCEKI W L GEK L+PE R G M +K+A+VE+ P
Sbjct: 61 CRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEP 120
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
LGVVGAIVSWNYPFHN+ P++AA+F+GN IV+KVSE +WS F+ II+ LAA G
Sbjct: 121 LGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHD 180
Query: 249 ENLVDVITGFAETGEALVSSV--DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
+LV ++T ET EAL S D I F+GSP VG+ +M A+++LTPV LELGGKD I
Sbjct: 181 PDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
V DD D+ +A I +R QSSGQNC G ER VH IY + + V+++ GPPL
Sbjct: 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLD 300
Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 426
G D+GA+ ++L+ LV DA++KGA +LA G E YFPPT++V+V
Sbjct: 301 GDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPD 360
Query: 427 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486
MK+ QEE FGP+M +MK + DEE V++AN + YGLG +VF RAR IA+Q++ G+ A
Sbjct: 361 MKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVA 420
Query: 487 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531
INDF NY Q LPFGGVK SGFGRFAG EGLR C KSV EDR
Sbjct: 421 INDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTEDR 465
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 456 bits (1176), Expect = e-156
Identities = 178/459 (38%), Positives = 251/459 (54%), Gaps = 10/459 (2%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + LG P AEV VA+AR AQ+ WA + R Q L + + +H + + E
Sbjct: 3 PATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAE 62
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ +TGK DA E++ E I W + L P +G M +KKA VE+ P G
Sbjct: 63 LLHAETGKPRADA-GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYG 121
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
VVG I WNYP ++ A+ +GN +V+K SE G + A AA G P+
Sbjct: 122 VVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGEL----LAEAWAAAGPPQG 177
Query: 251 LVDVITGFAETGEALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309
++ V+TG TG AL+ + VDK+ F GS GR +M A++ L PV LELGGKD IV
Sbjct: 178 VLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLA 237
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
D D+ A AV A+ ++GQ C ER YVH +Y FV+++ +++ G G
Sbjct: 238 DADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDA 297
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
D+G + + ++ V+DA+ KGA+ L G G S G ++ PTV+ +V H M +
Sbjct: 298 DIGPMTTARQLDIVRRHVDDAVAKGAKALT-G--GARSNGG-GPFYEPTVLTDVPHDMDV 353
Query: 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
M+EE FGP++P+M ++E + LANDSRYGL +VFS RA IA +++ G +IND
Sbjct: 354 MREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSIND 413
Query: 490 FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
+LPFGGVKDSG GR G EGLR C K++
Sbjct: 414 VLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 452 bits (1164), Expect = e-155
Identities = 158/444 (35%), Positives = 227/444 (51%), Gaps = 15/444 (3%)
Query: 89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148
D VA AR A K WA +R LR L + E +E + + + +TGK ++ +LGE+
Sbjct: 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEV 59
Query: 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208
+ + + S + A V PLGVVGAI WN+P
Sbjct: 60 ARAADTFRYYAGLARRLHGEVIPSPDP---GELAIVRREPLGVVGAITPWNFPLLLAAWK 116
Query: 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS 267
+ A+ +GN +V+K SE + ++ A G P +++V+TG E G AL S
Sbjct: 117 LAPALAAGNTVVLKPSELTPLTALLLAELLAEA----GLPPGVLNVVTGDGDEVGAALAS 172
Query: 268 S--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 325
VDKI F GS VG+ IMR A++ L VTLELGGK IV DD D+ + AV A
Sbjct: 173 HPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF 232
Query: 326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385
++GQ C A R VH IY FV ++ + VK++ G PL DMG L +++
Sbjct: 233 GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLA 292
Query: 386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445
+ DA +GA++L G +G + PPTV+ +V+ M + QEE FGP++P++ F
Sbjct: 293 YIEDAKAEGAKLLCGGKRLEGGKGY---FVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFK 349
Query: 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVK 505
+EE ++LAND+ YGL VF+ RA +A +++ G IND++ S PFGGVK
Sbjct: 350 DEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG-AEPSAPFGGVK 408
Query: 506 DSGFGRFAGVEGLRACCLVKSVVE 529
SG GR G GL K+V
Sbjct: 409 QSGIGREGGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 424 bits (1093), Expect = e-144
Identities = 164/472 (34%), Positives = 249/472 (52%), Gaps = 17/472 (3%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
S ++ PAT + + PA + +VD VA AR A K WAK+ +R L
Sbjct: 2 VDSSSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLKAA 61
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ E ++ + E+ + +TGK + +A GE+ + + + K L+ E S
Sbjct: 62 DLLEERRDELAELETLETGKPLAEA-RGEVPRAIDTLRYYAGLARK-LEGETLPSDPG-- 117
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
A PLGVVGAI WN+P + A+ +GN +V+K SE + +
Sbjct: 118 -VLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
+ A G P +++V+TG +E G+ALV VDK+ F GS VGR I + A+K L V
Sbjct: 177 EEA----GLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRV 232
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
TLELGGK+ IV DD D+ + AV A ++GQ C R VH IY FV ++ +
Sbjct: 233 TLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEA 292
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
KS+ G PL D+G L + E++ + + DA ++GA++L G G L +G +
Sbjct: 293 AKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAG-LEKGY---FV 348
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PTV+ +V M++ QEE FGP++ ++ F ++E ++LAND+ YGL VF+ RA
Sbjct: 349 EPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALR 408
Query: 476 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+A +++ G+ IND+ + ++LPFGG K SGFGR G EGL K+V
Sbjct: 409 VARRLEAGMVWINDYTTGDP-EALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 417 bits (1073), Expect = e-141
Identities = 159/469 (33%), Positives = 238/469 (50%), Gaps = 18/469 (3%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
+ ++ PAT + + PA + +VD VA AR A + W++ S ++R LR + +
Sbjct: 12 GASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLL 71
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
E + + + +TGK + +A GEI + I + E + + S
Sbjct: 72 EARAEELAALITLETGKPISEA-RGEIARAADFIRYYAEEARRLEGETIPTDKGSKAL-- 128
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
V PLGVVGAI WN+P + A+ +GN +V+K SE S + A
Sbjct: 129 --VRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEA 186
Query: 242 LAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
G P +++V+TG AE G+ALV+ VD I F GS VGR I A+ L PVTLE
Sbjct: 187 ----GLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLE 242
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV +D D+ AV A ++GQ C A R VH +Y FV ++ S
Sbjct: 243 LGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAAS 302
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
+ G PL D+G L E ++++ + DA+ +GA +LA G + PT
Sbjct: 303 LKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG------GYFVEPT 356
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
++ V M++ +EE FGP++P+++F +EE ++LAND+ YGL A+F+ RA +A
Sbjct: 357 ILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVAR 416
Query: 479 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+++ G+ IND+ LPFGGVK SG GR G GL VK+V
Sbjct: 417 RLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 340 bits (875), Expect = e-111
Identities = 166/468 (35%), Positives = 235/468 (50%), Gaps = 33/468 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + +G P A+ D + A A K W K++ ++R LR I E E +
Sbjct: 4 PATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLAR 63
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
+ + + GK + +A GE+ + W E R GR K+ V
Sbjct: 64 LLTLEQGKPLAEA-RGEVDYAASFLEWFAEEAR-------RIYGRTIPSPAPGKRILVIK 115
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GVV AI WN+P I P LAA G +V+K +E S + + A
Sbjct: 116 QPVGVVAAITPWNFPAAMITRKIAPALAA---GCTVVLKPAEETPLSALALAELAEEA-- 170
Query: 244 AVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
G P +++V+TG AE GEAL +S V KI F GS VG+++M A+ T+ V+LELG
Sbjct: 171 --GLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELG 228
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
G FIV DD D+ A+ + +++GQ C A R YVH IY FV ++ + VK +
Sbjct: 229 GNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLK 288
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
G L DMG L EK++ LV DA+ KGA++L G G ++ PTV+
Sbjct: 289 VGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGK-RLGLGGY---FYEPTVL 344
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+V M +M EE FGP+ PI+ F+T++EV+ AND+ YGL VF+ RA +A +
Sbjct: 345 TDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEAL 404
Query: 481 QCGVAAINDFA-SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+ G+ IN S+ PFGGVK+SG GR G EGL K V
Sbjct: 405 EAGMVGINTGLISD---AEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 329 bits (847), Expect = e-107
Identities = 150/469 (31%), Positives = 232/469 (49%), Gaps = 40/469 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + P S A++D+ VA A+ A W+ + ++RR L + I + E +
Sbjct: 4 PATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELAR 63
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ + + GK + +A E+ + WL L E ++ ++ PLG
Sbjct: 64 LLTLEQGKPLAEAQ-FEVGGA---VAWLRYTASLDLPDEVIEDDD---TRRVELRRKPLG 116
Query: 191 VVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
VV AIV WN+P +LA A+ +GN +V+K S + Q L
Sbjct: 117 VVAAIVPWNFPL------LLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVL-- 168
Query: 245 VGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302
P +++V++G E G AL S + KI F GS G+ +M +A+KTL VTLELGG
Sbjct: 169 ---PPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGN 225
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
DA IV DVD+ VA A +SGQ CA +R YVH IY F + + K+ G
Sbjct: 226 DAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVG 285
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF----GHLSEGAVDQYFPPT 418
L +G + +K++ LV DA KGA++LA G G+ + PPT
Sbjct: 286 DGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGY--------FIPPT 337
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
++ + +++ EE FGP++P++K++ ++EV+ ANDS YGLG +V+S RA +A
Sbjct: 338 IVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVAR 397
Query: 479 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+++ G IN + + PFGG K SG G G+EGL+ + +
Sbjct: 398 RLEAGTVWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 323 bits (830), Expect = e-105
Identities = 144/463 (31%), Positives = 218/463 (47%), Gaps = 21/463 (4%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P + P S V + +AR AQK W ++R+ + ++ + + + I E
Sbjct: 3 PIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAE 62
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE--YRSSG--RSMIHKKAKVEF 186
+ G+ + + GEI E+ +++S E+ L G R + +
Sbjct: 63 ELTWQMGRP-IAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRRE------ 115
Query: 187 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246
PLGVV I WNYP+ N ++ A+ +GN +++K S G AA A G
Sbjct: 116 -PLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGER----FAAAFAEAG 170
Query: 247 APENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
PE + V+ ET AL++ +D + F GS GR I R A+ V LELGGKD
Sbjct: 171 LPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDP 230
Query: 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364
V D D+ A+ V A +SGQ+C ER YVH IY FV +VK G P
Sbjct: 231 AYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDP 290
Query: 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 424
L +G + ++ ++ + DA+ KGA L G+ + Y PTV+ NV+
Sbjct: 291 LDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGG-AYLAPTVLTNVD 349
Query: 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
H+M++M+EE FGP++ IMK +D E + L NDS YGL +V++ RA + Q++ G
Sbjct: 350 HSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGT 409
Query: 485 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+N +Y+ +L + GVKDSG G G KS
Sbjct: 410 VFMN--RCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 321 bits (825), Expect = e-104
Identities = 166/484 (34%), Positives = 233/484 (48%), Gaps = 57/484 (11%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PAT + P S A+VD VA AR A W K + +R + LR L I + E +
Sbjct: 4 PATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEEL 63
Query: 129 CEISSRDTGKTM--VDASLGEIMTT-------CEKI--TWLLSEGEKWLKPEYRSSGRSM 177
E+ +RD GK + A + + +KI + + K +Y + R
Sbjct: 64 AELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVD-----KGDYLNFTRRE 118
Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFN------PMLAAVFSGNGIVIKVSENASWSG 231
PLGVV AI WN P + P LAA GN +V+K SE+ S
Sbjct: 119 ----------PLGVVAAITPWNSP---LLLLAKKLAPALAA---GNTVVLKPSEHTPAST 162
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
++ + A G P +V+V+TGF ETGEALV V KI F G GR I R A
Sbjct: 163 LELAKLAEEA----GFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA 218
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
++ L PVTLELGGK IV DD D+ V ++GQ C R V R IY F
Sbjct: 219 AENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEF 278
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA---RGSFGH 405
V ++ +++ G PL + MG L EK++ V A ++GA +L R S
Sbjct: 279 VERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGAD 338
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465
L G +F PT++ +V + M++ QEE FGP++ ++ F+ +EE + LANDS YGL +
Sbjct: 339 LGAG---YFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGI 395
Query: 466 FSGSQHRAREIAAQIQCGVAAINDF-ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524
++ RA +A I+ G +N + A + PFGG KDSG GR G+E +R
Sbjct: 396 WTRDLARAHRVARAIEAGTVWVNTYRALSPS---SPFGGFKDSGIGRENGIEAIREYTQT 452
Query: 525 KSVV 528
KSV
Sbjct: 453 KSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 318 bits (816), Expect = e-102
Identities = 148/452 (32%), Positives = 232/452 (51%), Gaps = 13/452 (2%)
Query: 70 EPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129
P T + LG P + A+V+ A+AR AQ+ WA F +R ++E ++ +
Sbjct: 2 APFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELL 61
Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL 189
++ +TGK A E++ + E+ LKP R ++ + V P
Sbjct: 62 DLIQLETGKARRHA-FEEVLDVAIVARYYARRAERLLKPRRRRGAIPVL-TRTTVNRRPK 119
Query: 190 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249
GVVG I WNYP + + A+ +GN +V+K + + + ++ A G P
Sbjct: 120 GVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEA----GLPR 175
Query: 250 NLVDVITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 308
+L V+TG +E G A+V + D ++F GS GR++ A + L +LELGGK+ IV
Sbjct: 176 DLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVL 235
Query: 309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368
+D D+ A AVRA ++GQ C ER YVH +Y FV + +++ G L
Sbjct: 236 EDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYG 295
Query: 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTM 427
DMG+L +++ V+DA+ KGA +LA G + + YF PTV+ V M
Sbjct: 296 PDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR----ARPDLGPYFYEPTVLTGVTEDM 351
Query: 428 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
+L EE FGP++ I + D+E ++LAND+ YGL +V++ R R IAA+++ G +
Sbjct: 352 ELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNV 411
Query: 488 ND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
N+ +A+ + P GG+KDSG GR G EGL
Sbjct: 412 NEGYAAAWASIDAPMGGMKDSGLGRRHGAEGL 443
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 311 bits (798), Expect = 5e-99
Identities = 157/491 (31%), Positives = 238/491 (48%), Gaps = 37/491 (7%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
+ + P T + L P + A+V+ A+AR AQ+ WA + ++R +LL
Sbjct: 27 DGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRER---AAVLL 83
Query: 119 KY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
++ ++E++E + ++ +TGK A E++ + K L P R+
Sbjct: 84 RFHDLVLENREELLDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGAL 142
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
++ K P GVVG I WNYP + + A+ +GN +V+K +
Sbjct: 143 PVL-TKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT----- 196
Query: 236 RIIQAALAAV------GAPENLVDVITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNA 288
ALAAV G P +L V+TG G ALV + D ++F GS GR++ A
Sbjct: 197 -----ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQA 251
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
+ L +LELGGK+ IV DD D+ A AVRA ++GQ C ER YVH IY F
Sbjct: 252 GRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEF 311
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL----ARGSFG 404
V V+++ G DMG+L E + V+DA+ KGA +L AR G
Sbjct: 312 VRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLG 371
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
L ++ PTV+ V M+L +EE FGP++ + +E V+ AND+ YGL +
Sbjct: 372 PL-------FYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNAS 424
Query: 465 VFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523
V++G R R IAA+I+ G +N+ +A+ + P GG+KDSG GR G EGL
Sbjct: 425 VWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTE 484
Query: 524 VKSVVEDRWWP 534
+++ R P
Sbjct: 485 SQTIATQRVLP 495
|
Length = 524 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 307 bits (788), Expect = 9e-99
Identities = 144/458 (31%), Positives = 223/458 (48%), Gaps = 47/458 (10%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
++ + +A A W K+SF +R LR L + E ++ + + + + GK + +A E
Sbjct: 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAE 59
Query: 148 IMTTCEKITWLLS----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203
+ EK W+ E +L E + KA V + PLGVV I+ WN+PF
Sbjct: 60 V----EKCAWICRYYAENAEAFLADEPIETD----AGKAYVRYEPLGVVLGIMPWNFPFW 111
Query: 204 NIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 260
+F P L A GN +++K + N I+ G PE + + +
Sbjct: 112 QVFRFAAPNLMA---GNTVLLKHASNVPGCA----LAIEELFREAGFPEGVFQNL--LID 162
Query: 261 TGEALVSSVDKII---------FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 311
+ + V+ II GS GR + A K L LELGG D FIV DD
Sbjct: 163 SDQ-----VEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDA 217
Query: 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371
D+ + AV+ LQ++GQ+C A+RF VH D+Y F+ + + + ++ G P+ D+
Sbjct: 218 DLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDL 277
Query: 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 431
G L + ++L V +A+ GA +L G GA ++PPTV+ +V M
Sbjct: 278 GPLARKDLRDELHEQVEEAVAAGATLLLGGKR-PDGPGA---FYPPTVLTDVTPGMPAYD 333
Query: 432 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF- 490
EE FGP+ ++K +EE + LANDS +GLG +VF+ RA +A +++ G+ IN
Sbjct: 334 EELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMV 393
Query: 491 ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
S+ LPFGGVK SG+GR G G+R +K+V
Sbjct: 394 KSD---PRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = 1e-94
Identities = 155/478 (32%), Positives = 228/478 (47%), Gaps = 45/478 (9%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+ PAT + L P AEVD VA A++A W++ S +R + L + I + +
Sbjct: 2 FNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADEL 61
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKI-----TWLLSEGEKWLKPEYRSSGRSMIHKKAK 183
+ S DTGK + A +I L +GE Y G ++ +
Sbjct: 62 ALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGE-----SYPQDGGALNY---- 112
Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRI 237
V P+GV G I WN P ML A+ GN +V+K SE + +
Sbjct: 113 VLRQPVGVAGLITPWNLPL------MLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAEL 166
Query: 238 IQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294
A G P +V+V+ GF E G ALV+ VD I F G GR IMR A+ L P
Sbjct: 167 ANEA----GLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKP 222
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
V+LELGGK+ IV D D+ AVR++ ++G+ C R V R IY F+ + +
Sbjct: 223 VSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVE 282
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS---FGHLSEGAV 411
K++ G PL ++G L EH EK+ V A +GA IL G L G
Sbjct: 283 RAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGY- 341
Query: 412 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 471
+ PTVI +++ ++ QEE FGP++ ++ F+ +EE ++LAND+ YGL V++
Sbjct: 342 --FVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG 399
Query: 472 RAREIAAQIQCGVAAINDFASNYMCQSL--PFGGVKDSGFGRFAGVEGLRACCLVKSV 527
RA +A +++ G +N + + + L PFGGVK SG GR G L +K+V
Sbjct: 400 RAHRVARRLEAGTVWVNCW----LVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 294 bits (756), Expect = 9e-94
Identities = 147/469 (31%), Positives = 224/469 (47%), Gaps = 25/469 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKS-SFKQRRQFLRILLKYIIEHQELIC 129
PAT + +G P A+VD +A AR+A S ++R + LR L + + +E +
Sbjct: 4 PATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELR 63
Query: 130 EISSRDTGKTM-------VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA 182
+ + G + VD +G + + E + + GR ++ ++
Sbjct: 64 ALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRRE- 122
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GVV AI WN+PF + A+ +GN +V+K + + S II
Sbjct: 123 -----PVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII---- 173
Query: 243 AAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
A P +V+V+TG GEAL + VD + F GS VGR IM A+ TL V LEL
Sbjct: 174 AETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLEL 233
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GGK A IV DD D+ A AV + ++GQ CA R V R Y V +A +++
Sbjct: 234 GGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEAL 293
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G P MG L ++++ + D+GA ++ G G + Y PT+
Sbjct: 294 PVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGG--GRPAGLDKGFYVEPTL 351
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+V++ M++ QEE FGP++ ++ ++ D+E V++ANDS YGL V+S RA +A +
Sbjct: 352 FADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARR 411
Query: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
I+ G IN PFGG K SG GR G+EGL KS+
Sbjct: 412 IRTGSVGINGGG--GYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 288 bits (740), Expect = 1e-91
Identities = 148/439 (33%), Positives = 211/439 (48%), Gaps = 34/439 (7%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146
+VD A A AQK WA + ++R LR + + E ++ I + R++G T A+
Sbjct: 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-F 59
Query: 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGR---SMIH-KKAKVEFHPLGVVGAIVSWNYPF 202
E+ +L E R G S + K++ V PLGVVG I +N+P
Sbjct: 60 EVGAAIA----ILREAAGLP---RRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPL 112
Query: 203 H---NIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-RIIQAALAAVGAPENLVDVITG- 257
P LA GN +V+K +G I + A G P+ +++V+ G
Sbjct: 113 ILAMRSVAPALAL---GNAVVLKPDSRTPVTGGLLIAEIFEEA----GLPKGVLNVVPGG 165
Query: 258 FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315
+E G+ALV V I F GS VGR I A + L V LELGG + IV DD D+
Sbjct: 166 GSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDL 225
Query: 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 375
A A GQ C A R VH +Y FV ++ K++ G P +G L
Sbjct: 226 AVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLI 285
Query: 376 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 435
+++ +V DA+ GA +L G++ EG + PTV+ +V M + +EE F
Sbjct: 286 NERQVDRVHAIVEDAVAAGARLLTGGTY----EGLF---YQPTVLSDVTPDMPIFREEIF 338
Query: 436 GPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 495
GP+ P++ F+ DEE V+LAND+ YGL AVF+ RA A +++ G+ IND N
Sbjct: 339 GPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDE 398
Query: 496 CQSLPFGGVKDSGFGRFAG 514
PFGGVK SG GRF G
Sbjct: 399 PHV-PFGGVKASGGGRFGG 416
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 288 bits (740), Expect = 3e-91
Identities = 144/449 (32%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
YI S + PAT + + PA + + D V A AQK W + +R
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA 60
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWL 166
+LR L I E+ + + ++ + GKT+ A E+ T + I ++ EGE +
Sbjct: 61 AYLRKLADLIRENADELAKLIVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGE--I 117
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
P R + I K P+GVV I+ WN+PF I + A+ +GN IVIK SE
Sbjct: 118 IPSDRPNENIFIFKV------PIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEE 171
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRM 283
+ + ++ A G P +++++TG + G+ALV+ V I GS G+
Sbjct: 172 TPLNALEFAELVDEA----GLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQK 227
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFY 339
IM A++ +T V+LELGGK IV D D+ +AV+A + S GQ C AER Y
Sbjct: 228 IMEAAAENITKVSLELGGKAPAIVMKDADL----DLAVKAIVDSRIINCGQVCTCAERVY 283
Query: 340 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399
VH DIY F+ ++ + +K+V G P DMG L +K++ +V A++ GA +L
Sbjct: 284 VHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLT 343
Query: 400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
G +G ++ PTV+ NV M+++QEE FGP++P++KF++ +E ++LANDS Y
Sbjct: 344 GGKRPEGEKG---YFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEY 400
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
GL +++ + + A +++ G IN
Sbjct: 401 GLTSYIYTENLNTAMRATNELEFGETYIN 429
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 288 bits (738), Expect = 5e-91
Identities = 151/474 (31%), Positives = 223/474 (47%), Gaps = 38/474 (8%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
EPAT + L +VD V A+ AQK W+ +S +R + LR + E + I
Sbjct: 2 IEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEI 61
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK------- 181
+ + D GK + +A + +I ++ + + EY + + +
Sbjct: 62 ARLETIDNGKPIEEARV-DIDSSADCL-------------EYYAGLAPTLSGEHVPLPGG 107
Query: 182 --AKVEFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
A PLGV I +WNYP P LA GN +V K S +
Sbjct: 108 SFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALAC---GNAMVYKPSPFTPLTALLLAE 164
Query: 237 IIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294
I+ A G P+ + +V+ G ETG+ L V K+ F GS G+ +M A+K +
Sbjct: 165 ILTEA----GLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKH 220
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
VTLELGGK I+ DD D+ + A+ A S GQ C+ R +V R I F ++ +
Sbjct: 221 VTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVE 280
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-Q 413
K + G PL MGAL EH EK+ + A +GA++L G +G +
Sbjct: 281 RTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGF 340
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
Y P V+ + M +++EE FGP+M I+ F+T+EEV++ AND+ YGL VF+ RA
Sbjct: 341 YVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRA 400
Query: 474 REIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+ AQ+Q G IN + N +PFGG K SGFGR G L +K+V
Sbjct: 401 HRVIAQLQAGTCWINTY--NISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 285 bits (731), Expect = 7e-90
Identities = 148/471 (31%), Positives = 225/471 (47%), Gaps = 25/471 (5%)
Query: 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEH 124
PAT + L A A+VD VA AR+A VW++ S +R+ L L I H
Sbjct: 5 ATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAH 64
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
++ + + + D GK + DA ++ + W +K + E +G + A +
Sbjct: 65 RDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDK-VYGEVAPTGPDAL---ALI 120
Query: 185 EFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
PLGVVGA+V WN+P P LAA GN +V+K +E + + R+ + A
Sbjct: 121 TREPLGVVGAVVPWNFPLLMAAWKIAPALAA---GNSVVLKPAEQSPLTA---LRLAELA 174
Query: 242 LAAVGAPENLVDVITGFAET-GEALV--SSVDKIIFVGSPGVGRMIMRNASKT-LTPVTL 297
L A G P +++V+ GF T GEAL VD + F GS VGR + + ++ L V L
Sbjct: 175 LEA-GLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233
Query: 298 ELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
E GGK IV D D+ A+ A + G+ C+ R VH I F+ +V
Sbjct: 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAA 293
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
+ G PL MGAL H +K+ + +GA ++A G G +
Sbjct: 294 REWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETG--GFFVE 351
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PTV V M++ +EE FGP++ ++ F+++EE V LANDS YGL +V++ RA +
Sbjct: 352 PTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRV 411
Query: 477 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
A +++ G +N F + + PFGG K SG GR + L +K+
Sbjct: 412 ARRLRAGTVWVNCFDEGDI--TTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 2e-89
Identities = 140/486 (28%), Positives = 222/486 (45%), Gaps = 24/486 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
++I R P + PAT + +G P + A+VD VA AR+A W + S
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
+R LR L + + + + + + G + + + + + + +
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120
Query: 169 EYRSS---GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
E R G ++ ++ P+GVV AIV WN P + A+ +G +V+K S
Sbjct: 121 ERRPGSGGGHVLVRRE------PVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSP 174
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283
++ A G P +V+V+ E GE LV VDK+ F GS GR
Sbjct: 175 ETPLDAY----LLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRR 230
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
I + L VTLELGGK A IV DD D+ V A+L ++GQ C R V R
Sbjct: 231 IAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRS 290
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
Y V +A V ++ G PL +G L E+++ + +GA ++ G
Sbjct: 291 RYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGR 350
Query: 404 -GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
L G + PT+ +V++ M++ QEE FGP++ ++ ++ +++ V++ANDS YGL
Sbjct: 351 PAGLDRG---WFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLS 407
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522
+V++ R +A +I+ G +N F + PFGG K SG GR G EGL A
Sbjct: 408 GSVWTADVERGLAVARRIRTGTVGVNGF---RLDFGAPFGGFKQSGIGREGGPEGLDAYL 464
Query: 523 LVKSVV 528
KS+
Sbjct: 465 ETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 282 bits (724), Expect = 5e-89
Identities = 150/478 (31%), Positives = 234/478 (48%), Gaps = 44/478 (9%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
++P+T + A+VD V AR+A + W + S +R + L + + I EH +
Sbjct: 2 FDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADE 61
Query: 128 ICEISSRDTGKTMVDASLGEIM----------TTCEKITWLLSEGEKW-LKPEYRSSGRS 176
+ + S DTGK + A ++ +K+ GE L P Y
Sbjct: 62 LARLESLDTGKPLTQAR-ADVEAAARYFEYYGGAADKL-----HGETIPLGPGYFVY--- 112
Query: 177 MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
P GV G I+ WNYP + A+ +GN +V+K +E+A + R
Sbjct: 113 -------TVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTAL---R 162
Query: 237 IIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
+ + A A G P ++V+TG AE G ALV+ VD I F GS G +MR A++ +
Sbjct: 163 LAELAEEA-GLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVV 221
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
PVTLELGGK IV D D+ + V A +Q++GQ C+ R VHR IY + ++
Sbjct: 222 PVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLV 281
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEGAV 411
+ +++ GP L D+G L + ++++ V A +GA I+A G G + G
Sbjct: 282 ERFRALRVGPGLEDP-DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGY- 339
Query: 412 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 471
+ PT++ +V +L QEE FGP++ +M F+ + E + LAN + YGL V++
Sbjct: 340 --FVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGD 397
Query: 472 RAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
RA +A +++ G +N+ A + LPFGGVK SG GR G+E L K+V
Sbjct: 398 RALRVARRLRAGQVFVNNYGAGGGI--ELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 282 bits (725), Expect = 6e-89
Identities = 150/491 (30%), Positives = 226/491 (46%), Gaps = 54/491 (10%)
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILL 118
S PAT + + +VD V AR A + W K ++R + L L
Sbjct: 16 VSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLA 75
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKP 168
I ++ + + S D GK + +++ G++ + +KI
Sbjct: 76 DLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ------------ 123
Query: 169 EYRSSGRSMIHKKAKVEF---HPLGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIK 222
G+++ + + P+GV G I+ WN+P P LAA GN +V+K
Sbjct: 124 -----GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAA---GNTVVLK 175
Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPG 279
+E S + +I+ A G P +V+++ GF T G A+ S VDKI F GS
Sbjct: 176 PAEQTPLSALYLAELIKEA----GFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTA 231
Query: 280 VGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338
VGR IM A+K+ L VTLELGGK IV DD D+ + A + GQ C R
Sbjct: 232 VGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRI 291
Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
+V IY FV + + G P G +K+ + + +GA +L
Sbjct: 292 FVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLL 351
Query: 399 ARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 457
G H S+G YF PTV +V MK+ +EE FGP++ I+KF T++EV++ AND+
Sbjct: 352 TGGE-RHGSKG----YFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDT 406
Query: 458 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG 517
YGL VF+ ++A ++ ++ G +N + N ++PFGG K SGFGR G EG
Sbjct: 407 EYGLAAGVFTKDINKALRVSRALKAGTVWVNTY--NVFDAAVPFGGFKQSGFGRELGEEG 464
Query: 518 LRACCLVKSVV 528
L VK+V
Sbjct: 465 LEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 7e-88
Identities = 149/479 (31%), Positives = 233/479 (48%), Gaps = 28/479 (5%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILL 118
++ P+T + + A +VD+ V ARKA + W+K + ++R + L L
Sbjct: 19 SSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLA 78
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ ++++L+ I + D+GK +LG++ I + +K G+++
Sbjct: 79 DLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADK-------IQGKTIP 131
Query: 179 HKKAKVEF---HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGC 232
K+ + P GV G I+ WNYP P LAA GN +VIK +EN S
Sbjct: 132 TSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAA---GNTVVIKPAENTPLSLL 188
Query: 233 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
++ +++ A G P +V++I G+ A G AL VDKI F GS GR++M+ A+
Sbjct: 189 YFANLVKEA----GFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA 244
Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
+ L VTLE GGK +V +D D+ + A + +SGQNC R YV IY FV
Sbjct: 245 QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFV 304
Query: 350 SQVAKIVKSVSA-GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
+ + VK G P +G +++ + + +GA+ L G
Sbjct: 305 EKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK-LVYGGEKAPEG 363
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
+ PPT+ +V M++++EE FGP++ I KF T EE +K AND+ YGL AVF+
Sbjct: 364 LGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTK 423
Query: 469 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
RA +A +++ G+ IN +SN +PFGG K SG GR G GL K+V
Sbjct: 424 DIRRAHRVARELEAGMVWIN--SSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 279 bits (717), Expect = 9e-88
Identities = 139/491 (28%), Positives = 222/491 (45%), Gaps = 39/491 (7%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
YI P + PAT + +G P + A+VD VA AR+A W+ +S ++R
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEER 60
Query: 111 RQFLRILLKYIIEHQELICEISSRDTG-------KTMVDASLGEIMTTCEKITWLLSEGE 163
L + + + + + + + G V +G + + +
Sbjct: 61 AALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAAD-----ALKDF 115
Query: 164 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
++ + G S++ ++ P+GV G I WN+P + I + A+ +G +V+K
Sbjct: 116 EFEERR----GNSLVVRE------PIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKP 165
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGV 280
SE A S I+ L G P + +++ G GEAL + VD + F GS
Sbjct: 166 SEVAPLSA----IILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRA 221
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G+ + A+ T+ V LELGGK A I+ DD D+ V A +SGQ+C R V
Sbjct: 222 GKRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLV 281
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
R YA A ++ G P +G L +++Q + +++GA ++A
Sbjct: 282 PRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAG 341
Query: 401 GSFGH---LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 457
G G L G + PTV +V M + +EE FGP++ I+ ++ ++E + +AND+
Sbjct: 342 GP-GRPEGLERGY---FVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDT 397
Query: 458 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG 517
YGL V+S RAR +A +++ G IN A N PFGG K SG GR G G
Sbjct: 398 PYGLAGYVWSADPERARAVARRLRAGQVHINGAAFNP---GAPFGGYKQSGNGREWGRYG 454
Query: 518 LRACCLVKSVV 528
L VKS+
Sbjct: 455 LEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 275 bits (704), Expect = 4e-86
Identities = 152/460 (33%), Positives = 225/460 (48%), Gaps = 17/460 (3%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + + S +VD VA AR A + W+ +R + L L + I+ + + +
Sbjct: 4 PATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELAR 63
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ S DTGK + A ++ + + +K G + + + P+G
Sbjct: 64 LESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVRE----PVG 119
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
VVGAIV WN+P + A+ +GN +V+K +E S RI + A G P
Sbjct: 120 VVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA---LRIAELM-AEAGFPAG 175
Query: 251 LVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307
+++V+TGF E G ALV VDKI F GS VGR IM+ A+ L V+LELGGK A IV
Sbjct: 176 VLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIV 235
Query: 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367
D D+ + A + GQ C R VH IY F+ + + +S+ G PL
Sbjct: 236 FADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDP 295
Query: 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 427
K MG L +++ + V+ ++GA +L G GA + PT+ V M
Sbjct: 296 KTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGK----RPGARGFFVEPTIFAAVPPEM 351
Query: 428 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
++ QEE FGP++ +M+F +EE +++AN + YGL V++ RA +AA ++ G I
Sbjct: 352 RIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWI 411
Query: 488 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
N + N PFGG K SGFGR G E L VKSV
Sbjct: 412 NTY--NRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 273 bits (699), Expect = 3e-85
Identities = 155/465 (33%), Positives = 239/465 (51%), Gaps = 40/465 (8%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PA + + P+LSR EV E + A KA+ V + +R + L + + I +E +
Sbjct: 4 RNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEEL 63
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLS-------EGEKWLKPEYRSSGRSMIHKK 181
++ + + GK + S E+ T + L+ GE Y + R +
Sbjct: 64 AKLLTIEVGKPIKQ-SRVEVERTIR--LFKLAAEEAKVLRGETIPVDAYEYNERRIAFTV 120
Query: 182 AKVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 237
P+GVVGAI +N+P H I P +A GN +V+K S N + +I
Sbjct: 121 R----EPIGVVGAITPFNFPANLFAHKI-APAIAV---GNSVVVKPSSNTPLTAIELAKI 172
Query: 238 IQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 294
++ A G P +++V+TG+ G+ +V++ V+ I F GS VG +I A T
Sbjct: 173 LEEA----GLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKK 228
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
V LELGG D IV D D+ IAVR +++GQ C +R V ++Y F+ + +
Sbjct: 229 VALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVE 288
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 414
VK + G PL D+G L E E+++NLVNDA++KG +IL G + +
Sbjct: 289 KVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGG------KRDEGSF 342
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
FPPTV+ N M +M+EE FGP++PI K DEE V++AN + YGL +VF+ +RA
Sbjct: 343 FPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRAL 402
Query: 475 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
++A +++ G IND ++ + +LPFGG K SG GR EG+R
Sbjct: 403 KVARELEAGGVVIND-STRFRWDNLPFGGFKKSGIGR----EGVR 442
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 6e-85
Identities = 140/428 (32%), Positives = 210/428 (49%), Gaps = 15/428 (3%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTG-KTMVDASLGEIMTTCEKITWLLSEGEK 164
S ++RR L L ++++Q+ + E S D G ++ + L EI+ + I +K
Sbjct: 18 SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKK 77
Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224
W+KP R G + KA+VE+ PLGVVG IV WNYP + P++AA+ +GN ++IK S
Sbjct: 78 WMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPS 137
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSV--DKIIFVGSPGVGR 282
E + ++ E+ V V+TG A+ A SS+ D ++F GS VGR
Sbjct: 138 EFTPRTSALLAELLAEYF-----DEDEVAVVTGGADVAAA-FSSLPFDHLLFTGSTAVGR 191
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+MR A++ LTPVTLELGGK I+ D D+ A+ L ++GQ C + V
Sbjct: 192 HVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPE 251
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
D FV+ V + P LA D ++ H +LQ L+ DA KGA ++
Sbjct: 252 DKLEEFVAAAKAAVAKMY--PTLADNPDYTSIINERHYARLQGLLEDARAKGARVI---E 306
Query: 403 FGHLSEGAVD-QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461
E + PPT+++NV M++MQEE FGPI+PI+ +++ +E + N L
Sbjct: 307 LNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPL 366
Query: 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521
F + + + G IND + LPFGGV SG G + G EG
Sbjct: 367 ALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTF 426
Query: 522 CLVKSVVE 529
K V +
Sbjct: 427 SHAKPVFK 434
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 270 bits (693), Expect = 4e-84
Identities = 144/471 (30%), Positives = 221/471 (46%), Gaps = 31/471 (6%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAK-SSFKQRRQFLRILLKYIIEHQEL 127
Y P + +G PALS E+ E A A + W ++R L + E++E
Sbjct: 21 YSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH---KKAKV 184
+ + + GKT+ DA L E+ T + I + E ++ L + G K A+V
Sbjct: 81 VANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKR-LDGDS-LPGDWFPGTKGKIAQV 137
Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
PLGVV AI +NYP + + ++ A+ GN +V K + G A
Sbjct: 138 RREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAE----AFHD 193
Query: 245 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
G P+ +V+V+TG E G+ LV+ +D I F GS VG + + + LELGG
Sbjct: 194 AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPMK--RLVLELGG 251
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
KD IV D D+ A+ V+ AL SGQ C +R VH + V + + V +
Sbjct: 252 KDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKV 311
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
G P D+ L + ++ ++ L++DA+ KGA +L G PT++
Sbjct: 312 GMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGG------GREGGNLIYPTLLD 365
Query: 422 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 481
V M+L EE FGP++PI++ N EE ++LAN S YGL ++F+ ++AR++A ++
Sbjct: 366 PVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALE 425
Query: 482 CGVAAINDFASNYMCQ----SLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
G IN CQ PF G KDSG G + LR+ K +V
Sbjct: 426 VGTVNINS-----KCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIV 471
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 266 bits (682), Expect = 5e-83
Identities = 151/463 (32%), Positives = 221/463 (47%), Gaps = 55/463 (11%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM------ 140
+ D+ V A A W+K+ +RR L + ++ E +TG T
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200
VD + G + IT ++ P + +M+ K+ P+GVV I WN
Sbjct: 61 VDLAAGMLREAASLITQIIGG----SIPSDKPGTLAMVVKE------PVGVVLGIAPWNA 110
Query: 201 PFH----NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256
P I P LAA GN +V+K SE + + I + A G P+ +++V+T
Sbjct: 111 PVILGTRAIAYP-LAA---GNTVVLKASELSP--RTHWL-IGRVFHEA-GLPKGVLNVVT 162
Query: 257 GFAETG----EALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310
E EAL++ V K+ F GS VGR+I A+K L PV LELGGK IV +D
Sbjct: 163 HSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK-Y 369
D+ A A+ A +SGQ C ER VH I FV ++ + + AGP + G
Sbjct: 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLV 282
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
A +++++ LV+DAL KGA+++ G G E PPT++ NV M +
Sbjct: 283 SAAA------ADRVKELVDDALSKGAKLVV-G--GLADESPSGTSMPPTILDNVTPDMDI 333
Query: 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN- 488
EE+FGP++ I++ +EE V++ANDS YGL AVF+ RA +A +I+ G IN
Sbjct: 334 YSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHING 393
Query: 489 ----DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
D +LP GGVK SG+GRF G G+ K +
Sbjct: 394 MTVHDEP------TLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 266 bits (682), Expect = 2e-82
Identities = 149/508 (29%), Positives = 232/508 (45%), Gaps = 44/508 (8%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQ 109
YI S PA + + P + + +A AR+A W ++
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 110 RRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS--LGEIMTTCEKITWLLSE--GEKW 165
R L + I E E + + + +TGKT+ ++ + ++ L ++ GE +
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVY 120
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIK 222
P H ++ P+GV G I WNYP P LAA GN +VIK
Sbjct: 121 DVPP---------HVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAA---GNTVVIK 168
Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPG 279
SE + F +I G P +V+++TG T G L S VD + F G
Sbjct: 169 PSEVTPLTTIALFELI----EEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTA 224
Query: 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFY 339
GR IMR A+ + V LELGGK+ IV D D A+ ++GQ C+ R
Sbjct: 225 TGRSIMRAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLL 284
Query: 340 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399
V I+ FV+ +A+ K + G L +MG L EH EK+ + + ++GA ++
Sbjct: 285 VEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVC 344
Query: 400 ---RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
R + L++G + PT+ +V+ TM+++QEE FGP++ + +F+T+EE ++LAND
Sbjct: 345 GGKRPTGDELAKGY---FVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLAND 401
Query: 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVE 516
+ YGL AV++ RA +A +++ G IND+ + P+GG K SG GR G
Sbjct: 402 TPYGLAGAVWTKDIARANRVARRLRAGTVWINDY--HPYFAEAPWGGYKQSGIGRELGPT 459
Query: 517 GLRACCLVKSVVEDRWWPYIKTKIPKPI 544
GL K + I P+PI
Sbjct: 460 GLEEYQETKHI-------NINLS-PQPI 479
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 264 bits (677), Expect = 4e-82
Identities = 144/464 (31%), Positives = 227/464 (48%), Gaps = 22/464 (4%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + L PA S A+VD VA AR A W ++ +R + LR L + EH E +
Sbjct: 4 PATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELAL 63
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITW---LLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
I + D G + A LG++M + + L++E LK E G +H +
Sbjct: 64 IDALDCGNPVS-AMLGDVMVAAALLDYFAGLVTE----LKGETIPVGGRNLHYTLR---E 115
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P GVV IV++N+P + A + +GN +V+K E A S + + L
Sbjct: 116 PYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVL----- 170
Query: 248 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
P + +++ G A G ALV V +I +GS GR IMR A++ + VTLELGGK+A
Sbjct: 171 PPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNA 230
Query: 305 FIVCDDVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
IV D D A AV GQ+C R +VH IY +++V + V ++ G
Sbjct: 231 LIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGD 290
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 423
P MG L + +++ + ++ A +GA ++ G Y PTV +V
Sbjct: 291 PTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADV 350
Query: 424 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 483
M++ +EE FGP++ ++++ + E+V AN YGL A+++ +A A +++ G
Sbjct: 351 TPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAG 410
Query: 484 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
IN + +++ PFGGVK+SG GR +E L + K+V
Sbjct: 411 YVWINGSSRHFL--GAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 265 bits (680), Expect = 4e-82
Identities = 145/464 (31%), Positives = 235/464 (50%), Gaps = 35/464 (7%)
Query: 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126
Y PAT + + P + RAE ++ +A A A W+K + +R + LR II ++E
Sbjct: 43 PVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKE 102
Query: 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGRSMIHKKAK 183
+ ++ + + GK + +A +GE+ + + E ++ + P R ++ K+
Sbjct: 103 DLAQLMTLEQGKPLKEA-IGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQ-- 159
Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GVVGAI WN+P I + A+ +G +V+K SE + ALA
Sbjct: 160 ----PVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLT----------ALA 205
Query: 244 A------VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 294
A G P +++V+ G A E G+AL++S V KI F GS VG+ +M A+ T+
Sbjct: 206 AAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKR 265
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
V+LELGG FIV DD D+ + A+ + ++SGQ C A R V IY F +K
Sbjct: 266 VSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSK 325
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 414
V+ + G G L +K+++ V DA+ KGA++L G S G +
Sbjct: 326 AVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGK--RHSLGGT--F 381
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
+ PTV+ +V M + +EE FGP+ P+ +F T+EE + +AND+ GL +F+ RA
Sbjct: 382 YEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAW 441
Query: 475 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
++ ++ G+ +N+ + + PFGGVK SG GR G+
Sbjct: 442 RVSEALEYGIVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGI 483
|
Length = 498 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 262 bits (673), Expect = 1e-81
Identities = 139/434 (32%), Positives = 219/434 (50%), Gaps = 13/434 (2%)
Query: 90 ERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148
RV A++A S+ +R L+ L K I+ +E I + D K + L EI
Sbjct: 1 RRVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEI 60
Query: 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208
+ +I + +KW+KP+ + + K+K+ + P GV I WNYPF+ F P
Sbjct: 61 LPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGP 120
Query: 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS- 267
+++A+ +GN ++K SE + +II+ A E+ V V G AE +AL+
Sbjct: 121 LVSAIAAGNTAILKPSELTPHTSAVIAKIIREAF-----DEDEVAVFEGDAEVAQALLEL 175
Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
D I F GSP VG+++M A+K L VTLELGGK IV + D+ A+ +
Sbjct: 176 PFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235
Query: 328 SGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
+GQ C + +VH + FV + A+I K D+ + H ++L+ L
Sbjct: 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGL 295
Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446
++DA+ KGA++ G F A +Y PTV+ NV MK+MQEE FGP++PI+ +
Sbjct: 296 LDDAVAKGAKVEFGGQFD-----AAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYED 350
Query: 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKD 506
+EV++ N L VFS + ++ A+ G +ND +++ +LPFGGV +
Sbjct: 351 LDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNN 410
Query: 507 SGFGRFAGVEGLRA 520
SG G + GV G +A
Sbjct: 411 SGIGSYHGVYGFKA 424
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 263 bits (673), Expect = 3e-81
Identities = 141/480 (29%), Positives = 227/480 (47%), Gaps = 26/480 (5%)
Query: 52 YIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
YI S PA + +G FP + ++VD V AR+A W K +R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
++L + + + +E + + +R+ GK + + G++ + + EG + L E
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEGRR-LFGET 119
Query: 171 RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 230
S + +K A P+GVV I WN+P + A+ GN +V K +E+
Sbjct: 120 VPS--ELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPAC 177
Query: 231 GCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALV--SSVDKIIFVGSPGVGRMIMRN 287
++++ A G P +V+V+ G E GEALV VD + F GS VG I
Sbjct: 178 A---LKLVEL-FAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGET 233
Query: 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS----GQNCAGAERFYVHRD 343
++ V LE+GGK+ IV DD D+ +A+ AL S+ GQ C R VH
Sbjct: 234 CARPNKRVALEMGGKNPIIVMDDADL----DLALEGALWSAFGTTGQRCTATSRLIVHES 289
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
+Y F+ + + K + G L + DMG L EK+ N ++GA +L G
Sbjct: 290 VYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGG-- 347
Query: 404 GHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461
L+ G ++ + PTV +V M++ QEE FGP++ +++ ++ EE +++AND+ YGL
Sbjct: 348 ERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGL 407
Query: 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRA 520
A+++ ++A ++ G+ +N LPFGGVK SG G R AG L A
Sbjct: 408 SSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVH-LPFGGVKKSGNGHREAGTTALDA 466
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 261 bits (670), Expect = 5e-81
Identities = 152/474 (32%), Positives = 232/474 (48%), Gaps = 36/474 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT +G PA + +VD V AR+A W K++ +R ++LR + + + E +E + E
Sbjct: 4 PATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAE 63
Query: 131 ISSRDTGKTMVDAS--LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK----KAKV 184
+ +RD GK + +A+ + ++ E L+E + R++ KA+V
Sbjct: 64 LEARDNGKPLDEAAWDVDDVAGCFEYYA-DLAEQLD------AKAERAVPLPSEDFKARV 116
Query: 185 EFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
P+GVVG I WN+P P LAA G +V+K SE S + I
Sbjct: 117 RREPVGVVGLITPWNFPLLMAAWKVAPALAA---GCTVVLKPSELTSLTELELAEIA--- 170
Query: 242 LAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
A G P +++V+TG E G L + +DKI F GS G +M+ A++ + PV+LE
Sbjct: 171 -AEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLE 229
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV DD D+ + A+ ++GQ C+ R VH I F+ ++A ++
Sbjct: 230 LGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEA 289
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYF-P 416
+ G PL +G L EK+ + + ++GA +L G HL +G YF
Sbjct: 290 IRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKG----YFIA 345
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PTV +V ++ +EE FGP++ + F T++E + LANDS YGL AV S R +
Sbjct: 346 PTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRV 405
Query: 477 AAQIQCGVAAINDFASN-YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 529
A ++ G+ IN S Q P+GG K SG GR G GL VK +
Sbjct: 406 AEALEAGIVWIN--CSQPCFPQ-APWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 261 bits (669), Expect = 9e-81
Identities = 136/451 (30%), Positives = 212/451 (47%), Gaps = 13/451 (2%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA + + A + +V+ +A AR+AQ WA S +R + LR I E E + +
Sbjct: 20 PANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERGRILRRAADLIRERNEELAK 79
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ + DTGKT+ + + ++ + + + L E G A PLG
Sbjct: 80 LETLDTGKTLQETIVADMDSGADVFEFFAGLAPA-LNGEIIPLG---GPSFAYTIREPLG 135
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
V I +WNYP + A+ +GN +V K SEN + I++ A G P+
Sbjct: 136 VCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEA----GLPKG 191
Query: 251 LVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307
+ +V+ G AE G LV+ V K+ F G G+ IM A+ L VT+ELGGK IV
Sbjct: 192 VFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMELGGKSPLIV 251
Query: 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367
DD D+ A+ S+GQ C+ R +VH+ I F++++ + + + G P
Sbjct: 252 FDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTERIKLGDPFDE 311
Query: 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 427
+MG L H +K+ + + +GA + G + PTV + M
Sbjct: 312 ATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDM 371
Query: 428 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
+++EE FGP+M ++ F+ ++EV+ AND+ YGL VF+ RA +A Q++ G I
Sbjct: 372 TIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVADQLEAGTVWI 431
Query: 488 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
N + N PFGG K SG GR G L
Sbjct: 432 NTY--NLYPAEAPFGGYKQSGIGRENGKAAL 460
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 261 bits (668), Expect = 9e-81
Identities = 139/474 (29%), Positives = 212/474 (44%), Gaps = 39/474 (8%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PA SR + + +A A A WA ++ +R + L + + + +
Sbjct: 4 LNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDL 63
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGR----SMIHKK 181
++ + G T A E T E LL ++ E S SM +
Sbjct: 64 IDLLIDEGGSTYGKA-WFETTFTPE----LLRAAAGECRRVRGETLPSDSPGTVSMSVR- 117
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
PLGVV I +NYP + A+ +GN +V+K SE G I++ A
Sbjct: 118 -----RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEA 172
Query: 242 LAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
G P+ + +V+TG AE G+ LV V + F GS VGR I A + L +TLE
Sbjct: 173 ----GLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLE 228
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK+ IV D D+ + + A A GQ C A R V +Y FV +
Sbjct: 229 LGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASK 288
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
+ G P +G L E+++ V DA+ KGA++L G +G ++ PT
Sbjct: 289 LKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK----YDGN---FYQPT 341
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
V+ +V M++ +EE FGP+ ++ EE ++LAND+ YGL A+ + RA ++A
Sbjct: 342 VLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAE 401
Query: 479 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 532
+++ G+ IND + +PFGGVK SGFGR G + E +W
Sbjct: 402 RLESGMVHIND-PTILDEAHVPFGGVKASGFGREGGEWSME------EFTELKW 448
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 260 bits (667), Expect = 1e-80
Identities = 141/477 (29%), Positives = 219/477 (45%), Gaps = 48/477 (10%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+PAT + + P S A+VD VA A A W +++ +R + L L I E+ E +
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEEL 61
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRSSGRSMIH 179
+ SR+TGK + E+ + + + GE Y SMI
Sbjct: 62 AALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGE------YLPGHTSMIR 115
Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
++ P+GVV I WNYP P LAA GN +V+K SE +
Sbjct: 116 RE------PIGVVAQIAPWNYPLMMAAWKIAPALAA---GNTVVLKPSETTPLTT----- 161
Query: 237 IIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293
++ A LAA P +V+V+ G G+ALV+ V + GS G+ + R A+ TL
Sbjct: 162 LLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLK 221
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
V LELGGK IV DD D+ A ++GQ+C A R YVH +Y FV+ +
Sbjct: 222 RVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALV 281
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
+ V ++ G P +MG L E++ V + A +L G
Sbjct: 282 EAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGR----RAEGPGY 336
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
++ PTV+ V +++QEE FGP++ + F+ ++E ++LAND YGL +V++ RA
Sbjct: 337 FYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRA 396
Query: 474 REIAAQIQCGVAAIND---FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
++A++ G +N A+ +P GG K SG+G+ + L +K V
Sbjct: 397 MRLSARLDFGTVWVNTHIPLAAE-----MPHGGFKQSGYGKDLSIYALEDYTRIKHV 448
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 2e-80
Identities = 95/275 (34%), Positives = 137/275 (49%), Gaps = 11/275 (4%)
Query: 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
AR A K WA +R LR + + E +E + + + +TGK + +LGE+ +
Sbjct: 3 ARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE-EALGEVARAIDT 61
Query: 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF 214
+ +K PE S +A V PLGVVG I WN+P + A+
Sbjct: 62 FRYAAGLADKLGGPELPSPDP---GGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALA 118
Query: 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDK 271
+GN +V+K SE + ++Q A G P +V+V+ G E G AL+S VDK
Sbjct: 119 AGNTVVLKPSELTPLTALALAELLQEA----GLPPGVVNVVPGGGDEVGAALLSHPRVDK 174
Query: 272 IIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQN 331
I F GS VG+ IM+ A++ L PVTLELGGK IV +D D+ + AV A ++GQ
Sbjct: 175 ISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQI 234
Query: 332 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
C A R VH IY FV ++ ++ V P+A
Sbjct: 235 CTAASRLLVHESIYDEFVEKLVTVLVDVDPDMPIA 269
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 6e-80
Identities = 145/475 (30%), Positives = 218/475 (45%), Gaps = 33/475 (6%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I P Y P K L P + +VD V A +A K W K+S +R
Sbjct: 4 FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA 63
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS--EGEKWLKPE 169
L + I E+ EL+ + D GK + + +I + + +
Sbjct: 64 NILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQ------ 117
Query: 170 YRSSGRSMIHKKA-KVEFH-PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVS 224
S I + FH PLGVVG I+ WN+P P LAA GN +V+K +
Sbjct: 118 --EGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAA---GNTVVLKPA 172
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVG 281
S +I L P+ +V+V+TGF +E G+ L S + K+ F GS VG
Sbjct: 173 SQTPLSILVLMELIGDLL-----PKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVG 227
Query: 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV-----AQIAVRAALQSSGQNCAGAE 336
R+IM+ A++ L PVTLELGGK I DD A+ + G+ C
Sbjct: 228 RLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPS 287
Query: 337 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE 396
R V IY F+ + + +++ G PL + MGA + EK+ + V+ ++GAE
Sbjct: 288 RALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAE 347
Query: 397 ILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
+L G L ++ PT+I N+ M++ QEE FGP++ ++ F +EE + +AND
Sbjct: 348 VLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIAND 407
Query: 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 511
+ YGLG V++ +RA +A IQ G +N + + PFGG K SG GR
Sbjct: 408 TEYGLGGGVWTRDINRALRVARGIQTGRVWVNCY--HQYPAHAPFGGYKKSGIGR 460
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 258 bits (661), Expect = 1e-79
Identities = 153/456 (33%), Positives = 239/456 (52%), Gaps = 28/456 (6%)
Query: 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125
+ Y PA + L + A+VD V A++A K W K++ +R L + I E++
Sbjct: 18 IDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENK 77
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS--EGEKWLKPEYRSSGRSMIHKKAK 183
EL+ + + D GK + + +I + + E+ S++ ++
Sbjct: 78 ELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLRE-- 135
Query: 184 VEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
P+GVVG I+ WN+PF P LAA GN +VIK S S S +IIQ
Sbjct: 136 ----PIGVVGQIIPWNFPFLMAAWKLAPALAA---GNTVVIKPSSTTSLSLLELAKIIQD 188
Query: 241 ALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
L P+ +V+++TG +++GE L++ +DK+ F GS VGR + A+K L P TL
Sbjct: 189 VL-----PKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATL 243
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGGK A I+ DD + + A L + GQ C R +V IY FV+++ + +
Sbjct: 244 ELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFE 303
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YF 415
+V G PL MGA + +K+ + V+ A ++GA+IL G L+E +D+ +
Sbjct: 304 NVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGG--HRLTENGLDKGFFI 361
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PT+IVNV + M++ QEE FGP+ ++KF T++EV+ +ANDS YGLG VF+ +RA
Sbjct: 362 EPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALR 421
Query: 476 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 511
+A ++ G +N + N + PFGG K SG GR
Sbjct: 422 VARAVETGRVWVNTY--NQIPAGAPFGGYKKSGIGR 455
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 2e-78
Identities = 134/442 (30%), Positives = 208/442 (47%), Gaps = 17/442 (3%)
Query: 89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148
E VA+ R+ S + R+ L+ L + + E++E I D GK +A L EI
Sbjct: 1 AELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEI 60
Query: 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208
+I L +KW+KP S + KA V PLGVV I WNYP P
Sbjct: 61 AVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAP 120
Query: 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS- 267
++ A+ +GN +V+K SE A + ++I V V+ G E AL++
Sbjct: 121 LIGAIAAGNTVVLKPSELAPATSALLAKLIPKYF-----DPEAVAVVEGGVEVATALLAE 175
Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
D I F GSP VG+++M A+K LTPVTLELGGK IV D ++ A+ +
Sbjct: 176 PFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
+GQ C + VH I + ++ K +K P D G + H ++L +L+
Sbjct: 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESP-DYGRIINERHFDRLASLL 294
Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
+D +++ G ++Y PT++ +V+ LMQEE FGPI+PI+ ++
Sbjct: 295 DDG-----KVVIGGQVD-----KEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDL 344
Query: 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDS 507
+E ++ N L +FS + + A+ G +ND + +LPFGGV +S
Sbjct: 345 DEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNS 404
Query: 508 GFGRFAGVEGLRACCLVKSVVE 529
G G + G G +KSV++
Sbjct: 405 GMGAYHGKAGFDTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 4e-78
Identities = 143/464 (30%), Positives = 223/464 (48%), Gaps = 41/464 (8%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
P + +G P S +V++ +A A++ K +R + L + + E +E
Sbjct: 4 ISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEF 63
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE------YRSSGRSMIHKKA 182
+ + GK + DA E+ E + L +E K L E +
Sbjct: 64 ARTIALEAGKPIKDA-RKEVDRAIETLR-LSAEEAKRLAGETIPFDASPGGEGRIGFTIR 121
Query: 183 KVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
+ P+GVV AI +N+P H + P +AA GN +V+K + S ++
Sbjct: 122 E----PIGVVAAITPFNFPLNLVAHKV-GPAIAA---GNAVVLKPASQTPLSALKLAELL 173
Query: 239 QAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
A G P+ ++V+TG ET G+ALV+ V I F GSP VG I R A L V
Sbjct: 174 LEA----GLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKV 227
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
TLELG A IV D D+ + V A ++GQ C +R +VH DIY F+ +
Sbjct: 228 TLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAA 287
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
K + G PL D+G + +E+++ V +A++ GA +L G +GA+
Sbjct: 288 TKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLT----GGKRDGAI---L 340
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PTV+ +V MK++ EE F P++ + F+T +E + +ANDS YGL VF+ +A +
Sbjct: 341 EPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALK 400
Query: 476 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
A +++ G IND +S + +P+GGVK+SG GR EG R
Sbjct: 401 AARELEVGGVMIND-SSTFRVDHMPYGGVKESGTGR----EGPR 439
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 6e-78
Identities = 150/461 (32%), Positives = 228/461 (49%), Gaps = 20/461 (4%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
R SE + P T + L PA S+ +VDE A AQK WA + ++R + L
Sbjct: 4 RDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKA 63
Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM 177
+ + E ++ I E R++G T + A++ E + L+ E R +
Sbjct: 64 AQILEERRDEIVEWLIRESGSTRIKANI-EWGAA---MAITREAATFPLRMEGRILPSDV 119
Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-R 236
K+ +V PLGVVG I WN+P H + A+ GN +V+K + + +G +
Sbjct: 120 PGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAK 179
Query: 237 IIQAALAAVGAPENLVDVITG-FAETGEALVSS-VDKII-FVGSPGVGRMIMRNASKTLT 293
I + A G P+ +++V+ G +E G+A V V ++I F GS VGR I A + L
Sbjct: 180 IFEEA----GLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLK 235
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
V LELGG + F+V +D D+ AV GQ C R VH D+Y FV +
Sbjct: 236 KVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFV 295
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
+ VK++ G P +G L + L + + A+++GA +L G A
Sbjct: 296 ERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEGN 348
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
PTV+ +V + M++ +EE FGP+ PI+K + +EE ++LAND+ YGL AVF+ R
Sbjct: 349 VLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERG 408
Query: 474 REIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
+ A +I G+ IND N +PFGG K+SG GRF G
Sbjct: 409 VQFARRIDAGMTHINDQPVNDE-PHVPFGGEKNSGLGRFNG 448
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 1e-77
Identities = 161/480 (33%), Positives = 241/480 (50%), Gaps = 33/480 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFLRILLKYIIEHQ 125
PAT + +G PA + +VD V ARKA K WA+++ R ++LR + I E +
Sbjct: 30 PATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERK 89
Query: 126 ELICEISSRDTGKTMVDASLGEI--MTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKK 181
+ ++ + D GK +D + ++ + C + L+E + + S M K
Sbjct: 90 SELAKLETLDCGKP-LDEAAWDMDDVAGCFEYYADLAEALD----AKQKAPVSLPMETFK 144
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
V PLGVVG I WNYP + A+ +G V+K SE AS + C A
Sbjct: 145 GYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVT-CLEL----AD 199
Query: 242 LAA-VGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
+ VG P +++V+TG E G L S VDKI F GS GR IM A++ + PV+L
Sbjct: 200 ICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSL 259
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGGK IV DDVD+ + A+ ++GQ C+ R VH I + F+ ++ K K
Sbjct: 260 ELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAK 319
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFP 416
++ PL +G + EK+ ++ A +GA IL G HL +G +
Sbjct: 320 NIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGF---FIE 376
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PT+I +V +M++ +EE FGP++ + F+T++E ++LANDS YGL AV S R +
Sbjct: 377 PTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERV 436
Query: 477 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDRW 532
+ Q G+ IN + CQ P+GG+K SGFGR G GL VK V ++ W
Sbjct: 437 SEAFQAGIVWIN-CSQPCFCQ-APWGGIKRSGFGRELGEWGLENYLSVKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 253 bits (647), Expect = 2e-77
Identities = 138/470 (29%), Positives = 216/470 (45%), Gaps = 27/470 (5%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ 125
PAT + + +A+VD+ V AR A K W +R + L L I +
Sbjct: 27 INPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDR 86
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE 185
+ + + D GK + L ++ + + + +K G + + +
Sbjct: 87 AYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHE-- 144
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GV G I+ WN+P P LA GN +V+K +E + + +I+ A
Sbjct: 145 --PVGVCGQIIPWNFPLLMAAWKLAPALAC---GNTVVLKPAEQTPLTALYLASLIKEA- 198
Query: 243 AAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLE 298
G P +V+V+ G+ T A +SS +DK+ F GS VG++I + A K+ L VTLE
Sbjct: 199 ---GFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLE 255
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV D D+ + + A A + GQ C R +V IY FV + + K
Sbjct: 256 LGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKK 315
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
G P K + G E +K+ L+ +GA++ G G + PT
Sbjct: 316 RVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGK----RHGDKGYFIQPT 371
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
V +V M++ +EE FGP+ I KF T +EV++ AN++ YGL AVF+ +A +
Sbjct: 372 VFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSN 431
Query: 479 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
++ G +N + + Q+ PFGG K SG GR G GL+ VK+V
Sbjct: 432 ALRAGTVWVNCY-NVVSPQA-PFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 250 bits (641), Expect = 6e-77
Identities = 149/459 (32%), Positives = 234/459 (50%), Gaps = 28/459 (6%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
Y PAT + +G P E + + A +A K W ++ K+R LR ++E+++ +
Sbjct: 2 YNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDDL 61
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKV 184
+ + + GK + +A GEI+ + W E + R G ++ K+ V
Sbjct: 62 ARLITLENGKPLKEAK-GEILYAASFLEWFAEEAK-------RVYGDTIPSPQSDKRLIV 113
Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
P+GV AI WN+P I AA+ +G +V+K +E S R+ + A
Sbjct: 114 IKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA--- 170
Query: 245 VGAPENLVDVITGFA--ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
G P+ +++VITG E G L +S V KI F GS VG+++M+ ++ T+ V++ELG
Sbjct: 171 -GIPKGVLNVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELG 229
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
G FIV DD D+ + A+ + +++GQ C A R YVH IY F ++A+ VK +
Sbjct: 230 GNAPFIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLK 289
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
G L G L + EK++ + DA++KGA+++ G H G +F PTV+
Sbjct: 290 VGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKR-HELGG---NFFEPTVL 345
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
NV M + +EE FGP+ P+ KF+ +EEV+ +AND+ GL FS R +A +
Sbjct: 346 SNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEAL 405
Query: 481 QCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
+ G+ IN SN + PFGGVK SG GR G+
Sbjct: 406 EYGMVGINTGLISNVVA---PFGGVKQSGLGREGSKYGI 441
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 248 bits (636), Expect = 4e-76
Identities = 138/436 (31%), Positives = 211/436 (48%), Gaps = 23/436 (5%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
A+VD A+A AQ+ WA + ++R LR + EH + I + R++G A
Sbjct: 11 DAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKA 70
Query: 144 --SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201
+G + + L ++ + + P + GR + ++ PLGVVG I +N+P
Sbjct: 71 GFEVGAAIGELHEAAGLPTQPQGEILPS--APGRLSLARRV-----PLGVVGVISPFNFP 123
Query: 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 261
+ A+ GN +V+K SG +I G P ++ V+ G A+
Sbjct: 124 LILAMRSVAPALALGNAVVLKPDPRTPVSGGV---VIARLFEEAGLPAGVLHVLPGGADA 180
Query: 262 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
GEALV V I F GS VGR + A + L V+LELGGK+A IV DD D+ A
Sbjct: 181 GEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASN 240
Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379
A GQ C A R VH + + +++A K + G P G+ +G L
Sbjct: 241 GAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQ 300
Query: 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439
+++ +V+D++ GA + A G++ +G ++ PTV+ V M EE FGP+
Sbjct: 301 LDRVHAIVDDSVAAGARLEAGGTY----DG---LFYRPTVLSGVKPGMPAFDEEIFGPVA 353
Query: 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 499
P+ F++DEE V LAND+ YGL + S RA +A +++ G+ IND N +
Sbjct: 354 PVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHN- 412
Query: 500 PFGGVKDSGFG-RFAG 514
PFGG+ SG G RF G
Sbjct: 413 PFGGMGASGNGSRFGG 428
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 1e-75
Identities = 147/466 (31%), Positives = 224/466 (48%), Gaps = 40/466 (8%)
Query: 70 EPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129
PAT + +G P A+VD VA A+ A WA + ++R + L + + E +
Sbjct: 3 NPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELA 62
Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITW---LLSEGEKWLKPEYRSSGRSMIHKKAKVEF 186
+ + +TG + + E + + L E LK E G ++ +
Sbjct: 63 RLLALETGNALRTQARPEAAVLADLFRYFGGLAGE----LKGETLPFGPDVLTYTVRE-- 116
Query: 187 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246
PLGVVGAI+ WN P + A+ +GN +V+K +E+A + I+ L
Sbjct: 117 -PLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVL---- 171
Query: 247 APENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303
P +++VITG+ E G ALV VDK+ F GS VG++I R A+ L PV+LELGGK
Sbjct: 172 -PAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKS 230
Query: 304 AFIVCDDVDVPHVAQIAV---RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
IV D D+ A+ R Q GQ+C R +VH DIY F+ ++ + +
Sbjct: 231 PMIVFPDADLDDAVDGAIAGMRFTRQ--GQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLK 288
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-----KGAEILARGSF---GHLSEGAVD 412
G PL D+GA+ SEK V +D GA +L G G L++G
Sbjct: 289 IGDPLDEATDIGAII----SEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGF-- 342
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
+ PT+ V++ +L +EE FGP++ + + ++EV+ +ANDS YGL V++ R
Sbjct: 343 -FVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGR 401
Query: 473 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
A A ++ G +N QS +GG K SG GR A +EG+
Sbjct: 402 ALRAAHALEAGWVQVNQGGGQQPGQS--YGGFKQSGLGREASLEGM 445
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 244 bits (625), Expect = 3e-74
Identities = 141/489 (28%), Positives = 225/489 (46%), Gaps = 56/489 (11%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
K Y PAT + L S A+VD VA A A W++++ K+R + L L I
Sbjct: 15 EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAI 74
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRS 172
E+ + + S + GK + A EI + + + GE Y
Sbjct: 75 EENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGE------YLE 128
Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSEN 226
SMI + P+GVV +I WNYP M+A A+ +GN +V+K SE
Sbjct: 129 GHTSMIRRD------PVGVVASIAPWNYPL------MMAAWKLAPALAAGNTVVLKPSEI 176
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRM 283
+ A LAA P +++V+TG A G+ALV V + GS G+
Sbjct: 177 TPLT-ALKL----AELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKH 231
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
++ A+ ++ LELGGK IV DD D+ V + ++GQ+C A R Y R
Sbjct: 232 VLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRG 291
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS 402
IY V+++A V ++ G P ++G L H +++ V A G ++ G
Sbjct: 292 IYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGE 351
Query: 403 FGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459
A D Y+ PT++ +++Q E FGP++ + F+ +++ V+ ANDS Y
Sbjct: 352 -------APDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDY 404
Query: 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS-LPFGGVKDSGFGRFAGVEGL 518
GL +V++ RA ++A++Q G +N ++M S +P GG K SG+G+ + GL
Sbjct: 405 GLASSVWTRDVGRAHRVSARLQYGCTWVNT---HFMLVSEMPHGGQKQSGYGKDMSLYGL 461
Query: 519 RACCLVKSV 527
+V+ V
Sbjct: 462 EDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 244 bits (625), Expect = 4e-74
Identities = 145/473 (30%), Positives = 227/473 (47%), Gaps = 40/473 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK---YIIEHQEL 127
PAT + L A + A+V+ VA A++ QK+WA + +R RIL + + E +
Sbjct: 29 PATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERS---RILRRAVDILRERNDE 85
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKA 182
+ + + DTGK + + S+ +I+T + + + EGE + G S ++ +
Sbjct: 86 LAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGE-----QIPLRGGSFVYTRR 140
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIF----NPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
+ PLGV I +WNYP I P LAA GN ++ K SE + I
Sbjct: 141 E----PLGVCAGIGAWNYPIQ-IACWKSAPALAA---GNAMIFKPSEVTPLTALKLAEIY 192
Query: 239 QAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 296
A G P+ + +V+ G G L + K+ F G G+ +M A+ +L VT
Sbjct: 193 TEA----GLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVT 248
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
+ELGGK IV DD D+ A IA+ A SSGQ C R +V + I A F +++ + V
Sbjct: 249 MELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERV 308
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--Y 414
+ + G P+ + G L H +K+ + +GA +L G L+EG +
Sbjct: 309 ERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGG--ERLTEGGFANGAF 366
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
PTV + M +++EE FGP+M ++ F+ ++EV+ AND+ YGL VF+ RA
Sbjct: 367 VAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAH 426
Query: 475 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+ Q++ G+ IN +P GG K SG GR G+ L +KSV
Sbjct: 427 RVIHQLEAGICWIN--TWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 7e-74
Identities = 128/486 (26%), Positives = 211/486 (43%), Gaps = 51/486 (10%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
PA + + S +V+ VA AR+A K W K +R + +R +
Sbjct: 8 VGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIG 67
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGR 175
+ + + +E + + S + GK + + LGE+ + C+ L R
Sbjct: 68 EALRKKKEALGRLVSLEMGKILPEG-LGEVQEMIDICDYAVGL---------------SR 111
Query: 176 SM----IH-----KKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVS 224
+ I + +++PLGVVG I ++N+P + N +A V GN +V K S
Sbjct: 112 MLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPV-AVPGWNAAIALV-CGNTVVWKPS 169
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGR 282
E + +I+ L G P +V+++TG + GE LV V + F GS VGR
Sbjct: 170 ETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGR 229
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS----GQNCAGAERF 338
+ ++ V LELGG +A IV DD D+ +AVRA L ++ GQ C R
Sbjct: 230 RVGETVARRFGRVLLELGGNNAIIVMDDADL----DLAVRAVLFAAVGTAGQRCTTTRRL 285
Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
VH +Y F+ ++ K K V G PL +G L ++ +A++
Sbjct: 286 IVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPL----INQAAVEKYLNAIEIAKSQG 341
Query: 399 ARGSFG-HLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
G +G + PT++ V +++QEE F PI+ ++KF++ EE + + ND
Sbjct: 342 GTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINND 401
Query: 457 SRYGLGCAVFSGSQHRAREI--AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
GL ++F+ A CG+ +N S FGG K++G GR +G
Sbjct: 402 VPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIG-GAFGGEKETGGGRESG 460
Query: 515 VEGLRA 520
+ +
Sbjct: 461 SDAWKQ 466
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 2e-72
Identities = 139/462 (30%), Positives = 211/462 (45%), Gaps = 31/462 (6%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126
+PAT + +G + AE + +A AR+A WA + R + L L + E
Sbjct: 2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDP-RLRARVLLELADAFEANAE 60
Query: 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKV 184
+ + + + GK + +A EI ++ + L+ E E S++ ++
Sbjct: 61 RLARLLALENGKILGEAR-FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLRE--- 116
Query: 185 EFHPLGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
P+GV G IV WN P P LAA G +V+K A + II+
Sbjct: 117 ---PMGVAGIIVPWNSPVVLLVRSLAPALAA---GCTVVVKP---AGQTAQINAAIIRIL 167
Query: 242 LAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
P +V++ T +E LV+S VD I F GS GR IM A+ TL + LE
Sbjct: 168 AEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLE 227
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV DD D+ RA +GQ C R V R I ++A + +
Sbjct: 228 LGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAA 287
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG--SFGHLSEGAVDQYFP 416
V GP L DMG L + +++ +V A+ GAE++ RG L++GA +
Sbjct: 288 VKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGA---FLR 344
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PT++ + ++QEE FGP++ + F+ + E V LAND+ YGL +V++ RA +
Sbjct: 345 PTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRV 404
Query: 477 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
A I+ G IND+ + GG + SG GR GV L
Sbjct: 405 ARAIRAGTVWINDWNKLF--AEAEEGGYRQSGLGRLHGVAAL 444
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 238 bits (610), Expect = 5e-72
Identities = 147/454 (32%), Positives = 224/454 (49%), Gaps = 30/454 (6%)
Query: 86 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKTM 140
+VD V ARKA + W + + +R RILL++ + +H + + + + D GK
Sbjct: 41 EDVDRAVKAARKAFDEGPWPRMTGYERS---RILLRFADLLEKHADELAALETWDNGKPY 97
Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH-PLGVVGAIVSWN 199
A E+ + +K + G ++ H P+GVVG I+ WN
Sbjct: 98 EQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYT-----LHEPIGVVGQIIPWN 152
Query: 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVITGF 258
+P + A+ GN IV+K +E S A LAA G P+ +++++TGF
Sbjct: 153 FPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLA-----AKLAAEAGLPDGVLNIVTGF 207
Query: 259 AETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 314
T A ++S VDK+ F GS VG++IM+ A+K+ L PVTLELGGK FIVC+D DV
Sbjct: 208 GPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVD 267
Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 374
++A A + GQ C R +VH IY FV + G P + G
Sbjct: 268 KAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQ 327
Query: 375 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 434
E EK+ + + ++GA ++ G G+ Y PT+ +V MK+ ++E
Sbjct: 328 VDKEQFEKILSYIEHGKEEGATLITGGD----RIGSKGYYIQPTIFSDVKDDMKIARDEI 383
Query: 435 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 494
FGP+ I+KF T +EV+K AN+S+YGL VFS + A ++ ++ G +N + +
Sbjct: 384 FGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCY--DV 441
Query: 495 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
S+PFGG K SG GR G+ L VK+VV
Sbjct: 442 FDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 237 bits (607), Expect = 6e-72
Identities = 132/473 (27%), Positives = 221/473 (46%), Gaps = 43/473 (9%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK---YIIEHQEL 127
P T + +G PA + + E +A A + S R Q IL K + +E
Sbjct: 6 PYTGEVVGTVPAGTEEALREALALAA------SYRSTLTRYQRSAILNKAAALLEARREE 59
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM-----IHKKA 182
+ + ++G + D E+ + + + +E R G S + KA
Sbjct: 60 FARLITLESGLCLKDT-RYEVGRAADVLRFAAAEAL-------RDDGESFSCDLTANGKA 111
Query: 183 KVEF---HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
+ F PLGVV AI +N+P + + + + A+ + N IV+K SE S Y +
Sbjct: 112 RKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLS-AIYLADL- 169
Query: 240 AALAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 296
L G P +++ V+TG E G+ L++ VD + F G VG+ I A+
Sbjct: 170 --LYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIA--ATAGYKRQL 225
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
LELGG D IV DD D+ A +AV + +SGQ C +R VH + FV + +
Sbjct: 226 LELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKS 285
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
++ G P+ DMG + E + +++N V +A+ +GA +L G+ +GA+ +
Sbjct: 286 AALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVL----LGNQRQGAL---YA 338
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PTV+ +V +L+ EE FGP+ P+++ +E + ++N + YGL V + + +
Sbjct: 339 PTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRL 398
Query: 477 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGV-EGLRACCLVKSVV 528
++ G +N+ + + PFGGVKDSG G GV E ++ VK+
Sbjct: 399 VERLDVGTVNVNE-VPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 4e-71
Identities = 130/457 (28%), Positives = 217/457 (47%), Gaps = 31/457 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P + +G PA RA+ +E +A AR + +R L + + E +
Sbjct: 6 PYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAK 65
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVE 185
I + + GK + DA E+ + + E GE+ + S + +
Sbjct: 66 IIACEGGKPIKDA-RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIRE-- 122
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
P+GVV AI +N+P + + + + A+ +G +V+K + S +I+ A
Sbjct: 123 --PVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEA---- 176
Query: 246 GAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302
G PE ++ V+TG G+A + V + F GS VG + NA + LELGG
Sbjct: 177 GVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGK--RIALELGGN 234
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
IV D D+ + + +GQ C +R YVH ++Y F+ VK + G
Sbjct: 235 APVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVG 294
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 422
PL D+G L E +E+++ V +A++ GA +L G +GA+ F PTV+ +
Sbjct: 295 DPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGE----RDGAL---FKPTVLED 347
Query: 423 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 482
V KL EE FGP++PI++++ EE +++AN + YGL +F+ + A + A +++
Sbjct: 348 VPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEV 407
Query: 483 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
G +ND +S + +PFGGVK+SG GR EG+
Sbjct: 408 GGVMVND-SSAFRTDWMPFGGVKESGVGR----EGVP 439
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 236 bits (603), Expect = 6e-71
Identities = 141/476 (29%), Positives = 222/476 (46%), Gaps = 40/476 (8%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I + P++ PAT + L +VD VA AR A + W+ R
Sbjct: 25 FINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRA 84
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR 171
+ L + ++I +HQ L + S D GK + ++ +I Y
Sbjct: 85 RHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHF--------------YH 130
Query: 172 SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENAS 228
+G + + + P+GVVG IV WN+P + P LA GN +V+K +E
Sbjct: 131 HAGWAQLLDTELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAM---GNTVVLKPAEYTP 187
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286
+ + I A G P +++++TG G AL + VDK+ F GS VGR + R
Sbjct: 188 LTALLFAEICAEA----GLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRR 243
Query: 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA 346
+ T ++LELGGK FIV DD D+ + V A + GQ C R V +
Sbjct: 244 ATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAE 303
Query: 347 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG----S 402
+ ++ + + + G PL DMGA+ ++++ LV + +GA++ G S
Sbjct: 304 ELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPS 363
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
G ++PPT+ NV ++ QEE FGP++ ++ F T +E V LAN++ YGL
Sbjct: 364 KGP--------FYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLA 415
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
+V+S + A E+A ++ GV IN N + FGG ++SGFGR G EGL
Sbjct: 416 ASVWSENLSLALEVALSLKAGVVWIN--GHNLFDAAAGFGGYRESGFGREGGKEGL 469
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 233 bits (597), Expect = 1e-70
Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 18/438 (4%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
E+D ++ R + + R L+ L + +++E I E +D G+ + L
Sbjct: 5 DEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLL 64
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSG--RSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203
E+ I +L +KW K E G M K ++ PLGVV I WNYP
Sbjct: 65 TEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGK-PRIRKEPLGVVLIIGPWNYPVL 123
Query: 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETG 262
+P++ A+ +G +V+K SE + ++ L + V+ G ET
Sbjct: 124 LALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKYL-----DPDAFQVVQGGVPETT 178
Query: 263 EALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322
L DKI + GS VGR+I A+K LTPVTLELGGK IV + D+ A+ +
Sbjct: 179 ALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILW 238
Query: 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382
++GQ C + V +Y FV ++ K++ G A D + H +
Sbjct: 239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASP-DYTRIVNPRHFNR 297
Query: 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442
L++L++ KG +++ G ++ PPT++ +V+ LM EE FGP++PI+
Sbjct: 298 LKSLLDTT--KG-KVVIGGEMD-----EATRFIPPTIVSDVSWDDSLMSEELFGPVLPII 349
Query: 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG 502
K + +E +K+ N L +F+ + I + + G IND + + PFG
Sbjct: 350 KVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFG 409
Query: 503 GVKDSGFGRFAGVEGLRA 520
GV DSG+G + G G
Sbjct: 410 GVGDSGYGAYHGKYGFDT 427
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 233 bits (597), Expect = 4e-70
Identities = 144/471 (30%), Positives = 221/471 (46%), Gaps = 22/471 (4%)
Query: 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKS-SFKQRRQFLRILLKYI 121
V+ Y P+T K + + A+VD V A A + W S +R + L L +
Sbjct: 22 GTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLM 81
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
+ + + I + D GKT A ++ + + + W + + I K
Sbjct: 82 ERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGG----WADKIHGQVIETDIKKL 137
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
P+GV G I+ WN+P + A+ +GN IV+K SE S + ++I A
Sbjct: 138 TYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEA 197
Query: 242 LAAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTL 297
G P +++V++G+ T +SS +DK+ F GS VGR +M A+K+ L VTL
Sbjct: 198 ----GFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTL 253
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGGK IV DD D+ + GQ C R YV IY FV + + K
Sbjct: 254 ELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAK 313
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-P 416
+ G P A G E++ + + +GA + G H +EG YF
Sbjct: 314 KLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGAT-VETGGKRHGNEG----YFIE 368
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PT+ +V MK+++EE FGP++ ++KF T+EE +K ANDS YGL AVF+ + + A +
Sbjct: 369 PTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRV 428
Query: 477 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
A ++ G +N + N + +PFGG K SG GR G L +K+V
Sbjct: 429 ANALKAGTVWVNCY--NLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 231 bits (592), Expect = 2e-69
Identities = 145/490 (29%), Positives = 236/490 (48%), Gaps = 33/490 (6%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQR 110
+I R QSE ++ PAT + + + + A+VD VA A +A WAK++ +R
Sbjct: 3 FIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAER 62
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS--------EG 162
+ L L I +H E + ++ + +GK++ L + +L G
Sbjct: 63 GRILLRLADLIEQHGEELAQLETLCSGKSI---HLSRAFEVGQSANFLRYFAGWATKING 119
Query: 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222
E L P S A P+GVV IV WN+ + AA+ +G IVIK
Sbjct: 120 ET-LAPSIPSMQGE--RYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIK 176
Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGV 280
SE + R+ + A A G P+ +++V+ G G L+S V K+ F GS
Sbjct: 177 PSEFTPLT---LLRVAELAKEA-GIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVAT 232
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G+ I R A+ LT VTLELGGK+A D D+ V + + A GQ CA ERFYV
Sbjct: 233 GKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYV 292
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
HR + V+++ + + S G P+ G L H +K+ + ++DA +G EI+
Sbjct: 293 HRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRG 352
Query: 401 GSFGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 457
G A+ + PT+++ + +LM+EE FGP++ + + +EE+++L ND+
Sbjct: 353 G-------EALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDT 405
Query: 458 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG 517
+GL +V++ + +A +I+ G +N ++ ++PFGG+K SG GR G
Sbjct: 406 PFGLTASVWTNNLSKALRYIPRIEAGTVWVN--MHTFLDPAVPFGGMKQSGIGREFGSAF 463
Query: 518 LRACCLVKSV 527
+ +KSV
Sbjct: 464 IDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 2e-67
Identities = 140/462 (30%), Positives = 221/462 (47%), Gaps = 18/462 (3%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PA + + + +VD VA ARKA + W + S +R L + I +E +
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
I + ++GK + + GEI + + S Y + G M+ V P
Sbjct: 64 ALIETLESGKP-ISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDML---GLVLREP 119
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
+GVVG I WN+PF + + A+ +G +V+K SE S + + + + A G P
Sbjct: 120 IGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTT---LMLAELLIEA-GLP 175
Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
+V+++TG+ A G+A+ VD + F GS VG+ I A++ L V+LELGGK+
Sbjct: 176 AGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQ 235
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV D D+ A V ++G+ C R VH I FV+ V + V G PL
Sbjct: 236 IVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPL 295
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
+ +GA+ K+ + V+ +GA +L G L+ A ++ PT+ +V
Sbjct: 296 DPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGG--ERLASAA-GLFYQPTIFTDVTP 352
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485
M + +EE FGP++ ++ F+T +E + LAND+ YGL V+S A +A +I+ G
Sbjct: 353 DMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTV 412
Query: 486 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+N F LPFGG K SG GR G G+ +K+V
Sbjct: 413 WVNTFLDGS--PELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 223 bits (571), Expect = 2e-66
Identities = 124/445 (27%), Positives = 204/445 (45%), Gaps = 30/445 (6%)
Query: 77 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 136
+G + S + D +A A A W ++S + R L + +E + + +R+
Sbjct: 28 VGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREE 87
Query: 137 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM--IHKKAKVEFH--PLGVV 192
GKT+ +A GE+ + + E R SG ++ +VE PLGVV
Sbjct: 88 GKTLPEA-RGEVTRAGQIFRYYAGEA-------LRLSGETLPSTRPGVEVETTREPLGVV 139
Query: 193 GAIVSWNYPFHNI----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
G I WN+P I P LA GN +V K +E S + +++ L G P
Sbjct: 140 GLITPWNFPI-AIPAWKIAPALAY---GNTVVFKPAELTPASA---WALVEI-LEEAGLP 191
Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
+ +++ G +E G+ALV VD + F GS VGR I A+ V LE+GGK+
Sbjct: 192 AGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPL 251
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
+V DD D+ + AV+ A S+GQ C + R V I+ FV + + K++ G L
Sbjct: 252 VVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDAL 311
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
D+G + EK + A +GA+++ G L Y P + V +
Sbjct: 312 DEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGG--ERLKRPDEGYYLAPALFAGVTN 369
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485
M++ +EE FGP+ +++ +E + +AND+ +GL + + S A +++ GV
Sbjct: 370 DMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVV 429
Query: 486 AINDFASNYMCQSLPFGGVKDSGFG 510
+N + + +PFGG K S +G
Sbjct: 430 MVN-LPTAGVDYHVPFGGRKGSSYG 453
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 221 bits (566), Expect = 2e-65
Identities = 130/445 (29%), Positives = 206/445 (46%), Gaps = 25/445 (5%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
+ R+Q LR LL+ + E+++ E +D G+ + + E++ T +I LL +++
Sbjct: 27 PLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEY 86
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
LKPE + K+ + PLGVV I +WNYP + P+ A+ +GN +V+K SE
Sbjct: 87 LKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSE 146
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVSSVDKIIFVGSPGVGRMI 284
+ + +++ L + V VI G E T E L D I F GSP VG+++
Sbjct: 147 LSPHTSKLMAKLLTKYL-----DPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLV 201
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
M+ A++ LTP TLELGGK IV ++ A+ ++GQ C + VHR I
Sbjct: 202 MQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSI 261
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
F+ + + +K G D + H+++L L+ D G +++ G
Sbjct: 262 KDKFIEALKEAIKEF-FGEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYGGEVD 317
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
++Y PT+IVN + LMQEE FGPI+PI+ + +EV++ N L
Sbjct: 318 -----IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALY 372
Query: 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524
F + + G IND + + +LPFGGV +SG G + G G
Sbjct: 373 YFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHP 432
Query: 525 KSVVED----------RWWPYIKTK 539
K V+ R+ PY K
Sbjct: 433 KPVLNKSTGNSFDLSLRYPPYTSFK 457
|
Length = 493 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 220 bits (563), Expect = 2e-65
Identities = 126/447 (28%), Positives = 210/447 (46%), Gaps = 31/447 (6%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
+ R + L+ L + I +++ I E +D GK+ +A + EI +I + + +KW
Sbjct: 18 DVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKW 77
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
+KP+ + K+ + + P GVV I WNYPF P++ A+ +GN V+K SE
Sbjct: 78 MKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSE 137
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS-VDKIIFVGSPGVGRMI 284
+ +II+ E V V+ G E + L+ D I F GS VG+++
Sbjct: 138 LTPNTSKVIAKIIEETF-----DEEYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIV 192
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
M A+K LTPVTLELGGK IV +D ++ A+ V ++GQ C + VH +
Sbjct: 193 MEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESV 252
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
F+ ++ + +K PL D G + +H ++L L+ +I+ G+
Sbjct: 253 KEKFIKELKEEIKKFYGEDPLESP-DYGRIINEKHFDRLAGLL-----DNGKIVFGGNTD 306
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
Y PT++ NV +MQEE FGPI+P++ ++T +E +++ L
Sbjct: 307 RE-----TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALY 361
Query: 465 VFSGSQHRAREIAAQIQCGVAAIND----FASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520
+FS + +++ + G IND A+ Y+ PFGGV +SG G + G
Sbjct: 362 LFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL----PFGGVGNSGMGSYHGKYSFDT 417
Query: 521 CCLVKSVVEDRWWPYIKTKIPKPIQYP 547
KS+++ T P++YP
Sbjct: 418 FSHKKSILKK------STWFDLPLRYP 438
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 220 bits (562), Expect = 7e-65
Identities = 145/463 (31%), Positives = 220/463 (47%), Gaps = 46/463 (9%)
Query: 85 RAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKT 139
+ +VD V AR+A W + S +R RI++K+ I EH E + + + D GK
Sbjct: 57 KEDVDLAVKAAREAFDHGPWPRMSGFERG---RIMMKFADLIEEHIEELAALDTIDAGKL 113
Query: 140 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK---KAKVEFH------PLG 190
+I + + +K IH K + P+G
Sbjct: 114 FALGKAVDIPAAAGLLRYYAGAADK-------------IHGETLKMSRQLQGYTLKEPIG 160
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
VVG I+ WN+P F + A+ +G +V+K +E S FY + + A G P+
Sbjct: 161 VVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLA----GVPDG 216
Query: 251 LVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFI 306
+++V+TGF T A ++S VDK+ F GS VGR IM+ A+ + L V+LELGGK +
Sbjct: 217 VINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLL 276
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
+ DD DV +A+ + G+ C + R YV IY FV ++ + K G P
Sbjct: 277 IFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFD 336
Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 426
+ G + EK+ + + +GA +L G G Y PT+ +V
Sbjct: 337 PRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK----PCGDKGYYIEPTIFTDVTED 392
Query: 427 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486
MK+ Q+E FGP+M +MKF T EE +K AN+++YGL + + A ++ I+ G
Sbjct: 393 MKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIW 452
Query: 487 IN-DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
+N FA + C PFGG K SGFGR G++ L VKSVV
Sbjct: 453 VNCYFAFDPDC---PFGGYKMSGFGRDQGMDALDKYLQVKSVV 492
|
Length = 501 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 215 bits (549), Expect = 7e-64
Identities = 130/418 (31%), Positives = 203/418 (48%), Gaps = 36/418 (8%)
Query: 114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKP 168
LR + I E I + + GK A + E+ T + I ++ EGE +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE--IIQ 57
Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
R ++ K+ LGV I+ WN+PF I M A+ +GN IVIK SE
Sbjct: 58 SDRPGENILLFKR------ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTP 111
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIM 285
+ F I + +G P+ + +++ G ET G+ L + V + GS G IM
Sbjct: 112 -NNAIAFAKI---VDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 167
Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVH 341
A+K +T V LELGGK IV DD D+ +AV+A + S SGQ C AER YV
Sbjct: 168 AAAAKNITKVCLELGGKAPAIVMDDADLD----LAVKAIVDSRVINSGQVCNCAERVYVQ 223
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
+ IY FV+++ + +++V G P MG L E+++ V A+++GA +
Sbjct: 224 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALG 283
Query: 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460
G + Y+PPT++++V M +M EE FGP++P++ F+T EE + +ANDS YG
Sbjct: 284 GK----AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYG 339
Query: 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
L ++++ + + A + ++ G IN N+ G + SG G G GL
Sbjct: 340 LTSSIYTQNLNVAMKAIKGLKFGETYIN--RENFEAMQGFHAGWRKSGIGGADGKHGL 395
|
Length = 409 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 8e-64
Identities = 130/449 (28%), Positives = 209/449 (46%), Gaps = 42/449 (9%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
+++E +A A KA + +R L + + E E + E + GK + DA
Sbjct: 19 GPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78
Query: 144 SLGEIMTTCEKITWLLSE-----GEKWLKPEY--RSSGRSMIHKKAKVEFHPLGVVGAIV 196
GE+ + E GE L + R GR + ++ P+G V AI
Sbjct: 79 R-GEVARAIDTFRIAAEEATRIYGE-VLPLDISARGEGRQGLVRRF-----PIGPVSAIT 131
Query: 197 SWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 252
+N+P H + P +AA G V+K + S I+ LA G P+
Sbjct: 132 PFNFPLNLVAHKV-APAIAA---GCPFVLKPASRTPLSAL----ILGEVLAETGLPKGAF 183
Query: 253 DVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310
V+ + + LV+ + + F GSP VG + A K V LELGG A IV D
Sbjct: 184 SVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAVIVDSD 241
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 370
D+ AQ + A +GQ+C +R VHR +Y F S++ VK++ G P D
Sbjct: 242 ADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATD 301
Query: 371 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 430
+G + +E+++ VN+A+D GA++L G +GA+ PT++ +V M++
Sbjct: 302 VGPMISESEAERVEGWVNEAVDAGAKLLTGGK----RDGAL---LEPTILEDVPPDMEVN 354
Query: 431 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490
EE FGP++ + ++ +E + NDS++GL VF+ +A +++ G IND
Sbjct: 355 CEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDV 414
Query: 491 ASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
+ + +P+GGVKDSG GR EG+R
Sbjct: 415 PT-FRVDHMPYGGVKDSGIGR----EGVR 438
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 9e-63
Identities = 146/456 (32%), Positives = 226/456 (49%), Gaps = 36/456 (7%)
Query: 87 EVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKTMV 141
+V+ VA ARKA + W K + +R RILL++ + +H + + + + D GK
Sbjct: 96 DVNRAVAAARKAFDEGPWPKMTAYERS---RILLRFADLLEKHNDELAALETWDNGKPYE 152
Query: 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201
++ E+ + +K + G + P+GV G I+ WN+P
Sbjct: 153 QSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQ----TLHEPIGVAGQIIPWNFP 208
Query: 202 ---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 258
F P LA GN IV+K +E S + +++ A G P +++V++GF
Sbjct: 209 LLMFAWKVGPALAC---GNTIVLKTAEQTPLSALYAAKLLHEA----GLPPGVLNVVSGF 261
Query: 259 AETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 314
T A ++S VDK+ F GS G++++ A+K+ L PVTLELGGK FIVC+D DV
Sbjct: 262 GPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVD 321
Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAGPPLAGKYDMGA 373
++A A + GQ C R +VH +Y FV + A+ +K V G P + G
Sbjct: 322 KAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRV-VGDPFKKGVEQGP 380
Query: 374 LCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 432
E EK+ + ++ GA + G FG S+G Y PTV NV M + Q+
Sbjct: 381 QIDSEQFEKILRYIKSGVESGATLECGGDRFG--SKG---YYIQPTVFSNVQDDMLIAQD 435
Query: 433 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 492
E FGP+ I+KF +EV++ AN++RYGL VF+ + A ++ ++ G +N F
Sbjct: 436 EIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCF-- 493
Query: 493 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
+ ++PFGG K SG GR G+ L VK+VV
Sbjct: 494 DVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVV 529
|
Length = 538 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 7e-62
Identities = 142/462 (30%), Positives = 218/462 (47%), Gaps = 41/462 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + LG A+VD A++A K WA+ +R+++L + I +H + I
Sbjct: 23 PATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAV 82
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFH 187
+ D G+ + + + + ++ K E GR+ H V
Sbjct: 83 LECLDCGQPL--RQTRQQVIRAAENFRFFAD-----KCEEAMDGRTYPVDTHLNYTV-RV 134
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
P+G VG I WN PF ML+ A+ GN +V+K +E WS R+ + A
Sbjct: 135 PVGPVGLITPWNAPF------MLSTWKIAPALAFGNTVVLKPAE---WSPLTAARLAEIA 185
Query: 242 LAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
A G P+ + +++ GF E G+ALV+ V + F G G +IMRN + TL ++E
Sbjct: 186 KEA-GLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSME 244
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV DD D+ V +G+ C + R V I FV ++ + V++
Sbjct: 245 LGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRA 304
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS------FGHLSEGAVD 412
+ G PL + ++G L EH K+ V A +GA IL G L G
Sbjct: 305 IRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRG--- 361
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
Y PTV ++ M++ QEE FGP++ ++ F +EE ++ AND+RYGL V++ R
Sbjct: 362 NYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGR 421
Query: 473 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
A +A ++ G+ +N + N PFGGVK SG GR G
Sbjct: 422 AHRVALALEAGMIWVN--SQNVRHLPTPFGGVKASGIGREGG 461
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 211 bits (538), Expect = 2e-61
Identities = 145/466 (31%), Positives = 219/466 (46%), Gaps = 36/466 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELIC 129
P + + AEVD VA AR A K W K + +R L + I +
Sbjct: 21 PVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFL 80
Query: 130 EISSRDTGKTMVDASLGEI-------MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA 182
DTGK AS +I + + +E + P+ + + + K
Sbjct: 81 AAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRK-- 138
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
PLGVVG I WN P + + A+ GN +V+K SE + ++ A
Sbjct: 139 -----PLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNA-- 191
Query: 243 AAVGAPENLVDVITGF--AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
VG P+ + +V+ GF GE L VD I F G G IM+ A+ + PV+ E
Sbjct: 192 --VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFE 249
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK+A IV D D +R+A ++GQ C G ER YV R I+ FV+ + +S
Sbjct: 250 LGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAES 309
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG---SFG-HLSEGAVDQY 414
+ G P +MG L EH +K+ + A+++GA ++ G FG L+ GA +
Sbjct: 310 LKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGA---W 366
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
PT+ + + +++ EE FGP I F+++EEV+ LAND+ YGL +V++ RA
Sbjct: 367 VQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAH 426
Query: 475 EIAAQIQCGVAAINDFASNYMCQSL--PFGGVKDSGFGRFAGVEGL 518
+A Q++ G+ +N ++ + L PFGG K SG GR GV L
Sbjct: 427 RVARQMEVGIVWVN----SWFLRDLRTPFGGSKLSGIGREGGVHSL 468
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 209 bits (535), Expect = 2e-61
Identities = 135/475 (28%), Positives = 220/475 (46%), Gaps = 46/475 (9%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + + F AL+ EVD +A+A + + ++F QR ++ + + +
Sbjct: 8 PATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAA 67
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE---YRSSGRSMIHKKAKVEFH 187
+ + + GKT+ A E + + + E L E + G S +A V +
Sbjct: 68 LMTLEMGKTLASAK-AEALKCAKGFRYYAEHAEALLADEPADAAAVGAS----RAYVRYQ 122
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
PLGVV A++ WN+P + A+ +GN ++K + N + Q AL
Sbjct: 123 PLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASN----------VPQTALY---- 168
Query: 248 PENLVDVIT--GFAET--GEALVSS--VDKII---------FVGSPGVGRMIMRNASKTL 292
L D+ GF + LV S V+ I+ GS GR + A +
Sbjct: 169 ---LADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEI 225
Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
LELGG D FIV D+ A+ AV A +Q++GQ+C A+RF VH D+Y F +
Sbjct: 226 KKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKF 285
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
+ ++ G P D+G L + ++++ V+DA+ GA IL G +G
Sbjct: 286 VARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCG---GKRPDGP-G 341
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
++PPTVI ++ M+L EE FGP+ + + +E +++AN + +GLG ++ +
Sbjct: 342 WFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAE 401
Query: 473 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
++ G IN +Y LPFGGVK SG+GR G+R C +K+V
Sbjct: 402 QERFIDDLEAGQVFINGMTVSY--PELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (535), Expect = 3e-61
Identities = 133/448 (29%), Positives = 216/448 (48%), Gaps = 25/448 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA LG P + E + A +A W + K+R LR ++EHQ+ +
Sbjct: 33 PANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLAR 92
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFH 187
+ + + GK + +A GEI I W EG++ P +++ R ++ K+
Sbjct: 93 LMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ------ 145
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV AI WN+P I A+ +G +V+K + +S + A G
Sbjct: 146 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA----GI 201
Query: 248 PENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
P + +V+TG A G L S+ V K+ F GS +GR +M +K + V+LELGG
Sbjct: 202 PAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 261
Query: 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364
FIV DD D+ + A+ + +++GQ C A R YV +Y F ++ + V + G
Sbjct: 262 FIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDG 321
Query: 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 424
L +G L + K++ + DAL+KGA ++ G H G +F PT++V+V
Sbjct: 322 LEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHELGG---NFFQPTILVDVP 377
Query: 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
K+ +EE FGP+ P+ +F + +V+ AND+ +GL ++ R + ++ G+
Sbjct: 378 ANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGI 437
Query: 485 AAIND-FASNYMCQSLPFGGVKDSGFGR 511
IN SN + PFGG+K SG GR
Sbjct: 438 VGINTGIISN---EVAPFGGIKASGLGR 462
|
Length = 482 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 9e-59
Identities = 138/459 (30%), Positives = 214/459 (46%), Gaps = 35/459 (7%)
Query: 92 VAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 151
V +AR+A + R Q L LL+ + E+++ I E ++D K +A L EI+
Sbjct: 4 VRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLV 63
Query: 152 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPM 209
+I + +S +W+KPE +++ V + PLGVV I +WNYP P+
Sbjct: 64 KNEIKYAISNLPEWMKPEP--VKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPL 121
Query: 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS 268
+ A+ +GN +VIK SE + + +I L + V+ G ET E L
Sbjct: 122 VGAIAAGNCVVIKPSEVSPATAKLLAELIPKYL-----DKECYPVVLGGVEETTELLKQR 176
Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328
D I + GS VG+++M+ A+K LTPVTLELGGK V D+ A+ ++
Sbjct: 177 FDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236
Query: 329 GQNCAGAERFYV--HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
GQ C + YV ++ FV + K +K P D G + H ++L+ L
Sbjct: 237 GQTCIAPD--YVLCTPEVQEKFVEALKKTLKEFYGEDPKESP-DYGRIINDRHFQRLKKL 293
Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446
+ G ++ G ++Y PTV+ +V + +MQEE FGPI+PI+ N
Sbjct: 294 L-----SGGKVAIGGQTD-----EKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNN 343
Query: 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKD 506
+E ++ N L VFS ++ +I + G +ND +Y SLPFGGV +
Sbjct: 344 LDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGN 403
Query: 507 SGFGRFAGVEGL-----RACCLVKS-----VVEDRWWPY 535
SG G + G + CLVKS + R+ PY
Sbjct: 404 SGMGAYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPY 442
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 2e-58
Identities = 130/454 (28%), Positives = 206/454 (45%), Gaps = 35/454 (7%)
Query: 77 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY--IIEHQ--ELICEIS 132
LG ++ E + V AR A W ++ ++R R+LL+ ++ + EL +
Sbjct: 60 LGTVQKATKEEAEAAVQAARAAFPTWRRTPPEER---ARLLLRAAALLRRRRFELAAWM- 115
Query: 133 SRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH-PLGV 191
+ GK +A ++ E I +L + L+ R M+ + + PLGV
Sbjct: 116 VLEVGKNWAEA-DADV---AEAIDFLEYYAREMLR--LRGFPVEMVPGEDNRYVYRPLGV 169
Query: 192 VGAIVSWNYPFHNIFNPM-LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
I WN+P I M AA+ +GN +V+K +E+ I++ A G P
Sbjct: 170 GAVISPWNFPL-AILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA----GLPPG 224
Query: 251 LVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT------LTPVTLELGG 301
+V+ + G E G+ LV V I F GS VG I A+K L V E+GG
Sbjct: 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGG 284
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
K+A IV +D D+ A+ VR+A GQ C+ R VH +Y F+ ++ + K++
Sbjct: 285 KNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKV 344
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVI 420
G P + MG + ++++ + K L G G + E A + YF PT+
Sbjct: 345 GDPEDPEVYMGPVIDKGARDRIRRYIEIG--KSEGRLLLG--GEVLELAAEGYFVQPTIF 400
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+V +L QEE FGP++ ++K +E +++AND+ YGL VFS S +
Sbjct: 401 ADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREF 460
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
+ G N + + PFGG K SG G AG
Sbjct: 461 EVGNLYANRKITGALVGRQPFGGFKMSGTGSKAG 494
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 4e-58
Identities = 132/452 (29%), Positives = 211/452 (46%), Gaps = 26/452 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P T K P + +++ + A A++ W K+S +R L + + + E++
Sbjct: 23 PVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAV 82
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA-KVEFH-P 188
+ D GK + + +I + + ++ + S I + FH P
Sbjct: 83 AETWDNGKPVRETLAADIPLAIDHFRYFAGC----IRAQ--EGSISEIDENTVAYHFHEP 136
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
LGVVG I+ WN+P + A+ +GN +V+K +E S +I L P
Sbjct: 137 LGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLL-----P 191
Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
+V+V+ GF E G+ L SS + K+ F G GR+IM+ AS+ + PVTLELGGK
Sbjct: 192 PGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPN 251
Query: 306 IVCDDVDVPHVA------QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
I DV A + V AL + G+ C R + IY F+ + + VK++
Sbjct: 252 IFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIYDRFMERALERVKAI 310
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G PL + +GA LE EK+ + ++ ++GAE+L G L Y+ PT
Sbjct: 311 KQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTT 370
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ M++ QEE FGP++ + F +EE +++AND+ YGLG V++ + A +
Sbjct: 371 FKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRG 429
Query: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 511
IQ G N + Y + FGG K SG GR
Sbjct: 430 IQAGRVWTNCYHL-YPAHA-AFGGYKQSGIGR 459
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 201 bits (512), Expect = 4e-58
Identities = 135/465 (29%), Positives = 223/465 (47%), Gaps = 21/465 (4%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + L P +++ + A + W +++ R Q LR + K + E + +
Sbjct: 14 PATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQ 73
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ +R+ GK + A E+ + W G LK E + +++A +E+ PLG
Sbjct: 74 MITREMGKPINQAR-AEVAKSANLCDWYAEHGPAMLKAE----PTLVENQQAVIEYRPLG 128
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
+ AI+ WN+P + + + +GNG ++K + N GC ++I G P+
Sbjct: 129 TILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVM--GCA--QLIAQVFKDAGIPQG 184
Query: 251 LVDVITGFAETGEALVSSVDKIIFV---GSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307
+ + G + + + +I V GS G I A L LELGG D FIV
Sbjct: 185 VYGWLNA-DNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243
Query: 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367
+D D+ + AV Q++GQ CA A+RF + I + F + ++ G P
Sbjct: 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDE 303
Query: 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 427
+ +G + + ++L + V L +GA +L G GA + Y+ PTV+ NV M
Sbjct: 304 ENALGPMARFDLRDELHHQVEATLAEGARLLLG---GEKIAGAGN-YYAPTVLANVTPEM 359
Query: 428 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
+EE FGP+ I E ++LANDS +GL +F+ + +AR++AA+++CG I
Sbjct: 360 TAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFI 419
Query: 488 NDF-ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531
N + AS+ + FGGVK SGFGR GL C +++V +DR
Sbjct: 420 NGYCASD---ARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461
|
Length = 462 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 199 bits (507), Expect = 1e-57
Identities = 125/414 (30%), Positives = 195/414 (47%), Gaps = 20/414 (4%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
S + R+ L+ LL+ + E+++ I +D GK ++ E+ + E +KW
Sbjct: 19 SAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKW 78
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
+ PE + + KA++ PLGVV I +WN+PF P++ A+ +GN +V+K SE
Sbjct: 79 MAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSE 138
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSV-DKIIFVGSPGVGRMI 284
A + ++I L + VI G AL+ DKI F GSP VGR+I
Sbjct: 139 LAPATSALLAKLIPEYLDT-----KAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRII 193
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-IAVRAALQSSGQNCAGAERFYVHRD 343
M A+K LTPVTLELGGK IV VD+ + IA ++GQ C + V
Sbjct: 194 MAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEES 253
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
+ + ++ P K D+ + H ++L L++D A+ + G
Sbjct: 254 FAPTLIDALKNTLEKFFGENPKESK-DLSRIVNSHHFQRLSRLLDDP--SVADKIVHG-- 308
Query: 404 GHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460
G D+ Y PT++++ +M EE FGP++PI+ EE +++ N
Sbjct: 309 -----GERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKP 363
Query: 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
L VF+ ++ R I A+ G ND Y +LPFGGV +SGFG + G
Sbjct: 364 LAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHG 417
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 3e-56
Identities = 132/433 (30%), Positives = 199/433 (45%), Gaps = 19/433 (4%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
++ VA+ R+ + S + R+ L+ LL+ + +++E I + +D GK V+A E
Sbjct: 8 LEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDE 67
Query: 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207
+ + LS +KW+ P+ A+V PLGVV SWN+P
Sbjct: 68 VGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLE 127
Query: 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS 267
P++ A+ +GN +V+K SE A + F I L + V VI G GE L+
Sbjct: 128 PLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYLDS-----KAVKVIEGGPAVGEQLLQ 182
Query: 268 SV-DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 326
DKI F GSP VGR+IM A+K LTPV LELGGK IV D + ++AV +
Sbjct: 183 HKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIV-DSLSSSRDTKVAVNRIVG 241
Query: 327 S-----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381
+GQ C + V + + + +K P K M + +H +
Sbjct: 242 GKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKS-MARILNKKHFQ 300
Query: 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441
+L NL+ D A I+ GS + PT+++N +M EE FGP++PI
Sbjct: 301 RLSNLLKDPRVA-ASIVHGGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPI 354
Query: 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 501
+ E+ + N L F+ ++ R I ++ G ND Y C SLPF
Sbjct: 355 ITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPF 414
Query: 502 GGVKDSGFGRFAG 514
GGV +SGFGR+ G
Sbjct: 415 GGVGESGFGRYHG 427
|
Length = 484 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 3e-56
Identities = 133/500 (26%), Positives = 224/500 (44%), Gaps = 44/500 (8%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I ++ + Y PAT + + P + EVD VA A+ A W+ + +R
Sbjct: 4 FINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKR- 62
Query: 112 QFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
+++ K+ + E+ + + + + + GKT+ DA G+++ E + + S LK
Sbjct: 63 --QQVMFKFRQLLEENLDELARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHL-LKG 118
Query: 169 EY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH--NIFNPMLAAVFSGNGIVIKVSE 225
EY + R + PLGVV I +N+P PM A+ GN V+K SE
Sbjct: 119 EYLENVARGID---TYSYRQPLGVVAGITPFNFPAMIPLWMFPM--AIACGNTFVLKPSE 173
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283
+ ++Q A G P+ +++V+ G E AL+ + + FVGS VG
Sbjct: 174 RVPGAAMRLAELLQEA----GLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEY 229
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
I A+ V G K+ +V D D+ A V AA ++GQ C D
Sbjct: 230 IYERAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGD 289
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
++ ++ + K + G DMG + E+++ L+ +++GA+++ G
Sbjct: 290 EADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGR- 348
Query: 404 GHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
G G + F PT++ NV MK+ +EE FGP++ I++ +T +E + + N + YG G
Sbjct: 349 GVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNG 408
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAIN--------DFASNYMCQSLPFGGVKDSGFG--RF 512
A+F+ S AR+ ++ G+ IN F FGG K S FG F
Sbjct: 409 AAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFF---------SFGGWKGSFFGDLHF 459
Query: 513 AGVEGLRACCLVKSVVEDRW 532
G +G+R K+V RW
Sbjct: 460 YGKDGVRFYTQTKTVTS-RW 478
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 6e-56
Identities = 100/343 (29%), Positives = 175/343 (51%), Gaps = 18/343 (5%)
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
LGV+ AI +N+P + + + + A+ + N +V+K SE S Y I L G P
Sbjct: 140 LGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLS-ALYLADI---LYEAGLP 195
Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
++ V+TG E + L+++ VD + F G +G+ I A LELGG D
Sbjct: 196 PQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPL 253
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV +D D+ A +AV+ + ++SGQ C +R V + F + + ++ G P+
Sbjct: 254 IVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
DMG + + + VN+A+ +GA +L G++ +GA+ + PTV+ V+
Sbjct: 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLL----GNVRDGAL---YAPTVLDRVDP 366
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485
+M L++EE FGP+ P+++F ++ ++++N + YGL V + A++Q G
Sbjct: 367 SMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTV 426
Query: 486 AINDFASNYMCQSLPFGGVKDSGFGRFAGV-EGLRACCLVKSV 527
+ + Y + PFGG+KDSG G GV E +++ +K+
Sbjct: 427 NVWE-VPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTY 468
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 7e-56
Identities = 133/458 (29%), Positives = 217/458 (47%), Gaps = 24/458 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
PAT + LG + A++D +A AR+A + W++ + R + LR L + H E +
Sbjct: 22 PATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT-ALRVRCLRQLRDALRAHVEEL 80
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVEF 186
E++ + G + + ++ + + + L+E W + + I + +
Sbjct: 81 RELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAW-TTDLGVASPMGIPTRRTLRR 139
Query: 187 HPLGVVGAIVSWNYPFHNI----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
+GVVGAI WN+P H I P LAA GN +V+K + + W +I
Sbjct: 140 EAVGVVGAITPWNFP-HQINLAKLGPALAA---GNTVVLKPAPDTPWCAAVLGELIAEH- 194
Query: 243 AAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
P +V+++T AL++ VD + F GS GR +M +A+ TL V LEL
Sbjct: 195 --TDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLEL 252
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GGK AFIV DD D+ +A +GQ CA R V R Y V+ A + S+
Sbjct: 253 GGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAAATMGSI 312
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G P G + +++Q+ ++ A+ +G G G ++ + PTV
Sbjct: 313 KPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGG--GRPADRDRGFFVEPTV 370
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
I +++ ++ +EE FGP++ ++ + D++ V++ANDS YGL VF RA +AA+
Sbjct: 371 IAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAAR 430
Query: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG 517
++ G +N + PFGG K SG GR GV G
Sbjct: 431 VRTGTVNVN--GGVWYSADAPFGGYKQSGIGREMGVAG 466
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 1e-55
Identities = 120/443 (27%), Positives = 194/443 (43%), Gaps = 47/443 (10%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146
+VD VA AR A WA S ++R LR + + ++E + + SR+TGK + +A
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QT 59
Query: 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
E+ KI + E M +A + P GV+ +N+P H
Sbjct: 60 EVAAMAGKIDISIKAYH-----ERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLP 114
Query: 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 265
++ A+ +GN +V K SE + + A G P +++++ G ETGEAL
Sbjct: 115 NGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEA----GLPPGVLNLVQGGRETGEAL 170
Query: 266 VSS--VDKIIFVGSPGVGRMIMR----NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
+ +D ++F GS G ++ R K L LE+GG + +V D D+ A +
Sbjct: 171 AAHEGIDGLLFTGSAATGLLLHRQFAGRPGKIL---ALEMGGNNPLVVWDVADIDAAAYL 227
Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 378
V++A ++GQ C A R V F+ ++ + K + G P A MG L +
Sbjct: 228 IVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAA 287
Query: 379 HSEKLQNLVNDALDKGAEIL-------ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 431
+ + D L G E L A +F LS G +D V +
Sbjct: 288 AAARYLLAQQDLLALGGEPLLAMERLVAGTAF--LSPGIID----------VTDAADVPD 335
Query: 432 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN--- 488
EE FGP++ + +++ +E + LAN +R+GL + S + A+I+ G+ N
Sbjct: 336 EEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPT 395
Query: 489 DFASNYMCQSLPFGGVKDSGFGR 511
AS+ + PFGGV SG R
Sbjct: 396 TGASS----TAPFGGVGLSGNHR 414
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 192 bits (488), Expect = 2e-54
Identities = 129/452 (28%), Positives = 218/452 (48%), Gaps = 29/452 (6%)
Query: 70 EPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
+P T L ++D V+ AR + W+ SS +R+ L L + H E
Sbjct: 41 DPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEE 100
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + DTGK + + +I I W +K + E ++ H+ A +
Sbjct: 101 LALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDK-VYGEVATTSS---HELAMIVRE 156
Query: 188 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
P+GV+ AIV WN+P P LAA GN +++K SE + S + + A
Sbjct: 157 PVGVIAAIVPWNFPLLLTCWKLGPALAA---GNSVILKPSEKSPLSAIRLAGLAKEA--- 210
Query: 245 VGAPENLVDVITGFA-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 300
G P+ +++V+TGF E G+AL + +D I F GS G+ ++++A + + V LE G
Sbjct: 211 -GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAG 269
Query: 301 GKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GK A IV D D+ A + GQ C R + I F++ + + ++
Sbjct: 270 GKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNW 329
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G PL MG L H++ + + + + KG +L + G + PT+
Sbjct: 330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAA------AIGPTI 383
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
V+V+ L +EE FGP++ + +F ++E+ ++LANDS+YGLG AV++ RA ++ +
Sbjct: 384 FVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRR 443
Query: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 511
++ G +N++ M ++PFGG K SG GR
Sbjct: 444 LKAGSVFVNNYNDGDM--TVPFGGYKQSGNGR 473
|
Length = 494 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 1e-52
Identities = 139/482 (28%), Positives = 228/482 (47%), Gaps = 52/482 (10%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELI 128
P + + +VD VA A++A + W K + + R + + L + EHQE +
Sbjct: 28 PTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEEL 87
Query: 129 CEISSRDTG-------KTMVDASLGEIMTT------CEKITWLLSEGEKWLKPEYRSSGR 175
I S D+G KT V S I T C+KI +G+ + R +
Sbjct: 88 ATIESLDSGAVYTLALKTHVGMS---IQTFRYFAGWCDKI-----QGKTIPINQARPNRN 139
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ K+ P+GV G ++ WNYP + M A + +GN +V+K ++ + +
Sbjct: 140 LTLTKR-----EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKF- 193
Query: 236 RIIQAALAA-VGAPENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRNASKT 291
A L G P+ +++++ G G+ L D K+ F GS +G+ IM++ + +
Sbjct: 194 ----AELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVS 249
Query: 292 -LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 350
L V+LELGGK I+ D D+ ++ + + + G+NC A R +V I+ FV
Sbjct: 250 NLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVR 309
Query: 351 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 410
+V + VK + G PL D G H +KL + +GA ++ G
Sbjct: 310 RVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGK-------Q 362
Query: 411 VDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAV 465
VD+ +F PTV +V M + +EE+FGPIM I KF+ + V++ AND+ YGL V
Sbjct: 363 VDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGV 422
Query: 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525
F+ ++A ++ +++ G +N + N + PFGG K SGFG+ G E L K
Sbjct: 423 FTKDINKALYVSDKLEAGTVFVNTY--NKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTK 480
Query: 526 SV 527
+V
Sbjct: 481 TV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 3e-51
Identities = 137/473 (28%), Positives = 221/473 (46%), Gaps = 36/473 (7%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
Y PAT + + S +VD V A A W +++ K R + L L I E+ ++
Sbjct: 21 YNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRSSGRSMIH 179
E+ SR+ GK + EI + + L+ GE Y SMI
Sbjct: 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGE------YLEGHTSMIR 134
Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
+ PLGVV +I WNYP + A+ +GN +V+K SE +
Sbjct: 135 RD------PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA-LKL---- 183
Query: 240 AALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 296
A LA P +V+++ G +T G+ L V + GS G I+ + + ++
Sbjct: 184 AELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTH 243
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
+ELGGK IV DD D+ V + ++GQ+C A R Y R IY V ++ V
Sbjct: 244 MELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAV 303
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
++ +G P ++G L L H E++ V +A G + G G +G YF
Sbjct: 304 ATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITG--GEKRKGN-GYYFA 360
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476
PT++ ++Q+E FGP++ I F+ +E+VV ANDS+YGL +V++ RA +
Sbjct: 361 PTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRL 420
Query: 477 AAQIQCGVAAINDFASNYMCQS-LPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
+A++Q G +N +++M S +P GG K SG+G+ + GL +V+ ++
Sbjct: 421 SARLQYGCTWVN---THFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 172 bits (439), Expect = 3e-47
Identities = 124/478 (25%), Positives = 207/478 (43%), Gaps = 56/478 (11%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G +E K+ PA + +G ++ ++ + A +A + W K S + R R
Sbjct: 43 GERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRA---R 99
Query: 116 ILLK---YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS 172
ILL+ I + ++ GK +A + T E I +L EY
Sbjct: 100 ILLRAAAIIRRRKHEFSAWLVKEAGKPWAEAD-AD---TAEAIDFL----------EY-- 143
Query: 173 SGRSMIHKKAKVE------------FHPLGVVGAIVSWNYPFHNIFNPM-LAAVFSGNGI 219
R M+ + PLGV I WN+PF I M LAA+ +GN +
Sbjct: 144 YARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPF-AIMAGMTLAAIVAGNTV 202
Query: 220 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSSVDK--IIFVG 276
++K + + + +++ A G P +V+ + G +E G+ LV I F G
Sbjct: 203 LLKPASDTPVIAAKFVEVLEEA----GLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTG 258
Query: 277 SPGVGRMIMRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ 330
S VG I A+K L V E+GGKDA +V +D D+ A+ V +A SGQ
Sbjct: 259 SREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQ 318
Query: 331 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 390
C+ R VH D+Y + +V ++ K ++ G P Y MG + ++ + +
Sbjct: 319 KCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAY-MGPVI----NQASFDKIMSY 373
Query: 391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEV 450
++ G E R G + + + PT+ +V+ ++MQEE FGP++ +K +
Sbjct: 374 IEIGKE-EGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHA 432
Query: 451 VKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSG 508
+++AN++ YGL AV S ++ + + G N + + PFGG SG
Sbjct: 433 LEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 171 bits (434), Expect = 1e-46
Identities = 137/481 (28%), Positives = 217/481 (45%), Gaps = 30/481 (6%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
RT S V P+T K A ++ EV++ + A+ AQK WAK+ +R + L
Sbjct: 25 RTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKA 84
Query: 118 LKYIIEHQELICEISSRDTGKTMVDA------SLGEIMTTCEKITWLLSEGEKWLKPEYR 171
+ EH+ I E ++ K DA S I T E+ +L EG+ + +
Sbjct: 85 AAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFP 144
Query: 172 SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 231
+ R+ +K+ PLGVV AI +NYP + + + A+ +GN +V+K + +
Sbjct: 145 GNERNKYCLTSKI---PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAA 201
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288
++ A G P+ L+ +TG +E G+ L V+ I F G G I + A
Sbjct: 202 ---LHMVHCFHLA-GFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGD-TGIAISKKA 256
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
+ P+ +ELGGKDA IV +D D+ A ++ SGQ C + V +
Sbjct: 257 G--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADAL 314
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
V +V V ++ GPP D+ + + ++ LV DA +KGA
Sbjct: 315 VEKVNAKVAKLTVGPP-EDDCDITPVVSESSANFIEGLVMDAKEKGATF-------CQEW 366
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL-GCAVFS 467
P ++ NV M++ EE FGP++P+++ N+ EE + N S +GL GC VF+
Sbjct: 367 KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC-VFT 425
Query: 468 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
++A I+ ++ G IN A PF G+KDSG G + VKS
Sbjct: 426 RDINKAILISDAMETGTVQINS-APARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKST 484
Query: 528 V 528
V
Sbjct: 485 V 485
|
Length = 496 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 1e-45
Identities = 122/478 (25%), Positives = 206/478 (43%), Gaps = 56/478 (11%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
V PA + + + + + + A++A K W +R + +R + +
Sbjct: 10 GGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDAL 69
Query: 122 IEHQELICEISSRDTGKTMVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ +E + ++ S + GK + + LGE+ + C+ L + P R G M+
Sbjct: 70 RKKKEALGKLVSLEMGKILPEG-LGEVQEMIDICDFAVGLSRQLYGLTIPSERP-GHRMM 127
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
+ ++PLGVVG I ++N+P ++ N +A V GN +V K S + +
Sbjct: 128 EQ-----WNPLGVVGVITAFNFPV-AVWGWNAAIALV-CGNVVVWKPSPTTPLTAIAVTK 180
Query: 237 IIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 294
I+ L G P + ++ G A+ GEALV V + F GS VGR + + +
Sbjct: 181 IVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGR 240
Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
LELGG +A IV +D D+ + + AA+ ++GQ C R VH IY + ++ K
Sbjct: 241 SLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK 300
Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK----GAEILARGSFGHLSEGA 410
K V G PL +G L H++ + A+++ G +L FG
Sbjct: 301 AYKQVRIGDPLDDGTLVGPL----HTKAAVDNYLAAIEEAKSQGGTVL----FGGKVIDG 352
Query: 411 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 470
Y PT IV +++EE F PI+ ++KF+T EE + N+ GL ++F+
Sbjct: 353 PGNYVEPT-IVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDL 411
Query: 471 HRAREI-----AAQIQCGVAAINDFASNYMCQSLP---------FGGVKDSGFGRFAG 514
R CG+ +N + FGG K++G GR +G
Sbjct: 412 ---RNAFRWLGPKGSDCGIVNVN----------IGTSGAEIGGAFGGEKETGGGRESG 456
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 4e-43
Identities = 126/449 (28%), Positives = 211/449 (46%), Gaps = 29/449 (6%)
Query: 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 194
D GK +++S+ E+ I L + + W+ PE + + A++ PLGVV
Sbjct: 59 DLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLV 118
Query: 195 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 254
I +WNYPF +P++ A+ +GN +V+K SE A S ++++ L + + V V
Sbjct: 119 ISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDS-----SAVRV 173
Query: 255 ITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 313
+ G ET L DKI + GS +GR+IM A+K LTPV LELGGK +V D D+
Sbjct: 174 VEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDL 233
Query: 314 P-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 372
V +I ++GQ C + ++ + + K +++ P+ K DM
Sbjct: 234 KVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESK-DMS 292
Query: 373 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVNHTMKL 429
+ H ++L L+++ E+ + +G G D+ PT++++V +
Sbjct: 293 RIVNSTHFDRLSKLLDE-----KEVSDKIVYG----GEKDRENLKIAPTILLDVPLDSLI 343
Query: 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 489
M EE FGP++PI+ N EE + L +F+ ++ AA + G +ND
Sbjct: 344 MSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVND 403
Query: 490 FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVA 549
A + +LPFGGV +SG G + G A K+V+ Y ++YP
Sbjct: 404 IAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVL------YRSLFGDSAVRYPPY 457
Query: 550 ENGFEFQESLVEALYGLNIWDRLRALVNV 578
G + L++AL NI+D + L+ +
Sbjct: 458 SRG---KLRLLKALVDSNIFDIFKVLLGL 483
|
Length = 484 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 2e-42
Identities = 120/470 (25%), Positives = 205/470 (43%), Gaps = 27/470 (5%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G ++E K+ P + +G S+ + + A KA + W K+ ++R L
Sbjct: 39 GERVETENKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEERAAILF 98
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
+ + + ++ GK +A E I ++ + ++
Sbjct: 99 KAAAIVRRRRHEFSALLVKEVGKPWNEAD----AEVAEAIDFMEYYARQMIELAKGKPVN 154
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
S + + + P GV I WN+PF + +A + +GN +V+K +E A +
Sbjct: 155 SREGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFV 214
Query: 236 RIIQAALAAVGAPENLVDVITGF-AETGEALVSSVDK--IIFVGSPGVGRMIMRNASKT- 291
I++ A G P+ +V + G +E G+ LV I F GS VG I A+K
Sbjct: 215 EILEEA----GLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQ 270
Query: 292 -----LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA 346
L V E+GGKD IV +D D+ AQ A +A +GQ C+ R VH +Y
Sbjct: 271 PGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYD 330
Query: 347 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE--ILARGSFG 404
V + +I +S+ GPP + +G + +K N + + ++ G L G G
Sbjct: 331 EVVERFVEITESLKVGPPDSADVYVGPVI----DQKSFNKIMEYIEIGKAEGRLVSGGCG 386
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464
S+G + PT+ +V+ +L QEE FGP++ ++ + +E +++AN++ YGL
Sbjct: 387 DDSKG---YFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGG 443
Query: 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
V S ++ A+ + G N + + PFGG K SG AG
Sbjct: 444 VISNNRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAG 493
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 1e-41
Identities = 134/493 (27%), Positives = 204/493 (41%), Gaps = 51/493 (10%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY- 120
S T + PAT + S EVD VA AR+ W ++S QR +LL+Y
Sbjct: 14 SGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTS---VLLRYQ 70
Query: 121 --IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ EH++ I E+ + + GKT DA LG++ E + +
Sbjct: 71 ALLKEHRDEIAELITAEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKGETSTQVATRVD 129
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
+ PLGV I +N+P A+ GN V+K SE + +
Sbjct: 130 VYSIR---QPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELF 186
Query: 239 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 296
A GAP+ +++V+ G E + L+ V + FVGS +GR I S V
Sbjct: 187 SEA----GAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQ 242
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
G K+ +V D D A V AA ++GQ C A+ V + V
Sbjct: 243 ALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS--------AAVLVGAADEWV 294
Query: 357 -------KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 409
+ + GP +MG L + +++ +L+ +GAE+L G G+ +G
Sbjct: 295 PEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGR-GYKVDG 353
Query: 410 AVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
+ + PT++ V TMK QEE FGP++ +++ +T EE + L N S YG G A+F+
Sbjct: 354 YEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTR 413
Query: 469 SQHRAREIAAQIQCGVAAIN-------DFASNYMCQSLPFGGVKDSGFG--RFAGVEGLR 519
AR +I+ G +N + S F G KDS FG G +G
Sbjct: 414 DGAAARRFQHEIEVGQVGVNVPIPVPLPYFS--------FTGWKDSFFGDHHIYGKQGTH 465
Query: 520 ACCLVKSVVEDRW 532
K V RW
Sbjct: 466 FYTRGK-TVTTRW 477
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 4e-40
Identities = 111/468 (23%), Positives = 184/468 (39%), Gaps = 31/468 (6%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
E V A + +G +AE + + A A K W + R + L +
Sbjct: 31 KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLL 90
Query: 122 IEHQELICEISSRDTGKTMVDAS--LGEIMTTCE--KITWLLSEGEKWLKPEYRSSGRSM 177
+ + + + GK V+A + E + L Y
Sbjct: 91 RRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNES 150
Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 237
+ LG I WN+P ++A V GN ++ K +E+A G F I
Sbjct: 151 FYV-------GLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEI 203
Query: 238 IQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK---- 290
A G P +V + G E G L + I F GS G+ I A++
Sbjct: 204 FHEA----GFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPG 259
Query: 291 --TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
+ +E GGK+A IV + D V + V +A GQ C+ A R + + Y
Sbjct: 260 QTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPV 319
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
+ ++ K + +S GPP D+G + E K+ + + ++G +++ G E
Sbjct: 320 LERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGK---RLE 375
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVF 466
G + PTV+ V ++ QEE FGP++ ++++ D+ E +++AN + YGL V+
Sbjct: 376 G-EGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434
Query: 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
S + E + G IN + + PFGG K SG G
Sbjct: 435 SRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 6e-39
Identities = 117/515 (22%), Positives = 204/515 (39%), Gaps = 48/515 (9%)
Query: 19 FLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG 78
F+ + VP + + D + I T E + +G
Sbjct: 5 FVNRIFDLEVPLEALADALKAFDEKEWEAIPII---NGEETETGEGAPVIDPADHERTIG 61
Query: 79 YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ-ELICEISSRDTG 137
+VD +A A A W+ + ++R + L + ++ ELI +++ + G
Sbjct: 62 EVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIA-LAAAEAG 120
Query: 138 KTMVDASLGEIMTTCEKITWL-----LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVV 192
KT+ DA E+ E I + + +G + +E H GV
Sbjct: 121 KTLADA-DAEVR---EAIDFCRYYAAQARELFSDPELPGPTG-----ELNGLELHGRGVF 171
Query: 193 GAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 251
I WN+P IF + AA+ +GN ++ K +E R ++ A G P ++
Sbjct: 172 VCISPWNFPL-AIFTGQIAAALAAGNTVIAKPAEQTPLIAA---RAVELLHEA-GVPRDV 226
Query: 252 VDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMR---NASKTLTPVTLELGGKDAF 305
+ ++ G E GEALV+ +D +IF GS ++I R + P+ E GGK+A
Sbjct: 227 LQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAM 286
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV + V++A S+GQ C+ Y+ +I F+ + + S+ G P
Sbjct: 287 IVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPW 346
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ----YFPPTVIV 421
D+G L + L+ L RG ++ +D + P +I
Sbjct: 347 DLSTDVGPLIDKPAGKLLRAHTE---------LMRGEAWLIAPAPLDDGNGYFVAPGIIE 397
Query: 422 NVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
V + + E FGPI+ +++F + +E ++ N + YGL + S + +
Sbjct: 398 IVG--IFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRER 455
Query: 480 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
++ G IN + + PFGG SG G AG
Sbjct: 456 VEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAG 490
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 2e-36
Identities = 111/444 (25%), Positives = 205/444 (46%), Gaps = 52/444 (11%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK------T 139
A+VD V AR A WA+ SF++R+ + + E++E + E+ +R+TGK T
Sbjct: 37 AQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAAT 96
Query: 140 MVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 196
V A + +I + + T GEK M A + P GVV
Sbjct: 97 EVTAMINKIAISIQAYHERT-----GEK---------RSEMADGAAVLRHRPHGVVAVFG 142
Query: 197 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256
+N+P H ++ A+ +GN +V K SE W ++ Q A G P +++++
Sbjct: 143 PYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQA----GLPAGVLNLVQ 198
Query: 257 GFAETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCDDVDV 313
G ETG+AL + +D ++F GS G ++ R A + + LE+GG + ++ + D+
Sbjct: 199 GGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADI 258
Query: 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYD-- 370
+ +++A S+GQ C A R V + F++++ + K ++ G A +
Sbjct: 259 DAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDA---EPQ 315
Query: 371 --MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 428
MGA+ + ++ L L G + L +++ I++V +
Sbjct: 316 PFMGAVISEQAAQGLVAAQAQLLALGGKSLL-----EMTQLQAGTGLLTPGIIDVTGVAE 370
Query: 429 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA--- 485
L EE FGP++ +++++ +E ++LAN++R+GL + S + + +I+ G+
Sbjct: 371 LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWN 430
Query: 486 -AINDFASNYMCQSLPFGGVKDSG 508
+ +S + PFGGV SG
Sbjct: 431 KPLTGASS-----AAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 9e-36
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 418 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 477
TV+V+V+ M + QEE FGP++P+++F +EE + LAND+ YGL VF+ +RA +A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 478 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 529
+++ G IND + PFGGVK+SG GR G GL K+VV
Sbjct: 317 ERLRAGTVYINDSSIGVG-PEAPFGGVKNSGIGREGGPYGLEEYTRTKTVVI 367
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 4e-33
Identities = 123/480 (25%), Positives = 215/480 (44%), Gaps = 57/480 (11%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I + R Q E+ PAT + L A S A+V+ VA AR A WA+ S ++R
Sbjct: 2 FIDGKWRAGQGES-FSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERI 60
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR 171
++ + E +E + + +R+TGK + + E+ + K+ +S +K +
Sbjct: 61 AVVQRFAALLEERKEALARVIARETGKPLWET-RTEVASMIGKVA--IS-----IKAYHE 112
Query: 172 SSGRS---MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
+G S M +A + P GVV +N+P H ++ A+ +GN +V K SE
Sbjct: 113 RTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTP 172
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286
W ++ + A G P +++++ G ETG AL + +D ++F GS G ++ R
Sbjct: 173 WVAEETVKLWEKA----GLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHR 228
Query: 287 NAS----KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+ K L LE+GG + IV + D+ + +++A S+GQ C A R V
Sbjct: 229 QFAGRPEKILA---LEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPD 285
Query: 343 D-----IYALFVSQVAKIVKSVSAGPPLAGKYD------MGALCLLEHSEKLQNLVNDAL 391
A V ++ G +D MGA+ L+ +++L L
Sbjct: 286 GAQGDAFLARLVEVAERLT---------VGAWDAEPQPFMGAVISLQAAQRLLAAQAKLL 336
Query: 392 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 451
G + L L GA I++V +L EE FGP++ +++++ +E +
Sbjct: 337 ALGGKSLLA--MRQLDPGAA---LLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAI 391
Query: 452 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN---DFASNYMCQSLPFGGVKDSG 508
+AN++R+GL + S + +I+ G+ N AS+ + PFGG+ SG
Sbjct: 392 AIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASS----AAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 1e-30
Identities = 115/427 (26%), Positives = 193/427 (45%), Gaps = 26/427 (6%)
Query: 98 AQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA--SLGEIMTTCEKI 155
A K+W + +R + +R + + + + + S + GK + + + EI+ C+
Sbjct: 68 AAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFA 127
Query: 156 TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI-FNPMLAAVF 214
L + + P R + H +V ++PLG+VG I ++N+P + +N +A V
Sbjct: 128 VGLSRQLNGSIIPSERPN-----HMMMEV-WNPLGIVGVITAFNFPCAVLGWNACIALV- 180
Query: 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALV--SSVDKI 272
GN +V K + +++ L P + G AE GEA+ + + +
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLV 240
Query: 273 IFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 332
F GS VG M+ + + LEL G +A IV DD D+ + + AA+ ++GQ C
Sbjct: 241 SFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRC 300
Query: 333 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392
R +H IY + Q+ + K V G PL +G L E + + +
Sbjct: 301 TTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS 360
Query: 393 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 452
+G +IL GS SEG + PT IV ++ +++EE FGP++ +MKF T EE ++
Sbjct: 361 QGGKILTGGSAIE-SEG---NFVQPT-IVEISPDADVVKEELFGPVLYVMKFKTLEEAIE 415
Query: 453 LANDSRYGLGCAVFSGSQHRAREIAAQI-----QCGVAAINDFASNYMCQSLPFGGVKDS 507
+ N GL ++F+ I I CG+ +N +N FGG K +
Sbjct: 416 INNSVPQGLSSSIFT---RNPETIFKWIGPLGSDCGIVNVN-IPTNGAEIGGAFGGEKAT 471
Query: 508 GFGRFAG 514
G GR AG
Sbjct: 472 GGGREAG 478
|
Length = 508 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 1e-27
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 20/328 (6%)
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GVV AI ++N+P + I + + A+ +G +++K + S + ++ A G
Sbjct: 124 PIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA----GL 179
Query: 248 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
PE + E LV+ V F+GS VG M+ + T LE GG
Sbjct: 180 PEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-TRCALEHGGAAPV 238
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV D+ + V+ +GQ C +R +V +I F ++A + + G P
Sbjct: 239 IVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPT 298
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
++G L ++++ VN+A+ GA +L G LS D + PTV+++
Sbjct: 299 DPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGK--RLS----DTTYAPTVLLDPPR 352
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485
K+ +E FGP++ + ++ +E + AN AVF+ A + ++
Sbjct: 353 DAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAV 412
Query: 486 AIND---FASNYMCQSLPFGGVKDSGFG 510
+ND F ++M PF G + SG+G
Sbjct: 413 MVNDHTAFRVDWM----PFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 112 bits (280), Expect = 6e-26
Identities = 109/440 (24%), Positives = 191/440 (43%), Gaps = 31/440 (7%)
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
QS + + PAT + + P + E V+ A++A +W + R+ R++LK+
Sbjct: 126 QSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQ---RVMLKF 182
Query: 121 IIEHQELICEISSR-------DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS 173
QELI + + + GKT+ D S G+I E + + EY +
Sbjct: 183 ----QELIRKNMDKLAMNITTEQGKTLKD-SHGDIFRGLEVVEHACGMATLQMG-EYLPN 236
Query: 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233
+ + + E PLGV I +N+P AV GN ++K SE +
Sbjct: 237 VSNGVDTYSIRE--PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAS-- 292
Query: 234 YFRIIQAALA-AVGAPENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASK 290
+I A LA G P+ +++++ G +T A+ D + FVGS G I A+
Sbjct: 293 ---VILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349
Query: 291 TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI--YALF 348
+ +G K+ +V D ++ + A ++GQ C D +
Sbjct: 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDK 409
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
+ + AK +K P A D+G + + E++ L+ +D GA++L G +
Sbjct: 410 LVERAKALKVTCGSEPDA---DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPG 466
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
+ PT++ V M+ +EE FGP++ M+ N+ +E + + N ++YG G A+F+
Sbjct: 467 YEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTS 526
Query: 469 SQHRAREIAAQIQCGVAAIN 488
S AR+ I+ G IN
Sbjct: 527 SGAAARKFQMDIEAGQIGIN 546
|
Length = 604 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 7e-26
Identities = 102/446 (22%), Positives = 177/446 (39%), Gaps = 31/446 (6%)
Query: 77 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 136
+G + A V + A++A W + K+R L L + H + + R+
Sbjct: 65 VGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREA 124
Query: 137 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 196
GKT+ +A I E + + R + + + GV I
Sbjct: 125 GKTIHNA----IAEVREAVDFC------------RYYAKQVRDVLGEFSVESRGVFVCIS 168
Query: 197 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256
WN+P + AA+ +GN ++ K +E S ++Q A G P + ++
Sbjct: 169 PWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEA----GFPAGTIQLLP 224
Query: 257 GFAET-GEALVS--SVDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGGKDAFIVCDD 310
G G AL S + + F GS V ++I + A + PV L E GG++A IV
Sbjct: 225 GRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDST 284
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 370
V + +R+A S+GQ C+ V D+ ++ + ++ + G P D
Sbjct: 285 ALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTD 344
Query: 371 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 430
+G + E + L + +I A+ + + PT+ ++ +L
Sbjct: 345 VGPVIDAEAKQNLLAHIEHMSQTQKKI-AQLTLDDSRACQHGTFVAPTLF-ELDDIAEL- 401
Query: 431 QEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488
EE FGP++ ++++ E ++V N + YGL V S + R I + G +N
Sbjct: 402 SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVN 461
Query: 489 DFASNYMCQSLPFGGVKDSGFGRFAG 514
+ PFGG SG G AG
Sbjct: 462 RNQVGAVVGVQPFGGQGLSGTGPKAG 487
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 6e-25
Identities = 127/493 (25%), Positives = 211/493 (42%), Gaps = 81/493 (16%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQ-FLRI 116
RT + +V ++ A L + A V++ + A +A+K WA+ F+ R FL+
Sbjct: 43 RTGNTGKQVMPHDHA--HVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKA 100
Query: 117 --LL--KYIIEHQELICEISSRDT---------GKTMVDASLGEIMTTCEKITWL---LS 160
LL KY R GK + A EI CE I +L +
Sbjct: 101 ADLLSGKY-------------RYELNAATMLGQGKNVWQA---EIDAACELIDFLRFNVK 144
Query: 161 EGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNI-FNPMLAAVFSGNG 218
E+ + SS + ++ +E+ PL G V A+ +N F I N A GN
Sbjct: 145 YAEELYAQQPLSSPAGVWNR---LEYRPLEGFVYAVSPFN--FTAIGGNLAGAPALMGNV 199
Query: 219 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSSVD--KIIFV 275
++ K S+ A S ++I++ A G P +++ + G G+ +++S + F
Sbjct: 200 VLWKPSDTAVLSNYLVYKILEEA----GLPPGVINFVPGDGPVVGDTVLASPHLAGLHFT 255
Query: 276 GSPGVGRMIMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329
GS + + + +T + E GGK+ +V DV + VR A + G
Sbjct: 256 GSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQG 315
Query: 330 QNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389
Q C+ A R YV ++ ++ + +K + G P MGA+ + ++++ ++
Sbjct: 316 QKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDH 375
Query: 390 A-LDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
A D AEI+A G S G YF PTVI + KLM EE FGP++ + +
Sbjct: 376 AKSDPEAEIIAGGKCDD-SVG----YFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDS 430
Query: 448 --EEVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM--CQSL--- 499
EE ++L + S Y L A+F A++ A I+ A+ + A N+ +
Sbjct: 431 DFEETLELVDTTSPYALTGAIF------AQDRKA-IREATDALRNAAGNFYINDKPTGAV 483
Query: 500 ----PFGGVKDSG 508
PFGG + SG
Sbjct: 484 VGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-22
Identities = 102/447 (22%), Positives = 182/447 (40%), Gaps = 37/447 (8%)
Query: 78 GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG 137
G + A+V++ + A A +W+ + +R L + + + R+ G
Sbjct: 142 GTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAG 201
Query: 138 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
KT+ +A I E + +L ++ + R + PLG V I
Sbjct: 202 KTLSNA----IAEVREAVDFL-----RYYAGQAR-------DTFGNLTHRPLGPVVCISP 245
Query: 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257
WN+P + AA+ +GN ++ K +E R++ A G P ++ ++ G
Sbjct: 246 WNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEA----GVPPGVLQLLPG 301
Query: 258 FAET-GEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGGKDAFIVCDDV 311
ET G AL + V ++F GS V R+I R A + P+ L E GG++A IV
Sbjct: 302 RGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSA 361
Query: 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371
V + +A S+GQ C+ + D+ ++ + + + G P D+
Sbjct: 362 LAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDV 421
Query: 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV--NVNHTMKL 429
G + E ++ + KG + + L +G + PT+I N++
Sbjct: 422 GPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGT---FVAPTLIELENLDE---- 474
Query: 430 MQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487
+Q E FGP++ ++++ D +EV+ N + YGL V + + + G +
Sbjct: 475 LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYV 534
Query: 488 NDFASNYMCQSLPFGGVKDSGFGRFAG 514
N + PFGG SG G AG
Sbjct: 535 NRNIVGAVVGVQPFGGEGLSGTGPKAG 561
|
Length = 769 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 3e-20
Identities = 97/347 (27%), Positives = 152/347 (43%), Gaps = 34/347 (9%)
Query: 183 KVEFHPL-GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
+ E+ PL G V AI +N F I N A GN ++ K S+ A S RI++
Sbjct: 163 RTEYRPLEGFVYAISPFN--FTAIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEE 220
Query: 241 ALAAVGAPENLVDVITG-FAETGEALVSSVD--KIIFVGSPGV----GRMIMRNASK--T 291
A G P +++ + G + +++ D I F GS + + +N +
Sbjct: 221 A----GLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHN 276
Query: 292 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351
+ E GGKD +V DV HV +R A + GQ C+ R YV ++ F +
Sbjct: 277 FPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKGR 336
Query: 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA--EILARGSFGHLSEG 409
+ + V G P MGA+ + K+ + A + ILA G + S G
Sbjct: 337 LLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDD-SVG 395
Query: 410 AVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLA-NDSRYGLGCAV 465
YF PTV+ + + LM+EE FGP++ + + D +E++ L + + YGL AV
Sbjct: 396 ----YFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTGAV 451
Query: 466 FSGSQHRAREIAAQIQCGVAA----INDFASNYMCQSLPFGGVKDSG 508
F ++ R + A AA IND + + PFGG + SG
Sbjct: 452 F--AKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 93.7 bits (234), Expect = 7e-20
Identities = 101/438 (23%), Positives = 183/438 (41%), Gaps = 70/438 (15%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
+V++ +A AR A W+++ ++R L + ++ + + R+ GKT+ DA
Sbjct: 583 DAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDA 642
Query: 144 SLGEIMTTCEKITW----------LLSEGEKWLKP-----EYRSSGRSMIHKKAKVEFHP 188
+ E+ E + + L EK P E R GR
Sbjct: 643 -IAEVR---EAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGR------------- 685
Query: 189 LGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
GV I WN+P IF + AA+ +GN ++ K +E ++ A G
Sbjct: 686 -GVFVCISPWNFPL-AIFLGQVAAALAAGNTVIAKPAEQTPLIA---AEAVKLLHEA-GI 739
Query: 248 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGG 301
P++++ ++ G A G AL + + + F GS R+I R A++ V L E GG
Sbjct: 740 PKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGG 799
Query: 302 KDAFI---------VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
++A I V DDV V +A +S+GQ C+ +V DI + +
Sbjct: 800 QNAMIVDSTALPEQVVDDV---------VTSAFRSAGQRCSALRVLFVQEDIADRVIEML 850
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
+ + G P D+G + E L + + + + A +LA+ L G +
Sbjct: 851 KGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHI-ERMKREARLLAQLP---LPAGTEN 906
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQ 470
+F ++ + ++ E FGPI+ ++++ + +V+ N + YGL + S +
Sbjct: 907 GHFVAPTAFEIDS-ISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIE 965
Query: 471 HRAREIAAQIQCGVAAIN 488
A IA +++ G +N
Sbjct: 966 ETADRIADRVRVGNVYVN 983
|
Length = 1038 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 84.9 bits (211), Expect = 5e-17
Identities = 110/465 (23%), Positives = 192/465 (41%), Gaps = 85/465 (18%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
S +V+ +A A+ A W+ + +R L + H + ++ R+ GKT+ +A
Sbjct: 588 SAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANA 647
Query: 144 SLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200
+ E+ E + +L ++ + L PLG V I WN+
Sbjct: 648 -IAEVR---EAVDFLRYYAAQARRLLNGPGHK---------------PLGPVVCISPWNF 688
Query: 201 PFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALA-----AVGAPENLVDV 254
P IF +AA +GN ++ K +E +I AA A G P++ + +
Sbjct: 689 PL-AIFTGQIAAALVAGNTVLAKPAEQTP--------LI-AARAVRLLHEAGVPKDALQL 738
Query: 255 ITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT-PVTL--ELGGKDAFIVC 308
+ G T G ALV+ + ++F GS V R+I R +K PV L E GG++A IV
Sbjct: 739 LPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIV- 797
Query: 309 DDVDVP-HVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
D +P V + +A S+GQ C+ A R + D+ ++ + + + G P
Sbjct: 798 DSSALPEQVVADVIASAFDSAGQRCS-ALRVLCLQEDVADRVLTMLKGAMDELRIGDPWR 856
Query: 367 GKYDMG------AL-CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
D+G A + H E ++ ++ + +E + PT+
Sbjct: 857 LSTDVGPVIDAEAQANIEAHIEAMRAA--------GRLVHQLPLPAETEKGT--FVAPTL 906
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQHRAREIA 477
I ++ + ++ E FGP++ +++F DE V+ N + YGL + S +
Sbjct: 907 I-EIDS-ISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVT 964
Query: 478 AQIQCG--------VAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
++I+ G + A+ PFGG SG G AG
Sbjct: 965 SRIRAGNIYVNRNIIGAV--------VGVQPFGGEGLSGTGPKAG 1001
|
Length = 1208 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 76.9 bits (189), Expect = 7e-15
Identities = 70/375 (18%), Positives = 132/375 (35%), Gaps = 35/375 (9%)
Query: 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
A + K + + +R FL +++ + I + TGK I +
Sbjct: 8 ADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKG--WMFAENICGDQVQ 65
Query: 155 ITWLLSEGEKWLKP----EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210
+ + P + G ++ P G V I ++N+P +
Sbjct: 66 LRARAFVIYSYRIPHEPGNHLGQGLKQ---QSHGYRWPYGPVLVIGAFNFPLWIPLLQLA 122
Query: 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--S 268
A+ GN +++K S R++ A P V +I G +T +AL+ +
Sbjct: 123 GALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLL---PPEDVTLINGDGKTMQALLLHPN 179
Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD-VPHVAQIAVRAALQS 327
++F GS V + +A + + LEL G + ++ D V +VA V+
Sbjct: 180 PKMVLFTGSSRVAEKLALDAKQA--RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTAC 237
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
SGQ C +V + +V+ + A LA + L + ++
Sbjct: 238 SGQKCTAQSMLFVPEN------WSKTPLVEKLKA--LLARRKLEDLLLGPVQTFTTLAMI 289
Query: 388 NDA-LDKGAEILARGSFGHLSE-----GAVDQYFPPTVIVN--VNHTMKLMQEEAFGPIM 439
G+ +L G GA + + T +L+ EE FGP
Sbjct: 290 AHMENLLGSVLLFSGKELKNHSIPSIYGACVA--SALFVPIDEILKTYELVTEEIFGPFA 347
Query: 440 PIMKFNTDEEVVKLA 454
++++ D+ + L
Sbjct: 348 IVVEYKKDQLALVLE 362
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 1e-14
Identities = 91/419 (21%), Positives = 156/419 (37%), Gaps = 44/419 (10%)
Query: 87 EVDERVAQAR-KAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----- 140
+V VA AR +F +R + L+ L +Y+ E +E + +++ TG T
Sbjct: 37 DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYALAA-TTGATRRDNWV 95
Query: 141 -VDASLGEIMTTCEKITWLLSEGEKWLKPEY-----RSS--GRSMIHKKAKVEFHPLGVV 192
+D +G + T L + + E+ S GR ++ K V
Sbjct: 96 DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQ----- 150
Query: 193 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIK-VSENASWSGCFYFRIIQAALAAVGAPENL 251
I ++N+P + A +G + K + A + ++++ L PE
Sbjct: 151 --INAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLL----PEGS 204
Query: 252 VDVITGFAETGEAL--VSSVDKIIFVGSPGVGRMIMR--NASKTLTPVTLELGGKDAFIV 307
+ +I G A G+ L + D + F GS + N + E +A I+
Sbjct: 205 LQLICGSA--GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAIL 262
Query: 308 CDDV--DVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
+D D P A VR +GQ C R V + + + + + V G
Sbjct: 263 GEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLG 322
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 422
P DMG L LE ++ V L GAE+ G +GA +FPPT+++
Sbjct: 323 DPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGP--GRLDGA---FFPPTLLLA 377
Query: 423 VN-HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+ + EAFGP+ + E +LA L + + AR+ +
Sbjct: 378 EDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGL 436
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 4e-13
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
A VD+ VA A+ AQK + K + R + + + + ++ + E + E++ +TG V+ +
Sbjct: 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI 63
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
+ EK + G + L S + VE+ P GV+GAI P I
Sbjct: 64 AKNHLAAEK-----TPGTEDLTTTAWSGDNGL----TLVEYAPFGVIGAITPSTNPTETI 114
Query: 206 FN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI-TGFAET 261
N MLAA GN +V A + +I A+A G P+NLV + ET
Sbjct: 115 INNSISMLAA---GNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIET 171
Query: 262 GEALVS--SVDKIIFVGSPGVGRMIMRNASK 290
L++ ++ ++ G P V + + + K
Sbjct: 172 TNELMAHPDINLLVVTGGPAVVKAALSSGKK 202
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 1e-10
Identities = 95/360 (26%), Positives = 156/360 (43%), Gaps = 62/360 (17%)
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246
PLG V I WN+P IF +AA +GN ++ K +E RI+ A G
Sbjct: 768 PLGPVVCISPWNFPL-AIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEA----G 822
Query: 247 APENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTL------TPVTL 297
P +V ++ G ET G ALV+ V ++F GS V R++ RN + L P+
Sbjct: 823 VPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIA 882
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
E GG++A IV V + +A S+GQ C+ + D+ + K+++
Sbjct: 883 ETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDV----ADRTLKMLR 938
Query: 358 SVSAGPPLAGKYDMGAL--CLLEHSEKLQNLVNDALDKGAE------ILARGSFGH---- 405
GA+ C + + ++L + +D A+ I A + G
Sbjct: 939 --------------GAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQ 984
Query: 406 --LSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSR 458
Q + PPT+I ++ +L + E FGP++ ++++N ++ E+++ N S
Sbjct: 985 AARENSEDWQSGTFVPPTLI-ELDSFDEL-KREVFGPVLHVVRYNRNQLDELIEQINASG 1042
Query: 459 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL----PFGGVKDSGFGRFAG 514
YGL V + R E AQ+ N + + M ++ PFGG SG G AG
Sbjct: 1043 YGLTLGVHT----RIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAG 1098
|
Length = 1318 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
A VD+ VA A+ AQ+ + + S R++ + + + ++ H E + E++ +TG V+ +
Sbjct: 36 ASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI 95
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
+ + EK + G + L E + + +E+ P GV+GA+ P I
Sbjct: 96 AKNVAAAEK-----TPGVEDLTTEALTGDNGL----TLIEYAPFGVIGAVTPSTNPTETI 146
Query: 206 FN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI-TGFAET 261
N MLAA GN +V A ++ A+ A G PENLV + ET
Sbjct: 147 INNAISMLAA---GNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIET 203
Query: 262 GEALVS--SVDKIIFVGSPGVGRMIMRNASK 290
+ L+ + ++ G P V + M++ K
Sbjct: 204 AQRLMKHPGIALLVVTGGPAVVKAAMKSGKK 234
|
Length = 465 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 1e-08
Identities = 97/428 (22%), Positives = 165/428 (38%), Gaps = 56/428 (13%)
Query: 88 VDERVAQAR-KAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL- 145
VA AR K +F +R L+ L KY++E +E + +S+ TG T D+ +
Sbjct: 38 FAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYALSAA-TGATRRDSWID 96
Query: 146 --GEIMT--TCEKITWLLSEGEKWL---KPEYRSSGRSMIHKKAKVEFHPL----GVVGA 194
G I T + +L E S + + + H L GV
Sbjct: 97 IDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQ------HILTPRRGVAVH 150
Query: 195 IVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA---- 247
I ++N+P + F P L A G +++K + ++ + +A + +
Sbjct: 151 INAFNFPVWGMLEKFAPALLA---GVPVIVKPATATAY-------LTEAVVKDIVESGLL 200
Query: 248 PENLVDVITGFAETGEAL--VSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKD 303
PE + +I G G+ L + D + F GS + + + E +
Sbjct: 201 PEGALQLICG--SVGDLLDHLGEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLN 258
Query: 304 AFIVCDDV--DVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVK 357
A I+ D P R +GQ C R +V A+ + A++ K
Sbjct: 259 AAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAK 318
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---Y 414
V P L G MG L E E ++ V L AE++ G GA + +
Sbjct: 319 VVVGDPRLEGV-RMGPLVSREQREDVRAAV-ATLLAEAEVVFGGPDRFEVVGADAEKGAF 376
Query: 415 FPPTVIV--NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
FPPT+++ + + + EAFGP+ +M +++ E ++LA R L +V +
Sbjct: 377 FPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAF 436
Query: 473 AREIAAQI 480
ARE+
Sbjct: 437 ARELVLGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 66/275 (24%), Positives = 113/275 (41%), Gaps = 27/275 (9%)
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P G V I +N+P ++ A+F GN ++KV S + R+ L G
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRL----LHLCGM 197
Query: 248 PENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
P VD+I T ++ + +F GS V R A + V LE G D
Sbjct: 198 PATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAE---RLALELHGKVKLEDAGFDWK 254
Query: 306 IVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKI-----VKS 358
I+ DV DV +VA + A SGQ C+ + H + + A + ++ + ++
Sbjct: 255 ILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED 314
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS----FGHLSEGAVDQY 414
++ GP L + +L+H +KL + + G + L S +G AV
Sbjct: 315 LTIGPVLT--WTTER--ILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAV--- 367
Query: 415 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 449
F P + + +L+ E FGP + ++ ++
Sbjct: 368 FVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQL 402
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 2e-07
Identities = 96/420 (22%), Positives = 145/420 (34%), Gaps = 100/420 (23%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-G 146
VD A A A + + S +R FL + I + + + +TG + +A L G
Sbjct: 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETG--LPEARLQG 58
Query: 147 EIMTTCEKITW---LLSEGEKWL-----------KPEYRSSGRSMIHKKAKVEFHPLGVV 192
E+ T ++ L+ EG WL +P R R M PLG V
Sbjct: 59 ELGRTTGQLRLFADLVREGS-WLDARIDPADPDRQPLPRPDLRRM--------LVPLGPV 109
Query: 193 GAIVSWNYPFHNIFNPM-------LAAVFSGNGIVIK-------VSENASWSGCFYFRII 238
+ N+P F+ LAA G +V+K SE R I
Sbjct: 110 AVFGASNFPL--AFSVAGGDTASALAA---GCPVVVKAHPAHPGTSE-------LVARAI 157
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVSSVDKII----FVGSPGVGRMIMRNASKTLT 293
+AAL A G P + ++ G E G ALV I F GS GR + A+
Sbjct: 158 RAALRATGLPAGVFSLLQGGGREVGVALVK--HPAIKAVGFTGSRRGGRALFDAAAARPE 215
Query: 294 --PVTLELGGKDAFIVCDDVDVPHVAQIA---VRAALQSSGQNC---------AGAERFY 339
P ELG + + IA V + +GQ C AG
Sbjct: 216 PIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPA--- 272
Query: 340 VHRDIYALFVSQVAKIVKSVSAG----PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395
F++ +A+ + + A P +A Y G L G
Sbjct: 273 -----GDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEALAAA-------------PGV 314
Query: 396 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 455
+LA G+ A F + +QEE FGP +++++ E++ +A
Sbjct: 315 RVLAGGAAAEGGNQAAPTLFKVDAAAFLADP--ALQEEVFGPASLVVRYDDAAELLAVAE 372
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 8e-06
Identities = 93/445 (20%), Positives = 171/445 (38%), Gaps = 41/445 (9%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 162
++ QR L ++K + +++ +I++ ++G T D+++ G I T + G
Sbjct: 61 TYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALG 120
Query: 163 EKWLKP--EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220
+ L E G+ + V GV I ++N+P ++ A+ +G ++
Sbjct: 121 DARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVI 180
Query: 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGV 280
+K + +W R+++ +AA P + V+ G + + D + F GS
Sbjct: 181 VKPATATAW---LTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHLQPFDVVSFTGSAET 237
Query: 281 GRMIMRNAS--KTLTPVTLELGGKDAFIVCDDVDVPHVAQIA------VRAALQSSGQNC 332
++ + + + V +E ++ ++ D P VR SGQ C
Sbjct: 238 AAVLRSHPAVVQRSVRVNVEADSLNSALLGPD-AAPGSEAFDLFVKEVVREMTVKSGQKC 296
Query: 333 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392
R +V +Y +A + + G P MG L ++ + AL
Sbjct: 297 TAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGL-AALR 355
Query: 393 KGAEILARGSFGHL--SEGAVDQYFPPTVIV--NVNHTMKLMQEEAFGPIMPIMKFNTDE 448
AE+L G L ++ AV PT++ + + + E FGP+ ++ +
Sbjct: 356 AQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAA 415
Query: 449 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQ----------IQCGVAAINDFASNYMCQS 498
+ LA + L +V+S A + I VAA++ N M QS
Sbjct: 416 HALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQS 475
Query: 499 LPFGGVKDSGFGRFAGVE---GLRA 520
L G GR G E GLRA
Sbjct: 476 L------HGGPGRAGGGEELGGLRA 494
|
Length = 521 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 4e-05
Identities = 51/270 (18%), Positives = 98/270 (36%), Gaps = 31/270 (11%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD----- 142
+D+ VA A+ AQ+ + S + R + + + + +++ +TG V+
Sbjct: 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIK 60
Query: 143 ---ASLGEIMTTC-EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 198
A+ EK +L+ E + P+GVV +I
Sbjct: 61 NHFAAEYIYNVYKDEKTCGVLTGDENGG---------------TLIIAEPIGVVASITPS 105
Query: 199 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 258
P + L ++ + N I+ A ++ A A GAPENL+ I
Sbjct: 106 TNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNP 165
Query: 259 A-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315
+ E + L+ + ++ G P V ++ A + P G ++ + D+
Sbjct: 166 SIELAQRLMKFPGIGLLLATGGPAV----VKAAYSSGKPAIGVGAGNTPVVIDETADIKR 221
Query: 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
Q V++ +G CA + V +Y
Sbjct: 222 AVQSIVKSKTFDNGVICASEQSVIVVDSVY 251
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 6e-05
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 188 PLGVVGAIVSWNYPFHN-----IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GV+ A++ P N IF ++A + + N I+ A +I++ A
Sbjct: 95 PVGVIAALI----PSTNPTSTAIFKALIA-LKTRNAIIFSPHPRAKKCSIEAAKIMREAA 149
Query: 243 AAVGAPENLVDVIT 256
A GAPE L+ I
Sbjct: 150 VAAGAPEGLIQWIE 163
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 5e-04
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 11/184 (5%)
Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224
W KP+ ++ + K + P G+ I +P N + + A++ +GN +++K
Sbjct: 173 WEKPQGKNDPLKL---KKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPH 229
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE----ALVSSVDKIIFVGSPGV 280
A ++ + L G NLV + A +V I F GS
Sbjct: 230 PGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-IAVRAALQSSGQNCAGAERFY 339
G+ + +NA + V E G + I+ D + + +A +L SGQ C +
Sbjct: 290 GQWLEQNARQAQ--VYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLY-SGQMCTTTQAIL 346
Query: 340 VHRD 343
V RD
Sbjct: 347 VPRD 350
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388
GQ C R V R + + + + V G P MGAL LE E ++ V
Sbjct: 293 GQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKV- 351
Query: 389 DALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVN-------HTMKLMQEEAFGPI 438
AL AEI+ G GA + +FPPT++ + H + EAFGP+
Sbjct: 352 AALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDV-----EAFGPV 406
Query: 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486
+M ++ +E ++LA + L ++ + E+A ++ G A
Sbjct: 407 STLMPYDDLDEAIELAARGKGSLVASLVTAD----PEVARELVLGAAP 450
|
Length = 675 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 83/373 (22%), Positives = 137/373 (36%), Gaps = 73/373 (19%)
Query: 165 WLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222
W KP+ + +M + F P GV I +P N + + A++ +GN +++K
Sbjct: 173 WEKPQGKHDPLAM-----EKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVK 227
Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-------SVDKIIFV 275
A ++ + LA G NLV + A+T E ++ V I F
Sbjct: 228 PHPAAILPLAITVQVAREVLAEAGFDPNLVTLA---ADTPEEPIAQTLATRPEVRIIDFT 284
Query: 276 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 335
GS G + NA + V E G + +V D+ + + + SGQ C
Sbjct: 285 GSNAFGDWLEANARQAQ--VYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTP 342
Query: 336 ERFYVHRD---------IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
+ YV RD + + +A + + A P A +GA +Q+
Sbjct: 343 QNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGLLADPARAAAL-LGA---------IQS- 391
Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ----------EEAFG 436
D L + AE G SE FP + T L++ EE FG
Sbjct: 392 -PDTLARIAEARQLGEVLLASEAVAHPEFPDARV----RTPLLLKLDASDEAAYAEERFG 446
Query: 437 PIMPIMKFNTDEEVVKLANDS---RYGLGCAVFSGS-------QHRAREIAAQIQC---- 482
PI ++ ++ + ++LA +S + V+S Q A + +
Sbjct: 447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTG 506
Query: 483 GV-----AAINDF 490
GV AA +DF
Sbjct: 507 GVFVNQSAAFSDF 519
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.94 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.69 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.57 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.09 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.2 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 95.7 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 94.69 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 94.54 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 93.67 | |
| PLN02926 | 431 | histidinol dehydrogenase | 91.28 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 90.64 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 90.25 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 90.02 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 88.13 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 88.08 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 85.35 |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-127 Score=946.96 Aligned_cols=568 Identities=64% Similarity=1.050 Sum_probs=534.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhCCCCC-------CceeecCCCC--CCCCCCCCCCcccccCCcccCCCCCCeEEeecC
Q 007627 1 MAFLFSLIVLAFAYAICRFLLMLIPPNV-------PSIDVDASDV--LDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEP 71 (595)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~p~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P 71 (595)
|-+||.+.+++.+|+||++++...+... .++..+-|+. ++|..++.. -.++++...++||+|
T Consensus 1 ~~~~~~~~~~a~~~~i~~~~~~l~~p~~~s~~~~~~~~~~~~~~~~~n~~~~~~~~---------~~~~~~~~~vqCycP 71 (583)
T KOG2454|consen 1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPR---------GRSQQSDKKVQCYCP 71 (583)
T ss_pred CCchhHHHHHHHHHHHHHHHHhhcCCCCCccccCHHHhccCCCchhhcCeeecCCC---------CCCcCCCCceEEecC
Confidence 4579999999999999998866655544 4444555554 566655542 235667789999999
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhH
Q 007627 72 ATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 151 (595)
Q Consensus 72 ~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 151 (595)
+||+.+|+++.-++.|+|+.+..|++||++|...+++.|+++|+.+.++|.+|+|.+++..|+|+||++.||.+|||..+
T Consensus 72 atg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvT 151 (583)
T KOG2454|consen 72 ATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVT 151 (583)
T ss_pred CCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHH
Q 007627 152 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 231 (595)
Q Consensus 152 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~ 231 (595)
+++|.|.+.++++|++|++++..+.+.++.++++|+|+||+++|+||||||++.++|+++||++||++|+|.||++.|++
T Consensus 152 lEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~ 231 (583)
T KOG2454|consen 152 LEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSG 231 (583)
T ss_pred HHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeeh
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcC
Q 007627 232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (595)
Q Consensus 232 ~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~ 309 (595)
..+.++++.+|..+|.|+++||+++|-++++++|++ ++++|+|+||..+++.|++.|+++|+||++|||||||+||++
T Consensus 232 ~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~d 311 (583)
T KOG2454|consen 232 CFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICD 311 (583)
T ss_pred hhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEec
Confidence 999999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHH
Q 007627 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389 (595)
Q Consensus 310 daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~ 389 (595)
|+|++..+..+++|.|+.+||+|++.+|++||+++||.|+..|.++++.+|.|.+.....|||+|++.+++|.++++|+|
T Consensus 312 da~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~D 391 (583)
T KOG2454|consen 312 DADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVND 391 (583)
T ss_pred cccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCc
Q 007627 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469 (595)
Q Consensus 390 a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d 469 (595)
|+++||+++.||.++.||.++.|+||+||+|.|++++|+|+|||.||||++||++++.|++|+++|+++|||++|||+.|
T Consensus 392 Av~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~d 471 (583)
T KOG2454|consen 392 AVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGD 471 (583)
T ss_pred HHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCc
Q 007627 470 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVA 549 (595)
Q Consensus 470 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~ 549 (595)
+.++++++++|++|+|.|||+..+|.+| +||||+|.|||||++|.|||+..|+.|+|+.+++ +...|.+|++++||++
T Consensus 472 k~~c~y~a~~lqtG~vAiNDFasfY~cQ-lPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~~-~~~~t~ip~aldypi~ 549 (583)
T KOG2454|consen 472 KHRCKYIASQLQTGVVAINDFASFYMCQ-LPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDRV-AENATEIPEALDYPIY 549 (583)
T ss_pred HHHHHHHHhhhhccceeehhhhhhheec-cccCCccCCCccccccHHHHHHHhcccceeccch-hhhhccCCccccccCc
Confidence 9999999999999999999999999999 9999999999999999999999999999999997 5688899999999984
Q ss_pred --chHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q 007627 550 --ENGFEFQESLVEALYGLNIWDRLRALVNVLK 580 (595)
Q Consensus 550 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (595)
.++|.|+++++...|. .|.+....+.++-|
T Consensus 550 ~s~kaW~fvrsli~~~y~-aw~~~~snv~~l~k 581 (583)
T KOG2454|consen 550 GSLKAWDFVRSLIDVLYF-AWTDQSSNVSRLRK 581 (583)
T ss_pred ChhhHHHHHHHHHHHHHH-hHhhhccHHHHHhh
Confidence 5799999999999987 35444444555433
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-104 Score=877.65 Aligned_cols=498 Identities=21% Similarity=0.297 Sum_probs=449.6
Q ss_pred HHHHHHHHHhhCCCCCCceeecCCCCCCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHH
Q 007627 13 AYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERV 92 (595)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av 92 (595)
.|+|...||.+..|...+ ...|. ..++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~--~~~~~----------~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av 157 (604)
T PLN02419 90 FLALRSSWLSTSPEQSTQ--PQMPP----------RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAV 157 (604)
T ss_pred HHhhhhhhhccCCCcccC--ccccc----------ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHH
Confidence 467777776544432211 11222 255799999998766778999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCccccc
Q 007627 93 AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS 172 (595)
Q Consensus 93 ~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~ 172 (595)
++|++||+.|++++..+|.++|++++++|++|+++|++++++|+||+..++. +|+..+++.++|+++.++++.+.. .+
T Consensus 158 ~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i~~~~~~a~~a~~~~g~~-~~ 235 (604)
T PLN02419 158 SAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSH-GDIFRGLEVVEHACGMATLQMGEY-LP 235 (604)
T ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCc-cc
Confidence 9999999999999999999999999999999999999999999999999985 699999999999999887765422 11
Q ss_pred CCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcE
Q 007627 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 252 (595)
Q Consensus 173 ~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v 252 (595)
.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++. ++|+|+|+|
T Consensus 236 ~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~----eAGlP~Gvv 309 (604)
T PLN02419 236 NV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAM----EAGLPDGVL 309 (604)
T ss_pred cc--CCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH----HhCcCcceE
Confidence 11 123456889999999999999999999999999999999999999999999999988777654 689999999
Q ss_pred EeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCC
Q 007627 253 DVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ 330 (595)
Q Consensus 253 ~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ 330 (595)
|+|+|+++.+++|+. +||+|+||||+.+|+.|+++|+++++|+++|||||||+||++|||++.|++.+++|+|.|+||
T Consensus 310 nvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ 389 (604)
T PLN02419 310 NIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQ 389 (604)
T ss_pred EEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCC
Confidence 999998788898986 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCC
Q 007627 331 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 410 (595)
Q Consensus 331 ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~ 410 (595)
.|++++|||||++ +|+|+++|.++++++++|+|.++++++||||+++++++++++|++|+++||++++||.+...+...
T Consensus 390 ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~ 468 (604)
T PLN02419 390 RCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYE 468 (604)
T ss_pred CcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCC
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999743222224
Q ss_pred CCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCC
Q 007627 411 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490 (595)
Q Consensus 411 ~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~ 490 (595)
.|+|++||||.++++||.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.
T Consensus 469 ~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~ 548 (604)
T PLN02419 469 KGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVP 548 (604)
T ss_pred CCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CcccccCCCCCCCcCCCCCC--CCCcHHHHhccceeeEEEEccc
Q 007627 491 ASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVEDRW 532 (595)
Q Consensus 491 ~~~~~~~~~PfGG~~~SG~G--~~~G~~gl~~~t~~k~v~~~~~ 532 (595)
. +...+.+||||+|.||+| +++|++|+++||+.|+|+....
T Consensus 549 ~-~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~ 591 (604)
T PLN02419 549 I-PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQK 591 (604)
T ss_pred C-CCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEccC
Confidence 3 333345899999999999 7999999999999999987663
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-105 Score=795.41 Aligned_cols=471 Identities=31% Similarity=0.498 Sum_probs=443.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.+-||+|+|+.+.++.++++.||++|+.|+.|+..+.+|.++||++|.+||.+|+.++..+|.++|+++.++|.+|.++|
T Consensus 24 ~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddL 103 (503)
T KOG2451|consen 24 AQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDL 103 (503)
T ss_pred hhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHH
Confidence 46799999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|.|||+.|+ .+||......++|+++.+++.......+. .......+.++|.||+++|+|||||......+
T Consensus 104 a~iiTlE~GKpL~eA-~gEv~y~a~f~eWyAeEA~RvyGdii~s~---~~~rr~i~ikQPvGV~alItPWNFP~AMItRK 179 (503)
T KOG2451|consen 104 ATIITLENGKPLGEA-KGEVAYSAAFFEWYAEEARRVYGDIIPSL---NPNRRLIVIKQPVGVVALITPWNFPAAMITRK 179 (503)
T ss_pred HHHHhhhcCCchhhc-cceeehhHHHHHHHHHHhhhhhccccCCC---CCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence 999999999999999 58999999999999999988765433221 23456778999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC----hhHHHHHHh--CCCEEEEeCChhHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF----AETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~----~~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
..+||++||+||+|||+.||+++..++++.. +||+|+|++|+|+++ .+.+.+|+. .|++|+||||+.+||
T Consensus 180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~----~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGK 255 (503)
T KOG2451|consen 180 AGAALAAGCTVVVKPSEDTPLSALALAKLAE----EAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGK 255 (503)
T ss_pred HHHHHhcCceEEEccCCCCchHHHHHHHHHH----HcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHH
Confidence 9999999999999999999999999988765 689999999999974 377899988 999999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.++++++.++|++.+||||+.|+||++|||||.|++..+..+|.|+||+|++.+|+|||++|||+|++.|.++++++++|
T Consensus 256 iL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vG 335 (503)
T KOG2451|consen 256 ILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVG 335 (503)
T ss_pred HHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+.+++++..||+||+.+.++++++++||+++||++++||++.. ....+|++||||.+|+++|-+..||+|||+.+|+
T Consensus 336 dG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~---~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~ 412 (503)
T KOG2451|consen 336 DGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERS---ELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVF 412 (503)
T ss_pred CCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEcc---ccCCccccceEeecCCccceeeccccccccceee
Confidence 9999999999999999999999999999999999999999432 2355899999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|.||+|+++|+++.||++|+||+|.++..+++++|++|+|.+|.-.... ...||||+|+||+||+++++|+++|+
T Consensus 413 kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~--~~~pFGGVKeSG~GREgskyGidey~ 490 (503)
T KOG2451|consen 413 KFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISD--AEAPFGGVKESGFGREGSKYGIDEYL 490 (503)
T ss_pred eeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecc--cccCcCCccccccCccccccchhhhh
Confidence 9999999999999999999999999999999999999999999999865543 35899999999999999999999999
Q ss_pred eeeEEEEccc
Q 007627 523 LVKSVVEDRW 532 (595)
Q Consensus 523 ~~k~v~~~~~ 532 (595)
..|.+++..+
T Consensus 491 ~ik~icig~L 500 (503)
T KOG2451|consen 491 VIKYICIGTL 500 (503)
T ss_pred hhheeeecCc
Confidence 9999987654
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-103 Score=861.81 Aligned_cols=469 Identities=28% Similarity=0.488 Sum_probs=434.6
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
...++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|++++++|+++++
T Consensus 9 ~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 88 (482)
T PRK11241 9 FRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQD 88 (482)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 33468999999887677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++. .|+..+++.++|++..+++..... .+.. ..+...+++|+|+|||++|+|||||+.+++
T Consensus 89 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 164 (482)
T PRK11241 89 DLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT-IPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMIT 164 (482)
T ss_pred HHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccC--CCCceEEEEEeeceEEEEECCCcChHHHHH
Confidence 999999999999999984 799999999999998876543221 1111 112346789999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+||||.+|+++.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|.|+||||+++|+.
T Consensus 165 ~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~ 240 (482)
T PRK11241 165 RKAGPALAAGCTMVLKPASQTPFSALALAELAI----RAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQ 240 (482)
T ss_pred HHHHHHHHhCCEEEEECCCCChHHHHHHHHHHH----HcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHH
Confidence 999999999999999999999999988777654 6899999999999965 67899997 7999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 241 i~~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~ 320 (482)
T PRK11241 241 LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD 320 (482)
T ss_pred HHHHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
|.++++++||||++.++++++++|++|+++||++++||... ..+|+|++|||+.+++++|++++||+||||++|++
T Consensus 321 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~----~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~ 396 (482)
T PRK11241 321 GLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFR 396 (482)
T ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCC----CCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEE
Confidence 99999999999999999999999999999999999999731 13689999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|.||+|+++|.+|+++||+
T Consensus 397 ~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~ft~ 474 (482)
T PRK11241 397 FKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLE 474 (482)
T ss_pred eCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCC--CCCCCcCCccccccCcccHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999987543 2348999999999999999999999999
Q ss_pred eeEEEE
Q 007627 524 VKSVVE 529 (595)
Q Consensus 524 ~k~v~~ 529 (595)
.|++..
T Consensus 475 ~k~v~~ 480 (482)
T PRK11241 475 IKYMCI 480 (482)
T ss_pred ceEEEE
Confidence 999864
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-105 Score=829.88 Aligned_cols=468 Identities=31% Similarity=0.490 Sum_probs=441.5
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
.++||||+|..+.++++++++||+||+++++|+.++.+||+++|++||+||+ .|++++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 5899999999999999999999999999999999999999999999999999 69999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|+...+.|.|||..+++..++..+++.+||++..+++... +..++. .....+.+++|+|||+.|+|||||+....
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~-~~~~~~---~~~~~yt~~eP~GV~G~I~pWN~Pllm~a 176 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHG-STIPTD---GEFFAYTRREPIGVCGQIIPWNFPLLMQA 176 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhccc-ccCCCC---CceEEEecCCcceeeeEeccCchHHHHHH
Confidence 99999999999999999878999999999999998877521 111211 23467899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
|+++|||++||+||+||+|++|+|+.+++++++ ++|+|+|++|+|+|.+ +.+.+|.+ +||+|.||||+.+|+.
T Consensus 177 wKlaPALa~GNtvV~Kpae~tplsal~~~~l~~----eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~ 252 (501)
T KOG2450|consen 177 WKLAPALAAGNTVVLKPAEQTPLTALYLASLCK----EAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKE 252 (501)
T ss_pred HhhhhHHhhCcEEEecCCCCCCchHHHHHHHhH----HhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhH
Confidence 999999999999999999999999999888765 6899999999999976 88999998 9999999999999999
Q ss_pred HHHHhhc-CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh-ccC
Q 007627 284 IMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA 361 (595)
Q Consensus 284 v~~~aa~-~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~-l~~ 361 (595)
|++++++ ++|||+||||||||.||++|||++.|++.++.+.|+|+||.|.+.+|++||+++||+|++.++++.++ +++
T Consensus 253 I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kv 332 (501)
T KOG2450|consen 253 IMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKV 332 (501)
T ss_pred HhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhccccc
Confidence 9999884 59999999999999999999999999999999999999999999999999999999999999999966 999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|||.++++..||.+++.|++|+.++|+.++++||++++||.+ + ...|+|++|||+.+++++|.|++||+||||++|
T Consensus 333 GdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~--~--g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v 408 (501)
T KOG2450|consen 333 GDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVR--L--GDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVV 408 (501)
T ss_pred CCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcc--c--CCCceEECCeeccCCChhhhhhHhhccCceEEE
Confidence 999999999999999999999999999999999999999986 2 368999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|++.||+|+++|+++|||++.|||+|.+++.++++++++|+||||++.... +.+||||+|+||+||+.|.+++++|
T Consensus 409 ~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~--~~~PfgG~K~SG~GRE~g~~~l~~y 486 (501)
T KOG2450|consen 409 LKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFD--AQVPFGGFKMSGIGRELGEYGLEAY 486 (501)
T ss_pred EecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEecccccc--ccCCccccccccCCccccHHHHhhc
Confidence 99999999999999999999999999999999999999999999999986653 3589999999999999999999999
Q ss_pred ceeeEEEEc
Q 007627 522 CLVKSVVED 530 (595)
Q Consensus 522 t~~k~v~~~ 530 (595)
|+.|+|+.+
T Consensus 487 tevKtv~v~ 495 (501)
T KOG2450|consen 487 TEVKTVTVK 495 (501)
T ss_pred ceeeEEEEe
Confidence 999999864
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-103 Score=854.37 Aligned_cols=464 Identities=34% Similarity=0.566 Sum_probs=435.8
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
++||+|+|+...+ +++++||+||+++++++.++.+|+++|+++|+.||+.|++++..+|.++|++++++|++|+++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6899999998765 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||++.++. +|+..+++.++|+++.++++.... .+.+. ....+++++|+|||++|+|||||+.+.++++
T Consensus 80 ~~~~~e~Gk~i~ea~-~ei~~~~~~~~~~a~~~~~~~~~~-~~~~~---~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ 154 (472)
T COG1012 80 ALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGET-IPTDK---GSKALVRREPLGVVGAITPWNFPLALAAWKL 154 (472)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCc-cCCCC---CcceEEEeecceEEEEECCCCCHHHHHHhhH
Confidence 999999999999985 579999999999999998766544 33321 5678999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+|.+ +.+++|+. +||+|+||||+++|+.|++
T Consensus 155 apALaaGntVV~KPse~tp~sa~~l~~~~~----~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~ 230 (472)
T COG1012 155 APALAAGNTVVLKPSEQTPLSALALAELAA----EAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAA 230 (472)
T ss_pred HHHHHcCCEEEEECcccCcHHHHHHHHHHH----HhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHH
Confidence 999999999999999999999988888765 5789999999999965 68999998 8999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh-ccCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPL 365 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~-l~~G~~~ 365 (595)
.|++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|.++ ++ +++||+.
T Consensus 231 ~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~ 309 (472)
T COG1012 231 AAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPL 309 (472)
T ss_pred HHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 65 8999988
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++.+++||||+++++++++++|++++++|++++.||++ .. |+|++|||+.+++++|++++||+||||++|++|+
T Consensus 310 d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-----~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~ 383 (472)
T COG1012 310 DPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-----PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFK 383 (472)
T ss_pred CCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-----CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeC
Confidence 89999999999999999999999999999999999872 12 9999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||+++|||+|..++.++++++++|+|+||+...+.....+||||+|.||+|+++|.+++++|++.|
T Consensus 384 ~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k 463 (472)
T COG1012 384 DEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVK 463 (472)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcce
Confidence 99999999999999999999999999999999999999999999855445556899999999999999999999999999
Q ss_pred EEEEcc
Q 007627 526 SVVEDR 531 (595)
Q Consensus 526 ~v~~~~ 531 (595)
++..+.
T Consensus 464 ~v~~~~ 469 (472)
T COG1012 464 TVTIKL 469 (472)
T ss_pred EEEEec
Confidence 998654
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-102 Score=847.50 Aligned_cols=461 Identities=26% Similarity=0.430 Sum_probs=424.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhc
Q 007627 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 162 (595)
Q Consensus 83 ~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 162 (595)
....|+++++++|++||++|+++|..+|.++|++++++|++|+++|++++++|+|||..|+...|+..+++.++|+++++
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999987779999999999999999
Q ss_pred hhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 007627 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (595)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l 242 (595)
++|.++..........+...++.|+|+|||++|+|||||+.++++++++||++||+||+||||.+|+++.++.+++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-- 164 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-- 164 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH--
Confidence 998876544332222344578999999999999999999999999999999999999999999999999998888753
Q ss_pred HhcCCCCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHH
Q 007627 243 AAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 321 (595)
Q Consensus 243 ~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~ 321 (595)
++|+|++|+|+|+++.+..|++ ++|+|+||||+.+|+.|++.|++++||+++|||||||+||++|||++.|++.++
T Consensus 165 ---~lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~ 241 (484)
T PLN02174 165 ---YLDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRII 241 (484)
T ss_pred ---hCCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHH
Confidence 5999999999997777888888 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-HcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeec
Q 007627 322 RAAL-QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (595)
Q Consensus 322 ~~~f-~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~g 400 (595)
+|+| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||||++.++++++++|+++ ++|+++++|
T Consensus 242 ~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~G 319 (484)
T PLN02174 242 AGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYG 319 (484)
T ss_pred HHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEEC
Confidence 9999 59999999999999999999999999999999999999976 78999999999999999999998 789999999
Q ss_pred CCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh
Q 007627 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (595)
Q Consensus 401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l 480 (595)
|.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 320 G~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l 394 (484)
T PLN02174 320 GEK-----DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATV 394 (484)
T ss_pred CCc-----CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcC
Confidence 973 236899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCcc-hHHHHHHHH
Q 007627 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAE-NGFEFQESL 559 (595)
Q Consensus 481 ~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~~-~~~~~~~~~ 559 (595)
++|+|+||++..+...+.+||||+|+||+|++||.+||++||+.|+|..++. .+..+++|||+. .+.++++.+
T Consensus 395 ~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~------~~~~~~~~pp~~~~~~~~~~~~ 468 (484)
T PLN02174 395 SAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSL------FGDSAVRYPPYSRGKLRLLKAL 468 (484)
T ss_pred CcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCc------cCcccccCCCCChHHHHHHHHH
Confidence 9999999998665444568999999999999999999999999999988763 235578998865 466777777
Q ss_pred HH
Q 007627 560 VE 561 (595)
Q Consensus 560 ~~ 561 (595)
++
T Consensus 469 ~~ 470 (484)
T PLN02174 469 VD 470 (484)
T ss_pred Hh
Confidence 65
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-101 Score=846.22 Aligned_cols=470 Identities=30% Similarity=0.494 Sum_probs=436.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
+++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++|++
T Consensus 21 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 100 (501)
T PLN02766 21 TKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIE 100 (501)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 5679999999877778999999999999999999999999999999999997 59999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++...|+..+++.++|+++.++++.. +..+.. .....++.++|+|||++|+|||||+.+++
T Consensus 101 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 176 (501)
T PLN02766 101 ELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHG-ETLKMS---RQLQGYTLKEPIGVVGHIIPWNFPSTMFF 176 (501)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccC---CCceEEEEeccceEEEEECCCCChHHHHH
Confidence 99999999999999988667999999999999988776543 211111 12346788999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+||||.+|.++.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.
T Consensus 177 ~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~ 252 (501)
T PLN02766 177 MKVAPALAAGCTMVVKPAEQTPLSALFYAHLAK----LAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRK 252 (501)
T ss_pred HHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHH----hcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 999999999999999999999999988877654 6899999999999965 67888987 8999999999999999
Q ss_pred HHHHhh-cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 284 IMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 284 v~~~aa-~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
|++.|+ ++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 253 i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G 332 (501)
T PLN02766 253 IMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVG 332 (501)
T ss_pred HHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 999999 6999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++|||++++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 333 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 408 (501)
T PLN02766 333 DPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPC----GDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLM 408 (501)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhCCccCceEEEE
Confidence 999999999999999999999999999999999999999742 2368999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++||
T Consensus 409 ~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft 486 (501)
T PLN02766 409 KFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAF--DPDCPFGGYKMSGFGRDQGMDALDKYL 486 (501)
T ss_pred EeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccCcCCccchHHHHHHHh
Confidence 999999999999999999999999999999999999999999999986542 345899999999999999999999999
Q ss_pred eeeEEEEccc
Q 007627 523 LVKSVVEDRW 532 (595)
Q Consensus 523 ~~k~v~~~~~ 532 (595)
+.|+++....
T Consensus 487 ~~k~v~~~~~ 496 (501)
T PLN02766 487 QVKSVVTPLY 496 (501)
T ss_pred ceEEEEEecc
Confidence 9999987543
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-101 Score=839.19 Aligned_cols=466 Identities=27% Similarity=0.435 Sum_probs=431.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 367999999875 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+|||..++...|+..+++.++|+++..+.... ...+. ...+...++.++|+|||++|+|||||+.+++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 157 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG-LAAGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 157 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cccCc--cCCCceEEEEEecceEEEEECCCCchHHHHHHH
Confidence 999999999999988667999999999999877654322 11111 012345689999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++..+++++.+ ++|+|++|+|+|++ +.++.|++ ++|+|+||||+++|+.|+
T Consensus 158 ~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~-----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 232 (472)
T TIGR03374 158 LAPALAAGNCVVLKPSEITPLTALKLAELAKD-----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIL 232 (472)
T ss_pred HHHHHhcCCEEEecCCCCCCHHHHHHHHHHHH-----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999998888753 49999999999954 77899996 999999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 233 ~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~ 312 (472)
T TIGR03374 233 SHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPD 312 (472)
T ss_pred HHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcC-CeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~G-a~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
++++++|||++.+++++++++|++++++| +++++||... ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~ 388 (472)
T TIGR03374 313 DESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKR----KGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSF 388 (472)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccC----CCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEE
Confidence 99999999999999999999999999999 7999999742 235899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+.+||||+|.||+|++||++||++||+.
T Consensus 389 ~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~ 466 (472)
T TIGR03374 389 DDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVV 466 (472)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCccCccCccchHHHHHHhhce
Confidence 9999999999999999999999999999999999999999999987543 34589999999999999999999999999
Q ss_pred eEEEE
Q 007627 525 KSVVE 529 (595)
Q Consensus 525 k~v~~ 529 (595)
|+++.
T Consensus 467 k~i~~ 471 (472)
T TIGR03374 467 RHIMV 471 (472)
T ss_pred EEEEE
Confidence 99864
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-100 Score=840.86 Aligned_cols=471 Identities=23% Similarity=0.365 Sum_probs=435.9
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
...+||+|+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|++++++|++|+++
T Consensus 20 ~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
T PLN02315 20 NLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDY 97 (508)
T ss_pred ccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHH
Confidence 3568999999864 57899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++ .+|+..+++.++|+++.+++... +..+.. ......++.++|+|||++|+|||||+.++++
T Consensus 98 la~~~~~e~GK~~~~a-~~ev~~~i~~~~~~~~~~~~l~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 173 (508)
T PLN02315 98 LGRLVSLEMGKILAEG-IGEVQEIIDMCDFAVGLSRQLNG-SIIPSE--RPNHMMMEVWNPLGIVGVITAFNFPCAVLGW 173 (508)
T ss_pred HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-ccccCC--CCCceeEEEEecceEEEEECCCcchHHHHHH
Confidence 9999999999999998 57999999999999987765432 111111 0123346789999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
++++||++||+||+|||+.+|+++..+.+++.++|.++|+|+|++|+|+|+.+.++.|+. ++|+|+||||+.+|+.|+
T Consensus 174 ~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~ 253 (508)
T PLN02315 174 NACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQ 253 (508)
T ss_pred HHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999996678888987 999999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 254 ~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~ 333 (508)
T PLN02315 254 QTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPL 333 (508)
T ss_pred HHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++|||++..+++++++++++++++|+++++||.+. +..|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 334 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~----~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~ 408 (508)
T PLN02315 334 EKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAI----ESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFK 408 (508)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeC
Confidence 999999999999999999999999999999999999742 246899999999 699999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHH--HhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA--QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~--~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+||||+++|+++|||++||||+|.+.++++++ ++++|+|+||+..... .+.+||||+|.||+|+++|.+|+++||+
T Consensus 409 ~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 487 (508)
T PLN02315 409 TLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGA-EIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCC-CCCCCCCccccccCCccchHHHHHHHhh
Confidence 999999999999999999999999999999985 7999999999854332 3458999999999999999999999999
Q ss_pred eeEEEEc
Q 007627 524 VKSVVED 530 (595)
Q Consensus 524 ~k~v~~~ 530 (595)
.|+|+.+
T Consensus 488 ~k~v~~~ 494 (508)
T PLN02315 488 RSTCTIN 494 (508)
T ss_pred EEEEEEe
Confidence 9998765
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-100 Score=837.96 Aligned_cols=470 Identities=27% Similarity=0.447 Sum_probs=432.7
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++|++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999877778899999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccc-cccceEEEecceEEEEEcCcchhhHhh
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-HKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
+|++++++|+||+..++..+|+..+++.++|++...++.... ..+...... ....++.++|+|||++|+|||||+.++
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~ 164 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGK-TIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMML 164 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cccccccCCCCceEEEEeeccceEEEEcCCchHHHHH
Confidence 999999999999999986679999999999999877664322 111110001 123578999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|+|+|++ +.++.|+. +||+|+||||+.+|+
T Consensus 165 ~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~----~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~ 240 (486)
T cd07140 165 AWKMAACLAAGNTVVLKPAQVTPLTALKFAELT----VKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGK 240 (486)
T ss_pred HHHHHHHHHhCCEEEEECCccCcHHHHHHHHHH----HHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 999999999999999999999999998877765 46899999999999965 67888887 899999999999999
Q ss_pred HHHHHhhc-CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~~aa~-~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++.|++ +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 241 ~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~ 320 (486)
T cd07140 241 HIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKI 320 (486)
T ss_pred HHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCc
Confidence 99999996 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++|||++++++++++++|++|+++||++++||... +..|+|++|||+.+++++|++++||+||||++|
T Consensus 321 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v 396 (486)
T cd07140 321 GDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQV----DRPGFFFEPTVFTDVEDHMFIAKEESFGPIMII 396 (486)
T ss_pred cCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCeeECCEEEeCCCCCChhhhCCCCCCeEEE
Confidence 9999999999999999999999999999999999999999742 236899999999999999999999999999999
Q ss_pred EeeC--CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 442 MKFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 442 ~~~~--~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
++|+ |++|||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|+||+|+++|++||+
T Consensus 397 ~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~ 474 (486)
T cd07140 397 SKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKT--DVAAPFGGFKQSGFGKDLGEEALN 474 (486)
T ss_pred EEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccCcCCCcchHHHHH
Confidence 9998 699999999999999999999999999999999999999999996543 335899999999999999999999
Q ss_pred ccceeeEEEE
Q 007627 520 ACCLVKSVVE 529 (595)
Q Consensus 520 ~~t~~k~v~~ 529 (595)
+||+.|+|+.
T Consensus 475 ~ft~~k~v~~ 484 (486)
T cd07140 475 EYLKTKTVTI 484 (486)
T ss_pred HhhcEEEEEE
Confidence 9999999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-100 Score=839.27 Aligned_cols=477 Identities=29% Similarity=0.468 Sum_probs=440.0
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 007627 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (595)
Q Consensus 45 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~ 124 (595)
++...++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|++++++|++|
T Consensus 3 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 82 (488)
T PRK13252 3 RQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRER 82 (488)
T ss_pred cCccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 34556789999999877778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHh
Q 007627 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (595)
Q Consensus 125 ~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~ 204 (595)
+++|++++++|+||+..++...|+..+++.++++++..+.... +..+.. .+...+++++|+|||++|+|||||+.+
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g-~~~~~~---~~~~~~~~~~PlGVv~~I~p~N~P~~~ 158 (488)
T PRK13252 83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEG-EQIPLR---GGSFVYTRREPLGVCAGIGAWNYPIQI 158 (488)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccC---CCceEEEEEeeeeEEEEECCCchHHHH
Confidence 9999999999999999998767999999999999987765322 111111 133567899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHH
Q 007627 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 205 ~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
+++++++||++||+||+|||+.+|+++..+.++++ ++|+|+|++|+|+|+++.++.|+. ++|+|+||||+.+|+
T Consensus 159 ~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~----~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~ 234 (488)
T PRK13252 159 ACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYT----EAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGK 234 (488)
T ss_pred HHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHH----HcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 99999999999999999999999999998887765 689999999999997778888987 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|+++++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 235 ~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (488)
T PRK13252 235 KVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIG 314 (488)
T ss_pred HHHHHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++|||+++.++++++++|++|+++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|+
T Consensus 315 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~ 394 (488)
T PRK13252 315 DPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVL 394 (488)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEE
Confidence 99999999999999999999999999999999999999974322212468999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|.||+|++||++|+++||
T Consensus 395 ~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~ft 472 (488)
T PRK13252 395 TFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGES--PAEMPVGGYKQSGIGRENGIATLEHYT 472 (488)
T ss_pred eeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCC--CCCCCCCCCccCcCCcCChHHHHHHhc
Confidence 999999999999999999999999999999999999999999999986432 345899999999999999999999999
Q ss_pred eeeEEEEcc
Q 007627 523 LVKSVVEDR 531 (595)
Q Consensus 523 ~~k~v~~~~ 531 (595)
+.|+|+...
T Consensus 473 ~~k~i~~~~ 481 (488)
T PRK13252 473 QIKSVQVEM 481 (488)
T ss_pred ceEEEEEeC
Confidence 999998753
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-100 Score=833.12 Aligned_cols=469 Identities=32% Similarity=0.475 Sum_probs=434.1
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||++|+++|.++|.++|++++++|++|+++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 57899999987677899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||+..++...|+..+++.++++++.+.+... +..+. ..+...+++++|+|||++|+|||||+.++++++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i 157 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG-SANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKL 157 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHH
Confidence 99999999999999767999999999999887654322 11111 123356889999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
++||++||+||+|||+.+|+++..+.+++.+ ++|+|++|+|+|++ +.++.|++ ++|.|+||||+.+|+.|++
T Consensus 158 ~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~-----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 232 (475)
T cd07117 158 APALAAGNTVVIKPSSTTSLSLLELAKIIQD-----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAI 232 (475)
T ss_pred HHHHHcCCEEEEECCccCcHHHHHHHHHHHH-----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999988764 39999999999964 67888988 7999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (595)
+++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 233 ~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~ 312 (475)
T cd07117 233 AAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLD 312 (475)
T ss_pred HHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCC
Q 007627 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (595)
Q Consensus 367 ~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~ 446 (595)
+++++||++++.++++++++|++|+++|+++++||.....+..+.|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 313 ~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 392 (475)
T cd07117 313 PDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKT 392 (475)
T ss_pred CCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECC
Confidence 99999999999999999999999999999999999753222124689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeE
Q 007627 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 526 (595)
Q Consensus 447 ~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~ 526 (595)
.||||+++|+++|||++||||+|.+++.++++++++|+|+||++... ...+||||+|+||+|++||++|+++||+.|+
T Consensus 393 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~ 470 (475)
T cd07117 393 EDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQI--PAGAPFGGYKKSGIGRETHKSMLDAYTQMKN 470 (475)
T ss_pred HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCccCcCCCCchHHHHHHHhCeEE
Confidence 99999999999999999999999999999999999999999986443 3458999999999999999999999999999
Q ss_pred EEE
Q 007627 527 VVE 529 (595)
Q Consensus 527 v~~ 529 (595)
++.
T Consensus 471 v~~ 473 (475)
T cd07117 471 IYI 473 (475)
T ss_pred EEE
Confidence 865
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-100 Score=834.55 Aligned_cols=469 Identities=29% Similarity=0.431 Sum_probs=431.9
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~-W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. |+++|.++|.++|+++++.|.+++++|
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 4689999988766778999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCc-c--cccccceEEEecceEEEEEcCcchhhHhh
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR-S--MIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++++++|+||+..++...|+..+++.++++++..++.... ..+... . ..+...+++++|+|||++|+|||||+.++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 159 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE-TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIA 159 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-ccccccccccCCCceEEEEEeecceEEEEcCCChHHHHH
Confidence 9999999999999986569999999999998776654321 111100 0 01235678999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
++++++||++||+||+|||+.+|+++..+.+++ .++|+|+|+||+|+|+++.++.|++ ++|+|+||||+.+|+.
T Consensus 160 ~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~----~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~ 235 (477)
T cd07113 160 VWKIGAALATGCTIVIKPSEFTPLTLLRVAELA----KEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKK 235 (477)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHH----HHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 999999999999999999999999998877765 4689999999999997678888997 7999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 236 i~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (477)
T cd07113 236 IGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGS 315 (477)
T ss_pred HHHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
|.++++++|||+++.++++++++|++|+++|+++++||.+. ...|+|++|||+.+++++|++++||+||||++|++
T Consensus 316 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~ 391 (477)
T cd07113 316 PMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEAL----AGEGYFVQPTLVLARSADSRLMREETFGPVVSFVP 391 (477)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEE
Confidence 99999999999999999999999999999999999999742 23589999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++||+
T Consensus 392 ~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~ 469 (477)
T cd07113 392 YEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFL--DPAVPFGGMKQSGIGREFGSAFIDDYTE 469 (477)
T ss_pred eCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCccccCCccchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999976432 3458999999999999999999999999
Q ss_pred eeEEEE
Q 007627 524 VKSVVE 529 (595)
Q Consensus 524 ~k~v~~ 529 (595)
.|+|+.
T Consensus 470 ~k~v~~ 475 (477)
T cd07113 470 LKSVMI 475 (477)
T ss_pred eEEEEE
Confidence 999875
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-100 Score=833.04 Aligned_cols=469 Identities=30% Similarity=0.457 Sum_probs=435.0
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 57999999987777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||+..++...|+..+++.++++++..+...... .+. ..+...++.++|+|||++|+|||||+.++++++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i 157 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSL-SEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKL 157 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence 9999999999999876799999999999988876532211 111 123456789999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
++||++||+||+|||+.+|+++..+++++++ + +|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|++
T Consensus 158 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~ 232 (480)
T cd07559 158 APALAAGNTVVLKPASQTPLSILVLMELIGD----L-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQ 232 (480)
T ss_pred HHHHHcCCEEEEECchhhhHHHHHHHHHHHH----h-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999988764 2 9999999999965 67899987 8999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCC-----CHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~da-----Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|+++++|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 233 ~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 312 (480)
T cd07559 233 YAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKV 312 (480)
T ss_pred HHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++|||++++++++++++|++|+++||++++||.+...+....|+|++|||+.++++||++++||+||||++|
T Consensus 313 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 392 (480)
T cd07559 313 GNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAV 392 (480)
T ss_pred CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEE
Confidence 99999999999999999999999999999999999999998533222246899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+.+||||+|.||+|+++|++|+++|
T Consensus 393 ~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~ 470 (480)
T cd07559 393 ITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQY--PAHAPFGGYKKSGIGRETHKMMLDHY 470 (480)
T ss_pred EeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCCccCcCCccChHHHHHHh
Confidence 9999999999999999999999999999999999999999999999976443 34589999999999999999999999
Q ss_pred ceeeEEEE
Q 007627 522 CLVKSVVE 529 (595)
Q Consensus 522 t~~k~v~~ 529 (595)
|+.|+++.
T Consensus 471 ~~~k~v~~ 478 (480)
T cd07559 471 QQTKNILV 478 (480)
T ss_pred hceEEEEE
Confidence 99999865
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=834.73 Aligned_cols=469 Identities=30% Similarity=0.496 Sum_probs=435.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|++++++|++|+++|
T Consensus 25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 104 (498)
T PLN02278 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDL 104 (498)
T ss_pred ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 56899999988766788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++. .|+..+++.++|+++.++++... ..+.. ..+...+++|+|+|||++|+|||||+.+++++
T Consensus 105 a~~~~~e~Gk~~~~a~-~Ev~~~i~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~ 180 (498)
T PLN02278 105 AQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGD-IIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRK 180 (498)
T ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceEEEEeecccEEEEECCCccHHHHHHHH
Confidence 9999999999999985 69999999999999988776432 11111 12335678899999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|+
T Consensus 181 i~~ALaaGN~VVlKps~~tp~~~~~l~~~l----~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 256 (498)
T PLN02278 181 VGPALAAGCTVVVKPSELTPLTALAAAELA----LQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM 256 (498)
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 999999999999999999999998777664 56899999999999976 66888987 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.|+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 257 ~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~ 336 (498)
T PLN02278 257 AGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGF 336 (498)
T ss_pred HHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++||++++.++++++++|++|+++|+++++||... ..+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 337 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~ 412 (498)
T PLN02278 337 EEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRH----SLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFK 412 (498)
T ss_pred CCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeC
Confidence 999999999999999999999999999999999999732 1358999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... . ..+||||+|.||+|+++|++||++||+.|
T Consensus 413 ~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~-~~~PfGG~k~SG~G~~~G~~~l~~ft~~k 490 (498)
T PLN02278 413 TEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLIS-T-EVAPFGGVKQSGLGREGSKYGIDEYLEIK 490 (498)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC-C-CCCCcCCcccCcCCccchHHHHHHhheeE
Confidence 999999999999999999999999999999999999999999986543 2 35899999999999999999999999999
Q ss_pred EEEEcc
Q 007627 526 SVVEDR 531 (595)
Q Consensus 526 ~v~~~~ 531 (595)
+|....
T Consensus 491 ~i~~~~ 496 (498)
T PLN02278 491 YVCLGN 496 (498)
T ss_pred EEEEec
Confidence 997643
|
|
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=833.22 Aligned_cols=472 Identities=27% Similarity=0.392 Sum_probs=439.9
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 007627 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (595)
Q Consensus 51 ~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~ 130 (595)
+||+|+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|.+++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999998875 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHH
Q 007627 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (595)
Q Consensus 131 ~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~ 210 (595)
++++|+||+..++. +|+..+++.++|++...++.... ..+.. ..+...+++++|+|||++|+|||||+.+++++++
T Consensus 80 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~ 155 (478)
T cd07086 80 LVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGL-TIPSE--RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAA 155 (478)
T ss_pred HHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceEEEEEecceeEEEECCCCcHHHHHHHHHH
Confidence 99999999999985 69999999999999887764322 11111 1223567899999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHh
Q 007627 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (595)
Q Consensus 211 ~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~a 288 (595)
+||++||+||+|||+.+|.++..+.++++++|.++|+|+|++|+|+|+++.++.|+. ++|+|+||||+.+|+.|++.+
T Consensus 156 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 156 IALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999997778888887 699999999999999999999
Q ss_pred hcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCC
Q 007627 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368 (595)
Q Consensus 289 a~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~ 368 (595)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 236 a~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 315 (478)
T cd07086 236 ARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEG 315 (478)
T ss_pred hccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHH
Q 007627 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE 448 (595)
Q Consensus 369 ~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~ 448 (595)
+++|||+++.++++++++|++|+++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 316 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~d 393 (478)
T cd07086 316 TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDG--GEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLE 393 (478)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHH
Confidence 99999999999999999999999999999999974321 1258999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceeEEecCcHHHHHHHHHH--hccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeE
Q 007627 449 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQ--IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 526 (595)
Q Consensus 449 eAi~~aN~~~~gL~asVft~d~~~~~~~~~~--l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~ 526 (595)
|||+++|+++|||++||||+|.+++++++++ +++|+|+||+.... ..+.+||||+|.||+|+++|++|+++||+.|+
T Consensus 394 eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~ 472 (478)
T cd07086 394 EAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRST 472 (478)
T ss_pred HHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceEE
Confidence 9999999999999999999999999999999 99999999997554 33458999999999999999999999999999
Q ss_pred EEEc
Q 007627 527 VVED 530 (595)
Q Consensus 527 v~~~ 530 (595)
|+.+
T Consensus 473 i~~~ 476 (478)
T cd07086 473 CTIN 476 (478)
T ss_pred EEEe
Confidence 9764
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-99 Score=837.44 Aligned_cols=472 Identities=29% Similarity=0.480 Sum_probs=435.4
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHH
Q 007627 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIE 123 (595)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~--W~~~~~~~R~~~L~~l~~~l~~ 123 (595)
....++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+. |++++..+|.++|++++++|++
T Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 134 (538)
T PLN02466 55 VSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEK 134 (538)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHH
Confidence 34456899999998777889999999999999999999999999999999999974 9999999999999999999999
Q ss_pred hHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhH
Q 007627 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203 (595)
Q Consensus 124 ~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~ 203 (595)
|+++|++++++|+||+..++...|+..+++.++|++...++.... ..+.. .....++.++|+|||++|+|||||+.
T Consensus 135 ~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~ 210 (538)
T PLN02466 135 HNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGL-TVPAD---GPHHVQTLHEPIGVAGQIIPWNFPLL 210 (538)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceEEEEEecceEEEEECCCchHHH
Confidence 999999999999999999987679999999999998876654321 11111 12346799999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhH
Q 007627 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (595)
Q Consensus 204 ~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~ 280 (595)
++++++++||++||+||+|||+.+|.++.++.++++ ++|+|+|+||+|+|++ +.++.|++ ++|+|+||||+.+
T Consensus 211 l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~ 286 (538)
T PLN02466 211 MFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLH----EAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDT 286 (538)
T ss_pred HHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHH----hcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHH
Confidence 999999999999999999999999999988877764 6899999999999965 66888887 8999999999999
Q ss_pred HHHHHHHhhc-CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhc
Q 007627 281 GRMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (595)
Q Consensus 281 g~~v~~~aa~-~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l 359 (595)
|+.|++.|++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++
T Consensus 287 G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 366 (538)
T PLN02466 287 GKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKR 366 (538)
T ss_pred HHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhc
Confidence 9999999995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCce
Q 007627 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (595)
Q Consensus 360 ~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl 439 (595)
++|+|.++++++||+++..++++++++|++|+++|+++++||.+. ...|+|++|||+.+++++|++++||+||||+
T Consensus 367 ~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl 442 (538)
T PLN02466 367 VVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRF----GSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQ 442 (538)
T ss_pred cCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcC----CCCceEEEEEEEecCCCCCchhcCCccCcEE
Confidence 999999999999999999999999999999999999999999742 2368899999999999999999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
+|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++... ...+||||+|.||+|+++|++|++
T Consensus 443 ~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~ 520 (538)
T PLN02466 443 SILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVF--DAAIPFGGYKMSGIGREKGIYSLN 520 (538)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCC--CCCCCcCCCCcCccCcccHHHHHH
Confidence 999999999999999999999999999999999999999999999999986443 335899999999999999999999
Q ss_pred ccceeeEEEEcc
Q 007627 520 ACCLVKSVVEDR 531 (595)
Q Consensus 520 ~~t~~k~v~~~~ 531 (595)
+||+.|+++...
T Consensus 521 ~ft~~k~v~~~~ 532 (538)
T PLN02466 521 NYLQVKAVVTPL 532 (538)
T ss_pred HhcceEEEEEeC
Confidence 999999997643
|
|
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-99 Score=829.05 Aligned_cols=467 Identities=24% Similarity=0.366 Sum_probs=432.8
Q ss_pred ccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 007627 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 131 (595)
Q Consensus 52 ~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~ 131 (595)
+|+|+|+.+ +.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|+++
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 79 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKL 79 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999874 468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHH
Q 007627 132 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211 (595)
Q Consensus 132 ~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ 211 (595)
+++|+||+..++. +|+..+++.++|+++..+.... +..+.. ..+...++.++|+|||++|+|||||+.++++++++
T Consensus 80 ~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 155 (474)
T cd07130 80 VSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYG-LTIPSE--RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAI 155 (474)
T ss_pred HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcC-ccccCC--CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhH
Confidence 9999999999984 7999999999999876554322 111111 12334578899999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhh
Q 007627 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNAS 289 (595)
Q Consensus 212 ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa 289 (595)
||++||+||+|||+.+|+++.++.+++.++|.++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|++.++
T Consensus 156 ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 156 ALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998788899997 9999999999999999999999
Q ss_pred cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCC
Q 007627 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369 (595)
Q Consensus 290 ~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~ 369 (595)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 236 ~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~ 315 (474)
T cd07130 236 ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGT 315 (474)
T ss_pred hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHH
Q 007627 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 449 (595)
Q Consensus 370 ~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~e 449 (595)
++||||++.++++++++|++|+++|+++++||... ..+|+|++|||+.++++ |++++||+||||++|++|+|+||
T Consensus 316 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~e 390 (474)
T cd07130 316 LVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVI----DGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEE 390 (474)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHH
Confidence 99999999999999999999999999999999842 23589999999998866 99999999999999999999999
Q ss_pred HHHHhhcCCCCceeEEecCcHHHHHHHHHH--hccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 450 VVKLANDSRYGLGCAVFSGSQHRAREIAAQ--IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 450 Ai~~aN~~~~gL~asVft~d~~~~~~~~~~--l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
||+++|+++|||++||||+|.+++++++++ +++|+|+||+.... ..+.+||||+|+||+|+++|++|+++||+.|++
T Consensus 391 ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~ 469 (474)
T cd07130 391 AIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTC 469 (474)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCC-CCCCCCcCccccccCCccchHHHHHHHhheEEE
Confidence 999999999999999999999999999987 99999999985433 334589999999999999999999999999998
Q ss_pred EEc
Q 007627 528 VED 530 (595)
Q Consensus 528 ~~~ 530 (595)
..+
T Consensus 470 ~~~ 472 (474)
T cd07130 470 TIN 472 (474)
T ss_pred EEe
Confidence 653
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-99 Score=829.04 Aligned_cols=471 Identities=30% Similarity=0.427 Sum_probs=431.3
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~-W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
++||+|+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+. |+++|..+|.++|++++++|++|+++|
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 79 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDF 79 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 5799999986 4678999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCc-ccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
++++++|+||+..++...|+..+++.++++++..++.... ..+... ...+...+++++|+|||++|+|||||+.++++
T Consensus 80 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~ 158 (481)
T TIGR03216 80 LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTE-CFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTW 158 (481)
T ss_pred HHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCc-cccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHH
Confidence 9999999999999986669999999999999887653221 111100 00123467889999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh--hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~--~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|.+ +.++.|+. ++|+|+||||+.+|+.
T Consensus 159 ~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~----~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~ 234 (481)
T TIGR03216 159 KVGPALACGNTVVVKPSEETPGTATLLGEVMN----AVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSA 234 (481)
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHH----HcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999988887764 6899999999999854 36777876 8999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+
T Consensus 235 i~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~ 314 (481)
T TIGR03216 235 IMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGV 314 (481)
T ss_pred HHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCC-CCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
|.++++++|||+++.++++++++|++|+++|+++++||.....+ ...+|+|++|||+.+++++|++++||+||||++|+
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~ 394 (481)
T TIGR03216 315 PDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIA 394 (481)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEE
Confidence 99999999999999999999999999999999999999743211 12469999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ .+.+||||+|+||+|+++|++|+++||
T Consensus 395 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~f~ 472 (481)
T TIGR03216 395 PFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLR--DLRTPFGGSKLSGIGREGGVHSLEFYT 472 (481)
T ss_pred EeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCcCchHHHHHHhh
Confidence 999999999999999999999999999999999999999999999987654 245899999999999999999999999
Q ss_pred eeeEEEE
Q 007627 523 LVKSVVE 529 (595)
Q Consensus 523 ~~k~v~~ 529 (595)
+.|++..
T Consensus 473 ~~k~v~~ 479 (481)
T TIGR03216 473 ELTNVCI 479 (481)
T ss_pred ceEEEEE
Confidence 9999865
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-99 Score=827.04 Aligned_cols=472 Identities=26% Similarity=0.392 Sum_probs=434.1
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
.+||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||+..++. +|+..+++.+++++...+.. ..+..+.. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 82 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~-~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 157 (478)
T cd07085 82 RLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLL-KGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMF 157 (478)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-CCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence 999999999999984 79999999999988765433 22221110 123356899999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~ 287 (595)
++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|++.
T Consensus 158 ~~ALaaGN~VvlKps~~tp~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~ 233 (478)
T cd07085 158 PMAIACGNTFVLKPSERVPGAAMRLAELLQ----EAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYER 233 (478)
T ss_pred HHHHhcCCEEEEECCCcCcHHHHHHHHHHH----HhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999988887765 689999999999997788899998 79999999999999999999
Q ss_pred hhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCC
Q 007627 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (595)
Q Consensus 288 aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (595)
++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 234 aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~ 313 (478)
T cd07085 234 AAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDP 313 (478)
T ss_pred HhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCH
Q 007627 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (595)
Q Consensus 368 ~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 447 (595)
++++||++++.++++++++|++|+++||++++||.....+...+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 393 (478)
T cd07085 314 GADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTL 393 (478)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999999997533222246899999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC--CCCcHHHHhccceee
Q 007627 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVK 525 (595)
Q Consensus 448 ~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~G~~gl~~~t~~k 525 (595)
||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ...+.+||||+|.||+| +++|++|+++||+.|
T Consensus 394 deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k 472 (478)
T cd07085 394 DEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTK 472 (478)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHHHHhcceE
Confidence 999999999999999999999999999999999999999998743 33345899999999999 578999999999999
Q ss_pred EEEEc
Q 007627 526 SVVED 530 (595)
Q Consensus 526 ~v~~~ 530 (595)
+|+..
T Consensus 473 ~v~~~ 477 (478)
T cd07085 473 TVTSR 477 (478)
T ss_pred EEEEe
Confidence 99754
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-99 Score=829.12 Aligned_cols=466 Identities=30% Similarity=0.500 Sum_probs=431.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~--W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. |+++|.++|.++|++++++|.+|++
T Consensus 4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07142 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 45799999988767788999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++...|+..+++.+++++...++.... ..+.. .....++.++|+|||++|+|||||+.+.+
T Consensus 84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~ 159 (476)
T cd07142 84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGM-TLPAD---GPHHVYTLHEPIGVVGQIIPWNFPLLMFA 159 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceEEEEEeceeeEEEECCCccHHHHHH
Confidence 999999999999999986679999999999998876654321 11111 12345789999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.
T Consensus 160 ~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~ 235 (476)
T cd07142 160 WKVGPALACGNTIVLKPAEQTPLSALLAAKLA----AEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKI 235 (476)
T ss_pred HHHHHHHHcCCEEEEECCCcccHHHHHHHHHH----HHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 99999999999999999999999998887765 46899999999999966 57888887 8999999999999999
Q ss_pred HHHHhhc-CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 284 IMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 284 v~~~aa~-~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
|++.+++ +++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 236 v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G 315 (476)
T cd07142 236 IMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVG 315 (476)
T ss_pred HHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 9999997 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++||+++++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 316 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~ 391 (476)
T cd07142 316 DPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRI----GSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSIL 391 (476)
T ss_pred CCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcC----CCCCeeEccEEeecCCCCChhhhCCccCceEEEE
Confidence 999999999999999999999999999999999999999742 2368999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|+||+|++||++|+++||
T Consensus 392 ~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~ft 469 (476)
T cd07142 392 KFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVF--DASIPFGGYKMSGIGREKGIYALNNYL 469 (476)
T ss_pred eeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCccCcCCccchHHHHHHhh
Confidence 999999999999999999999999999999999999999999999986443 345899999999999999999999999
Q ss_pred eeeEEE
Q 007627 523 LVKSVV 528 (595)
Q Consensus 523 ~~k~v~ 528 (595)
+.|+++
T Consensus 470 ~~k~v~ 475 (476)
T cd07142 470 QVKAVV 475 (476)
T ss_pred heeEEe
Confidence 999985
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-99 Score=821.63 Aligned_cols=454 Identities=28% Similarity=0.505 Sum_probs=423.7
Q ss_pred CCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhh
Q 007627 63 ETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 142 (595)
Q Consensus 63 ~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~e 142 (595)
.++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|++++++|++|+++|++++++|+||+..+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEe
Q 007627 143 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222 (595)
Q Consensus 143 a~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlK 222 (595)
+. +|+..+++.++|++.++++++..+... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|
T Consensus 86 a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~K 160 (462)
T PRK13968 86 AR-AEVAKSANLCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLK 160 (462)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEE
Confidence 85 799999999999999988776543221 1234678999999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCC
Q 007627 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (595)
Q Consensus 223 ps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElG 300 (595)
||+.+|+++.++.+++ .++|+|+|++|+|+|+.+.+..|+. ++|+|+||||+.+|+.|++.|+++++|+++|||
T Consensus 161 Ps~~tp~~~~~l~~~~----~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElG 236 (462)
T PRK13968 161 HAPNVMGCAQLIAQVF----KDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELG 236 (462)
T ss_pred CCCcChHHHHHHHHHH----HHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecC
Confidence 9999999998777665 4689999999999987655556665 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHH
Q 007627 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (595)
Q Consensus 301 Gk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~ 380 (595)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..++
T Consensus 237 Gk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~ 316 (462)
T PRK13968 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLR 316 (462)
T ss_pred CCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCC
Q 007627 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (595)
Q Consensus 381 ~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~g 460 (595)
+++++++++++.+|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 317 ~~~~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~g 392 (462)
T PRK13968 317 DELHHQVEATLAEGARLLLGGEKI----AGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFG 392 (462)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCcC----CCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCc
Confidence 999999999999999999999742 1258999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEcc
Q 007627 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 461 L~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
|++||||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+++|++||++||+.|+|..++
T Consensus 393 Ls~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 461 (462)
T PRK13968 393 LSATIFTTDETQARQMAARLECGGVFINGYCAS--DARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461 (462)
T ss_pred ceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence 999999999999999999999999999987543 345899999999999999999999999999998765
|
|
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-99 Score=826.94 Aligned_cols=473 Identities=33% Similarity=0.495 Sum_probs=436.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHH-----HHHhhcCHHHHHHHHHHHHHHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ-----KVWAKSSFKQRRQFLRILLKYIIE 123 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~-----~~W~~~~~~~R~~~L~~l~~~l~~ 123 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| +.|+++|..+|.++|++++++|++
T Consensus 8 ~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~ 87 (503)
T PLN02467 8 RQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITE 87 (503)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHH
Confidence 578999999987777899999999999999999999999999999999999 899999999999999999999999
Q ss_pred hHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhH
Q 007627 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203 (595)
Q Consensus 124 ~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~ 203 (595)
++++|++++++|+||+..++. .|+..+++.++|+++.+++.......+......+...+++|+|+|||++|+|||||+.
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T PLN02467 88 RKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLL 166 (503)
T ss_pred hHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHH
Confidence 999999999999999999986 6999999999999988877543221111111112357899999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhH
Q 007627 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (595)
Q Consensus 204 ~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~ 280 (595)
++++++++||++||+||+|||+.+|.++..+.++++ ++|+|+|++|+|+|++ +.++.|+. ++|.|+||||+.+
T Consensus 167 ~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~----eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~ 242 (503)
T PLN02467 167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICR----EVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTAT 242 (503)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHH----HcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHH
Confidence 999999999999999999999999999998877654 6899999999999965 67888987 8999999999999
Q ss_pred HHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhcc
Q 007627 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (595)
Q Consensus 281 g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (595)
|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 243 g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 322 (503)
T PLN02467 243 GRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIK 322 (503)
T ss_pred HHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCcee
Q 007627 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 361 ~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
+|+|.++++++|||++..++++++++|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++
T Consensus 323 ~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~ 400 (503)
T PLN02467 323 ISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPE--HLKKGFFIEPTIITDVTTSMQIWREEVFGPVLC 400 (503)
T ss_pred CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC--CCCCCeEEeeEEEeCCCCCChHhhCCCCCceEE
Confidence 999999999999999999999999999999999999999997421 113689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhc
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~ 520 (595)
|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... ...+||||+|.||+|+++|++|+++
T Consensus 401 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ 478 (503)
T PLN02467 401 VKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPC--FCQAPWGGIKRSGFGRELGEWGLEN 478 (503)
T ss_pred EEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccCcCCCcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999986432 3358999999999999999999999
Q ss_pred cceeeEEEEc
Q 007627 521 CCLVKSVVED 530 (595)
Q Consensus 521 ~t~~k~v~~~ 530 (595)
||+.|++...
T Consensus 479 ft~~k~i~~~ 488 (503)
T PLN02467 479 YLSVKQVTKY 488 (503)
T ss_pred hhCeEEEEEe
Confidence 9999999874
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-98 Score=826.93 Aligned_cols=470 Identities=28% Similarity=0.463 Sum_probs=435.2
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~ 81 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA 81 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 56899999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||+..++. +|+..+++.++++++.+++++..+..+.+ ....++.++|+|||++|+|||||+.+.++++
T Consensus 82 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~ 156 (488)
T TIGR02299 82 VLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD----THLNYTVRVPVGPVGLITPWNAPFMLSTWKI 156 (488)
T ss_pred HHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC----CceEEEEEEecceEEEECCCccHHHHHHHHH
Confidence 999999999999986 79999999999999988755544333222 2346789999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
++||++||+||+|||+.+|+++.++.+++ .++|+|+|+||+|+|.+ +.++.|+. .+|+|+||||+.+|+.|++
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 232 (488)
T TIGR02299 157 APALAFGNTVVLKPAEWSPLTAARLAEIA----KEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMR 232 (488)
T ss_pred HHHHHcCCEEEEECchhchHHHHHHHHHH----HHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999988777765 47899999999999855 67888887 8999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (595)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 233 ~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~ 312 (488)
T TIGR02299 233 NGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLD 312 (488)
T ss_pred HHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC---CCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL---SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 367 ~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~---~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
+++++|||+++.++++++++|++++++|+++++||..... +....|+|++|||+.+++++|++++||+||||++|++
T Consensus 313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~ 392 (488)
T TIGR02299 313 PETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIP 392 (488)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEe
Confidence 9999999999999999999999999999999999974211 0013588999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... ...+||||+|.||+|+++|++|+++||+
T Consensus 393 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~~~ 470 (488)
T TIGR02299 393 FKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVR--HLPTPFGGVKASGIGREGGTYSFDFYTE 470 (488)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCCCCCccCcCCccchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999987543 3358999999999999999999999999
Q ss_pred eeEEEEc
Q 007627 524 VKSVVED 530 (595)
Q Consensus 524 ~k~v~~~ 530 (595)
.|+++.+
T Consensus 471 ~k~i~~~ 477 (488)
T TIGR02299 471 TKNVALA 477 (488)
T ss_pred eEEEEEe
Confidence 9999865
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-98 Score=819.99 Aligned_cols=468 Identities=27% Similarity=0.416 Sum_probs=429.5
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
+++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEML 80 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999998777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++...|+..+++.++++++..++..... .+. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 156 (479)
T cd07116 81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI-SEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWK 156 (479)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCee-ecC---CCCceEEEEEeccceEEEECCCchHHHHHHHH
Confidence 99999999999999866799999999999998876532211 111 11234678999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|.++..+.+++++ + +|+|++|+|+|.+ +.+..|++ ++|+|+||||+.+|+.|+
T Consensus 157 ~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 231 (479)
T cd07116 157 LAPALAAGNCVVLKPAEQTPASILVLMELIGD----L-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIM 231 (479)
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----H-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999988775 3 9999999999954 78889986 999999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCC------CCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhc
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDD------VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~d------aDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l 359 (595)
+.++++++|+++|||||||+||++| ||++.|++.++++. +|+||.|++++|||||+++||+|+++|.++++++
T Consensus 232 ~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 310 (479)
T cd07116 232 QYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAI 310 (479)
T ss_pred HHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998 79999999999865 5999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCce
Q 007627 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (595)
Q Consensus 360 ~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl 439 (595)
++|+|.++++++||+++++++++++++|++++++||++++||.....+....|+|++|||+.+++ +|++++||+||||+
T Consensus 311 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl 389 (479)
T cd07116 311 KQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVL 389 (479)
T ss_pred CCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceE
Confidence 99999999999999999999999999999999999999999975322212368999999999875 99999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
+|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... ...+||||+|+||+|+++|++||+
T Consensus 390 ~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~ 467 (479)
T cd07116 390 AVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLY--PAHAAFGGYKQSGIGRENHKMMLD 467 (479)
T ss_pred EEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC--CCCCCcCCCccCcCCccChHHHHH
Confidence 999999999999999999999999999999999999999999999999986443 345899999999999999999999
Q ss_pred ccceeeEEEE
Q 007627 520 ACCLVKSVVE 529 (595)
Q Consensus 520 ~~t~~k~v~~ 529 (595)
+||+.|++..
T Consensus 468 ~~~~~k~~~~ 477 (479)
T cd07116 468 HYQQTKNLLV 477 (479)
T ss_pred HhhceEEEEE
Confidence 9999999865
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-98 Score=815.26 Aligned_cols=452 Identities=27% Similarity=0.497 Sum_probs=421.9
Q ss_pred EEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh
Q 007627 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (595)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~ 145 (595)
++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 81 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK- 81 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred hHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCC
Q 007627 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225 (595)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 225 (595)
+|+..+++.++|+++.+++++......... .....++++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 82 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~ 160 (457)
T PRK09406 82 AEALKCAKGFRYYAEHAEALLADEPADAAA-VGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHAS 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccC-CCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 699999999999999988877543221111 1234568899999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcc
Q 007627 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303 (595)
Q Consensus 226 ~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~ 303 (595)
.+|+++.++.+++. ++|+|+|++|+|+++.+.+..|++ ++|+|+||||+.+|+.|++.+++++||+++||||||
T Consensus 161 ~~p~~~~~l~~l~~----~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~ 236 (457)
T PRK09406 161 NVPQTALYLADLFR----RAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSD 236 (457)
T ss_pred cCcHHHHHHHHHHH----HhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCC
Confidence 99999988777654 689999999999875567788886 999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHH
Q 007627 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383 (595)
Q Consensus 304 p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~ 383 (595)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++
T Consensus 237 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~ 316 (457)
T PRK09406 237 PFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEV 316 (457)
T ss_pred eeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCcee
Q 007627 384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463 (595)
Q Consensus 384 ~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~a 463 (595)
+++|++++++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++
T Consensus 317 ~~~i~~a~~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~ 392 (457)
T PRK09406 317 EKQVDDAVAAGATILCGGKRP----DGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGS 392 (457)
T ss_pred HHHHHHHHHCCCEEEeCCCcC----CCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceE
Confidence 999999999999999999742 2368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEE
Q 007627 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 529 (595)
Q Consensus 464 sVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~ 529 (595)
||||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+++|++|+++||+.|+|..
T Consensus 393 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 393 NAWTRDEAEQERFIDDLEAGQVFINGMTVS--YPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred EEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 999999999999999999999999997654 3358999999999999999999999999999864
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-98 Score=818.96 Aligned_cols=463 Identities=27% Similarity=0.440 Sum_probs=423.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHh
Q 007627 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161 (595)
Q Consensus 82 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~ 161 (595)
..+.+|+++++++|++||.+|++++.++|.++|++++++|++|+++|++++++|+||+..|+..+|+..+++.+++++++
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred chhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 007627 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (595)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~ 241 (595)
+++|++++....+.......++++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~- 161 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTK- 161 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-
Confidence 9999887654433222345678999999999999999999999999999999999999999999999999999888764
Q ss_pred HHhcCCCCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHH
Q 007627 242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 320 (595)
Q Consensus 242 l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i 320 (595)
++|+|++++|+|+.+.+..|++ .+|+|+||||+.+|+.|+++|+++++|+++|||||||+||++|||++.|++.+
T Consensus 162 ----~lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i 237 (493)
T PTZ00381 162 ----YLDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRI 237 (493)
T ss_pred ----hCCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHH
Confidence 3999999999997788999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeec
Q 007627 321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (595)
Q Consensus 321 ~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~g 400 (595)
++|+|.|+||+|++++|||||++++|+|+++|++.+++++ |++.++++++||||+.++++++++++++ +|+++++|
T Consensus 238 ~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~~---~ga~~~~g 313 (493)
T PTZ00381 238 AWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYG 313 (493)
T ss_pred HHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHHh---CCCcEEEC
Confidence 9999999999999999999999999999999999999986 6666788899999999999999999963 68999999
Q ss_pred CCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh
Q 007627 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (595)
Q Consensus 401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l 480 (595)
|.. +..++|++|||+.+++++|++|+||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 314 G~~-----~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~ 388 (493)
T PTZ00381 314 GEV-----DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENT 388 (493)
T ss_pred CCc-----CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhC
Confidence 973 346889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCcch-HHHHHHHH
Q 007627 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN-GFEFQESL 559 (595)
Q Consensus 481 ~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~~~-~~~~~~~~ 559 (595)
++|+|+||+...+...+.+||||+|.||+|++||++||++||+.|+|+.+..+ ...+.+++|||+.. ..++++.+
T Consensus 389 ~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~----~~~~~~~~~pp~~~~~~~~~~~~ 464 (493)
T PTZ00381 389 SSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTG----NSFDLSLRYPPYTSFKSWVLSFL 464 (493)
T ss_pred CcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcccc----ccCcccccCCCCChHHHHHHHHH
Confidence 99999999987666556799999999999999999999999999999887621 12355689988754 45566666
Q ss_pred HHH
Q 007627 560 VEA 562 (595)
Q Consensus 560 ~~~ 562 (595)
++.
T Consensus 465 ~~~ 467 (493)
T PTZ00381 465 LKL 467 (493)
T ss_pred Hhc
Confidence 554
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-98 Score=818.61 Aligned_cols=467 Identities=27% Similarity=0.423 Sum_probs=431.3
Q ss_pred cccccCCcccCCCCCCeEEeecCC-CCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
+++||+|+|+.+. ..++++||+ ||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|.+|+++
T Consensus 1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 78 (473)
T cd07097 1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEE 78 (473)
T ss_pred CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3578999998764 347999999 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+|||..++. .|+..+++.++|+++..+++..+.. +. ...+...++.++|+|||++|+|||||+.++++
T Consensus 79 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~ 154 (473)
T cd07097 79 LARLLTREEGKTLPEAR-GEVTRAGQIFRYYAGEALRLSGETL-PS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAW 154 (473)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-cc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHH
Confidence 99999999999999985 5999999999999988776543321 11 11234568999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|
T Consensus 155 ~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~----~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i 230 (473)
T cd07097 155 KIAPALAYGNTVVFKPAELTPASAWALVEILE----EAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRI 230 (473)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH----HcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 99999999999999999999999998887754 6899999999999975 67888987 89999999999999999
Q ss_pred HHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCC
Q 007627 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (595)
Q Consensus 285 ~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (595)
++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 231 ~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 310 (473)
T cd07097 231 AAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDA 310 (473)
T ss_pred HHHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 365 ~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
.++++++|||+++.++++++++|++|+++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 311 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 388 (473)
T cd07097 311 LDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKR--PDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRV 388 (473)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEeccCCCCChhhhCCCcCceEEEecc
Confidence 999999999999999999999999999999999999974321 135889999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccce
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCL 523 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~ 523 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+.. +.+||||+|.||+| +++|++|+++||+
T Consensus 389 ~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~-~~~PfGG~~~SG~G~~~~g~~~l~~f~~ 467 (473)
T cd07097 389 RDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVD-YHVPFGGRKGSSYGPREQGEAALEFYTT 467 (473)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCC-CCCCCCCcccccCcccCCcHHHHHHhhc
Confidence 999999999999999999999999999999999999999999998654433 45899999999999 9999999999999
Q ss_pred eeEEE
Q 007627 524 VKSVV 528 (595)
Q Consensus 524 ~k~v~ 528 (595)
.|+|.
T Consensus 468 ~k~v~ 472 (473)
T cd07097 468 IKTVY 472 (473)
T ss_pred eeEEe
Confidence 99985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-98 Score=819.42 Aligned_cols=467 Identities=29% Similarity=0.456 Sum_probs=434.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~---~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
+++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|+++++.|.++.
T Consensus 7 ~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T cd07141 7 TKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDR 86 (481)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 4679999999877778999999999999999999999999999999999998 6999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..++...|+..+++.++++++..+++.... .+.. .....++.++|+|||++|+|||||+.++
T Consensus 87 ~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 162 (481)
T cd07141 87 AYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKT-IPMD---GDFFTYTRHEPVGVCGQIIPWNFPLLMA 162 (481)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCce-ecCC---CCceEEEEEeceeEEEEEccChhHHHHH
Confidence 99999999999999987767799999999999998877764421 1111 1234678999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|+|+|++ +.++.|+. ++|.|+||||+.+|+
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~ 238 (481)
T cd07141 163 AWKLAPALACGNTVVLKPAEQTPLTALYLASLI----KEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGK 238 (481)
T ss_pred HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHH----HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 999999999999999999999999998877765 46899999999999965 67888887 899999999999999
Q ss_pred HHHHHhhc-CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~~aa~-~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++.+++ ++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 239 ~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 318 (481)
T cd07141 239 LIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVV 318 (481)
T ss_pred HHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 99999987 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++||||++.++++++++|++|+++|+++++||+.. ...|+|++|||+.+++++|++++||+||||++|
T Consensus 319 G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 394 (481)
T cd07141 319 GNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH----GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 394 (481)
T ss_pred CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhccccCCeEEE
Confidence 9999999999999999999999999999999999999999842 236899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++|
T Consensus 395 ~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~f 472 (481)
T cd07141 395 FKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYGLQEY 472 (481)
T ss_pred EeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHHHHHH
Confidence 999999999999999999999999999999999999999999999998653 344589999999999999999999999
Q ss_pred ceeeEEEE
Q 007627 522 CLVKSVVE 529 (595)
Q Consensus 522 t~~k~v~~ 529 (595)
|+.|+++.
T Consensus 473 t~~k~v~~ 480 (481)
T cd07141 473 TEVKTVTI 480 (481)
T ss_pred hheEEEEE
Confidence 99999864
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-97 Score=817.47 Aligned_cols=466 Identities=27% Similarity=0.438 Sum_probs=432.1
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
..+||+|+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+++++|
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 81 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEF 81 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 357999999875 5678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++...|+..+++.+++++...+....+.. +.. ..+...+++++|+|||++|+|||||+.+++++
T Consensus 82 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~ 158 (475)
T PRK13473 82 ARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAA-GEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWK 158 (475)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCceeEEEEecceeEEEEccCChHHHHHHHH
Confidence 999999999999888656999999999999877665433211 110 12335678999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++..+.+++.+ + +|+|++|+|+|. .+.++.|++ ++|.|+||||+.+|+.|+
T Consensus 159 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~ 233 (475)
T PRK13473 159 LAPALAAGNTVVLKPSEITPLTALKLAELAAD----I-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVL 233 (475)
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHHHHHHH----h-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999988888764 5 999999999995 478899987 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 234 ~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 313 (475)
T PRK13473 234 SAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPD 313 (475)
T ss_pred HHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcC-CeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~G-a~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
++++++|||+++.++++++++|++++++| +++++||... ...|+|++|||+.+++++|.+++||+||||++|++|
T Consensus 314 ~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 389 (475)
T PRK13473 314 DEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAP----DGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPF 389 (475)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcC----CCCceeEcCEEEecCCCCChhhhCCccCCeEEEecc
Confidence 99999999999999999999999999999 9999999842 235889999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+.+||||+|.||+|++||++|+++||+.
T Consensus 390 ~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~t~~ 467 (475)
T PRK13473 390 DDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKQSGYGKDMSLYGLEDYTVV 467 (475)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHHhce
Confidence 9999999999999999999999999999999999999999999997654 34589999999999999999999999999
Q ss_pred eEEEE
Q 007627 525 KSVVE 529 (595)
Q Consensus 525 k~v~~ 529 (595)
|+++.
T Consensus 468 k~i~~ 472 (475)
T PRK13473 468 RHVMV 472 (475)
T ss_pred EEEEE
Confidence 99865
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-99 Score=760.23 Aligned_cols=455 Identities=27% Similarity=0.448 Sum_probs=425.1
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcC
Q 007627 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167 (595)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~ 167 (595)
+++.++++|.+|.+-++.+.+.|.++|+++.+.+++|.++|.+++..|.+|+..|+...|+...++.+++++++.++|.+
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 45668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCC
Q 007627 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247 (595)
Q Consensus 168 ~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGl 247 (595)
|++.+..+.....+.+++.+|+|||++|+|||||+.+.+.|+++||+|||+||+||||.+|.++.++++++.++ +
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-----l 158 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-----L 158 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-----c
Confidence 99888776666788999999999999999999999999999999999999999999999999999999999887 8
Q ss_pred CCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHH
Q 007627 248 PENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 326 (595)
Q Consensus 248 p~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~ 326 (595)
|.++++||.|+.++..+|++ ++|+|+||||+.+|+.||.+|+++++||+||||||||++|++|+|++.++++|+||++.
T Consensus 159 d~~~~~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~ 238 (477)
T KOG2456|consen 159 DQDLIRVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWM 238 (477)
T ss_pred CcceEEEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhc
Confidence 99999999999877777777 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC
Q 007627 327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 406 (595)
Q Consensus 327 n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~ 406 (595)
|+||+|+|+++|+++.+++.+|+++++..+++++ |....++.|+++|||..||+|+.+++++. .+++.||..
T Consensus 239 N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~--- 310 (477)
T KOG2456|consen 239 NSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES--- 310 (477)
T ss_pred cCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc---
Confidence 9999999999999999999999999999999996 76677889999999999999999999753 589999983
Q ss_pred CCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCee
Q 007627 407 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486 (595)
Q Consensus 407 ~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~ 486 (595)
++...|++||||.||++++++|+||+|||||||+.++|+||+|+++|+.+.+|++|+||+|.+...++.+++.+|.|.
T Consensus 311 --d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt 388 (477)
T KOG2456|consen 311 --DESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVT 388 (477)
T ss_pred --chhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCee
Confidence 567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccccccccccCCCCCCCCC-cchHHHHHHHHHH
Q 007627 487 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPV-AENGFEFQESLVE 561 (595)
Q Consensus 487 IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~-~~~~~~~~~~~~~ 561 (595)
+||...|.....+||||+|.||+|+|||++||+.|||.|++..++++. ..-..+|||| +.++.++++.+++
T Consensus 389 ~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~----d~~~~~RYPP~S~~K~~~lr~~~~ 460 (477)
T KOG2456|consen 389 VNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGG----DKLLALRYPPYSPQKLTLLRFLLE 460 (477)
T ss_pred ecceEEEEEeeccCcCCcCccccccccccccccccccchhhhhccccc----chhhhhcCCCCChHHHHHHHHHHH
Confidence 999999988888999999999999999999999999999998776531 2223689998 4556666666654
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-97 Score=815.42 Aligned_cols=467 Identities=30% Similarity=0.484 Sum_probs=432.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH-HHh-hcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWA-KSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~-~W~-~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||. .|+ ++|.++|.++|+++++.|++|++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 5689999999877778899999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++...|+..+++.++++++.+++.... ..+.. .+...++.++|+|||++|+|||||+.+++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~~~ 162 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQ-VIETD---IKKLTYTRHEPIGVCGQIIPWNFPLLMCA 162 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cccCC---CCceEEEEEecceeEEEECCCcChHHHHH
Confidence 999999999999997766679999999999999877654221 11111 22356789999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+.+|+.
T Consensus 163 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l----~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~ 238 (481)
T cd07143 163 WKIAPALAAGNTIVLKPSELTPLSALYMTKLI----PEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRK 238 (481)
T ss_pred HHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHH----HhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHH
Confidence 99999999999999999999999998877765 46899999999999965 67888887 8999999999999999
Q ss_pred HHHHhhc-CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 284 IMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 284 v~~~aa~-~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
|++.|++ +++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 239 i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G 318 (481)
T cd07143 239 VMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVG 318 (481)
T ss_pred HHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCC
Confidence 9999985 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++||++++.++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 319 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~ 394 (481)
T cd07143 319 DPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRH----GNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVI 394 (481)
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCceEEeeEEEecCCCCChhhhcCCcCCeEEEE
Confidence 999999999999999999999999999999999999999742 2368999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++... .+.+||||+|.||+|++||++|+++||
T Consensus 395 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~~t 472 (481)
T cd07143 395 KFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLL--HHQVPFGGYKQSGIGRELGEYALENYT 472 (481)
T ss_pred eeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCC--CCCCCCCCccccccCcccHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999997443 345899999999999999999999999
Q ss_pred eeeEEEE
Q 007627 523 LVKSVVE 529 (595)
Q Consensus 523 ~~k~v~~ 529 (595)
+.|+++.
T Consensus 473 ~~k~i~~ 479 (481)
T cd07143 473 QIKAVHI 479 (481)
T ss_pred CeEEEEE
Confidence 9999875
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-97 Score=820.01 Aligned_cols=468 Identities=22% Similarity=0.340 Sum_probs=429.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH-hHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE-HQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~-~~~ 126 (595)
..+||+|+|+.+ +.+++++||+| |+++++++.++.+|+++++++|++||+.|+++|..+|.++|++++++|++ +++
T Consensus 33 ~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (522)
T cd07123 33 IPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRY 110 (522)
T ss_pred cCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHH
Confidence 457999999864 56899999995 99999999999999999999999999999999999999999999999996 899
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecc-eEEEEEcCcchhhHhh
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNI 205 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pl-GVV~~I~p~N~P~~~~ 205 (595)
+|++++++|+||+..++...|+...++.++|++..++++........ ..+...++.++|+ |||++|+|||||+.+.
T Consensus 111 ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~ 187 (522)
T cd07123 111 ELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSS---PAGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187 (522)
T ss_pred HHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCceEEEECCcccHHHHH
Confidence 99999999999999988666888999999999988877654322111 1134568999998 9999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
.+++++|| +||+||+|||+.+|+++..+.+++. ++|+|+|+||+|+|++ +.++.|+. ++|+|+||||+.+|+
T Consensus 188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~----~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~ 262 (522)
T cd07123 188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILE----EAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFK 262 (522)
T ss_pred HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHH----HcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHH
Confidence 99999999 5999999999999999988877654 6899999999999976 57899987 999999999999999
Q ss_pred HHHHHhhcCCC------cEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHH
Q 007627 283 MIMRNASKTLT------PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356 (595)
Q Consensus 283 ~v~~~aa~~l~------pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~ 356 (595)
.|++.|+++++ |+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++
T Consensus 263 ~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 342 (522)
T cd07123 263 SLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEEL 342 (522)
T ss_pred HHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHH
Confidence 99999999987 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhc-CCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccc
Q 007627 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAF 435 (595)
Q Consensus 357 ~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~-Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~F 435 (595)
+++++|+|.++++++||||+.+++++++++|++|+++ ||++++||... ...|+|++|||+.+++++|++++||+|
T Consensus 343 ~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~----~~~g~f~~PTvl~~v~~~~~i~~eEiF 418 (522)
T cd07123 343 KEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCD----DSVGYFVEPTVIETTDPKHKLMTEEIF 418 (522)
T ss_pred hhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcC----CCCCceEcCEEEeCCCCCChhhhcCCC
Confidence 9999999999999999999999999999999999999 99999999731 235899999999999999999999999
Q ss_pred cCceeEEeeCC--HHHHHHHhhcCC-CCceeEEecCcHHHHHHHHHHh--ccCCeeecCCCcccccCCCCCCCcCCCCCC
Q 007627 436 GPIMPIMKFNT--DEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASNYMCQSLPFGGVKDSGFG 510 (595)
Q Consensus 436 GPVl~v~~~~~--~~eAi~~aN~~~-~gL~asVft~d~~~~~~~~~~l--~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G 510 (595)
|||++|++|+| +||||+++|+++ |||++||||+|.+++.++++++ ++|+|+||+...+...+.+||||+|.||+|
T Consensus 419 GPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~g 498 (522)
T cd07123 419 GPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTN 498 (522)
T ss_pred CCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCC
Confidence 99999999985 799999999985 9999999999999999999996 599999999866654456899999999996
Q ss_pred -CCCcHHHHhccceeeEEEEc
Q 007627 511 -RFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 511 -~~~G~~gl~~~t~~k~v~~~ 530 (595)
+++|.+++++||+.|++++.
T Consensus 499 g~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 499 DKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cccCCHHHHHHhcceEEEEEe
Confidence 99999999999999999764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-97 Score=816.55 Aligned_cols=469 Identities=30% Similarity=0.471 Sum_probs=433.9
Q ss_pred ccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 52 ~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
||+|+|..+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6899998776678899999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||+..++. .|+..+++.++++++..++... +..+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 155 (482)
T cd07119 81 RLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETG-EVYDVP---PHVISRTVREPVGVCGLITPWNYPLLQAAWKL 155 (482)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccCC---CCceEEEEEeeeeeEEEEcCCchHHHHHHHHH
Confidence 999999999999985 6999999999999988876332 221111 23457899999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|++
T Consensus 156 ~~ALaaGN~VilKps~~~p~~~~~l~~~~~----~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~ 231 (482)
T cd07119 156 APALAAGNTVVIKPSEVTPLTTIALFELIE----EAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMR 231 (482)
T ss_pred HHHHhcCCEEEEECCccccHHHHHHHHHHH----HcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999988887765 6899999999999976 57888997 8999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (595)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 232 ~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~ 311 (482)
T cd07119 232 AAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLD 311 (482)
T ss_pred HHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCC
Q 007627 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (595)
Q Consensus 367 ~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~ 446 (595)
+++++||++++.++++++++|++|+++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 312 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 391 (482)
T cd07119 312 ADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT 391 (482)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC
Confidence 99999999999999999999999999999999999743221123689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeE
Q 007627 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 526 (595)
Q Consensus 447 ~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~ 526 (595)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+++|++|+++||+.|+
T Consensus 392 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~ 469 (482)
T cd07119 392 EEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPY--FAEAPWGGYKQSGIGRELGPTGLEEYQETKH 469 (482)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCcccCcCCccchHHHHHHHhceEE
Confidence 99999999999999999999999999999999999999999986443 3458999999999999999999999999999
Q ss_pred EEEcc
Q 007627 527 VVEDR 531 (595)
Q Consensus 527 v~~~~ 531 (595)
++.+.
T Consensus 470 v~~~~ 474 (482)
T cd07119 470 ININL 474 (482)
T ss_pred EEEec
Confidence 97753
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-97 Score=814.80 Aligned_cols=470 Identities=30% Similarity=0.505 Sum_probs=433.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~-W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|..+.++.+++++||+||+++++++.++.+|+++++++|++||+. |+++|.++|.++|+++++.|.+++++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 87 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDL 87 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 56899999988766778999999999999999999999999999999999996 88999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++...|+..+++.+++++++.+++... ..+.. .+...++.++|+|||++|+|||||+.++++
T Consensus 88 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~-~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~ 163 (484)
T cd07144 88 LAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGK-TIPTS---PNKLAYTLHEPYGVCGQIIPWNYPLAMAAW 163 (484)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCc-eecCC---CCceEEEEEecceEEEEECcCCCHHHHHHH
Confidence 99999999999988765679999999999999988776321 11111 233467899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+.+|+.|
T Consensus 164 ~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~----~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i 239 (484)
T cd07144 164 KLAPALAAGNTVVIKPAENTPLSLLYFANLV----KEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLV 239 (484)
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHH----HHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHH
Confidence 9999999999999999999999998877765 46899999999999964 77888987 89999999999999999
Q ss_pred HHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh-ccCCC
Q 007627 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGP 363 (595)
Q Consensus 285 ~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~-l~~G~ 363 (595)
++.|+++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++ +++|+
T Consensus 240 ~~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~ 319 (484)
T cd07144 240 MKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGS 319 (484)
T ss_pred HHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985 89999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
|.++++++|||+++.++++++++|++|+++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++
T Consensus 320 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~ 398 (484)
T cd07144 320 PFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPE-GLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISK 398 (484)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcc-cCCCCceECCEEEeCCCCCCchhhCCCCCceEEEec
Confidence 9999999999999999999999999999999999999974221 113689999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+.+||||+|.||+|+++|++|+++||+
T Consensus 399 ~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~ 476 (484)
T cd07144 399 FKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDS--DVGVPFGGFKMSGIGRELGEYGLETYTQ 476 (484)
T ss_pred cCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999987432 3458999999999999999999999999
Q ss_pred eeEEEE
Q 007627 524 VKSVVE 529 (595)
Q Consensus 524 ~k~v~~ 529 (595)
.|+|+.
T Consensus 477 ~k~v~~ 482 (484)
T cd07144 477 TKAVHI 482 (484)
T ss_pred eEEEEE
Confidence 999865
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-96 Score=813.92 Aligned_cols=473 Identities=31% Similarity=0.506 Sum_probs=435.1
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
..++|.+.+ +.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|.+++++|
T Consensus 19 ~~~~~~~~~--~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~el 96 (524)
T PRK09407 19 LRRLTARVD--GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREEL 96 (524)
T ss_pred HHHHHhhcC--CCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 344555543 446778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++ ..|+..+++.++|+++++++++.++...... ......++.++|+|||++|+|||||+.+++++
T Consensus 97 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~ 174 (524)
T PRK09407 97 LDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGAL-PVLTKTTELRQPKGVVGVISPWNYPLTLAVSD 174 (524)
T ss_pred HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccccC-CCCceEEEEEecceEEEEEeCCCChHHHHHHH
Confidence 999999999999998 5799999999999999998887755432211 11246788999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHhCCCEEEEeCChhHHHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRN 287 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~~vd~I~ftGS~~~g~~v~~~ 287 (595)
+++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|++ +.++.|++++|.|+||||+.+|++|++.
T Consensus 175 ~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~----eaGlP~gvv~~v~g~~~~~~~~L~~~~d~V~fTGs~~~g~~v~~~ 250 (524)
T PRK09407 175 AIPALLAGNAVVLKPDSQTPLTALAAVELLY----EAGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQ 250 (524)
T ss_pred HHHHHHcCCEEEEECCCCCHHHHHHHHHHHH----HcCCCcccEEEEecCCchHHHHHHhcCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999999998887754 6899999999999965 6788888889999999999999999999
Q ss_pred hhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCC
Q 007627 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (595)
Q Consensus 288 aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (595)
++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 251 aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 330 (524)
T PRK09407 251 AGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDY 330 (524)
T ss_pred HHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCH
Q 007627 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (595)
Q Consensus 368 ~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 447 (595)
++++|||+++.+++++++++++++++||++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 331 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 407 (524)
T PRK09407 331 SADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARP---DLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADV 407 (524)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC---CCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCH
Confidence 99999999999999999999999999999999997321 125799999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcc-cccCCCCCCCcCCCCCCCCCcHHHHhccceeeE
Q 007627 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 526 (595)
Q Consensus 448 ~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~-~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~ 526 (595)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+.... ...+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 408 deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~ 487 (524)
T PRK09407 408 DEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQT 487 (524)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEE
Confidence 9999999999999999999999999999999999999999996542 233458999999999999999999999999999
Q ss_pred EEEccc
Q 007627 527 VVEDRW 532 (595)
Q Consensus 527 v~~~~~ 532 (595)
|+.+++
T Consensus 488 v~~~~~ 493 (524)
T PRK09407 488 IATQRV 493 (524)
T ss_pred EEEccc
Confidence 988753
|
|
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-97 Score=816.56 Aligned_cols=472 Identities=22% Similarity=0.332 Sum_probs=432.7
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-Hh
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII-EH 124 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~-~~ 124 (595)
....+||+|+|+.+ ++.+++++||+| |+++++++.++.+|+++++++|++||+.|+++|..+|.++|++++++|+ ++
T Consensus 30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~ 108 (533)
T TIGR01236 30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPY 108 (533)
T ss_pred eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhc
Confidence 44678999999875 456899999997 8999999999999999999999999999999999999999999999999 59
Q ss_pred HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecc-eEEEEEcCcchhhH
Q 007627 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFH 203 (595)
Q Consensus 125 ~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pl-GVV~~I~p~N~P~~ 203 (595)
+++|++++++|+||+..++...++..+++.++|++..++++........ ..+..+++.++|+ |||++|+|||||+.
T Consensus 109 ~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwN~P~~ 185 (533)
T TIGR01236 109 REEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSES---APGEWNRTDYRPLEGFVYAISPFNFTAI 185 (533)
T ss_pred HHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCCEEEEEeCCchHHH
Confidence 9999999999999999998654499999999999988777644321111 1234578999999 99999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhH
Q 007627 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (595)
Q Consensus 204 ~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~ 280 (595)
...+++++|| +||+||+|||+.+|+++..+.+++. ++|+|+|+||+|+|++ +.++.|+. ++|+|+||||+.+
T Consensus 186 ~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~----~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~ 260 (533)
T TIGR01236 186 AGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILE----EAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTAT 260 (533)
T ss_pred HHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHH----hcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHH
Confidence 9999999999 7999999999999999998887754 6899999999999964 77889987 9999999999999
Q ss_pred HHHHHHHhhcCCCc------EeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHH
Q 007627 281 GRMIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354 (595)
Q Consensus 281 g~~v~~~aa~~l~p------v~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~ 354 (595)
|+.|++.++++++| +++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++
T Consensus 261 G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 340 (533)
T TIGR01236 261 FKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLA 340 (533)
T ss_pred HHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHH
Confidence 99999999999974 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcC--CeEeecCCCCCCCCCCCCcccCCeeeecCCCCCccccc
Q 007627 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG--AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 432 (595)
Q Consensus 355 ~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~G--a~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~e 432 (595)
+++++++|+|.++++++||||++.++++++++|++++++| +++++||... ...|+|++|||+.+++++|++++|
T Consensus 341 ~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~----~~~G~~~~PTvl~~~~~d~~i~~e 416 (533)
T TIGR01236 341 ELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYD----DSEGYFVEPTVILSKDPTDPLMVE 416 (533)
T ss_pred HHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcc
Confidence 9999999999999999999999999999999999999987 7999999741 236899999999999999999999
Q ss_pred ccccCceeEEeeCC--HHHHHHHh-hcCCCCceeEEecCcHHHHHHHHHHhc--cCCeeecCCCcccccCCCCCCCcCCC
Q 007627 433 EAFGPIMPIMKFNT--DEEVVKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDS 507 (595)
Q Consensus 433 E~FGPVl~v~~~~~--~~eAi~~a-N~~~~gL~asVft~d~~~~~~~~~~l~--~G~v~IN~~~~~~~~~~~PfGG~~~S 507 (595)
|+||||++|++|+| +||||+++ |+++|||++||||+|.+++.+++++++ +|+|+||+.......+.+||||+|.|
T Consensus 417 E~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~S 496 (533)
T TIGR01236 417 EIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGS 496 (533)
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccc
Confidence 99999999999998 49999999 899999999999999999999999977 99999998766554456899999999
Q ss_pred CCC-CCCcHHHHhccceeeEEEEcc
Q 007627 508 GFG-RFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 508 G~G-~~~G~~gl~~~t~~k~v~~~~ 531 (595)
|+| +++|.+||++||+.|++....
T Consensus 497 G~G~~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 497 GTNDKAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cCCcccCCHHHHHHhcceEEEEEEc
Confidence 998 999999999999999998765
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-97 Score=810.02 Aligned_cols=464 Identities=30% Similarity=0.484 Sum_probs=429.4
Q ss_pred ccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 007627 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 131 (595)
Q Consensus 52 ~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~ 131 (595)
||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 68999988767789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHH
Q 007627 132 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211 (595)
Q Consensus 132 ~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ 211 (595)
+++|+||+..++...|+..+++.++++++..++... ...+.. .....++.++|+|||++|+|||||+.++++++++
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGG-EIIPLP---IPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAP 156 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCC-ccccCC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHH
Confidence 999999999998667999999999999988776432 111111 1134678999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHHHHh
Q 007627 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (595)
Q Consensus 212 ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~a 288 (595)
||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|+ .+.++.|+. ++|+|+||||+.+|+.|++.+
T Consensus 157 ALaaGN~VvlKps~~tp~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a 232 (467)
T TIGR01804 157 ALAAGNAMVFKPSEITPLTALKVAELME----EAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAA 232 (467)
T ss_pred HHhcCCEEEeeCCccCcHHHHHHHHHHH----HcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999988877654 689999999999997 477888887 799999999999999999999
Q ss_pred hcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCC
Q 007627 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368 (595)
Q Consensus 289 a~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~ 368 (595)
++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 233 ~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 312 (467)
T TIGR01804 233 ADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEA 312 (467)
T ss_pred HhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHH
Q 007627 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE 448 (595)
Q Consensus 369 ~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~ 448 (595)
+++|||+++.++++++++|++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 392 (467)
T TIGR01804 313 TEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSED 392 (467)
T ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHH
Confidence 99999999999999999999999999999999974322222368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 449 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 449 eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++||+.|
T Consensus 393 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 393 EVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPY--PAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 999999999999999999999999999999999999999987543 345899999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-97 Score=809.56 Aligned_cols=462 Identities=29% Similarity=0.458 Sum_probs=430.8
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 007627 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (595)
Q Consensus 51 ~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~ 130 (595)
+||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|.+|+++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 47999999877778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHH
Q 007627 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (595)
Q Consensus 131 ~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~ 210 (595)
++++|+||+..++...|+..+++.++++++.++++..+.. ....++.++|+|||++|+|||||+.+++++++
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 152 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER--------RGNSLVVREPIGVCGLITPWNWPLNQIVLKVA 152 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc--------CceEEEEEeecceEEEECCCccHHHHHHHHHH
Confidence 9999999999988667999999999999988876543221 12457789999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHH
Q 007627 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (595)
Q Consensus 211 ~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~ 287 (595)
+||++||+||+|||+.+|+++.++.+++. ++|+|+|+||+|+|++ +.++.|++ ++|.|+||||+.+|+.|++.
T Consensus 153 ~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~----~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 228 (466)
T cd07138 153 PALAAGCTVVLKPSEVAPLSAIILAEILD----EAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEA 228 (466)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999988877654 6899999999999976 57888887 89999999999999999999
Q ss_pred hhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCC
Q 007627 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (595)
Q Consensus 288 aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (595)
++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 229 aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 308 (466)
T cd07138 229 AADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDP 308 (466)
T ss_pred HhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCH
Q 007627 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (595)
Q Consensus 368 ~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 447 (595)
++++|||+++.+++++++++++|+++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|.
T Consensus 309 ~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~-~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~ 387 (466)
T cd07138 309 ATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPE-GLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDE 387 (466)
T ss_pred CCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-cCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCH
Confidence 999999999999999999999999999999999863211 1136899999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 448 ~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
||||+++|+++|||++||||+|.++++++++++++|+|+||+.. ..+.+||||+|.||+|+++|++|+++||+.|++
T Consensus 388 ~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v 464 (466)
T cd07138 388 DEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSI 464 (466)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhcceeEE
Confidence 99999999999999999999999999999999999999999853 234589999999999999999999999999997
Q ss_pred E
Q 007627 528 V 528 (595)
Q Consensus 528 ~ 528 (595)
+
T Consensus 465 ~ 465 (466)
T cd07138 465 Q 465 (466)
T ss_pred e
Confidence 5
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-97 Score=815.98 Aligned_cols=468 Identities=26% Similarity=0.407 Sum_probs=433.5
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+ +.+++++||+| |+++++++.++.+|+++++++|++||+.|++++..+|.++|++++++|.+++++
T Consensus 33 ~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (512)
T cd07124 33 YPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFE 110 (512)
T ss_pred cceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 467999999864 56899999998 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..|+. .|+..+++.++|+++.++++ ..+..+.. .+..+++.++|+|||++|+|||||+.++++
T Consensus 111 la~~~~~e~Gk~~~ea~-~ev~~~i~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 185 (512)
T cd07124 111 LAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRL-RGFPVEMV---PGEDNRYVYRPLGVGAVISPWNFPLAILAG 185 (512)
T ss_pred HHHHHHHHcCcCHHHHH-HHHHHHHHHHHHHHHHHHHh-cCccccCC---CCceeEEEEecceEEEEECCCChHHHHHHH
Confidence 99999999999999995 59999999999999998876 22222211 234678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|
T Consensus 186 ~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i 261 (512)
T cd07124 186 MTTAALVTGNTVVLKPAEDTPVIAAKLVEILE----EAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRI 261 (512)
T ss_pred HHHHHHHcCCEEEEECCccccHHHHHHHHHHH----HhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHH
Confidence 99999999999999999999999998877664 6899999999999965 67888987 89999999999999999
Q ss_pred HHHhhc------CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh
Q 007627 285 MRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (595)
Q Consensus 285 ~~~aa~------~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~ 358 (595)
++.+++ +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus 262 ~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~ 341 (512)
T cd07124 262 YERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKA 341 (512)
T ss_pred HHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHh
Confidence 999987 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCc
Q 007627 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (595)
Q Consensus 359 l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPV 438 (595)
+++|+|.++++++|||+++.++++++++|+++++ |+++++||..... .+.|+|++|||+.+++++|++++||+||||
T Consensus 342 ~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPv 418 (512)
T cd07124 342 LKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLEL--AAEGYFVQPTIFADVPPDHRLAQEEIFGPV 418 (512)
T ss_pred CCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCC--CCCCceEcCEEEecCCCCChHHhCCCcCCe
Confidence 9999999999999999999999999999999998 8999999974321 136899999999999999999999999999
Q ss_pred eeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHH
Q 007627 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEG 517 (595)
Q Consensus 439 l~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~g 517 (595)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+...+...+.+||||+|.||+| +.+|++|
T Consensus 419 l~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~ 498 (512)
T cd07124 419 LAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDY 498 (512)
T ss_pred EEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHH
Confidence 999999999999999999999999999999999999999999999999999866555456899999999999 7889999
Q ss_pred HhccceeeEEEEc
Q 007627 518 LRACCLVKSVVED 530 (595)
Q Consensus 518 l~~~t~~k~v~~~ 530 (595)
+++||+.|+|+.+
T Consensus 499 ~~~~t~~k~v~~~ 511 (512)
T cd07124 499 LLQFMQPKTVTEN 511 (512)
T ss_pred HHHhccEEEEEEe
Confidence 9999999998753
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-96 Score=807.61 Aligned_cols=459 Identities=32% Similarity=0.491 Sum_probs=423.8
Q ss_pred CcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 007627 55 PRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 134 (595)
Q Consensus 55 g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~ 134 (595)
|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35666555678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHh
Q 007627 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF 214 (595)
Q Consensus 135 e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALa 214 (595)
|+||+..++. .|+..+++.++++++..++... ...+. ...+...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 81 e~Gk~~~~a~-~Ev~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 156 (465)
T cd07151 81 ESGSTRIKAN-IEWGAAMAITREAATFPLRMEG-RILPS--DVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALA 156 (465)
T ss_pred HcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcC-ccccC--CCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHH
Confidence 9999999985 5999999999999887655421 11111 112445788999999999999999999999999999999
Q ss_pred cCCEEEEecCCCchhHH-HHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhc
Q 007627 215 SGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK 290 (595)
Q Consensus 215 aGN~VVlKps~~~p~s~-~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~ 290 (595)
+||+||+|||+.+|.++ .++. ++|.++|+|+|++|+|+|++ +.++.|++ .+|+|+||||+.+|+.|++.+++
T Consensus 157 aGN~Vi~Kps~~~p~~~~~~l~----~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 232 (465)
T cd07151 157 LGNAVVLKPASDTPITGGLLLA----KIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR 232 (465)
T ss_pred cCCEEEEECCCCCcHhHHHHHH----HHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999996 4444 45667999999999999864 67888987 79999999999999999999999
Q ss_pred CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCC
Q 007627 291 TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 370 (595)
Q Consensus 291 ~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~ 370 (595)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 233 ~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 312 (465)
T cd07151 233 HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTV 312 (465)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHH
Q 007627 371 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEV 450 (595)
Q Consensus 371 ~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eA 450 (595)
+|||+++.+++++++++++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 313 ~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 385 (465)
T cd07151 313 VGPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEA 385 (465)
T ss_pred cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCC-------cCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHH
Confidence 99999999999999999999999999999987 25889999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEE
Q 007627 451 VKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 529 (595)
Q Consensus 451 i~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~ 529 (595)
|+++|+++|||++||||+|.++++++++++++|+|+||+..... .+.+||||+|+||+|+++|++||++||+.|+++.
T Consensus 386 i~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~ 463 (465)
T cd07151 386 LELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVND-EPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISV 463 (465)
T ss_pred HHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccCCcCChHHHHHHhhceEEEEe
Confidence 99999999999999999999999999999999999999976543 3458999999999999999999999999999875
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-97 Score=811.33 Aligned_cols=466 Identities=29% Similarity=0.465 Sum_probs=433.0
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 51 ~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~--W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
+||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. |+++|..+|.++|++++++|++|+++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 589999987766678999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++...|+..+++.++++++..+++...+..+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~ 157 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGS---GGGHVLVRREPVGVVAAIVPWNAPLFLAALK 157 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC---CCceEEEEEEeccEEEEEcCCchHHHHHHHH
Confidence 9999999999998876679999999999999988776543332221 2345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
+++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|+|+|+.+.++.|++ ++|.|+||||+.+|+.|++
T Consensus 158 i~~ALaaGN~VvlKps~~~p~~~~~l~~~~----~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~ 233 (471)
T cd07139 158 IAPALAAGCTVVLKPSPETPLDAYLLAEAA----EEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAA 233 (471)
T ss_pred HHHHHhcCCEEEEECCCcCCHHHHHHHHHH----HHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999998777665 5689999999999997788888987 7999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (595)
.++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 234 ~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 313 (471)
T cd07139 234 VCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLD 313 (471)
T ss_pred HHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCC
Q 007627 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (595)
Q Consensus 367 ~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~ 446 (595)
+++++|||+++.++++++++|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 314 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 391 (471)
T cd07139 314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPA--GLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDD 391 (471)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC--CCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCC
Confidence 999999999999999999999999999999999997422 113588999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeE
Q 007627 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 526 (595)
Q Consensus 447 ~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~ 526 (595)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.. . .+.+||||+|.||+|++||++|+++||+.|+
T Consensus 392 ~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~--~-~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~ 468 (471)
T cd07139 392 EDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR--L-DFGAPFGGFKQSGIGREGGPEGLDAYLETKS 468 (471)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC--C-CCCCCCCCcccccCCccchHHHHHHHhceeE
Confidence 999999999999999999999999999999999999999999865 2 3458999999999999999999999999999
Q ss_pred EE
Q 007627 527 VV 528 (595)
Q Consensus 527 v~ 528 (595)
|+
T Consensus 469 i~ 470 (471)
T cd07139 469 IY 470 (471)
T ss_pred Ee
Confidence 85
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-96 Score=807.30 Aligned_cols=463 Identities=54% Similarity=0.906 Sum_probs=434.5
Q ss_pred ecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHH
Q 007627 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (595)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei 148 (595)
+||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++...|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999877899
Q ss_pred HhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCch
Q 007627 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (595)
Q Consensus 149 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p 228 (595)
..+++.++|+++++++++.++..+.+....+...++.++|+|||++|+|||||+.+++.++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999999988876655443333212345678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEE
Q 007627 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306 (595)
Q Consensus 229 ~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~I 306 (595)
+++..+++++.++|.++|+|+|++|+|+|+.+.+++|+. ++|.|.||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i 240 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 999999999999999999999999999998788999997 899999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHH
Q 007627 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386 (595)
Q Consensus 307 V~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~ 386 (595)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++++++++
T Consensus 241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~ 320 (465)
T cd07098 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL 320 (465)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEe
Q 007627 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466 (595)
Q Consensus 387 i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVf 466 (595)
+++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~ 400 (465)
T cd07098 321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF 400 (465)
T ss_pred HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999874322222468999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEcc
Q 007627 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 467 t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
|+|.+.++++++++++|.|+||+..+....+.+||||+|.||+|+++|++|+++||+.|++..+|
T Consensus 401 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~~ 465 (465)
T cd07098 401 GKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTEDR 465 (465)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEeC
Confidence 99999999999999999999999766655566999999999999999999999999999998754
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-97 Score=810.91 Aligned_cols=466 Identities=30% Similarity=0.489 Sum_probs=431.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA--KSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~--~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+ ++|.++|.++|+++++.|.++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4679999998876778899999999999999999999999999999999999855 99999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++...|+..+++.++++++..++.... ..+.. .+...++.++|+|||++|+|||||+.+++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 159 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGK-TIPID---GNFLAYTRREPIGVCGQIIPWNFPLLMLA 159 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cccCC---CCceEEEEEeceeEEEEECCCcCHHHHHH
Confidence 999999999999997776679999999999998876654322 11111 23456889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+.+|+.
T Consensus 160 ~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~----~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~ 235 (476)
T cd07091 160 WKLAPALAAGNTVVLKPAEQTPLSALYLAELIK----EAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRT 235 (476)
T ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHH----HcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHH
Confidence 999999999999999999999999988887765 6899999999999965 67888887 8999999999999999
Q ss_pred HHHHhhc-CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 284 IMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 284 v~~~aa~-~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
|++.+++ +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 236 v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g 315 (476)
T cd07091 236 IMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVG 315 (476)
T ss_pred HHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCC
Confidence 9999998 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++||++++.++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 316 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~ 391 (476)
T cd07091 316 DPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERH----GSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTIL 391 (476)
T ss_pred CCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCceECcEEecCCCCCChhhhCCCCCCeEEEe
Confidence 999999999999999999999999999999999999999742 2368999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|.||+|+++|++|+++||
T Consensus 392 ~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~f~ 469 (476)
T cd07091 392 KFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVF--DAAVPFGGFKQSGFGRELGEEGLEEYT 469 (476)
T ss_pred ecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCcccCcCCccchHHHHHHhh
Confidence 999999999999999999999999999999999999999999999986443 345899999999999999999999999
Q ss_pred eeeEEE
Q 007627 523 LVKSVV 528 (595)
Q Consensus 523 ~~k~v~ 528 (595)
+.|++.
T Consensus 470 ~~k~~~ 475 (476)
T cd07091 470 QVKAVT 475 (476)
T ss_pred ceeEEe
Confidence 999985
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-96 Score=808.54 Aligned_cols=471 Identities=29% Similarity=0.470 Sum_probs=434.3
Q ss_pred cccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 51 IYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 51 ~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
+||+|+|+.+.++.+++++||+| ++++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|.+|+++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999998776678999999999 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||+..++. .|+..+++.++++++..++.. .+..+.. +.....+++++|+|||++|+|||||+.++++++
T Consensus 81 ~~~~~e~Gk~~~~~~-~ev~~~i~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 156 (478)
T cd07131 81 RLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLF-GETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKI 156 (478)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhC-CcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHH
Confidence 999999999999985 699999999999998877632 2222221 123356899999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+.|++
T Consensus 157 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 232 (478)
T cd07131 157 FPALVCGNTVVFKPAEDTPACALKLVELFA----EAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGE 232 (478)
T ss_pred HHHHHcCCEEEEECCCcCcHHHHHHHHHHH----hcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999988877654 6899999999999966 57888887 8999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (595)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 233 ~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 312 (478)
T cd07131 233 TCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLD 312 (478)
T ss_pred HHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCC
Q 007627 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (595)
Q Consensus 367 ~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~ 446 (595)
+++++||++++.++++++++|++|+++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 313 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~ 392 (478)
T cd07131 313 EETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSS 392 (478)
T ss_pred CCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCC
Confidence 99999999999999999999999999999999999753322124689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceee
Q 007627 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVK 525 (595)
Q Consensus 447 ~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k 525 (595)
+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+. .+.+||||+|.||+| +++|++|+++||+.|
T Consensus 393 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k 471 (478)
T cd07131 393 LEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGA-EVHLPFGGVKKSGNGHREAGTTALDAFTEWK 471 (478)
T ss_pred HHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCC-CCCCCCCCcccccCCCcCCcHHHHHHhhheE
Confidence 999999999999999999999999999999999999999999976543 345999999999999 788999999999999
Q ss_pred EEEEc
Q 007627 526 SVVED 530 (595)
Q Consensus 526 ~v~~~ 530 (595)
+|+.+
T Consensus 472 ~i~~~ 476 (478)
T cd07131 472 AVYVD 476 (478)
T ss_pred EEEEe
Confidence 99764
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-96 Score=804.00 Aligned_cols=451 Identities=32% Similarity=0.572 Sum_probs=420.8
Q ss_pred ecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHH
Q 007627 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (595)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei 148 (595)
.||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|.+|+++|++++++|+||+..++ .+|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev 79 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHA-FEEV 79 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH-HHHH
Confidence 389999999999999999999999999999999999999999999999999999999999999999999999998 5799
Q ss_pred HhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCch
Q 007627 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (595)
Q Consensus 149 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p 228 (595)
..+++.++|+++++.+++++...+.... .....+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p 158 (454)
T cd07101 80 LDVAIVARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTA 158 (454)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 9999999999999988877654332211 134678999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHhCCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEE
Q 007627 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307 (595)
Q Consensus 229 ~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV 307 (595)
+++..+.+++. ++|+|+|++|+|+|++ +.++.|++.+|.|+||||+.+|+.|++.++++++|+++|||||||+||
T Consensus 159 ~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~l~~~~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV 234 (454)
T cd07101 159 LTALWAVELLI----EAGLPRDLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIV 234 (454)
T ss_pred HHHHHHHHHHH----HcCcCCCcEEEEeCCcHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEE
Confidence 99988877754 6899999999999965 678888888899999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHH
Q 007627 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387 (595)
Q Consensus 308 ~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i 387 (595)
++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++++++++++++
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEec
Q 007627 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467 (595)
Q Consensus 388 ~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft 467 (595)
++++++|+++++||... + +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 315 ~~a~~~Ga~vl~gg~~~--~-~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 391 (454)
T cd07101 315 DDAVAKGATVLAGGRAR--P-DLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWT 391 (454)
T ss_pred HHHHHCCCEEEeCCCCC--C-CCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEc
Confidence 99999999999998732 1 23579999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCCcc-cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 468 GSQHRAREIAAQIQCGVAAINDFASN-YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 468 ~d~~~~~~~~~~l~~G~v~IN~~~~~-~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+|.+++.++++++++|+|+||+...+ ...+.+||||+|.||+|+++|++|+++||+.|++.
T Consensus 392 ~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 392 RDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred CCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence 99999999999999999999997553 23445899999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-96 Score=811.33 Aligned_cols=466 Identities=25% Similarity=0.401 Sum_probs=431.6
Q ss_pred cccccCCcccCCCCCCeEEeecCC-CCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|.+++++
T Consensus 33 ~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (511)
T TIGR01237 33 YPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHE 110 (511)
T ss_pred cceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 457999999864 4579999999 4999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. .|+..+++.++|++++++++.+... +. ...+..++++++|+|||++|+|||||+.++++
T Consensus 111 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~ 186 (511)
T TIGR01237 111 LNALICLEVGKIIPEAD-AEVAEAIDFCEYYAREMERLAGQGV-NL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVG 186 (511)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-cC--CCCCceeEEEEecceeEEEECCCCcHHHHHHH
Confidence 99999999999999985 6999999999999999887765321 11 12345678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|++ +.++.|++ ++|.|+||||+.+|+.|
T Consensus 187 ~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i 262 (511)
T TIGR01237 187 MTVAPIVTGNCVVLKPAETSTVIAAKIVEILI----EAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRI 262 (511)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHH
Confidence 99999999999999999999999988887654 6899999999999964 78899997 89999999999999999
Q ss_pred HHHhh------cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh
Q 007627 285 MRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (595)
Q Consensus 285 ~~~aa------~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~ 358 (595)
++.|+ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++
T Consensus 263 ~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~ 342 (511)
T TIGR01237 263 YEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRS 342 (511)
T ss_pred HHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHh
Confidence 99988 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCc
Q 007627 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (595)
Q Consensus 359 l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPV 438 (595)
+++|+|.++++++||++++.+++++++++++++++| ++++||.. ....|+|++|||+.+++++|++++||+||||
T Consensus 343 l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~----~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPV 417 (511)
T TIGR01237 343 LNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCD----APSEGYFIGPTIFKDVDRHARLAQEEIFGPV 417 (511)
T ss_pred CCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCcc----CCCCCeEEcCEEEeCCCCCChHhhCCCcCCe
Confidence 999999999999999999999999999999999999 78998863 1236899999999999999999999999999
Q ss_pred eeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCC-CCcHHH
Q 007627 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEG 517 (595)
Q Consensus 439 l~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~G~~g 517 (595)
++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++......+.+||||+|.||+|+ ++|++|
T Consensus 418 l~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~ 497 (511)
T TIGR01237 418 VAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDY 497 (511)
T ss_pred EEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHH
Confidence 9999999999999999999999999999999999999999999999999998665544558999999999996 789999
Q ss_pred HhccceeeEEEE
Q 007627 518 LRACCLVKSVVE 529 (595)
Q Consensus 518 l~~~t~~k~v~~ 529 (595)
+++||+.|+++.
T Consensus 498 l~~~~~~k~v~~ 509 (511)
T TIGR01237 498 LLQFMQPKTVTE 509 (511)
T ss_pred HHHhcceEEEEE
Confidence 999999999865
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-96 Score=806.37 Aligned_cols=465 Identities=24% Similarity=0.396 Sum_probs=427.2
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
.+||+|+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~-~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (487)
T PRK09457 2 TLWINGDWIAGQ-GEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELA 80 (487)
T ss_pred CceECCEEecCC-CCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 478999998763 5679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||+..++. .|+..+++.++++++...++..+.. .. ..+...+++++|+|||++|+|||||+.++++++
T Consensus 81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 155 (487)
T PRK09457 81 EVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKR-SE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHI 155 (487)
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcee-cc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHH
Confidence 999999999999985 6999999999998887776654322 11 123456899999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~ 287 (595)
++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|+++
T Consensus 156 ~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~----~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 231 (487)
T PRK09457 156 VPALLAGNTVVFKPSELTPWVAELTVKLWQ----QAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQ 231 (487)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999998887765 689999999999997788999987 99999999999999999998
Q ss_pred hhcC-CCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchH-HHHHHHHHHHHHhccCCCCC
Q 007627 288 ASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 288 aa~~-l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~ 365 (595)
++++ .+++++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|.
T Consensus 232 aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~ 311 (487)
T PRK09457 232 FAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWD 311 (487)
T ss_pred HhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCC
Confidence 7765 578999999999999999999999999999999999999999999999999998 99999999999999999996
Q ss_pred -CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 366 -AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 366 -~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
++++++|||++..+++++++++++++++|+++++||... +.+|+|++|||+ +++++|++++||+||||++|++|
T Consensus 312 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~ 386 (487)
T PRK09457 312 AEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQL----QAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRY 386 (487)
T ss_pred cCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcc----CCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEe
Confidence 788999999999999999999999999999999988632 246799999999 79999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+..... .+.+||||+|.||+||++|..+ .+||+.
T Consensus 387 ~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~-~~~~~~ 464 (487)
T PRK09457 387 DDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGA-SSAAPFGGVGASGNHRPSAYYA-ADYCAY 464 (487)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCC-CCCCCCCCcccccCCCCCchhH-hhheee
Confidence 99999999999999999999999999999999999999999999875543 3458999999999999999666 559999
Q ss_pred eEEEEcc
Q 007627 525 KSVVEDR 531 (595)
Q Consensus 525 k~v~~~~ 531 (595)
|++..+.
T Consensus 465 k~~~~~~ 471 (487)
T PRK09457 465 PMASLES 471 (487)
T ss_pred eEEEEec
Confidence 9988764
|
|
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-96 Score=807.35 Aligned_cols=466 Identities=28% Similarity=0.414 Sum_probs=428.0
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||++|++++..+|.++|+++++.|++|+++
T Consensus 15 ~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~e 94 (496)
T PLN00412 15 VYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAP 94 (496)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35689999999876678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccc-cCC-cc--cccccceEEEecceEEEEEcCcchhhH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR-SSG-RS--MIHKKAKVEFHPLGVVGAIVSWNYPFH 203 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~-~~~-~~--~~~~~~~v~~~PlGVV~~I~p~N~P~~ 203 (595)
|++++++|+||+..++. +|+..+++.++|+++++.+++..... ... .. ..+...+++++|+|||++|+|||||+.
T Consensus 95 l~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 173 (496)
T PLN00412 95 IAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVN 173 (496)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHH
Confidence 99999999999999984 79999999999999887776543211 110 00 012235688999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhH
Q 007627 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (595)
Q Consensus 204 ~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~ 280 (595)
++++++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+|+|++ +.++.|+. ++|.|+|||| .+
T Consensus 174 ~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~ 248 (496)
T PLN00412 174 LAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCF----HLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DT 248 (496)
T ss_pred HHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHH----HHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HH
Confidence 99999999999999999999999999998888765 46899999999999975 67888887 7999999999 99
Q ss_pred HHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhcc
Q 007627 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (595)
Q Consensus 281 g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (595)
|+.|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 249 g~~v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 326 (496)
T PLN00412 249 GIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT 326 (496)
T ss_pred HHHHHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence 999999886 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCcee
Q 007627 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 361 ~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
+|+|.+ ++++||+++.++++++.++|++|+++|+++++||. ..|+|++|||+.+++++|++++||+||||++
T Consensus 327 ~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~ 398 (496)
T PLN00412 327 VGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLP 398 (496)
T ss_pred cCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCeEEecEEEeCCCCCCHHHhCcCCCCeEE
Confidence 999976 78999999999999999999999999999999775 3689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhc
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~ 520 (595)
|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++.... .+.+||||+|.||+|++||++|+++
T Consensus 399 v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~~~ 477 (496)
T PLN00412 399 VIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARG-PDHFPFQGLKDSGIGSQGITNSINM 477 (496)
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCC-CCCCCCCCccccccCCCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999975432 3358999999999999999999999
Q ss_pred cceeeEEEEc
Q 007627 521 CCLVKSVVED 530 (595)
Q Consensus 521 ~t~~k~v~~~ 530 (595)
||+.|+++.+
T Consensus 478 ft~~k~i~~~ 487 (496)
T PLN00412 478 MTKVKSTVIN 487 (496)
T ss_pred hcceEEEEEe
Confidence 9999999764
|
|
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-96 Score=808.12 Aligned_cols=466 Identities=27% Similarity=0.476 Sum_probs=432.1
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|.+|++
T Consensus 20 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 99 (494)
T PRK09847 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAE 99 (494)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999998877778899999999999999999999999999999999997 59999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++...|+..+++.++|+++.++++.... .+.. .+...++.++|+|||++|+|||||+.+++
T Consensus 100 ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (494)
T PRK09847 100 ELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEV-ATTS---SHELAMIVREPVGVIAAIVPWNFPLLLTC 175 (494)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccCC---CCceeEEEecceeEEEEECCCccHHHHHH
Confidence 9999999999999988866799999999999999888765422 1111 23346789999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|+|+|.+ +.++.|+. ++|.|+||||+.+|+.
T Consensus 176 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~----~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~ 251 (494)
T PRK09847 176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGLA----KEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQ 251 (494)
T ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHH----HHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999998887764 46899999999999965 67888887 8999999999999999
Q ss_pred HHHHhh-cCCCcEeecCCCcceEEEcCCC-CHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 284 IMRNAS-KTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 284 v~~~aa-~~l~pv~lElGGk~p~IV~~da-Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
|++.|+ ++++|+++|||||||+||++|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 252 v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 331 (494)
T PRK09847 252 LLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQP 331 (494)
T ss_pred HHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 999998 5899999999999999999997 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++|||+++.++++++++|++|+++| ++++||.. ...+.|++|||+.+++++|++++||+||||++|
T Consensus 332 g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~-----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v 405 (494)
T PRK09847 332 GHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRN-----AGLAAAIGPTIFVDVDPNASLSREEIFGPVLVV 405 (494)
T ss_pred CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCcc-----CCCCceEeeEEEeCCCCCChHHhCcCcCceEEE
Confidence 999999999999999999999999999999999 99999873 235779999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++... ...+||||+|.||+|+++|.+|+++|
T Consensus 406 ~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~f 483 (494)
T PRK09847 406 TRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDG--DMTVPFGGYKQSGNGRDKSLHALEKF 483 (494)
T ss_pred EecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCcccccCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999997543 33489999999999999999999999
Q ss_pred ceeeEEEEc
Q 007627 522 CLVKSVVED 530 (595)
Q Consensus 522 t~~k~v~~~ 530 (595)
|+.|+|...
T Consensus 484 t~~k~v~~~ 492 (494)
T PRK09847 484 TELKTIWIS 492 (494)
T ss_pred hceEEEEEe
Confidence 999999753
|
|
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-96 Score=805.27 Aligned_cols=469 Identities=21% Similarity=0.269 Sum_probs=418.6
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A-~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
++||+|+|+.+. +.+++++||+||+++++++.++ +|+++|+++|++| |+.|++++..+|.++|++++++|++|+++|
T Consensus 2 ~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~l 79 (513)
T cd07128 2 QSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDL 79 (513)
T ss_pred ceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999998864 5789999999999999999875 8999999999998 799999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccc-cCC----ccccc-ccceEEEec-ceEEEEEcCcchh
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR-SSG----RSMIH-KKAKVEFHP-LGVVGAIVSWNYP 201 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~-~~~----~~~~~-~~~~v~~~P-lGVV~~I~p~N~P 201 (595)
+++ ++|+||+..++. .|+..+++.++|+++++++++.+... ..+ ..... ...++.++| +|||++|+|||||
T Consensus 80 a~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P 157 (513)
T cd07128 80 YAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFP 157 (513)
T ss_pred HHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccH
Confidence 996 899999999985 69999999999999998877542111 000 00001 135688999 5999999999999
Q ss_pred hHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEeeeCCh-hHHHHHHhCCCEEEEeCChh
Q 007627 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSPG 279 (595)
Q Consensus 202 ~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aG-lp~g~v~vv~g~~-~~~~~L~~~vd~I~ftGS~~ 279 (595)
+.++++++++||++||+||+|||+.+|+++.++.+++. ++| +|+|++|+|+|++ +.++.| ..+|+|+||||++
T Consensus 158 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----eaG~lP~gv~~~v~g~~~~~~~~l-~~~d~v~fTGS~~ 232 (513)
T cd07128 158 VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIV----ESGLLPEGALQLICGSVGDLLDHL-GEQDVVAFTGSAA 232 (513)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHH----HhCCCCCCcEEEecCChHHHhccc-CCCCEEEEECCHH
Confidence 99999999999999999999999999999998888765 689 9999999999864 333332 2789999999999
Q ss_pred HHHHHHHHh--hcCCCcEeecCCCcceEEEcCCCC-----HHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHH
Q 007627 280 VGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352 (595)
Q Consensus 280 ~g~~v~~~a--a~~l~pv~lElGGk~p~IV~~daD-----l~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L 352 (595)
+|++|++.+ +++++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 999999985 489999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC---CCCCCCcccCCeeeecCCCC--C
Q 007627 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL---SEGAVDQYFPPTVIVNVNHT--M 427 (595)
Q Consensus 353 ~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~---~~~~~g~~~~PTvl~~v~~~--~ 427 (595)
+++++++++|+|.++++++|||+++.++++++++|++|+++ |++++||....+ +....|+|++|||+.+++++ |
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 99999999999999999999999999999999999999988 999999974321 11236899999999999874 8
Q ss_pred cccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc--cCCeeecCCCc-------ccccCC
Q 007627 428 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFAS-------NYMCQS 498 (595)
Q Consensus 428 ~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~--~G~v~IN~~~~-------~~~~~~ 498 (595)
.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++|+ +|+|+||+... ....+.
T Consensus 392 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~ 471 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQ 471 (513)
T ss_pred hHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCC
Confidence 999999999999999999999999999999999999999999999999999997 99999998642 122345
Q ss_pred CCCCCcCCCCCCCCC-cHHHHhccceeeEEE
Q 007627 499 LPFGGVKDSGFGRFA-GVEGLRACCLVKSVV 528 (595)
Q Consensus 499 ~PfGG~~~SG~G~~~-G~~gl~~~t~~k~v~ 528 (595)
+||||+|.||+|+++ |.+|+++|++.|+|.
T Consensus 472 ~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 472 LVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 899999999999994 799999999999985
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-96 Score=809.04 Aligned_cols=465 Identities=25% Similarity=0.390 Sum_probs=431.1
Q ss_pred cccccCCcccCCCCCCeEEeecCC-CCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..+||+|+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|++++..+|.++|++++++|.+++++
T Consensus 37 ~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 114 (514)
T PRK03137 37 YPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHE 114 (514)
T ss_pred cceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 457999999874 5679999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. +|+..+++.+++++++++++...+.... ..+..++++++|+|||++|+|||||+.++++
T Consensus 115 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 115 FSAWLVKEAGKPWAEAD-ADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 99999999999999985 6999999999999998887653332211 1345678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i 266 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLE----EAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRI 266 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHH
Confidence 99999999999999999999999988877654 6899999999999965 67888987 89999999999999999
Q ss_pred HHHhhc------CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh
Q 007627 285 MRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (595)
Q Consensus 285 ~~~aa~------~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~ 358 (595)
++.|++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 267 ~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~ 346 (514)
T PRK03137 267 YERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKE 346 (514)
T ss_pred HHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHh
Confidence 999987 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCc
Q 007627 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (595)
Q Consensus 359 l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPV 438 (595)
+++|+|.+++ ++||++++.++++++++|++++++ +++++||... ...|+|++|||+.+++++|++++||+||||
T Consensus 347 l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPv 420 (514)
T PRK03137 347 LTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGD----DSKGYFIQPTIFADVDPKARIMQEEIFGPV 420 (514)
T ss_pred CCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcC----CCCceEEeeEEEeCCCCCCHHHhCCCCCce
Confidence 9999999888 999999999999999999999987 6999999731 236899999999999999999999999999
Q ss_pred eeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHH
Q 007627 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEG 517 (595)
Q Consensus 439 l~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~g 517 (595)
++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+| +++|.+|
T Consensus 421 l~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~ 500 (514)
T PRK03137 421 VAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDY 500 (514)
T ss_pred EEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHH
Confidence 999999999999999999999999999999999999999999999999999766655556899999999999 6899999
Q ss_pred HhccceeeEEEE
Q 007627 518 LRACCLVKSVVE 529 (595)
Q Consensus 518 l~~~t~~k~v~~ 529 (595)
+++||+.|+|..
T Consensus 501 l~~ft~~k~v~~ 512 (514)
T PRK03137 501 LLLFLQAKTVSE 512 (514)
T ss_pred HHHhceEEEEEE
Confidence 999999999865
|
|
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-96 Score=803.97 Aligned_cols=463 Identities=29% Similarity=0.451 Sum_probs=430.0
Q ss_pred CCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 007627 40 DDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119 (595)
Q Consensus 40 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~ 119 (595)
.|-.......++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++
T Consensus 13 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~ 92 (480)
T cd07111 13 AWLDAHDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIAR 92 (480)
T ss_pred HHhhhccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 35444555677899999988766788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcc
Q 007627 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 199 (595)
Q Consensus 120 ~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N 199 (595)
+|.+++++|++++++|+||+..+++..|+..+++.++++.+..+... .....++|+|||++|+|||
T Consensus 93 ~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~--------------~~~~~~~P~GVV~~I~PwN 158 (480)
T cd07111 93 HIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD--------------TELAGWKPVGVVGQIVPWN 158 (480)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------CCcccceecceEEEECCCc
Confidence 99999999999999999999999876699999999888766554311 1234689999999999999
Q ss_pred hhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCC
Q 007627 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGS 277 (595)
Q Consensus 200 ~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS 277 (595)
||+.++++++++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|+|+|+.+.+..|++ ++|.|+||||
T Consensus 159 ~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs 234 (480)
T cd07111 159 FPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEIC----AEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGS 234 (480)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH----HhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECC
Confidence 999999999999999999999999999999998887765 4689999999999998788888887 7999999999
Q ss_pred hhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHH
Q 007627 278 PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (595)
Q Consensus 278 ~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~ 357 (595)
+.+|+.|++.++++++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 235 ~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~ 314 (480)
T cd07111 235 TEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMS 314 (480)
T ss_pred HHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccC
Q 007627 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (595)
Q Consensus 358 ~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGP 437 (595)
++++|+|.++++++||++++.++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 315 ~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP 390 (480)
T cd07111 315 HLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADL----PSKGPFYPPTLFTNVPPASRIAQEEIFGP 390 (480)
T ss_pred hcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcCCCCCC
Confidence 99999999999999999999999999999999999999999998732 23689999999999999999999999999
Q ss_pred ceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHH
Q 007627 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG 517 (595)
Q Consensus 438 Vl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~g 517 (595)
|++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||+.... .+.+||||+|.||+|++||++|
T Consensus 391 vl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~ 468 (480)
T cd07111 391 VLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLF--DAAAGFGGYRESGFGREGGKEG 468 (480)
T ss_pred eeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCC--CCCCCcCCcccccCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999997553 3358999999999999999999
Q ss_pred HhccceeeE
Q 007627 518 LRACCLVKS 526 (595)
Q Consensus 518 l~~~t~~k~ 526 (595)
+++||+.|+
T Consensus 469 ~~~~~~~k~ 477 (480)
T cd07111 469 LYEYLRPSW 477 (480)
T ss_pred HHHHhhccC
Confidence 999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-96 Score=800.04 Aligned_cols=444 Identities=32% Similarity=0.550 Sum_probs=413.5
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhH
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~E 147 (595)
++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. +|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 79 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-GE 79 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999984 69
Q ss_pred HHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCc
Q 007627 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (595)
Q Consensus 148 i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~ 227 (595)
+..+++.++|++...++..... .+.. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~ 156 (448)
T TIGR01780 80 ILYAASFLEWFAEEAKRVYGDT-IPSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQT 156 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcCcc-ccCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccc
Confidence 9999999999998776654321 1111 123455778999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC-h-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcc
Q 007627 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303 (595)
Q Consensus 228 p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~-~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~ 303 (595)
|+++..+.+++. ++|+|+|++|+|+|+ + +.++.|++ ++|.|+||||+.+|+.|++.|+++++|+++||||||
T Consensus 157 p~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~ 232 (448)
T TIGR01780 157 PLSALALARLAE----QAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNA 232 (448)
T ss_pred hHHHHHHHHHHH----HcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCC
Confidence 999998888764 689999999999997 4 67888887 899999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHH
Q 007627 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383 (595)
Q Consensus 304 p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~ 383 (595)
|+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++
T Consensus 233 ~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v 312 (448)
T TIGR01780 233 PFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKV 312 (448)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCcee
Q 007627 384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463 (595)
Q Consensus 384 ~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~a 463 (595)
+++|++|+++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 313 ~~~i~~a~~~Ga~il~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~ 388 (448)
T TIGR01780 313 EKHIADAVEKGAKVVTGGKRH----ELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAA 388 (448)
T ss_pred HHHHHHHHHCCCEEEeCCCcC----CCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceE
Confidence 999999999999999999742 2368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 464 sVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
||||+|.++++++++++++|+|+||+.... .+.+||||+|.||+|+++|++|+++||+.|
T Consensus 389 ~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 389 YFFSRDLATIWRVAEALEYGMVGINTGLIS--NVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred EEECCCHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 999999999999999999999999997543 335899999999999999999999999875
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-96 Score=801.78 Aligned_cols=471 Identities=26% Similarity=0.341 Sum_probs=432.5
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
++||+|+|+.+.+++.++++||.||+++++++.++.+|+++++++|++||+.|+++|..+|.++|++++++|.+++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999877667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
++++.|+||+..++. +|+..+++.+++++...+..... ..+.. ..+...++.++|+|||++|+|||||+.++++++
T Consensus 82 ~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~ 157 (477)
T TIGR01722 82 ELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGE-TSTQV--ATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMF 157 (477)
T ss_pred HHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceEEEEEcccceEEEEccCChHHHHHHHHH
Confidence 999999999999985 79999999999988776654322 11110 112345789999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~ 287 (595)
++||++||+||+|||+.+|+++..+.+++ .++|+|+|++|+|+|+.+.++.|++ ++|.|+||||+.+|+.|++.
T Consensus 158 ~~ALaaGN~VilKps~~~p~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~ 233 (477)
T TIGR01722 158 PIAIACGNTFVLKPSEKVPSAAVKLAELF----SEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTT 233 (477)
T ss_pred HHHHhcCCEEEeeCcccChHHHHHHHHHH----HHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999998776654 5689999999999997778888887 99999999999999999999
Q ss_pred hhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCC
Q 007627 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (595)
Q Consensus 288 aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (595)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.++
T Consensus 234 a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~ 312 (477)
T TIGR01722 234 GSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDP 312 (477)
T ss_pred HHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCH
Q 007627 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (595)
Q Consensus 368 ~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 447 (595)
++++||||+++++++++++|++|+++|+++++||.....+...+|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 313 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~ 392 (477)
T TIGR01722 313 GAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTL 392 (477)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCH
Confidence 99999999999999999999999999999999997532222246899999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC--CCCcHHHHhccceee
Q 007627 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVK 525 (595)
Q Consensus 448 ~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~G~~gl~~~t~~k 525 (595)
||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... ....+||||+|.||+| +++|.+|+++||+.|
T Consensus 393 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k 471 (477)
T TIGR01722 393 EEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPV-PLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGK 471 (477)
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCCCCccccccCCCCccChHHHHHHhcCee
Confidence 9999999999999999999999999999999999999999985433 3345899999999999 578999999999999
Q ss_pred EEEEc
Q 007627 526 SVVED 530 (595)
Q Consensus 526 ~v~~~ 530 (595)
+++..
T Consensus 472 ~i~~~ 476 (477)
T TIGR01722 472 TVTTR 476 (477)
T ss_pred EEEEe
Confidence 98764
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-96 Score=800.28 Aligned_cols=450 Identities=31% Similarity=0.474 Sum_probs=417.8
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhH
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~E 147 (595)
++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+..++ .+|
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~e 79 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAM-LGD 79 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999998 579
Q ss_pred HHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCc
Q 007627 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (595)
Q Consensus 148 i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~ 227 (595)
+..+++.++|+++..++ +..+..+.. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~a~~~~~-~~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~ 155 (456)
T cd07107 80 VMVAAALLDYFAGLVTE-LKGETIPVG---GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQA 155 (456)
T ss_pred HHHHHHHHHHHHHHHHH-hCCccccCC---CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCC
Confidence 99999999999876544 333322222 13456789999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcce
Q 007627 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304 (595)
Q Consensus 228 p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p 304 (595)
|+++..+.+++++ ++|+|+||+|+|++ +.++.|++ ++|+|+||||+.+|+.|++.++++++|+++|||||||
T Consensus 156 p~~~~~l~~~~~~-----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p 230 (456)
T cd07107 156 PLSALRLAELARE-----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNA 230 (456)
T ss_pred hHHHHHHHHHHHH-----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCe
Confidence 9999999888764 38999999999976 57889997 7999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHH-HHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHH
Q 007627 305 FIVCDDVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383 (595)
Q Consensus 305 ~IV~~daDl~~aa~~i~~~~-f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~ 383 (595)
+||++|||++.|++.+++|+ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 231 ~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v 310 (456)
T cd07107 231 LIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRV 310 (456)
T ss_pred EEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHH
Confidence 99999999999999999995 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCcee
Q 007627 384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463 (595)
Q Consensus 384 ~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~a 463 (595)
+++|++|+++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 311 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a 390 (456)
T cd07107 311 MHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTA 390 (456)
T ss_pred HHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceE
Confidence 99999999999999999975332223468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEE
Q 007627 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 529 (595)
Q Consensus 464 sVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~ 529 (595)
||||+|.++++++++++++|+|+||++.... +.+||||+|+||+|+++|++|+++||+.|++..
T Consensus 391 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (456)
T cd07107 391 AIWTNDISQAHRTARRVEAGYVWINGSSRHF--LGAPFGGVKNSGIGREECLEELLSYTQEKNVNV 454 (456)
T ss_pred EEECCCHHHHHHHHHhcCcCEEEECCCCCCC--CCCCcCCcccccCCcCchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999976543 358999999999999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-96 Score=802.07 Aligned_cols=464 Identities=31% Similarity=0.502 Sum_probs=430.6
Q ss_pred ccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 007627 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 131 (595)
Q Consensus 52 ~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~ 131 (595)
||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 68999987767788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHH
Q 007627 132 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211 (595)
Q Consensus 132 ~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ 211 (595)
+++|+||+..++. .|+..+++.+++++..+++..... .+.. ..+...+++++|+|||++|+|||||+.++++++++
T Consensus 81 ~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~a~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (468)
T cd07088 81 IVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGEI-IPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAP 156 (468)
T ss_pred HHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCcc-ccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHH
Confidence 9999999999985 699999999999988776543321 1111 12346788999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHh
Q 007627 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (595)
Q Consensus 212 ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~a 288 (595)
||++||+||+|||+.+|+++..+.++++ ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|++.+
T Consensus 157 AL~aGN~VVlKps~~~p~~~~~l~~~~~----~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 232 (468)
T cd07088 157 ALVTGNTIVIKPSEETPLNALEFAELVD----EAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAA 232 (468)
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHH----HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999988877755 6899999999999976 57788887 899999999999999999999
Q ss_pred hcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCC
Q 007627 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368 (595)
Q Consensus 289 a~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~ 368 (595)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 233 a~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 312 (468)
T cd07088 233 AENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAA 312 (468)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHH
Q 007627 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE 448 (595)
Q Consensus 369 ~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~ 448 (595)
+++||++++.++++++++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 389 (468)
T cd07088 313 TDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPE---GEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLD 389 (468)
T ss_pred CccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC---CCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHH
Confidence 9999999999999999999999999999999997421 1368999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 449 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 449 eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|||+++|+++|||++||||+|.++++++++++++|+|+||+...... ..||||+|.||+|+++|++|+++||+.|+|.
T Consensus 390 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~--~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 390 EAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAM--QGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCC--CCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999999999765432 3699999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-96 Score=796.64 Aligned_cols=462 Identities=29% Similarity=0.445 Sum_probs=421.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHh
Q 007627 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161 (595)
Q Consensus 82 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~ 161 (595)
.+..+|+++++++|++||+.|++++..+|.++|++++++|++|+++|++++++|+||+..++..+|+..+++.++|++++
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999998767999999999999999
Q ss_pred chhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 007627 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (595)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~ 241 (595)
++++..+.....+....+..+++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~- 160 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPK- 160 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH-
Confidence 8888765321111111234678999999999999999999999999999999999999999999999999998888764
Q ss_pred HHhcCCCCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcC---CCCHHHHH
Q 007627 242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD---DVDVPHVA 317 (595)
Q Consensus 242 l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~---daDl~~aa 317 (595)
++|+|++|+|+|+.++++.|+. .+|+|+||||+.+|+.|++.|+++++|+++|||||||+||++ |||++.|+
T Consensus 161 ----~lP~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa 236 (484)
T PLN02203 161 ----YLDSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAV 236 (484)
T ss_pred ----hCCcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHH
Confidence 4999999999997788999998 999999999999999999999999999999999999999997 69999999
Q ss_pred HHHHHHHHH-cCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCe
Q 007627 318 QIAVRAALQ-SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE 396 (595)
Q Consensus 318 ~~i~~~~f~-n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~ 396 (595)
+.+++++|. |+||.|++++|+|||++++|+|+++|+++++++++|+|.++ .++|||++++++++++++|++++++ ++
T Consensus 237 ~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~ 314 (484)
T PLN02203 237 NRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-AS 314 (484)
T ss_pred HHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-Ce
Confidence 999999996 89999999999999999999999999999999999999875 6899999999999999999999987 78
Q ss_pred EeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHH
Q 007627 397 ILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 476 (595)
Q Consensus 397 vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~ 476 (595)
+++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 315 ~~~gg~~-----~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 389 (484)
T PLN02203 315 IVHGGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389 (484)
T ss_pred EEeCCCc-----CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 9999872 23689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCcch-HHHH
Q 007627 477 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN-GFEF 555 (595)
Q Consensus 477 ~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~~~-~~~~ 555 (595)
++++++|+|+||++..+...+.+||||+|+||+|+++|++|+++||+.|+|+.++. .+..+++||++.. +.++
T Consensus 390 ~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~------~~~~~~~~~p~~~~~~~~ 463 (484)
T PLN02203 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSL------LTEFEFRYPPWNDFKLGF 463 (484)
T ss_pred HHhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCc------cCcccccCCCCChHHHHH
Confidence 99999999999998655444568999999999999999999999999999987753 2355678988654 6777
Q ss_pred HHHHHH
Q 007627 556 QESLVE 561 (595)
Q Consensus 556 ~~~~~~ 561 (595)
++.+++
T Consensus 464 ~~~~~~ 469 (484)
T PLN02203 464 LRLVYR 469 (484)
T ss_pred HHHHHh
Confidence 777766
|
|
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-95 Score=797.30 Aligned_cols=451 Identities=38% Similarity=0.633 Sum_probs=424.6
Q ss_pred ecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHH
Q 007627 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (595)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei 148 (595)
+||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++++++|++++++|+||+..++ ..|+
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~-~~ev 79 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADA-GLEV 79 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHH
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999877 5699
Q ss_pred HhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCch
Q 007627 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (595)
Q Consensus 149 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p 228 (595)
..+++.++++++.+.+++..+..+......+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p 159 (453)
T cd07099 80 LLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTP 159 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 99999999999998887765443332212355778999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEE
Q 007627 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307 (595)
Q Consensus 229 ~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV 307 (595)
+++.++.+++. ++|+|+|++|+|+|+++.++.|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||
T Consensus 160 ~~~~~l~~~l~----~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV 235 (453)
T cd07099 160 LVGELLAEAWA----AAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIV 235 (453)
T ss_pred HHHHHHHHHHH----HcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEE
Confidence 99988777655 689999999999997788899998 8999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHH
Q 007627 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387 (595)
Q Consensus 308 ~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i 387 (595)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+|++.+++++++++
T Consensus 236 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i 315 (453)
T cd07099 236 LADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHV 315 (453)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEec
Q 007627 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467 (595)
Q Consensus 388 ~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft 467 (595)
++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||
T Consensus 316 ~~a~~~ga~~~~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 391 (453)
T cd07099 316 DDAVAKGAKALTGGARS----NGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFS 391 (453)
T ss_pred HHHHhCCCEEEeCCCcC----CCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEc
Confidence 99999999999999742 14689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 468 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 468 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+|.++++++++++++|+|+||+...+...+.+||||+|.||+|++||++|+++||+.|+++
T Consensus 392 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 392 RDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred CCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 9999999999999999999999876665667999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-95 Score=796.99 Aligned_cols=452 Identities=31% Similarity=0.496 Sum_probs=418.9
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhH
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~E 147 (595)
++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+|+++|++++++|+||+..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 79 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-WD 79 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999985 59
Q ss_pred HHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCc
Q 007627 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (595)
Q Consensus 148 i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~ 227 (595)
+..+++.++|+++.++++.............+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~ 159 (456)
T cd07110 80 VDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELT 159 (456)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccc
Confidence 99999999999998887642111111111124567899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcce
Q 007627 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304 (595)
Q Consensus 228 p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p 304 (595)
|+++..+.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|+++++++++|+++|||||||
T Consensus 160 p~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~ 235 (456)
T cd07110 160 SLTELELAEIAA----EAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSP 235 (456)
T ss_pred hHHHHHHHHHHH----HcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCe
Confidence 999998888765 6899999999999965 57888987 8999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHH
Q 007627 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384 (595)
Q Consensus 305 ~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~ 384 (595)
+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++++++
T Consensus 236 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~ 315 (456)
T cd07110 236 IIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVL 315 (456)
T ss_pred eEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeE
Q 007627 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464 (595)
Q Consensus 385 ~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~as 464 (595)
+++++++++||++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++|
T Consensus 316 ~~v~~a~~~Ga~~~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~ 393 (456)
T cd07110 316 SFIARGKEEGARLLCGGRRPAH--LEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAA 393 (456)
T ss_pred HHHHHHHhCCCEEEeCCCcccc--cCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEE
Confidence 9999999999999999974321 14688999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 465 Vft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|||+|.+.++++++++++|+|+||+.... .+.+||||+|+||+|+++|++|+++||+.|+++
T Consensus 394 v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 394 VISRDAERCDRVAEALEAGIVWINCSQPC--FPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred EECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999999986432 345899999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-95 Score=802.17 Aligned_cols=470 Identities=23% Similarity=0.370 Sum_probs=434.0
Q ss_pred CCcccccCCcccCCCCCCeEEeecCC-CCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
....+||+|+|+.+ +.+++++||. ||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+++
T Consensus 17 ~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (500)
T cd07083 17 RAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRR 94 (500)
T ss_pred ccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCH
Confidence 34567999999874 5679999997 69999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..++ ..|+..+++.++++++.++++......... ..+..+++.++|+|||++|+|||||+.+.
T Consensus 95 ~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~ 171 (500)
T cd07083 95 RELIATLTYEVGKNWVEA-IDDVAEAIDFIRYYARAALRLRYPAVEVVP--YPGEDNESFYVGLGAGVVISPWNFPVAIF 171 (500)
T ss_pred HHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCC--CCCceEEEEEeccceEEEEcCCccHHHHH
Confidence 999999999999999997 579999999999999998877654321111 12446788999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++..+.+++. ++|+|+|+||+|+|++ +.++.|++ ++|+|+||||+.+|+
T Consensus 172 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~ 247 (500)
T cd07083 172 TGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFH----EAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGK 247 (500)
T ss_pred HHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHH----HcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHH
Confidence 9999999999999999999999999998888765 6899999999999964 77888987 999999999999999
Q ss_pred HHHHHhhcCC------CcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHH
Q 007627 283 MIMRNASKTL------TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356 (595)
Q Consensus 283 ~v~~~aa~~l------~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~ 356 (595)
.|++.+++++ +|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 248 ~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 327 (500)
T cd07083 248 KIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRA 327 (500)
T ss_pred HHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHH
Confidence 9999999987 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCccccccccc
Q 007627 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 436 (595)
Q Consensus 357 ~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FG 436 (595)
+++++|+|.++++++||++++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||
T Consensus 328 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 402 (500)
T cd07083 328 ERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRL----EGEGYFVAPTVVEEVPPKARIAQEEIFG 402 (500)
T ss_pred HcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcC----CCCCeEEccEEEeCCCCCChHhhCCCCC
Confidence 99999999999999999999999999999999999887 899999742 2358999999999999999999999999
Q ss_pred CceeEEeeC--CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCC
Q 007627 437 PIMPIMKFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFA 513 (595)
Q Consensus 437 PVl~v~~~~--~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~ 513 (595)
||++|++|+ |+||||+++|+++|||++||||+|.+.+.++++++++|+|+||+...+...+.+||||+|.||+| +++
T Consensus 403 Pvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 482 (500)
T cd07083 403 PVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482 (500)
T ss_pred ceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCccc
Confidence 999999999 99999999999999999999999999999999999999999999866655456899999999999 688
Q ss_pred cHHHHhccceeeEEEEc
Q 007627 514 GVEGLRACCLVKSVVED 530 (595)
Q Consensus 514 G~~gl~~~t~~k~v~~~ 530 (595)
|++++++||+.|++..+
T Consensus 483 g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 483 GPHYLRRFLEMKAVAER 499 (500)
T ss_pred CHHHHHHhhheeEEEEc
Confidence 99999999999998753
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-95 Score=795.76 Aligned_cols=448 Identities=23% Similarity=0.343 Sum_probs=416.3
Q ss_pred EeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh
Q 007627 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (595)
Q Consensus 67 ~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~-W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~ 145 (595)
+++||+||+++++++.++.+|+++++++|++||+. |+.+|.++|.++|++++++|++++++|++++++|+||+..++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 80 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK- 80 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence 57899999999999999999999999999999998 5679999999999999999999999999999999999999985
Q ss_pred hHHHhHHHHHHHHHHhchhhcCcccccCCc--ccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEec
Q 007627 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (595)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKp 223 (595)
.|+..+++.+++++++++++..... +... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 81 ~ev~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKp 159 (455)
T cd07148 81 VEVTRAIDGVELAADELGQLGGREI-PMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKP 159 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccc-ccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeC
Confidence 6999999999999999887654321 1111 012345688999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCC
Q 007627 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (595)
Q Consensus 224 s~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGG 301 (595)
|+.+|+++..+.++++ ++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+++|+.|+++++. .+|+++||||
T Consensus 160 s~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG 234 (455)
T cd07148 160 ALATPLSCLAFVDLLH----EAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGG 234 (455)
T ss_pred CCcccHHHHHHHHHHH----HcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCC
Confidence 9999999998888765 589999999999998788899987 99999999999999999999886 4999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHH
Q 007627 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (595)
Q Consensus 302 k~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~ 381 (595)
|||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus 235 ~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 314 (455)
T cd07148 235 AAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVD 314 (455)
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCc
Q 007627 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (595)
Q Consensus 382 ~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL 461 (595)
+++++|++|+++|+++++||.. ..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 315 ~~~~~i~~a~~~Ga~vl~gg~~------~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL 388 (455)
T cd07148 315 RVEEWVNEAVAAGARLLCGGKR------LSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAF 388 (455)
T ss_pred HHHHHHHHHHhCCCEEEeCCcc------CCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCc
Confidence 9999999999999999999973 2478999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 462 ~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
++||||+|.+++.++++++++|+|+||+...+. ...+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 389 ~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 389 QAAVFTKDLDVALKAVRRLDATAVMVNDHTAFR-VDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred eEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCC-CCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence 999999999999999999999999999975433 335899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-95 Score=796.12 Aligned_cols=450 Identities=33% Similarity=0.530 Sum_probs=417.2
Q ss_pred EEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh
Q 007627 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (595)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~ 145 (595)
++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+..++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 79 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSR- 79 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence 3678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hHHHhHHHHHHHHHHhchhhcCcccccCCc--ccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEec
Q 007627 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (595)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKp 223 (595)
.|+..+++.++++++..+. +..+..+... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 80 ~ev~~~~~~l~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kp 158 (456)
T cd07145 80 VEVERTIRLFKLAAEEAKV-LRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKP 158 (456)
T ss_pred HHHHHHHHHHHHHHHHHHH-hcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 5999999999999987664 3332222110 011234678899999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCC
Q 007627 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (595)
Q Consensus 224 s~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElG 300 (595)
|+.+|+++..+.++++ ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|++.++++++|+++|||
T Consensus 159 s~~~p~~~~~l~~~~~----~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElg 234 (456)
T cd07145 159 SSNTPLTAIELAKILE----EAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELG 234 (456)
T ss_pred CccchHHHHHHHHHHH----HcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecC
Confidence 9999999988877765 5799999999999965 67888987 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHH
Q 007627 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (595)
Q Consensus 301 Gk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~ 380 (595)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 235 G~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (456)
T cd07145 235 GSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAV 314 (456)
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCC
Q 007627 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (595)
Q Consensus 381 ~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~g 460 (595)
++++++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 315 ~~~~~~i~~a~~~ga~vl~gg~~------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 388 (456)
T cd07145 315 ERMENLVNDAVEKGGKILYGGKR------DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYG 388 (456)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCC------CCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCC
Confidence 99999999999999999999973 238999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 461 L~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|++||||+|.+++.++++++++|+|+||+.... ....+||||+|+||+|+++|++||++||+.|+|.
T Consensus 389 L~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 389 LQASVFTNDINRALKVARELEAGGVVINDSTRF-RWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence 999999999999999999999999999987643 2345899999999999999999999999999985
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-95 Score=794.29 Aligned_cols=452 Identities=32% Similarity=0.491 Sum_probs=419.5
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhH
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~E 147 (595)
++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|.+++++|++++++|+||+..++ ..|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~e 79 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEA-RVD 79 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999888 469
Q ss_pred HHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCc
Q 007627 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (595)
Q Consensus 148 i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~ 227 (595)
+..+++.++|+++..++. ..+..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~ 155 (457)
T cd07090 80 IDSSADCLEYYAGLAPTL-SGEHVPLP---GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFT 155 (457)
T ss_pred HHHHHHHHHHHHHHHHHh-CCeeeccC---CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcC
Confidence 999999999999887653 22222211 23467889999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceE
Q 007627 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305 (595)
Q Consensus 228 p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~ 305 (595)
|+++..+.+++. ++|+|+|++|+|+|+.+.++.|+. ++|+|+||||+.+|+.|+++++++++|+++|||||||+
T Consensus 156 ~~~~~~l~~~~~----~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~ 231 (457)
T cd07090 156 PLTALLLAEILT----EAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPL 231 (457)
T ss_pred cHHHHHHHHHHH----HcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCce
Confidence 999998887765 689999999999998788888887 79999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHH
Q 007627 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385 (595)
Q Consensus 306 IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~ 385 (595)
||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++++
T Consensus 232 iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 311 (457)
T cd07090 232 IIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLG 311 (457)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEeecCCCCCCC-CCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeE
Q 007627 386 LVNDALDKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464 (595)
Q Consensus 386 ~i~~a~~~Ga~vl~gG~~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~as 464 (595)
+|++++++|+++++||.....+ ....|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++|
T Consensus 312 ~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~ 391 (457)
T cd07090 312 YIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAG 391 (457)
T ss_pred HHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEE
Confidence 9999999999999999753211 123689999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEc
Q 007627 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 465 Vft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~ 530 (595)
|||+|.+.++++++++++|+|+||++... ...+||||+|.||+|+++|++|+++||+.|+++.+
T Consensus 392 i~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 392 VFTRDLQRAHRVIAQLQAGTCWINTYNIS--PVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred EEcCCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 99999999999999999999999986443 34589999999999999999999999999999753
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-95 Score=793.82 Aligned_cols=460 Identities=24% Similarity=0.405 Sum_probs=420.7
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
-+||+|+|..+ +.+++++||+||+++++++.++.+|+++++++|++|+ +.++..+|.++|++++++|++++++|+
T Consensus 5 ~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela 79 (472)
T TIGR03250 5 ALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS 79 (472)
T ss_pred CceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 47899999863 5789999999999999999999999999999998876 578999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCc--ccccccceEEEecc-eEEEEEcCcchhhHhhH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~Pl-GVV~~I~p~N~P~~~~~ 206 (595)
+++++|+||+..++. .|+..+++.++|+++.+.+..... .+... .......++.++|+ |||++|+|||||+.+++
T Consensus 80 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~ 157 (472)
T TIGR03250 80 DLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQI-FSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVA 157 (472)
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHH
Confidence 999999999999985 699999999999998876643211 11110 01123567899998 99999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.
T Consensus 158 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~ 233 (472)
T TIGR03250 158 HKIAPAIATNNRMVVKPSEKTPLSALYLADILY----EAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKY 233 (472)
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 999999999999999999999999988877655 6899999999999965 67899987 9999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 234 i~~~a~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~ 311 (472)
T TIGR03250 234 IAARAG--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGD 311 (472)
T ss_pred HHHHhc--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCC
Confidence 999886 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
|.++++++|||+++++++++++++++++++|+++++||. ..|+|++|||+++++++|++++||+||||++|++
T Consensus 312 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~-------~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~ 384 (472)
T TIGR03250 312 PMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNV-------RDGALYAPTVLDRVDPSMTLVREETFGPVSPVIR 384 (472)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC-------cCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEE
Confidence 999999999999999999999999999999999999987 2589999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccc
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACC 522 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t 522 (595)
|+|.||||+++|+++|||++||||+|.+++.++++++++|+|+||+...+. .+.+||||+|+||+| +.+|++||++||
T Consensus 385 ~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~l~~ft 463 (472)
T TIGR03250 385 FCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYR-LELTPFGGIKDSGLGYKEGVQEAMKSFT 463 (472)
T ss_pred eCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCC-CCCCCCCccccccCCCCCChHHHHHHhh
Confidence 999999999999999999999999999999999999999999999876443 334899999999999 566789999999
Q ss_pred eeeEEEEc
Q 007627 523 LVKSVVED 530 (595)
Q Consensus 523 ~~k~v~~~ 530 (595)
+.|+++..
T Consensus 464 ~~k~i~~~ 471 (472)
T TIGR03250 464 NLKTYSLP 471 (472)
T ss_pred ceEEEEEe
Confidence 99998653
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-95 Score=795.88 Aligned_cols=464 Identities=24% Similarity=0.399 Sum_probs=425.3
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 007627 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (595)
Q Consensus 51 ~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~ 130 (595)
+||+|+|+.+ ++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 5789999865 467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHH
Q 007627 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (595)
Q Consensus 131 ~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~ 210 (595)
++++|+||+..++. .|+..+++.+++++.+..++....... ..+...++.++|+|||++|+|||||+.+++++++
T Consensus 80 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~ 154 (484)
T TIGR03240 80 VIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENP----MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIV 154 (484)
T ss_pred HHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccC----CCCceeEEEEecccEEEEECCCchHHHHHHHHHH
Confidence 99999999999985 799999999999888776653321111 1233567899999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHh
Q 007627 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (595)
Q Consensus 211 ~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~a 288 (595)
+||++||+||+|||+.+|+++..+.++++ ++|+|+|+||+|+|+.+.++.|++ ++|+|+||||+++|+.|++.+
T Consensus 155 ~ALaaGN~VVlKPs~~tp~t~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~a 230 (484)
T TIGR03240 155 PALLAGNTVVFKPSELTPWVAEETVKLWE----KAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQF 230 (484)
T ss_pred HHHHcCCEEEEECCccccHHHHHHHHHHH----HhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999998888765 689999999999997788888987 899999999999999999998
Q ss_pred hcC-CCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchH-HHHHHHHHHHHHhccCCCC-C
Q 007627 289 SKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPP-L 365 (595)
Q Consensus 289 a~~-l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~-~ 365 (595)
+++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.++++++++|++ .
T Consensus 231 a~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~ 310 (484)
T TIGR03240 231 AGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDA 310 (484)
T ss_pred hhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCc
Confidence 765 688999999999999999999999999999999999999999999999999985 9999999999999999997 4
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++|||++.++++++++++++++++|+++++||... +..|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 311 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~ 385 (484)
T TIGR03240 311 EPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQL----DPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYD 385 (484)
T ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeC
Confidence 677899999999999999999999999999999988632 235789999999 699999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+. ...+||||+|.||+|+++|.++++ ||+.|
T Consensus 386 ~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~-~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~ 463 (484)
T TIGR03240 386 DFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGA-SSAAPFGGIGASGNHRPSAYYAAD-YCAYP 463 (484)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCC-CCCCCcCCcccccCCCCCchHHHh-heeee
Confidence 9999999999999999999999999999999999999999999876553 345899999999999999977766 99999
Q ss_pred EEEEcc
Q 007627 526 SVVEDR 531 (595)
Q Consensus 526 ~v~~~~ 531 (595)
++..+.
T Consensus 464 ~~~~~~ 469 (484)
T TIGR03240 464 VASLEA 469 (484)
T ss_pred EEEEec
Confidence 998874
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-95 Score=791.88 Aligned_cols=449 Identities=29% Similarity=0.423 Sum_probs=416.0
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~--W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~ 145 (595)
++||+||+++++++.++.+|+++|++.|++||+. |+. +..+|.++|++++++|++|+++|++++++|+||+..++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~- 78 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR- 78 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence 4799999999999999999999999999999985 998 999999999999999999999999999999999999985
Q ss_pred hHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCC
Q 007627 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225 (595)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 225 (595)
+|+..+++.++|+++.+++..... .+. ..+...++.|+|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 79 ~Ev~~~i~~l~~~~~~~~~~~g~~-~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 154 (455)
T cd07120 79 FEISGAISELRYYAGLARTEAGRM-IEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG 154 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcc-ccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCC
Confidence 699999999999998877653221 111 1234578999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCc
Q 007627 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (595)
Q Consensus 226 ~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk 302 (595)
.+|+++..+.++++++ +|+|+|++|+|+|++ +.++.|++ ++|.|+||||+.+|+.|++.++++++|+++|||||
T Consensus 155 ~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~ 231 (455)
T cd07120 155 QTAQINAAIIRILAEI---PSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGK 231 (455)
T ss_pred CChHHHHHHHHHHHHh---cCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCC
Confidence 9999999888876532 699999999999865 67888987 89999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHH
Q 007627 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (595)
Q Consensus 303 ~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~ 382 (595)
||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++++
T Consensus 232 ~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~ 311 (455)
T cd07120 232 TPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDR 311 (455)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCce
Q 007627 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (595)
Q Consensus 383 ~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~ 462 (595)
++++|++++++|+++++||.....+ ...|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 312 ~~~~i~~a~~~ga~~~~~g~~~~~~-~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs 390 (455)
T cd07120 312 VDRMVERAIAAGAEVVLRGGPVTEG-LAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLA 390 (455)
T ss_pred HHHHHHHHHHCCCEEEeCCccCccc-CCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCce
Confidence 9999999999999999988643211 236899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 463 asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+||||+|.+.++++++++++|+|+||++.... +.+||||+|+||+|++||++|+++||+.|+|+
T Consensus 391 ~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 391 ASVWTRDLARAMRVARAIRAGTVWINDWNKLF--AEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred EEEEcCCHHHHHHHHHhcCcceEEECCCCCCC--CCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999986543 35899999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-95 Score=792.50 Aligned_cols=453 Identities=31% Similarity=0.474 Sum_probs=421.0
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhh
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA-KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~-~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~ 146 (595)
++||+||+++++++.++.+|+++++++|++||+.|+ ++|..+|.++|++++++|++++++|++++++|+||+..++...
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 9999999999999999999999999999999999999887667
Q ss_pred HHHhHHHHHHHHHHhchhhcCcccccCC-cccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCC
Q 007627 147 EIMTTCEKITWLLSEGEKWLKPEYRSSG-RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225 (595)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 225 (595)
|+..+++.++|++++++++..+...+.. ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999998887554432221 111245678999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCc
Q 007627 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (595)
Q Consensus 226 ~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk 302 (595)
.+|.++..+.+++. ++|+|+|++|+|+|++ +.+..|++ ++|.|+||||+.+|+.|++.++++++|+++|||||
T Consensus 161 ~~p~~~~~l~~~~~----~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~ 236 (459)
T cd07089 161 DTPLSALLLGEIIA----ETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGK 236 (459)
T ss_pred CChHHHHHHHHHHH----HcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCC
Confidence 99999988877765 5899999999999976 46888887 89999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHH
Q 007627 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (595)
Q Consensus 303 ~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~ 382 (595)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 237 n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~ 316 (459)
T cd07089 237 SANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDR 316 (459)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCce
Q 007627 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (595)
Q Consensus 383 ~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~ 462 (595)
+++++++++++|+++++||..... .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 317 v~~~i~~a~~~Ga~~l~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~ 394 (459)
T cd07089 317 VEGYIARGRDEGARLVTGGGRPAG--LDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLS 394 (459)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCe
Confidence 999999999999999999974211 236899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 463 asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+||||+|.++++++++++++|+|+||+... ..+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 395 ~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 395 GGVWSADVDRAYRVARRIRTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred EEEEcCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 999999999999999999999999998753 2345899999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-94 Score=787.91 Aligned_cols=443 Identities=33% Similarity=0.504 Sum_probs=414.3
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhH
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~E 147 (595)
++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|.+|+++|++++++|+||+..++. .|
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e 79 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-FE 79 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999885 59
Q ss_pred HHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCc
Q 007627 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (595)
Q Consensus 148 i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~ 227 (595)
+..+++.++++++.... .+.... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~~~~~~~---~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~ 153 (446)
T cd07106 80 VGGAVAWLRYTASLDLP---DEVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFT 153 (446)
T ss_pred HHHHHHHHHHHHhhhhc---CccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 99999999998876521 111111 123467899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceE
Q 007627 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305 (595)
Q Consensus 228 p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~ 305 (595)
|+++.++.+++++ ++|+|++|+++|+.+.++.|++ ++|.|+||||+.+|+.|+++++++++|+++|||||||+
T Consensus 154 p~~~~~l~~~~~~-----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~ 228 (446)
T cd07106 154 PLCTLKLGELAQE-----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAA 228 (446)
T ss_pred hHHHHHHHHHHHH-----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCee
Confidence 9999999988875 3999999999997788888987 79999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHH
Q 007627 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385 (595)
Q Consensus 306 IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~ 385 (595)
||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++
T Consensus 229 iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~ 308 (446)
T cd07106 229 IVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKE 308 (446)
T ss_pred EECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEE
Q 007627 386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465 (595)
Q Consensus 386 ~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asV 465 (595)
++++++.+|+++++||... ...|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 309 ~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i 384 (446)
T cd07106 309 LVEDAKAKGAKVLAGGEPL----DGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASV 384 (446)
T ss_pred HHHHHHHCCCEEEeCCCcC----CCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEE
Confidence 9999999999999999742 236899999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 466 ft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
||+|.++++++++++++|+|+||++... .+.+||||+|.||+|++||++|+++||+.|+|+
T Consensus 385 ~t~d~~~~~~~~~~~~~G~v~iN~~~~~--~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 385 WSSDLERAEAVARRLEAGTVWINTHGAL--DPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred ECCCHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 9999999999999999999999997643 345899999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-95 Score=815.08 Aligned_cols=467 Identities=21% Similarity=0.279 Sum_probs=418.1
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A-~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
++||+|+|+.+. +.+++++||+||+++++++.++ +|+++|+++|++| |+.|+++|..+|.++|++++++|++|+++|
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 79 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEAL 79 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999998764 5689999999999999999999 6999999999996 999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcc-------cccCCcccccccceEEEecc-eEEEEEcCcch
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE-------YRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNY 200 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~v~~~Pl-GVV~~I~p~N~ 200 (595)
++ +++|+||+..++. .|+..+++.++|+++.+++++.+. ..+.. .......++.|+|+ |||++|+||||
T Consensus 80 a~-~~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~P~~Gvv~~I~pwN~ 156 (663)
T TIGR02278 80 YA-LAATTGATRRDNW-VDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS-KDGSFQGRHILTPKGGVAVQINAFNF 156 (663)
T ss_pred HH-HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhhhhhccccccccCCceeccC-CCCccceEEEEEeCCceEEEEcCCch
Confidence 99 5999999999985 699999999999999887644221 11110 00012467999998 99999999999
Q ss_pred hhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEeeeCCh-hHHHHHHhCCCEEEEeCCh
Q 007627 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSP 278 (595)
Q Consensus 201 P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aG-lp~g~v~vv~g~~-~~~~~L~~~vd~I~ftGS~ 278 (595)
|+.++++++++||++||+||+|||+.+|+++.++.+++. ++| +|+|++|+|+|+. +.... ...+|+|+||||+
T Consensus 157 P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~----~aG~lP~gv~~~v~g~~~~~~~~-~~~~~~V~FTGS~ 231 (663)
T TIGR02278 157 PVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMV----ESGLLPEGSLQLICGSAGDLLDH-LDHRDVVAFTGSA 231 (663)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCCCCCCcEEEEeCChHHHHhc-CCCCCEEEEECCH
Confidence 999999999999999999999999999999998888765 689 9999999999853 22221 1278999999999
Q ss_pred hHHHHHHHHh--hcCCCcEeecCCCcceEEEcCCCC-----HHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHH
Q 007627 279 GVGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351 (595)
Q Consensus 279 ~~g~~v~~~a--a~~l~pv~lElGGk~p~IV~~daD-----l~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~ 351 (595)
++|++|++.+ +++++|+++|||||||+||++||| ++.|++.+++|+|.|+||.|++++|||||+++||+|+++
T Consensus 232 ~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~ 311 (663)
T TIGR02278 232 ATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKA 311 (663)
T ss_pred HHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHH
Confidence 9999999974 489999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCC-ccc
Q 007627 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM-KLM 430 (595)
Q Consensus 352 L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~-~i~ 430 (595)
|+++++++++|+|.++++++||||++.++++++++|++|+++|+++++||.. ..+|+|++|||+.+++++| +++
T Consensus 312 l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~-----~~~g~~~~PTvl~~~~~~~~~i~ 386 (663)
T TIGR02278 312 LQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPG-----RLDGAFFPPTLLLAEDPWAGAVH 386 (663)
T ss_pred HHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-----CCCCeeEccEEEeeCCcchhhHH
Confidence 9999999999999999999999999999999999999999999999999973 2358999999999999886 799
Q ss_pred ccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh--ccCCeee-cCCC------cccccCCCCC
Q 007627 431 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAI-NDFA------SNYMCQSLPF 501 (595)
Q Consensus 431 ~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l--~~G~v~I-N~~~------~~~~~~~~Pf 501 (595)
+||+||||++|++|+|.||||+++|+++|||++||||+|.+.+++++++| ++|+|+| |+.. .....+.+||
T Consensus 387 ~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pf 466 (663)
T TIGR02278 387 ATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLH 466 (663)
T ss_pred hccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 8999999 6411 1112345899
Q ss_pred CCcCCCCCCCC-CcHHHHhccceeeEEEEcc
Q 007627 502 GGVKDSGFGRF-AGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 502 GG~~~SG~G~~-~G~~gl~~~t~~k~v~~~~ 531 (595)
||+|+||+|++ +|.+++++||+.|+|..-+
T Consensus 467 GG~k~SG~G~~~g~~~~l~~f~~~k~v~~~~ 497 (663)
T TIGR02278 467 GGPGRAGGGEELGGLRSVKHYMQRTAIQGSP 497 (663)
T ss_pred CCCccCcCCCccchHHHHHHhceeEEEEcCH
Confidence 99999999999 5689999999999997654
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-94 Score=789.41 Aligned_cols=447 Identities=29% Similarity=0.436 Sum_probs=417.5
Q ss_pred EEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh
Q 007627 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (595)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~ 145 (595)
++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++++++|++++++|+|||..++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 79 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAW- 79 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999999999884
Q ss_pred hHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCC
Q 007627 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225 (595)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 225 (595)
.|+..+++.+++++...++.... ..+.. ..+..++++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 80 ~ev~~~~~~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~ 156 (451)
T cd07150 80 FETTFTPELLRAAAGECRRVRGE-TLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSE 156 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCc
Confidence 59999999999998887664321 11111 1234678999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCc
Q 007627 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (595)
Q Consensus 226 ~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk 302 (595)
.+|+++..+.+++ .++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+.+|+.|++.++++++|+++|||||
T Consensus 157 ~~p~t~~~l~~~~----~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~ 232 (451)
T cd07150 157 ETPVIGLKIAEIM----EEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGK 232 (451)
T ss_pred cCcHHHHHHHHHH----HHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCC
Confidence 9999998887765 46899999999999964 67888886 99999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHH
Q 007627 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (595)
Q Consensus 303 ~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~ 382 (595)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 233 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 312 (451)
T cd07150 233 NPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVER 312 (451)
T ss_pred CeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCce
Q 007627 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (595)
Q Consensus 383 ~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~ 462 (595)
+++++++++++|+++++||. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 313 v~~~i~~a~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 385 (451)
T cd07150 313 IKRQVEDAVAKGAKLLTGGK-------YDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLS 385 (451)
T ss_pred HHHHHHHHHhCCCEEEeCCc-------cCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCe
Confidence 99999999999999999986 25889999999999999999999999999999999999999999999999999
Q ss_pred eEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 463 asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+||||+|.++++++++++++|+|+||+...+. .+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 386 a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 386 AAILTNDLQRAFKLAERLESGMVHINDPTILD-EAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred EEEEeCCHHHHHHHHHhcCcCEEEECCCCCCC-CCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 99999999999999999999999999986553 345899999999999999999999999999985
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-94 Score=788.31 Aligned_cols=449 Identities=31% Similarity=0.505 Sum_probs=416.2
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhh
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA-KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~-~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~ 146 (595)
++||+||+++++++.++.+|+++++++|++||+.|. ++|.++|.++|+++++.|.+|+++|++++++|+||+..++. .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 79 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR-A 79 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-H
Confidence 479999999999999999999999999999999977 99999999999999999999999999999999999999985 6
Q ss_pred HHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCC
Q 007627 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226 (595)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~ 226 (595)
|+..+++.++|+++..+++... ..+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 80 ev~~~~~~l~~~~~~~~~~~g~-~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~ 155 (454)
T cd07109 80 DVEAAARYFEYYGGAADKLHGE-TIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAED 155 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCc-cccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 9999999999999887765432 1111 12346789999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcc
Q 007627 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303 (595)
Q Consensus 227 ~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~ 303 (595)
+|+++..+.+++ .++|+|+|++|+|+|. .+.++.|++ ++|.|+||||+.+|+.|++.++++++|+++||||||
T Consensus 156 ~p~~~~~l~~~~----~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~ 231 (454)
T cd07109 156 APLTALRLAELA----EEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKS 231 (454)
T ss_pred ChHHHHHHHHHH----HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCC
Confidence 999999888765 4689999999999995 478899998 799999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHH
Q 007627 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383 (595)
Q Consensus 304 p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~ 383 (595)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++
T Consensus 232 ~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~ 310 (454)
T cd07109 232 PQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRV 310 (454)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999975 6899999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCcee
Q 007627 384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463 (595)
Q Consensus 384 ~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~a 463 (595)
+++|++++++|+++++||.....+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 311 ~~~i~~a~~~ga~~l~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~ 389 (454)
T cd07109 311 EGFVARARARGARIVAGGRIAEGA-PAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVA 389 (454)
T ss_pred HHHHHHHHhCCCEEEeCCCcCccc-CCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceE
Confidence 999999999999999998743222 2468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 464 sVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
||||+|.+.++++++++++|+|+||++..+.. ..+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 390 ~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~-~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 390 GVWTRDGDRALRVARRLRAGQVFVNNYGAGGG-IELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred EEECCCHHHHHHHHHhcCcCeEEECCCCCCCC-CCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999764443 45899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-94 Score=795.06 Aligned_cols=466 Identities=22% Similarity=0.357 Sum_probs=430.1
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..-||+|+|+ .++.+++++||+| |+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|.+++++
T Consensus 33 ~~p~i~g~~~--~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (518)
T cd07125 33 AIPIINGEET--ETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGE 110 (518)
T ss_pred cCceECCEEe--eCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3458899997 3578899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. .|+..+++.+++++++++++++....+.+ .+...+++++|+|||++|+|||||+.+.++
T Consensus 111 la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~ 186 (518)
T cd07125 111 LIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSDPELPGP---TGELNGLELHGRGVFVCISPWNFPLAIFTG 186 (518)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCC---CCceeEEEEecccEEEEECCcchHHHHHHH
Confidence 99999999999999985 69999999999999998887754432222 245678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChh-HHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~-~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|+++ .++.|++ ++|+|+||||+.+|+.|
T Consensus 187 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i 262 (518)
T cd07125 187 QIAAALAAGNTVIAKPAEQTPLIAARAVELLH----EAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLI 262 (518)
T ss_pred HHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHH----HcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999988887755 68999999999999764 7888887 89999999999999999
Q ss_pred HHHhhcC---CCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 285 MRNASKT---LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 285 ~~~aa~~---l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
++.++++ ++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 263 ~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 342 (518)
T cd07125 263 NRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKV 342 (518)
T ss_pred HHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCc
Confidence 9998855 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++||++++.++++++++++++++ ++++++||... ...|+|++|||+.++ +|++++||+||||++|
T Consensus 343 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~----~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v 415 (518)
T cd07125 343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLD----DGNGYFVAPGIIEIV--GIFDLTTEVFGPILHV 415 (518)
T ss_pred cCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcC----CCCCeEEccEEEeec--CChHhhCcccCCeEEE
Confidence 9999999999999999999999999999987 46899998631 126899999999988 9999999999999999
Q ss_pred EeeC--CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCC-CCcHHHH
Q 007627 442 MKFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGL 518 (595)
Q Consensus 442 ~~~~--~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~G~~gl 518 (595)
++|+ |+||||+++|+++|||++||||+|.+.++++++++++|+|+||+...+...+.+||||+|.||+|+ .+|++|+
T Consensus 416 ~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~ 495 (518)
T cd07125 416 IRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYL 495 (518)
T ss_pred EEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHH
Confidence 9999 999999999999999999999999999999999999999999998665444558999999999995 6789999
Q ss_pred hccceeeEEEEcc
Q 007627 519 RACCLVKSVVEDR 531 (595)
Q Consensus 519 ~~~t~~k~v~~~~ 531 (595)
++||+.|+++.+.
T Consensus 496 ~~ft~~k~i~~~~ 508 (518)
T cd07125 496 LRFGNEKTVSLNT 508 (518)
T ss_pred HHhcceEEEEEEc
Confidence 9999999998754
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-94 Score=786.95 Aligned_cols=453 Identities=30% Similarity=0.486 Sum_probs=421.0
Q ss_pred CeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChh
Q 007627 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (595)
Q Consensus 64 ~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ 141 (595)
.+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|.+|+++|++++++|+||+..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4689999999999999999999999999999999998 49999999999999999999999999999999999999999
Q ss_pred hhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEE
Q 007627 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (595)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVl 221 (595)
++...|+..+++.++|+++.++++.... .+.. .+...++.++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~ 157 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEV-APTG---PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVL 157 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCce-ecCC---CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeee
Confidence 9865699999999999999988765431 1211 23457789999999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhh-cCCCcEee
Q 007627 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTL 297 (595)
Q Consensus 222 Kps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa-~~l~pv~l 297 (595)
|||+.+|+++..+.+++ .++|+|+|++|+|+|++ +.++.|+. ++|.|+||||+.+|+.|++.++ +++||+++
T Consensus 158 Kps~~~p~~~~~l~~~~----~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l 233 (462)
T cd07112 158 KPAEQSPLTALRLAELA----LEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233 (462)
T ss_pred eCCCCCCHHHHHHHHHH----HhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEe
Confidence 99999999999887765 46899999999999965 67888886 9999999999999999999998 58999999
Q ss_pred cCCCcceEEEcCCC-CHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccC
Q 007627 298 ELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 376 (595)
Q Consensus 298 ElGGk~p~IV~~da-Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~ 376 (595)
|||||||+||++|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++
T Consensus 234 elgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~ 313 (462)
T cd07112 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVS 313 (462)
T ss_pred cCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcC
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhc
Q 007627 377 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456 (595)
Q Consensus 377 ~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~ 456 (595)
+.++++++++|++|+++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+
T Consensus 314 ~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~ 391 (462)
T cd07112 314 EAHFDKVLGYIESGKAEGARLVAGGKRVLT--ETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALAND 391 (462)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhC
Confidence 999999999999999999999999974211 235889999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 457 ~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
++|||++||||+|.+.+.++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++||+.|++.
T Consensus 392 ~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 392 SVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEG--DITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred CCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 9999999999999999999999999999999986543 345899999999999999999999999999984
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-94 Score=786.04 Aligned_cols=447 Identities=28% Similarity=0.451 Sum_probs=416.0
Q ss_pred EEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh
Q 007627 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (595)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~ 145 (595)
++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|++++++|.++.++|++++++|+||+..++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~- 79 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR- 79 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hHHHhHHHHHHHHHHhchhhcCcccccCCcc--cccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEec
Q 007627 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (595)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKp 223 (595)
.|+..+++.+++++++++++... ..+.... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 80 ~ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp 158 (453)
T cd07094 80 VEVDRAIDTLRLAAEEAERIRGE-EIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP 158 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCc-cccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 69999999999999988776432 1111110 12345678899999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCC
Q 007627 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (595)
Q Consensus 224 s~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElG 300 (595)
|+.+|+++.++.+++. ++|+|+|++++|+|++ +.++.|++ ++|+|+||||+.+|+.|++.+ +++|+++|+|
T Consensus 159 s~~~p~~~~~l~~~l~----~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelG 232 (453)
T cd07094 159 ASKTPLSALELAKILV----EAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELG 232 (453)
T ss_pred CCcchHHHHHHHHHHH----HcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecC
Confidence 9999999998888765 5799999999999976 55899997 799999999999999999988 6899999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHH
Q 007627 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (595)
Q Consensus 301 Gk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~ 380 (595)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++
T Consensus 233 Gk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~ 312 (453)
T cd07094 233 GNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAA 312 (453)
T ss_pred CCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCC
Q 007627 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (595)
Q Consensus 381 ~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~g 460 (595)
+++++++++|+++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 313 ~~~~~~i~~a~~~Ga~v~~gg~-------~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~g 385 (453)
T cd07094 313 ERVERWVEEAVEAGARLLCGGE-------RDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYG 385 (453)
T ss_pred HHHHHHHHHHHHCCCEEEeCcc-------CCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCC
Confidence 9999999999999999999986 258899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 461 L~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|++||||+|.++++++++++++|+|+||++.... .+.+||||+|+||+|+++|++|+++||+.|+|+
T Consensus 386 L~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~-~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 386 LQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFR-TDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCC-CCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 9999999999999999999999999999985443 345899999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-94 Score=783.69 Aligned_cols=447 Identities=33% Similarity=0.513 Sum_probs=417.0
Q ss_pred ecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHH
Q 007627 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (595)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei 148 (595)
+||+||+++++++.++.+++++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+||+..++...|+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999866799
Q ss_pred HhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCch
Q 007627 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (595)
Q Consensus 149 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p 228 (595)
..+++.++++++..++.... ..+. ..+..++++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p 157 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGE-VIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTP 157 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCc-eecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCc
Confidence 99999999998876654321 1111 1234578999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceE
Q 007627 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305 (595)
Q Consensus 229 ~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~ 305 (595)
+++..+.+++. ++|+|+|++|+|+|+. +.++.|+. ++|+|+||||+.+|+.|++.++++++|+++|||||||+
T Consensus 158 ~~~~~l~~~~~----~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~ 233 (453)
T cd07115 158 LSALRIAELMA----EAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSAN 233 (453)
T ss_pred HHHHHHHHHHH----hcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCce
Confidence 99998887765 6899999999999965 67888887 79999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHH
Q 007627 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385 (595)
Q Consensus 306 IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~ 385 (595)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+|++.+++++++
T Consensus 234 iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 313 (453)
T cd07115 234 IVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLD 313 (453)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEE
Q 007627 386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465 (595)
Q Consensus 386 ~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asV 465 (595)
+|++|+++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||
T Consensus 314 ~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i 389 (453)
T cd07115 314 YVDVGREEGARLLTGGKRP----GARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGV 389 (453)
T ss_pred HHHHHHHCCCEEEeCCCCC----CCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEE
Confidence 9999999999999999731 236899999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEE
Q 007627 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 529 (595)
Q Consensus 466 ft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~ 529 (595)
||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|++||++|+++||+.|+++.
T Consensus 390 fs~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~ 451 (453)
T cd07115 390 WTRDLGRAHRVAAALKAGTVWINTYNRF--DPGSPFGGYKQSGFGREMGREALDEYTEVKSVWV 451 (453)
T ss_pred ECCCHHHHHHHHHhcCccEEEECCCCCC--CCCCCCCCcccccCCcCchHHHHHHhhceEEEEE
Confidence 9999999999999999999999986543 3458999999999999999999999999999865
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-94 Score=784.44 Aligned_cols=448 Identities=26% Similarity=0.415 Sum_probs=414.8
Q ss_pred EEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh
Q 007627 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (595)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~ 145 (595)
++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|.+++++|++++++|+||+..++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~- 79 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR- 79 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence 3678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hHHHhHHHHHHHHHHhchhhcCcccccC-CcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecC
Q 007627 146 GEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (595)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 224 (595)
.|+..+++.++++++.+.++........ .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 80 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps 159 (452)
T cd07147 80 GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPA 159 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECC
Confidence 6999999999999988776532211100 000123456788999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCc
Q 007627 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (595)
Q Consensus 225 ~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk 302 (595)
+.+|.++.++.++++ ++|+|+|+||+++|+.+.+..|+. ++|+|+||||+.+|+.|++.+++ +|+++|||||
T Consensus 160 ~~~p~~~~~l~~~l~----~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~ 233 (452)
T cd07147 160 SRTPLSALILGEVLA----ETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGN 233 (452)
T ss_pred CCCcHHHHHHHHHHH----HcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCC
Confidence 999999998887755 689999999999998788888886 99999999999999999998873 7999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHH
Q 007627 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (595)
Q Consensus 303 ~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~ 382 (595)
||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++.|+|.++++++|||+++.++++
T Consensus 234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 313 (452)
T cd07147 234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER 313 (452)
T ss_pred CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCce
Q 007627 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (595)
Q Consensus 383 ~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~ 462 (595)
+++++++++++|+++++||. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 314 ~~~~i~~a~~~Ga~~l~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~ 386 (452)
T cd07147 314 VEGWVNEAVDAGAKLLTGGK-------RDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQ 386 (452)
T ss_pred HHHHHHHHHHCCCEEEecCC-------cCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999987 24889999999999999999999999999999999999999999999999999
Q ss_pred eEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 463 asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+||||+|.++++++++++++|+|+||+..... ...+||||+|+||+|+++|++|+++||+.|+|+
T Consensus 387 ~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~ 451 (452)
T cd07147 387 AGVFTRDLEKALRAWDELEVGGVVINDVPTFR-VDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLV 451 (452)
T ss_pred EEEECCCHHHHHHHHHHcCcceEEECCCCCCC-CCCCCcCCccccccCCCChHHHHHHhcceeEEe
Confidence 99999999999999999999999999976443 335899999999999999999999999999985
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-94 Score=783.00 Aligned_cols=449 Identities=31% Similarity=0.478 Sum_probs=419.5
Q ss_pred ecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHH
Q 007627 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (595)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei 148 (595)
+||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++|+||+..++ ..|+
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev 79 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQA-GGEI 79 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HHHH
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999998 4799
Q ss_pred HhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCch
Q 007627 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (595)
Q Consensus 149 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p 228 (595)
..+++.++++++.+++++.....+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 156 (452)
T cd07102 80 RGMLERARYMISIAEEALADIRVPEK---DGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTP 156 (452)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCCC---CCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 99999999999998887655433221 234567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEE
Q 007627 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306 (595)
Q Consensus 229 ~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~I 306 (595)
+++..+.+++ .++|+|+|++|+|+|+.+.+..|++ ++|+|+||||+.+|+.|+++++++++|+++|||||||+|
T Consensus 157 ~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~i 232 (452)
T cd07102 157 LCGERFAAAF----AEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAY 232 (452)
T ss_pred HHHHHHHHHH----HhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceE
Confidence 9998776665 4689999999999997788899998 899999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHH
Q 007627 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386 (595)
Q Consensus 307 V~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~ 386 (595)
|++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..++++++++
T Consensus 233 V~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~ 312 (452)
T cd07102 233 VRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQ 312 (452)
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEe
Q 007627 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466 (595)
Q Consensus 387 i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVf 466 (595)
+++++++|+++++||.....+ +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 313 i~~a~~~ga~vl~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 391 (452)
T cd07102 313 IADAIAKGARALIDGALFPED-KAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVW 391 (452)
T ss_pred HHHHHhCCCEEEeCCCCCCCC-CCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 999999999999999743211 2468999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 467 t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|+|.+++.++++++++|+|+||++... .+.+||||+|+||+|+++|++|+++||+.|+++
T Consensus 392 t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 392 TKDIARAEALGEQLETGTVFMNRCDYL--DPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred cCCHHHHHHHHHHcCcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 999999999999999999999987532 345899999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-94 Score=783.75 Aligned_cols=447 Identities=30% Similarity=0.480 Sum_probs=415.0
Q ss_pred ecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhh
Q 007627 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146 (595)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~--W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~ 146 (595)
.||+||+++++++.++.+|+++++++|++||+. |+++|.++|.++|++++++|.+|+++|++++++|+||+..++. +
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-G 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence 589999999999999999999999999999985 9999999999999999999999999999999999999999984 7
Q ss_pred HHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCC
Q 007627 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226 (595)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~ 226 (595)
|+..+++.++|++...++... ...+. ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~ 157 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHG-DSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEF 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-ccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCC
Confidence 999999999999886654332 11111 112345678999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcc
Q 007627 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303 (595)
Q Consensus 227 ~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~ 303 (595)
+|+++.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+++|+.|++.++++++|+++||||||
T Consensus 158 ~p~~~~~l~~~~~----~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n 233 (454)
T cd07118 158 TSGTTLMLAELLI----EAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKN 233 (454)
T ss_pred CcHHHHHHHHHHH----hcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCC
Confidence 9999998777654 6899999999999976 57888997 899999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHH
Q 007627 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383 (595)
Q Consensus 304 p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~ 383 (595)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 234 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~ 313 (454)
T cd07118 234 PQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKI 313 (454)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCcee
Q 007627 384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463 (595)
Q Consensus 384 ~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~a 463 (595)
+++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 314 ~~~i~~a~~~ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~ 390 (454)
T cd07118 314 TDYVDAGRAEGATLLLGGERLA---SAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSA 390 (454)
T ss_pred HHHHHHHHhCCCEEEeCCCCCC---CCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceE
Confidence 9999999999999999998421 1368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 464 sVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++||+.|++.
T Consensus 391 ~vft~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 391 GVWSKDIDTALTVARRIRAGTVWVNTFLDG--SPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred EEECCCHHHHHHHHHhcCcCEEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999999999999997543 345899999999999999999999999999974
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-95 Score=793.56 Aligned_cols=459 Identities=34% Similarity=0.558 Sum_probs=424.5
Q ss_pred ccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh
Q 007627 57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 136 (595)
Q Consensus 57 ~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~ 136 (595)
|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 556655 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcC
Q 007627 137 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG 216 (595)
Q Consensus 137 Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaG 216 (595)
||+..++.. |+..+++.++++++++++. ..+..+.+ .+...++.++|+|||++|+|||||+.+++.++++||++|
T Consensus 80 Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaG 154 (462)
T PF00171_consen 80 GKPIAEARG-EVDRAIDFLRYYADAARKL-AGEVLPSD---PGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAG 154 (462)
T ss_dssp TSSHHHHHH-HHHHHHHHHHHHHHHHHHH-TEEEEEES---TTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT
T ss_pred ccccccccc-hhhhhhhhhhhhhhcccce-ehhhcccc---cccccccccccccceeecccccccccccccchhhhhccc
Confidence 999999965 9999999999999998883 33333222 456789999999999999999999999999999999999
Q ss_pred CEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCC
Q 007627 217 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293 (595)
Q Consensus 217 N~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~ 293 (595)
|+||+|||+.+|.++.++.+++. ++|+|+|++|+++|++ +.+..|++ ++|.|+||||+++|+.|++.++++++
T Consensus 155 N~VVlkps~~~~~~~~~l~~~~~----~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~ 230 (462)
T PF00171_consen 155 NTVVLKPSEQAPLTALLLAELLE----EAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLK 230 (462)
T ss_dssp -EEEEEEBTTSHHHHHHHHHHHH----HHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTS
T ss_pred ccceeeeccccccccccchhhcc----ccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccc
Confidence 99999999999999988888766 4799999999999955 78899987 99999999999999999999999999
Q ss_pred cEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCccc
Q 007627 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373 (595)
Q Consensus 294 pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~ 373 (595)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||
T Consensus 231 ~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gp 310 (462)
T PF00171_consen 231 PVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGP 310 (462)
T ss_dssp EEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCH
T ss_pred cccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHH
Q 007627 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 453 (595)
Q Consensus 374 li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~ 453 (595)
+++.++++++++++++++++||++++||. ........|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 311 l~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 389 (462)
T PF00171_consen 311 LISKAQRERVKALIEDAVAEGAKVLCGGE-PQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIAL 389 (462)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTSEEEEETS-SSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHH
T ss_pred cccchhhhhcccccccccccccccccccc-cccccccccccccccccccccccccccccccccccceecccccchhhhhc
Confidence 99999999999999999999999999994 12223568999999999999999999999999999999999999999999
Q ss_pred hhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 454 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 454 aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
+|+++|||++||||+|.++++++++++++|+|+||++....... +||||+|.||+|+++|.+|+++||+.|+|
T Consensus 390 ~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 390 ANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp HHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred ccccCCCceeEEecccccccccccccccccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 99999999999999999999999999999999999997776555 79999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-93 Score=781.51 Aligned_cols=449 Identities=31% Similarity=0.502 Sum_probs=414.1
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh-hhhhhh
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM-VDASLG 146 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~-~ea~~~ 146 (595)
++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|.+++++|++++++|+||+. .++ .+
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a-~~ 79 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQA-RP 79 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHH-HH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 577 47
Q ss_pred HHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCC
Q 007627 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226 (595)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~ 226 (595)
|+..+++.++++++..++. ..+..+.. .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 80 ev~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~ 155 (457)
T cd07108 80 EAAVLADLFRYFGGLAGEL-KGETLPFG---PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAED 155 (457)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCceeccC---CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 9999999999988776543 32322221 2345678899999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcc
Q 007627 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303 (595)
Q Consensus 227 ~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~ 303 (595)
+|.++.++.+++.++ +|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|++.++++++|+++||||||
T Consensus 156 ~p~~~~~l~~~~~~~-----lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~ 230 (457)
T cd07108 156 APLAVLLLAEILAQV-----LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKS 230 (457)
T ss_pred CcHHHHHHHHHHHHh-----CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCC
Confidence 999999988887642 9999999999865 67888887 799999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHH-HHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHH
Q 007627 304 AFIVCDDVDVPHVAQIAVRA-ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (595)
Q Consensus 304 p~IV~~daDl~~aa~~i~~~-~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~ 382 (595)
|+||++|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++++
T Consensus 231 ~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 310 (457)
T cd07108 231 PMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAK 310 (457)
T ss_pred eeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999 59999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-cCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCc
Q 007627 383 LQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (595)
Q Consensus 383 ~~~~i~~a~~-~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL 461 (595)
++++++++++ +|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 311 ~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 390 (457)
T cd07108 311 VCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGL 390 (457)
T ss_pred HHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCc
Confidence 9999999998 999999999753222234689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHH-HhccceeeEEE
Q 007627 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG-LRACCLVKSVV 528 (595)
Q Consensus 462 ~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~g-l~~~t~~k~v~ 528 (595)
++||||+|.++++++++++++|+|+||+.... .+.+||||+|.||+|+++|.++ +++||+.|+++
T Consensus 391 s~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 391 AAYVWTRDLGRALRAAHALEAGWVQVNQGGGQ--QPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred eeEEEcCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 99999999999999999999999999998543 3458999999999999999977 69999999985
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-93 Score=786.82 Aligned_cols=470 Identities=18% Similarity=0.258 Sum_probs=413.6
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHH-HHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ-KVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~-~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
++||+|+|+.+. +.+++++||+||+++++++. +.+|+++|+++|++|+ +.|+++|..+|.++|++++++|++++++|
T Consensus 6 ~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 83 (521)
T PRK11903 6 ANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAY 83 (521)
T ss_pred hhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999998753 46799999999999999997 8899999999999995 99999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcc----c-ccccceEEEec-ceEEEEEcCcchhh
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS----M-IHKKAKVEFHP-LGVVGAIVSWNYPF 202 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~v~~~P-lGVV~~I~p~N~P~ 202 (595)
++++++|+|||..++. +|+..+++.++|+++.++............. . ......+.|+| +|||++|+|||||+
T Consensus 84 a~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 162 (521)
T PRK11903 84 YDIATANSGTTRNDSA-VDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPA 162 (521)
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHH
Confidence 9999999999999985 6999999999999988765432111110100 0 11234678899 59999999999999
Q ss_pred HhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEeeeCCh-hHHHHHHhCCCEEEEeCChhH
Q 007627 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSPGV 280 (595)
Q Consensus 203 ~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aG-lp~g~v~vv~g~~-~~~~~L~~~vd~I~ftGS~~~ 280 (595)
+++++++++||++||+||+|||+.+|+++..+.+++. ++| +|+|++|+|+|++ +.++.| .++|+|+||||+.+
T Consensus 163 ~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~----~ag~lP~gv~~~v~g~~~~~~~~l-~~v~~v~fTGS~~~ 237 (521)
T PRK11903 163 WGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVV----AAGILPAGALSVVCGSSAGLLDHL-QPFDVVSFTGSAET 237 (521)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHH----HhCCCCcCceEEeeCCchHHHhcc-cCCCEEEEECCHHH
Confidence 9999999999999999999999999999998888765 578 9999999999965 444444 58999999999999
Q ss_pred HHHHHHHh--hcCCCcEeecCCCcceEEEcCCCC-----HHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHH
Q 007627 281 GRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353 (595)
Q Consensus 281 g~~v~~~a--a~~l~pv~lElGGk~p~IV~~daD-----l~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~ 353 (595)
|++|++.+ +++++|+++|||||||+||++||| ++.+++.+++|+|.|+||.|++++|||||+++||+|+++|+
T Consensus 238 G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~ 317 (521)
T PRK11903 238 AAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALA 317 (521)
T ss_pred HHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHH
Confidence 99999965 489999999999999999999999 59999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCC--CCCCCcccCCeeeecCCC--CCcc
Q 007627 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS--EGAVDQYFPPTVIVNVNH--TMKL 429 (595)
Q Consensus 354 ~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~--~~~~g~~~~PTvl~~v~~--~~~i 429 (595)
++++++++|+|.++++++||||++.++++++++|+.+ .+|+++++||.....+ ...+|+|++|||+.++++ +|.+
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i 396 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAV 396 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchH
Confidence 9999999999999999999999999999999999964 5799999999743211 123589999999987654 4789
Q ss_pred cccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh--ccCCeeecCCCc-------ccccCCCC
Q 007627 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFAS-------NYMCQSLP 500 (595)
Q Consensus 430 ~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l--~~G~v~IN~~~~-------~~~~~~~P 500 (595)
++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++ ++|+|+||+... ....+.+|
T Consensus 397 ~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~P 476 (521)
T PRK11903 397 HDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSL 476 (521)
T ss_pred HhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999997532 11234589
Q ss_pred CCCcCCCCCCCCCc-HHHHhccceeeEEE
Q 007627 501 FGGVKDSGFGRFAG-VEGLRACCLVKSVV 528 (595)
Q Consensus 501 fGG~~~SG~G~~~G-~~gl~~~t~~k~v~ 528 (595)
|||+|.||+||++| .+++++||+.|++.
T Consensus 477 fGG~k~SG~Gr~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 477 HGGPGRAGGGEELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred CCCCCcCcCCcccccHHHHHHHhccceee
Confidence 99999999999955 89999999977764
|
|
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-93 Score=779.29 Aligned_cols=465 Identities=30% Similarity=0.440 Sum_probs=430.1
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKS-SFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~-~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+.|+++ +.++|.++|+++++.|.+++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3579999998865 6789999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcc--cccccceEEEecceEEEEEcCcchhhHhh
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
|++++++|+||+..++. .|+..+++.++++++..+++... ..+.... ..+...+++++|+|||++|+|||||+.++
T Consensus 81 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 158 (473)
T cd07082 81 VANLLMWEIGKTLKDAL-KEVDRTIDYIRDTIEELKRLDGD-SLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLT 158 (473)
T ss_pred HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHHHHHhcCC-cccccccccCCCceeEEEEecceEEEEECCcCcHHHHH
Confidence 99999999999999985 69999999999999888776432 1111110 12445789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|.++.++.+++. ++|+|+|++++++|++ +.++.|++ ++|.|+||||+.+|+
T Consensus 159 ~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~----~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~ 234 (473)
T cd07082 159 VSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFH----DAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGN 234 (473)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 9999999999999999999999999988777654 6899999999999966 56888886 999999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|
T Consensus 235 ~i~~~a~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g 312 (473)
T cd07082 235 RLKKQHP--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVG 312 (473)
T ss_pred HHHHHhC--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCC
Confidence 9999987 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++||++++++++++++++++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 313 ~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~ 386 (473)
T cd07082 313 MPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR------EGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPII 386 (473)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCeEEeeEEEecCCCCCHHHhCcCcCceEEEE
Confidence 99999999999999999999999999999999999999973 238999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||++.... ...+||||+|.||+|+++|.+|+++||
T Consensus 387 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~pfGG~k~SG~g~~~g~~~l~~~~ 465 (473)
T cd07082 387 RVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRG-PDHFPFLGRKDSGIGTQGIGDALRSMT 465 (473)
T ss_pred EeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCcccccccCCCChHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999976553 335899999999999999999999999
Q ss_pred eeeEEEE
Q 007627 523 LVKSVVE 529 (595)
Q Consensus 523 ~~k~v~~ 529 (595)
+.|++..
T Consensus 466 ~~k~i~~ 472 (473)
T cd07082 466 RRKGIVI 472 (473)
T ss_pred ceeEEEE
Confidence 9999865
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-93 Score=808.90 Aligned_cols=470 Identities=22% Similarity=0.300 Sum_probs=417.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A-~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+++++.+|.++|++++++|++|+++
T Consensus 5 ~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~e 82 (675)
T PRK11563 5 LQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEE 82 (675)
T ss_pred ccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 468999999886 45789999999999999999987 6999999999998 79999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcC-------cccccCCcccccccceEEEecc-eEEEEEcCcc
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK-------PEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWN 199 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~v~~~Pl-GVV~~I~p~N 199 (595)
|++ +++|+||+..++. .|+..+++.++|++..+++.+. .+..+... ......++.++|+ |||++|+|||
T Consensus 83 la~-l~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~GVv~~I~PwN 159 (675)
T PRK11563 83 LYA-LSAQTGATRRDSW-IDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSK-GGTFAGRHILTPLEGVAVHINAFN 159 (675)
T ss_pred HHH-HHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccCCccccccC-CCcccceEEEeecCceEEEECCCc
Confidence 998 5899999999985 5999999999999988766442 11111100 0012257889997 9999999999
Q ss_pred hhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEeeeCChhHHHHHHh--CCCEEEEeC
Q 007627 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAETGEALVS--SVDKIIFVG 276 (595)
Q Consensus 200 ~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aG-lp~g~v~vv~g~~~~~~~L~~--~vd~I~ftG 276 (595)
||+.++++++++||++||+||+||||.+|+++..+.+++. ++| +|+|++|+|+|+.. +.+.. .+|+|+|||
T Consensus 160 fP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~----eaG~~P~gv~~vv~g~~~--~~~~~~~~i~~v~FTG 233 (675)
T PRK11563 160 FPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIV----ESGLLPEGALQLICGSAG--DLLDHLDGQDVVTFTG 233 (675)
T ss_pred hHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHH----HcCCCCCCcEEEeeCCHH--HHhhcCCCCCEEEEEC
Confidence 9999999999999999999999999999999988888765 688 99999999998642 22222 799999999
Q ss_pred ChhHHHHHHHH--hhcCCCcEeecCCCcceEEEcCCCC-----HHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHH
Q 007627 277 SPGVGRMIMRN--ASKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349 (595)
Q Consensus 277 S~~~g~~v~~~--aa~~l~pv~lElGGk~p~IV~~daD-----l~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~ 349 (595)
|+++|++|++. ++++++|+++|||||||+||++||| ++.|++.+++|+|.|+||.|++++|||||+++||+|+
T Consensus 234 S~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~ 313 (675)
T PRK11563 234 SAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVI 313 (675)
T ss_pred cHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHH
Confidence 99999999985 5589999999999999999999995 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCC---CCCCCCCcccCCeeeecCCC-
Q 007627 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH---LSEGAVDQYFPPTVIVNVNH- 425 (595)
Q Consensus 350 ~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~---~~~~~~g~~~~PTvl~~v~~- 425 (595)
++|+++++++++|+|.++++++|||+++.++++++++|++|+++ |++++||.... .+....|+|++|||+.++++
T Consensus 314 ~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~ 392 (675)
T PRK11563 314 EALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPL 392 (675)
T ss_pred HHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCch
Confidence 99999999999999999999999999999999999999999998 99999996321 11123689999999999998
Q ss_pred -CCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc--cCCeeecCCCc-------ccc
Q 007627 426 -TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFAS-------NYM 495 (595)
Q Consensus 426 -~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~--~G~v~IN~~~~-------~~~ 495 (595)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++ +|+|+||+.+. ...
T Consensus 393 ~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~ 472 (675)
T PRK11563 393 EAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSP 472 (675)
T ss_pred hhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCC
Confidence 57999999999999999999999999999999999999999999999999999997 99999997531 112
Q ss_pred cCCCCCCCcCCCCCCCC-CcHHHHhccceeeEEEEc
Q 007627 496 CQSLPFGGVKDSGFGRF-AGVEGLRACCLVKSVVED 530 (595)
Q Consensus 496 ~~~~PfGG~~~SG~G~~-~G~~gl~~~t~~k~v~~~ 530 (595)
.+.+||||+|.||+|++ +|.+|+++|++.|+|..-
T Consensus 473 ~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 473 LPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred CcCCCcCCCCCCCCCccccchhHHHHhheeeeeecC
Confidence 24589999999999999 569999999999998654
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-93 Score=779.95 Aligned_cols=460 Identities=22% Similarity=0.323 Sum_probs=419.5
Q ss_pred CCCCCCCCCcccccCCcccCCCCCCeEEeecCCCC-cEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 007627 40 DDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATM-KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118 (595)
Q Consensus 40 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg-~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~ 118 (595)
.|..+.++ .-+||+|+|+. ++.+++++||+|+ +++++++.++.+|+++++++|++||+.|+++|..+|.++|++++
T Consensus 30 ~~~~~~~~-~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a 106 (500)
T TIGR01238 30 AWADKTWQ-AAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLA 106 (500)
T ss_pred HHhcCcee-cCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 34444442 24699999986 4678999999996 89999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCc
Q 007627 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 198 (595)
Q Consensus 119 ~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~ 198 (595)
++|++++++|++++++|+||+..++ ..|+..+++.++++++..++++. ...++|+|||++|+||
T Consensus 107 ~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~a~~~~~~~~---------------~~~~~P~GVV~~I~pw 170 (500)
T TIGR01238 107 DLLELHMPELMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLG---------------EFSVESRGVFVCISPW 170 (500)
T ss_pred HHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC---------------ceeccCcceEEEECCC
Confidence 9999999999999999999999998 46999999999999988765431 1368999999999999
Q ss_pred chhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEe
Q 007627 199 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFV 275 (595)
Q Consensus 199 N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ft 275 (595)
|||+.++++++++||++||+||+|||+.+|+++..+.+++. ++|+|+|+||+|+|++ +.++.|+. ++|+|+||
T Consensus 171 N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ft 246 (500)
T TIGR01238 171 NFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQ----EAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFT 246 (500)
T ss_pred chHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHH----HcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEE
Confidence 99999999999999999999999999999999988776654 6899999999999875 78888887 99999999
Q ss_pred CChhHHHHHHHHhhcCC---CcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHH
Q 007627 276 GSPGVGRMIMRNASKTL---TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352 (595)
Q Consensus 276 GS~~~g~~v~~~aa~~l---~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L 352 (595)
||+.+|+.|++.|++++ +|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|
T Consensus 247 Gs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L 326 (500)
T TIGR01238 247 GSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMI 326 (500)
T ss_pred CCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHH
Confidence 99999999999999887 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCccccc
Q 007627 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 432 (595)
Q Consensus 353 ~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~e 432 (595)
+++++++++|+|.++++++||++++.++++++++|++++++|++++.++... ......|+|++|||+.+ ++|.+++|
T Consensus 327 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~-~~~~~~g~f~~PTvl~~--~~~~~~~e 403 (500)
T TIGR01238 327 QGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDD-SRACQHGTFVAPTLFEL--DDIAELSE 403 (500)
T ss_pred HHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCC-CCCCCCCeeEcCEEEcc--CCchHhhC
Confidence 9999999999999999999999999999999999999999999987543210 00124689999999974 68999999
Q ss_pred ccccCceeEEeeC--CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC
Q 007627 433 EAFGPIMPIMKFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG 510 (595)
Q Consensus 433 E~FGPVl~v~~~~--~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G 510 (595)
|+||||++|++|+ ++||||+++|+++|||++||||+|.+.++++++++++|+|+||+...+.....+||||+|.||+|
T Consensus 404 E~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G 483 (500)
T TIGR01238 404 EVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTG 483 (500)
T ss_pred CCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCC
Confidence 9999999999998 79999999999999999999999999999999999999999999765544345799999999999
Q ss_pred -CCCcHHHHhccceee
Q 007627 511 -RFAGVEGLRACCLVK 525 (595)
Q Consensus 511 -~~~G~~gl~~~t~~k 525 (595)
+.+|.+++++||+.|
T Consensus 484 ~~~gg~~~~~~~~~~k 499 (500)
T TIGR01238 484 PKAGGPHYLYRLTQVQ 499 (500)
T ss_pred CccCCHHHHHHHHhhc
Confidence 899999999999876
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-93 Score=774.85 Aligned_cols=446 Identities=29% Similarity=0.481 Sum_probs=414.7
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhH
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~E 147 (595)
++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++...|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998876679
Q ss_pred HHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCc
Q 007627 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (595)
Q Consensus 148 i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~ 227 (595)
+..+++.+++++...+...... .+. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~ 157 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPA-AGE--YLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETT 157 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcc-cCc--cCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 9999999999987766542211 111 1123456789999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcce
Q 007627 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304 (595)
Q Consensus 228 p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p 304 (595)
|+++.++.++++ + |+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|++.++++++|+++|||||||
T Consensus 158 ~~~~~~l~~~~~----~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p 232 (450)
T cd07092 158 PLTTLLLAELAA----E-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAP 232 (450)
T ss_pred hHHHHHHHHHHH----h-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCe
Confidence 999999888875 4 99999999999876 47888887 8999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHH
Q 007627 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384 (595)
Q Consensus 305 ~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~ 384 (595)
+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++++++++++
T Consensus 233 ~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~ 312 (450)
T cd07092 233 VIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVA 312 (450)
T ss_pred eEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeE
Q 007627 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464 (595)
Q Consensus 385 ~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~as 464 (595)
++|+++. +|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 313 ~~i~~a~-~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ 387 (450)
T cd07092 313 GFVERAP-AHARVLTGGRRA----EGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASS 387 (450)
T ss_pred HHHHHHH-cCCEEEeCCCCC----CCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEE
Confidence 9999999 999999999742 23689999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 465 Vft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|||+|.++++++++++++|+|+||+.... .+.+||||+|+||+|++||++|+++||+.|+++
T Consensus 388 vft~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 388 VWTRDVGRAMRLSARLDFGTVWVNTHIPL--AAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred EECCCHHHHHHHHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 99999999999999999999999987653 345899999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-92 Score=771.43 Aligned_cols=438 Identities=31% Similarity=0.474 Sum_probs=407.2
Q ss_pred CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHH
Q 007627 74 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 153 (595)
Q Consensus 74 g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 153 (595)
|+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+||+..++. .|+..+++
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~ 79 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIG 79 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999998884 69999999
Q ss_pred HHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHH-H
Q 007627 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-C 232 (595)
Q Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~-~ 232 (595)
.++++++..++.... ..+. ..+..++++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++ .
T Consensus 80 ~l~~~~~~~~~~~~~-~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 155 (443)
T cd07152 80 ELHEAAGLPTQPQGE-ILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGV 155 (443)
T ss_pred HHHHHHHhHHHhCCc-cccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHH
Confidence 999998766543221 1111 1234568899999999999999999999999999999999999999999999996 4
Q ss_pred HHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCC
Q 007627 233 FYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310 (595)
Q Consensus 233 ~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~d 310 (595)
.+.+ +|.++|+|+|++|+|+|+.+.++.|+. ++|.|+||||+.+|+.|+++++++++|+++|||||||+||++|
T Consensus 156 ~l~~----~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 231 (443)
T cd07152 156 VIAR----LFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDD 231 (443)
T ss_pred HHHH----HHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCC
Confidence 5554 455799999999999997788888987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHH
Q 007627 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 390 (595)
Q Consensus 311 aDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a 390 (595)
||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++++++|+++
T Consensus 232 Adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 311 (443)
T cd07152 232 ADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDS 311 (443)
T ss_pred CCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcH
Q 007627 391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 470 (595)
Q Consensus 391 ~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~ 470 (595)
+++|+++++||. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 312 ~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 384 (443)
T cd07152 312 VAAGARLEAGGT-------YDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDV 384 (443)
T ss_pred HhCCCEEEeccC-------cCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCH
Confidence 999999999997 2488999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceeeEEE
Q 007627 471 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 471 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k~v~ 528 (595)
++++++++++++|+|+||+..... .+.+||||+|.||+| +++|++||++||+.|+++
T Consensus 385 ~~a~~~~~~l~~G~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 385 GRAMALADRLRTGMLHINDQTVND-EPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred HHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 999999999999999999976653 345999999999999 888999999999999975
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-92 Score=770.81 Aligned_cols=451 Identities=34% Similarity=0.543 Sum_probs=415.8
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~ 145 (595)
++||+||+++++++.++.+|+++++++|++|+. .|+++|.++|.++|++++++|.+++++|++++++|+||+..++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~- 79 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR- 79 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-
Confidence 479999999999999999999999999999997 59999999999999999999999999999999999999999984
Q ss_pred hHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCC
Q 007627 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225 (595)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 225 (595)
.|+..+++.+++++...++.. ....+.. ..+..+++.++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 80 ~ev~~~~~~~~~~a~~~~~~~-~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~ 156 (457)
T cd07114 80 AQVRYLAEWYRYYAGLADKIE-GAVIPVD--KGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSE 156 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CcccccC--CCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCc
Confidence 699999999999887665432 1211111 1234578899999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCc
Q 007627 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (595)
Q Consensus 226 ~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk 302 (595)
.+|+++..+.+++. ++|+|+|+||+|+|++ +.++.|++ ++|.|+||||+.+|+.|++.++++++|+++|+|||
T Consensus 157 ~~p~~~~~l~~~l~----~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~ 232 (457)
T cd07114 157 HTPASTLELAKLAE----EAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGK 232 (457)
T ss_pred cchHHHHHHHHHHH----HcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCC
Confidence 99999998887765 6899999999999965 57888887 89999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHH
Q 007627 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (595)
Q Consensus 303 ~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~ 382 (595)
||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||++++++++
T Consensus 233 ~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 312 (457)
T cd07114 233 SPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEK 312 (457)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCce
Q 007627 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462 (595)
Q Consensus 383 ~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~ 462 (595)
++++|++++++|+++++||.....+....|.|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+
T Consensus 313 ~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~ 392 (457)
T cd07114 313 VERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLA 392 (457)
T ss_pred HHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCce
Confidence 99999999999999999997533222236899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 463 asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+||||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+++|.+|+++||+.|++.
T Consensus 393 ~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 393 AGIWTRDLARAHRVARAIEAGTVWVNTYRAL--SPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred eEEECCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999999999986543 345899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-92 Score=765.70 Aligned_cols=426 Identities=31% Similarity=0.564 Sum_probs=400.5
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcC
Q 007627 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167 (595)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~ 167 (595)
+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++.++|++..+++++.
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~ 79 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLA 79 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999999999999999999999999995 6999999999999999988876
Q ss_pred cccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCC
Q 007627 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247 (595)
Q Consensus 168 ~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGl 247 (595)
++..+.+ +..++++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++. ++|+
T Consensus 80 ~~~~~~~----~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~----~agl 151 (429)
T cd07100 80 DEPIETD----AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFR----EAGF 151 (429)
T ss_pred CeeccCC----CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HcCC
Confidence 5544332 3456789999999999999999999999999999999999999999999999988777654 6899
Q ss_pred CCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHH
Q 007627 248 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 325 (595)
Q Consensus 248 p~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f 325 (595)
|+|++|+|+|+.+.+..|++ ++|+|.||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++|+|
T Consensus 152 P~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~ 231 (429)
T cd07100 152 PEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL 231 (429)
T ss_pred CcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 99999999997777888887 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCC
Q 007627 326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 405 (595)
Q Consensus 326 ~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~ 405 (595)
.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...
T Consensus 232 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~- 310 (429)
T cd07100 232 QNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRP- 310 (429)
T ss_pred hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999742
Q ss_pred CCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCe
Q 007627 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485 (595)
Q Consensus 406 ~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v 485 (595)
...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|
T Consensus 311 ---~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v 387 (429)
T cd07100 311 ---DGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMV 387 (429)
T ss_pred ---CCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeE
Confidence 23589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 486 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 486 ~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+||++... .+.+||||+|.||+|+++|++||++||+.|++.
T Consensus 388 ~iN~~~~~--~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 388 FINGMVKS--DPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred EECCCCCC--CCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 99987643 345899999999999999999999999999984
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-92 Score=768.90 Aligned_cols=450 Identities=32% Similarity=0.501 Sum_probs=418.3
Q ss_pred ecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHH
Q 007627 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148 (595)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei 148 (595)
+||+||+++++++.++.+|+++++++|++||..|+++|.++|.++|+++++.|.+++++|++++++|+||+..++...|+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev 81 (455)
T cd07093 2 FNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDI 81 (455)
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999988876799
Q ss_pred HhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCch
Q 007627 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228 (595)
Q Consensus 149 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p 228 (595)
..+++.++++++...+. .....+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 82 ~~~i~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p 157 (455)
T cd07093 82 PRAAANFRFFADYILQL-DGESYPQD---GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTP 157 (455)
T ss_pred HHHHHHHHHHHHhHHHh-CCccccCC---CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCc
Confidence 99999999999887663 22222111 245677899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceE
Q 007627 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305 (595)
Q Consensus 229 ~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~ 305 (595)
+++..+.+++. ++|+|+|+||+++|.+ +.++.|++ ++|.|+||||+.+|+.|++.|+++++|+++|||||||+
T Consensus 158 ~~~~~l~~~l~----~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~ 233 (455)
T cd07093 158 LTAWLLAELAN----EAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPN 233 (455)
T ss_pred HHHHHHHHHHH----hcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCce
Confidence 99988777665 6899999999999964 67888887 79999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHH
Q 007627 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385 (595)
Q Consensus 306 IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~ 385 (595)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++
T Consensus 234 iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 313 (455)
T cd07093 234 IVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLG 313 (455)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEE
Q 007627 386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465 (595)
Q Consensus 386 ~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asV 465 (595)
++++|+++|+++++||.....+....|.|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||
T Consensus 314 ~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i 393 (455)
T cd07093 314 YVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYV 393 (455)
T ss_pred HHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEE
Confidence 99999999999999997533222245899999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 466 ft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|++||++|+++||+.|++.
T Consensus 394 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 394 WTRDLGRAHRVARRLEAGTVWVNCWLVRD--LRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred ECCCHHHHHHHHHhCCcceEEECCCCCCC--CCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 99999999999999999999999986543 35899999999999999999999999999984
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-92 Score=762.53 Aligned_cols=440 Identities=29% Similarity=0.472 Sum_probs=403.0
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcc
Q 007627 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (595)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 169 (595)
+.+++|++||+.|++++..+|.++|++++++|++|.++|++++++|+||+..|+...|+..+++.++|+++.++++..++
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56889999999999999999999999999999999999999999999999999976799999999999999888776543
Q ss_pred cccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 007627 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~ 249 (595)
..+......+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++++ + +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~----a-lP~ 156 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEE----T-FDE 156 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHH----h-CCC
Confidence 32222111234678999999999999999999999999999999999999999999999999998888764 4 999
Q ss_pred CcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcC
Q 007627 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (595)
Q Consensus 250 g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~ 328 (595)
|++|+|+|+.+.+..|++ .+|.|+||||+++|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+
T Consensus 157 gv~~~v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~ 236 (449)
T cd07136 157 EYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNA 236 (449)
T ss_pred CEEEEEeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHccc
Confidence 999999997788999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCC
Q 007627 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408 (595)
Q Consensus 329 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~ 408 (595)
||.|++++|||||+++||+|+++|++++++++.|+|.+ ++++||++++.++++++++|+++ ++++||..
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~----- 305 (449)
T cd07136 237 GQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT----- 305 (449)
T ss_pred CCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCc-----
Confidence 99999999999999999999999999999999999986 88999999999999999999863 89999973
Q ss_pred CCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeec
Q 007627 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488 (595)
Q Consensus 409 ~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN 488 (595)
+.+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus 306 ~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN 385 (449)
T cd07136 306 DRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIN 385 (449)
T ss_pred CCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 23689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCcch
Q 007627 489 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN 551 (595)
Q Consensus 489 ~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~~~ 551 (595)
+.......+.+||||+|.||+|+++|.+|+++||+.|+|+.+.. .++.+++||+...
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~------~~~~~~~~~~~~~ 442 (449)
T cd07136 386 DTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKST------WFDLPLRYPPYKG 442 (449)
T ss_pred CccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEcCC------cCCccccCCCCch
Confidence 87544434568999999999999999999999999999987742 3456789988543
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-91 Score=764.13 Aligned_cols=443 Identities=27% Similarity=0.431 Sum_probs=408.0
Q ss_pred EeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhh
Q 007627 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146 (595)
Q Consensus 67 ~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~ 146 (595)
+++||+||+++++++.++.+|+++++++|+++ |++++.++|.++|+++++.|++++++|++++++|+||+..++. +
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ 77 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR-Y 77 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-H
Confidence 57899999999999999999999999998865 8889999999999999999999999999999999999999984 6
Q ss_pred HHHhHHHHHHHHHHhchhhcCcccccCCcc--cccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecC
Q 007627 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (595)
Q Consensus 147 Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 224 (595)
|+..+++.++|+++...++... ..+.... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 78 ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps 156 (451)
T cd07146 78 EVGRAADVLRFAAAEALRDDGE-SFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPS 156 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCc-ccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECC
Confidence 9999999999999887665321 1111110 023456789999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCC
Q 007627 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (595)
Q Consensus 225 ~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGG 301 (595)
+.+|+++..+.+++ .++|+|+|++|+++|++ +.++.|++ ++|.|+||||+.+|+.|++.++ ++|+++||||
T Consensus 157 ~~~p~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG 230 (451)
T cd07146 157 EKTPLSAIYLADLL----YEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGG 230 (451)
T ss_pred CCchHHHHHHHHHH----HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCC
Confidence 99999998777765 46899999999999975 67888997 9999999999999999999876 7899999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHH
Q 007627 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (595)
Q Consensus 302 k~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~ 381 (595)
|||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus 231 ~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~ 310 (451)
T cd07146 231 NDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAI 310 (451)
T ss_pred CceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCc
Q 007627 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (595)
Q Consensus 382 ~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL 461 (595)
++++++++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 311 ~v~~~v~~a~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 383 (451)
T cd07146 311 QIENRVEEAIAQGARVLLGNQ-------RQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGL 383 (451)
T ss_pred HHHHHHHHHHhCCCEEEeCCC-------cCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCc
Confidence 999999999999999999987 2588999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCC-CCCCcHHHHhccceeeEEE
Q 007627 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF-GRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 462 ~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~-G~~~G~~gl~~~t~~k~v~ 528 (595)
++||||+|.++++++++++++|+|+||+...+. .+.+||||+|.||+ |+++|++|+++||+.|++.
T Consensus 384 ~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 384 SSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFR-SELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred eEEEECCCHHHHHHHHHHCCcceEEECCCCCCC-CCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 999999999999999999999999999975433 34589999999995 8999999999999999984
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-91 Score=765.24 Aligned_cols=447 Identities=29% Similarity=0.472 Sum_probs=413.4
Q ss_pred EEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh
Q 007627 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145 (595)
Q Consensus 66 ~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~ 145 (595)
|+++||+||+++++++.++.+++++++++|++||..|+++|.++|.++|+++++.|.++.++|++++++|+||+..++.
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~- 79 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDAR- 79 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH-
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hHHHhHHHHHHHHHHhchhhcCcccccCCcc--cccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEec
Q 007627 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (595)
Q Consensus 146 ~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKp 223 (595)
.|+..+++.++++++.++++.... .+.... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 80 ~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kp 158 (453)
T cd07149 80 KEVDRAIETLRLSAEEAKRLAGET-IPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKP 158 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEEC
Confidence 699999999999988876653321 111100 01234578899999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCC
Q 007627 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (595)
Q Consensus 224 s~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElG 300 (595)
|+.+|.++.++.++++ ++|+|+|++|+|+|+. +.++.|++ ++|+|+||||+.+|+.|++.++ ++|+++|||
T Consensus 159 s~~~p~~~~~l~~~l~----~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelG 232 (453)
T cd07149 159 ASQTPLSALKLAELLL----EAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELG 232 (453)
T ss_pred CCcchHHHHHHHHHHH----HcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecC
Confidence 9999999998877765 5899999999999976 45888887 8999999999999999999875 899999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHH
Q 007627 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (595)
Q Consensus 301 Gk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~ 380 (595)
||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++
T Consensus 233 Gk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~ 312 (453)
T cd07149 233 SNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEA 312 (453)
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCC
Q 007627 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (595)
Q Consensus 381 ~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~g 460 (595)
+++++++++++.+|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 313 ~~~~~~i~~a~~~ga~v~~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 385 (453)
T cd07149 313 ERIEEWVEEAVEGGARLLTGGK-------RDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYG 385 (453)
T ss_pred HHHHHHHHHHHHCCCEEEeCCC-------CCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcC
Confidence 9999999999999999999987 247899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 461 L~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|++||||+|.++++++++++++|+|+||+...... ..+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 386 Lt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~-~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 386 LQAGVFTNDLQKALKAARELEVGGVMINDSSTFRV-DHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred ceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCC-CCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99999999999999999999999999999865433 35899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-91 Score=762.52 Aligned_cols=447 Identities=35% Similarity=0.571 Sum_probs=417.0
Q ss_pred eecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhH
Q 007627 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147 (595)
Q Consensus 68 ~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~E 147 (595)
++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++. .|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e 79 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-GE 79 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999985 69
Q ss_pred HHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCc
Q 007627 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227 (595)
Q Consensus 148 i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~ 227 (595)
+..+++.++|+...+++..... .+.. ..+..++++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~ 156 (451)
T cd07103 80 VDYAASFLEWFAEEARRIYGRT-IPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEET 156 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcc-cccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccC
Confidence 9999999999988876654321 1111 124567899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcce
Q 007627 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304 (595)
Q Consensus 228 p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p 304 (595)
|.++..+.++++ ++|+|+|++|+|+|++ +.++.|++ ++|.|+||||+.+|+.|++.++++++|+++|+|||||
T Consensus 157 ~~~~~~l~~~l~----~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~ 232 (451)
T cd07103 157 PLSALALAELAE----EAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAP 232 (451)
T ss_pred cHHHHHHHHHHH----HcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCe
Confidence 999998887765 6899999999999965 66788886 8999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHH
Q 007627 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384 (595)
Q Consensus 305 ~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~ 384 (595)
+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++++
T Consensus 233 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~ 312 (451)
T cd07103 233 FIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVE 312 (451)
T ss_pred EEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeE
Q 007627 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 464 (595)
Q Consensus 385 ~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~as 464 (595)
+++++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 313 ~~i~~a~~~ga~~l~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 388 (451)
T cd07103 313 ALVEDAVAKGAKVLTGGKRL----GLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAY 388 (451)
T ss_pred HHHHHHHHCCCEEEeCCCcC----CCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEE
Confidence 99999999999999999742 23689999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 465 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 465 Vft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+++|++|+++||+.|++.
T Consensus 389 i~t~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 389 VFTRDLARAWRVAEALEAGMVGINTGLIS--DAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred EECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999998643 345899999999999999999999999999974
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-91 Score=756.96 Aligned_cols=427 Identities=29% Similarity=0.458 Sum_probs=395.4
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcc
Q 007627 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (595)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 169 (595)
+++++|++||..|+.++..+|.++|++++++|++++++|++++++|+||+..|+...|+..+++.++|+++++.++..+.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 58999999999999999999999999999999999999999999999999998866699999999999999887766553
Q ss_pred cccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 007627 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~ 249 (595)
....+........++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++.+++.+ ++|+
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~-----~~P~ 157 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPE-----YLDT 157 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHH-----hCCc
Confidence 22111111234568899999999999999999999999999999999999999999999999999888764 3999
Q ss_pred CcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHH-Hc
Q 007627 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL-QS 327 (595)
Q Consensus 250 g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f-~n 327 (595)
|++|+|+|+.+.++.|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++| .|
T Consensus 158 gvv~~v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~ 237 (432)
T cd07137 158 KAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCN 237 (432)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhcc
Confidence 999999997788999998 8999999999999999999999999999999999999999999999999999999999 59
Q ss_pred CCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCC
Q 007627 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 407 (595)
Q Consensus 328 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~ 407 (595)
+||.|++++|+|||++++|+|+++|++++++++.|+| ++++++|||+++.++++++++|+++++ |+++++||..
T Consensus 238 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~---- 311 (432)
T cd07137 238 NGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER---- 311 (432)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc----
Confidence 9999999999999999999999999999999999999 468899999999999999999999998 8999999973
Q ss_pred CCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeee
Q 007627 408 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487 (595)
Q Consensus 408 ~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~I 487 (595)
..+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|
T Consensus 312 -~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~i 390 (432)
T cd07137 312 -DEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTF 390 (432)
T ss_pred -CCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEE
Confidence 2368999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 488 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 488 N~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|+...+...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 391 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 391 NDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred CCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 99765444456899999999999999999999999999975
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-90 Score=752.31 Aligned_cols=430 Identities=32% Similarity=0.520 Sum_probs=395.9
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCC-hhhhhhhHHHhHHHHHHHHHHhchhhcCc
Q 007627 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT-MVDASLGEIMTTCEKITWLLSEGEKWLKP 168 (595)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~-~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~ 168 (595)
+.+++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+ ..|+..+|+..+++.++|+++++++++.+
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~ 81 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKP 81 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 36788999999999999999999999999999999999999999999986 56776679999999999999998887765
Q ss_pred ccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCC
Q 007627 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp 248 (595)
.....+....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++++ + +|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~----a-lP 156 (434)
T cd07133 82 SRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAE----Y-FD 156 (434)
T ss_pred cccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----h-CC
Confidence 533222212234578999999999999999999999999999999999999999999999999988888765 3 89
Q ss_pred CCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHc
Q 007627 249 ENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327 (595)
Q Consensus 249 ~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n 327 (595)
+|++|+|+|+.+.++.|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|+|++.|++.+++++|.|
T Consensus 157 ~g~~~~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 157 EDEVAVVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred cCeEEEEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 9999999997788888888 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCC
Q 007627 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 407 (595)
Q Consensus 328 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~ 407 (595)
+||.|++++|||||++++|+|+++|+++++++++|+ .+++++||++++.++++++++|++++++|+++++||....
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-- 312 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGE-- 312 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCc--
Confidence 999999999999999999999999999999999886 4677999999999999999999999999999999987421
Q ss_pred CCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeee
Q 007627 408 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487 (595)
Q Consensus 408 ~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~I 487 (595)
...+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 313 ~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~i 392 (434)
T cd07133 313 DFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTI 392 (434)
T ss_pred CCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 11368999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 488 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 488 N~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|+...+...+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 393 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 393 NDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 99765555556999999999999999999999999999974
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-91 Score=753.52 Aligned_cols=432 Identities=28% Similarity=0.466 Sum_probs=400.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhc
Q 007627 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 162 (595)
Q Consensus 83 ~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 162 (595)
++.+|+++++++|++||+.|++++..+|.++|+++++.|++|+++|++++++|+||+..|+...|+..+++.++|+++.+
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999986579999999999999988
Q ss_pred hhhcCcccccCCc-ccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 007627 163 EKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (595)
Q Consensus 163 ~~~~~~~~~~~~~-~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~ 241 (595)
+++...+...... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~- 160 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK- 160 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence 8765443322211 11234678999999999999999999999999999999999999999999999999888888764
Q ss_pred HHhcCCCCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHH
Q 007627 242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 320 (595)
Q Consensus 242 l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i 320 (595)
|+|+|++|+|+|+++....|+. .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+
T Consensus 161 ----~lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i 236 (436)
T cd07135 161 ----YLDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRI 236 (436)
T ss_pred ----hCCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHH
Confidence 6999999999997765667887 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeec
Q 007627 321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (595)
Q Consensus 321 ~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~g 400 (595)
++++|.|+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||+++..+++++.++++++ |+++++|
T Consensus 237 ~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~g 312 (436)
T cd07135 237 LWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIG 312 (436)
T ss_pred HHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEEC
Confidence 99999999999999999999999999999999999999999999 8899999999999999999999987 8899999
Q ss_pred CCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh
Q 007627 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (595)
Q Consensus 401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l 480 (595)
|.. ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 313 g~~-----~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l 387 (436)
T cd07135 313 GEM-----DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRT 387 (436)
T ss_pred CCc-----CCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcC
Confidence 973 236899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 481 ~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
++|+|+||+...+...+.+||||+|.||+|+++|.+|+++||+.|+|.
T Consensus 388 ~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 388 RSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 999999998765544456899999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-90 Score=747.11 Aligned_cols=424 Identities=26% Similarity=0.414 Sum_probs=392.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhc
Q 007627 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL 166 (595)
Q Consensus 87 ~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~ 166 (595)
|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+|||..++. .|+..+++.++++++...++.
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~ 79 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHERT 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5889999999999999999999999999999999999999999999999999999985 699999999999998887776
Q ss_pred CcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC
Q 007627 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246 (595)
Q Consensus 167 ~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aG 246 (595)
.+...+. .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++. ++|
T Consensus 80 ~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~----~ag 151 (431)
T cd07095 80 GERATPM----AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWE----EAG 151 (431)
T ss_pred CCcccCC----CCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHH----HhC
Confidence 5433221 24567899999999999999999999999999999999999999999999999988777654 689
Q ss_pred CCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcC-CCcEeecCCCcceEEEcCCCCHHHHHHHHHHH
Q 007627 247 APENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 323 (595)
Q Consensus 247 lp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~-l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~ 323 (595)
+|+|++|+|+|+.+.++.|++ ++|.|+||||+.+|+.|++.++.+ ++|+++|||||||+||++|||++.|++.++++
T Consensus 152 ~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~ 231 (431)
T cd07095 152 LPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQS 231 (431)
T ss_pred cChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHH
Confidence 999999999997788888987 799999999999999999987754 69999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCceEEEccc-hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCC
Q 007627 324 ALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402 (595)
Q Consensus 324 ~f~n~GQ~C~a~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~ 402 (595)
+|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||.
T Consensus 232 ~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~ 311 (431)
T cd07095 232 AFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAME 311 (431)
T ss_pred HHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCC
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhcc
Q 007627 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 482 (595)
Q Consensus 403 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~ 482 (595)
.. ..+|+|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 312 ~~----~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~ 386 (431)
T cd07095 312 RL----VAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRA 386 (431)
T ss_pred cC----CCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 42 246899999999 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeE
Q 007627 483 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 526 (595)
Q Consensus 483 G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~ 526 (595)
|+|+||+.... ..+.+||||+|.||+|+++|.+|++.| ..|+
T Consensus 387 G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~-~~~~ 428 (431)
T cd07095 387 GIVNWNRPTTG-ASSTAPFGGVGLSGNHRPSAYYAADYC-AYPV 428 (431)
T ss_pred ceEEECCCCCC-CCCCCCCCCcccccCCCCChHHHHHHH-hhhh
Confidence 99999987553 334589999999999999999999954 4443
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-90 Score=748.64 Aligned_cols=426 Identities=29% Similarity=0.462 Sum_probs=392.9
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcc
Q 007627 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (595)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 169 (595)
+++++|++||+.|++++..+|.++|+++++.|++|+++|++++++|+||+..++..+|+..+++.++++++.++++....
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999999999999999999999999999999999877899999999999999988876543
Q ss_pred cccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 007627 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~ 249 (595)
.............++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+ ++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~-----~lp~ 156 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK-----YLDK 156 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-----hCCc
Confidence 22221111234678999999999999999999999999999999999999999999999999998888764 3999
Q ss_pred CcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcC
Q 007627 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (595)
Q Consensus 250 g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~ 328 (595)
|++|+++|+++.+..|+. ++|.|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+
T Consensus 157 gv~~vv~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~ 236 (443)
T cd07132 157 ECYPVVLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236 (443)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcC
Confidence 999999998777778888 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCC
Q 007627 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408 (595)
Q Consensus 329 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~ 408 (595)
||.|++++|||||++++|+|+++|.+++++++.|++ ++++++|||+++++++++++++++ +++++||..
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~----- 305 (443)
T cd07132 237 GQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQT----- 305 (443)
T ss_pred CCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCcc-----
Confidence 999999999999999999999999999999998887 678899999999999999999873 589999873
Q ss_pred CCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeec
Q 007627 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488 (595)
Q Consensus 409 ~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN 488 (595)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN 385 (443)
T cd07132 306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385 (443)
T ss_pred CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 23688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEcc
Q 007627 489 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 489 ~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
++..+...+.+||||+|+||+|+++|.+|+++||+.|++..+.
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 386 DTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred CcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence 8765544456899999999999999999999999999998764
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-89 Score=747.83 Aligned_cols=446 Identities=20% Similarity=0.256 Sum_probs=394.3
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHH--hhcCHHHH----HHHHHHHHHHHHHh
Q 007627 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVW--AKSSFKQR----RQFLRILLKYIIEH 124 (595)
Q Consensus 51 ~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W--~~~~~~~R----~~~L~~l~~~l~~~ 124 (595)
+||+|+|+.+ +++++++||+||+++++++.++.+|+++|+++|++||+.| ..++..+| .++|+++++.|.++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 4789999875 4679999999999999999999999999999999999998 55779999 89999999999999
Q ss_pred --HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCccc-ccCCcccccccceEEEecceEEEEEcCcchh
Q 007627 125 --QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201 (595)
Q Consensus 125 --~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P 201 (595)
.++|++++++|+||+..++ .+|+..+++.++|+++..++...... .+. ...+..++++++|+|||++|+|||||
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~--~~~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQA-LGEVVVTRKFLENFAGDQVRFLARSFNVPG--DHQGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCC--CCCCceeEEEEecceEEEEECCCchH
Confidence 5999999999999999998 57999999999999988776543221 111 12245678999999999999999999
Q ss_pred hHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChh
Q 007627 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPG 279 (595)
Q Consensus 202 ~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~ 279 (595)
+.+.++++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|+++.+..++. ++|+|+||||++
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~----~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~ 231 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLH----LCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSK 231 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHH----HhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHH
Confidence 99999999999999999999999999999998877755 689999999999997655566665 999999999999
Q ss_pred HHHHHHHHhhcCCCcEeecCCCcceEEEcCCC-CHHHHHHHHHHHHHHcCCCCCCCCceEEEccch-HHHHHHHHHHHHH
Q 007627 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVK 357 (595)
Q Consensus 280 ~g~~v~~~aa~~l~pv~lElGGk~p~IV~~da-Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v-~d~f~~~L~~~~~ 357 (595)
+|+.|+..++ +++++|+|||||+||++|| |++.|++.+++|+|.|+||.|++++|||||+++ +|+|+++|++.++
T Consensus 232 vGr~i~~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~ 308 (489)
T cd07126 232 VAERLALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAE 308 (489)
T ss_pred HHHHHHHHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHH
Confidence 9999998877 5799999999999999999 999999999999999999999999999999995 6999999999999
Q ss_pred hccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCC-cccCCeeeec------CCCCCcc
Q 007627 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVD-QYFPPTVIVN------VNHTMKL 429 (595)
Q Consensus 358 ~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~-~Ga~vl~gG~~~~~~~~~~g-~~~~PTvl~~------v~~~~~i 429 (595)
++++|+ +++|||++.. .+++.++++++++ +||++++||..........+ .|++|||+.. ++++|++
T Consensus 309 ~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i 382 (489)
T cd07126 309 QRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFEL 382 (489)
T ss_pred hcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHH
Confidence 999874 4899999998 9999999999997 99999999974211000123 3899999942 6789999
Q ss_pred cccccccCceeEEeeCC--HHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCC--eeecCCCcccccC--CCCCCC
Q 007627 430 MQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV--AAINDFASNYMCQ--SLPFGG 503 (595)
Q Consensus 430 ~~eE~FGPVl~v~~~~~--~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~--v~IN~~~~~~~~~--~~PfGG 503 (595)
++||+||||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||+..+....+ .+||||
T Consensus 383 ~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg 462 (489)
T cd07126 383 VTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGD 462 (489)
T ss_pred HhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCC
Confidence 99999999999999999 99999999999999999999999999999999999999 6699875554321 289999
Q ss_pred cCCCCCCCCCc
Q 007627 504 VKDSGFGRFAG 514 (595)
Q Consensus 504 ~~~SG~G~~~G 514 (595)
+|+||+|+.+.
T Consensus 463 ~k~sg~g~~~~ 473 (489)
T cd07126 463 PRGAGIGTPEA 473 (489)
T ss_pred CcccCCCCHhH
Confidence 99999998754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-89 Score=742.14 Aligned_cols=429 Identities=31% Similarity=0.526 Sum_probs=398.8
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcc
Q 007627 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (595)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 169 (595)
+++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+..|+..+|+..+++.+++++.+..++....
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999999999999999999999999999999999876799999999999998877666543
Q ss_pred cccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 007627 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~ 249 (595)
..+.+..+.+...++.|+|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++.+++++ + +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~----a-~p~ 156 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE----A-FDE 156 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH----h-CCc
Confidence 33222222345678999999999999999999999999999999999999999999999999888887764 4 899
Q ss_pred CcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcC
Q 007627 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (595)
Q Consensus 250 g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~ 328 (595)
|++++++|+.+.+..|++ .+|.|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+
T Consensus 157 g~v~~v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~ 236 (433)
T cd07134 157 DEVAVFEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNA 236 (433)
T ss_pred CEEEEEeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCc
Confidence 999999998788999998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCC-CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCC
Q 007627 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 407 (595)
Q Consensus 329 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~-~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~ 407 (595)
||.|++++|||||++++|+|+++|++++++++.|+| .++++++||++++.++++++++|++++++|+++++||..
T Consensus 237 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~---- 312 (433)
T cd07134 237 GQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF---- 312 (433)
T ss_pred CCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc----
Confidence 999999999999999999999999999999988886 778889999999999999999999999999999999973
Q ss_pred CCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeee
Q 007627 408 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 487 (595)
Q Consensus 408 ~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~I 487 (595)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|
T Consensus 313 -~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~i 391 (433)
T cd07134 313 -DAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVV 391 (433)
T ss_pred -CCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEE
Confidence 2358999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 488 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 488 N~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|+.......+.+||||+|.||+|+++|.+|+++||+.|++.
T Consensus 392 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 392 NDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 99765554556899999999999999999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-89 Score=741.31 Aligned_cols=425 Identities=32% Similarity=0.475 Sum_probs=391.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhc
Q 007627 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL 166 (595)
Q Consensus 87 ~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~ 166 (595)
|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+..++ ..|+..+++.++++++..+++.
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~~~ 79 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWA-GFNVDLAAGMLREAASLITQII 79 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 588999999999999999999999999999999999999999999999999998777 4699999999999998877652
Q ss_pred CcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC
Q 007627 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246 (595)
Q Consensus 167 ~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aG 246 (595)
. ...+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++ .++|
T Consensus 80 ~-~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~----~~aG 152 (432)
T cd07105 80 G-GSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVF----HEAG 152 (432)
T ss_pred C-eecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHH----HHcC
Confidence 2 222221 12345688999999999999999999999999999999999999999999999998877765 4689
Q ss_pred CCCCcEEeeeCCh----hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHH
Q 007627 247 APENLVDVITGFA----ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 320 (595)
Q Consensus 247 lp~g~v~vv~g~~----~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i 320 (595)
+|+|++|+|+|+. +.++.|++ ++|.|+||||+.+|+.|+++|+++++|+++|||||||+||++|+|++.|++.+
T Consensus 153 lP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i 232 (432)
T cd07105 153 LPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAA 232 (432)
T ss_pred cCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHH
Confidence 9999999999853 46788887 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeec
Q 007627 321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (595)
Q Consensus 321 ~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~g 400 (595)
++++|.|+||.|++++|||||+++||+|+++|+++++++++| ++++||++++.++++++++|++++++|+++++|
T Consensus 233 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~g 307 (432)
T cd07105 233 LFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVG 307 (432)
T ss_pred HHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 999999999999999999999999999999999999999988 569999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh
Q 007627 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (595)
Q Consensus 401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l 480 (595)
|.... ...|.|++|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++
T Consensus 308 g~~~~---~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l 384 (432)
T cd07105 308 GLADE---SPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRI 384 (432)
T ss_pred CCcCC---CCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 97421 136899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 481 ~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
++|+|+||++..+. .+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 385 ~~g~v~vN~~~~~~-~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 385 ESGAVHINGMTVHD-EPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CcCeEEECCCCCCC-CCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence 99999999976543 346999999999999999999999999999985
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-88 Score=738.23 Aligned_cols=426 Identities=33% Similarity=0.513 Sum_probs=395.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhc
Q 007627 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL 166 (595)
Q Consensus 87 ~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~ 166 (595)
|++++++.|++||+.|++++..+|.++|+++++.|.+++++|++++++|+||+..++. .|+..+++.+++++....+..
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRRPE 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999999999999999999999884 699999999999988766542
Q ss_pred CcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHH-HHHHHHHHHHHHhc
Q 007627 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAV 245 (595)
Q Consensus 167 ~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~-~~l~~~~~~~l~~a 245 (595)
. +..+.. ..+..++++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++ ..+ .++|.++
T Consensus 80 ~-~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l----~~~l~~a 152 (431)
T cd07104 80 G-EILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLI----AEIFEEA 152 (431)
T ss_pred C-ccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHH----HHHHHHc
Confidence 2 111111 1245678999999999999999999999999999999999999999999999884 344 4456679
Q ss_pred CCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHH
Q 007627 246 GAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322 (595)
Q Consensus 246 Glp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~ 322 (595)
|+|+|++|+++|+. +.++.|++ ++|.|+||||+.+|+.|+++++++++|+++|||||||+||++|||++.|++.+++
T Consensus 153 GlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~ 232 (431)
T cd07104 153 GLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAF 232 (431)
T ss_pred CCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHH
Confidence 99999999999976 57888987 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCC
Q 007627 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402 (595)
Q Consensus 323 ~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~ 402 (595)
++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.
T Consensus 233 ~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~ 312 (431)
T cd07104 233 GAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGT 312 (431)
T ss_pred HHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhcc
Q 007627 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 482 (595)
Q Consensus 403 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~ 482 (595)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 313 -------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~ 385 (431)
T cd07104 313 -------YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLET 385 (431)
T ss_pred -------CCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCc
Confidence 2588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 483 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 483 G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|+|+||++..+. .+.+||||+|.||+|+++|++|+++||+.|++.
T Consensus 386 g~v~iN~~~~~~-~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 386 GMVHINDQTVND-EPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CeEEECCCCCCC-CCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 999999987654 456999999999999999999999999999974
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-88 Score=728.71 Aligned_cols=402 Identities=30% Similarity=0.470 Sum_probs=371.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEE
Q 007627 114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193 (595)
Q Consensus 114 L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~ 193 (595)
|++++++|++|+++|++++++|+||+..|+. +|+..+++.++|+++.++.+.... .+.. ..+...++.++|+|||+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~ 76 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEI-IQSD--RPGENILLFKRALGVTT 76 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cCCC--CCCceeEEEEecccEEE
Confidence 5789999999999999999999999999995 699999999999998877654321 1111 12345788999999999
Q ss_pred EEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCC
Q 007627 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVD 270 (595)
Q Consensus 194 ~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd 270 (595)
+|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++. ++|+|+|++|+|+|++ +.++.|++ ++|
T Consensus 77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~l~~~~~v~ 152 (409)
T PRK10090 77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVD----EIGLPKGVFNLVLGRGETVGQELAGNPKVA 152 (409)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH----HcCCCcccEEEEeCCChhHHHHHhcCCCcC
Confidence 9999999999999999999999999999999999999998877765 6899999999999954 67888887 999
Q ss_pred EEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHH
Q 007627 271 KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 350 (595)
Q Consensus 271 ~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~ 350 (595)
+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 153 ~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~ 232 (409)
T PRK10090 153 MVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 232 (409)
T ss_pred EEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCC-CCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcc
Q 007627 351 QVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429 (595)
Q Consensus 351 ~L~~~~~~l~~G~~~~~-~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i 429 (595)
+|+++++++++|+|.++ ++++|||+++.++++++++|++++++|+++++||.+. ...|+|++|||+.+++++|++
T Consensus 233 ~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i 308 (409)
T PRK10090 233 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAV----EGKGYYYPPTLLLDVRQEMSI 308 (409)
T ss_pred HHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEecEEEeCCCCCCHH
Confidence 99999999999999987 8999999999999999999999999999999999742 235889999999999999999
Q ss_pred cccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCC
Q 007627 430 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF 509 (595)
Q Consensus 430 ~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~ 509 (595)
++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+...... ..||||+|+||+
T Consensus 309 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~--~~pfGG~k~SG~ 386 (409)
T PRK10090 309 MHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAM--QGFHAGWRKSGI 386 (409)
T ss_pred HhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCC--CCCcCCcccccC
Confidence 999999999999999999999999999999999999999999999999999999999999765542 379999999999
Q ss_pred CCCCcHHHHhccceeeEEEE
Q 007627 510 GRFAGVEGLRACCLVKSVVE 529 (595)
Q Consensus 510 G~~~G~~gl~~~t~~k~v~~ 529 (595)
|+++|.+||++||+.|++..
T Consensus 387 G~~~g~~gl~~f~~~k~v~~ 406 (409)
T PRK10090 387 GGADGKHGLHEYLQTQVVYL 406 (409)
T ss_pred CccchHHHHHHhcceEEEEE
Confidence 99999999999999999865
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-88 Score=786.57 Aligned_cols=457 Identities=22% Similarity=0.388 Sum_probs=420.6
Q ss_pred CCCeEEeecCCCCc-EEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh
Q 007627 62 SETKVQCYEPATMK-YLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (595)
Q Consensus 62 ~~~~~~~~~P~tg~-~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~ 140 (595)
++..++++||+|++ ++++++.++.+|+++|+++|++||+.|+++|+++|.++|++++++|++++++|++++++|+||+.
T Consensus 560 ~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~ 639 (1038)
T PRK11904 560 EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTL 639 (1038)
T ss_pred CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 46679999999988 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhHHHHHHHHHHhchhhcC-cccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEE
Q 007627 141 VDASLGEIMTTCEKITWLLSEGEKWLK-PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGI 219 (595)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~V 219 (595)
.++ ..|+..+++.++|++..++++.. +...+.+ .+..+++.++|+|||++|+|||||+.++++++++||++||+|
T Consensus 640 ~~a-~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~---~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtV 715 (1038)
T PRK11904 640 QDA-IAEVREAVDFCRYYAAQARRLFGAPEKLPGP---TGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTV 715 (1038)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhhCCCcccCCC---CCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEE
Confidence 998 57999999999999999887653 2222221 246788999999999999999999999999999999999999
Q ss_pred EEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcC---CC
Q 007627 220 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LT 293 (595)
Q Consensus 220 VlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~---l~ 293 (595)
|+|||+++|+++..+.+++. ++|+|+|++|+|+|++ +.++.|++ +++.|+||||+.+|+.|.+.++++ ++
T Consensus 716 IlKPse~tpl~a~~l~~ll~----eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~ 791 (1038)
T PRK11904 716 IAKPAEQTPLIAAEAVKLLH----EAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIV 791 (1038)
T ss_pred EeeCCCcCHHHHHHHHHHHH----HhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCc
Confidence 99999999999998887655 6899999999999977 57899997 899999999999999999998865 78
Q ss_pred cEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCccc
Q 007627 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373 (595)
Q Consensus 294 pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~ 373 (595)
|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+.++++||
T Consensus 792 pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GP 871 (1038)
T PRK11904 792 PLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGP 871 (1038)
T ss_pred eEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC--CHHHHH
Q 007627 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVV 451 (595)
Q Consensus 374 li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~--~~~eAi 451 (595)
+|++.++++++++|+++++ |+++++||.... ....|+|++|||+.. +++.+++||+||||++|++|+ ++||||
T Consensus 872 vI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~--~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI 946 (1038)
T PRK11904 872 VIDAEAKANLDAHIERMKR-EARLLAQLPLPA--GTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVI 946 (1038)
T ss_pred CCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCC--CCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHH
Confidence 9999999999999999876 899999987421 113599999999963 678899999999999999997 699999
Q ss_pred HHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceeeEEEEc
Q 007627 452 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 452 ~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k~v~~~ 530 (595)
+++|+++|||+++|||+|.+.++++++++++|+|+||+..+.......||||+|.||+| +.+|+++|+.|++.|+|+.+
T Consensus 947 ~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~ 1026 (1038)
T PRK11904 947 DAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVN 1026 (1038)
T ss_pred HHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEc
Confidence 99999999999999999999999999999999999999766554455799999999999 67899999999999999875
Q ss_pred c
Q 007627 531 R 531 (595)
Q Consensus 531 ~ 531 (595)
.
T Consensus 1027 ~ 1027 (1038)
T PRK11904 1027 T 1027 (1038)
T ss_pred c
Confidence 4
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-86 Score=718.76 Aligned_cols=423 Identities=32% Similarity=0.498 Sum_probs=387.9
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcc
Q 007627 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE 169 (595)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~ 169 (595)
+++++|++||..|+++|..+|.++|++++++|++++++|++++++|+||+..++...|+..+++.++++++.++++..+.
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 48899999999999999999999999999999999999999999999999888766799999999999998887765443
Q ss_pred cccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCC
Q 007627 170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249 (595)
Q Consensus 170 ~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~ 249 (595)
.........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++.+++.+ |+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-----~~P~ 156 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-----YFDP 156 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-----hCCC
Confidence 22111111234678899999999999999999999999999999999999999999999999888887764 6999
Q ss_pred CcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcC
Q 007627 250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (595)
Q Consensus 250 g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~ 328 (595)
|++|+++|+.+.+..|++ .+|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 157 gv~~vv~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~ 236 (426)
T cd07087 157 EAVAVVEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNA 236 (426)
T ss_pred CEEEEEeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhcc
Confidence 999999998788888998 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCC
Q 007627 329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408 (595)
Q Consensus 329 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~ 408 (595)
||.|++++|||||++++|+|+++|++++++++.|+| ++++++||++++.++++++++++++ ++++||..
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~----- 305 (426)
T cd07087 237 GQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV----- 305 (426)
T ss_pred CCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-----
Confidence 999999999999999999999999999999986665 4688999999999999999999865 79999873
Q ss_pred CCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeec
Q 007627 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 488 (595)
Q Consensus 409 ~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN 488 (595)
..+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 306 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN 385 (426)
T cd07087 306 DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVN 385 (426)
T ss_pred CCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEEC
Confidence 23689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 489 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 489 ~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+.......+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 386 DVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 8765444456899999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-85 Score=771.82 Aligned_cols=442 Identities=22% Similarity=0.382 Sum_probs=408.9
Q ss_pred CCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh
Q 007627 62 SETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (595)
Q Consensus 62 ~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~ 140 (595)
.+..++++||+| ++++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++|+++|+.++++|+||+.
T Consensus 657 ~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~ 736 (1318)
T PRK11809 657 AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTF 736 (1318)
T ss_pred CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCH
Confidence 356789999999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEE
Q 007627 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220 (595)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VV 220 (595)
.++ ..|+..+++.++|++..+++.+ ..+.++|+|||++|+|||||+.++++++++||++||+||
T Consensus 737 ~~A-~~EV~eaidflryyA~~a~~~~---------------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV 800 (1318)
T PRK11809 737 SNA-IAEVREAVDFLRYYAGQVRDDF---------------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVL 800 (1318)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhc---------------CCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEE
Confidence 998 5799999999999998765421 124689999999999999999999999999999999999
Q ss_pred EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCC-----
Q 007627 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL----- 292 (595)
Q Consensus 221 lKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l----- 292 (595)
+|||++||+++..+++++. ++|+|+|++|+|+|++ +.++.|++ +|+.|+||||+++|+.|++.+++++
T Consensus 801 ~KPseqTpl~a~~lv~ll~----eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~ 876 (1318)
T PRK11809 801 AKPAEQTPLIAAQAVRILL----EAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGR 876 (1318)
T ss_pred EeCCCCcHHHHHHHHHHHH----HhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccC
Confidence 9999999999998888765 6899999999999976 56899997 9999999999999999999999876
Q ss_pred -CcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCc
Q 007627 293 -TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371 (595)
Q Consensus 293 -~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~ 371 (595)
+|+++|+|||||+||++|||+|.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+.++++
T Consensus 877 ~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdv 956 (1318)
T PRK11809 877 PIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDI 956 (1318)
T ss_pred ceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC--CHHH
Q 007627 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEE 449 (595)
Q Consensus 372 G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~--~~~e 449 (595)
||+|++.++++++++|++++++|++++.||.... .....|+|++|||+.. +++.+++||+||||++|++|+ ++||
T Consensus 957 GPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~-~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~lde 1033 (1318)
T PRK11809 957 GPVIDAEAKANIERHIQAMRAKGRPVFQAARENS-EDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDE 1033 (1318)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCC-CCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHH
Confidence 9999999999999999999999999998876321 0114699999999974 678899999999999999996 7999
Q ss_pred HHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceeeE
Q 007627 450 VVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKS 526 (595)
Q Consensus 450 Ai~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k~ 526 (595)
||+++|+++|||+++|||+|.++++++++++++|+|+||+..+....+..||||+|.||+| +.+|+++|+.|+..+.
T Consensus 1034 aI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1034 LIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred HHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 9999999999999999999999999999999999999998765544445799999999999 5799999999998874
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-84 Score=765.45 Aligned_cols=443 Identities=22% Similarity=0.373 Sum_probs=411.5
Q ss_pred CCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChh
Q 007627 63 ETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (595)
Q Consensus 63 ~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ 141 (595)
+..++++||+| ++++++++.++.+++++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+||+..
T Consensus 566 ~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ 645 (1208)
T PRK11905 566 GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLA 645 (1208)
T ss_pred CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 45789999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEE
Q 007627 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (595)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVl 221 (595)
++ ..|+..+++.++|++..+++... ...++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 646 ea-~~Ev~eaid~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~ 709 (1208)
T PRK11905 646 NA-IAEVREAVDFLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLA 709 (1208)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEE
Confidence 98 57999999999999988765321 135689999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCC---CcE
Q 007627 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL---TPV 295 (595)
Q Consensus 222 Kps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l---~pv 295 (595)
|||+++|+++..+++++. ++|+|+|++|+|+|++ +.++.|++ +|+.|+||||+.+|+.|.+.+++++ +|+
T Consensus 710 KPse~tpl~a~~l~~ll~----eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pl 785 (1208)
T PRK11905 710 KPAEQTPLIAARAVRLLH----EAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPL 785 (1208)
T ss_pred eCCcccHHHHHHHHHHHH----HcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeE
Confidence 999999999998887765 6899999999999977 58999997 9999999999999999999998764 999
Q ss_pred eecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCccccc
Q 007627 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 375 (595)
Q Consensus 296 ~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li 375 (595)
++|+|||||+||++|||+|.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+.++++||+|
T Consensus 786 i~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvI 865 (1208)
T PRK11905 786 IAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVI 865 (1208)
T ss_pred EEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC--CHHHHHHH
Q 007627 376 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKL 453 (595)
Q Consensus 376 ~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~--~~~eAi~~ 453 (595)
++.++++++++|++++++|+.++.||... ....|+|++|||+. + ++|.+++||+||||++|++|+ ++||||++
T Consensus 866 d~~a~~~i~~~I~~a~~~G~~l~~g~~~~---~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~ 940 (1208)
T PRK11905 866 DAEAQANIEAHIEAMRAAGRLVHQLPLPA---ETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDD 940 (1208)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEccCCC---CCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHH
Confidence 99999999999999999999888776421 11469999999997 3 678999999999999999997 69999999
Q ss_pred hhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceeeEEEEc
Q 007627 454 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 454 aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k~v~~~ 530 (595)
+|+++|||+++|||+|.+.++++++++++|+|+||+..+....+..||||+|.||+| +.+|+++|+.|++.|+++.+
T Consensus 941 iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 941 INATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred HhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeecc
Confidence 999999999999999999999999999999999999766554455799999999999 58999999999999998754
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-83 Score=698.06 Aligned_cols=421 Identities=21% Similarity=0.277 Sum_probs=377.5
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchh--h
Q 007627 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--W 165 (595)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~--~ 165 (595)
+++|+++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+..++. +|+..+++.++++++.+++ +
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~ 79 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW 79 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999999999999999999999998874 7999999999999987664 2
Q ss_pred cCcccc---cCCcccccccceEEEecceEEEEEcCcchhhHh--hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHH
Q 007627 166 LKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN--IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240 (595)
Q Consensus 166 ~~~~~~---~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~--~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~ 240 (595)
...... +......+...++.++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|+++.++.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~ 159 (454)
T cd07129 80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA 159 (454)
T ss_pred ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 211100 000001123457899999999999999999987 558999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhc--CCCcEeecCCCcceEEEcCCC---C
Q 007627 241 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--TLTPVTLELGGKDAFIVCDDV---D 312 (595)
Q Consensus 241 ~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~--~l~pv~lElGGk~p~IV~~da---D 312 (595)
+|.++|+|+|+||+|+|++ +.+++|++ ++|.|+||||+.+|+.|++.+++ +++|+++|||||||+||++|+ |
T Consensus 160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~d 239 (454)
T cd07129 160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAER 239 (454)
T ss_pred HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHH
Confidence 9999999999999999965 78899998 89999999999999999999998 799999999999999999999 8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCceEEEccc-hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Q 007627 313 VPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 391 (595)
Q Consensus 313 l~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~ 391 (595)
++.|++.+++|+|.|+||.|++++|||||++ ++|+|+++|+++++++++| +++++.+.++..+.|++++
T Consensus 240 l~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~ 309 (454)
T cd07129 240 GEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALA 309 (454)
T ss_pred HHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999998754 5667777788888899999
Q ss_pred hc-CCeEeecCCCCCCCCCCCCcccCCeeeecCC---CCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEec
Q 007627 392 DK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVN---HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467 (595)
Q Consensus 392 ~~-Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~---~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft 467 (595)
++ |+++++||.. ..+|+|++|||+.+.+ ++|++++||+||||++|++|+|.||||+++|+++|||++||||
T Consensus 310 ~~~ga~~l~gg~~-----~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft 384 (454)
T cd07129 310 AAPGVRVLAGGAA-----AEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHG 384 (454)
T ss_pred hcCCcEEEeCCCc-----CCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEc
Confidence 88 9999999973 2468999999998665 6999999999999999999999999999999999999999999
Q ss_pred Cc--HHHHHHHHHHh--ccCCeeecCCCccccc-CCCCCCC-cCCCCCCCC--CcHHHHhcccee
Q 007627 468 GS--QHRAREIAAQI--QCGVAAINDFASNYMC-QSLPFGG-VKDSGFGRF--AGVEGLRACCLV 524 (595)
Q Consensus 468 ~d--~~~~~~~~~~l--~~G~v~IN~~~~~~~~-~~~PfGG-~~~SG~G~~--~G~~gl~~~t~~ 524 (595)
+| .+++++++++| ++|+|+||++...... +.+|||| +|.||+||+ +|.+++++||++
T Consensus 385 ~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 385 EEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred cCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 99 79999999999 6999999986544321 3589999 999999999 799999999976
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-82 Score=696.12 Aligned_cols=443 Identities=19% Similarity=0.226 Sum_probs=384.7
Q ss_pred ecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhh-h-
Q 007627 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-G- 146 (595)
Q Consensus 69 ~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~-~- 146 (595)
+||+||+++++++.++. ++++++|++||+.|+++++.+|.++|++++++|.+|.++|++++++|+||+..++.. +
T Consensus 70 ~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gk 146 (551)
T TIGR02288 70 RSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGG 146 (551)
T ss_pred cCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccC
Confidence 69999999999999985 899999999999999999999999999999999999999999999999999988731 2
Q ss_pred --HHHhHHHHHHHHHHhchhhcC------cccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCE
Q 007627 147 --EIMTTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 218 (595)
Q Consensus 147 --Ei~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~ 218 (595)
++...++.++|++....+... ++...... ....++.++|+|||++|+|||||+++.++++++||++||+
T Consensus 147 p~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~ 223 (551)
T TIGR02288 147 PHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPL---KLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNP 223 (551)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcc---cccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCe
Confidence 677889999998887655432 22111111 1123468999999999999999999999999999999999
Q ss_pred EEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC--hhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCc
Q 007627 219 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF--AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294 (595)
Q Consensus 219 VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~--~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~p 294 (595)
||+|||+.+|+++.++.+++.++|.++|+|+|+||+|+|+ .+.++.|+. +++.|.||||+.+|+.|++.++ .++
T Consensus 224 VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~ 301 (551)
T TIGR02288 224 VLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQ 301 (551)
T ss_pred EEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCc
Confidence 9999999999999888888888999999999999999985 367899987 8999999999999999999887 489
Q ss_pred EeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccc---------hHHHHHHHHHHHHHhccCCCCC
Q 007627 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 295 v~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~---------v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+++|||||||+||++|+|++.+++.+++|+|.|+||.|++++|||||++ +||+|+++|+++++++ +|+|.
T Consensus 302 v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~ 380 (551)
T TIGR02288 302 VYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPA 380 (551)
T ss_pred EEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcc
Confidence 9999999999999999999999999999999999999999999999999 7999999999999999 99999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++||||++.+++++ ++++++| ++++||....++..+.++|++|||+...+++|++++||+||||++|++|+
T Consensus 381 ~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~ 455 (551)
T TIGR02288 381 RATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVD 455 (551)
T ss_pred cccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEEC
Confidence 989999999999999995 5667788 66777764332222334689999995333599999999999999999999
Q ss_pred CHHHHHHHhhcC--CCC-ceeEEecCcHHHHHHHHHHh--ccCCeeecCCCcccccCCCCCCCcCCCCCCCCC-cHHHHh
Q 007627 446 TDEEVVKLANDS--RYG-LGCAVFSGSQHRAREIAAQI--QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFA-GVEGLR 519 (595)
Q Consensus 446 ~~~eAi~~aN~~--~~g-L~asVft~d~~~~~~~~~~l--~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~-G~~gl~ 519 (595)
|.||||+++|++ +|| |++||||+|.++++++.+++ ..|+++||+.+..+.++..||++.+.||..--. ....--
T Consensus 456 d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~~sg~n~~a~~~~~~~ 535 (551)
T TIGR02288 456 DGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFHGTGGNPAANASLSDG 535 (551)
T ss_pred CHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCCCCCCCCccCCcccch
Confidence 999999999998 566 99999999999999999998 688888888877777777899999999976443 344444
Q ss_pred ccceee
Q 007627 520 ACCLVK 525 (595)
Q Consensus 520 ~~t~~k 525 (595)
.|...|
T Consensus 536 ~~~~~r 541 (551)
T TIGR02288 536 AFVANR 541 (551)
T ss_pred hhhhcc
Confidence 454444
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-82 Score=692.20 Aligned_cols=453 Identities=19% Similarity=0.212 Sum_probs=397.9
Q ss_pred CCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCC
Q 007627 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 139 (595)
Q Consensus 60 ~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~ 139 (595)
+.++....++||+|++.+++++.+ |++++|++|++||+.|+++++.+|.++|++++++|.+++++|++++++|+||+
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~ 137 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQA 137 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCC
Confidence 345678999999999999999987 89999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhh----hHHHhHHHHHHHHHHhchhhcC------cccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 140 MVDASL----GEIMTTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 140 ~~ea~~----~Ei~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
..++.. .|+..+++.++|+.+...+... ++.+..++. . ...+.++|+||+++|+|||||+++.+.++
T Consensus 138 ~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~-~--~k~~~~~P~GVv~vI~p~nfP~~~~~~~i 214 (549)
T cd07127 138 FMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLA-M--EKTFTVVPRGVALVIGCSTFPTWNGYPGL 214 (549)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCccccc-c--cceeEEecccEEEEEeCcCChHHHHHHHH
Confidence 987742 1799999999998887665422 211111111 1 12567899999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh--hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~--~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
++||++||+||+|||+.+|+++.++.++++++|.++|+|+|+||+|+|++ +.++.|+. .+++|+||||+.+|+.|+
T Consensus 215 ~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~ 294 (549)
T cd07127 215 FASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLE 294 (549)
T ss_pred HHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999889999999999999999999999853 67888987 999999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccc---------hHHHHHHHHHHHH
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKIV 356 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~---------v~d~f~~~L~~~~ 356 (595)
+.++ .+|+++|||||||+||++|+|++.+++.+++|+|.|+||.|++++|||||++ +||+|++.|++++
T Consensus 295 ~~a~--~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~ 372 (549)
T cd07127 295 ANAR--QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI 372 (549)
T ss_pred HHhc--cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence 9988 4799999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred HhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCccccccccc
Q 007627 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 436 (595)
Q Consensus 357 ~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FG 436 (595)
+++ +|+|.+..+++||||++++++++++ +++.|+ +++||....+|..++++|++|||+.+++++|++++||+||
T Consensus 373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FG 446 (549)
T cd07127 373 DGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFG 446 (549)
T ss_pred HHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcC
Confidence 999 8999989999999999999999865 555665 7788875433333344567999999888999999999999
Q ss_pred CceeEEeeCCHHHHHHHhhcCC--C-CceeEEecCcHHHHHHHHHHh-ccC-CeeecCCCcccccCCCCCCCcCCCCCCC
Q 007627 437 PIMPIMKFNTDEEVVKLANDSR--Y-GLGCAVFSGSQHRAREIAAQI-QCG-VAAINDFASNYMCQSLPFGGVKDSGFGR 511 (595)
Q Consensus 437 PVl~v~~~~~~~eAi~~aN~~~--~-gL~asVft~d~~~~~~~~~~l-~~G-~v~IN~~~~~~~~~~~PfGG~~~SG~G~ 511 (595)
||++|++|+|.||||+++|++. + ||++||||+|.+.++++.+++ ++| +++||+++..+.+|.+||||.+.||..-
T Consensus 447 PVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~ 526 (549)
T cd07127 447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP 526 (549)
T ss_pred ceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc
Confidence 9999999999999999999984 4 599999999999999999994 555 9999999888888878899999999874
Q ss_pred C-CcHHHHhccceeeE
Q 007627 512 F-AGVEGLRACCLVKS 526 (595)
Q Consensus 512 ~-~G~~gl~~~t~~k~ 526 (595)
- +.....-.|...|-
T Consensus 527 ~a~~~~~~~~fv~~r~ 542 (549)
T cd07127 527 AANAALTDGAFVANRF 542 (549)
T ss_pred ccccccchhhhhhcce
Confidence 4 44455555655543
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-81 Score=677.81 Aligned_cols=422 Identities=18% Similarity=0.206 Sum_probs=370.8
Q ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhc-C
Q 007627 89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL-K 167 (595)
Q Consensus 89 ~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~-~ 167 (595)
++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+. ++ ..|+..+++.++|++..+.... .
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~-~~ev~~~i~~~~~~~~~~~~~~~~ 79 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MF-AENICGDQVQLRARAFVIYSYRIP 79 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hh-hhhhcchHHHHHHHHHHHHhcccc
Confidence 6899999999999999999999999999999999999999999999999999 65 4699999999999988776431 1
Q ss_pred cccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCC
Q 007627 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247 (595)
Q Consensus 168 ~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGl 247 (595)
.+.............+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.++++ ++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~----~ag~ 155 (442)
T cd07084 80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLH----YAGL 155 (442)
T ss_pred ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHH----HhCC
Confidence 110000000012356899999999999999999999999999999999999999999999999998888766 5788
Q ss_pred -CCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCC-CHHHHHHHHHHH
Q 007627 248 -PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRA 323 (595)
Q Consensus 248 -p~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~da-Dl~~aa~~i~~~ 323 (595)
|+|++++|+|+++.+..|++ ++|.|+||||+++|+.|++.+++ +|+++|||||||+||++|| |++.+++.++++
T Consensus 156 ~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 156 LPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred CCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 99999999998778888887 89999999999999999999885 8999999999999999999 699999999999
Q ss_pred HHHcCCCCCCCCceEEEccc-hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhc-CCeEeecC
Q 007627 324 ALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILARG 401 (595)
Q Consensus 324 ~f~n~GQ~C~a~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~-Ga~vl~gG 401 (595)
+|.|+||.|++++|||||++ ++|+|+++|.++++++++| ++++||++++ ++.++|++++++ |+++++||
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg 304 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSG 304 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCC
Confidence 99999999999999999999 9999999999999999988 5689999765 455667777777 59999999
Q ss_pred CCCCCCC--CCCCcccCCeeeecCCCCC---cccccccccCceeEEeeCC--HHHHHHHhhcCCCCceeEEecCcHHHHH
Q 007627 402 SFGHLSE--GAVDQYFPPTVIVNVNHTM---KLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAR 474 (595)
Q Consensus 402 ~~~~~~~--~~~g~~~~PTvl~~v~~~~---~i~~eE~FGPVl~v~~~~~--~~eAi~~aN~~~~gL~asVft~d~~~~~ 474 (595)
.....+. ...|+|++|||+.+++++| ++++||+||||++|++|+| ++|||+++|+++|||++||||+|.++++
T Consensus 305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 384 (442)
T cd07084 305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQ 384 (442)
T ss_pred cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHH
Confidence 7432111 1258999999999999997 9999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHh-ccCCeeecCCCcccccCCCCCCC-cCCCCCCCCC-cHHHHhccceeeEE
Q 007627 475 EIAAQI-QCGVAAINDFASNYMCQSLPFGG-VKDSGFGRFA-GVEGLRACCLVKSV 527 (595)
Q Consensus 475 ~~~~~l-~~G~v~IN~~~~~~~~~~~PfGG-~~~SG~G~~~-G~~gl~~~t~~k~v 527 (595)
++++++ ++|+|+||+.++....+..|||| .|.||+|++. |.+++++||+...+
T Consensus 385 ~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 385 ELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 999999 99999999874333344467766 8899999995 99999999987653
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-81 Score=678.07 Aligned_cols=410 Identities=21% Similarity=0.292 Sum_probs=356.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchh
Q 007627 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK 164 (595)
Q Consensus 85 ~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~ 164 (595)
-+|+++++++|++||+.|+++|.++|.++|+++++.|++|.++|++++++|+||+..++. ++.++++++....
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~ 75 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPG 75 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCc
Confidence 368999999999999999999999999999999999999999999999999999987763 3455665543211
Q ss_pred h--cCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 007627 165 W--LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (595)
Q Consensus 165 ~--~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l 242 (595)
. +.+.... ......+++|+|+|||++|+|||||+.++++++++||++||+||+||||.+|+++.++.++++++|
T Consensus 76 ~~~~~~~~~~----~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~ 151 (429)
T cd07121 76 TEDLTTTAWS----GDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAI 151 (429)
T ss_pred cccccccccc----CCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHH
Confidence 1 1111000 012345788999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHH
Q 007627 243 AAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319 (595)
Q Consensus 243 ~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~ 319 (595)
.++|+|+|++|+|+|.+ +.++.|++ +||+|+||||+.+|+.|++. .+|+++|||||||+||++|||++.|++.
T Consensus 152 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~ 227 (429)
T cd07121 152 AEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARD 227 (429)
T ss_pred HHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHH
Confidence 99999999999999854 77899998 89999999999999999875 4999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhc--CCeE
Q 007627 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK--GAEI 397 (595)
Q Consensus 320 i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~--Ga~v 397 (595)
+++|+|.|+||.|++++|||||+++||+|+++|+++ + ..+++++++++++++++++++. |+++
T Consensus 228 i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga~~ 292 (429)
T cd07121 228 IVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPNKK 292 (429)
T ss_pred HHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC------C---------CEEcCHHHHHHHHHhhcccCCCcccccc
Confidence 999999999999999999999999999999999885 1 1378999999999999999864 7999
Q ss_pred eecCCCCCCCCCCCCcccC---CeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCc--eeEEecCcHHH
Q 007627 398 LARGSFGHLSEGAVDQYFP---PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL--GCAVFSGSQHR 472 (595)
Q Consensus 398 l~gG~~~~~~~~~~g~~~~---PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL--~asVft~d~~~ 472 (595)
+.||.... .....|.|++ |||+++++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.++
T Consensus 293 ~~gg~~~~-~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~ 371 (429)
T cd07121 293 WVGKDASK-ILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN 371 (429)
T ss_pred ccCcCHHH-HHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHH
Confidence 99886310 0012477877 499999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEcc
Q 007627 473 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 473 ~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
++++++++++|+|+||+... ..+||||+|.|++- -+|++| +.+|..|+++..|
T Consensus 372 a~~~a~~l~aG~v~iN~~~~----~~~p~gG~k~s~~~-~~~~~~-~~~~~~~~~~~~~ 424 (429)
T cd07121 372 LTKMARAMQTTIFVKNGPSY----AGLGVGGEGYTTFT-IAGPTG-EGLTSARTFTRRR 424 (429)
T ss_pred HHHHHhhCCceEEEEcCCCc----CccccCCCccceEE-ecCCcC-cCccChhhhheee
Confidence 99999999999999997633 34899999999881 124445 6668888876544
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-80 Score=672.35 Aligned_cols=428 Identities=36% Similarity=0.582 Sum_probs=398.7
Q ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCc
Q 007627 89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168 (595)
Q Consensus 89 ~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~ 168 (595)
++++++|++|++.|++++.++|.++|+++++.|.++.++|+++++.|+||+..++ ..|+..+++.+++++...+++..+
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~-~~ei~~~i~~l~~~~~~~~~~~~~ 79 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEA-LGEVARAADTFRYYAGLARRLHGE 79 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3689999999999999999999999999999999999999999999999988766 579999999999999888887655
Q ss_pred ccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCC
Q 007627 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248 (595)
Q Consensus 169 ~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp 248 (595)
.... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+.++++ ++|+|
T Consensus 80 ~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~----~ag~p 152 (432)
T cd07078 80 VIPS---PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLA----EAGLP 152 (432)
T ss_pred cccc---cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HcCCC
Confidence 4311 1235677899999999999999999999999999999999999999999999999998888765 58999
Q ss_pred CCcEEeeeCChh-HHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHH
Q 007627 249 ENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 325 (595)
Q Consensus 249 ~g~v~vv~g~~~-~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f 325 (595)
++++++++|+.+ .+..|++ ++|.|.||||..+++.|++.++++++|+++|+|||||+||++|+|++.+++.+++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~ 232 (432)
T cd07078 153 PGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF 232 (432)
T ss_pred cCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 999999999764 7888887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCC
Q 007627 326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 405 (595)
Q Consensus 326 ~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~ 405 (595)
.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++++++|+++.++|+++++||....
T Consensus 233 ~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~ 312 (432)
T cd07078 233 GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLE 312 (432)
T ss_pred hccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987422
Q ss_pred CCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCe
Q 007627 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485 (595)
Q Consensus 406 ~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v 485 (595)
. +.|.|++|||+.++++++++++||+||||++|++|+|+||||+++|+.++||++||||+|.+.++++++++++|+|
T Consensus 313 ~---~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v 389 (432)
T cd07078 313 G---GKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTV 389 (432)
T ss_pred C---CCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceE
Confidence 1 1589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 486 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 486 ~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+||+...+ ..+.+||||.|.||+|+++|++|+++||+.|++.
T Consensus 390 ~iN~~~~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 390 WINDYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred EECCCCCC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99998776 4566999999999999999999999999999974
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-80 Score=671.74 Aligned_cols=412 Identities=21% Similarity=0.278 Sum_probs=359.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhc
Q 007627 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 162 (595)
Q Consensus 83 ~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 162 (595)
...+|+++++++|++||.+|+.++.++|.++|+++++.|++|+++|++++++|+||+..|+.. +.+++++++.
T Consensus 33 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~~ 105 (465)
T PRK15398 33 GVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEKT 105 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999988743 3445555543
Q ss_pred h--hhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHH
Q 007627 163 E--KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240 (595)
Q Consensus 163 ~--~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~ 240 (595)
. .++.++... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++++
T Consensus 106 ~~~~~~~~~~~~----~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 106 PGVEDLTTEALT----GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred ccccccccCccc----CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 2 222221111 1123467899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHH
Q 007627 241 ALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 317 (595)
Q Consensus 241 ~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa 317 (595)
+|.++|+|+|++|+|+|. .+.+++|++ ++|+|+||||+.+|+.|++ +++|+++|||||||+||++|||++.|+
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa 257 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAA 257 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHH
Confidence 999999999999999985 478899998 7999999999999999998 369999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeE
Q 007627 318 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 397 (595)
Q Consensus 318 ~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~v 397 (595)
+.+++|+|.|+||.|++++|||||+++||+|+++|+++ + ++++++.++++++++++++.++++++
T Consensus 258 ~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~------~---------~~li~~~~~~~v~~~l~~~~~~~~~~ 322 (465)
T PRK15398 258 RDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN------G---------AVLLTAEQAEKLQKVVLKNGGTVNKK 322 (465)
T ss_pred HHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc------C---------CccCCHHHHHHHHHHHhhcccccchh
Confidence 99999999999999999999999999999999999985 1 26899999999999999765456677
Q ss_pred eecCCCCCCCCCCCCccc---CCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCc--eeEEecCcHHH
Q 007627 398 LARGSFGHLSEGAVDQYF---PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL--GCAVFSGSQHR 472 (595)
Q Consensus 398 l~gG~~~~~~~~~~g~~~---~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL--~asVft~d~~~ 472 (595)
+.||.... .....|.++ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.++
T Consensus 323 ~~g~~~~~-i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~ 401 (465)
T PRK15398 323 WVGKDAAK-ILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDN 401 (465)
T ss_pred hhCCCHHH-HHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHH
Confidence 77764200 001135555 4899999999999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEcc
Q 007627 473 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 473 ~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
++++++++++|+|+||+... ..+||||.|.|.+- -+|+.| ...|..|++.+++
T Consensus 402 a~~~a~~l~~G~V~iN~~~~----~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 402 LNKMARAIQTSIFVKNGPSY----AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred HHHHHHhCCceEEEECCCCc----cccCcCCCCCceee-ecccCC-CCccchhhhhhhe
Confidence 99999999999999997632 34899999999852 248888 8999999987766
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-79 Score=657.83 Aligned_cols=412 Identities=17% Similarity=0.194 Sum_probs=348.9
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHH--HHHHHHhchhh
Q 007627 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK--ITWLLSEGEKW 165 (595)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~--l~~~~~~~~~~ 165 (595)
+++++++|++||+.|+++|+.+|.++|++++++|++|+++|++++++|+||+..++. .|+...... .+++....
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~~~--- 76 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKDEK--- 76 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhccc---
Confidence 478999999999999999999999999999999999999999999999999999885 355444332 23322111
Q ss_pred cCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhc
Q 007627 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245 (595)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~a 245 (595)
..+..+.. .....++.++|+|||++|+|||||+.++++++++||++||+||+||||.+|+++..+.+++.++|.++
T Consensus 77 -~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~a 152 (439)
T cd07081 77 -TCGVLTGD---ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAA 152 (439)
T ss_pred -cCceecCC---CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHc
Confidence 11111111 12345789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHH
Q 007627 246 GAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322 (595)
Q Consensus 246 Glp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~ 322 (595)
|+|+|++|+|+|.+ +.+++|++ +||+|+||||+. |++.|++++||+++|||||||+||++|||++.|++.+++
T Consensus 153 G~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~ 228 (439)
T cd07081 153 GAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVK 228 (439)
T ss_pred CCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHH
Confidence 99999999999854 78999998 899999999987 577888999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCC
Q 007627 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402 (595)
Q Consensus 323 ~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~ 402 (595)
|+|.|+||.|++.+|||||+++||+|+++|.+++ ||+++.+++++++++|+++.++|++++ ||.
T Consensus 229 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~-gg~ 292 (439)
T cd07081 229 SKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIV-GQD 292 (439)
T ss_pred HHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCccc-CCC
Confidence 9999999999999999999999999999998863 789999999999999999999999875 443
Q ss_pred CCCCCCCCCCcccCCe---eeecCC--CCCcccccccccCceeEEeeCCHHHHHHHhhcC----CCCceeEEecCc---H
Q 007627 403 FGHLSEGAVDQYFPPT---VIVNVN--HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS----RYGLGCAVFSGS---Q 470 (595)
Q Consensus 403 ~~~~~~~~~g~~~~PT---vl~~v~--~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~----~~gL~asVft~d---~ 470 (595)
.... ....|+|++|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .
T Consensus 293 ~~~~-~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~ 371 (439)
T cd07081 293 AYKI-AAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAI 371 (439)
T ss_pred HHHH-HHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchH
Confidence 1000 01358899999 999998 999999999999999999999999999999975 799999999999 9
Q ss_pred HHHHHHHHHhccCCeeecCCCccc-ccCCCCCCCcCCC--CCCCCCcHH-----HHhccceeeEEE
Q 007627 471 HRAREIAAQIQCGVAAINDFASNY-MCQSLPFGGVKDS--GFGRFAGVE-----GLRACCLVKSVV 528 (595)
Q Consensus 471 ~~~~~~~~~l~~G~v~IN~~~~~~-~~~~~PfGG~~~S--G~G~~~G~~-----gl~~~t~~k~v~ 528 (595)
++++++++++++|+|+||+...+. ....--|||.+.+ |.|.++|.. +.++|++.|.+.
T Consensus 372 ~~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
T cd07081 372 ENMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVA 437 (439)
T ss_pred HHHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeee
Confidence 999999999999999999754222 1122346566544 445544433 356677766654
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-77 Score=642.97 Aligned_cols=389 Identities=20% Similarity=0.218 Sum_probs=338.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhhhh-------hHHHhHHHH
Q 007627 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCEK 154 (595)
Q Consensus 86 ~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~~ 154 (595)
+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+. .++.. .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999888774 34432 578888888
Q ss_pred HHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHH
Q 007627 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 234 (595)
Q Consensus 155 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l 234 (595)
+++++.+.+.. +. ..+......+...+++++|+|||++|+||| | .++++++++||++||+||+||||.+|.++.++
T Consensus 84 ~~~~a~~~~~~-g~-~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l 159 (417)
T PRK00197 84 LRQVAALPDPV-GE-VLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL 159 (417)
T ss_pred HHHHhhcCCCc-cc-cccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence 88888765532 11 111100011235688999999999999986 4 77899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcEEeeeCC-hh-HHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCC
Q 007627 235 FRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310 (595)
Q Consensus 235 ~~~~~~~l~~aGlp~g~v~vv~g~-~~-~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~d 310 (595)
++++.++|.++|+|+|++|+|+|+ .+ .++.|.+ ++|+|+||||+++|+.|++.+ +||+++|||||||+||++|
T Consensus 160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~d 236 (417)
T PRK00197 160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDES 236 (417)
T ss_pred HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCC
Confidence 999999999999999999999964 34 5677774 899999999999999999875 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHH
Q 007627 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 390 (595)
Q Consensus 311 aDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a 390 (595)
||++.|++.+++|+|.|+| .|++++|+|||+++||+|+++|++++++++.+
T Consensus 237 Adl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 287 (417)
T PRK00197 237 ADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE---------------------------- 287 (417)
T ss_pred CCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999887531
Q ss_pred HhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcH
Q 007627 391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 470 (595)
Q Consensus 391 ~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~ 470 (595)
++ ||.. ..+ |+ |||+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 288 ------~~-~~~~------~~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~ 349 (417)
T PRK00197 288 ------LR-GDEA------ALA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDY 349 (417)
T ss_pred ------Ee-cCHH------HHH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCH
Confidence 22 2210 012 33 9998 47899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC----CCCcHHHHhccceeeEEEEc
Q 007627 471 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 471 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~G~~gl~~~t~~k~v~~~ 530 (595)
++++++++++++|+|+||+..... . ..||||.|.||+| |++|.+|+++||+.|+++..
T Consensus 350 ~~~~~~~~~l~~G~v~VN~~~~~~-~-~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~ 411 (417)
T PRK00197 350 AAAERFLNEVDSAAVYVNASTRFT-D-GGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG 411 (417)
T ss_pred HHHHHHHHhCCeeEEEEeCCCccC-C-CCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence 999999999999999999875443 3 4899999999999 99999999999999999763
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-77 Score=641.77 Aligned_cols=384 Identities=22% Similarity=0.240 Sum_probs=333.6
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChh----hhhh-------hHHHhHHHHHHHH
Q 007627 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV----DASL-------GEIMTTCEKITWL 158 (595)
Q Consensus 90 ~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~----ea~~-------~Ei~~~~~~l~~~ 158 (595)
..+++|++||+.|+++|.++|.++|+++++.|.+|+++|++++++|+||+.. ++.. .|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999888777643 3322 4788888888888
Q ss_pred HHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 007627 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (595)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~ 238 (595)
+...+.. . ...+......+...+++++|+|||++|+|| +| .++++++++||++||+||+|||+.+|+++..+.+++
T Consensus 82 a~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~ 157 (406)
T cd07079 82 AALPDPV-G-EVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII 157 (406)
T ss_pred HhcCCCC-c-ccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence 7664321 1 111110000123467899999999999996 56 778999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEeeeCC-h-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHH
Q 007627 239 QAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 314 (595)
Q Consensus 239 ~~~l~~aGlp~g~v~vv~g~-~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~ 314 (595)
+++|.++|+|+|++|+|+|. . +.++.|++ ++|+|+||||+.+|+.|+++| ++|+++|||||||+||++|||++
T Consensus 158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~ 234 (406)
T cd07079 158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLE 234 (406)
T ss_pred HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHH
Confidence 99999999999999999985 3 45676776 699999999999999999877 69999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcC
Q 007627 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG 394 (595)
Q Consensus 315 ~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~G 394 (595)
.|++.+++|+|.|+| .|++++|||||+++||+|+++|++++++ .|
T Consensus 235 ~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~g 279 (406)
T cd07079 235 MAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AG 279 (406)
T ss_pred HHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CC
Confidence 999999999999999 9999999999999999999999998765 25
Q ss_pred CeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHH
Q 007627 395 AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474 (595)
Q Consensus 395 a~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~ 474 (595)
++++.|+.. ..|++|| +++||++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 280 a~~~~g~~~--------~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~ 347 (406)
T cd07079 280 VELRGDEET--------LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAE 347 (406)
T ss_pred CEEecCHHH--------HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHH
Confidence 665433220 1378888 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCeeecCCCcccccCCCCCCCcCCCCC----CCCCcHHHHhccceeeEEEE
Q 007627 475 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF----GRFAGVEGLRACCLVKSVVE 529 (595)
Q Consensus 475 ~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~----G~~~G~~gl~~~t~~k~v~~ 529 (595)
++++++++|+|+||+..... . .+||||.|+||+ |+++|.+|+++||+.|+++.
T Consensus 348 ~~~~~~~~G~v~iN~~~~~~-~-~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 348 RFLREVDSAAVYVNASTRFT-D-GGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred HHHHhCCeeEEEEeCCCccc-C-CCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 99999999999999875443 3 479999999998 99999999999999999865
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-75 Score=633.98 Aligned_cols=417 Identities=17% Similarity=0.142 Sum_probs=366.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHh
Q 007627 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161 (595)
Q Consensus 82 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~ 161 (595)
..+.+|+++++++|++||+.|+++|.++|.++|+++++.|.+++++|++++++|+||+..+++..+.....+.+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 45788999999999999999999999999999999999999999999999999999998886543444456666665543
Q ss_pred chhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 007627 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (595)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~ 241 (595)
.+. .. . ... ..+...+..++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|+++..++++++++
T Consensus 84 ~~~-~G-~-~~~---~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~ 157 (488)
T TIGR02518 84 MKT-IG-I-LSE---DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKA 157 (488)
T ss_pred Ccc-cc-e-ecC---CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHH
Confidence 322 11 1 111 12345678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHH
Q 007627 242 LAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 318 (595)
Q Consensus 242 l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~ 318 (595)
|.++|+|+|+||+|+|. .+.+++|++ +||+|+||||+.++ +.++++++|+++|+|||||+||++|||++.|++
T Consensus 158 l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~----~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~ 233 (488)
T TIGR02518 158 AEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV----KAAYSSGTPAIGVGPGNGPAYIERTANVKKAVR 233 (488)
T ss_pred HHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH----HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHH
Confidence 99999999999999985 478899998 89999999999965 445667899999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHH-------HHhccCCCC-CCCCCCcccccCHHHHHHHHHHHHHH
Q 007627 319 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI-------VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDA 390 (595)
Q Consensus 319 ~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~-------~~~l~~G~~-~~~~~~~G~li~~~~~~~~~~~i~~a 390 (595)
.+++|+|+|+||.|++.+|||||+++||+|+++|+++ .+.+++|+| .++++++||+++.++++++.++++++
T Consensus 234 ~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~a 313 (488)
T TIGR02518 234 DIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLT 313 (488)
T ss_pred HHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccc
Confidence 9999999999999999999999999999999999998 899999996 56788999999999999999999999
Q ss_pred HhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhc----CCCCceeEEe
Q 007627 391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND----SRYGLGCAVF 466 (595)
Q Consensus 391 ~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~----~~~gL~asVf 466 (595)
+.+|+++++||.. +++++|++ ++|+||||++|++|+|+||||+++|+ ++|||+++||
T Consensus 314 v~~gakll~gg~~------------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~ 374 (488)
T TIGR02518 314 VPEDAKVLIGEQN------------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIH 374 (488)
T ss_pred cCCCCEEEEeCCC------------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEE
Confidence 9999999999861 35678886 79999999999999999999999988 6899999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCCcc------c---ccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEc
Q 007627 467 SGSQHRAREIAAQIQCGVAAINDFASN------Y---MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 467 t~d~~~~~~~~~~l~~G~v~IN~~~~~------~---~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~ 530 (595)
|+|.++++++++++++|+|+||++..+ . ....+.||+++.++.. | +-|++++++.|.|...
T Consensus 375 T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~--~-~v~~~~l~~~k~v~~~ 444 (488)
T TIGR02518 375 SENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS--D-NITPENLINIRRVAYG 444 (488)
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC--C-CCCHHHhheeeEEEec
Confidence 999999999999999999999964311 1 1123348888777776 3 8899999999998754
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-75 Score=679.00 Aligned_cols=425 Identities=19% Similarity=0.217 Sum_probs=368.8
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHH
Q 007627 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL 159 (595)
Q Consensus 80 v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~ 159 (595)
...++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..++...++..+.+.+++++
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~~ 85 (862)
T PRK13805 6 MAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNSY 85 (862)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999999999999999999998875434444444444333
Q ss_pred HhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHH
Q 007627 160 SEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239 (595)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~ 239 (595)
. .++.... ... ......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++++++
T Consensus 86 ~-~~~~~g~--~~~---~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~ 159 (862)
T PRK13805 86 K-DEKTVGV--IEE---DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVL 159 (862)
T ss_pred c-CCCcccc--cCc---CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHH
Confidence 2 1111110 110 113456789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHH
Q 007627 240 AALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 316 (595)
Q Consensus 240 ~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~a 316 (595)
++|.++|+|+|+||+|+|. .+.++.|++ ++|+|+||||+.++ +.|+++++|+++|+|||||+||++|||++.|
T Consensus 160 ~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~A 235 (862)
T PRK13805 160 DAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRA 235 (862)
T ss_pred HHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHH
Confidence 9999999999999999984 478999998 69999999999864 5667899999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCe
Q 007627 317 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE 396 (595)
Q Consensus 317 a~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~ 396 (595)
++.|++|+|+|+||.|++++|||||+++||+|+++|+++ | +++++++++++++++|++|++.|++
T Consensus 236 a~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~------g---------~~l~~~~~~~~v~~~i~~a~~~~~~ 300 (862)
T PRK13805 236 VNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH------G---------AYFLNKKELKKLEKFIFGKENGALN 300 (862)
T ss_pred HHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh------C---------CeeCCHHHHHHHHHHHhhccCCCcC
Confidence 999999999999999999999999999999999999885 1 5799999999999999998766654
Q ss_pred E-eecCCCCCCCCCCCCcccCCee------eecCCCCCcccccccccCceeEEeeCCHHHHHHHhhc----CCCCceeEE
Q 007627 397 I-LARGSFGHLSEGAVDQYFPPTV------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND----SRYGLGCAV 465 (595)
Q Consensus 397 v-l~gG~~~~~~~~~~g~~~~PTv------l~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~----~~~gL~asV 465 (595)
. +.||..... ....|.|++||+ +.+++++|++++ |+||||++|++|+|+||||+++|+ ++|||+++|
T Consensus 301 ~~~~g~~~~~~-~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i 378 (862)
T PRK13805 301 ADIVGQSAYKI-AEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVI 378 (862)
T ss_pred ccccCCCHHHH-HHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE
Confidence 3 456542100 012488999997 778999999887 799999999999999999999998 489999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCCc--------ccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccc
Q 007627 466 FSGSQHRAREIAAQIQCGVAAINDFAS--------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 532 (595)
Q Consensus 466 ft~d~~~~~~~~~~l~~G~v~IN~~~~--------~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~ 532 (595)
||+|.++++++++++++|+|+||.... ....+.+|||| |.||+|++||+.|+++|++.|+|..++.
T Consensus 379 ~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~ 452 (862)
T PRK13805 379 YTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRE 452 (862)
T ss_pred ECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccc
Confidence 999999999999999999999998641 13456799998 9999999999999999999999998774
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=629.51 Aligned_cols=374 Identities=19% Similarity=0.223 Sum_probs=334.9
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHH-HHHHHHHhchhhc
Q 007627 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE-KITWLLSEGEKWL 166 (595)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~-~l~~~~~~~~~~~ 166 (595)
+++++++|++||..|+++|.++|.++|++++++|++++++|++++++|+||+..++...|+...++ .++++... +..
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 478999999999999999999999999999999999999999999999999999986557777777 67777642 211
Q ss_pred CcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC
Q 007627 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246 (595)
Q Consensus 167 ~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aG 246 (595)
. ..... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.++++++|.++|
T Consensus 79 g-~~~~~----~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG 153 (436)
T cd07122 79 G-VIEED----EEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153 (436)
T ss_pred e-eeccC----CCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence 1 11111 123567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHH
Q 007627 247 APENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 323 (595)
Q Consensus 247 lp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~ 323 (595)
+|+|++|+|+|.+ +.++.|++ ++|+|+||||++++ +.++++++|+++|+|||||+||++|||++.|++.+++|
T Consensus 154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~ 229 (436)
T cd07122 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS 229 (436)
T ss_pred CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 9999999999854 77889987 89999999999975 45677899999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhc-------cCCCCC-CCCCCcccccCHHHHHHHHHHHHHHHhcCC
Q 007627 324 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV-------SAGPPL-AGKYDMGALCLLEHSEKLQNLVNDALDKGA 395 (595)
Q Consensus 324 ~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l-------~~G~~~-~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga 395 (595)
+|.|+||.|++++|||||+++||+|+++|+++...+ ++|++. +.++++||+++..+.+++.++++.++.+|+
T Consensus 230 ~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga 309 (436)
T cd07122 230 KTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDT 309 (436)
T ss_pred hhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCC
Confidence 999999999999999999999999999999998877 778773 567789999999988888888877777787
Q ss_pred eEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcC----CCCceeEEecCcHH
Q 007627 396 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS----RYGLGCAVFSGSQH 471 (595)
Q Consensus 396 ~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~----~~gL~asVft~d~~ 471 (595)
+++.||. .+++++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.+
T Consensus 310 ~vl~~~~------------------~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~ 370 (436)
T cd07122 310 KVLVAEE------------------TGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEE 370 (436)
T ss_pred eEEEEec------------------CCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHH
Confidence 7776653 5788999988 56799999999999999999999997 89999999999999
Q ss_pred HHHHHHHHhccCCeeecCCC
Q 007627 472 RAREIAAQIQCGVAAINDFA 491 (595)
Q Consensus 472 ~~~~~~~~l~~G~v~IN~~~ 491 (595)
+++++++++++|+|+||+..
T Consensus 371 ~a~~~~~~l~aG~V~IN~~~ 390 (436)
T cd07122 371 VIEEFALRMPVSRILVNTPS 390 (436)
T ss_pred HHHHHHhhCCceEEEEeCCc
Confidence 99999999999999999754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-74 Score=648.13 Aligned_cols=383 Identities=18% Similarity=0.212 Sum_probs=334.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhhC--CChhhhh---hhHHHhHHHH
Q 007627 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEIS------SRDTG--KTMVDAS---LGEIMTTCEK 154 (595)
Q Consensus 86 ~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~------~~e~G--k~~~ea~---~~Ei~~~~~~ 154 (595)
+++++++++|++||+.|+++|..+|.++|+++++.|++|.++|++++ ++|+| |+..++. .+|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 67999 8877764 4699999999
Q ss_pred HHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHH
Q 007627 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 234 (595)
Q Consensus 155 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l 234 (595)
++|+++.. +.... ..+......+...++.++|+|||++|+||| |+.++ +++++||++||+||+||||.||+++..+
T Consensus 374 ~~~~a~~~-~~~g~-~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l 449 (718)
T PLN02418 374 IRQLADME-DPIGR-VLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAIL 449 (718)
T ss_pred HHHHhcCc-cccCc-cccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHH
Confidence 99999873 33221 111000011223678999999999999999 99998 8999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCC----cEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEc
Q 007627 235 FRIIQAALAAVGAPEN----LVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 308 (595)
Q Consensus 235 ~~~~~~~l~~aGlp~g----~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~ 308 (595)
++++++ + +|+| ++|+|+|+.+.++.|+. .+|+|+||||+. .+++.+++++||+++|||||||+||+
T Consensus 450 ~~l~~e----A-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lELGGk~p~iV~ 521 (718)
T PLN02418 450 HKVITD----A-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGHADGICHVYVD 521 (718)
T ss_pred HHHHHH----H-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEeCCCcceEEEe
Confidence 888765 5 7777 49999986677888887 999999999996 56666777899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHH
Q 007627 309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388 (595)
Q Consensus 309 ~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~ 388 (595)
+|||++.|++.+++|+|.| ||.|++++|+|||+++||+ | .+.++|+
T Consensus 522 ~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~--------------G-------------------~~~~~i~ 567 (718)
T PLN02418 522 KSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN--------------G-------------------GLNDLLV 567 (718)
T ss_pred CCCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc--------------c-------------------cHHHHHH
Confidence 9999999999999999999 9999999999999999997 1 3588999
Q ss_pred HHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecC
Q 007627 389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468 (595)
Q Consensus 389 ~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~ 468 (595)
+|+++||++ +||.+. .| ++. + ++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 568 ~a~~~Ga~l-~Gg~~~------~g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~ 632 (718)
T PLN02418 568 ALRSAGVTL-YGGPRA------SK------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTE 632 (718)
T ss_pred HHHHCCCEE-ECCccc------cC------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcC
Confidence 999999999 688631 13 233 3 78999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCC--CCCC--cHHHHhccceeeEEEEcc
Q 007627 469 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF--GRFA--GVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 469 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~--G~~~--G~~gl~~~t~~k~v~~~~ 531 (595)
|.+++.++++++++|+|+||++..+. ...||||+|+||+ ||+| |++||++||+.|+|+...
T Consensus 633 d~~~a~~~a~~l~aG~V~IN~~~~~~--~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 633 DSEVAEIFLRQVDSAAVFHNASTRFS--DGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred CHHHHHHHHHhCCeeEEEEeCCCCCC--CCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence 99999999999999999999875433 3479999999999 9886 999999999999998754
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-75 Score=589.02 Aligned_cols=451 Identities=26% Similarity=0.427 Sum_probs=406.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHh
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEH 124 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~--W~~~~~~~R~~~L~~l~~~l~~~ 124 (595)
.+.++||+|+|++++++.++..+||+||.+|++++.++..|+|+|+++|+.||+. |.++|..+|.+.|.++++++++|
T Consensus 420 ~ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h 499 (881)
T KOG2452|consen 420 MPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQH 499 (881)
T ss_pred CcHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhc
Confidence 4478999999999999999999999999999999999999999999999999975 99999999999999999999999
Q ss_pred HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccc-cccceEEEecceEEEEEcCcchhhH
Q 007627 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-HKKAKVEFHPLGVVGAIVSWNYPFH 203 (595)
Q Consensus 125 ~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~PlGVV~~I~p~N~P~~ 203 (595)
++||+.+.++|.|.-..-+.-.-+...++..||++.++++... ...|-+-.-+ ..-....++|.|||++|.|||||+.
T Consensus 500 ~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg-~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplm 578 (881)
T KOG2452|consen 500 QEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG-STIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLM 578 (881)
T ss_pred cchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccC-ceeccccCCCCCcceeeecCcceeEEEeccCCchHH
Confidence 9999999999999877666556677789999999999887532 3333211111 2345688999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChh-HHHHHHh--CCCEEEEeCChhH
Q 007627 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGV 280 (595)
Q Consensus 204 ~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~-~~~~L~~--~vd~I~ftGS~~~ 280 (595)
.+.|+.++.|++- ..+++. -.|++|+++|.+. +++.|.. ++++|-||||+++
T Consensus 579 mlswk~aaclaa~-----------------~~k~~e--------~sgvini~~gsgslvg~rls~hpdvrkigftgstei 633 (881)
T KOG2452|consen 579 MLSWKTAACLAAQ-----------------VLKFAE--------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEV 633 (881)
T ss_pred HHHHHHHHHHHHH-----------------Hhhhhh--------hcceEEEecCCcchhccccccCCccceeccccchHH
Confidence 9999999888731 112211 2489999999874 6888888 9999999999999
Q ss_pred HHHHHHHhhc-CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhc
Q 007627 281 GRMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (595)
Q Consensus 281 g~~v~~~aa~-~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l 359 (595)
|+.||+.|+. +.|.|.|||||++|+||+.||||+.|++..+.+.|+|-|.+|++..|++|.++++|+|+.++.+.++++
T Consensus 634 g~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~ 713 (881)
T KOG2452|consen 634 GKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKM 713 (881)
T ss_pred HHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhh
Confidence 9999999885 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCce
Q 007627 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (595)
Q Consensus 360 ~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl 439 (595)
++|+|++.+++-||.-..+|..++.++++.+++.||++.+||++. .+.|.||+|||++|++.+|-+..||.||||+
T Consensus 714 ~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~----~r~g~~f~pti~s~i~d~~f~a~eesfgpim 789 (881)
T KOG2452|consen 714 KVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQV----PRPGFFFEPTVFTDVEDHMFIAKEESFGPVM 789 (881)
T ss_pred ccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccC----CCCCcccCCeeecccchhhhhhhccccCceE
Confidence 999999999999999888999999999999999999999999975 4689999999999999999999999999999
Q ss_pred eEEeeC--CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHH
Q 007627 440 PIMKFN--TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG 517 (595)
Q Consensus 440 ~v~~~~--~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~g 517 (595)
.|-+|+ |+|+.++.+|+++|||++.|||+|...+.++++.|++|+|.||...-.. . ..||||+|+||+|+.-|.+.
T Consensus 790 ~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktd-v-aapfggfkqsgfgkd~ge~a 867 (881)
T KOG2452|consen 790 IISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTD-V-AAPFGGFKQSGFGKDLGEAA 867 (881)
T ss_pred EEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccc-c-ccCCCCccccccccchhHHH
Confidence 999995 4889999999999999999999999999999999999999999764332 2 38999999999999999999
Q ss_pred HhccceeeEEEE
Q 007627 518 LRACCLVKSVVE 529 (595)
Q Consensus 518 l~~~t~~k~v~~ 529 (595)
|.+|...|+|+.
T Consensus 868 lneyl~~ktit~ 879 (881)
T KOG2452|consen 868 LNEYLRVKTVTF 879 (881)
T ss_pred HhhheeeEEEEe
Confidence 999999999875
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-71 Score=592.85 Aligned_cols=376 Identities=15% Similarity=0.145 Sum_probs=333.7
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhh----------hhHHHhHHHHHHHHHHhc
Q 007627 93 AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS----------LGEIMTTCEKITWLLSEG 162 (595)
Q Consensus 93 ~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~----------~~Ei~~~~~~l~~~~~~~ 162 (595)
++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+..+.. ..|+...++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999865432 137888888888888765
Q ss_pred hhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 007627 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (595)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l 242 (595)
.+.... ..+. ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|+++.++.+++++++
T Consensus 81 ~~~~~~-~~~~-----~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~ 153 (397)
T cd07077 81 GHIQDV-LLPD-----NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD 153 (397)
T ss_pred Ccccce-EecC-----CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence 443321 1111 2356899999999999999999999 99999999999999999999999999999999998764
Q ss_pred HhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHH
Q 007627 243 AAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319 (595)
Q Consensus 243 ~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~ 319 (595)
++|+|++++++++|.+ +.+..|++ ++|+|+||||+.+++.+++.+. ++|+++|+|||+|+||++|||++.|++.
T Consensus 154 -~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~ 230 (397)
T cd07077 154 -AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGS 230 (397)
T ss_pred -hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHH
Confidence 4789999999999754 77888987 7999999999999999998884 7999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEee
Q 007627 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399 (595)
Q Consensus 320 i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~ 399 (595)
+++++|.| ||.|++++|||||+++||+|+++|+++++. +|++++.
T Consensus 231 ~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~ 275 (397)
T cd07077 231 VHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQ 275 (397)
T ss_pred HHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCC
Confidence 99999999 999999999999999999999999998754 4777777
Q ss_pred cCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHH----HHHHHhhcCCCCceeEEecCcHHHHHH
Q 007627 400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE----EVVKLANDSRYGLGCAVFSGSQHRARE 475 (595)
Q Consensus 400 gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~----eAi~~aN~~~~gL~asVft~d~~~~~~ 475 (595)
||. +.|+.|| ++|++++||+||||++|++|+|+| +|++++|+++|||++||||+|.+++++
T Consensus 276 g~~---------~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~ 340 (397)
T cd07077 276 ETK---------PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDD 340 (397)
T ss_pred Cce---------eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence 664 3577776 789999999999999999999996 666788999999999999999999999
Q ss_pred HHHHhccCCeeecCCCcccccCCCCCCCcC--CCCCCCCCc-HHHHhccceeeEEE
Q 007627 476 IAAQIQCGVAAINDFASNYMCQSLPFGGVK--DSGFGRFAG-VEGLRACCLVKSVV 528 (595)
Q Consensus 476 ~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~--~SG~G~~~G-~~gl~~~t~~k~v~ 528 (595)
+++++++|+|+||+...+.....+||||.+ .||+|+++| .+|+++|++.|+|+
T Consensus 341 ~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 341 FVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred HHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 999999999999998766433458999999 899999999 99999999999985
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-69 Score=613.19 Aligned_cols=386 Identities=17% Similarity=0.176 Sum_probs=312.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhh--------hhHHHhHHHHHHHH
Q 007627 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS--------LGEIMTTCEKITWL 158 (595)
Q Consensus 87 ~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~--------~~Ei~~~~~~l~~~ 158 (595)
+++..+++|++||++|+++|.++|.++|++++++|++|+++|++ ++||+..++. +.|+..+.++++++
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~~----e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEILA----ENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHH----HHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 48888999999999999999999999999999999999999974 6666665442 22333333333333
Q ss_pred HHhchhhcCccc-----ccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 007627 159 LSEGEKWLKPEY-----RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (595)
Q Consensus 159 ~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~ 233 (595)
+++.+.+..... .+......+...+++++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|+|+.+
T Consensus 363 ~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~ 440 (715)
T TIGR01092 363 AISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAI 440 (715)
T ss_pred HHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHH
Confidence 333333221100 00000001223468899999999999999 9998 6899999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCC
Q 007627 234 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 311 (595)
Q Consensus 234 l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~da 311 (595)
+.++++++| ..|.+++++++|+|..+.++.|.. .+|+|+||||+.+|+.|+++|+ ||+++|||||||+||++||
T Consensus 441 l~~l~~~al-p~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~dA 516 (715)
T TIGR01092 441 LHKVITEAI-PIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKSA 516 (715)
T ss_pred HHHHHHHHc-CCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCCC
Confidence 999988752 233334579999864466777776 8999999999999999999875 9999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Q 007627 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 391 (595)
Q Consensus 312 Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~ 391 (595)
|++.|++.++.++|.| ||.|++++|||||+++||+ + .+.+++++++
T Consensus 517 Dl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~----------------~-----------------~~~~~v~~~~ 562 (715)
T TIGR01092 517 SVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN----------------G-----------------LLDDLIDMLR 562 (715)
T ss_pred CHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc----------------h-----------------hHHHHHHHHH
Confidence 9999986666666555 9999999999999999985 0 2667888888
Q ss_pred hcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHH
Q 007627 392 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 471 (595)
Q Consensus 392 ~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~ 471 (595)
++|++++ ||.+. .+ |+. ..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 563 ~~Ga~l~-Gg~~~------~~-~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~ 629 (715)
T TIGR01092 563 TEGVTIH-GGPRF------AA-YLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDEN 629 (715)
T ss_pred HCCCEEE-CCcch------hh-eec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHH
Confidence 8999985 77631 12 332 13679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCC----CCcHHHHhccceeeEEEEcc
Q 007627 472 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR----FAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 472 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~----~~G~~gl~~~t~~k~v~~~~ 531 (595)
+++++++++++|+|+||+.... . ..+||||+|.||+|+ ++|++|+++||+.|+|....
T Consensus 630 ~a~~~~~~i~sG~V~vN~~~~~-~-~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 630 VAEFFLQHVDSAAVFHNASTRF-S-DGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred HHHHHHHhCCeeEEEEeCCCCC-C-CCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 9999999999999999987432 2 348999999999995 48999999999999997754
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-69 Score=559.98 Aligned_cols=440 Identities=21% Similarity=0.376 Sum_probs=395.7
Q ss_pred CCCeEEeecCCCC-cEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh
Q 007627 62 SETKVQCYEPATM-KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (595)
Q Consensus 62 ~~~~~~~~~P~tg-~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~ 140 (595)
++++.++.||++- +++|+|..++.+|+++|++.|.+|+..|..+++.+|+.+|++++++++.+..+|..++.+|.||+.
T Consensus 125 ~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl 204 (769)
T COG4230 125 GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTL 204 (769)
T ss_pred CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 4677899999994 568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEE
Q 007627 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220 (595)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VV 220 (595)
.++ +.|+..+++.+|||+..++.-+. ...++|+|.|.+|+|||||+.+..+++++||++||+|+
T Consensus 205 ~na-IAEVREAVDFlrYYA~~ar~~~g---------------~~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~Vl 268 (769)
T COG4230 205 SNA-IAEVREAVDFLRYYAGQARDTFG---------------NLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVL 268 (769)
T ss_pred hhH-HHHHHHHHHHHHHHHHHHhcccC---------------ccccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccc
Confidence 998 68999999999999988765221 13467999999999999999999999999999999999
Q ss_pred EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChh-HHHHHHh--CCCEEEEeCChhHHHHHHHHhhc---CCCc
Q 007627 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASK---TLTP 294 (595)
Q Consensus 221 lKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~-~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~---~l~p 294 (595)
-||.|+||+.+..-+++++ ++|+|++++|+++|+++ +|..|+. +++.|+||||+++++.|.++.++ ..+|
T Consensus 269 AKPAEqTpLIAa~aV~ll~----eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~p 344 (769)
T COG4230 269 AKPAEQTPLIAAQAVRLLH----EAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIP 344 (769)
T ss_pred cCccccccHHHHHHHHHHH----HcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCc
Confidence 9999999999988777655 69999999999999995 7999998 99999999999999999998876 3578
Q ss_pred EeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccc
Q 007627 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 374 (595)
Q Consensus 295 v~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~l 374 (595)
++.|.||-|.+||+.+|--|+++..++.|+|.++||+|.+...+++++++.|..+++|+-.+.++++|+|..-.+|+||+
T Consensus 345 LIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPV 424 (769)
T COG4230 345 LIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPV 424 (769)
T ss_pred eEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee--CCHHHHHH
Q 007627 375 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF--NTDEEVVK 452 (595)
Q Consensus 375 i~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~--~~~~eAi~ 452 (595)
|+.++.+.++++|+..+.+|-.+..-... +....|.|+.||++.- + +-.-++.|+|||||-|++| +++++.|+
T Consensus 425 IdaEAk~~i~~Hi~~mr~~gr~v~q~~~~---~~~q~GtFv~Ptl~El-~-~~~eL~rEVFGPVLHVvRy~~~~l~~vi~ 499 (769)
T COG4230 425 IDAEAKANIEKHIQTMRSKGRLVHQAAAP---NSLQKGTFVAPTLIEL-E-NLDELQREVFGPVLHVVRYKRDELDEVID 499 (769)
T ss_pred ccHHHHHHHHHHHHHHHhcccchhhccCC---CccCCceeeCceeEEc-C-CHHHHHHHhccceeEEEEecHHHHHHHHH
Confidence 99999999999999988877554332221 1114799999999963 2 3334689999999999999 56899999
Q ss_pred HhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceeeE
Q 007627 453 LANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKS 526 (595)
Q Consensus 453 ~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k~ 526 (595)
-+|.+.|||+..|+|+-.+.+.++.+++++|+++||.-.+.......||||.|-||.| +-+|+.-|..|...+.
T Consensus 500 ~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p 574 (769)
T COG4230 500 QINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERP 574 (769)
T ss_pred HHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCC
Confidence 9999999999999999999999999999999999998655444445699999999999 6789999998887664
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-69 Score=572.85 Aligned_cols=377 Identities=17% Similarity=0.178 Sum_probs=317.7
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHhhCCCh--h----hhhhhHHHhHHHHHHHHHHhc
Q 007627 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI------SSRDTGKTM--V----DASLGEIMTTCEKITWLLSEG 162 (595)
Q Consensus 95 A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~------~~~e~Gk~~--~----ea~~~Ei~~~~~~l~~~~~~~ 162 (595)
|++||+.|+++|..+|.++|+++++.|++|+++|+++ +++|+||+. . ++ .+|+..+++.++|+++.+
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a-~~ev~~~~~~~~~~a~~a 79 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLT-EGRLKGIADGVKDVIELA 79 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCC-HHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999999999 999999993 2 23 469999999999999887
Q ss_pred hhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 007627 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (595)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l 242 (595)
+.. . +..+......+...+++++|+|||++|+||| | ..+++++++||++||+||+||||.+|+++..++++++++|
T Consensus 80 ~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al 155 (398)
T TIGR00407 80 DPV-G-KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL 155 (398)
T ss_pred CCC-c-ccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence 653 2 1111100112345788999999999999997 6 6788999999999999999999999999999999999999
Q ss_pred HhcCCCCCcEEeeeCC-h-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHH
Q 007627 243 AAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 318 (595)
Q Consensus 243 ~~aGlp~g~v~vv~g~-~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~ 318 (595)
.++|+|+|+||+|+|. . ++++.|.. ++|+|+||||+.+|+.+++. ..+|+++|+|||||+||++|||++.|++
T Consensus 156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~ 232 (398)
T TIGR00407 156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIK 232 (398)
T ss_pred HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHH
Confidence 9999999999999984 4 46777876 89999999999999988875 3589999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEe
Q 007627 319 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398 (595)
Q Consensus 319 ~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl 398 (595)
.+++|+|.+ ||.|++++|+|||+++||+|+++|+++++++.. .++ . .+.+++++.+
T Consensus 233 ~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~----~--~~~i~~~v~~--------- 288 (398)
T TIGR00407 233 VIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIH----A--DAYALKLLEL--------- 288 (398)
T ss_pred HHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEe----c--CHHHHHHHhc---------
Confidence 999999965 999999999999999999999999999987642 122 1 1344444321
Q ss_pred ecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHH
Q 007627 399 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478 (595)
Q Consensus 399 ~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~ 478 (595)
|. ||++ ++ +|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 289 --g~--------------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~ 349 (398)
T TIGR00407 289 --GP--------------ATEA-IV--CKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQN 349 (398)
T ss_pred --cC--------------cccc-cc--ccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHH
Confidence 11 3554 33 37899999999999999999999999999999999999999999999999999
Q ss_pred HhccCCeeecCCCcccccCCCCCCCcCC-----CCCCCCCcHHHHhccceee
Q 007627 479 QIQCGVAAINDFASNYMCQSLPFGGVKD-----SGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 479 ~l~~G~v~IN~~~~~~~~~~~PfGG~~~-----SG~G~~~G~~gl~~~t~~k 525 (595)
++++|+|+||++.... ...||| .+. ++-+...|+-+++.||..|
T Consensus 350 ~i~~G~v~iN~~~~~~--~~~pfG-~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 350 GVDSAAVYHNASTRFT--DGFRFG-FGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred hCCeeEEEEeCCCCcC--CCcccc-cceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999999999975543 237997 332 2345567899999888654
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-67 Score=560.74 Aligned_cols=362 Identities=38% Similarity=0.612 Sum_probs=334.8
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccC
Q 007627 94 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS 173 (595)
Q Consensus 94 ~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (595)
+|++|+.+|++++.++|.++|+++++.|.++.++|++++++|+||+..++ ..|+..+++.++++++..+++.......
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev~~~~~~l~~~~~~~~~~~~~~~~~- 79 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEA-LGEVARAIDTFRYAAGLADKLGGPELPS- 79 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccc-
Confidence 68899999999999999999999999999999999999999999999887 5699999999999998887765422111
Q ss_pred CcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEE
Q 007627 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253 (595)
Q Consensus 174 ~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~ 253 (595)
...+...+++++|+|||++|.|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+++++
T Consensus 80 --~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~----~ag~p~~~v~ 153 (367)
T cd06534 80 --PDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQ----EAGLPPGVVN 153 (367)
T ss_pred --cCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----hcCCCcCeEE
Confidence 1234567899999999999999999999999999999999999999999999999988877655 6899999999
Q ss_pred eeeCChh-HHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCC
Q 007627 254 VITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ 330 (595)
Q Consensus 254 vv~g~~~-~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ 330 (595)
+++|+.+ .++.|+. ++|.|.||||+++++.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||
T Consensus 154 ~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq 233 (367)
T cd06534 154 VVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQ 233 (367)
T ss_pred EEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999764 7888887 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCC
Q 007627 331 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 410 (595)
Q Consensus 331 ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~ 410 (595)
.|+++++||||++++|+|+++|+
T Consensus 234 ~C~s~~~v~v~~~~~~~f~~~l~--------------------------------------------------------- 256 (367)
T cd06534 234 ICTAASRLLVHESIYDEFVEKLV--------------------------------------------------------- 256 (367)
T ss_pred CCCCCcEEEEcHHHHHHHHHhhc---------------------------------------------------------
Confidence 99999999999999999999887
Q ss_pred CCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCC
Q 007627 411 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 490 (595)
Q Consensus 411 ~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~ 490 (595)
||+.++++++++++||+||||++|++|+|+||||+++|++++||++||||+|...++++++++++|+|+||+.
T Consensus 257 -------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~ 329 (367)
T cd06534 257 -------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDS 329 (367)
T ss_pred -------eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 6667778899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 491 ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 491 ~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
.... .+.+||||.|+||+|+++|++++++||+.|++.
T Consensus 330 ~~~~-~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 330 SIGV-GPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCC-CCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 7764 456899999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-67 Score=527.47 Aligned_cols=481 Identities=21% Similarity=0.310 Sum_probs=412.9
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-HhH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII-EHQ 125 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~-~~~ 125 (595)
..-+.|+|+-+-.. ......+|.+ .+.++.+..++.++|++||++|.+|++.|..+|+.+|.+++++.+++|. +++
T Consensus 59 evP~vIg~~~v~t~--~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr 136 (561)
T KOG2455|consen 59 EVPLVIGDKEVYTN--DEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYR 136 (561)
T ss_pred eccEEECCeeeecC--CcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHH
Confidence 34567777544432 2345678998 5568999999999999999999999999999999999999999999999 788
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecc-eEEEEEcCcchhhHh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHN 204 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pl-GVV~~I~p~N~P~~~ 204 (595)
-+|..+.+.-.||+..+|.+.-+...++.+|+.++.+.....-+.... ..+..+..+|+|+ |-|++|+||||-...
T Consensus 137 ~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~---~~~t~ns~~yRpleGFVaAisPFnftAI~ 213 (561)
T KOG2455|consen 137 YDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQ---TKGTWNSMEYRPLEGFVAAISPFNFTAIG 213 (561)
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccc---cCCCCcceeeccccceeEEecccceeeec
Confidence 899999999999999998554455667777777776665433222211 2356788999999 999999999998776
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHH
Q 007627 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (595)
Q Consensus 205 ~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g 281 (595)
.--..+|||+ ||+|++|||..+.+++.++.++++ |||+|+|++|+|++++ ..++.+++ .+..+.||||+.+-
T Consensus 214 gnLa~aPaLM-GN~VLwkPS~ta~lssYii~~il~----EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~f 288 (561)
T KOG2455|consen 214 GNLAGAPALM-GNVVLWKPSDTAALSSYIIYRILR----EAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTF 288 (561)
T ss_pred cccccChhhh-cceeeecccchhHHHHHHHHHHHH----HcCCCccceeeccCCCCeecceeccCcccceeeeecccHHH
Confidence 6666677887 999999999999999988777655 6999999999999987 56888877 99999999999999
Q ss_pred HHHHHHhhcCC------CcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHH
Q 007627 282 RMIMRNASKTL------TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355 (595)
Q Consensus 282 ~~v~~~aa~~l------~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~ 355 (595)
+.+.+..++++ .+++.|.||||--+|+++||++.++...++++|..+||.|.+.+|+||+++.++++.++|.+.
T Consensus 289 k~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~ 368 (561)
T KOG2455|consen 289 KHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEE 368 (561)
T ss_pred HHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHH
Confidence 99998887764 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCC-CCCCCCcccccCHHHHHHHHHHHHHHHhc-CCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccc
Q 007627 356 VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433 (595)
Q Consensus 356 ~~~l~~G~~-~~~~~~~G~li~~~~~~~~~~~i~~a~~~-Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 433 (595)
..++++|+| .+.++++|++|..++|+|++++|+.|+.. ..++++||+. ++..|+|++|||+..-+|.+++|.||
T Consensus 369 ~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~----DdS~G~FV~PTiv~~kdP~~pim~ee 444 (561)
T KOG2455|consen 369 HSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKC----DDSTGYFVEPTIVLSKDPKDPIMTEE 444 (561)
T ss_pred HhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcc----cCCCCeeecceEEEccCCCcchhhhh
Confidence 999999997 67889999999999999999999999753 4679999994 46789999999999999999999999
Q ss_pred cccCceeEEeeCC--HHHHHHHh-hcCCCCceeEEecCcHHHHHHHHHHhc--cCCeeecCCCcccccCCCCCCCcCCCC
Q 007627 434 AFGPIMPIMKFNT--DEEVVKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSG 508 (595)
Q Consensus 434 ~FGPVl~v~~~~~--~~eAi~~a-N~~~~gL~asVft~d~~~~~~~~~~l~--~G~v~IN~~~~~~~~~~~PfGG~~~SG 508 (595)
+|||||+|+.|+| ++|+++++ |.++|||+.+||++|.+.+.+..++|+ +|+.+|||-.+.......||||-+.||
T Consensus 445 ~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SG 524 (561)
T KOG2455|consen 445 IFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSG 524 (561)
T ss_pred ccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccC
Confidence 9999999999965 79999998 679999999999999999999999886 899999997555444457999999999
Q ss_pred CC-CCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCc
Q 007627 509 FG-RFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVA 549 (595)
Q Consensus 509 ~G-~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~ 549 (595)
.. +.+|+.-+..|+.++++-..- ..++++.||.+
T Consensus 525 TNDKaGgp~~l~RwtSp~~ikEt~-------~~l~d~~yp~~ 559 (561)
T KOG2455|consen 525 TNDKAGGPHYLLRWTSPLSIKETF-------VPLTDVKYPSM 559 (561)
T ss_pred CCCCCCCceEEEeecCcchhhhcc-------cCCcccCcCCC
Confidence 86 678888888888888764332 22446888863
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-66 Score=507.82 Aligned_cols=462 Identities=23% Similarity=0.368 Sum_probs=422.8
Q ss_pred CcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 007627 55 PRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 134 (595)
Q Consensus 55 g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~ 134 (595)
|+|.. ++..++.++|+++++|+.|..++.+|.+.++.+|++|++.|...|...|.++.+++.|.|+...+.|.++.++
T Consensus 26 gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvsl 103 (507)
T KOG2453|consen 26 GKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSL 103 (507)
T ss_pred eeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhh
Confidence 36755 5788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCChhhhhhhHHHhHHHHHHHHHHhchhhc---CcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHH
Q 007627 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWL---KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211 (595)
Q Consensus 135 e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ 211 (595)
|+||-..|. .+|+...++.++|.....+..- -|..++.. --.-.+.|+|+|++|+.+|||-...-|+-.-
T Consensus 104 emgkilaeg-vgevqeyvdicdyavglsr~l~g~i~pserpgh------alleqwnplg~vgvitafnfpcavygwnnai 176 (507)
T KOG2453|consen 104 EMGKILAEG-VGEVQEYVDICDYAVGLSRSLEGKIFPSERPGH------ALLEQWNPLGVVGVITAFNFPCAVYGWNNAI 176 (507)
T ss_pred hhhhHhhhc-chhHHHHHHHHHHhhhhhhhhCCcccCCCCCch------hHHHhcCCcceEEEEEeccCCceeeccCchh
Confidence 999999998 7899999998888766544332 23333332 2234688999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhh
Q 007627 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNAS 289 (595)
Q Consensus 212 ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa 289 (595)
|+.+||+|++||.+.+|+++....+++.+.|.+.-+|++.....+|+.+.+.++.+ ++..+.||||+.+|+.+.+..-
T Consensus 177 aMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vq 256 (507)
T KOG2453|consen 177 AMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQ 256 (507)
T ss_pred hhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988 9999999999999999998888
Q ss_pred cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCC
Q 007627 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369 (595)
Q Consensus 290 ~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~ 369 (595)
.+.-+..|||||+|+.||.+||||..++...++++...+||+|+...|+++|+++||+.+++|++..+++++|.|+++++
T Consensus 257 arfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~nt 336 (507)
T KOG2453|consen 257 ARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNT 336 (507)
T ss_pred HHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCc
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHH
Q 007627 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 449 (595)
Q Consensus 370 ~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~e 449 (595)
-+||+.++++...+++-++++++.|.++++||+.. +.+|+|++|||++ ..+|.++..+|.|.|||+|++|++++|
T Consensus 337 l~gplht~qav~~f~~~veeak~~ggki~yggkv~----er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~ee 411 (507)
T KOG2453|consen 337 LIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVL----ERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEE 411 (507)
T ss_pred eeccccCHHHHHHHHHHHHHHHhcCCeEEECCEee----ccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhh
Confidence 99999999999999999999999999999999964 4689999999997 899999999999999999999999999
Q ss_pred HHHHhhcCCCCceeEEecCcHHHHHHHHHH--hccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 450 VVKLANDSRYGLGCAVFSGSQHRAREIAAQ--IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 450 Ai~~aN~~~~gL~asVft~d~~~~~~~~~~--l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
|+++-|+.+.||++|+||+|..++.+...- -++|.|.||-+. ..+...-.|||-|..|-||+.|.+..++|.+..+-
T Consensus 412 a~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvnipt-sgaeiggafggek~tgggresgsdswkqymrrstc 490 (507)
T KOG2453|consen 412 AIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPT-SGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTC 490 (507)
T ss_pred hheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCC-CchhhcccccCccccCCCcccCchHHHHHHhhcee
Confidence 999999999999999999999999998754 479999999753 33444578999999999999999999999887665
Q ss_pred EEcc
Q 007627 528 VEDR 531 (595)
Q Consensus 528 ~~~~ 531 (595)
+++.
T Consensus 491 tiny 494 (507)
T KOG2453|consen 491 TINY 494 (507)
T ss_pred eeec
Confidence 5543
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=319.61 Aligned_cols=347 Identities=17% Similarity=0.190 Sum_probs=250.9
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH---HHHhhCCChhhhhhhHHHhHHHHHHHHHHhchh
Q 007627 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI---SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK 164 (595)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~---~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~ 164 (595)
+++.++..+++++.|..-+...|...++++...+..+.+.+.+. +..+..|+..+..+.| .+. ...++++
T Consensus 26 ~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~~~l~~------el~-~~~~Ld~ 98 (422)
T cd07080 26 VEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLERILER------ELG-SPGILDE 98 (422)
T ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHHHHHHH------hcC-CcccccC
Confidence 45566666777777777777777777777777777777777766 5556655444432211 111 1223333
Q ss_pred hcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHh
Q 007627 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244 (595)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~ 244 (595)
|.. .+...+++++|+|||++|+|||||+ +.+++++.||++||++|+|||+.+|.++.++.+++.+
T Consensus 99 w~~----------~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~---- 163 (422)
T cd07080 99 WVP----------PGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLAD---- 163 (422)
T ss_pred Ccc----------CCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHh----
Confidence 332 1346788999999999999999999 7999999999999999999999999999999888775
Q ss_pred cCCCC----CcEEee--eCCh-hHHHHHHhCCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCc-ceEEEcCCC----C
Q 007627 245 VGAPE----NLVDVI--TGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK-DAFIVCDDV----D 312 (595)
Q Consensus 245 aGlp~----g~v~vv--~g~~-~~~~~L~~~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk-~p~IV~~da----D 312 (595)
+ +|+ +.++++ +|+. +.++.|++.-|+|+||||+++++.|++.++.+ +.++|+||| +++|+++++ |
T Consensus 164 ~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~~~d 240 (422)
T cd07080 164 V-DPNHPLTDSISVVYWPGGDAELEERILASADAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALESEK 240 (422)
T ss_pred c-CCCCcccceEEEEEecCCchHHHHHHHHhCCEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhcccc
Confidence 4 677 888888 4655 47888888339999999999999999999865 579999999 555555668 9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCceEEEccch---HHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHH
Q 007627 313 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDI---YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389 (595)
Q Consensus 313 l~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v---~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~ 389 (595)
++.+++.+++++|.|+||.|+|+++||||+++ +|+|.++|.++++++....|.. ++ +.....++...-..
T Consensus 241 l~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~r~~ 313 (422)
T cd07080 241 LAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARARLE 313 (422)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 9999999999998875433321 11 33333333333222
Q ss_pred HHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCc
Q 007627 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469 (595)
Q Consensus 390 a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d 469 (595)
+...+...... . --.-||+.+-.+. +.. -..+=.+.|.++++++|++..++. |=-+.++|..+
T Consensus 314 ~~~~~~~~~~~-~-----------~~~~~v~~~~~~~--~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~ 376 (422)
T cd07080 314 AEFYELKGGVS-R-----------DLGWTVIISDEIG--LEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSP 376 (422)
T ss_pred HHHHHHhcCCC-C-----------CCCeEEEEeCCCC--ccC-CCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecCh
Confidence 22222111100 0 1113555433222 211 456677889999999999999986 55689999988
Q ss_pred HHHHHHHHHHhc-cCC
Q 007627 470 QHRAREIAAQIQ-CGV 484 (595)
Q Consensus 470 ~~~~~~~~~~l~-~G~ 484 (595)
.+. .++++++. .|.
T Consensus 377 ~~~-~~~~~~l~~~Gv 391 (422)
T cd07080 377 AEL-AELADALAAAGV 391 (422)
T ss_pred hhH-HHHHHHHHHcCc
Confidence 877 77777775 443
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=286.40 Aligned_cols=395 Identities=20% Similarity=0.219 Sum_probs=310.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCC----ChhhhhhhHHHhHHHHHHHHHHh
Q 007627 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK----TMVDASLGEIMTTCEKITWLLSE 161 (595)
Q Consensus 86 ~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk----~~~ea~~~Ei~~~~~~l~~~~~~ 161 (595)
.++.+..++|++|....+.++.++|.+.|.++++.|+++.++|.++..+|.-. ...++....+..+-+.|+-+++-
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 35778888999999999999999999999999999999999999988877432 12233333333444444444444
Q ss_pred chhhcC---c--ccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHH
Q 007627 162 GEKWLK---P--EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236 (595)
Q Consensus 162 ~~~~~~---~--~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~ 236 (595)
.++... | +.........+-..+-.+.|+||+++| |..--+.+.....-+|.+||+||+|.+..+.+|...+++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~ 160 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE 160 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence 333211 1 000111112345667889999999999 666667788888889999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcEEeeeCC-hhHHHHHHh---CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCC
Q 007627 237 IIQAALAAVGAPENLVDVITGF-AETGEALVS---SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 312 (595)
Q Consensus 237 ~~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~---~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daD 312 (595)
++++.|.++|+|++.||+|+.. .+....|+. .+|.|.-.||...-+.|.+.+. .||+-.+-|+|.++|+.+||
T Consensus 161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~AD 237 (417)
T COG0014 161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESAD 237 (417)
T ss_pred HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccCC
Confidence 9999999999999999999874 366666666 8999999999999999998887 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHh
Q 007627 313 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392 (595)
Q Consensus 313 l~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~ 392 (595)
+|.|.+.++.++.+..+- |.+.+.++||+.+.++|+..|.+.+...
T Consensus 238 ld~A~~ii~nAKtqrPs~-CNA~EtLLVh~~ia~~fLp~l~~~l~~~--------------------------------- 283 (417)
T COG0014 238 LDKALKIIVNAKTQRPSV-CNAAETLLVHRAIAKSFLPKLANALQEA--------------------------------- 283 (417)
T ss_pred HHHHHHHHHcccCCCCcc-cchHHHHHcCHHHHHHhHHHHHHHHHhc---------------------------------
Confidence 999999999999999885 9999999999999999999998887632
Q ss_pred cCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHH
Q 007627 393 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472 (595)
Q Consensus 393 ~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~ 472 (595)
|.++.+..... -+-|.. +.+....=+.+|..-+++.|-.++++||||+.+|....+++-+|.|+|.+.
T Consensus 284 -gvelr~d~~~~---------~~~~~~--~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~ 351 (417)
T COG0014 284 -GVELRGDAEAL---------ALLPDA--VKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYAN 351 (417)
T ss_pred -CeEEEcCHHHH---------Hhcccc--CCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHH
Confidence 11111110000 000000 022233346789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeeecCCCcccccCCCCCCCcC-C-CCCCCCCcHHHHhccceeeEEEEcc
Q 007627 473 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVK-D-SGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 473 ~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~-~-SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
+++|.+++++..|+||....|.......||..- - +.-..-.|+-||+++|..|.++...
T Consensus 352 a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~ 412 (417)
T COG0014 352 AERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGD 412 (417)
T ss_pred HHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCC
Confidence 999999999999999998777665556666532 1 2334567999999999999998643
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-25 Score=216.09 Aligned_cols=382 Identities=20% Similarity=0.249 Sum_probs=279.6
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHh------hCCChhhhhhhHHHhHHHHHHHHH--
Q 007627 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD------TGKTMVDASLGEIMTTCEKITWLL-- 159 (595)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e------~Gk~~~ea~~~Ei~~~~~~l~~~~-- 159 (595)
+++..+.||++.+..++++.++|.++|.+++++|..+..+|.++...| .|.. +.....+...-.++..+.
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~--~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLA--ESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCcc--HHHHHHhcCChHHHHHHHHH
Confidence 456678899999999999999999999999999999998888765544 4422 221112222222333222
Q ss_pred -----H---hchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHH
Q 007627 160 -----S---EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 231 (595)
Q Consensus 160 -----~---~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~ 231 (595)
+ ...+.++......+ -.-+-.-.|+||.++| |....-.+..-..-|+++||.+++|....+..+.
T Consensus 80 ~~~ia~~edpvGRVl~~~~ladg-----L~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn 152 (433)
T KOG4165|consen 80 LRQIAELEDPVGRVLKKTRLADG-----LELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSN 152 (433)
T ss_pred HHHHHhcccchhhheeeeeccCC-----ceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhH
Confidence 2 11122221122222 2334556799999999 5554444555556689999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcC
Q 007627 232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (595)
Q Consensus 232 ~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~ 309 (595)
..+.++++++|.+.|.|.+.||+|+...|+.+-|-- -||.|.-.||...-+.|....- +||...-.|.+.++|++
T Consensus 153 ~~L~~~v~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~ 229 (433)
T KOG4165|consen 153 AALHKLVQEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDK 229 (433)
T ss_pred HHHHHHHHHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEecc
Confidence 999999999999999999999999875555554422 8999999999999888876654 99999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccch-HHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHH
Q 007627 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388 (595)
Q Consensus 310 daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v-~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~ 388 (595)
|||++.|.+.+..++..+.. .|.+.+.+++|++. ...|.+. +..++.
T Consensus 230 dad~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~-------------------------------l~~~l~ 277 (433)
T KOG4165|consen 230 DADLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDD-------------------------------LINMLK 277 (433)
T ss_pred ccCHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHH-------------------------------HHHHHH
Confidence 99999998888888876654 49999999999973 2223322 222222
Q ss_pred HHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecC
Q 007627 389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468 (595)
Q Consensus 389 ~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~ 468 (595)
.+|.++.+|-+ .. .-.. | -++..+-++.|.-.=.++|-.++|+++||+.+|....+++-+|.|+
T Consensus 278 ---~~gVtl~agpk-l~----~~l~-~-------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe 341 (433)
T KOG4165|consen 278 ---EEGVTLHAGPK-LA----ALLK-F-------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTE 341 (433)
T ss_pred ---hcCeEEecChh-HH----hhcC-c-------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEec
Confidence 24555544432 11 0111 1 1345566788888888899999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCC--CCCC--CcHHHHhccceeeEEEEcc
Q 007627 469 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSG--FGRF--AGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 469 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG--~G~~--~G~~gl~~~t~~k~v~~~~ 531 (595)
|...+++|.+.+++..|+.|....+....+..+|. +-| .+|- .|+-|++.+...|++.+..
T Consensus 342 ~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGa--EVGIST~rIHARGPvGveGLlttkw~lRG~ 406 (433)
T KOG4165|consen 342 NEATAEHFLKHVDSACVFHNASTRFADGFRFGLGA--EVGISTSRIHARGPVGVEGLLTTKWLLRGK 406 (433)
T ss_pred CHHHHHHHHhccchhheeecccccccccccccccc--eeeeeccceeccCCccccceeeeeeEEecC
Confidence 99999999999999999999876654433333332 333 3443 5999999999999987754
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-13 Score=146.88 Aligned_cols=279 Identities=19% Similarity=0.215 Sum_probs=188.0
Q ss_pred ceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEee--eCC-
Q 007627 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI--TGF- 258 (595)
Q Consensus 182 ~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv--~g~- 258 (595)
.+.++.|.|+|+.|.|.|-|.. .+..++.+|.+||..|+|+|...+..+..+.+.+.++..+.-+ .+.+.++ ++.
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~-~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLV-GFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccch-HHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCc
Confidence 5678899999999999999986 5556778899999999999999999999988888764211101 1346666 333
Q ss_pred hhHHHHHHhCCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceE
Q 007627 259 AETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338 (595)
Q Consensus 259 ~~~~~~L~~~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv 338 (595)
.+..+.+.+..|.|+.+||.++.+.|.+.+ ...++.+.-..-.+-++|..+++++.+++.++.-.+...+|-|.|++.|
T Consensus 159 ~~~~~~~~~~~D~vv~wGgd~ti~~ir~~~-~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i 237 (399)
T PF05893_consen 159 EELEEALSQQADAVVAWGGDETIRAIRQPL-PPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI 237 (399)
T ss_pred hHHHHHHHHHCCEEEEeCCHHHHHHHHHHc-CCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence 345566666999999999999999998833 3334444445555677888888999999999999999999999999999
Q ss_pred EEc---cchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHH-----HHHHhcCCeEeecCCCCCCCCCC
Q 007627 339 YVH---RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV-----NDALDKGAEILARGSFGHLSEGA 410 (595)
Q Consensus 339 ~V~---~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i-----~~a~~~Ga~vl~gG~~~~~~~~~ 410 (595)
||. ..-.++|.++|.+.+++..---|.. ..+......+.... ..+...+.++. ++.
T Consensus 238 fv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~-------- 301 (399)
T PF05893_consen 238 FVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVW-SSD-------- 301 (399)
T ss_pred EEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCccee-ecC--------
Confidence 999 3456788888877776542111110 01222222222222 22343343444 222
Q ss_pred CCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCc-eeEEecCcHHHHHHHHHHh-ccCCeee
Q 007627 411 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL-GCAVFSGSQHRAREIAAQI-QCGVAAI 487 (595)
Q Consensus 411 ~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL-~asVft~d~~~~~~~~~~l-~~G~v~I 487 (595)
--.-||+.+..+ ......++=.+.|.++++.+|++..+|.... + +.+++..+ ....++++.+ ..|.--|
T Consensus 302 ---~~~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~-lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri 372 (399)
T PF05893_consen 302 ---DNSWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRG-LQTVGIYPWS-ERLEELARALAAAGVDRI 372 (399)
T ss_pred ---CCCEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCC-CeeEEEecCh-hhHHHHHHHHHhcCCeee
Confidence 112456654322 2334445668899999999999999998743 4 66776544 4455666644 4554333
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.9e-15 Score=130.04 Aligned_cols=136 Identities=20% Similarity=0.300 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCC
Q 007627 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 424 (595)
Q Consensus 345 ~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~ 424 (595)
.....+.|++..+.+++-+...+++|. .+...|+.++|+.- +...|...-.+.+.+|.|..||+|. |+
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~------~~~~~r~~yl~~ya~~~f~~~tiLs-vt 75 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSE------DPLDGRFIYLPGYAEGNFVGPTILS-VT 75 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCc------CccCCceEEeeccccCCcccceEEE-ec
Confidence 455677788888888887777777776 66778888888752 2233322223446789999999998 99
Q ss_pred CCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCc
Q 007627 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 492 (595)
Q Consensus 425 ~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~ 492 (595)
|+|.+..||+||||+..+.-+++||||.++|+.+||-+..+||.+.+.++.+....++|.+.+|-...
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP 143 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999997543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.09 E-value=2e-09 Score=103.47 Aligned_cols=168 Identities=15% Similarity=0.205 Sum_probs=127.2
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHH
Q 007627 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (595)
Q Consensus 303 ~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~ 382 (595)
.-+||++|.||+.|+..++.+.-..-| ..+.-.|+|||++.|+|+++++.+++.+.-- +-+...+.|
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~~~-----------va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLSPQ-----------VANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCChh-----------hccCcHHHH
Confidence 348999999999999999998766555 4577789999999999999999998766311 112233444
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCC-CCc
Q 007627 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR-YGL 461 (595)
Q Consensus 383 ~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~-~gL 461 (595)
-.+.++ .-+++++.++... .-..-.|.++.|++++. +.. --.+|+++..|++..||+++++... -.-
T Consensus 73 sl~~i~---~l~~~~I~~~~~~------~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~ 140 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFEN------VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD 140 (215)
T ss_pred HHHHHH---hcCCeEEEecccC------CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc
Confidence 444444 4689998885421 12234699999887652 222 3457999999999999999999742 234
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCCcccc
Q 007627 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 495 (595)
Q Consensus 462 ~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 495 (595)
+.|||++..+.+.+++.+|++..++||+......
T Consensus 141 SVsiW~ekla~~Yel~~~l~~~~f~iNC~~V~L~ 174 (215)
T PF07368_consen 141 SVSIWNEKLASAYELAARLPCDTFYINCFNVDLS 174 (215)
T ss_pred eEEEeCcHHHHHHHHHHhCCCCEEEEEeccCCch
Confidence 9999999999999999999999999999765543
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.2e-06 Score=100.08 Aligned_cols=102 Identities=14% Similarity=0.201 Sum_probs=79.5
Q ss_pred ccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeC
Q 007627 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257 (595)
Q Consensus 178 ~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g 257 (595)
.|.++.....|.|++++|+||| ..++.++..||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~------~~Lp~~~~~~~-- 1129 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL------ADLPGLVAARI-- 1129 (1208)
T ss_pred CCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH------HhCcccccccc--
Confidence 4789999999999999999999 458889999999999999999998752 11 23566555544
Q ss_pred ChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCC---CcEeecC
Q 007627 258 FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL---TPVTLEL 299 (595)
Q Consensus 258 ~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l---~pv~lEl 299 (595)
..+..+.. .++.|.|+||+++.+.+.++.+++- .|++.|.
T Consensus 1130 --~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 --DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred --ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 22335555 7999999999999999998887653 4444444
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=95.70 E-value=3.8 Score=44.11 Aligned_cols=259 Identities=18% Similarity=0.206 Sum_probs=115.0
Q ss_pred cccceEEEecceEEEEEcCc-chhh-HhhHHHHHHHHhcCCEEEEecCCCch--hHHHHHHHHHHHHHHhcCCCCCcEEe
Q 007627 179 HKKAKVEFHPLGVVGAIVSW-NYPF-HNIFNPMLAAVFSGNGIVIKVSENAS--WSGCFYFRIIQAALAAVGAPENLVDV 254 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~-N~P~-~~~~~~l~~ALaaGN~VVlKps~~~p--~s~~~l~~~~~~~l~~aGlp~g~v~v 254 (595)
+.....++.|+--|++..|. .+|+ ++.+..++||-.||..=|+-.+|-.+ .....+. -+.+.+|..+ |-.
T Consensus 97 G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL----~Aa~~~Gv~e--vy~ 170 (412)
T PF00815_consen 97 GVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVL----AAAHLAGVDE--VYK 170 (412)
T ss_dssp TEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHH----HHHHHTT-SE--EEE
T ss_pred CcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHH----HHHHHcCCCE--EEe
Confidence 44556789999999999993 3343 24556678999999755444333211 1111111 1233577744 222
Q ss_pred eeCChhHHHHHH---h---CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceE--EEcCCCCHHHHHHHHHHHHHH
Q 007627 255 ITGFAETGEALV---S---SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF--IVCDDVDVPHVAQIAVRAALQ 326 (595)
Q Consensus 255 v~g~~~~~~~L~---~---~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~--IV~~daDl~~aa~~i~~~~f~ 326 (595)
+ |+...-.+|. + .+|+|+=-|..=|..+=..-...-.+- -+-|-+=+ |-|++||.+..|..++.-+=+
T Consensus 171 v-GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEH 246 (412)
T PF00815_consen 171 V-GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID---MIAGPSEVLVIADETANPEFVAADLLAQAEH 246 (412)
T ss_dssp ---HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES---------EEEEEE-TTS-HHHHHHHHHHHHTT
T ss_pred c-ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC---CCCCCCceEEEECCCCCHHHHHHHHHHHhcc
Confidence 2 4344334442 2 899999888765432111111110111 12333333 334569999888877765543
Q ss_pred cCCCCCCCCceEEEccc--hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCC
Q 007627 327 SSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404 (595)
Q Consensus 327 n~GQ~C~a~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~ 404 (595)
... + .-++|..+ ..++..+.+.+.++.+. + .+.++.+.+.|
T Consensus 247 d~~----a-~~vLvt~s~~la~~V~~~v~~~l~~l~------------------r----~~i~~~sl~~g---------- 289 (412)
T PF00815_consen 247 DPD----A-QAVLVTTSEELAEAVEAEVERQLEELP------------------R----REIAEKSLENG---------- 289 (412)
T ss_dssp -TT------EEEEEES-HHHHHHHHHHHHHHHTT-T------------------T----HHHHHHHHTT-----------
T ss_pred CCC----C-ceEEEECCHHHHHHHHHHHHHHHHhCC------------------c----hHHHHHHHHCC----------
Confidence 332 2 23444433 33444444444333321 0 11222222111
Q ss_pred CCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc-cC
Q 007627 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CG 483 (595)
Q Consensus 405 ~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~-~G 483 (595)
.++.++|++||++++|.-- +=-..|.++|. +.+..+++ +|
T Consensus 290 -----------------------------------~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~---~~~~~~i~~AG 330 (412)
T PF00815_consen 290 -----------------------------------AIIVVDSLEEAIELANEYA-PEHLELQVEDP---EELLEKIRNAG 330 (412)
T ss_dssp -----------------------------------EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHGGG--S-S
T ss_pred -----------------------------------eEEEECCHHHHHHHHHHhh-HHHHHHHHcCH---HHHHHHhhccC
Confidence 2455689999999999832 12467777775 45666664 89
Q ss_pred CeeecCCCc-------ccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 484 VAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 484 ~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
.|++..+.. ...++.+|- +|..|+.|.-+...|...-++.
T Consensus 331 aiFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 331 AIFLGEYTPEALGDYAAGPNHVLPT-----GGTARFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp EEEESTT--HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEEE
T ss_pred hhhcCCCCCHHHhhhccCCCccCCC-----CccccccCCCcHHHccceeeEE
Confidence 999997521 112344565 4678888888888887766553
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.69 E-value=7.5 Score=41.75 Aligned_cols=255 Identities=17% Similarity=0.219 Sum_probs=135.7
Q ss_pred ccccceEEEecceEEEEEcC---cchhhHhhHHHHHHHHhcCCEEEEe--cCCCchhHHHHHHHHHHHHHHhcCCCCCcE
Q 007627 178 IHKKAKVEFHPLGVVGAIVS---WNYPFHNIFNPMLAAVFSGNGIVIK--VSENASWSGCFYFRIIQAALAAVGAPENLV 252 (595)
Q Consensus 178 ~~~~~~v~~~PlGVV~~I~p---~N~P~~~~~~~l~~ALaaGN~VVlK--ps~~~p~s~~~l~~~~~~~l~~aGlp~g~v 252 (595)
.+.....++.|+--|++-.| --||-. .+...+||-.||+.=|+- |....-.....++ +...+|..+ ++
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypSt-vLM~avPAkvAGv~~Iv~~tPp~~~gv~p~iL~-----AA~~~Gv~e-Iy 178 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPST-VLMNAVPAKVAGVEEIVVVTPPPKDGVNPEILA-----AARLAGVDE-VY 178 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHH-HHHhhccHhhcCCceEEEECCCCCCCCCHHHHH-----HHHHhCcHH-HH
Confidence 34566788999999999999 566654 455567999999854443 4433111111111 122466654 22
Q ss_pred EeeeCChhHHHHHHh------CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEE-cCCCCHHHHHHHHHHHHH
Q 007627 253 DVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV-CDDVDVPHVAQIAVRAAL 325 (595)
Q Consensus 253 ~vv~g~~~~~~~L~~------~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV-~~daDl~~aa~~i~~~~f 325 (595)
+ + |+...-.+|.- .+|+|+=-|..=|..+ +.--....-+=+..|-..-+|| ++++|.+.+|..++.-+=
T Consensus 179 ~-v-GGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAE 254 (425)
T COG0141 179 K-V-GGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVSGVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAE 254 (425)
T ss_pred H-c-cCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhhCCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhh
Confidence 2 2 44444455542 8999988887654221 1111111222222333333444 344999998877765443
Q ss_pred HcCCCCCCCCceEEEccc--hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHH-hcCCeEeecCC
Q 007627 326 QSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL-DKGAEILARGS 402 (595)
Q Consensus 326 ~n~GQ~C~a~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~-~~Ga~vl~gG~ 402 (595)
+. -.+ +.|+|..+ ..++..+.+.+.++.+. + . +.+..+. +.|
T Consensus 255 Hd----~~a-~aiLvT~s~~la~~v~~~v~~~l~~l~----------------~--~----ei~~~~l~~~g-------- 299 (425)
T COG0141 255 HD----PDA-QAILVTDSEELAEAVEAAVERQLETLP----------------R--A----EIARKALENYG-------- 299 (425)
T ss_pred cC----CCc-eEEEEeCcHHHHHHHHHHHHHHHHhcc----------------H--H----HHHHHHHHhCC--------
Confidence 32 233 34444443 33444444444333321 1 1 1222221 111
Q ss_pred CCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc-
Q 007627 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ- 481 (595)
Q Consensus 403 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~- 481 (595)
.|+-++|++||++++|..- +=-..|.++|. +.++.+++
T Consensus 300 -------------------------------------~iilv~~l~ea~~~~N~~A-PEHLei~~~~p---~~~l~~I~n 338 (425)
T COG0141 300 -------------------------------------AIILVDDLDEAVEISNEYA-PEHLELQTENP---RELLGKIRN 338 (425)
T ss_pred -------------------------------------eEEEECCHHHHHHHHHhhC-hHhhhhhhcCH---HHHHHHhcc
Confidence 2455689999999999832 12355667765 45667775
Q ss_pred cCCeeecCCCccc-------ccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 482 CGVAAINDFASNY-------MCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 482 ~G~v~IN~~~~~~-------~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|.|+++.+..-. .++-+|- +|+-|+.+.-++..|...
T Consensus 339 AGsIFlG~~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L~v~dF~K~ 383 (425)
T COG0141 339 AGSIFLGHYSPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKR 383 (425)
T ss_pred cceeeecCCCCccccccccCCCccCCC-----CccchhcCCccHHHhhhH
Confidence 8999999853211 1223333 566666666666665543
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.23 Score=61.01 Aligned_cols=99 Identities=12% Similarity=0.151 Sum_probs=72.3
Q ss_pred ccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeC
Q 007627 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257 (595)
Q Consensus 178 ~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g 257 (595)
.|.+|.....|.|+|+++++-.- ..+.+++++|++||.+|+..++.. .. ++ +++|+.+.+.+.-
T Consensus 1177 TGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~~---~~----~~------~~Lp~~v~~~v~~ 1240 (1318)
T PRK11809 1177 TGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDALH---RA----LV------AALPAAVQARIQL 1240 (1318)
T ss_pred CCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCchh---HH----HH------HhccHHHHhHhhh
Confidence 46889999999999999987332 588999999999999998755432 11 11 3478888776522
Q ss_pred ChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCc
Q 007627 258 FAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTP 294 (595)
Q Consensus 258 ~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~p 294 (595)
. ....+.. .++.|.|-|.....+.+.++.+++--|
T Consensus 1241 ~--~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~Ga 1276 (1318)
T PRK11809 1241 A--KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGP 1276 (1318)
T ss_pred c--cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCC
Confidence 1 1122223 799999999999999999888776433
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.67 E-value=12 Score=40.30 Aligned_cols=257 Identities=16% Similarity=0.174 Sum_probs=138.7
Q ss_pred cccceEEEecceEEEEEcCc-chhh-HhhHHHHHHHHhcCCEEEEecCCCch--hHHHHHHHHHHHHHHhcCCCCCcEEe
Q 007627 179 HKKAKVEFHPLGVVGAIVSW-NYPF-HNIFNPMLAAVFSGNGIVIKVSENAS--WSGCFYFRIIQAALAAVGAPENLVDV 254 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~-N~P~-~~~~~~l~~ALaaGN~VVlKps~~~p--~s~~~l~~~~~~~l~~aGlp~g~v~v 254 (595)
+.....++.|+--|++-.|. .+|+ ++.+...+||-.||..=|+-.+|-.. .....++ +.+.+|..+ +--
T Consensus 101 gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-----Aa~~~Gv~e--Iy~ 173 (416)
T PRK13770 101 SVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLA-----ACYITQVNQ--VFQ 173 (416)
T ss_pred CcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHH-----HHHHcCCCe--eec
Confidence 34456789999999999995 3343 24556678999999865554443211 1111121 123467754 221
Q ss_pred eeCChhHHHHHH---h---CCCEEEEeCChhHHHHHHHHhhcCCCcEeec-CCCcceE-EE-cCCCCHHHHHHHHHHHHH
Q 007627 255 ITGFAETGEALV---S---SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAF-IV-CDDVDVPHVAQIAVRAAL 325 (595)
Q Consensus 255 v~g~~~~~~~L~---~---~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lE-lGGk~p~-IV-~~daDl~~aa~~i~~~~f 325 (595)
+ |+...-.+|. + .+|+|+=-|..=|..+=..... .|-.. +-|-+=+ || +++||.+..|..++.-+=
T Consensus 174 i-GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAE 248 (416)
T PRK13770 174 V-GGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG----QVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAE 248 (416)
T ss_pred c-CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----CcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhc
Confidence 2 4444444443 2 8999987776644221111111 11111 1233333 33 445999988888775443
Q ss_pred HcCCCCCCCCceEEEcc--chHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCC
Q 007627 326 QSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403 (595)
Q Consensus 326 ~n~GQ~C~a~~rv~V~~--~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~ 403 (595)
+.. .+ +-++|.. +..++..+++.+.+..+. + .+.++.+.++
T Consensus 249 Hd~----~a-~~iLvT~s~~la~~V~~ev~~ql~~lp----------------r------~~i~~~al~~---------- 291 (416)
T PRK13770 249 HDE----LA-RTYVISEDAQVLKDLESRIAKALPNVD----------------R------YDIVSKSIAN---------- 291 (416)
T ss_pred cCC----CC-cEEEEeCCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHh----------
Confidence 322 12 3344433 444555555555544431 0 1222222211
Q ss_pred CCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 007627 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 482 (595)
Q Consensus 404 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~-~ 482 (595)
+| .++-++|+|||++++|.--- =-..|.++|. +.+..+++ +
T Consensus 292 -------------------------------~g---~ii~v~~~eeai~~~N~~AP-EHLel~~~~~---~~~l~~i~nA 333 (416)
T PRK13770 292 -------------------------------QH---YLIHASNFDEACHVMNTIAP-EHASIQTVNP---QPYIEKVKYV 333 (416)
T ss_pred -------------------------------CC---EEEEECCHHHHHHHHHhhCh-HhheehhCCH---HHHHhhCCEe
Confidence 01 23456899999999998421 1245667765 56667775 8
Q ss_pred CCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 483 GVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 483 G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
|.|++..+..- ..++.+|- +|..|+.+.-+...|...-++
T Consensus 334 GaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 380 (416)
T PRK13770 334 GALFIGHYSPEVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNTV 380 (416)
T ss_pred ceeccCCCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHeecceee
Confidence 99999765221 12334454 467778777778887765554
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=91.28 E-value=25 Score=38.18 Aligned_cols=256 Identities=18% Similarity=0.172 Sum_probs=137.7
Q ss_pred cccceEEEecceEEEEEcCc---chhhHhhHHHHHHHHhcCCEEEE--ecCCC-chhHHHHHHHHHHHHHHhcCCCCCcE
Q 007627 179 HKKAKVEFHPLGVVGAIVSW---NYPFHNIFNPMLAAVFSGNGIVI--KVSEN-ASWSGCFYFRIIQAALAAVGAPENLV 252 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~---N~P~~~~~~~l~~ALaaGN~VVl--Kps~~-~p~s~~~l~~~~~~~l~~aGlp~g~v 252 (595)
+.....++.|+.-|++-+|. -||- +.+..++||-.||..=|+ -|... .......++ +.+.+|..+ |
T Consensus 111 Gv~~g~~~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-----AA~~~Gv~e--I 182 (431)
T PLN02926 111 GVRCRRVARPIGAVGLYVPGGTAVLPS-TALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-----CAKKAGVTH--I 182 (431)
T ss_pred CeEEEEEEechHHeeEeccCCCCCccH-HHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-----HHHHcCCCe--e
Confidence 44556789999999999997 3554 455567899999985444 44421 011122222 123477754 2
Q ss_pred EeeeCChhHHHHHHh------CCCEEEEeCChhHHHHHHHHhhcCCCc--Eeec-CCCcceEEE--cCCCCHHHHHHHHH
Q 007627 253 DVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTP--VTLE-LGGKDAFIV--CDDVDVPHVAQIAV 321 (595)
Q Consensus 253 ~vv~g~~~~~~~L~~------~vd~I~ftGS~~~g~~v~~~aa~~l~p--v~lE-lGGk~p~IV--~~daDl~~aa~~i~ 321 (595)
--+ |+...-.+|.- ++|+|+=-|..=|..+=..... .+ |-.. +-|-+=++| +++||-+.+|..++
T Consensus 183 y~v-GGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G---~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLL 258 (431)
T PLN02926 183 LKA-GGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQN---SEAMVSIDMPAGPSEVLVIADKTANPVHVAADLL 258 (431)
T ss_pred ecc-CCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhC---CCCccccCCCCCCceeEEEeCCCCCHHHHHHHHH
Confidence 112 44444444432 8999988887654221111111 10 1111 123333333 33489998888776
Q ss_pred HHHHHcCCCCCCCCceEEEccc--hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEee
Q 007627 322 RAALQSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399 (595)
Q Consensus 322 ~~~f~n~GQ~C~a~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~ 399 (595)
.-+=+.. .+ .-++|..+ ..++..+.+.+.++.+. + .+..+.+.+.|
T Consensus 259 aQAEHdp----~a-~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~g----- 306 (431)
T PLN02926 259 SQAEHGP----DS-QVVLVAVGDVDLDAIEEEVEKQCQSLP----------------R------GEIASKALGHS----- 306 (431)
T ss_pred HHhccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHCC-----
Confidence 5443322 22 33444333 33444444444443331 0 11222222111
Q ss_pred cCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHH
Q 007627 400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479 (595)
Q Consensus 400 gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~ 479 (595)
.|+-++|+|||++++|.-- +=-..|.++|. +.+..+
T Consensus 307 ----------------------------------------~iivv~~l~ea~~~~N~~A-PEHLei~~~~~---~~~l~~ 342 (431)
T PLN02926 307 ----------------------------------------FIVVARDMAEAISFSNLYA-PEHLIVNVEDA---ESWLDK 342 (431)
T ss_pred ----------------------------------------EEEEECCHHHHHHHHHhhC-hHhheehhcCH---HHHHhh
Confidence 2455689999999999832 12345777765 556667
Q ss_pred hc-cCCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 480 IQ-CGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 480 l~-~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
++ +|.|++..+... ..++.+|- +|.+|+.|.-+...|...-++
T Consensus 343 i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 393 (431)
T PLN02926 343 IDNAGSVFLGRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 393 (431)
T ss_pred cCccceeccCCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceeeE
Confidence 75 899999764221 11334454 467788887788887765444
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.64 E-value=28 Score=37.72 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=138.1
Q ss_pred cccceEEEecceEEEEEcCc---chhhHhhHHHHHHHHhcCCEEEEecCCC--chhHHHHHHHHHHHHHHhcCCCCCcEE
Q 007627 179 HKKAKVEFHPLGVVGAIVSW---NYPFHNIFNPMLAAVFSGNGIVIKVSEN--ASWSGCFYFRIIQAALAAVGAPENLVD 253 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~---N~P~~~~~~~l~~ALaaGN~VVlKps~~--~p~s~~~l~~~~~~~l~~aGlp~g~v~ 253 (595)
+.....++.|+--|++-.|. -||- +.+...+||-.||..=|+-.+|- .......++ +.+.+|..+ +-
T Consensus 111 Gv~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~-----AA~~~Gv~e--Iy 182 (425)
T PRK00877 111 GVRLGQRWRPIERVGLYVPGGKAAYPS-SVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILA-----AAALAGVDE--VY 182 (425)
T ss_pred CeEEEEEEEehHHeEEEccCCCCCchH-HHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-----HHHHcCCCe--ee
Confidence 34455789999999999996 3554 45556789999998655443332 111111121 123477754 22
Q ss_pred eeeCChhHHHHHHh------CCCEEEEeCChhHH--HHHHHHhhcCCCcEeec-CCCcce-EEE-cCCCCHHHHHHHHHH
Q 007627 254 VITGFAETGEALVS------SVDKIIFVGSPGVG--RMIMRNASKTLTPVTLE-LGGKDA-FIV-CDDVDVPHVAQIAVR 322 (595)
Q Consensus 254 vv~g~~~~~~~L~~------~vd~I~ftGS~~~g--~~v~~~aa~~l~pv~lE-lGGk~p-~IV-~~daDl~~aa~~i~~ 322 (595)
-+ |+...-.+|.- .+|+|+=-|..=|. |... .. .|-.. +-|-+= +|| +++||.+.+|..++.
T Consensus 183 ~v-GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v--~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLa 255 (425)
T PRK00877 183 KV-GGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLV--FG----VVGIDMIAGPSEILVIADETADPDFVAADLLS 255 (425)
T ss_pred cc-CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHH--cC----CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 12 44444445532 89999888876442 2211 11 11111 123333 333 334899988887775
Q ss_pred HHHHcCCCCCCCCceEEEcc--chHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeec
Q 007627 323 AALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (595)
Q Consensus 323 ~~f~n~GQ~C~a~~rv~V~~--~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~g 400 (595)
-+=+.. . .+-++|.. +..++..+.+.+.+..+. + .+.++.+.++
T Consensus 256 QAEHd~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~ia~~sl~~------- 301 (425)
T PRK00877 256 QAEHDP----D-AQSILVTTSEELAEAVAAEVERQLATLP----------------R------AEIARASLEG------- 301 (425)
T ss_pred HhccCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHh-------
Confidence 543322 1 23344433 344444444444443331 0 1222222211
Q ss_pred CCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh
Q 007627 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (595)
Q Consensus 401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l 480 (595)
+| .|+-++|+|||++++|.-- +=-..|.++|. +.+..++
T Consensus 302 ----------------------------------~g---~iivv~~leeai~~~N~~A-PEHLel~~~~p---~~~l~~I 340 (425)
T PRK00877 302 ----------------------------------QG---AIILVDDLEEAIELSNAYA-PEHLEIQTEDP---RALLDRI 340 (425)
T ss_pred ----------------------------------CC---EEEEECCHHHHHHHHHhhC-hHheeehhCCH---HHHHhhc
Confidence 11 2345689999999999832 12345777775 4566666
Q ss_pred c-cCCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 481 Q-CGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 481 ~-~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
+ +|.|++..+..- ..++.+|- +|..|+.+.-+.+.|...-++
T Consensus 341 ~nAGaiFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~F~K~~s~ 390 (425)
T PRK00877 341 RNAGAIFLGPYTPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSSV 390 (425)
T ss_pred CccceeccCCCCchhhhhcccCCCcccCC-----CcceeecCCccHHHhccceeE
Confidence 4 899999765221 12334444 567888888888888765554
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.25 E-value=31 Score=37.46 Aligned_cols=257 Identities=17% Similarity=0.185 Sum_probs=138.3
Q ss_pred cccceEEEecceEEEEEcCc-chhh-HhhHHHHHHHHhcCCEEEEecCCCch--hHHHHHHHHHHHHHHhcCCCCCcEEe
Q 007627 179 HKKAKVEFHPLGVVGAIVSW-NYPF-HNIFNPMLAAVFSGNGIVIKVSENAS--WSGCFYFRIIQAALAAVGAPENLVDV 254 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~-N~P~-~~~~~~l~~ALaaGN~VVlKps~~~p--~s~~~l~~~~~~~l~~aGlp~g~v~v 254 (595)
+.....++.|+--|++-+|. .+|+ ++.+...+||-.||..=|+-.+|-.. .....++ +.+.+|..+ ++.
T Consensus 106 Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-----Aa~~~Gv~e-Iy~- 178 (426)
T PRK12447 106 GVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-----AMHLAGADE-IYV- 178 (426)
T ss_pred CeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-----HHHHcCCCe-ehh-
Confidence 34456789999999999995 3443 24555678999999865544333211 1122222 123467754 111
Q ss_pred eeCChhHHHHHH---h---CCCEEEEeCChhHHHHHHHHhhcCCCcEeecC-CCcce-EEE-cCCCCHHHHHHHHHHHHH
Q 007627 255 ITGFAETGEALV---S---SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDA-FIV-CDDVDVPHVAQIAVRAAL 325 (595)
Q Consensus 255 v~g~~~~~~~L~---~---~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lEl-GGk~p-~IV-~~daDl~~aa~~i~~~~f 325 (595)
-|+...-.+|. + .+|+|+=-|..=|..+=..... .|-..+ -|-+= +|| +++||.+..|..++.-+=
T Consensus 179 -vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAE 253 (426)
T PRK12447 179 -LGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG----RVGIDLFAGPTETLVIADDTADPELVATDLLGQAE 253 (426)
T ss_pred -cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhc
Confidence 24444444453 2 8999988887654221111111 111111 23333 333 344999988887775443
Q ss_pred HcCCCCCCCCceEEEcc--chHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCC
Q 007627 326 QSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403 (595)
Q Consensus 326 ~n~GQ~C~a~~rv~V~~--~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~ 403 (595)
+.. . ..-++|.. ++.++..+++.+.++.+. + .+.++.+.++
T Consensus 254 Hd~----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~---------- 296 (426)
T PRK12447 254 HGP----N-SPAVLITTSRKLAEEVLAEIERLLAILP----------------T------ADVASAAWRD---------- 296 (426)
T ss_pred cCC----C-CceEEEECCHHHHHHHHHHHHHHHHhCC----------------H------HHHHHHHHHh----------
Confidence 322 2 23344433 344555555544444331 1 1222222221
Q ss_pred CCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 007627 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 482 (595)
Q Consensus 404 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~-~ 482 (595)
+| .|+-++|++||++++|.-- +=-..|.++|. +.+..+++ +
T Consensus 297 -------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~~---~~~l~~i~nA 338 (426)
T PRK12447 297 -------------------------------YG---EVILCDDLEEMVAEADRYA-SEHVQVMTEDP---DWFLENMTNY 338 (426)
T ss_pred -------------------------------CC---EEEEECCHHHHHHHHHhhC-hHheeehhCCH---HHHHhhcCcc
Confidence 01 2344689999999999842 12345777775 55667775 8
Q ss_pred CCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 483 GVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 483 G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
|.|++..+..- ..++.+|- +|..|+.|.-+.+.|...-++
T Consensus 339 GaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 339 GALFLGERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred ceeccCCCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeE
Confidence 99999764221 11334454 567788887788887655443
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.02 E-value=29 Score=36.88 Aligned_cols=134 Identities=15% Similarity=0.040 Sum_probs=72.9
Q ss_pred cccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC
Q 007627 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 258 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 258 (595)
+.....++.|+-.|++-.|.-||- +.+...+||-.||..=|+-.+|-.......+. +.+.+|..+ +--+ |+
T Consensus 84 Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-----aa~~~Gv~e--Iy~v-GG 154 (368)
T PRK13769 84 GVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-----VAKELGVKG--VLAI-GG 154 (368)
T ss_pred CeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-----HHHHcCCCe--eecc-cC
Confidence 445567899999999999966654 55666789999998665554442111111122 123466654 2212 44
Q ss_pred hhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHH
Q 007627 259 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 323 (595)
Q Consensus 259 ~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~ 323 (595)
...-.++.. ++|+|+=.|..=|..+=...... .-+=+--|-..-+||-+++|.+.+|..++.-
T Consensus 155 AQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~--V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQ 219 (368)
T PRK13769 155 PHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQY--VGIDGIEGPTELVVYAEGVPPEVAVRGALAQ 219 (368)
T ss_pred HHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCC--cCCCCcCCCcceEEEcCCCCHHHHHHHHHHH
Confidence 443345554 88888877776542211111111 1111112333345555668877777666543
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=88.13 E-value=41 Score=36.11 Aligned_cols=256 Identities=18% Similarity=0.224 Sum_probs=139.5
Q ss_pred cccceEEEecceEEEEEcCcc---hhhHhhHHHHHHHHhcCCEEEEecCCCc---hhHHHHHHHHHHHHHHhcCCCCCcE
Q 007627 179 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGIVIKVSENA---SWSGCFYFRIIQAALAAVGAPENLV 252 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~N---~P~~~~~~~l~~ALaaGN~VVlKps~~~---p~s~~~l~~~~~~~l~~aGlp~g~v 252 (595)
+.....++.|+--|++-.|.- ||- +.+...+||-.||..=|+-.+|-. ......++ +.+.+|..+ +
T Consensus 79 Gv~~g~~~~Pi~rvGlYVPGG~a~~pS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-----AA~~~Gv~e--I 150 (393)
T TIGR00069 79 GVILGQRVRPLERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-----AAKLAGVDE--V 150 (393)
T ss_pred CeEEEEEEEEeheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-----HHHHcCCCe--e
Confidence 445567899999999999973 554 455557799999986554433321 11111222 123477754 1
Q ss_pred EeeeCChhHHHHHHh------CCCEEEEeCChhHHHHHHHHhhcCCCcEeecC-CCcceEEE--cCCCCHHHHHHHHHHH
Q 007627 253 DVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDAFIV--CDDVDVPHVAQIAVRA 323 (595)
Q Consensus 253 ~vv~g~~~~~~~L~~------~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lEl-GGk~p~IV--~~daDl~~aa~~i~~~ 323 (595)
-- .|+...-.+|.- .+|+|+=-|..=|..+ +..... .|-..+ -|-+=+.| +++||.+.+|..++.-
T Consensus 151 y~-vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~A--K~~v~g--~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQ 225 (393)
T TIGR00069 151 YK-VGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAA--KKLVFG--DVGIDMPAGPSEVLVIADETANPEFVAADLLSQ 225 (393)
T ss_pred hh-cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhcC--ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 11 244444444532 8999988887654221 111000 121111 23333333 3448999888877654
Q ss_pred HHHcCCCCCCCCceEEEcc--chHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecC
Q 007627 324 ALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401 (595)
Q Consensus 324 ~f~n~GQ~C~a~~rv~V~~--~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG 401 (595)
+=+.. .+ +-++|.. +..++..+.+.+.++.+. + .+..+.+.++.
T Consensus 226 AEHd~----~a-~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r----~~i~~~al~~~------- 271 (393)
T TIGR00069 226 AEHDP----DA-QAILVTTSEELAEAVQEEIERQLATLP------------------R----REIARKSLEDN------- 271 (393)
T ss_pred hccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC------------------h----HHHHHHHHHhC-------
Confidence 43322 22 3344433 455555555555554431 0 12223332210
Q ss_pred CCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc
Q 007627 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 481 (595)
Q Consensus 402 ~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~ 481 (595)
| .|+-++|++||++++|.-- +=-..|.++|. +.+..+++
T Consensus 272 ----------------------------------g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p---~~~l~~I~ 310 (393)
T TIGR00069 272 ----------------------------------G---AIILVDDLEEAIEISNDYA-PEHLELQTKNP---EELLPKIR 310 (393)
T ss_pred ----------------------------------C---EEEEECCHHHHHHHHHhhC-hHhheehhCCH---HHHHhhcC
Confidence 1 2344689999999999832 12244666665 55666775
Q ss_pred -cCCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 482 -CGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 482 -~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
+|.|++..+..- ..++.+|- +|..|+.+.-+.+.|...-++
T Consensus 311 nAGaiFlG~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~ 359 (393)
T TIGR00069 311 NAGSIFLGPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITV 359 (393)
T ss_pred ccceeccCCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeE
Confidence 899999765221 12334454 467788887788887765554
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=88.08 E-value=41 Score=36.11 Aligned_cols=258 Identities=17% Similarity=0.205 Sum_probs=136.0
Q ss_pred cccceEEEecceEEEEEcCcc-hhh-HhhHHHHHHHHhcCCEEEEecCCCch---hHHHHHHHHHHHHHHhcCCCCCcEE
Q 007627 179 HKKAKVEFHPLGVVGAIVSWN-YPF-HNIFNPMLAAVFSGNGIVIKVSENAS---WSGCFYFRIIQAALAAVGAPENLVD 253 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~N-~P~-~~~~~~l~~ALaaGN~VVlKps~~~p---~s~~~l~~~~~~~l~~aGlp~g~v~ 253 (595)
+.....++.|+--|++-.|.- +|+ ++.+...+||-.||..=|+-.+|-.+ .....+. +.+.+|..+ +-
T Consensus 83 G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-----aa~~~Gv~e--iy 155 (390)
T cd06572 83 GVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILA-----AAKLAGVDE--IY 155 (390)
T ss_pred CcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHH-----HHHHcCCcE--Ee
Confidence 456678899999999999964 443 24555678999999855444333210 1111111 123466654 21
Q ss_pred eeeCChhHHHHHHh------CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcce-EEE-cCCCCHHHHHHHHHHHHH
Q 007627 254 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA-FIV-CDDVDVPHVAQIAVRAAL 325 (595)
Q Consensus 254 vv~g~~~~~~~L~~------~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p-~IV-~~daDl~~aa~~i~~~~f 325 (595)
- -|+.....+|.- .+|+|+=.|..=|... +.......-+=+- -|-+= +|| +++||-+.++..++.-+=
T Consensus 156 ~-vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A--K~~v~g~V~ID~~-AGPSEvlIiAD~~A~p~~vAaDLLaQAE 231 (390)
T cd06572 156 K-VGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAA--KRLVSGDVGIDMP-AGPSEVLVIADETANPEFVAADLLSQAE 231 (390)
T ss_pred c-cCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH--HHHhcCCcCccCC-CCCceEEEEeCCCCCHHHHHHHHHhhhc
Confidence 1 244454444432 7999987776544221 1111000111111 23333 333 344899988877765433
Q ss_pred HcCCCCCCCCceEEEcc--chHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCC
Q 007627 326 QSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403 (595)
Q Consensus 326 ~n~GQ~C~a~~rv~V~~--~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~ 403 (595)
+. -.+ +-++|.. +..++..+.+.+.++.+. +. + .++.+..+
T Consensus 232 H~----~~a-~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r~--~----~~~~~~~~---------- 274 (390)
T cd06572 232 HD----PDS-QAILVTTSEELAEAVEEEVERQLAELP----------------RR--E----IAAKSLLD---------- 274 (390)
T ss_pred cC----CCC-eEEEEECCHHHHHHHHHHHHHHHHhCC----------------cH--H----HHHHHHHh----------
Confidence 22 122 2344433 344444444444444331 00 0 11111111
Q ss_pred CCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 007627 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 482 (595)
Q Consensus 404 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~-~ 482 (595)
+ -.++.++|.+||++++|..- +=-.-|.++|. ..+..+++ +
T Consensus 275 -------------------------------~---g~ii~~~~~~eai~~~N~~A-PEHLel~~~~~---~~~l~~i~nA 316 (390)
T cd06572 275 -------------------------------Y---GAIILVDDLEEAIELANEYA-PEHLELQTEDP---EELLEKIRNA 316 (390)
T ss_pred -------------------------------C---CEEEEECCHHHHHHHHHhhc-hhhheeHhcCH---HHHHhhCccc
Confidence 0 12455689999999999842 12456677775 44666664 8
Q ss_pred CCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 483 GVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 483 G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
|.|++..+..- ..++.+|.| |..|+.|.-+...|...-++
T Consensus 317 GsiFlG~~tp~a~GDY~aGpNHvLPT~-----G~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 317 GSIFLGPYTPEALGDYAAGPNHVLPTG-----GTARFYSGLSVDDFLKRITV 363 (390)
T ss_pred eEEeecCCCchhhhccccCCCCccCCC-----cceeecCCCCHHHheeccee
Confidence 99999875221 123455654 56777777777777765554
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.35 E-value=0.19 Score=54.52 Aligned_cols=143 Identities=14% Similarity=0.108 Sum_probs=100.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCcee---EEeeCCHHHHHH
Q 007627 376 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP---IMKFNTDEEVVK 452 (595)
Q Consensus 376 ~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~---v~~~~~~~eAi~ 452 (595)
+..+..++...+.+.+++++.++..++. .+.|-.+.++...|++...+.++- |++..- .....+..+.+.
T Consensus 80 ~~~~R~~~L~~~Adlie~~~~~lA~~E~-----~d~GKp~~~a~~~Dl~~~~~~~ry--~ag~ad~~~~~~~~~~~~~~~ 152 (501)
T KOG2450|consen 80 DAAERGRLLRKLADLIEQDADVLAALEV-----LDNGKPYPEALVSDLPPAIDCFRY--YAGWADKIHGSTIPTDGEFFA 152 (501)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHhhhcc-----cccCCcchhhhhcCchhhhhHHHh--hccchhhcccccCCCCCceEE
Confidence 6788899999999999999988887774 457888999998899888777664 444442 334455678888
Q ss_pred HhhcCCCC--ceeEEec-CcHHHHHHHHHHhccCCeeecCCCccccc------CCCCCCCcC------CCCCCCCCcHHH
Q 007627 453 LANDSRYG--LGCAVFS-GSQHRAREIAAQIQCGVAAINDFASNYMC------QSLPFGGVK------DSGFGRFAGVEG 517 (595)
Q Consensus 453 ~aN~~~~g--L~asVft-~d~~~~~~~~~~l~~G~v~IN~~~~~~~~------~~~PfGG~~------~SG~G~~~G~~g 517 (595)
+.+..|.| -..+.|. .=.-.+-+++-.|.+|+++||-+...... .-...-|+. -+|+|...|..-
T Consensus 153 yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al 232 (501)
T KOG2450|consen 153 YTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAAL 232 (501)
T ss_pred EecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHH
Confidence 99999999 5566665 33456788999999999999987443211 111222222 368888777765
Q ss_pred Hhccceee
Q 007627 518 LRACCLVK 525 (595)
Q Consensus 518 l~~~t~~k 525 (595)
..++-..|
T Consensus 233 ~sH~dv~k 240 (501)
T KOG2450|consen 233 ASHPDVDK 240 (501)
T ss_pred hhCCCCce
Confidence 55544444
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 595 | ||||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-60 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 2e-58 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 1e-57 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 1e-57 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 6e-57 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 6e-56 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 1e-54 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 7e-54 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 4e-53 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 6e-53 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 9e-53 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 3e-52 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-52 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 5e-52 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 9e-52 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-51 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-51 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-51 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-51 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-51 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-50 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 3e-50 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 8e-49 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 9e-49 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-48 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-48 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-48 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-48 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 4e-48 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 5e-48 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-47 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-47 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-47 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 3e-47 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 9e-47 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 1e-46 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 1e-46 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-46 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-46 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-46 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 2e-46 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 4e-46 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 4e-46 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 8e-46 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-45 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 6e-45 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 7e-45 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-44 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-44 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-44 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-43 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 3e-43 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 4e-43 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 5e-42 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-41 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 5e-41 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-40 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 3e-40 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 5e-40 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 8e-40 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 1e-39 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 1e-39 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 7e-39 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-38 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 6e-37 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 8e-35 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 2e-32 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 3e-32 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-32 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 5e-31 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-29 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 8e-29 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-28 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-28 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-26 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 2e-25 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 7e-25 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 3e-23 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 4e-23 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 3e-22 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-21 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 4e-15 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 9e-13 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-12 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-12 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 1e-04 |
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 363 bits (934), Expect = e-120
Identities = 125/485 (25%), Positives = 194/485 (40%), Gaps = 40/485 (8%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
S+ P + S A+VD A+KAQ WA + +R +
Sbjct: 22 VEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRA 81
Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSG 174
+ + EH+E I E +++G T A EI S + + P
Sbjct: 82 AELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPGRVHGRISPSNTPGK 140
Query: 175 RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSG 231
+ +++ GVVG I WN+P + P LA GN +VIK + + +G
Sbjct: 141 ENRVYRV------AKGVVGVISPWNFPLNLSIRSVAPALAV---GNAVVIKPASDTPVTG 191
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNA 288
I G P ++ + G G+ V+ I F GS VGR + A
Sbjct: 192 ---GVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELA 248
Query: 289 --SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHR 342
+ V LELGG F+V D D+ A +AA GQ C R V
Sbjct: 249 INGGPMKTVALELGGNAPFVVLADADI----DAAAQAAAVGAFLHQGQICMSINRVIVDA 304
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
++ F+ + + VK++ G P A +G + L+ + A +GA + G
Sbjct: 305 AVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP 364
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
+ P V +V M++ +EE FGP++ ++K + + +LAN S +GL
Sbjct: 365 IE-------GRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLS 417
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522
AV+S RA + A QI G+ IND N + FGG K+SG GRF G +
Sbjct: 418 AAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPH-VMFGGSKNSGLGRFNGDWAIEEFT 476
Query: 523 LVKSV 527
+ +
Sbjct: 477 TDRWI 481
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 358 bits (921), Expect = e-118
Identities = 140/479 (29%), Positives = 222/479 (46%), Gaps = 25/479 (5%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
T + T+ PAT + L P + E++ ++ A K W +S QR Q LR +
Sbjct: 2 TMMTATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIG 61
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ + H E + + +R+ GK + A E+ + W G L PE
Sbjct: 62 QALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVE---- 116
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+++A +E+ PLGV+ AI+ WN+P + P+L A GN ++K + N +
Sbjct: 117 NQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLA---GNSYLLKHAPNVTGCA---- 169
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
++I LA G P + + E +++ + + GS G I A L
Sbjct: 170 QMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALK 229
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
LELGG D FIV +D D+ + AV Q++GQ CA A+RF V I F +
Sbjct: 230 KCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFV 289
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
++ G PL + D+G + + ++L V ++ +GA +L G EG
Sbjct: 290 AAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGE-KIAGEGN--- 345
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
Y+ TV+ +V M ++E FGP+ I + LANDS +GL +F+ A
Sbjct: 346 YYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLA 405
Query: 474 REIAAQIQCGVAAINDF-ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531
E+AA+++CG IN + AS+ + FGGVK SGFGR GL C V++V ++R
Sbjct: 406 AEMAARLECGGVFINGYSASD---ARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 356 bits (917), Expect = e-117
Identities = 122/465 (26%), Positives = 209/465 (44%), Gaps = 25/465 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P T + + + ++DE + A K W R + L + + EH++ + +
Sbjct: 11 PYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAK 70
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ + + GK + ++ E+ + G + LKP +S A G
Sbjct: 71 MMTLEMGKLLSES-KEEVELCVSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTG 125
Query: 191 VVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
V+ A WN+P + + P GN I++K + N S +II+ A GA
Sbjct: 126 VIMACEPWNFPLYQVIRVFAPNFIV---GNPILLKHAHNVPGSAALTAKIIKRA----GA 178
Query: 248 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
PE + + + +++ + + GS G + A K L T+ELGG DAF
Sbjct: 179 PEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAF 238
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
IV DD D + + A + GQ C ++R V + Y + ++ + ++ AG PL
Sbjct: 239 IVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPL 298
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
+ + + EKL+ V +A+D GA++ + S+GA +F PT++ ++
Sbjct: 299 EADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYP-EIDSKGA---FFRPTILTDIAK 354
Query: 426 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 485
+ +E FGPI + D ++LANDS YGLG +V RA++++AQI+ G+
Sbjct: 355 DNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMT 414
Query: 486 AINDF-ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 529
IN ++ LPFGG+K SG+GR GL A V++
Sbjct: 415 VINGRWITS---GELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 352 bits (906), Expect = e-115
Identities = 146/482 (30%), Positives = 238/482 (49%), Gaps = 31/482 (6%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLR 115
P + ++ PAT +Y+G P + A+VD VA AR A W + +R +
Sbjct: 18 TKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIA 77
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYRSS 173
+K + E ++L ++ + +TG+ M + + + +K W + S
Sbjct: 78 AAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSY 137
Query: 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWS 230
G+S++ ++ P+GVVGAIV+WN P N P L A G IV+K + +
Sbjct: 138 GQSIVSRE------PVGVVGAIVAWNVPLFLAVNKIAPALLA---GCTIVLKPAAETPLT 188
Query: 231 GCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
+ G PE ++ V+ G ETG+AL S+ +D F GS VGR + R A
Sbjct: 189 ANALAEVFAEV----GLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
++ L P TLELGGK A I+ +DVD+ + V + + ++GQ C R R Y
Sbjct: 245 AEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLS 407
V+ V V ++ GPP +G L + +++ + +++GA ++ G L
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLD 364
Query: 408 EGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466
G +F PTV +V++ M + QEE FGP++ I+ ++T+E+ + +ANDS YGL +V+
Sbjct: 365 NG----FFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVW 420
Query: 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 526
+ + +I+ QI+ G IN +A + PFGG K+SG GR G EG+ KS
Sbjct: 421 TTDVPKGIKISQQIRTGTYGINWYAFDP---GSPFGGYKNSGIGRENGPEGVEHFTQQKS 477
Query: 527 VV 528
V+
Sbjct: 478 VL 479
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 348 bits (894), Expect = e-114
Identities = 131/463 (28%), Positives = 203/463 (43%), Gaps = 41/463 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P + + ++++ A+KAQK WAKS+ + R+ L+ Y+ E+++ I
Sbjct: 29 PYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIM 88
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-----HKKAKVE 185
+ +R+TG T++ + E+ T + ++ G + K K+
Sbjct: 89 MIARETGGTIIKS-TIELEQTIAILDEAMTYT-------GELGGVKEVPSDIEGKTNKIY 140
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
PLGV+ +I +N+P + P +A GN +V K + SG II A
Sbjct: 141 RLPLGVISSISPFNFPMNLSMRSIAPAIAL---GNSVVHKPDIQTAISG---GTIIAKAF 194
Query: 243 AAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
G P +++V+ E G+ ++++ I F GS VGR I A + + LEL
Sbjct: 195 EHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALEL 254
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKI 355
GG + F V D DV AV AA+ GQ C R VH+D+Y FV +
Sbjct: 255 GGNNPFAVLSDADV----DRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTAR 310
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
VK + G K +G L EK ++ A G E+ G V
Sbjct: 311 VKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------RVGNVL 363
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
P V V ++ K+ Q E F PI I+K +D+E + +AND+ YGL AVF+ + +
Sbjct: 364 TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEK 423
Query: 476 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
A QI G+ +ND + N FGG K SG GRF +
Sbjct: 424 FALQIDSGMTHVNDQSVNDSPNI-AFGGNKASGVGRFGNPWVV 465
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 346 bits (889), Expect = e-113
Identities = 127/480 (26%), Positives = 214/480 (44%), Gaps = 31/480 (6%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
S ++ PAT + +G ++A+VD+ V A + +S K+R+ L +
Sbjct: 17 VESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKI 76
Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM 177
+K ++ I + + + G + + + + E R G +
Sbjct: 77 VKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERR--GDDL 134
Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFY 234
+ K+ +GV G I WN+P + AA G+ +V+K SE ++
Sbjct: 135 VVKE------AIGVSGLITPWNFPTNQTSLKLAAAFAA---GSPVVLKPSEETPFAAVIL 185
Query: 235 FRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT 291
I G P+ + +++ G A G L V + F GS G IM A+K
Sbjct: 186 AEIFDKV----GVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKD 241
Query: 292 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351
V+LELGGK +IV DDVD+ A+ + ++GQ C R V I F+++
Sbjct: 242 FKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAE 301
Query: 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEG 409
+ + V G P +G + + +++QN +N +++GAE+ G L +G
Sbjct: 302 LKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKG 361
Query: 410 AVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
YF PT+ +NV++ M + QEE FGP+M ++ +N +E +++AND++YGL V
Sbjct: 362 ----YFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGK 417
Query: 469 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
+ ++A I+ G IN+ PFGG K SG GR G G+ VKS+
Sbjct: 418 DKETLHKVARSIEAGTVEINEAGRKPDL---PFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 346 bits (889), Expect = e-113
Identities = 140/473 (29%), Positives = 216/473 (45%), Gaps = 41/473 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA+ LG PALS+ EV++ + A+ AQK+W +R L + E +E+I E
Sbjct: 34 PASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGE 93
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW--------LKPEYRSSGRSMIHKKA 182
+ + K A +GE+ T + I E + S +++ ++
Sbjct: 94 LIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVERE- 151
Query: 183 KVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
PLGVV AI +NYP I P L GN +V K + S SG +++
Sbjct: 152 -----PLGVVLAISPFNYPVNLAAAKIA-PALVT---GNTVVFKPATQGSLSG---IKMV 199
Query: 239 QAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
+A A GAPE ++ V+TG G+ LV +D I F G G I A + PV
Sbjct: 200 EALADA-GAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA--KMIPV 256
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
LELGGKD IV DD D+ A V A SGQ C +R +V + V+ + ++
Sbjct: 257 VLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKEL 316
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
V+ ++ G P D+ + + + +Q L++DAL+ GA +L+ +G
Sbjct: 317 VEQLTVGSPEDDA-DITPVIDEKSAAFIQGLIDDALENGATLLSGNK----RQGN---LL 368
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PT++ +V M++ EE FGP++PI++ E + L+N S YGL ++F+ RA
Sbjct: 369 SPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAIN 428
Query: 476 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
I ++ G IN + PF GVK SG G L + + V
Sbjct: 429 IGKHLEVGTVHINA-KTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 345 bits (888), Expect = e-113
Identities = 141/497 (28%), Positives = 218/497 (43%), Gaps = 44/497 (8%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
+ T + PAT + + A + A V+ +A A++AQK WA S R + L+
Sbjct: 26 DNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAAD 85
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH 179
+ E + + + + DTGK + + + + + + + + S ++
Sbjct: 86 IMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEF------------FGGIAPSALN 133
Query: 180 KK---AKVEFH-----PLGVVGAIVSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENA 227
+F PLGV I +WNYP I P L A GN +V K SEN
Sbjct: 134 GDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQ-QIACWKAAPALVA---GNAMVFKPSENT 189
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285
I+ A G P+ L +VI G +TG LV+ V K+ GS GR +
Sbjct: 190 PLGALKIAEILIEA----GLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVA 245
Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
A+ L VT+ELGGK IV DD D+ A+ SSGQ C+ R +V +
Sbjct: 246 AAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAK 305
Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-- 403
A F+ + + +++ G PL +G L EK+ + + +GA ++ G
Sbjct: 306 ARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPN 365
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463
EGA Y PTV +V M + +EE FGP+M ++ F+ ++EV+ AN + +GL
Sbjct: 366 NVAGEGA---YVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAG 422
Query: 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523
VF+ RA + ++ G IN + N +PFGG K SGFGR L
Sbjct: 423 GVFTADLARAHRVVDGLEAGTLWINTY--NLCPVEIPFGGSKQSGFGRENSAAALEHYSE 480
Query: 524 VKSV---VEDRWWPYIK 537
+K+V PY +
Sbjct: 481 LKTVYVSTGKVDAPYAE 497
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 341 bits (876), Expect = e-111
Identities = 154/479 (32%), Positives = 231/479 (48%), Gaps = 35/479 (7%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
SE +++ YEPA+ LG PA+S EVD A A+KAQ W S+ +R +L + +
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRS 176
+ +E I I S++ K A + E++ T E I + E GE + ++ +
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASK- 133
Query: 177 MIHKKAKVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGC 232
K A V P+G+V AI +NYP I P L A GN I K S SG
Sbjct: 134 --KKIAVVRREPVGLVLAISPFNYPVNLAGSKIA-PALIA---GNVIAFKPPTQGSISG- 186
Query: 233 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
+ +A A G P + + ITG E G+ +V V+ I F GS G+G I + A
Sbjct: 187 --LLLAEAFAEA-GLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243
Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
+ P+ LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V
Sbjct: 244 --MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301
Query: 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 409
++ + V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 302 EKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK----REG 356
Query: 410 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+
Sbjct: 357 N---LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTND 413
Query: 470 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
RA IA Q++ G IN+ + + PF G K SG G + A VKSVV
Sbjct: 414 FPRAFGIAEQLEVGTVHINN-KTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 340 bits (875), Expect = e-111
Identities = 127/457 (27%), Positives = 208/457 (45%), Gaps = 33/457 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P +++ + PALSR E E + A K ++V +R L + K I E +E + +
Sbjct: 19 PYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHP 188
I + D GK + A E+ + + + P
Sbjct: 79 ILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVK-------EHRDEVIPSDDRLIFTRREP 130
Query: 189 LGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
+G+VGAI +N+P H I P +A GN IV S A +II+ AL
Sbjct: 131 VGIVGAITPFNFPLNLSAHKI-APAIAT---GNVIVHHPSSKAPLVCIELAKIIENALKK 186
Query: 245 VGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
P + +++TG E G+ +V + V+ I F GS VG +I + A + LELGG
Sbjct: 187 YNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGG 244
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
+ IV D D+ ++ + +GQ C V I F+ K ++
Sbjct: 245 VNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNV 304
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
G PL K D+G L +EH+E ++ +V A+D+G ++L G F PT++
Sbjct: 305 GNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL- 356
Query: 422 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 481
V+ L + E F P++PI++ +EE++ +AN + YGL A+F+ +++ + A ++
Sbjct: 357 EVDRDNILCKTETFAPVIPIIRT-NEEEMIDIANSTEYGLHSAIFTNDINKSLKFAENLE 415
Query: 482 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
G IND +S + ++PFGGVK SG GR +
Sbjct: 416 FGGVVIND-SSLFRQDNMPFGGVKKSGLGREGVKYAM 451
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 338 bits (870), Expect = e-110
Identities = 156/503 (31%), Positives = 237/503 (47%), Gaps = 51/503 (10%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFL 114
P ++ PAT +G PA ++ +VD VA A+ A WA +S R ++L
Sbjct: 19 PVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYL 78
Query: 115 RILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEK 164
R + + E + + ++ S D GK + +A +I EK+ +
Sbjct: 79 RAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKL-----DAR- 131
Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVI 221
+ M K+ V P+GVVG I WNYP P LAA G ++
Sbjct: 132 ----QKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAA---GCAAIL 184
Query: 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSP 278
K SE AS + I + G P +++++TG E G L + VDK+ F GS
Sbjct: 185 KPSELASLTCLELGEICKEV----GLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSS 240
Query: 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338
G IM A++ + PV+LELGGK +V +DVD+ A+ A+ ++GQ C+ R
Sbjct: 241 ATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
+H I F++++ K +K++ PL +G + EK+ V++A +GA IL
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360
Query: 399 ARGS-FGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
GS HL +G +F PT+I +V M++ +EE FGP++ + F+T+EE + LAND
Sbjct: 361 TGGSRPEHLKKG----FFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLAND 416
Query: 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVE 516
+ YGLG AV S R + + G+ +N P+GGVK SGFGR G
Sbjct: 417 TVYGLGAAVISNDLERCERVTKAFKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEW 474
Query: 517 GLRACCLVKSVV----EDRWWPY 535
GL VK V E+ W Y
Sbjct: 475 GLDNYLSVKQVTQYISEEPWGWY 497
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 338 bits (869), Expect = e-110
Identities = 132/481 (27%), Positives = 223/481 (46%), Gaps = 32/481 (6%)
Query: 58 RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
P + + +P+T + S + D+ + A+KA + W +S +R F+ +
Sbjct: 35 DDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKI 94
Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYRSSGR 175
L+ + + + S + G + A + T I + ++ + + + +
Sbjct: 95 LEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQ 154
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGC 232
+++H +GVVG I WN+P + + P L A G +V+K SE A S
Sbjct: 155 AILHYD------AIGVVGLITPWNWPMNQVTLKVIPALLA---GCTMVLKPSEIAPLSAM 205
Query: 233 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
+ I+ A P + ++I G A G L + ++ I F GS G+ I +NAS
Sbjct: 206 LFAEILDEA----ALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261
Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
TL V LELGGK A I+ D D+ + + VR +SGQ+C R V + IY +
Sbjct: 262 NTLKRVCLELGGKGANIIFADADIDALQR-GVRHCFYNSGQSCNAPTRMLVEQAIYDKAI 320
Query: 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA--RGSFGHLS 407
I + GP +G + E +K+Q+L+ +D+GA ++ G +
Sbjct: 321 KTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGME 380
Query: 408 EGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466
G Y+ PTV +V M++ +EE FGP++ ++ FNT++E V LAND+ YGL +
Sbjct: 381 RG----YYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQ 436
Query: 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 526
S + + R IAAQ++ G+ +N FGGVK SG R G+ G++ K+
Sbjct: 437 SQDRSKCRRIAAQVRSGMVEVNGHELPG---GSYFGGVKFSGRAREGGLWGIKEFLDTKA 493
Query: 527 V 527
+
Sbjct: 494 I 494
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 337 bits (868), Expect = e-110
Identities = 146/478 (30%), Positives = 226/478 (47%), Gaps = 43/478 (8%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+EPAT + L EVD+ V A+ A W+K + +R + + + I E ++ I
Sbjct: 41 FEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNI 100
Query: 129 CEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMI 178
++ + GKT+ +A +I + G+ + G +
Sbjct: 101 AKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTL-----SGQ-----HIQLPGGAF- 148
Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENASWSGCFY 234
A PLGV I++WNYPF I P LA GN +V K S +G
Sbjct: 149 ---AYTRREPLGVCAGILAWNYPF-MIAAWKCAPALAC---GNAVVFKPSPMTPVTGVIL 201
Query: 235 FRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL 292
I A G P LV+V+ G AETG L +V K+ F GS G+ +M ++KT+
Sbjct: 202 AEIFHEA----GVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257
Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
VTLELGGK ++ D ++ + + A+ A + GQ C R +V R+I F+ +V
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
K K++ G PL + MG L +K+ V A +GA +L G S+ +
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 413 Q-YF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 470
YF P V+ N M ++EE FGP+M ++ F+T+EEV++ AN++ +GL VF+
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDI 437
Query: 471 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
RA +AA ++ G IN + + +PFGG K SGFGR G + +K+V+
Sbjct: 438 SRAHRVAANLEAGTCYINTY--SISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 337 bits (868), Expect = e-110
Identities = 123/487 (25%), Positives = 204/487 (41%), Gaps = 48/487 (9%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
+E + P T + S A++D V A +A W++++ +R LLK
Sbjct: 36 AGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERS---NALLK 92
Query: 120 Y---IIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWL 166
I + + + + + GK + E+ +
Sbjct: 93 IADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNL-----HAP--A 145
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKV 223
EY SMI + P+G+VG+I WNYP + P + GN +V K
Sbjct: 146 AGEYLPGHTSMIRRD------PIGIVGSIAPWNYPLMMMAWKLAPAIGG---GNTVVFKP 196
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGV 280
SE + R+I L PE +V+VITG ET G AL++ V + G
Sbjct: 197 SEQTPLTALKLARLIADIL-----PEGVVNVITGRGETVGNALINHPKVGMVSITGDIAT 251
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G+ ++ A+KT+ LELGGK IV D D+ V ++GQ+C A R Y
Sbjct: 252 GKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYA 311
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
IY V+ + V ++ + ++G L +++ + V A D+ +
Sbjct: 312 EAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITT 371
Query: 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460
G EG +F PTV+ ++++ E FGP++ + +F ++ V ANDS YG
Sbjct: 372 GGRTGSDEGF---FFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYG 428
Query: 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520
L +V++ +A A+++Q G IN + +P GG+K SG+G+ V L
Sbjct: 429 LASSVWTKDISKAMRAASRLQYGCTWINTH--FMLTNEMPHGGIKQSGYGKDMSVYALED 486
Query: 521 CCLVKSV 527
V+ +
Sbjct: 487 YTAVRHI 493
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 337 bits (866), Expect = e-110
Identities = 136/500 (27%), Positives = 213/500 (42%), Gaps = 57/500 (11%)
Query: 50 FI---YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSS 106
I + G Y PAT L S +VD V A A W +++
Sbjct: 27 LINGELVSGEGEK------QPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTT 80
Query: 107 FKQRRQFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTT----------CE 153
K R LLK I E+ ++ E+ SR+ GK + A EI
Sbjct: 81 PKVRA---ECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAAR 137
Query: 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPML 210
+ G EY SMI + PLGVV +I WNYP P L
Sbjct: 138 CL-----NGL--AAGEYLEGHTSMIRRD------PLGVVASIAPWNYPLMMAAWKLAPAL 184
Query: 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS-- 267
AA GN +V+K SE + + + P +V+++ G +T G+ L
Sbjct: 185 AA---GNCVVLKPSEITPLTALKLAELAKDIF-----PAGVVNILFGRGKTVGDPLTGHP 236
Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
V + GS G I+ + + ++ +ELGGK IV DD D+ V + +
Sbjct: 237 KVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYN 296
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
+GQ+C A R Y + IY V ++ V ++ +G P ++G L L H E++ V
Sbjct: 297 AGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAV 356
Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
+A G + G G Y+ PT++ ++Q+E FGP++ + F+ +
Sbjct: 357 EEAKATGHIKVITGGEKRKGNGY---YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 413
Query: 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDS 507
E+VV ANDS+YGL +V++ RA ++A++Q G +N + +P GG K S
Sbjct: 414 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTH--FMLVSEMPHGGQKLS 471
Query: 508 GFGRFAGVEGLRACCLVKSV 527
G+G+ + GL +V+ V
Sbjct: 472 GYGKDMSLYGLEDYTVVRHV 491
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 336 bits (863), Expect = e-109
Identities = 103/471 (21%), Positives = 193/471 (40%), Gaps = 34/471 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P + +VD V AR+A WA+ +QR + L + + +
Sbjct: 27 PVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELAR 86
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL--KPEYRSSGRSMIHKKAKVEFHP 188
+ +TGK + ++ E+ + K+ + + K + +++ K P
Sbjct: 87 VIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHK------P 139
Query: 189 LGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
GVV +N+P H P L A GN +V K SE + A
Sbjct: 140 HGVVAVFGPYNFPGHLPNGHIVPALLA---GNCVVFKPSELTPKVAELTLKAWIQA---- 192
Query: 246 GAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 302
G P +++++ G ETG AL + +D + F GS G ++ + + LE+GG
Sbjct: 193 GLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGN 252
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSA 361
+ +V + D+ +++A S+GQ C A R V + + ++++ + ++
Sbjct: 253 NPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRV 312
Query: 362 GPPLA-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
G MGA+ L +E L + KGA+ L + +GA P ++
Sbjct: 313 GRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMT--QPIDGA--ALLTPGIL 368
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+V+ + EE FGP++ +++++ ++ AN ++YGL + S S+ R + +
Sbjct: 369 -DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVES 427
Query: 481 QCGVAAIND--FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 529
+ G+ N + S PFGG+ SG R + C + +E
Sbjct: 428 RAGIVNWNKQLTGAAS---SAPFGGIGASGNHRPSAYYAADYCAYPVASLE 475
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 336 bits (865), Expect = e-109
Identities = 134/523 (25%), Positives = 230/523 (43%), Gaps = 52/523 (9%)
Query: 44 QTPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQAR 96
Q+ + + ++ P + + ++ + + + AR
Sbjct: 21 QSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAAR 80
Query: 97 KAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT--- 151
+A + W++ + + R + +R + I EH+E + + + DTGKT+ ++ ++
Sbjct: 81 RAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNV 139
Query: 152 -------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204
+K G + ++K+ P+GVV I WNYP
Sbjct: 140 FMYFAGLADKD-----GG--------EMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQ 186
Query: 205 IF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AE 260
P LA G +V+K SE + F +++ G P+ +++I G +E
Sbjct: 187 ASWKIAPALAT---GCSLVMKPSEITPLTTIRVFELMEEV----GFPKGTINLILGAGSE 239
Query: 261 TGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 318
G+ + VD + F G G+ IM+NA+ +T + LELGGK+ I+ DD D
Sbjct: 240 VGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVD 299
Query: 319 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 378
A+ +GQ C+ R V I F + VK + G +MG + E
Sbjct: 300 QALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTE 359
Query: 379 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438
H K+++ ++ A +GA I G + +F PTVI N + +M+++QEE FGP+
Sbjct: 360 HRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPV 419
Query: 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS 498
+ + F T++E ++LANDS YGL AVFS +A+ +A +++ G INDF +
Sbjct: 420 VTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDF--HPYFAQ 477
Query: 499 LPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDRWWPYIK 537
P+GG K SG GR G EGL + K ++ + K
Sbjct: 478 APWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWFSK 520
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 331 bits (851), Expect = e-107
Identities = 112/474 (23%), Positives = 188/474 (39%), Gaps = 39/474 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELIC 129
P + + + SR EV+ + K + +R LR I + ++
Sbjct: 39 PIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFA 98
Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW------LKPEYRSSGRSMIHKKAK 183
E+ + GK A +GE+ +++ + +K Y + + ++
Sbjct: 99 EVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRR-- 155
Query: 184 VEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
PLGVV AI +NYP + I GN +V+K S + + +
Sbjct: 156 ---EPLGVVAAITPFNYPLFDAVNKIT-YSFIY---GNAVVVKPSISDPLPAAMAVKALL 208
Query: 240 AALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
A G P + + ++ + E +V+ V + F GS VG +++ + +
Sbjct: 209 DA----GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG--GVKQYVM 262
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGG D IV +D D+ A R +GQ C + R +Y V +VAK +
Sbjct: 263 ELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS 322
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 417
S+ G P D+G L +++ + DA++KG +LA G G Y P
Sbjct: 323 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR----RLGP--TYVQP 376
Query: 418 TVI---VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 474
T + + M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 377 TFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIR 436
Query: 475 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
++ G IND + PFGG K SG R + A K++V
Sbjct: 437 RAVRLLEVGAIYIND-MPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 324 bits (834), Expect = e-105
Identities = 136/501 (27%), Positives = 219/501 (43%), Gaps = 34/501 (6%)
Query: 45 TPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARK 97
+ + + S K + PAT + L + +VD+ V AR+
Sbjct: 10 PAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQ 69
Query: 98 A---QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
A W +R + L L I + L+ + + + GK +A L ++ +
Sbjct: 70 AFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKT 129
Query: 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLA 211
+ + +K G P+GV G I+ WN+P P L+
Sbjct: 130 LRYCAGWADKIQGRTIPMDGNFF----TYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALS 185
Query: 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS-- 268
GN +V+K +E + +I+ A G P +V+++ G+ T G A+ S
Sbjct: 186 C---GNTVVVKPAEQTPLTALHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMD 238
Query: 269 VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
VDK+ F GS VG++I A K+ L V+LELGGK IV D D+ + + A +
Sbjct: 239 VDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYH 298
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
GQ C A R +V IY FV + + K G PL G E EK+ +L+
Sbjct: 299 QGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLI 358
Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
+GA++ G ++G + PTV +V M++ +EE FGP+ IMKF +
Sbjct: 359 ESGKKEGAKLECGGG-PWGNKGY---FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414
Query: 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDS 507
++V+K AN++ YGL +F+ +A +++ +Q G +N + + + PFGG K S
Sbjct: 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCY--SVVSAQCPFGGFKMS 472
Query: 508 GFGRFAGVEGLRACCLVKSVV 528
G GR G G VK+V
Sbjct: 473 GNGRELGEYGFHEYTEVKTVT 493
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 324 bits (833), Expect = e-104
Identities = 135/479 (28%), Positives = 206/479 (43%), Gaps = 45/479 (9%)
Query: 68 CYEPA-TMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEH 124
P + +G +P S +V + VA ARKA W + S +R + + + I+
Sbjct: 42 RVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101
Query: 125 QELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSG 174
QE + I S + GK + A GEI + EG+
Sbjct: 102 QEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARAL-----EGQ--THNNIGDDR 153
Query: 175 RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSG 231
++ ++ P+GVVG I WN+PF + + G +V+K SE S +
Sbjct: 154 LGLVLRE------PVGVVGIITPWNFPFIIASERVPWAIGS---GCTVVLKPSEFTSGTS 204
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
+ + A G P+ + +V+TG+ G+ L VD + F GS VG + A
Sbjct: 205 IRLAELAREA----GIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260
Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
++T+ V LELGGK IV D D+ A ++GQ C R V I
Sbjct: 261 ARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDAL 320
Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
+ ++ I + V+ G PL + +GA+ H+EK+ + V + GAE+L G
Sbjct: 321 MERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREA 380
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 468
G Y+ PTV V M + +EE FGP++ + F T +E V LAN + +GL +V+S
Sbjct: 381 G---LYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWST 437
Query: 469 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+ A + +I+ G IN LP GG K SG GR G G K V
Sbjct: 438 NLETALQTIRRIRAGRCWINSV--IDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 322 bits (828), Expect = e-104
Identities = 143/479 (29%), Positives = 213/479 (44%), Gaps = 27/479 (5%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA---QKVWAKSSFKQRRQFLRI 116
S P+T + + + +VD+ V AR A W + R + L
Sbjct: 31 AVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNR 90
Query: 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS 176
L I + + + + D GK V + L ++ + + + +K+ G
Sbjct: 91 LADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDF 150
Query: 177 MIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCF 233
+ P+GV G I+ WN+P P LA GN +V+KV+E + +
Sbjct: 151 F----SYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAT---GNVVVMKVAEQTPLTALY 203
Query: 234 YFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASK 290
+I+ A G P +V+++ GF T G A+ S VDK+ F GS +GR+I A
Sbjct: 204 VANLIKEA----GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259
Query: 291 T-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
+ L VTLELGGK I+ D D+ + A A + GQ R +V DIY FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFV 319
Query: 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 409
+ KS G P K + G +K+ +N +GA++L G G
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG-IAADRG 378
Query: 410 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469
+ PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+
Sbjct: 379 Y---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 435
Query: 470 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
+A ++ +Q G +N + + PFGG K SG GR G GL+A VK+V
Sbjct: 436 LDKANYLSQALQAGTVWVNCY--DVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 321 bits (826), Expect = e-103
Identities = 127/471 (26%), Positives = 211/471 (44%), Gaps = 24/471 (5%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQ 125
P + ++VD+ VA A++A +W K + + R + L L + +HQ
Sbjct: 56 TINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE 185
E + I + D G A + + + + +K + +
Sbjct: 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTK 175
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GV G ++ WNYP + LAA GN +VIK ++ + + + A
Sbjct: 176 KEPVGVCGIVIPWNYPLMMLSWKTAACLAA---GNTVVIKPAQVTPLTALKFAELTLKA- 231
Query: 243 AAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLE 298
G P+ +V+++ G G+ L V KI F GS VG+ IM++ + + V+LE
Sbjct: 232 ---GIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLE 288
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK I+ D D+ Q+ + + + G+NC A R +V I+ FV +V + V+
Sbjct: 289 LGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEK 348
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
+ G PL + G H KL + +GA ++ G+ G +F PT
Sbjct: 349 MKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN-QVPRPGF---FFQPT 404
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREI 476
V +V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A +
Sbjct: 405 VFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYV 464
Query: 477 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
+ ++Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 465 SDKLQAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 318 bits (818), Expect = e-102
Identities = 135/495 (27%), Positives = 219/495 (44%), Gaps = 48/495 (9%)
Query: 68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEH 124
+PAT + LG EVD A +A + W+++ K+R+ R LL+ I +H
Sbjct: 46 SLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERK---RYLLRIAELIEKH 102
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
+ + + D G+ + ++ E + E + R+ + +
Sbjct: 103 ADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAM------EDRTFPVDRDWL 155
Query: 185 EFH---PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
+ P G VG I WN P P LA GN +V+K +E + ++ I+
Sbjct: 156 YYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAF---GNTVVLKPAEWSPFTATKLAEIL 212
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
+ A P + +++ GF E G ALV+ V + G G+++MRNA+ L +
Sbjct: 213 KEA----DLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRL 268
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
+ ELGGK +V D D+ V +G+ C + R V I+ FV +V +
Sbjct: 269 SPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVER 328
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG-------SFGHLSE 408
+++ G PL + ++G L EH +++ V +GA +L G LS
Sbjct: 329 ARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSR 388
Query: 409 GAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467
G + PTV V NH MK+ QEE FGP++ + F +EE ++ AND++YGL VF+
Sbjct: 389 G----NYLLPTVFVGENH-MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFT 443
Query: 468 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
RA +A +++ G+ +N N PFGGVK SG R G L +K++
Sbjct: 444 RDLERAHRLALELEAGMVYLNSH--NVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI 501
Query: 528 VEDRWWPYIKTKIPK 542
P +PK
Sbjct: 502 ----ALPLRPPHVPK 512
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 318 bits (816), Expect = e-102
Identities = 112/513 (21%), Positives = 216/513 (42%), Gaps = 38/513 (7%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G +E K+Q + PA + +G ++ ++ + A +A + W + ++R
Sbjct: 44 GERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERA---N 100
Query: 116 ILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS 172
IL+K I + + GK +A + + + + + + + +
Sbjct: 101 ILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIELNRGKEIL 159
Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 232
S ++ + + P+GV I WN+ + +A + +GN +V+K +
Sbjct: 160 SRPG---EQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAA 216
Query: 233 FYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
+ +++ A G P+ +++ + G G+ LV I F GS VG + A+
Sbjct: 217 KFVEVLEDA----GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272
Query: 290 K------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
L V +E+GGKD +V D D+ A+ + +A SGQ C+ R +H+D
Sbjct: 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKD 332
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
+Y + + + K+++ G P MG + + EK+ + + +G ++ G
Sbjct: 333 VYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGE- 390
Query: 404 GHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
G S G +F PT+I +++ +MQEE FGP++ K N + +++AN++ YGL
Sbjct: 391 GDSSTG----FFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLT 446
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRAC 521
AV + ++ + + G N + + PFGG K SG + G + L
Sbjct: 447 GAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALH 506
Query: 522 CLVKSVVED----RWWPYIKTKIPKPIQYPVAE 550
K+V E ++ +P E
Sbjct: 507 MQAKTVSEMYAENLYFQSHHH--HHHWSHPQFE 537
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 314 bits (808), Expect = e-101
Identities = 135/466 (28%), Positives = 210/466 (45%), Gaps = 46/466 (9%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + P + + + A +AQ W +R +LR + I E I
Sbjct: 29 PATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISA 88
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVE 185
+ + GK A E+ T + I ++ GE + R ++ K+
Sbjct: 89 LIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGE--IIQSDRPGENILLFKR---- 141
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
LGV I+ WN+PF I P L GN IVIK SE + I A +
Sbjct: 142 --ALGVTTGILPWNFPFFLIARKMAPALLT---GNTIVIKPSEFTPNNA-----IAFAKI 191
Query: 243 AA-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
+G P + +++ G G+ L + V + GS G IM A+K +T V LE
Sbjct: 192 VDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLE 251
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAK 354
LGGK IV DD D+ AV+A + S SGQ C AER YV + IY FV+++ +
Sbjct: 252 LGGKAPAIVMDDADLEL----AVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE 307
Query: 355 IVKSVSAGPPL-AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
+++V G P MG L E+++ V A+++GA + G +G
Sbjct: 308 AMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK-AVEGKG---Y 363
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
Y+PPT++++V M +M EE FGP++P++ F+T E+ + +ANDS YGL ++++ + + A
Sbjct: 364 YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVA 423
Query: 474 REIAAQIQCGVAAINDFA-SNYMCQSLPFGGVKDSGFGRFAGVEGL 518
+ ++ G IN G + SG G G GL
Sbjct: 424 MKAIKGLKFGETYINRENFEAMQG---FHAGWRKSGIGGADGKHGL 466
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 313 bits (804), Expect = e-100
Identities = 110/484 (22%), Positives = 197/484 (40%), Gaps = 31/484 (6%)
Query: 57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRI 116
G + Y PA + + S A+ +E V +AR+A K+WA +R + +R
Sbjct: 30 GSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQ 89
Query: 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS 176
+ + E +++ + S + GK +V+ +GE+ + + + G
Sbjct: 90 IGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSR-------MIGGPI 141
Query: 177 M----IHKKAKVEFHPLGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSG 231
+ +++P+G+VG I ++N+P N +A + GN + K + S
Sbjct: 142 LPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMI-CGNVCLWKGAPTTSLIS 200
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
+II L P + + G A+ G A+ V+ + F GS VG+ +
Sbjct: 201 VAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQ 260
Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIY 345
+ LELGG +A I +D D+ + V +AL + +GQ C A R ++H I+
Sbjct: 261 ERFGRSLLELGGNNAIIAFEDADL----SLVVPSALFAAVGTAGQRCTTARRLFIHESIH 316
Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 405
V+++ K + G P G L + V +A +G ++ G
Sbjct: 317 DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGG--KV 374
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465
+ Y PT++ + H + E F PI+ + KF +EEV N+ + GL ++
Sbjct: 375 MDRPG--NYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSI 432
Query: 466 FSGSQHRARE--IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523
F+ R CG+ +N S FGG K +G GR +G + +
Sbjct: 433 FTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIG-GAFGGEKHTGGGRESGSDAWKQYMR 491
Query: 524 VKSV 527
+
Sbjct: 492 RSTC 495
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 309 bits (795), Expect = 8e-99
Identities = 75/524 (14%), Positives = 161/524 (30%), Gaps = 63/524 (12%)
Query: 49 SFI---YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKS 105
+ + +I G + +P T L +
Sbjct: 10 NHVAGQWIAGTGAG------ITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRAL 63
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK- 164
++ QR L ++K + + I++ ++G T D+ +I +++ G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASL 122
Query: 165 -----WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSG 216
S + V GV I ++N+P + P L + G
Sbjct: 123 GEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLS---G 179
Query: 217 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIF 274
+++K + +W R++ + A P + +I G + L S D + F
Sbjct: 180 VPVIVKPATATAWLT---QRMVADVVDAGILPPGALSIICGSS--AGLLDQIRSFDVVSF 234
Query: 275 VGSPGVGRMIMRNASKT--LTPVTLELGGKDAFIVCDDVDVPHV-----AQIAVRAALQS 327
GS + + + + ++ ++ I+C D + VR
Sbjct: 235 TGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVK 294
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
SGQ C R +V + + + ++ G P MG+L E E + +
Sbjct: 295 SGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGI 354
Query: 388 NDALDKGAEILARGSF----GHLSEGAVDQYFPPTV--IVNVNHTMKLMQEEAFGPIMPI 441
++ + + A P + + + ++ L E FGP+ +
Sbjct: 355 AALREEAVLAYDSSAVPLIDADANIAA---CVAPHLFVVNDPDNATLLHDVEVFGPVASV 411
Query: 442 MKFNT--------DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 493
+ + V LA + L +++S +A ++ ++ + +
Sbjct: 412 APYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPS 471
Query: 494 YMCQS---------LPFGGVKDSGFGR-FAGVEGLRACCLVKSV 527
GG +G G G+ L ++
Sbjct: 472 VQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAI 515
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 305 bits (784), Expect = 1e-97
Identities = 130/461 (28%), Positives = 212/461 (45%), Gaps = 33/461 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P+T K +G PA +A+ + + A+ AQK WAK + + R+ LR I E++ ++
Sbjct: 35 PSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAP 94
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVE 185
+ + GK + A E+ T I + G+ + P + IHK
Sbjct: 95 MLVAEQGKLLSVA-EMEVDVTATFIDYGCDNALTIEGD--ILPSDNQDEKIYIHKV---- 147
Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P GVV I +WN+P P L GN +V+K ++ + +
Sbjct: 148 --PRGVVVGITAWNFPLALAGRKIGPALIT---GNTMVLKPTQETPLAT-----TELGRI 197
Query: 243 AA-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
A G P+ +++VI G G+ L S I GS G+ I + +++ +TPV LE
Sbjct: 198 AKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLE 257
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK +V DD D+ A+ A+ + GQ C ER YVH +Y F+++ +VK
Sbjct: 258 LGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKG 317
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
+ G P+ MG C + + ++V++A+ +GA + G + ++ PT
Sbjct: 318 LKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPT 377
Query: 419 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 478
V+V+V ++ EE FGPI+PI+K ++ E+ ++ NDS YGL V + S + +
Sbjct: 378 VLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAIS 437
Query: 479 QIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
++ G IN + G K SGFG G GL
Sbjct: 438 DLEVGEVYINRGMGEQHQG---FHNGWKQSGFGGEDGKFGL 475
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 300 bits (770), Expect = 3e-95
Identities = 119/489 (24%), Positives = 196/489 (40%), Gaps = 32/489 (6%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G ++ ++ P+ + +G +AE + + A KA K W + R + L
Sbjct: 44 GEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLL 103
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL---SEGEKWLKPEYRS 172
+ + + + GK V+A ++ E I ++ ++ P
Sbjct: 104 KAAALMRRRKRELEATLVYEVGKNWVEA-SADV---AEAIDFIEYYARAALRYRYPAVEV 159
Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML-AAVFSGNGIVIKVSENASWSG 231
+ + PLG I WN+P IF M+ V GN ++ K +E+A G
Sbjct: 160 VPYPGED--NESFYVPLGAGVVIAPWNFPV-AIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNA 288
F I A G P +V+ + G E G LV + I F GS VG I A
Sbjct: 217 AKVFEIFHEA----GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272
Query: 289 SKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+ +E GGK+A IV + D A+ V +A GQ C+ A R + +
Sbjct: 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ 332
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
Y + +V K + +S GP D+G + E K+ + + ++G +L
Sbjct: 333 GAYEPVLERVLKRAERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKR 391
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
EG + PTV V ++ QEE FGP++ +++ E +++AND+ YGL
Sbjct: 392 LE--GEGY---FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLT 446
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRAC 521
V+S + + G N + + PFGG K SG G ++ LR
Sbjct: 447 GGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLF 506
Query: 522 CLVKSVVED 530
+K+V E
Sbjct: 507 LEMKAVAER 515
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 294 bits (754), Expect = 2e-93
Identities = 137/460 (29%), Positives = 214/460 (46%), Gaps = 35/460 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA LG P + E + A +A W + K+R LR ++EHQ+ +
Sbjct: 32 PANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLAR 91
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
+ + + GK + +A GEI I W EG+ R G K+ V
Sbjct: 92 LMTLEQGKPLAEA-KGEISYAASFIEWFAEEGK-------RIYGDTIPGHQADKRLIVIK 143
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV AI WN+P I P LAA G +V+K + +S + A LA
Sbjct: 144 QPIGVTAAITPWNFPAAMITRKAGPALAA---GCTMVLKPASQTPFSA-----LALAELA 195
Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
G P + +V+TG A G L S+ V K+ F GS +GR +M +K + V+LEL
Sbjct: 196 IRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ + A+ + +++GQ C A R YV +Y F ++ + + +
Sbjct: 256 GGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKL 315
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G L +G L + K++ + DAL+KGA ++ G +F PT+
Sbjct: 316 HIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGG----NFFQPTI 371
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+V+V K+ +EE FGP+ P+ +F + +V+ AND+ +GL ++ R +
Sbjct: 372 LVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEA 431
Query: 480 IQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
++ G+ IN SN + PFGG+K SG GR G+
Sbjct: 432 LEYGIVGINTGIISNEVA---PFGGIKASGLGREGSKYGI 468
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 294 bits (756), Expect = 3e-93
Identities = 132/460 (28%), Positives = 210/460 (45%), Gaps = 34/460 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + P++ +V V + A ++ + RR++L + + E++E I
Sbjct: 34 PATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGR 93
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
I + GK +A GE+ + V +
Sbjct: 94 ILCMEHGKPWKEA-QGEVDYAAGFFDYCAKHIS-------ALDSHTIPEKPKDCTWTVHY 145
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV G IV WN+P I + LAA G VIK + + I ++
Sbjct: 146 RPVGVTGLIVPWNFPIGMIAKKLSAALAA---GCPSVIKPASETPLTM-----IAFFSVM 197
Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
+ P+ +V+++ G A G+ L V + F GS VGR ++ + ++ + + LEL
Sbjct: 198 DKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALEL 257
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ A + + GQ C A R +VH + F ++A+ V +
Sbjct: 258 GGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKM 317
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
+ G + D+G L + +K++ + DALDKGA ++A L +G +FPPTV
Sbjct: 318 TVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG---LFFPPTV 374
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ V+ M QEE FGP++P+ F T+EEV+ ND+ +GL VF+ RA+ +AA
Sbjct: 375 VQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAG 434
Query: 480 IQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
++ G N PFGG+K SG GR G+EGL
Sbjct: 435 LRFGHVGWNTGTGPTPEA---PFGGMKASGIGREGGLEGL 471
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 292 bits (751), Expect = 9e-93
Identities = 146/460 (31%), Positives = 225/460 (48%), Gaps = 35/460 (7%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + LG P + AE + A+ A W + K+R LR +I + + +
Sbjct: 35 PATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLAL 94
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
I + + GK + +A GEI I W EG+ R +G +K+ V
Sbjct: 95 ILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGK-------RVAGDTLPTPDANKRIVVVK 146
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV AI WN+P I P LAA G IV+K +E+ +S + A LA
Sbjct: 147 EPIGVCAAITPWNFPAAMIARKVGPALAA---GCPIVVKPAESTPFSA-----LAMAFLA 198
Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
G P+ ++ V+ G G + S+ V K+ F GS VGR++M ++ T+ +TLEL
Sbjct: 199 ERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLEL 258
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ + A+ + +++GQ C RF+VH +Y F ++A V +
Sbjct: 259 GGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKL 318
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G +G L +K+++ + DAL KGA ++ G L +F PTV
Sbjct: 319 KVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGH----GFFEPTV 374
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ V M + +EE FGP+ P+ +F ++EE+V+LAND+ +GL ++S R +A
Sbjct: 375 LTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEA 434
Query: 480 IQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
++ G+ IN SN + PFGGVK SG GR G+
Sbjct: 435 LEYGMVGINTGLISNEVA---PFGGVKQSGLGREGSHYGI 471
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 289 bits (743), Expect = 2e-91
Identities = 138/460 (30%), Positives = 220/460 (47%), Gaps = 37/460 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA +G P+LS A + E + + KA WA + K+R LR II + + I
Sbjct: 55 PADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIAL 114
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
I + + GK + +A GE++ I W E + R G ++ V
Sbjct: 115 IMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAK-------RVYGDTIPAPQNGQRLTVIR 166
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV AI WN+P I P LAA G ++++ ++ + + LA
Sbjct: 167 QPVGVTAAITPWNFPAAMITRKAAPALAA---GCTMIVRPADLTPLTA-----LALGVLA 218
Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
G P ++ ++TG A E G L S+ V K+ F GS VGR++M + T+ ++LEL
Sbjct: 219 EKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLEL 278
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ A+ + +++GQ C A R YV R +Y F ++A VK +
Sbjct: 279 GGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKEL 338
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G +G + + K++ + DA+ KGA+++ G G +F P +
Sbjct: 339 KVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK----ELGG--LFFEPGI 392
Query: 420 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 479
+ V M + +EE FGP+ P+ F+T+EEV+ AND+ +GL ++ + RA ++
Sbjct: 393 LTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEA 452
Query: 480 IQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
++ G+ N SN + PFGGVK SG GR G+
Sbjct: 453 LEYGMVGHNTGLISNEVA---PFGGVKQSGLGREGSKYGI 489
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 2e-91
Identities = 137/464 (29%), Positives = 220/464 (47%), Gaps = 39/464 (8%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PA+ LG E V A +A W + S K+R LR +I++++ +
Sbjct: 33 PASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLAR 92
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
I + ++GK + +A GEI+ + + W E R G ++A V
Sbjct: 93 IITAESGKPLKEA-HGEILYSAFFLEWFSEEAR-------RVYGDIIHTPAKDRRALVLK 144
Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
P+GV I WN+P I LAA G +V+K +E+ +S + A LA
Sbjct: 145 QPIGVAAVITPWNFPSAMITRKVGAALAA---GCTVVVKPAEDTPFSA-----LALAELA 196
Query: 244 A-VGAPENLVDVITGF----AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 296
+ G P + +VI E GEA+ + V KI F GS G++++ +A+ ++ V+
Sbjct: 197 SQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVS 256
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ-VAKI 355
+ELGG FIV D +V A+ + +++GQ C + +F V R I+ FV +
Sbjct: 257 MELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAM 316
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
K++ G G L + EK++ VNDA+ KGA ++ G L + +F
Sbjct: 317 KKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGK----NFF 372
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 475
PT++ NV M EE FGP+ P++KF+T+EE + +AN + GL +S +
Sbjct: 373 EPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWR 432
Query: 476 IAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 518
+A Q++ G+ +N+ S+ C PFGGVK SG GR G+
Sbjct: 433 VAEQLEVGMVGVNEGLISSVEC---PFGGVKQSGLGREGSKYGI 473
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 285 bits (733), Expect = 2e-90
Identities = 122/450 (27%), Positives = 201/450 (44%), Gaps = 17/450 (3%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
+++ E V +AR A + R Q L L + I E ++ + + D K +A
Sbjct: 18 SKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYY 77
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
E++ E+I +++ + +W E + + PLGVV I +WNYPF+
Sbjct: 78 EEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 265
PM+ A+ +GN +V+K SE + II L ++L VI G L
Sbjct: 138 IQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL-----DKDLYPVINGGVPETTEL 192
Query: 266 VSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 324
+ D I++ GS GVG++IM A+K LTPVTLELGGK V + D+ +
Sbjct: 193 LKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252
Query: 325 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384
+SGQ C + I V ++ K +K + D G + H +++
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSR-DYGRIISARHFQRVM 311
Query: 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444
L+ +G ++ G+ A +Y PT++ +V+ +MQEE FGP++PI+
Sbjct: 312 GLI-----EGQKVAYGGTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCV 361
Query: 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGV 504
+ EE ++ N L +FS + +++ A+ G A ND + SLPFGGV
Sbjct: 362 RSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGV 421
Query: 505 KDSGFGRFAGVEGLRACCLVKSVVEDRWWP 534
+SG G + G + +S +
Sbjct: 422 GNSGMGSYHGKKSFETFSHRRSCLVRPLMN 451
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 3e-87
Identities = 121/448 (27%), Positives = 186/448 (41%), Gaps = 20/448 (4%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
S A++D + + A + R+Q L L + +I ++E + + D GK
Sbjct: 26 SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85
Query: 144 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203
L EI +I + L+ ++W+ P S + + V P GV I +NYP +
Sbjct: 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVN 145
Query: 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE 263
P++ A+ GN +IK SE + +II A V VI G +
Sbjct: 146 LTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF-----APEYVAVIQGGRDENS 200
Query: 264 ALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322
L+S D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+ +
Sbjct: 201 HLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMF 260
Query: 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382
+SGQ + YVH + + ++ + VK+ G L ++
Sbjct: 261 GKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN-----STGKLVTERQVQR 315
Query: 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442
L +L+ ++L + TV+ V LM EE FGPI+P++
Sbjct: 316 LVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVL 367
Query: 443 KFNTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 501
+F++ + N L VF A+ I QIQ G A +N + LPF
Sbjct: 368 EFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPF 427
Query: 502 GGVKDSGFGRFAGVEGLRACCLVKSVVE 529
GG+ SG G + G KSV
Sbjct: 428 GGIGASGMGEYHGHFSYLTFTHKKSVRI 455
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 268 bits (687), Expect = 5e-79
Identities = 107/472 (22%), Positives = 190/472 (40%), Gaps = 31/472 (6%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G+ ++ + P + LG EV + +A A+ A W + + R ++L
Sbjct: 538 GKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLL 597
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL---SEGEKWLKPEYRS 172
+ + + + GK A ++ E I +L E + +P+
Sbjct: 598 KAAQAARKRLFELSAWQVLEIGKQWDQA-YADV---TEAIDFLEYYAREMIRLGQPQRVG 653
Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN-PMLAAVFSGNGIVIKVSENASWSG 231
+ + P GV I WN+P I AA+ +GN +V K S S G
Sbjct: 654 HAPG---ELNHYFYEPKGVAAVIAPWNFPL-AISMGMASAAIVTGNCVVFKPSGITSIIG 709
Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
+ + A G PE + + G + G+ LV + I F GS G I+ A
Sbjct: 710 WHLVELFREA----GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765
Query: 289 SKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+K + + E+GGK+A I+ DD D+ + +A GQ C+ R V
Sbjct: 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLD 825
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
+Y F+ ++ + K+ GP MGA+ + + ++ +G +
Sbjct: 826 AVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPV 885
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 462
EG + P T+I + ++ QEE FGP++ +M+ ++ ++ AN +++ L
Sbjct: 886 --PAGEG---YFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALT 940
Query: 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
+FS S + + + G IN + + + PFGG + SG G AG
Sbjct: 941 GGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 2e-75
Identities = 77/492 (15%), Positives = 159/492 (32%), Gaps = 55/492 (11%)
Query: 60 PQSETKVQCYEPATMKYLGY-FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
PQ++ T + L FP + EV++ A K + + + + +R LR +
Sbjct: 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIA 62
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKP 168
+ + I + +T V + GEI T ++ + + P
Sbjct: 63 SELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPN-P 120
Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI-----FNPMLAAVFSGNGIVIKV 223
+ I + LG V + N+P LAA G +++K
Sbjct: 121 TRAPLPKPDIR----RQQIALGPVAVFGASNFPLAFSAAGGDTASALAA---GCPVIVKG 173
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGV 280
+ I+ AL P+ + ++ G G+ALVS + + F GS G
Sbjct: 174 HTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGG 233
Query: 281 GRMIMRNASKTLTPVT--LELGGKDAFIVCDDVDV--PHVAQIAVRAALQSSGQNCAGAE 336
GR + A + P+ ELG + + +A V + GQ C
Sbjct: 234 GRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPG 293
Query: 337 RFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395
+ F+ +++ S + + ++ + D G
Sbjct: 294 VVFALNTPETQAFIETAQSLIRQQSPST------LLTPGIRDSYQSQVVSR---GSDDGI 344
Query: 396 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 455
++ + A+ + + + +EE FGP I+ +++ L+
Sbjct: 345 DVTFSQAESPCVASAL--FVTSSENWRKHP---AWEEEIFGPQSLIVVCENVADMLSLSE 399
Query: 456 DSRYGLGCAVFSGSQ--HRAREIAAQIQ--CGVAAINDFASNYM-CQSLPFGGVKDS--- 507
L + + + + ++ +++ G N + + ++ GG +
Sbjct: 400 MLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTH 459
Query: 508 GFGRFAGVEGLR 519
G E +
Sbjct: 460 SASTSVGAEAIH 471
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 246 bits (629), Expect = 4e-71
Identities = 105/454 (23%), Positives = 173/454 (38%), Gaps = 29/454 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
A L + + VA AR W+++ R L +
Sbjct: 535 KAETGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIA 594
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ R+ GKT+ DA L E+ E + ++G K E G + +
Sbjct: 595 LLQREGGKTLDDA-LSEL---REAADFCRYYAAQGRKLFGSETAMPGPTGESNA--LTMR 648
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
GV AI WN+P + AA+ +GN +V K +E ++ A G
Sbjct: 649 GRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA----GI 704
Query: 248 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGK 302
P++ + ++TG G AL + + ++F GS V R I R + + P+ E GG
Sbjct: 705 PKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGI 764
Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
+A I VA V +A +S+GQ C+ +V D+ + VA + + G
Sbjct: 765 NAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 422
P +G + +E ++L + + A G EG + P +
Sbjct: 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFA----GPAPEG---CFVAPHIFEL 877
Query: 423 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
+ EE FGPI+ ++++ + E V++ + YGL V S I ++
Sbjct: 878 TEAGQ--LTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRV 935
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 514
Q G +N + PFGG SG G AG
Sbjct: 936 QVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAG 969
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 230 bits (589), Expect = 2e-69
Identities = 74/439 (16%), Positives = 145/439 (33%), Gaps = 36/439 (8%)
Query: 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 142
S EV + A KAQK A S +Q ++ + +E + +++ +TG +
Sbjct: 9 RSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68
Query: 143 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 202
+ + + + + + + + + + + M PLGVV ++ P
Sbjct: 69 DKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAV------PLGVVAGLIPSTNPT 122
Query: 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 261
+ L ++ +GN IV NA + RII A G P+ + +T +
Sbjct: 123 STVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQG 182
Query: 262 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
+ L+ I+ G + + + TP G + ++P +
Sbjct: 183 TDQLMKHKDTAVILATGGSAMVKAAYSSG----TPAIGVGPGNGPAFIERSANIPRAVKH 238
Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379
+ + +G CA + V R +A+ K + A +G L +
Sbjct: 239 ILDSKTFDNGTICASEQSVVVERVNKEAV---IAEFRKQGAHFLSDAEAVQLGKFILRPN 295
Query: 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439
+V ++ A + + A T V + +E+ PI+
Sbjct: 296 GSMNPAIVGKSVQHIANLAGLT----VPADARVLIAEET---KVGAKIPYSREK-LAPIL 347
Query: 440 PIMKFNTDEEVVKLANDSRY----GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 495
T +E +L+ D Y G + S + RE A + +N
Sbjct: 348 AFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVN------- 400
Query: 496 CQSLPFGGVKDSGFGRFAG 514
GG+ + A
Sbjct: 401 -TPGALGGIGATTNLVPAL 418
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 230 bits (588), Expect = 2e-68
Identities = 87/468 (18%), Positives = 146/468 (31%), Gaps = 56/468 (11%)
Query: 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 139
F + V+ A +A + SS K+R FLR + I E I EI S++TG
Sbjct: 57 FAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLP 116
Query: 140 MVDASLGEIMTTCEKITWLLSEGEK--WLK-------PEYRSSGRSMIHKKAKVEFHPLG 190
+ GE T ++ EK +L PE + + R I ++ P+G
Sbjct: 117 EARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEI----RLVQRPVG 171
Query: 191 VVGAIVSWNYPFHNI-----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
V + N+P LAA G +V+K +G + AA+
Sbjct: 172 PVAVFGASNFPLAFSTAGGDTAAALAA---GCPVVVKGHSAHPGTGEIVAEAVDAAIRKT 228
Query: 246 GAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV--TLELG 300
G + +I G + + G ALV + + F GS GR + + P+ ELG
Sbjct: 229 GVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELG 288
Query: 301 GKDAFIVCDDVDVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIV 356
+ + + + + +GQ C V F + + +
Sbjct: 289 SVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEAL 348
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
V+ L A + L S G
Sbjct: 349 AKVAPQTMLTDGIAKA---------YRDGQARFATRNAVKPLLATE----SSGRDASPNL 395
Query: 417 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS----QHR 472
+ EE FGP+ +++ + E+ +LA + L + + R
Sbjct: 396 FETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETAR 455
Query: 473 AREIAAQIQCGVAAINDF-----ASNYMCQSLPFGGVKDSGFGRFAGV 515
+ + G +N F + M G S V
Sbjct: 456 RLRPVLERKAGRVLVNGFPTGVEVVDSMV---HGGPYPASTNFGATSV 500
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 221 bits (565), Expect = 5e-66
Identities = 70/442 (15%), Positives = 154/442 (34%), Gaps = 51/442 (11%)
Query: 81 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140
P + AE+D +A+ +KAQ+ +A S +Q + R + + + + + ++G +
Sbjct: 2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGI 61
Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200
V+ + + E I ++ A+ P+G++ IV
Sbjct: 62 VEDKVIKNHFASEFI--YNKYKDEQTCGILEEDDNLGTMTIAE----PVGIICGIVPTTN 115
Query: 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA- 259
P L ++ + NGI+ A S +++ A A GAP++++ I +
Sbjct: 116 PTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSV 175
Query: 260 ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 317
E AL+ + I+ G PG+ + + P G ++ + D+
Sbjct: 176 ELSNALMKHDDIALILATGGPGMVKAAY----SSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 318 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 377
+ + +G CA + V ++Y + A + +
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFAS-----------HKAH----VLSK 276
Query: 378 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGA---VDQ---YFPPTVIVNVNHTMKLMQ 431
++K++ ++ A+I+ + ++E A V + V++
Sbjct: 277 TDADKVRKVLLIDGALNAKIVGQ-PATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH 335
Query: 432 EEAFGPIMPIMKFNTDEEVVKLA----NDSRYGLGCAVFSGSQ---HRAREIAAQIQCGV 484
E+ P + + + + E+ V A G +++ R R +++
Sbjct: 336 EK-LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTAR 394
Query: 485 AAINDFASNYMCQSLPFGGVKD 506
IN GG+ D
Sbjct: 395 ILIN--------IPTTHGGIGD 408
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 198 bits (507), Expect = 3e-57
Identities = 115/501 (22%), Positives = 212/501 (42%), Gaps = 49/501 (9%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
YI +++ PAT + L P ++ ++D A +A K W+K + +R
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRR- 67
Query: 112 QFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
RIL + + +H+E + + + + GK +A LGE+ E + + +
Sbjct: 68 --ARILFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPS-LMMG 123
Query: 169 EYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVS 224
+ +S + +A +P+GVVG I +N+P + PM A+ GN ++K S
Sbjct: 124 DSLASIATDV---EAANYRYPIGVVGGIAPFNFPMM-VPCWMFPM--AIALGNTFILKPS 177
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282
E + + A G P+ + +V+ G + ++ + I FVGS VG
Sbjct: 178 ERTPLLTEKLVELFEKA----GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGE 233
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
+ + S+ L V G K+ IV +D ++ V AA S+G+ C V
Sbjct: 234 YVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEE 293
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
I F++++ + V + G L +G + ++ ++ + + L++GA ++ G
Sbjct: 294 GIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR 353
Query: 403 FGHLSEGAVDQYFP-PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461
+ D YF PT+ NV M + ++E F P++ +++ +E +++AN S +
Sbjct: 354 ----ENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFAN 409
Query: 462 GCAVFSGSQHRAREIAAQIQCGVAAIN--------DFASNYMCQSLPFGGVKDSGFG--R 511
G +F+ + + R I G+ IN F PF G K S FG
Sbjct: 410 GACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFF---------PFSGWKSSFFGTLH 460
Query: 512 FAGVEGLRACCLVKSVVEDRW 532
G + + K V R+
Sbjct: 461 ANGKDSVDFYTRKKVVTA-RY 480
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 9e-56
Identities = 113/507 (22%), Positives = 218/507 (42%), Gaps = 57/507 (11%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
+I + S + PAT + G S A++ V A+ AQ WA ++ ++R
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRR- 88
Query: 112 QFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
R+ +K+ + ++ + E+ SR+ GKT+ DA G+I+ E +++ K
Sbjct: 89 --ARVFMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPH-LQKS 144
Query: 169 EYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYP-------FHNIFNPMLAAVFSGNGIV 220
E+ G + P+G+ I +N+P F A+ GN +
Sbjct: 145 EFTEGAGPGI---DMYSIRQPVGIGAGITPFNFPGMIPMWMF-----AP--AIACGNAFI 194
Query: 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSP 278
+K SE ++ A G P +++V+ G +A+++ + + FVGS
Sbjct: 195 LKPSERDPSVPIRLAELMIEA----GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGST 250
Query: 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC-AGAER 337
+ R + A+ G K+ I+ D D+ A + A S+G+ C A +
Sbjct: 251 PIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVA 310
Query: 338 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 397
V + + ++ +V+S+ GP K DMG + E +++++L++ +++GA++
Sbjct: 311 VPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKL 370
Query: 398 LARGSFGHLSEGAVDQYFP-PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 456
+ G +G + +F + +V M + + E FGP++ +++ EE + L
Sbjct: 371 VVDGR-DFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMK 429
Query: 457 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLP---------FGGVKDS 507
YG G A+++ AR+ A++I G+ +N +P FGG K S
Sbjct: 430 HEYGNGVAIYTRDGDAARDFASRINIGMVGVN----------VPIPVPLAYHSFGGWKSS 479
Query: 508 GFG--RFAGVEGLRACCLVKSVVEDRW 532
FG G + ++ K++ RW
Sbjct: 480 SFGDLNQHGTDSIKFWTRTKTITS-RW 505
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 2e-49
Identities = 102/484 (21%), Positives = 183/484 (37%), Gaps = 46/484 (9%)
Query: 57 GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
+ P + F +A ++ + A A+K W R +
Sbjct: 70 DEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADR---AQ 126
Query: 116 ILLK----YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL---LSEGEKWLKP 168
+ LK + + + GKT++ A + E I + +
Sbjct: 127 VFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAA---AELIDFFRFNAKFAVELEGE 183
Query: 169 EYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSEN 226
+ S S + L G V AI +N F I N A GN ++ K S+
Sbjct: 184 QPISVPPS----TNHTVYRGLEGFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDT 237
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
A + +RI++ A G P N++ + T G+ + SS + I F GS +
Sbjct: 238 AMLASYAVYRILREA----GLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKH 293
Query: 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 337
+ R + +T + E GGK+ V DV V +R+A + GQ C+ R
Sbjct: 294 LWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSR 353
Query: 338 FYVHRDIYALFVSQVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAE 396
YV + ++ ++ + + G P A+ + +++ + A +
Sbjct: 354 LYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL 413
Query: 397 ILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKL 453
+ G + S G Y+ P +I + + +M+EE FGP++ + + D E +KL
Sbjct: 414 SILAGGQCNESVG----YYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKL 469
Query: 454 AND-SRYGLGCAVFSGSQHRAREIAAQIQCGV--AAINDFASNYMCQSLPFGGVKDSGFG 510
+ + YGL AVF+ + +E ++ IND ++ + PFGG + SG
Sbjct: 470 VDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTN 529
Query: 511 RFAG 514
G
Sbjct: 530 DKPG 533
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 7e-06
Identities = 61/496 (12%), Positives = 132/496 (26%), Gaps = 145/496 (29%)
Query: 23 LIPPNVPSI--DVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYF 80
++ + + D DV D K
Sbjct: 21 ILSVFEDAFVDNFDCKDVQD----------------------MPK--------------- 43
Query: 81 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140
LS+ E+D + R F +L K + M
Sbjct: 44 SILSKEEIDHIIMSKDAVSGT--------LRLFWTLLSK-----------------QEEM 78
Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN- 199
V + E++ +L+S +K E R SM+ + + L +N
Sbjct: 79 VQKFVEEVLRI--NYKFLMSP----IKTEQR--QPSMMTRMYIEQRDRL--------YND 122
Query: 200 ---YPFHNIFNP--------MLAAVFSGNGIVI-------K------VSENASWSGCFYF 235
+ +N+ L + ++I K V + F
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMR--NASKTLT 293
+I L +PE +++++ + L+ +D S + +R + L
Sbjct: 183 KIFWLNLKNCNSPETVLEML-------QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235
Query: 294 PVTLELGGKDAFIVCDDV-DVPHVA------QIAV--R-AALQSSGQNCAGAERFYVH-- 341
+ ++ +V +V + +I + R + H
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 342 --------RDIYALFVSQ-VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392
+ + ++ + + V P + A + + N + D
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR--LSIIAESIRDGLATWDNWKHVNCD 353
Query: 393 KGAEILARGSFGHLSEGAVDQYFPPTVI--VNVNHTMKLMQ----EEAFGPIMPIM-KFN 445
K I+ S L + F + + + L+ + +M ++ K +
Sbjct: 354 KLTTIIES-SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 446 TDEEVVKLANDSRYGL 461
V K +S +
Sbjct: 413 KYSLVEKQPKESTISI 428
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} Length = 463 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 57/290 (19%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD-------TGK 138
V+++ AR ++ A +QR + + L + + ++ I + +D
Sbjct: 29 PTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88
Query: 139 TMVD------ASLGEIMTTCEKITWLLSE--GEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
++ + L + +I + G L+ + + ++ V P+G
Sbjct: 89 PLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKN--LELEQVTV---PIG 142
Query: 191 VVGAI------VSWNYPFHNIFNPMLAAVF---SGNGIVIKVSENASWSGCFYFRIIQAA 241
V+ I A SGNG+++K + A+ S + Q A
Sbjct: 143 VLLVIFESRPDCLPQ-----------VAALAIASGNGLLLKGGKEAAHSNRILHLLTQEA 191
Query: 242 LAAVGAPENLVDVITGFAETGE--ALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
L+ G E V ++ E + L +D II GS + R I + A PV
Sbjct: 192 LSIHGVKE-AVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAA--KGIPVMGHS 248
Query: 300 GGKDAFIVC-----DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
G +C + V V ++ + + C E +HRD+
Sbjct: 249 EG-----ICHMYVDSEASVDKVTRLVRDSKCEYPAA-CNALETLLIHRDL 292
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 93.45 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 86.52 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-110 Score=917.46 Aligned_cols=476 Identities=28% Similarity=0.451 Sum_probs=444.5
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++|+
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34568999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..|+...|+..+++.++|+++.+++.... ..+. ..+...+++++|+|||++|+|||||+.++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 159 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE-QIPL---RETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEE-EEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCc-cccc---cCCcceeEEecceeEEEEeccccCcchhh
Confidence 9999999999999999996667999999999999988765432 2221 13456789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+||||.+|+++.++++++. ++|+|+|++|+|+|++ ++++.|++ +||+|+||||+.+|+
T Consensus 160 ~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~----eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~ 235 (490)
T 2wme_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYT----EAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHH----HhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHH
Confidence 9999999999999999999999999999888765 5799999999999976 78999998 899999999999998
Q ss_pred HHHH-HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMR-NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~-~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++ .+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 236 ~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v 315 (490)
T 2wme_A 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRL 315 (490)
T ss_dssp HHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcC
Confidence 8876 567789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++||||++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+||||++|
T Consensus 316 Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 395 (490)
T 2wme_A 316 GDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSI 395 (490)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEE
Confidence 99999999999999999999999999999999999999998765444457999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|+||+||+||++||++|
T Consensus 396 ~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PFGG~k~SG~Gre~G~~gl~~f 473 (490)
T 2wme_A 396 LVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHY 473 (490)
T ss_dssp EEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSHHHHHHTT
T ss_pred EEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCC--CCCCCcccccccccCchhHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999987554 34599999999999999999999999
Q ss_pred ceeeEEEEcc
Q 007627 522 CLVKSVVEDR 531 (595)
Q Consensus 522 t~~k~v~~~~ 531 (595)
|+.|+|+++.
T Consensus 474 t~~K~v~i~~ 483 (490)
T 2wme_A 474 TRIKSVQVEL 483 (490)
T ss_dssp EEEEEEEEEC
T ss_pred hceeEEEEEC
Confidence 9999998865
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-105 Score=879.87 Aligned_cols=475 Identities=31% Similarity=0.498 Sum_probs=443.0
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH-----HHhhcCHHHHHHHHHHHHHHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-----VWAKSSFKQRRQFLRILLKYII 122 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~l~~~l~ 122 (595)
..++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||. .|++++..+|.++|++++++|+
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~ 86 (503)
T 3iwj_A 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVT 86 (503)
T ss_dssp CCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHH
T ss_pred CCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 35789999999988889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhh
Q 007627 123 EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 202 (595)
Q Consensus 123 ~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~ 202 (595)
+|+++|++++++|+||+..++. .|+..+++.++|++++++++..+...+......+...++.++|+|||++|+|||||+
T Consensus 87 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T 3iwj_A 87 EKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM 165 (503)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence 9999999999999999999984 699999999999999988775543222111123456889999999999999999999
Q ss_pred HhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChh
Q 007627 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG 279 (595)
Q Consensus 203 ~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~ 279 (595)
.+.++++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.
T Consensus 166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~ 241 (503)
T 3iwj_A 166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICK----EVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHH----HhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHH
Confidence 9999999999999999999999999999998887765 6899999999999976 78999997 899999999999
Q ss_pred HHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhc
Q 007627 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (595)
Q Consensus 280 ~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l 359 (595)
+|+.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 242 ~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 321 (503)
T 3iwj_A 242 TGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNI 321 (503)
T ss_dssp HHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCce
Q 007627 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (595)
Q Consensus 360 ~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl 439 (595)
++|+|.++++++|||++++++++++++|++|+++|+++++||.... ....|+|++|||+.+++++|++++||+||||+
T Consensus 322 ~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 399 (503)
T 3iwj_A 322 KISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVL 399 (503)
T ss_dssp CBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred cCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceE
Confidence 9999999999999999999999999999999999999999997432 12479999999999999999999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
+|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|.||+|+++|.+||+
T Consensus 400 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~g~~ 477 (503)
T 3iwj_A 400 CVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPC--FTQAPWGGVKRSGFGRELGEWGLD 477 (503)
T ss_dssp EEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCC--CTTSCBCCSGGGEECCBSHHHHHH
T ss_pred EEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcccCCCcchHHHHH
Confidence 999999999999999999999999999999999999999999999999986443 345999999999999999999999
Q ss_pred ccceeeEEEEcc
Q 007627 520 ACCLVKSVVEDR 531 (595)
Q Consensus 520 ~~t~~k~v~~~~ 531 (595)
+||+.|+|+.+.
T Consensus 478 ~f~~~k~v~~~~ 489 (503)
T 3iwj_A 478 NYLSVKQVTQYI 489 (503)
T ss_dssp TTEEEEEEEEEC
T ss_pred HhhCeEEEEEeC
Confidence 999999998754
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-105 Score=878.88 Aligned_cols=473 Identities=28% Similarity=0.466 Sum_probs=442.7
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~--~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
+++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| ..|++++..+|.++|++++++|++|++
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 112 (520)
T 3ed6_A 33 QRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHRE 112 (520)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 568999999998888999999999999999999999999999999999999 889999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++. +|+..+++.++|++..++++... ..+... .+...++.++|+|||++|+|||||+.+.+
T Consensus 113 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 113 ALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGE-MIDSPI--PDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEE-EECCSS--TTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCe-ecccCC--CCCcccccccCccEEEEECCCccHHHHHH
Confidence 999999999999999995 69999999999999998876532 222211 24567899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++.++++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~ 264 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELME----EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKH 264 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHH----HHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHH----HhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 999999999999999999999999998888765 5899999999999964 78999998 8999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 265 i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~ 344 (520)
T 3ed6_A 265 IMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGN 344 (520)
T ss_dssp HHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCC
T ss_pred HHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
|.++++++|||+++.++++++++|++++++||++++||.....+....|+|++|||+.+++++|++++||+||||++|++
T Consensus 345 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 424 (520)
T 3ed6_A 345 GFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEG 424 (520)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEE
Confidence 99999999999999999999999999999999999999853211124799999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.... ..+||||+|+||+||++|++||++||+
T Consensus 425 ~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~--~~~PfGG~k~SG~Gre~G~~gl~~~t~ 502 (520)
T 3ed6_A 425 FETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYF--AQAPWGGYKQSGIGRELGKEGLEEYLV 502 (520)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCC--TTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred eCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCC--CCCCcCCcCcCcCCccchHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999986652 459999999999999999999999999
Q ss_pred eeEEEEcc
Q 007627 524 VKSVVEDR 531 (595)
Q Consensus 524 ~k~v~~~~ 531 (595)
.|+|+.+.
T Consensus 503 ~k~v~~~~ 510 (520)
T 3ed6_A 503 SKHILTNT 510 (520)
T ss_dssp EEEEEEES
T ss_pred eEEEEEcC
Confidence 99998754
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-105 Score=878.05 Aligned_cols=472 Identities=28% Similarity=0.457 Sum_probs=443.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 34578999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEE-ecceEEEEEcCcchhhHhh
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~PlGVV~~I~p~N~P~~~~ 205 (595)
+|++++++|+||+..++. +|+..+++.++|++++++++.... .+.. .+...++.+ +|+|||++|+|||||+.++
T Consensus 90 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 164 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHT-IPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMI 164 (506)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEE-CSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccC---CCceeeEeecccceEEEEECCCchHHHHH
Confidence 999999999999999996 799999999999999999876542 2221 345678888 9999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+
T Consensus 165 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~ 240 (506)
T 3rh9_A 165 AKKLSAALAAGCPSVIKPASETPLTMIAFFSVMD----KLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGR 240 (506)
T ss_dssp HHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHT----TTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHH----HhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 6899999999999965 78999998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|+++|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 241 ~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 320 (506)
T 3rh9_A 241 KLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVG 320 (506)
T ss_dssp HHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++|||++++++++++++|++++++||++++||...+ ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 321 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 397 (506)
T 3rh9_A 321 DGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMA 397 (506)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred CCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEE
Confidence 9999999999999999999999999999999999999998421 1279999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. ..+||||+|+||+|+++|++||++||
T Consensus 398 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft 475 (506)
T 3rh9_A 398 LFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPT--PEAPFGGMKASGIGREGGLEGLFEFV 475 (506)
T ss_dssp EECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCC--TTSCBCCSGGGEESCBSHHHHHTTTE
T ss_pred EeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCC--CCCCccCcCcCcCCcCccHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999986543 35999999999999999999999999
Q ss_pred eeeEEEEccc
Q 007627 523 LVKSVVEDRW 532 (595)
Q Consensus 523 ~~k~v~~~~~ 532 (595)
+.|+|+.+..
T Consensus 476 ~~K~v~~~~~ 485 (506)
T 3rh9_A 476 EAQTVPRGFA 485 (506)
T ss_dssp EEEEEEEC--
T ss_pred ceEEEEEcCc
Confidence 9999987653
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-105 Score=876.56 Aligned_cols=476 Identities=27% Similarity=0.438 Sum_probs=442.6
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
....++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENK 89 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..++. .|+..+++.++|++++++++..+.. +.. ..+...++.++|+|||++|+|||||+.+.
T Consensus 90 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 90 HILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 9999999999999999995 7999999999999999988765422 211 23457889999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~ 241 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAK----EAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGK 241 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHH----HTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHH
Confidence 9999999999999999999999999998888754 6899999999999965 78999998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 242 ~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg 321 (497)
T 3k2w_A 242 QIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVG 321 (497)
T ss_dssp HHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++|||++++++++++++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|+
T Consensus 322 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~ 401 (497)
T 3k2w_A 322 DPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIV 401 (497)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEE
Confidence 99999999999999999999999999999999999999973111112368999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|++||++||
T Consensus 402 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft 479 (497)
T 3k2w_A 402 KVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ--HQGFHNGWKQSGFGGEDGKFGLEQYL 479 (497)
T ss_dssp EESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCEETSEESCBSHHHHHHTTE
T ss_pred EeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCC--CCCCcCCcCCCcCCccchHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999986653 45999999999999999999999999
Q ss_pred eeeEEEEcc
Q 007627 523 LVKSVVEDR 531 (595)
Q Consensus 523 ~~k~v~~~~ 531 (595)
+.|+|+.+.
T Consensus 480 ~~k~v~~~~ 488 (497)
T 3k2w_A 480 EKKTVYINE 488 (497)
T ss_dssp EEEEEEEEC
T ss_pred ceEEEEEEc
Confidence 999998754
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-105 Score=880.04 Aligned_cols=488 Identities=21% Similarity=0.327 Sum_probs=442.7
Q ss_pred cCCCCCCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHH
Q 007627 34 DASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQF 113 (595)
Q Consensus 34 ~~p~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~ 113 (595)
..-.++-|-.......++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++
T Consensus 12 ~~~~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~ 91 (521)
T 4e4g_A 12 DLGTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARV 91 (521)
T ss_dssp ------------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CcCchhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 33344677777777778999999999888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEE
Q 007627 114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193 (595)
Q Consensus 114 L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~ 193 (595)
|++++++|++|+++|++++++|+||+..++. +|+..+++.++|+++..+. +..+..+. ...+...++.++|+|||+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~-~~~~~~~~--~~~~~~~~~~~~P~GVV~ 167 (521)
T 4e4g_A 92 FMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHL-QKSEFTEG--AGPGIDMYSIRQPVGIGA 167 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHH-TCEEEEEE--EETTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH-hcCccccc--CCCCcceeEEEcCCcEEE
Confidence 9999999999999999999999999999984 7999999999999876543 33222111 012346789999999999
Q ss_pred EEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCE
Q 007627 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDK 271 (595)
Q Consensus 194 ~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~ 271 (595)
+|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ +||+
T Consensus 168 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~ 243 (521)
T 4e4g_A 168 GITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMI----EAGLPAGILNVVNGDKGAVDAILTHPDIAA 243 (521)
T ss_dssp EECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCCCcCeEEEEeCChHHHHHHHhCCCcCE
Confidence 9999999999999999999999999999999999999998888765 689999999999998888899998 8999
Q ss_pred EEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccc-hHHHHHH
Q 007627 272 IIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVS 350 (595)
Q Consensus 272 I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~-v~d~f~~ 350 (595)
|+||||+.+|+.|+++|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|++
T Consensus 244 I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~ 323 (521)
T 4e4g_A 244 VSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLID 323 (521)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCccc
Q 007627 351 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 430 (595)
Q Consensus 351 ~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~ 430 (595)
+|+++++++++|+|.++++++|||++++++++++++|++++++||++++||.+...+.+..|+|++|||+.+++++|+++
T Consensus 324 ~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~ 403 (521)
T 4e4g_A 324 KLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIY 403 (521)
T ss_dssp HHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHH
T ss_pred HHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhh
Confidence 99999999999999999999999999999999999999999999999999975432233579999999999999999999
Q ss_pred ccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC
Q 007627 431 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG 510 (595)
Q Consensus 431 ~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G 510 (595)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... ..+.+||||+|+||+|
T Consensus 404 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~k~SG~G 482 (521)
T 4e4g_A 404 KTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPV-PLAYHSFGGWKSSSFG 482 (521)
T ss_dssp HSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCC-CCTTSCBCCEETTEES
T ss_pred cCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCCcCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997543 3355999999999999
Q ss_pred --CCCcHHHHhccceeeEEEEc
Q 007627 511 --RFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 511 --~~~G~~gl~~~t~~k~v~~~ 530 (595)
+++|++||++||+.|+|+.+
T Consensus 483 ~~~~~G~~gl~~ft~~K~v~~~ 504 (521)
T 4e4g_A 483 DLNQHGTDSIKFWTRTKTITSR 504 (521)
T ss_dssp SCCBSHHHHHHHTEEEEEEEEC
T ss_pred CCccchHHHHHHhheEEEEEEe
Confidence 79999999999999999875
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-105 Score=872.81 Aligned_cols=468 Identities=30% Similarity=0.519 Sum_probs=438.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++++|++|+++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. +|+..+++.++|++..+++.... ..+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 92 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGD-TLPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIAR 167 (484)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCc-ccccc--CCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence 99999999999999984 79999999999999887764322 11111 1245678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|
T Consensus 168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i 243 (484)
T 3ifg_A 168 KVGPALAAGCPIVVKPAESTPFSALAMAFLAE----RAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL 243 (484)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999998888765 6899999999999965 78999998 89999999999999999
Q ss_pred HHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCC
Q 007627 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (595)
Q Consensus 285 ~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (595)
++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 244 ~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 323 (484)
T 3ifg_A 244 MAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG 323 (484)
T ss_dssp HHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 365 ~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
.++++++|||+++.++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 399 (484)
T 3ifg_A 324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH----ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRF 399 (484)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEe
Confidence 9999999999999999999999999999999999999842 237999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|+||+||++|++||++||+.
T Consensus 400 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~ 477 (484)
T 3ifg_A 400 ASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLIS--NEVAPFGGVKQSGLGREGSHYGIDDYVVI 477 (484)
T ss_dssp CCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC--CSSSCBCCEETTEECCBSTTTTTGGGEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcCcCCCCchHHHHHHhhce
Confidence 9999999999999999999999999999999999999999999986432 34699999999999999999999999999
Q ss_pred eEEEE
Q 007627 525 KSVVE 529 (595)
Q Consensus 525 k~v~~ 529 (595)
|+|+.
T Consensus 478 k~v~~ 482 (484)
T 3ifg_A 478 KYLCV 482 (484)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-105 Score=871.47 Aligned_cols=461 Identities=28% Similarity=0.443 Sum_probs=430.6
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 007627 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (595)
Q Consensus 51 ~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~ 130 (595)
+||+|+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999875 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHH
Q 007627 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (595)
Q Consensus 131 ~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~ 210 (595)
++++|+||+..++. +|+..+++.++|++++++++.... .+.+ +...++.++|+|||++|+|||||+.+.+++++
T Consensus 79 ~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 152 (486)
T 3pqa_A 79 ILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIA 152 (486)
T ss_dssp HHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHH
Confidence 99999999999985 799999999999999998875432 2221 45788999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHH
Q 007627 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (595)
Q Consensus 211 ~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~ 287 (595)
+||++||+||+|||+.+|+++.++++++.+++.++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.
T Consensus 153 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~ 232 (486)
T 3pqa_A 153 PAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKK 232 (486)
T ss_dssp HHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999976 56899997 89999999999999999999
Q ss_pred hhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCC
Q 007627 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (595)
Q Consensus 288 aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (595)
|+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 233 aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 310 (486)
T 3pqa_A 233 AG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDE 310 (486)
T ss_dssp CC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred cC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcC
Confidence 88 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCH
Q 007627 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (595)
Q Consensus 368 ~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 447 (595)
++++|||++++++++++++|++++++|+++++||. ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 311 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~-------~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~- 381 (486)
T 3pqa_A 311 KTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE- 381 (486)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-
Confidence 99999999999999999999999999999999997 25899999999 9999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 448 ~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
||||+++|+++|||++||||+|.++++++++++++|+|+||++..+... .+||||+|+||+||++|++||++||+.|+|
T Consensus 382 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~-~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v 460 (486)
T 3pqa_A 382 EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQD-NMPFGGVKKSGLGREGVKYAMEEMSNIKTI 460 (486)
T ss_dssp HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCT-TSCBCCSGGGEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCC-CCCCCCcCcCcCCCCCcHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999998664333 699999999999999999999999999999
Q ss_pred EEccc
Q 007627 528 VEDRW 532 (595)
Q Consensus 528 ~~~~~ 532 (595)
+.+..
T Consensus 461 ~~~~~ 465 (486)
T 3pqa_A 461 IISKA 465 (486)
T ss_dssp EEEC-
T ss_pred EEcCC
Confidence 88653
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-105 Score=878.65 Aligned_cols=470 Identities=29% Similarity=0.425 Sum_probs=439.6
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+++
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 93 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDA 93 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 36789999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchh---hcCcccccCCcccccccceEEEecceEEEEEcCcchhhHh
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~ 204 (595)
|++++++|+||+..++ |+..+++.++|+++.+++ ++..+..+.. .+. .+++++|+|||++|+|||||+.+
T Consensus 94 la~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 94 LSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999987 999999999999988776 3433333221 234 88999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHH
Q 007627 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 205 ~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
+++++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|+.+.+++|++ +||+|+||||+.+|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~----eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILI----EAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHH----HTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHH----HhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 99999999999999999999999999998888765 689999999999996688999998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|+++|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 243 ~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 243 KVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++|||++++++++++++|++++++|+++++|| +........|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 401 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVL 401 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEE
Confidence 999999999999999999999999999999999999999 4111113479999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|.||+|+++|++||++||
T Consensus 402 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft 479 (517)
T 3r31_A 402 DFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLC--PVEIPFGGSKQSGFGRENSAAALEHYS 479 (517)
T ss_dssp EECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCC--CTTSCBCCEETTEECCBSTGGGGGGSE
T ss_pred EeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhh
Confidence 999999999999999999999999999999999999999999999997543 346999999999999999999999999
Q ss_pred eeeEEEEcc
Q 007627 523 LVKSVVEDR 531 (595)
Q Consensus 523 ~~k~v~~~~ 531 (595)
+.|+|+.+.
T Consensus 480 ~~K~v~~~~ 488 (517)
T 3r31_A 480 ELKTVYVST 488 (517)
T ss_dssp EEEEEEECC
T ss_pred ceEEEEEcC
Confidence 999998765
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-104 Score=873.37 Aligned_cols=467 Identities=28% Similarity=0.483 Sum_probs=438.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++|+++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. +|+..+++.++|++...++..... .+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 112 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 187 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDT-IPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITR 187 (504)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccc--cccccceeeccCceEEEEECCCcchHHHHHH
Confidence 99999999999999984 699999999999998877643221 1111 1245678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+.+|+.|
T Consensus 188 ~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~----eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i 263 (504)
T 3ek1_A 188 KAAPALAAGCTMIVRPADLTPLTALALGVLAE----KAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLL 263 (504)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999998887755 6899999999999875 78999998 89999999999999999
Q ss_pred HHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCC
Q 007627 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (595)
Q Consensus 285 ~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (595)
++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 264 ~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 343 (504)
T 3ek1_A 264 MAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG 343 (504)
T ss_dssp HHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 365 ~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
.++++++|||+++.++++++++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 417 (504)
T 3ek1_A 344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAF 417 (504)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|+||+|+++|++||++||+.
T Consensus 418 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~ 495 (504)
T 3ek1_A 418 DTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLIS--NEVAPFGGVKQSGLGREGSKYGIEEYLET 495 (504)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCC--CSSSCBCCSGGGEESCBSTTTSGGGGEEE
T ss_pred CCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCcCCcCcCcCCCCCcHHHHHHhhce
Confidence 9999999999999999999999999999999999999999999986532 34699999999999999999999999999
Q ss_pred eEEEEc
Q 007627 525 KSVVED 530 (595)
Q Consensus 525 k~v~~~ 530 (595)
|+|+.+
T Consensus 496 K~v~~~ 501 (504)
T 3ek1_A 496 KYICSA 501 (504)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999864
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-104 Score=871.82 Aligned_cols=466 Identities=30% Similarity=0.465 Sum_probs=436.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|++++.++|.++|++++++|++|+++|
T Consensus 12 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 91 (505)
T 3prl_A 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEII 91 (505)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccc---cccceEEEecceEEEEEcCcchhhHhh
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++++++|+||+..++. +|+..+++.++|++++++++.... .+...... +...++.++|+|||++|+|||||+.+.
T Consensus 92 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 92 GELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 9999999999999985 699999999999999988865422 22110000 345789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++.+++ .++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll----~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 245 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEAL----ADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE 245 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHH----HHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 999999999999999999999999998887765 46899999999999965 78999998 899999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|++.|+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999998 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|. +++++|||++++++++++++|++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 395 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPII 395 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEEEEE
Confidence 999 999999999999999999999999999999999997 368999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.... .+.+||||+|+||+||++|++||++||
T Consensus 396 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~~PFGG~k~SG~Gr~~g~~~~~~f~ 474 (505)
T 3prl_A 396 RVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERG-PDHFPFLGVKKSGLGVQGIKPSLLSMT 474 (505)
T ss_dssp EESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSC-STTSCBCCEETTEESCBSHHHHHHHTE
T ss_pred EeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCC-CCCCCcCCcCcCCCCcCccHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999986533 356999999999999999999999999
Q ss_pred eeeEEEEcc
Q 007627 523 LVKSVVEDR 531 (595)
Q Consensus 523 ~~k~v~~~~ 531 (595)
+.|+|+.+.
T Consensus 475 ~~k~v~~~~ 483 (505)
T 3prl_A 475 RERVTVLNL 483 (505)
T ss_dssp EEEEEEEEC
T ss_pred ceEEEEEeC
Confidence 999998764
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-104 Score=869.41 Aligned_cols=474 Identities=30% Similarity=0.458 Sum_probs=441.0
Q ss_pred CCCcccccCCcccCCCCCCe-EEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 007627 46 PDNSFIYIPPRGRTPQSETK-VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (595)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~-~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~ 124 (595)
....++||+|+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 96 (503)
T 1a4s_A 17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp CCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence 34467899999998777778 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHh
Q 007627 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (595)
Q Consensus 125 ~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~ 204 (595)
+++|++++++|+||+..++ .+|+..+++.++|++++++++.. +..+.. .+...++.++|+|||++|+|||||+.+
T Consensus 97 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~ 171 (503)
T 1a4s_A 97 RDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMI 171 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHHH
Confidence 9999999999999999998 57999999999999999988754 222221 234678999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHH
Q 007627 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 205 ~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
.++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|.++.+++|++ ++|+|+||||+.+|+
T Consensus 172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~----~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~ 247 (503)
T 1a4s_A 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFH----EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGK 247 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 99999999999999999999999999999888765 689999999999995577899998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 248 ~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 327 (503)
T 1a4s_A 248 KVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVG 327 (503)
T ss_dssp HHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCC--CCCCcccCCeeeecCCCCCcccccccccCcee
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
+|.++++++|||++++++++++++|++++++|+++++||.....+. ...|+|++|||+.+++++|++++||+||||++
T Consensus 328 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 407 (503)
T 1a4s_A 328 DPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMS 407 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEE
Confidence 9999999999999999999999999999999999999997421000 03589999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhc
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~ 520 (595)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|+||+|+++|++||++
T Consensus 408 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ 485 (503)
T 1a4s_A 408 VLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSIS--PVEVPFGGYKMSGFGRENGQATVDY 485 (503)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSTTGGGGG
T ss_pred EEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999997653 3458999999999999999999999
Q ss_pred cceeeEEEEc
Q 007627 521 CCLVKSVVED 530 (595)
Q Consensus 521 ~t~~k~v~~~ 530 (595)
||+.|+|+.+
T Consensus 486 f~~~k~v~~~ 495 (503)
T 1a4s_A 486 YSQLKTVIVE 495 (503)
T ss_dssp SEEEEEEEEC
T ss_pred hcCceEEEEc
Confidence 9999999875
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-104 Score=871.30 Aligned_cols=469 Identities=25% Similarity=0.411 Sum_probs=440.4
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
...++||+|+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++++|++|++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEAD 102 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 44679999999988766 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++..+|+..+++.++|+++.++++... ..+.. ..+...++.++|+|||++|+|||||+.+++
T Consensus 103 ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 103 EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP-AAGEY--LPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCc-cccCC--cccccceEEEcCcceEEEECCCchHHHHHH
Confidence 999999999999999995589999999999999998875432 22111 134568899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~----ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~ 254 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIA----DI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKK 254 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----TT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHH----Hh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 999999999999999999999999999888876 46 9999999999965 68999998 8999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 255 i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (498)
T 4f3x_A 255 VLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNL 334 (498)
T ss_dssp HHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCC-eEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga-~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
|.++++++|||+++.++++++++|++++++|+ ++++||... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 335 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 410 (498)
T 4f3x_A 335 DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVT 410 (498)
T ss_dssp SSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEE
Confidence 99999999999999999999999999999999 999999842 2479999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+||++|++||++||
T Consensus 411 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~Gr~~G~~~l~~~t 488 (498)
T 4f3x_A 411 RFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLT--NEMPHGGIKQSGYGKDMSVYALEDYT 488 (498)
T ss_dssp EECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCSGGGEECCBSHHHHHHHTE
T ss_pred EeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC--CCCCcCCcCcCCcCccchHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999986654 45999999999999999999999999
Q ss_pred eeeEEEEc
Q 007627 523 LVKSVVED 530 (595)
Q Consensus 523 ~~k~v~~~ 530 (595)
+.|+|+.+
T Consensus 489 ~~k~v~~~ 496 (498)
T 4f3x_A 489 AVRHIMIN 496 (498)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 99999764
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-104 Score=871.07 Aligned_cols=470 Identities=26% Similarity=0.437 Sum_probs=438.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++|++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999999876678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcc-cccccceEEEecceEEEEEcCcchhhHhh
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
+|++++++|+||+..++..+|+..+++.++|+++.++++.... .+.... ......++.++|+|||++|+|||||+.++
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 195 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML 195 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHH
Confidence 9999999999999999865799999999999999988865432 222100 11235689999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|.+ +.+++|++ +||+|+||||+.+|+
T Consensus 196 ~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~ 271 (517)
T 2o2p_A 196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELTL----KAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGK 271 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----HTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHH----HhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 6899999999999965 78999998 899999999999999
Q ss_pred HHHHHhh-cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~~aa-~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++.|+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 ~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~v 351 (517)
T 2o2p_A 272 HIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKI 351 (517)
T ss_dssp HHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++||||+++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|
T Consensus 352 Gdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 427 (517)
T 2o2p_A 352 GNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV----PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMII 427 (517)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEE
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccC----CCCCCeECCEEEeCCCCCChhhhccccccEEEE
Confidence 9999999999999999999999999999999999999999742 136999999999999999999999999999999
Q ss_pred EeeCC--HHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 442 MKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 442 ~~~~~--~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
++|+| +||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+||++|.+||+
T Consensus 428 ~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~ 505 (517)
T 2o2p_A 428 SRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKT--DVAAPFGGFKQSGFGKDLGEAALN 505 (517)
T ss_dssp EEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCCGGGEECCBSHHHHHH
T ss_pred EEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCC--CCCCCcCCcCcCCcCccChHHHHH
Confidence 99999 99999999999999999999999999999999999999999987443 345999999999999999999999
Q ss_pred ccceeeEEEE
Q 007627 520 ACCLVKSVVE 529 (595)
Q Consensus 520 ~~t~~k~v~~ 529 (595)
+||+.|+|+.
T Consensus 506 ~~~~~k~v~~ 515 (517)
T 2o2p_A 506 EYLRIKTVTF 515 (517)
T ss_dssp TTEEEEEEEE
T ss_pred HhCCceEEEe
Confidence 9999999975
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-104 Score=866.39 Aligned_cols=468 Identities=28% Similarity=0.461 Sum_probs=439.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~---~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|++|+
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999887778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..|+..+|+..+++.++|++++++++..+. .+.. .+...++.++|+|||++|+|||||+.++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 176 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT-IPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLMF 176 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe-eecc---CCcceeEEecCCceEEEECCCcchHHHH
Confidence 99999999999999998877899999999999999998876542 2211 2345789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+|+
T Consensus 177 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 252 (501)
T 1bxs_A 177 LWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIK----EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGK 252 (501)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHH----HhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 6899999999999954 78999998 799999999999999
Q ss_pred HHHHHhh-cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~~aa-~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++.|+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 253 ~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 332 (501)
T 1bxs_A 253 LIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVL 332 (501)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCB
T ss_pred HHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++|||++++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|
T Consensus 333 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 408 (501)
T 1bxs_A 333 GNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 408 (501)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEEE
Confidence 9999999999999999999999999999999999999999742 136899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|.||+|+++|++|+++|
T Consensus 409 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~pfGG~k~SG~G~~~G~~~l~~f 486 (501)
T 1bxs_A 409 MKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEY 486 (501)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTT
T ss_pred EEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC--CCCCCCCCcCcCCcCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999997543 24599999999999999999999999
Q ss_pred ceeeEEEEc
Q 007627 522 CLVKSVVED 530 (595)
Q Consensus 522 t~~k~v~~~ 530 (595)
++.|+|+.+
T Consensus 487 ~~~K~v~~~ 495 (501)
T 1bxs_A 487 TEVKTVTIK 495 (501)
T ss_dssp EEEEEEEEE
T ss_pred hCeeEEEEc
Confidence 999999864
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-104 Score=865.56 Aligned_cols=467 Identities=28% Similarity=0.449 Sum_probs=436.1
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|++++++|++|+++
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSD 104 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999988888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEE-EecceEEEEEcCcchhhHhhH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~PlGVV~~I~p~N~P~~~~~ 206 (595)
|++++++|+||+..++..+|+..+++.++++++....+..+...+ .+...++. ++|+|||++|+|||||+.+.+
T Consensus 105 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (497)
T 3i44_A 105 MAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQVT 179 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHHH
Confidence 999999999999999965899999999999999887765433221 13446788 999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.
T Consensus 180 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~ 255 (497)
T 3i44_A 180 LKVIPALLAGCTMVLKPSEIAPLSAMLFAEILD----EAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKD 255 (497)
T ss_dssp HHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCcccHHHHHHHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence 999999999999999999999999998888755 6899999999999965 78999998 8999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.|++++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 256 i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (497)
T 3i44_A 256 ISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334 (497)
T ss_dssp HHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
|.++++++|||+++.++++++++|++++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++
T Consensus 335 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 413 (497)
T 3i44_A 335 GHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLP 413 (497)
T ss_dssp TTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCT-TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-cCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEe
Confidence 9999999999999999999999999999999999999942111 123699999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+. . ..+.+||||+|.||+||++|++||++||+
T Consensus 414 ~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~-~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~ 490 (497)
T 3i44_A 414 FNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGH-E--LPGGSYFGGVKFSGRAREGGLWGIKEFLD 490 (497)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETTC-C--CCTTCCBCCSGGGCCCCBSHHHHHHTTEE
T ss_pred cCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECCC-C--CCCCCCcCCcCcCcCCccchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999952 2 23459999999999999999999999999
Q ss_pred eeEEE
Q 007627 524 VKSVV 528 (595)
Q Consensus 524 ~k~v~ 528 (595)
.|+|+
T Consensus 491 ~K~v~ 495 (497)
T 3i44_A 491 TKAIS 495 (497)
T ss_dssp EEEES
T ss_pred eeEEE
Confidence 99985
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-104 Score=868.38 Aligned_cols=468 Identities=30% Similarity=0.453 Sum_probs=439.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~---~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|++++.++|.++|++++++|++|+
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999999887778999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..|+...|+..+++.++|++++++++..+. .+.. .+...++.++|+|||++|+|||||+.++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 175 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT-IPID---GDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-eecC---CCceEEEEEecCCcEEEECCCCchHHHH
Confidence 99999999999999998877899999999999999998876542 2211 2345789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+|+
T Consensus 176 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~ 251 (500)
T 1o04_A 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIK----EAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251 (500)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH----HhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 6899999999999954 78999998 799999999999999
Q ss_pred HHHHHhh-cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~~aa-~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++.|+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 252 ~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 331 (500)
T 1o04_A 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVV 331 (500)
T ss_dssp HHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++||||+++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|
T Consensus 332 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 407 (500)
T 1o04_A 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407 (500)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEEE
Confidence 9999999999999999999999999999999999999999742 136899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|.||+|+++|.+||++|
T Consensus 408 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~f 485 (500)
T 1o04_A 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF--GAQSPFGGYKMSGSGRELGEYGLQAY 485 (500)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCSGGGEESCBSTGGGGGGG
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999997543 24599999999999999999999999
Q ss_pred ceeeEEEEc
Q 007627 522 CLVKSVVED 530 (595)
Q Consensus 522 t~~k~v~~~ 530 (595)
++.|+|+.+
T Consensus 486 ~~~K~v~~~ 494 (500)
T 1o04_A 486 TEVKTVTVK 494 (500)
T ss_dssp EEEEEEEEE
T ss_pred cceEEEEEe
Confidence 999999865
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-104 Score=867.70 Aligned_cols=468 Identities=30% Similarity=0.508 Sum_probs=438.8
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++|+++
T Consensus 10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (495)
T 3b4w_A 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL 89 (495)
T ss_dssp SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999887778999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++..+|+..+++.++|++++++++.... .+.+ .+...++.++|+|||++|+|||||+.++++
T Consensus 90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 165 (495)
T 3b4w_A 90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVN 165 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHH
Confidence 999999999999999865799999999999999998876532 2211 233568999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|+
T Consensus 166 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 166 KIAPALLAGCTIVLKPAAETPLTANALAEVFA----EVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHTTCEEEEECBTTSCHHHHHHHHHHH----HTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCEEEEecCCccHHHHHHHHHHHH----HhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999888766 589999999999995578999998 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 321 (495)
T 3b4w_A 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPS 321 (495)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTT
T ss_pred HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++|||++++++++++++|++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (495)
T 3b4w_A 322 DPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399 (495)
T ss_dssp CTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred cCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecC
Confidence 99999999999999999999999999999999999974210 1268999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. . .+.+||||+|.||+||++|++||++||+.|
T Consensus 400 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~--~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k 476 (495)
T 3b4w_A 400 TEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-F--DPGSPFGGYKNSGIGRENGPEGVEHFTQQK 476 (495)
T ss_dssp SHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-C--CTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-C--CCCCCCCCCCCCCcCccchHHHHHHhccee
Confidence 9999999999999999999999999999999999999999999875 2 346999999999999999999999999999
Q ss_pred EEEEc
Q 007627 526 SVVED 530 (595)
Q Consensus 526 ~v~~~ 530 (595)
+|+.+
T Consensus 477 ~v~~~ 481 (495)
T 3b4w_A 477 SVLLP 481 (495)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 99764
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-104 Score=872.65 Aligned_cols=470 Identities=29% Similarity=0.440 Sum_probs=442.0
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~--~~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
.++||+|+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| ..|++++.++|.++|++++++|++|+
T Consensus 23 ~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (528)
T 3u4j_A 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQ 102 (528)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 5789999999988889999999999 99999999999999999999999999 78999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..++ .+|+..+++.++|++++++++.. +..+.. ..+...++.++|+|||++|+|||||+.+.
T Consensus 103 ~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 103 EELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEG-QTHNNI--GDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCE-EEECCS--CTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-eeeccC--CCCceeEEEeccceEEEEECCCccHHHHH
Confidence 999999999999999999 78999999999999999888653 222221 12456889999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|+||+|+|.+ +.+++|++ +||+|+||||+.+|+
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 254 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAR----EAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGT 254 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----HHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 9999999999999999999999999999888765 5799999999999954 78999998 899999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|++.|++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 255 ~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 334 (528)
T 3u4j_A 255 KLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFG 334 (528)
T ss_dssp HHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++||+++++++++++++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 335 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 411 (528)
T 3u4j_A 335 DPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIG---REAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTL 411 (528)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEEC---TTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC---CCCCcEecceEEecCCCCCccccceeeccEEEEE
Confidence 9999999999999999999999999999999999999998421 1179999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|.||+||++|++||++||
T Consensus 412 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft 489 (528)
T 3u4j_A 412 TFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYS 489 (528)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSTTHHHHHTE
T ss_pred EeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhh
Confidence 999999999999999999999999999999999999999999999997544 346999999999999999999999999
Q ss_pred eeeEEEEcc
Q 007627 523 LVKSVVEDR 531 (595)
Q Consensus 523 ~~k~v~~~~ 531 (595)
+.|+|+.+.
T Consensus 490 ~~K~v~~~~ 498 (528)
T 3u4j_A 490 QFKGVHVTL 498 (528)
T ss_dssp EEEEEEEES
T ss_pred ceEEEEEeC
Confidence 999998754
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-103 Score=866.48 Aligned_cols=471 Identities=23% Similarity=0.350 Sum_probs=439.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
+.+||+|+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++|+++|
T Consensus 24 ~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 101 (500)
T 2j6l_A 24 NEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVL 101 (500)
T ss_dssp EECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999994 5678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++ .+|+..+++.++|++++++++... ..+.. ..+...++.++|+|||++|+|||||+.+++++
T Consensus 102 a~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (500)
T 2j6l_A 102 GSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGP-ILPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGWN 177 (500)
T ss_dssp HHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCB-EECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence 999999999999998 689999999999999888765432 11111 01234578899999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
+++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~ 257 (500)
T 2j6l_A 178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257 (500)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996688999997 9999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (595)
.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 258 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 337 (500)
T 2j6l_A 258 MVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWD 337 (500)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCC
Q 007627 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (595)
Q Consensus 367 ~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~ 446 (595)
+++++|||++++++++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 338 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (500)
T 2j6l_A 338 PNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVM----DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN 413 (500)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECC
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCC
Confidence 99999999999999999999999999999999999742 23689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeEEecCcHHHHHHHH--HHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIA--AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 447 ~~eAi~~aN~~~~gL~asVft~d~~~~~~~~--~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+||||+++|+++|||++||||+|.+++++++ +++++|+|+||+.... ....+||||+|.||+|+++|.+|+++|++.
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~ 492 (500)
T 2j6l_A 414 EEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKHTGGGRESGSDAWKQYMRR 492 (500)
T ss_dssp HHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTC-CCTTSEECCSGGGCSCCEESTTGGGGGEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCcc-CCCCCCcCCcCCCCCCCcchHHHHHHhhce
Confidence 9999999999999999999999999999999 7799999999986543 234589999999999999999999999999
Q ss_pred eEEEEc
Q 007627 525 KSVVED 530 (595)
Q Consensus 525 k~v~~~ 530 (595)
|+|+.+
T Consensus 493 k~v~~~ 498 (500)
T 2j6l_A 493 STCTIN 498 (500)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999763
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-103 Score=861.19 Aligned_cols=468 Identities=28% Similarity=0.439 Sum_probs=439.7
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI 86 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998777789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..|+. +|+..+++.++|++++++++..+.. +.. ..+...++.++|+|||++|+|||||+.+++++
T Consensus 87 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 87 SALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999985 7999999999999999888765432 211 12346789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|+
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVD----EIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHH----HhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999888765 5799999999999975 67899997 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 318 (479)
T 2imp_A 239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318 (479)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 366 A-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 366 ~-~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
+ +++++|||+++.++++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~ 394 (479)
T 2imp_A 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF 394 (479)
T ss_dssp TCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCC----CSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEE
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCceECCEEEeCCCCCCHHHhCccCCceEEEEee
Confidence 8 89999999999999999999999999999999999742 136899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ .+.+||||+|+||+|+++|++||++||+.
T Consensus 395 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~ 472 (479)
T 2imp_A 395 DTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQT 472 (479)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEE
T ss_pred CCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCe
Confidence 9999999999999999999999999999999999999999999997665 34699999999999999999999999999
Q ss_pred eEEEEc
Q 007627 525 KSVVED 530 (595)
Q Consensus 525 k~v~~~ 530 (595)
|+|+.+
T Consensus 473 k~v~~~ 478 (479)
T 2imp_A 473 QVVYLQ 478 (479)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 999764
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-103 Score=863.76 Aligned_cols=470 Identities=26% Similarity=0.429 Sum_probs=436.7
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 007627 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (595)
Q Consensus 45 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~ 124 (595)
.+...++||+|+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|
T Consensus 20 ~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (495)
T 1wnd_A 20 GLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEEN 98 (495)
T ss_dssp --CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 334456899999998766 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHh
Q 007627 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (595)
Q Consensus 125 ~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~ 204 (595)
+++|++++++|+||+..++...|+..+++.++|++++++++.. +..+.. ..+...++.++|+|||++|+|||||+.+
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (495)
T 1wnd_A 99 GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG-LAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMM 175 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEE-ECBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccccCC--CCCceeEEeeecCCeEEEECCCcchHHH
Confidence 9999999999999999998544999999999999999887643 222211 1234578999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHH
Q 007627 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (595)
Q Consensus 205 ~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g 281 (595)
+++++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+|
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAK----DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHT----TT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHH----Hh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999999988876 46 9999999999954 78999998 79999999999999
Q ss_pred HHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 282 ~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
+.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 251 ~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 330 (495)
T 1wnd_A 251 EHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKS 330 (495)
T ss_dssp HHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcC-CeEeecCC-CCCCCCCCCCcccCCeeeecCCCCCcccccccccCce
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~G-a~vl~gG~-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl 439 (595)
|+|.++++++|||+++.++++++++|++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||+
T Consensus 331 g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 405 (495)
T 1wnd_A 331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVV 405 (495)
T ss_dssp CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred CCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceE
Confidence 999999999999999999999999999999999 99999997 31 268999999999999999999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
+|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+||++|++||+
T Consensus 406 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~ 483 (495)
T 1wnd_A 406 SVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLE 483 (495)
T ss_dssp EEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSHHHHHH
T ss_pred EEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCCcCcCCccchHHHHH
Confidence 999999999999999999999999999999999999999999999999997543 346999999999999999999999
Q ss_pred ccceeeEEEEc
Q 007627 520 ACCLVKSVVED 530 (595)
Q Consensus 520 ~~t~~k~v~~~ 530 (595)
+||+.|+|+.+
T Consensus 484 ~f~~~k~v~~~ 494 (495)
T 1wnd_A 484 DYTVVRHVMVK 494 (495)
T ss_dssp TTEEEEEEEEE
T ss_pred HhhCeEEEEec
Confidence 99999999753
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-103 Score=865.25 Aligned_cols=471 Identities=26% Similarity=0.432 Sum_probs=438.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999998877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++. +|+..+++.++|++++++++... ..+.. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 107 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 182 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182 (515)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhh
Confidence 9999999999999986 89999999999999998887542 22221 12346789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|+
T Consensus 183 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~ 258 (515)
T 2d4e_A 183 IAPALAFGNTVVLKPAEWSPFTATKLAEILK----EADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM 258 (515)
T ss_dssp HHHHHHTTCCEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhHHHHcCCeeeecCCCCcHHHHHHHHHHHH----HhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 9999999999999999999999999888765 6899999999999965 78999998 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
++|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 338 (515)
T 2d4e_A 259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPL 338 (515)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC----CCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL----SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~----~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
++++++|||++++++++++++|++++++|+++++||..... +....|+|++|||+.+ +++|++++||+||||++|
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v 417 (515)
T 2d4e_A 339 DPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVA 417 (515)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEE
T ss_pred cccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEE
Confidence 99999999999999999999999999999999999974210 0012699999999999 999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+||++|++||++|
T Consensus 418 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~~ 495 (515)
T 2d4e_A 418 IPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVR--HLPTPFGGVKGSGDRREGGTYALDFY 495 (515)
T ss_dssp EEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCC--CTTSCBCCSGGGBCSCBSHHHHHHHH
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999997542 34599999999999999999999999
Q ss_pred ceeeEEEEc
Q 007627 522 CLVKSVVED 530 (595)
Q Consensus 522 t~~k~v~~~ 530 (595)
|+.|+|+.+
T Consensus 496 ~~~K~v~~~ 504 (515)
T 2d4e_A 496 TDLKTIALP 504 (515)
T ss_dssp EEEEEEEEE
T ss_pred CceeEEEEc
Confidence 999999875
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-103 Score=858.24 Aligned_cols=468 Identities=28% Similarity=0.493 Sum_probs=438.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|
T Consensus 10 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 89 (481)
T 3jz4_A 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDL 89 (481)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++. +|+..+++.++|++....+.... ..+.. ..+...+++++|+|||++|+|||||+.+.+++
T Consensus 90 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 90 ARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGD-TIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 9999999999999984 69999999999999887664321 11111 12456789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++.++.+++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.|+
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~ 241 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAI----RAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999998887755 5799999999999965 78999998 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.|+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 321 (481)
T 3jz4_A 242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGL 321 (481)
T ss_dssp HHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTT
T ss_pred HHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++|||+++.++++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 397 (481)
T 3jz4_A 322 DNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFK 397 (481)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred cCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEEC
Confidence 999999999999999999999999999999999999842 2468999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|
T Consensus 398 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k 475 (481)
T 3jz4_A 398 DEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIK 475 (481)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC--CSSSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhcee
Confidence 999999999999999999999999999999999999999999997553 345999999999999999999999999999
Q ss_pred EEEEc
Q 007627 526 SVVED 530 (595)
Q Consensus 526 ~v~~~ 530 (595)
+|+..
T Consensus 476 ~v~~~ 480 (481)
T 3jz4_A 476 YMCIG 480 (481)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99753
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-103 Score=868.50 Aligned_cols=468 Identities=22% Similarity=0.383 Sum_probs=438.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+. ++.+++++||+| |+++++++.++.+|+++++++|++||+.|++++..+|.++|++++++|++|+++
T Consensus 38 ~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (538)
T 3qan_A 38 YPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHE 115 (538)
T ss_dssp ECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999987 678999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. +|+..+++.++|+++++.+++.++..+.. .+...++.++|+|||++|+|||||+.++++
T Consensus 116 la~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 116 FSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 99999999999999985 59999999999999986666655544322 245788999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i 267 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLE----DAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRL 267 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH----HTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHH----HhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999998887755 6899999999999965 78999998 89999999999999999
Q ss_pred HHHhhcC------CCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh
Q 007627 285 MRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (595)
Q Consensus 285 ~~~aa~~------l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~ 358 (595)
++.|+++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 268 ~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 347 (538)
T 3qan_A 268 YERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKN 347 (538)
T ss_dssp HHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTT
T ss_pred HHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHh
Confidence 9999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCc
Q 007627 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (595)
Q Consensus 359 l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPV 438 (595)
+++|+|.++++++|||+++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||
T Consensus 348 ~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 422 (538)
T 3qan_A 348 LTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD----SSTGFFIQPTIIADLDPEAVIMQEEIFGPV 422 (538)
T ss_dssp CCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSE
T ss_pred ccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcC----CCCCceeCCeeeecCCCCChhhCCCcCCcE
Confidence 999999999999999999999999999999999999 999999842 127999999999999999999999999999
Q ss_pred eeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHH
Q 007627 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEG 517 (595)
Q Consensus 439 l~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~g 517 (595)
++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.......+.+||||+|.||+| +++|++|
T Consensus 423 l~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~g 502 (538)
T 3qan_A 423 VAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDY 502 (538)
T ss_dssp EEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTT
T ss_pred EEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHH
Confidence 999999999999999999999999999999999999999999999999996444433456999999999999 9999999
Q ss_pred HhccceeeEEEEcc
Q 007627 518 LRACCLVKSVVEDR 531 (595)
Q Consensus 518 l~~~t~~k~v~~~~ 531 (595)
|++||+.|+|+.+.
T Consensus 503 l~~ft~~k~v~~~~ 516 (538)
T 3qan_A 503 LALHMQAKTVSEMY 516 (538)
T ss_dssp GGGGEEEEEEEEEC
T ss_pred HHHhhCeEEEEEec
Confidence 99999999998764
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-102 Score=860.67 Aligned_cols=482 Identities=27% Similarity=0.370 Sum_probs=426.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
+..++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++|++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 90 (508)
T 3r64_A 11 DATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHRE 90 (508)
T ss_dssp CTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHH
Confidence 34679999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++. .|+..+++.++++++++++... ..+.. ...+...++.++|+|||++|+|||||+.+++
T Consensus 91 ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 166 (508)
T 3r64_A 91 EIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSI 166 (508)
T ss_dssp HHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHH
Confidence 999999999999999985 5999999999999988776433 22211 0124568899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHH-HHHHHHHHHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~-~~l~~~~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
+++++||++||+||+|||+.+|+++ .++.+++ .++|+|+|++|+|+|+ .+.+++|++ ++|+|+||||+.+|+
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~ 242 (508)
T 3r64_A 167 RSVAPALAVGNAVVIKPASDTPVTGGVIPARIF----EEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGR 242 (508)
T ss_dssp HHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHH----HTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHH
T ss_pred HHHHHHHhcCCEEEEECCCCChHHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHH
Confidence 9999999999999999999999999 8777764 5799999999999997 478999998 899999999999999
Q ss_pred HHHHHhhc--CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhcc
Q 007627 283 MIMRNASK--TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (595)
Q Consensus 283 ~v~~~aa~--~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (595)
.|++.|++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 243 ~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (508)
T 3r64_A 243 RVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIP 322 (508)
T ss_dssp HHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 99999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCcee
Q 007627 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 361 ~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
+|+|.++++++|||+++.++++++++|++|+++|+++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 323 ~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 395 (508)
T 3r64_A 323 TGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLIS 395 (508)
T ss_dssp BSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred CCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceEE
Confidence 9999999999999999999999999999999999999999972 689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhc
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~ 520 (595)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ ..+.+||||+|.||+|++||++||++
T Consensus 396 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ 474 (508)
T 3r64_A 396 VLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEE 474 (508)
T ss_dssp EEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHH
T ss_pred EEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999998655 34569999999999999999999999
Q ss_pred cceeeEEEEccccccccccCCCCCCCCC
Q 007627 521 CCLVKSVVEDRWWPYIKTKIPKPIQYPV 548 (595)
Q Consensus 521 ~t~~k~v~~~~~~~~~~t~~~~~~~~p~ 548 (595)
||+.|+|+.+... ..-+++.||+.
T Consensus 475 ft~~k~v~~~~~~----~~~~~~~~~~~ 498 (508)
T 3r64_A 475 FTTDRWIGIKRSA----ENLYFQSHHHH 498 (508)
T ss_dssp TEEEEEEEEECCS----TTCCCC-----
T ss_pred hhceEEEEEeccc----chhcchhhccC
Confidence 9999999886532 12233466664
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-102 Score=854.38 Aligned_cols=452 Identities=26% Similarity=0.433 Sum_probs=427.9
Q ss_pred eEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhh
Q 007627 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS 144 (595)
Q Consensus 65 ~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~ 144 (595)
+++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|+||+..++.
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred hhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecC
Q 007627 145 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (595)
Q Consensus 145 ~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 224 (595)
+|+..+++.++|++++++++..+..... .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 159 (484)
T 3ros_A 85 -EEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA 159 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 7999999999999999999887654322 24578899999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChh-HHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCC
Q 007627 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (595)
Q Consensus 225 ~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~-~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGG 301 (595)
+.+|+++.++.+++. ++|+|+|++|+|+|+++ .++ |++ +||+|+||||+.+|+.|++.|++++||+++||||
T Consensus 160 ~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGG 234 (484)
T 3ros_A 160 HNVPGSAALTAKIIK----RAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGG 234 (484)
T ss_dssp TTCHHHHHHHHHHHH----HHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCChHHHHHHHHHHH----HhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCC
Confidence 999999998888765 57999999999999874 566 887 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHH
Q 007627 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (595)
Q Consensus 302 k~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~ 381 (595)
|||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++++++
T Consensus 235 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 314 (484)
T 3ros_A 235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKE 314 (484)
T ss_dssp CCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCc
Q 007627 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (595)
Q Consensus 382 ~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL 461 (595)
+++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 315 rv~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL 390 (484)
T 3ros_A 315 KLEAQVKEAIDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGL 390 (484)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCS
T ss_pred HHHHHHHHHHHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999842 25799999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccc
Q 007627 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 532 (595)
Q Consensus 462 ~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~ 532 (595)
++||||+|.++++++++++++|+|+||+.... .+.+||||+|+||+|+++|++||++||+.|+|+.+..
T Consensus 391 ~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 391 GSSVIGSDIDRAKKVSAQIETGMTVINGRWIT--SGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp CEEEECSCHHHHHHHHHHSCSSCCEETSCCCC--CTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred EEEEECCCHHHHHHHHHhCccceEEECCCCCC--CCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 99999999999999999999999999996443 3469999999999999999999999999999988653
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-102 Score=856.18 Aligned_cols=465 Identities=24% Similarity=0.362 Sum_probs=434.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 96 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 96 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4689999999764 7899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccc--cccceEEEecceEEEEEcCcchhhHhh
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
|++++++|+||+..++. +|+..+++.++|++++++++.. +..+...... +...++.++|+|||++|+|||||+.++
T Consensus 97 la~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 174 (501)
T 1uxt_A 97 FAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDA 174 (501)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHH
Confidence 99999999999999986 7999999999999999888643 2222211011 235789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+++.+++|++ ++|+|+||||+.+|+.
T Consensus 175 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~ 250 (501)
T 1uxt_A 175 VNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL----DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGER 250 (501)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence 9999999999999999999999999999888765 589999999999997778899998 8999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.|+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 251 i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 328 (501)
T 1uxt_A 251 VVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGD 328 (501)
T ss_dssp HHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCC
Confidence 999988 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCC-cccCCeeeecCC---CCCcccccccccCce
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEAFGPIM 439 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g-~~~~PTvl~~v~---~~~~i~~eE~FGPVl 439 (595)
|.++++++|||++++++++++++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||+
T Consensus 329 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl 401 (501)
T 1uxt_A 329 PRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVA 401 (501)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEE
T ss_pred ccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceE
Confidence 9999999999999999999999999999999999999972 57 999999999999 999999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
+|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. +...+.+||||+|+||+|+++|++||+
T Consensus 402 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~ 480 (501)
T 1uxt_A 402 LAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVE 480 (501)
T ss_dssp EEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHH
T ss_pred EEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHH
Confidence 9999999999999999999999999999999999999999999999999873 223456999999999999999999999
Q ss_pred ccceeeEEEEcc
Q 007627 520 ACCLVKSVVEDR 531 (595)
Q Consensus 520 ~~t~~k~v~~~~ 531 (595)
+||+.|+|+.+.
T Consensus 481 ~f~~~k~v~~~~ 492 (501)
T 1uxt_A 481 AVTAYKTIVFNY 492 (501)
T ss_dssp HHEEEEEEEEEC
T ss_pred HhCceeEEEEec
Confidence 999999998753
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-102 Score=854.28 Aligned_cols=465 Identities=29% Similarity=0.475 Sum_probs=435.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999764 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..|+. .|+..+++.++|+++++++.. .+..+.. ..+...++.++|+|||++|+|||||+.+++++
T Consensus 91 a~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~-g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (487)
T 2w8n_A 91 ARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY-GDIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRK 166 (487)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCC-CEEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc-CcccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 9999999999999985 699999999999999887743 2222221 12456789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeee---CCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT---GFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~---g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
+++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+ |.+ +.+++|++ ++|+|+||||+.+|+
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~ 242 (487)
T 2w8n_A 167 VGAALAAGCTVVVKPAEDTPFSALALAELAS----QAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK 242 (487)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHHH----HHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 9999999999999999999999998888765 6899999999999 854 67899998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh-ccC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA 361 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~-l~~ 361 (595)
.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++
T Consensus 243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~ 322 (487)
T 2w8n_A 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV 322 (487)
T ss_dssp HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCc-ccCCeeeecCCCCCcccccccccCcee
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~-~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
|+|.++++++|||+++.++++++++|++++++|+++++||.. ...|+ |++|||+.+++++|++++||+||||++
T Consensus 323 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~-----~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 397 (487)
T 2w8n_A 323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR-----HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAP 397 (487)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSB-----CTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEE
T ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-----CCCCCceECCEEEecCCCcchhhhcccccceEE
Confidence 999999999999999999999999999999999999999973 23688 999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhc
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~ 520 (595)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. ..+||||+|.||+|+++|++||++
T Consensus 398 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~~~SG~G~~~G~~~l~~ 475 (487)
T 2w8n_A 398 VIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISS--VECPFGGVKQSGLGREGSKYGIDE 475 (487)
T ss_dssp EEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCC--TTSCBCCSGGGEESCBSTTTGGGG
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCC--CCCCCCCCCCCCcCCCchHHHHHH
Confidence 999999999999999999999999999999999999999999999999976653 349999999999999999999999
Q ss_pred cceeeEEEEc
Q 007627 521 CCLVKSVVED 530 (595)
Q Consensus 521 ~t~~k~v~~~ 530 (595)
||+.|+|+.+
T Consensus 476 f~~~k~v~~~ 485 (487)
T 2w8n_A 476 YLELKYVCYG 485 (487)
T ss_dssp GEEEEEEEEC
T ss_pred hcCccEEEEe
Confidence 9999999764
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-102 Score=851.74 Aligned_cols=469 Identities=28% Similarity=0.406 Sum_probs=436.7
Q ss_pred CCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh
Q 007627 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (595)
Q Consensus 61 ~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~ 140 (595)
...++|+++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+.
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS 82 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEE
Q 007627 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220 (595)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VV 220 (595)
.+ ..|+...++.+++++..+.+++++....... .+...+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 83 ~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 83 IT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred HH--HHHHHHHHHHHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 44 3699999999999999888887665443321 2345677899999999999999999999999999999999999
Q ss_pred EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHhCCCEEEEeCChhHHHHHHHHhhcCCCcEeecCC
Q 007627 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (595)
Q Consensus 221 lKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElG 300 (595)
+||||.+|+++..+.+++ .++|+|+|++++++|+.+.+..|+..+|+|+||||+.+|+.|++.+++++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~----~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMAL----NTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHH----TTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhh----hhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCC
Confidence 999999999998877664 4789999999999998899999998999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHH
Q 007627 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (595)
Q Consensus 301 Gk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~ 380 (595)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCC
Q 007627 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (595)
Q Consensus 381 ~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~g 460 (595)
+++++++++++++|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~---~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 391 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVE---ELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYG 391 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCE---EETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHhhCceeccCCccc---ccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCC
Confidence 999999999999999999999842 23468999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceeeEEEEcccccccccc
Q 007627 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPYIKTK 539 (595)
Q Consensus 461 L~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k~v~~~~~~~~~~t~ 539 (595)
|++||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++|++.|+|+.+.- .
T Consensus 392 L~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~------~ 465 (474)
T 4h7n_A 392 LSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTN------S 465 (474)
T ss_dssp SEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECS------S
T ss_pred CeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCC------C
Confidence 99999999999999999999999999999877766667999999999998 8999999999999999988763 3
Q ss_pred CCCCCCC
Q 007627 540 IPKPIQY 546 (595)
Q Consensus 540 ~~~~~~~ 546 (595)
.+.|+||
T Consensus 466 ~~~p~w~ 472 (474)
T 4h7n_A 466 TSDPWWF 472 (474)
T ss_dssp SCCTTSC
T ss_pred CCCCCCc
Confidence 4567777
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-102 Score=851.94 Aligned_cols=468 Identities=27% Similarity=0.412 Sum_probs=416.6
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++|+++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (485)
T 4dng_A 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDI 86 (485)
T ss_dssp CSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999998888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++. .|+..+++.++++++.+++. ..+..+.. ...+...+++++|+|||++|+|||||+.+.+++
T Consensus 87 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~-~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (485)
T 4dng_A 87 IMMIARETGGTIIKST-IELEQTIAILDEAMTYTGEL-GGVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRS 163 (485)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGC-SCEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-CCeecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHH
Confidence 9999999999999996 49999999999999988753 33322211 112456789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHH-HHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~-~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
+++||++||+||+|||+.+|+++ .++.+++ .++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|
T Consensus 164 ~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 164 IAPAIALGNSVVHKPDIQTAISGGTIIAKAF----EHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHTHHHHHHH----HHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHH----HHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 99999999999999999999999 8777665 56899999999999987 58899998 89999999999999999
Q ss_pred HHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCC
Q 007627 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (595)
Q Consensus 285 ~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (595)
++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 365 ~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
.++++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~ 392 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKA 392 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEE
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEEe
Confidence 999999999999999999999999999999999999972 6899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ ..+.+||||+|.||+|++||++|+++||+.
T Consensus 393 ~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~ 471 (485)
T 4dng_A 393 GSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVT 471 (485)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHHEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhce
Confidence 9999999999999999999999999999999999999999999998655 345699999999999999999999999999
Q ss_pred eEEEEcc
Q 007627 525 KSVVEDR 531 (595)
Q Consensus 525 k~v~~~~ 531 (595)
|+|+.+.
T Consensus 472 k~v~~~~ 478 (485)
T 4dng_A 472 KWISIQK 478 (485)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998754
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-102 Score=849.83 Aligned_cols=464 Identities=27% Similarity=0.442 Sum_probs=416.1
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++|+++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 87 (478)
T 3ty7_A 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDI 87 (478)
T ss_dssp CEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 57899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++...|+..+++.++++++.++++.... .....++.++|+|||++|+|||||+.+.+++
T Consensus 88 a~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 88 VQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHH
Confidence 99999999999999967899999999999999988865432 1245789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|+
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~ 235 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFD----KVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM 235 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHH----HHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHH----HhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 9999999999999999999999998888765 5799999999999965 78999987 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.|+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 236 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 315 (478)
T 3ty7_A 236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPR 315 (478)
T ss_dssp CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++|||++++++++++++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 316 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 394 (478)
T 3ty7_A 316 EDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394 (478)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence 9999999999999999999999999999999999995211 112479999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+ .. ....+||||+|+||+|+++|++||++||+.|
T Consensus 395 ~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k 471 (478)
T 3ty7_A 395 DLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AG--RKPDLPFGGYKQSGLGREWGDYGIEEFLEVK 471 (478)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC------------------------CCGGGEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcCeE
Confidence 99999999999999999999999999999999999999999999 22 2345899999999999999999999999999
Q ss_pred EEE
Q 007627 526 SVV 528 (595)
Q Consensus 526 ~v~ 528 (595)
+|+
T Consensus 472 ~v~ 474 (478)
T 3ty7_A 472 SIA 474 (478)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-101 Score=849.96 Aligned_cols=467 Identities=24% Similarity=0.373 Sum_probs=434.4
Q ss_pred cccccCCcccCCCCCCeEEeecCC-CCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457999999864 5789999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. +|+..+++.++|++++++++..+...... ..+...++.++|+|||++|+|||||+.++++
T Consensus 116 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 99999999999999985 79999999999999999888764321111 1234678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+|+.|
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i 268 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFH----EAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH----HHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHH----HhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHH
Confidence 99999999999999999999999998888765 5899999999999954 78999998 79999999999999999
Q ss_pred HHHhh------cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh
Q 007627 285 MRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (595)
Q Consensus 285 ~~~aa------~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~ 358 (595)
++.|+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 269 ~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 348 (516)
T 1uzb_A 269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAER 348 (516)
T ss_dssp HHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred HHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHh
Confidence 99998 889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCc
Q 007627 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (595)
Q Consensus 359 l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPV 438 (595)
+++|+| ++++++|||+++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||
T Consensus 349 ~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPV 422 (516)
T 1uzb_A 349 LSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPV 422 (516)
T ss_dssp CCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSE
T ss_pred ccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCce
Confidence 999999 99999999999999999999999999999 899999731 236899999999999999999999999999
Q ss_pred eeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCC-CCcHHH
Q 007627 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEG 517 (595)
Q Consensus 439 l~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~G~~g 517 (595)
++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+|+ ++|.++
T Consensus 423 l~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~ 502 (516)
T 1uzb_A 423 LSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDY 502 (516)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHH
T ss_pred EEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHH
Confidence 9999999999999999999999999999999999999999999999999997655445569999999999995 689999
Q ss_pred HhccceeeEEEEc
Q 007627 518 LRACCLVKSVVED 530 (595)
Q Consensus 518 l~~~t~~k~v~~~ 530 (595)
+++||+.|+|+.+
T Consensus 503 l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 503 LRLFLEMKAVAER 515 (516)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHHcCCeeEEEec
Confidence 9999999999763
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-101 Score=847.05 Aligned_cols=469 Identities=22% Similarity=0.337 Sum_probs=434.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998777789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++. +|+..+++.++|++...+. +..+..+.. ..+...++.++|+|||++|+|||||+.+++++
T Consensus 86 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~-~~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 86 AHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSL-MMGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHH-HCEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH-hcCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999984 7999999999998754443 333322110 12345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
+++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~ 237 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFE----KAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYK 237 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 9999999999999999999999999888765 689999999999997788999998 7999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCce-EEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~r-v~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|.
T Consensus 238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~ 316 (486)
T 1t90_A 238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL 316 (486)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999 999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++||||++.+++++++++++++++|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~ 393 (486)
T 1t90_A 317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVK 393 (486)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeC
Confidence 999999999999999999999999999999999999742 12368999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC--CCCcHHHHhccce
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCL 523 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~G~~gl~~~t~ 523 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ...+.+||||+|.||+| |++|++|+++||+
T Consensus 394 ~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~ 472 (486)
T 1t90_A 394 NLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVP-APMAFFPFSGWKSSFFGTLHANGKDSVDFYTR 472 (486)
T ss_dssp SHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCCTTSCCCCEETTEESSSCSSHHHHHHHTEE
T ss_pred CHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCCcCCCCcCCCCCCccchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998533 22346999999999999 8999999999999
Q ss_pred eeEEEEc
Q 007627 524 VKSVVED 530 (595)
Q Consensus 524 ~k~v~~~ 530 (595)
.|+|+.+
T Consensus 473 ~k~v~~~ 479 (486)
T 1t90_A 473 KKVVTAR 479 (486)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999764
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-101 Score=843.97 Aligned_cols=460 Identities=32% Similarity=0.478 Sum_probs=430.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999997654 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCccccc----ccc-eEEEecceEEEEEcCcchhhH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFH 203 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~v~~~PlGVV~~I~p~N~P~~ 203 (595)
++++++|+||+..|+ ..|+..+++.++|++++++++.... .+.. ..+ ... ++.++|+|||++|+|||||+.
T Consensus 83 a~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 83 GAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 999999999999998 5799999999999999988776432 1211 112 345 899999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhH
Q 007627 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (595)
Q Consensus 204 ~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~ 280 (595)
++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~ 234 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFA----EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGI 234 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHH
Confidence 999999999999999999999999999999888765 5899999999999975 67899998 7999999999999
Q ss_pred HHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhcc
Q 007627 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (595)
Q Consensus 281 g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (595)
|+.|++.|+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 235 g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 312 (475)
T 1euh_A 235 GERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312 (475)
T ss_dssp HHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 999999988 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCcee
Q 007627 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 361 ~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
+|+|.+ ++++|||+++++++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 313 ~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~ 384 (475)
T 1euh_A 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLP 384 (475)
T ss_dssp BSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred CCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEE
Confidence 999998 999999999999999999999999999999999972 589999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecC-CCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~-~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+ +..+ .+.+||||+|.||+|+++|++||+
T Consensus 385 v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~ 462 (475)
T 1euh_A 385 IIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIE 462 (475)
T ss_dssp EEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHH
T ss_pred EEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHH
Confidence 9999999999999999999999999999999999999999999999999 5443 346999999999999999999999
Q ss_pred ccceeeEEEEc
Q 007627 520 ACCLVKSVVED 530 (595)
Q Consensus 520 ~~t~~k~v~~~ 530 (595)
+||+.|+|+.+
T Consensus 463 ~~~~~k~v~~~ 473 (475)
T 1euh_A 463 AMTTVKSVVFD 473 (475)
T ss_dssp HTEEEEEEEEE
T ss_pred HhCCeeEEEEe
Confidence 99999999764
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-100 Score=834.03 Aligned_cols=455 Identities=29% Similarity=0.509 Sum_probs=429.5
Q ss_pred CCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChh
Q 007627 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (595)
Q Consensus 62 ~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ 141 (595)
+...++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++|+++|++++++|+||+..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEE
Q 007627 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (595)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVl 221 (595)
++. .|+..+++.++|+++.++++..+... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 85 ~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl 159 (462)
T 3etf_A 85 QAR-AEVTKSAALCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLL 159 (462)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 985 69999999999999998887665421 1234568899999999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecC
Q 007627 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299 (595)
Q Consensus 222 Kps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lEl 299 (595)
|||+.+|+++.++.+++ .++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|++.|+++++|+++||
T Consensus 160 Kps~~tp~~~~~l~~~l----~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lEl 235 (462)
T 3etf_A 160 KHAPNVTGCAQMIARIL----AEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLEL 235 (462)
T ss_dssp ECCTTCHHHHHHHHHHH----HHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ECCCCCcHHHHHHHHHH----HHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEc
Confidence 99999999998887765 4689999999999998888899997 89999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHH
Q 007627 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379 (595)
Q Consensus 300 GGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~ 379 (595)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||++..+
T Consensus 236 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~ 315 (462)
T 3etf_A 236 GGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDL 315 (462)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCC
Q 007627 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459 (595)
Q Consensus 380 ~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~ 459 (595)
++++++++++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 316 ~~~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~ 391 (462)
T 3etf_A 316 RDELHQQVQASVAEGARLLLGGEKI----AGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEF 391 (462)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCccc----CCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCC
Confidence 9999999999999999999999742 247999999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEcc
Q 007627 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 460 gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
||++||||+|.++++++++++++|+|+||++... ...+||||+|+||+|+++|++||++||+.|+|+.+|
T Consensus 392 gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 392 GLSATIFTADDTLAAEMAARLECGGVFINGYSAS--DARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp CSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 9999999999999999999999999999997643 345999999999999999999999999999998876
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-100 Score=829.36 Aligned_cols=449 Identities=28% Similarity=0.436 Sum_probs=412.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhc
Q 007627 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 162 (595)
Q Consensus 83 ~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 162 (595)
.+.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|+||+..|+...|+..+++.+++++++.
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999997789999999999999998
Q ss_pred hhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 007627 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (595)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l 242 (595)
++|..+..........+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~-- 172 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ-- 172 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH--
Confidence 888766543332222345688999999999999999999999999999999999999999999999999999988765
Q ss_pred HhcCCCCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHH
Q 007627 243 AAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 321 (595)
Q Consensus 243 ~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~ 321 (595)
+ +|+|++|+|+|+.+.+.+|+. ++|+|+||||+.+|+.|+++|++++||+++|||||||+||++|||++.|++.++
T Consensus 173 --a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~ 249 (469)
T 3sza_A 173 --Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249 (469)
T ss_dssp --H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHH
T ss_pred --h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHH
Confidence 4 999999999998877888888 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecC
Q 007627 322 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401 (595)
Q Consensus 322 ~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG 401 (595)
+++|.|+||.|++++|||||+++||+|+++|+++++++ .|++.++++++|||++++++++++++| +|+++++||
T Consensus 250 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG 323 (469)
T 3sza_A 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGG 323 (469)
T ss_dssp HHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECC
T ss_pred HHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCC
Confidence 99999999999999999999999999999999999998 599988999999999999999999998 699999999
Q ss_pred CCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc
Q 007627 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 481 (595)
Q Consensus 402 ~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~ 481 (595)
.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 324 ~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~ 398 (469)
T 3sza_A 324 TG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETS 398 (469)
T ss_dssp CE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCC
T ss_pred cc-----CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCC
Confidence 84 2478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCcch
Q 007627 482 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN 551 (595)
Q Consensus 482 ~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~~~ 551 (595)
+|+|+||+...+...+.+||||+|+||+|+++|.+|+++||+.|+|+.++++. ....+++|||+.+
T Consensus 399 ~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~----~~~~~~~yppy~~ 464 (469)
T 3sza_A 399 SGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMN----DEGLKVRYPPSPA 464 (469)
T ss_dssp CSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSC----CGGGGGGSSSCCC
T ss_pred cceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCccc----ccccccccCCCCc
Confidence 99999999866555567999999999999999999999999999999887531 1124578988644
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-99 Score=834.30 Aligned_cols=481 Identities=20% Similarity=0.267 Sum_probs=438.8
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh-H
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH-Q 125 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~-~ 125 (595)
...+||+|+|+.+. ..+.++||+| |+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++++|+++ +
T Consensus 63 ~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 140 (563)
T 4e3x_A 63 AIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRR 140 (563)
T ss_dssp ECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTH
T ss_pred cCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccH
Confidence 46799999999864 4678899998 899999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..++...|+..+++.++|+++.++++........+ .....+++++|+|||++|+|||||+...
T Consensus 141 ~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 141 AEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHHH
Confidence 9999999999999999996544999999999999999887664322221 1233456677789999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
.+++++|| +||+||+|||+.+|+++.++++++. ++|+|+|+||+|+|++ +.+++|++ +||+|+||||+.+|+
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~----eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~ 292 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILR----EAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFK 292 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 99999999 5999999999999999998887765 6899999999999976 67899997 999999999999999
Q ss_pred HHHHHhhcCCCc------EeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHH
Q 007627 283 MIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356 (595)
Q Consensus 283 ~v~~~aa~~l~p------v~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~ 356 (595)
.|+++|+++++| +++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++
T Consensus 293 ~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~ 372 (563)
T 4e3x_A 293 HLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEH 372 (563)
T ss_dssp HHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHH
Confidence 999999999985 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCC-CCCCCCcccccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCccccccc
Q 007627 357 KSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 434 (595)
Q Consensus 357 ~~l~~G~~-~~~~~~~G~li~~~~~~~~~~~i~~a~~-~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~ 434 (595)
+++++|+| .++++++||||++.++++++++|+++++ +|+++++||... ...|+|++|||+.+++++|++++||+
T Consensus 373 ~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEi 448 (563)
T 4e3x_A 373 SRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEEI 448 (563)
T ss_dssp HTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSCC
T ss_pred HhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCCC
Confidence 99999999 9999999999999999999999999996 899999999742 24799999999999999999999999
Q ss_pred ccCceeEEeeCC--HHHHHHHh-hcCCCCceeEEecCcHHHHHHHHHHhc--cCCeeecCCCcccccCCCCCCCcCCCCC
Q 007627 435 FGPIMPIMKFNT--DEEVVKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGF 509 (595)
Q Consensus 435 FGPVl~v~~~~~--~~eAi~~a-N~~~~gL~asVft~d~~~~~~~~~~l~--~G~v~IN~~~~~~~~~~~PfGG~~~SG~ 509 (595)
||||++|++|+| +||||+++ |+++|||++||||+|.+++++++++++ +|+|+||+..+......+||||+|.||+
T Consensus 449 FGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~ 528 (563)
T 4e3x_A 449 FGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGT 528 (563)
T ss_dssp CSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBC
T ss_pred cCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCC
Confidence 999999999987 79999999 799999999999999999999999976 9999999986655445699999999999
Q ss_pred C-CCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCc
Q 007627 510 G-RFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVA 549 (595)
Q Consensus 510 G-~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~ 549 (595)
| +.+|.++|++|++.|+|..+. ..|.++|||+.
T Consensus 529 g~~~~G~~~l~~~~~~k~v~~~~-------~~~~~~~yp~~ 562 (563)
T 4e3x_A 529 NDKPGGPHYILRWTSPQVIKETH-------KPLGDWRYSYM 562 (563)
T ss_dssp CCCTTSTTGGGGGBCCEEEEEEC-------SCCCCSSCTTC
T ss_pred CCccCCHHHHHHhCceEEEEEeC-------cCCCcccCCCC
Confidence 8 899999999999999998753 23567899964
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-99 Score=822.55 Aligned_cols=449 Identities=27% Similarity=0.387 Sum_probs=405.3
Q ss_pred CeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhh
Q 007627 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143 (595)
Q Consensus 64 ~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea 143 (595)
...+++||.||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEec
Q 007627 144 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (595)
Q Consensus 144 ~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKp 223 (595)
..+|+..+++.++++++++++|..++..+......+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 76799999999999999999988765444332223457889999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCc
Q 007627 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (595)
Q Consensus 224 s~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk 302 (595)
|+.+|+++.++++++.++ +|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|+++|++++||+++|||||
T Consensus 166 s~~tp~t~~~l~~l~~~a-----lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk 240 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEA-----FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGK 240 (457)
T ss_dssp CTTCHHHHHHHHHHHHHH-----CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCChHHHHHHHHHHHHh-----CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCC
Confidence 999999999999988753 999999999997788999999 99999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHH
Q 007627 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (595)
Q Consensus 303 ~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~ 382 (595)
||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++|||++++++++
T Consensus 241 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~r 315 (457)
T 3lns_A 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQR 315 (457)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHH
T ss_pred CCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987 5554 9999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhc-CCCCc
Q 007627 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND-SRYGL 461 (595)
Q Consensus 383 ~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~-~~~gL 461 (595)
++++|+++ ++++++||.. ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||
T Consensus 316 v~~~i~~a---~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL 387 (457)
T 3lns_A 316 LVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPL 387 (457)
T ss_dssp HHHHHHHC---CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCS
T ss_pred HHHHHHhc---CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCe
Confidence 99999986 3599999973 246899999999999999999999999999999999999999999999 99999
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEc
Q 007627 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 462 ~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~ 530 (595)
++||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+||++|++||++||+.|+|+..
T Consensus 388 ~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 388 AVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 999999999999999999999999999986554456799999999999999999999999999999753
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-97 Score=817.38 Aligned_cols=460 Identities=21% Similarity=0.334 Sum_probs=427.6
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
++||+|+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|+
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999864 4679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||+..++. +|+..+++.++|+++..+++....... ..+...+++++|+|||++|+|||||+.++++++
T Consensus 86 ~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (490)
T 3ju8_A 86 RVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHI 160 (490)
T ss_dssp HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHH
Confidence 999999999999985 799999999999998887765432211 123456778999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~ 287 (595)
++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|+++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 236 (490)
T 3ju8_A 161 VPALLAGNCVVFKPSELTPKVAELTLKAWI----QAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQ 236 (490)
T ss_dssp HHHHHHTCEEEEECCTTCHHHHHHHHHHHH----HTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCcHHHHHHHHHHH----HhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999998887755 689999999999998889999998 79999999999999999999
Q ss_pred hhcCCCcE-eecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccch-HHHHHHHHHHHHHhccCCC-C
Q 007627 288 ASKTLTPV-TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-P 364 (595)
Q Consensus 288 aa~~l~pv-~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v-~d~f~~~L~~~~~~l~~G~-~ 364 (595)
|+++++|+ ++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |
T Consensus 237 aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~ 316 (490)
T 3ju8_A 237 FGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFD 316 (490)
T ss_dssp TTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred hhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCC
Confidence 99999998 8999999999999999999999999999999999999999999999996 9999999999999999999 9
Q ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 365 ~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
.++++++|||+++++++++++++++++++|+++++||... +..|+|++|||+. ++++|++++||+||||++|++|
T Consensus 317 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~ 391 (490)
T 3ju8_A 317 EQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQP----IDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRY 391 (490)
T ss_dssp CSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCC----STTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEE
T ss_pred CCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCCEEccEEEE-eCCCCccccccccccEEEEEEe
Confidence 9999999999999999999999999999999999999743 2579999999999 9999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+. .+.+||||+|.||++ ++++|++.
T Consensus 392 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~~PfGG~~~SG~~------~~~~~~~~ 464 (490)
T 3ju8_A 392 SDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGA-ASSAPFGGIGASGNH------RPSAYYAA 464 (490)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCC-CTTSEECCCGGGBSS------CCEETTHH
T ss_pred CCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCC-CCCCCcCCccccchh------HHHhhhee
Confidence 99999999999999999999999999999999999999999999976533 345999999999985 58999999
Q ss_pred eEEEEcc
Q 007627 525 KSVVEDR 531 (595)
Q Consensus 525 k~v~~~~ 531 (595)
|+|+...
T Consensus 465 k~v~~~~ 471 (490)
T 3ju8_A 465 DYCAYPV 471 (490)
T ss_dssp HHHEEEE
T ss_pred EEEEEec
Confidence 9987653
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-96 Score=815.92 Aligned_cols=473 Identities=16% Similarity=0.221 Sum_probs=420.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A-~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+++|.++|.++|++++++|++|+++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999997654 479999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcC------cccccCCcccccccceEEEecc-eEEEEEcCcch
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNY 200 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~~Pl-GVV~~I~p~N~ 200 (595)
|++++++|+||+..|+. .|+..+++.++|++..+++... ++..+... ......++.++|+ |||++|+||||
T Consensus 86 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~ 163 (534)
T 2y53_A 86 YYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNF 163 (534)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTC
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCch
Confidence 99999999999999985 6999999999999987755422 11111100 0011357889997 99999999999
Q ss_pred hhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEeeeCChh-HHHHHHhCCCEEEEeCCh
Q 007627 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAE-TGEALVSSVDKIIFVGSP 278 (595)
Q Consensus 201 P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aG-lp~g~v~vv~g~~~-~~~~L~~~vd~I~ftGS~ 278 (595)
|+.++++++++||++||+||+|||+.+|+++..+++++. ++| +|+|+||+|+|+++ .++.| ..+|+|+||||+
T Consensus 164 P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~----~aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~ 238 (534)
T 2y53_A 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVV----DAGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSA 238 (534)
T ss_dssp TTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHH----HHTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCH
Confidence 999999999999999999999999999999998888765 589 79999999999653 23322 179999999999
Q ss_pred hHHHHHHHHhh--cCCCcEeecCCCcceEEEcCCC-----CHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHH
Q 007627 279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351 (595)
Q Consensus 279 ~~g~~v~~~aa--~~l~pv~lElGGk~p~IV~~da-----Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~ 351 (595)
.+|+.|++.|+ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999999875 8999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC--CCCCCCcccCCeeeecCCCC--C
Q 007627 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--M 427 (595)
Q Consensus 352 L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~--~~~~~g~~~~PTvl~~v~~~--~ 427 (595)
|+++++++++|+|.++++++|||+++.++++++++|+++ .+|+++++||..... +....|+|++|||+.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 689999999974210 01136899999999999987 6
Q ss_pred cccccccccCceeEEeeC---CH-----HHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh--ccCCeeecCCCcc----
Q 007627 428 KLMQEEAFGPIMPIMKFN---TD-----EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASN---- 493 (595)
Q Consensus 428 ~i~~eE~FGPVl~v~~~~---~~-----~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l--~~G~v~IN~~~~~---- 493 (595)
++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++..+
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~ 477 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQT 477 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCC
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccccc
Confidence 999999999999999999 99 999999999999999999999999999999999 8999999986421
Q ss_pred ---cccCCCCCCCcCCCCCCCC-CcHHHHhccceeeEEEEcc
Q 007627 494 ---YMCQSLPFGGVKDSGFGRF-AGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 494 ---~~~~~~PfGG~~~SG~G~~-~G~~gl~~~t~~k~v~~~~ 531 (595)
...+.+||||+|.||+|++ +|.+|+++|++.|++...+
T Consensus 478 ~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 478 GHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp CSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred ccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence 1234699999999999999 6999999999999998754
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-95 Score=846.83 Aligned_cols=469 Identities=22% Similarity=0.360 Sum_probs=437.7
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
...+||+|+|+.+ +.+++++||+| |+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++|++
T Consensus 531 ~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~ 608 (1026)
T 4f9i_A 531 TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF 608 (1026)
T ss_dssp EECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999864 67899999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++. +|+..+++.++|++..++++..+..... ..+..+++.++|+|||++|+|||||+.+.+
T Consensus 609 eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 609 ELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp HHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 999999999999999984 6999999999999999988765443221 134567899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+.+|+.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~----eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~ 760 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFR----EAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLR 760 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHH----HhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHH
Confidence 999999999999999999999999998888765 6899999999999976 68999998 8999999999999999
Q ss_pred HHHHhh------cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHH
Q 007627 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (595)
Q Consensus 284 v~~~aa------~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~ 357 (595)
|++.|+ ++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 761 I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~ 840 (1026)
T 4f9i_A 761 IIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840 (1026)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHH
Confidence 999998 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccC
Q 007627 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (595)
Q Consensus 358 ~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGP 437 (595)
++++|+|.++++++||+|++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 841 ~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGP 915 (1026)
T 4f9i_A 841 ATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGP 915 (1026)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSS
T ss_pred hcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCc
Confidence 9999999999999999999999999999999999999 999999731 22499999999999999999999999999
Q ss_pred ceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCC-CCcHH
Q 007627 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVE 516 (595)
Q Consensus 438 Vl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~G~~ 516 (595)
|++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+..++...+.+||||+|.||+|+ .+|++
T Consensus 916 Vl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~ 995 (1026)
T 4f9i_A 916 VLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPD 995 (1026)
T ss_dssp EEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTT
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHH
Confidence 99999999999999999999999999999999999999999999999999998766555669999999999995 68999
Q ss_pred HHhccceeeEEEEcc
Q 007627 517 GLRACCLVKSVVEDR 531 (595)
Q Consensus 517 gl~~~t~~k~v~~~~ 531 (595)
+|++|++.|+|+.+.
T Consensus 996 ~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 996 YLLHFMDPRVVTENT 1010 (1026)
T ss_dssp TGGGGEEEEEEEEEC
T ss_pred HHHHhceEEEEEEec
Confidence 999999999998765
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-94 Score=798.77 Aligned_cols=459 Identities=18% Similarity=0.211 Sum_probs=417.8
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEE-EecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~-~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
...++||+|+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+.|++++..+|.++|++++++|++|+
T Consensus 28 ~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (528)
T 3v4c_A 28 PKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARA 102 (528)
T ss_dssp CCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 3367899999998643 89999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchh--hcCcccc---cCCcccccccceEEEecceEEEEEcCcch
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~v~~~PlGVV~~I~p~N~ 200 (595)
++|++++++|+||+..++. +|+..+++.++|+++.+++ ++.+... +......+...++.++|+|||++|+||||
T Consensus 103 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 181 (528)
T 3v4c_A 103 EAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNF 181 (528)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSS
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcc
Confidence 9999999999999999884 7999999999999998877 4432211 11000123456889999999999999999
Q ss_pred hhHhhH--HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEe
Q 007627 201 PFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFV 275 (595)
Q Consensus 201 P~~~~~--~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ft 275 (595)
|+.+.+ +++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|+||+|+|.+ +.+++|++ +||+|+||
T Consensus 182 P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fT 261 (528)
T 3v4c_A 182 PLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261 (528)
T ss_dssp TTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEE
T ss_pred hHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEE
Confidence 999865 99999999999999999999999999999999999999999999999999965 78999998 89999999
Q ss_pred CChhHHHHHHHHhhcCC--CcEeecCCCcceEEEcCCC---CHHHHHHHHHHHHHHcCCCCCCCCceEEEccc-hHHHHH
Q 007627 276 GSPGVGRMIMRNASKTL--TPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFV 349 (595)
Q Consensus 276 GS~~~g~~v~~~aa~~l--~pv~lElGGk~p~IV~~da---Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~-v~d~f~ 349 (595)
||+.+|+.|++.|++++ ||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +||+|+
T Consensus 262 GS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~ 341 (528)
T 3v4c_A 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFT 341 (528)
T ss_dssp SCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHH
T ss_pred CChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHH
Confidence 99999999999999999 9999999999999999999 88999999999999999999999999999997 999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCC---
Q 007627 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT--- 426 (595)
Q Consensus 350 ~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~--- 426 (595)
++|++++++++.| +++||+++.++.++++++++ ++|+++++||. ..|+|++|||+.+++++
T Consensus 342 ~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~-------~~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 342 TAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATE-------SSGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCC-------CCTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCC-------cCCceeccEEEEecCccccc
Confidence 9999999998754 57899999888888887764 47999999997 26899999999988887
Q ss_pred CcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecC--cHHHHHHHHHHhc--cCCeeecCCCcc-cccCCCCC
Q 007627 427 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASN-YMCQSLPF 501 (595)
Q Consensus 427 ~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~--d~~~~~~~~~~l~--~G~v~IN~~~~~-~~~~~~Pf 501 (595)
|++++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++ +|+|+||++.+. ...+.+||
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pf 485 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVH 485 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence 899999999999999999999999999999999999999999 8899999999998 999999997553 23456999
Q ss_pred CC-cCCCCCCCCC--cHHHHhccceeeEE
Q 007627 502 GG-VKDSGFGRFA--GVEGLRACCLVKSV 527 (595)
Q Consensus 502 GG-~~~SG~G~~~--G~~gl~~~t~~k~v 527 (595)
|| +|.||+|++| |++|+++|++.|++
T Consensus 486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 486 GGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 99 9999999987 99999999999975
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-92 Score=781.17 Aligned_cols=450 Identities=17% Similarity=0.225 Sum_probs=407.4
Q ss_pred CCCCCeEEeecCCCCcEE-EEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCC
Q 007627 60 PQSETKVQCYEPATMKYL-GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK 138 (595)
Q Consensus 60 ~~~~~~~~~~~P~tg~~l-~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk 138 (595)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 446778999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhhHHHhHHHHHHHHHHhchh--hcCcccc---cCCcccccccceEEEecceEEEEEcCcchhhHhh--HHHHHH
Q 007627 139 TMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLA 211 (595)
Q Consensus 139 ~~~ea~~~Ei~~~~~~l~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~--~~~l~~ 211 (595)
+..++ .+|+..+++.++|+++++++ ++.+... +..........++.++|+|||++|+|||||+.+. ++++++
T Consensus 83 ~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ 161 (510)
T 1ez0_A 83 PEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 161 (510)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHH
Confidence 99887 57999999999999998876 5543210 1000001113578999999999999999999985 499999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHHHHh
Q 007627 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (595)
Q Consensus 212 ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~a 288 (595)
||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|. .+.+++|++ .||+|+||||+.+|+.|++.|
T Consensus 162 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 241 (510)
T 1ez0_A 162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241 (510)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999995 478999998 799999999999999999999
Q ss_pred hcCC--CcEeecCCCcceEEEcCCCCHH--HHHHHHHHHHHHcCCCCCCCCceEEEccc-hHHHHHHHHHHHHHhccCCC
Q 007627 289 SKTL--TPVTLELGGKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 289 a~~l--~pv~lElGGk~p~IV~~daDl~--~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~ 363 (595)
++++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++.
T Consensus 242 a~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-- 319 (510)
T 1ez0_A 242 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP-- 319 (510)
T ss_dssp HHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC--
T ss_pred hccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC--
Confidence 9996 9999999999999999999999 99999999999999999999999999999 999999999999999864
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHH-hcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCC---CcccccccccCce
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDAL-DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIM 439 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~-~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~---~~i~~eE~FGPVl 439 (595)
||++++.+.+++.++|++++ ++|+++++||. +|+|++|||+.+++++ |++++||+||||+
T Consensus 320 --------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl 383 (510)
T 1ez0_A 320 --------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQS 383 (510)
T ss_dssp --------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEE
T ss_pred --------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeE
Confidence 57888999999999999999 47999999986 2899999999988877 9999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcH--HHHHHHHHHh--ccCCeeecCCCccc-ccCCCCCCC-cCCCCCCCC-
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HRAREIAAQI--QCGVAAINDFASNY-MCQSLPFGG-VKDSGFGRF- 512 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~--~~~~~~~~~l--~~G~v~IN~~~~~~-~~~~~PfGG-~~~SG~G~~- 512 (595)
+|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++.... ..+.+|||| +|+||+|+.
T Consensus 384 ~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~ 463 (510)
T 1ez0_A 384 LIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST 463 (510)
T ss_dssp EEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC
T ss_pred EEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCC
Confidence 9999999999999999999999999999987 7899999999 79999999875432 234589999 799999854
Q ss_pred -CcHHHHhccceeeEEE
Q 007627 513 -AGVEGLRACCLVKSVV 528 (595)
Q Consensus 513 -~G~~gl~~~t~~k~v~ 528 (595)
+|++||++|++.|++.
T Consensus 464 ~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 464 SVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SSSGGGGGGGEEEEEEE
T ss_pred CccHHHHHHhheEEEEc
Confidence 8999999999988764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-88 Score=789.49 Aligned_cols=435 Identities=22% Similarity=0.355 Sum_probs=404.9
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHH
Q 007627 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL 159 (595)
Q Consensus 80 v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~ 159 (595)
++.++.+|+++++++|++||..|+++|.++|.++|+++++.|++|+++|++++++|+||+..++ .+|+..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999999999998 579999999999999
Q ss_pred HhchhhcCcc-cccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 007627 160 SEGEKWLKPE-YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (595)
Q Consensus 160 ~~~~~~~~~~-~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~ 238 (595)
+.++++.... ..+.. .+..+++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++
T Consensus 623 ~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell 699 (1001)
T 3haz_A 623 AQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL 699 (1001)
T ss_dssp HHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence 9988765432 12211 2457889999999999999999999999999999999999999999999999999888876
Q ss_pred HHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhc---CCCcEeecCCCcceEEEcCCCCH
Q 007627 239 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASK---TLTPVTLELGGKDAFIVCDDVDV 313 (595)
Q Consensus 239 ~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~---~l~pv~lElGGk~p~IV~~daDl 313 (595)
. ++|+|+|+||+|+|+++.+++|++ +||+|+||||+.+|+.|++.+++ +++|+++|||||||+||++|||+
T Consensus 700 ~----eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADl 775 (1001)
T 3haz_A 700 H----EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALP 775 (1001)
T ss_dssp H----HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCH
T ss_pred H----HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCH
Confidence 5 579999999999998755999998 79999999999999999999886 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhc
Q 007627 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 393 (595)
Q Consensus 314 ~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~ 393 (595)
+.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||||++.++++++++|++++++
T Consensus 776 d~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~ 855 (1001)
T 3haz_A 776 EQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE 855 (1001)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCC--HHHHHHHhhcCCCCceeEEecCcHH
Q 007627 394 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQH 471 (595)
Q Consensus 394 Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~--~~eAi~~aN~~~~gL~asVft~d~~ 471 (595)
| ++ +||.. ...|+|++|||+.+ ++|.+++||+||||++|++|++ +||||+++|+++|||++||||+|.+
T Consensus 856 g-~v-~gg~~-----~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~ 926 (1001)
T 3haz_A 856 A-RL-HFAGP-----APEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDD 926 (1001)
T ss_dssp S-EE-EEECC-----CCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHH
T ss_pred C-eE-ecccc-----CCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHH
Confidence 8 88 88873 24699999999975 7899999999999999999986 7999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceeeEEEEcc
Q 007627 472 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 472 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k~v~~~~ 531 (595)
+++++++++++|+|+||+...+...+.+||||+|.||+| +.+|++||++||+.|+|+.+.
T Consensus 927 ~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 927 SIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred HHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 999999999999999999876655556899999999999 568899999999999998865
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-85 Score=709.74 Aligned_cols=409 Identities=16% Similarity=0.167 Sum_probs=337.9
Q ss_pred EeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-------CCC
Q 007627 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT-------GKT 139 (595)
Q Consensus 67 ~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~-------Gk~ 139 (595)
-|+||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+ ||+
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999 699
Q ss_pred hh----hhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhc
Q 007627 140 MV----DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFS 215 (595)
Q Consensus 140 ~~----ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaa 215 (595)
.. ++ .+|+..+++.++|++++++++..+. .+......+...++.++|+|||++|+||| |++.+ +++++||++
T Consensus 90 ~~~rl~~a-~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaa 165 (463)
T 2h5g_A 90 LLKRLSLS-TSKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIAS 165 (463)
T ss_dssp HHHTTCCC-HHHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHH
T ss_pred hhhhhhhh-HHHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHc
Confidence 87 45 4799999999999999988876543 12111012345689999999999999777 77766 899999999
Q ss_pred CCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCC
Q 007627 216 GNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293 (595)
Q Consensus 216 GN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~ 293 (595)
||+||+|||+.+|+++.++++++.++|.++| |+|+||+|+|+.+.++.|++ +||+|+||||+.+|+.|++.|+ +|
T Consensus 166 GN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~ 242 (463)
T 2h5g_A 166 GNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GI 242 (463)
T ss_dssp TCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CC
Confidence 9999999999999999999999999998889 99999999995578899987 7999999999999999999988 99
Q ss_pred cEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCccc
Q 007627 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373 (595)
Q Consensus 294 pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~ 373 (595)
|+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++|| ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hH
Confidence 9999999999999999999999999999999999 999999999999999998 23
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHH
Q 007627 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 453 (595)
Q Consensus 374 li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~ 453 (595)
+ + ++++++++++|++++.||.. ...|+|+ +++|++++||+||||++|++|+|+||||++
T Consensus 297 ~-----~---~~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~ 355 (463)
T 2h5g_A 297 L-----F---DQIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDH 355 (463)
T ss_dssp H-----H---HHHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHH
T ss_pred H-----H---HHHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHH
Confidence 2 2 34588888999999855431 1234442 578999999999999999999999999999
Q ss_pred hhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC--CC--CcHHHHhccceeeEEEE
Q 007627 454 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RF--AGVEGLRACCLVKSVVE 529 (595)
Q Consensus 454 aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~--~G~~gl~~~t~~k~v~~ 529 (595)
+|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+| ++ +|++||++||+.|+|+.
T Consensus 356 aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~ 433 (463)
T 2h5g_A 356 IHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF--SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLR 433 (463)
T ss_dssp HHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEE
T ss_pred HHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC--CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEE
Confidence 9999999999999999999999999999999999997654 345999999999999 76 99999999999999987
Q ss_pred cc
Q 007627 530 DR 531 (595)
Q Consensus 530 ~~ 531 (595)
+.
T Consensus 434 ~~ 435 (463)
T 2h5g_A 434 GK 435 (463)
T ss_dssp CS
T ss_pred CC
Confidence 64
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-82 Score=691.08 Aligned_cols=421 Identities=18% Similarity=0.201 Sum_probs=375.6
Q ss_pred EecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHH
Q 007627 79 YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL 158 (595)
Q Consensus 79 ~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~ 158 (595)
+++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+|+++|++++++|+||+..++...++...++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 44566789999999999999999999999999999999999999999999999999999999888655665555555544
Q ss_pred HHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 007627 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (595)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~ 238 (595)
++..+. .. ... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+||||.+|.|+..+++++
T Consensus 85 ~~~~~~-~g--~~~---~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll 158 (464)
T 3k9d_A 85 IKDMKT-IG--MLK---EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRII 158 (464)
T ss_dssp HTTCCC-SE--EEE---EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hhcccc-cc--eec---cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHH
Confidence 433211 00 000 012456788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCC-CcceEEEcCCCCHH
Q 007627 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCDDVDVP 314 (595)
Q Consensus 239 ~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElG-Gk~p~IV~~daDl~ 314 (595)
.+++.++|+|+|++|+|+|. .+.+++|++ +||+|+||||+. +++++++++||+ +|+| ||+|+||++|||++
T Consensus 159 ~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 159 SEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHH
Confidence 99999999999999999995 488999998 799999999998 467788899999 7888 99999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHH-------HhccCCCCC-CCCCCcccccCHHHHHHHHHH
Q 007627 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSEKLQNL 386 (595)
Q Consensus 315 ~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~-------~~l~~G~~~-~~~~~~G~li~~~~~~~~~~~ 386 (595)
.|++.+++|+|+|+||.|++++|||||+++||+|+++|+++. +.+++|++. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986 456778876 678899999999999999999
Q ss_pred HHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHH----HHhhcCCCCce
Q 007627 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV----KLANDSRYGLG 462 (595)
Q Consensus 387 i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi----~~aN~~~~gL~ 462 (595)
+++++.+|+++++||.. +++++|++. ||+||||++|++|+|+|||| +++|+++|||+
T Consensus 314 ~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~ 374 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHT 374 (464)
T ss_dssp TTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCe
Confidence 99999999999999871 567888865 89999999999999999997 79999999999
Q ss_pred eEEecCcHHHHHHHHHHhccCCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEc
Q 007627 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 463 asVft~d~~~~~~~~~~l~~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~ 530 (595)
+||||+|.++++++++++++|+|+||++..+ ...+.+|||| +.||.|+++|..|+++|++.|+|...
T Consensus 375 a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 375 LIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 9999999999999999999999999998653 2346799998 78999999999999999999999753
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-82 Score=689.52 Aligned_cols=400 Identities=15% Similarity=0.140 Sum_probs=328.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhhhhhHHHh-HHHHHHHHHHh
Q 007627 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASLGEIMT-TCEKITWLLSE 161 (595)
Q Consensus 87 ~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~~Ei~~-~~~~l~~~~~~ 161 (595)
.+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+||+. .++..+|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8876679999 99999999999
Q ss_pred chhhcCcccccCCc-c---c-ccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHH
Q 007627 162 GEKWLKPEYRSSGR-S---M-IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236 (595)
Q Consensus 162 ~~~~~~~~~~~~~~-~---~-~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~ 236 (595)
++++..+....... . . .+...++.++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++.++++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 88876432211110 0 0 1345689999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHHHHHHh----cCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcC
Q 007627 237 IIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (595)
Q Consensus 237 ~~~~~l~~----aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~ 309 (595)
++.++|.+ +|+|+|++|+|+ ++ +.++.|++ ++|+|+||||+.+|+.|++.| +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 99999999 999999999999 65 67888887 799999999999999999887 799999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC---CCCCCCCCCcccccCHHHHHHHHHH
Q 007627 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 386 (595)
Q Consensus 310 daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~---G~~~~~~~~~G~li~~~~~~~~~~~ 386 (595)
|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+ +++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcc
Confidence 99999999999999999999 99999999999999 9999999999999987 76521 445
Q ss_pred -HHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEE
Q 007627 387 -VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465 (595)
Q Consensus 387 -i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asV 465 (595)
|++++ ++++||+ | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 310 ~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 372 (468)
T 1vlu_A 310 YFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAI 372 (468)
T ss_dssp HHHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEE
T ss_pred cccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEE
Confidence 66665 4667764 4 789997 7899999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCC-----CcCCCCCCCCCcHHHHhccceeeEEEEcc
Q 007627 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG-----GVKDSGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 466 ft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfG-----G~~~SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
||+|.++++++++++++|+|+||++... .+.+||| |+|.||+|++ |++|+++|++.|+|+...
T Consensus 373 ~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 373 VTENKANAEKFMKGVDSSGVYWNASTRF--ADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp ECSCHHHHHHHHHHCCCSEEEESSCGGG--CC-----------------------CCSGGGEEEEEEEECS
T ss_pred EeCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999999997653 3358999 9999999999 999999999999998754
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-79 Score=660.42 Aligned_cols=393 Identities=19% Similarity=0.215 Sum_probs=332.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhhhh-------hHHHhHHH
Q 007627 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE 153 (595)
Q Consensus 85 ~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~ 153 (595)
.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+. .++.. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 35543 37888888
Q ss_pred HHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 007627 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (595)
Q Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~ 233 (595)
.++++++..+.. . +..+......+...++.++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++.+
T Consensus 105 ~l~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-G-EMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-T-CEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-C-ccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 888888765431 1 1111100012346789999999999999999 8 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEeeeCC-hh-HHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcC
Q 007627 234 YFRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (595)
Q Consensus 234 l~~~~~~~l~~aGlp~g~v~vv~g~-~~-~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~ 309 (595)
+.+++.++|.++|+|+|++|+|+|. .+ .++.|.. ++|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 9999999999999999999999984 43 6777775 799999999999999999877 799999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC---CCCCCCCCCcccccCHHHHHHHHHH
Q 007627 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 386 (595)
Q Consensus 310 daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~---G~~~~~~~~~G~li~~~~~~~~~~~ 386 (595)
|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..++
T Consensus 258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence 99999999999999999999 9999999999999999999999999999987 6542 2456
Q ss_pred HHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEe
Q 007627 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466 (595)
Q Consensus 387 i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVf 466 (595)
++++. .| ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 320 i~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 372 (444)
T 4ghk_A 320 LEAAG-------------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIV 372 (444)
T ss_dssp HHHTT-------------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEE
T ss_pred HHhcc-------------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 65542 11 12 35689999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC----CCCcHHHHhccceeeEEEEcc
Q 007627 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 467 t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~G~~gl~~~t~~k~v~~~~ 531 (595)
|+|.++++++++++++|+|+||++..+. +.+||||.|.||+| +++|++||++||+.|+|+...
T Consensus 373 t~d~~~a~~~a~~l~aG~V~vN~~~~~~--~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 373 TEDHDRAMRFLREVDSASVMVNASTRFA--DGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp CSBHHHHHHHHHHCCSSEEEEEECGGGC--STTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred eCCHHHHHHHHHhCCcceEEEcCCCccC--CCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999999999986543 45899999999998 789999999999999998765
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-79 Score=658.99 Aligned_cols=391 Identities=19% Similarity=0.199 Sum_probs=341.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhhhh-------hHHHhHHH
Q 007627 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE 153 (595)
Q Consensus 85 ~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~ 153 (595)
-+++++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+. .++.. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999986 56532 58999999
Q ss_pred HHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 007627 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (595)
Q Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~ 233 (595)
.++++++..++ .. +..+......+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++.+
T Consensus 93 ~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 93 ACETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 99999877654 21 1111000001234688999999999999886 47899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEeeeC-Ch-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcC
Q 007627 234 YFRIIQAALAAVGAPENLVDVITG-FA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (595)
Q Consensus 234 l~~~~~~~l~~aGlp~g~v~vv~g-~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~ 309 (595)
+++++.++|.++|+|+|++|+|+| +. +.++.|.. ++|+|+||||+.+|+.|+++| +||+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999999999999999999999998 44 45777775 899999999999999999988 599999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHH
Q 007627 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389 (595)
Q Consensus 310 daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~ 389 (595)
|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 246 dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------
T ss_pred CCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------
Confidence 99999999999999999999 99999999999999999999999999987642
Q ss_pred HHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCc
Q 007627 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469 (595)
Q Consensus 390 a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d 469 (595)
+.||.+ ..+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 298 --------~~gg~~------~~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 358 (427)
T 1o20_A 298 --------VRGCEK------TRE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 358 (427)
T ss_dssp --------EEECHH------HHH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSC
T ss_pred --------eecChh------hhh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCC
Confidence 223331 012 34 896 34678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC----CCCcHHHHhccceeeEEEEcc
Q 007627 470 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 470 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~G~~gl~~~t~~k~v~~~~ 531 (595)
.++++++++++++|+|+||+.... .+.+||||.|.||+| +++|++|+++||+.|+|+...
T Consensus 359 ~~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 359 YSNAKKFVSEIDAAAVYVNASTRF--TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHHhCCccEEEECCCCcc--CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 999999999999999999987553 345899999999997 478999999999999998754
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-76 Score=642.47 Aligned_cols=415 Identities=18% Similarity=0.217 Sum_probs=344.9
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHH-HHH
Q 007627 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWL 158 (595)
Q Consensus 80 v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l-~~~ 158 (595)
++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+|+++|++++++|+||+..|+...|+..+++.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4568999999999999999999999999999999999999999999999999999999999998665777667666 333
Q ss_pred HHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 007627 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (595)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~ 238 (595)
.. .+... ..+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+||||.+|+++..+++++
T Consensus 81 ~~--~~~~g--~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 81 KD--EQTCG--ILEE---DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp TT--CCCSE--EC----------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hh--ccccc--cccC---CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 22 11100 0111 12345788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHH
Q 007627 239 QAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315 (595)
Q Consensus 239 ~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~ 315 (595)
.+++.++|+|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+ +++|++++||+++|+|||||+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 999999999999999999954 88999998 8999999999985 4567789999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCC
Q 007627 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395 (595)
Q Consensus 316 aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga 395 (595)
|++.+++|+|+|+||.|++++|||||+++||+|+++|+++ +||+++++++++++++++++...|+
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999999999999874 3899999999999999987766788
Q ss_pred eEeecCCCCCCCCCCCCcccCCee-------eecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCC----CCceeE
Q 007627 396 EILARGSFGHLSEGAVDQYFPPTV-------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR----YGLGCA 464 (595)
Q Consensus 396 ~vl~gG~~~~~~~~~~g~~~~PTv-------l~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~----~gL~as 464 (595)
++ +||..... ....|+|++||+ +.+++++|++++ |+||||++|++|+|+||||+++|++. |||++|
T Consensus 295 ~v-~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~ 371 (452)
T 3my7_A 295 KI-VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSG 371 (452)
T ss_dssp GG-TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEE
T ss_pred eE-ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEE
Confidence 86 46652100 012589999998 778999999886 89999999999999999999999985 999999
Q ss_pred EecCcHHHHHH---HHHHhccCCeeecCCCcccccCCCCCCCcCCC-----------CCCCCCcH-----HHHhccceee
Q 007627 465 VFSGSQHRARE---IAAQIQCGVAAINDFASNYMCQSLPFGGVKDS-----------GFGRFAGV-----EGLRACCLVK 525 (595)
Q Consensus 465 Vft~d~~~~~~---~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~S-----------G~G~~~G~-----~gl~~~t~~k 525 (595)
|||+|.+++++ +++++++|+|+||++ .||||+|.. |.|.++|. -+.+++.+.|
T Consensus 372 i~t~d~~~a~~i~~~a~~l~~G~V~VN~~--------~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~ 443 (452)
T 3my7_A 372 LYTNQDVNADRIRYFGDKMKTARILINIP--------TTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKK 443 (452)
T ss_dssp EESCTTTCHHHHHHHHHHCCCSEEEESCC--------CC----------------------------CCCCCGGGGEEEE
T ss_pred EEcCCHHHHHHHHHHHHhCCEEEEEECCC--------CCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeee
Confidence 99999877777 999999999999984 356655531 44544443 4667777888
Q ss_pred EEEEcc
Q 007627 526 SVVEDR 531 (595)
Q Consensus 526 ~v~~~~ 531 (595)
+|.+.+
T Consensus 444 ~v~~~~ 449 (452)
T 3my7_A 444 TVAKRA 449 (452)
T ss_dssp EEECCC
T ss_pred EEEeec
Confidence 876543
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=93.45 E-value=8.5 Score=40.11 Aligned_cols=258 Identities=17% Similarity=0.191 Sum_probs=139.0
Q ss_pred cccceEEEecceEEEEEcCcc---hhhHhhHHHHHHHHhcCCEEE--EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEE
Q 007627 179 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGIV--IKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~N---~P~~~~~~~l~~ALaaGN~VV--lKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~ 253 (595)
+.....++.|+--|++-+|.- ||-. .+...+||-.||..=| .-|.+..-.....++ +.+.+|..+
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e---- 189 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR---- 189 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE----
T ss_pred CCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE----
Confidence 445567889999999999954 6644 5556789999998633 334322111111111 123467754
Q ss_pred eee-CChhHHHHHHh------CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEE-cCCCCHHHHHHHHHHHHH
Q 007627 254 VIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV-CDDVDVPHVAQIAVRAAL 325 (595)
Q Consensus 254 vv~-g~~~~~~~L~~------~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV-~~daDl~~aa~~i~~~~f 325 (595)
+.. |+...-.+|.- .+|+|+=-|..=|..+ +.....-.-+=+.-|-..-+|| ++++|.+..|..++.-+=
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAE 267 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVFGQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAE 267 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHBTTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHT
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhcCCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhc
Confidence 222 43444444432 8999998888765432 1111111112222233333344 334999998888776543
Q ss_pred HcCCCCCCCCceEEEccc--hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCC
Q 007627 326 QSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403 (595)
Q Consensus 326 ~n~GQ~C~a~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~ 403 (595)
+.. .+ +-++|..+ ..++..+.+.+.++.+. . .+..++-++. .|
T Consensus 268 Hd~----~a-~~iLvT~s~~la~~V~~~i~~~l~~l~---------------r---~~i~~~sl~~---~g--------- 312 (423)
T 4gic_A 268 HDE----DA-QAILISPDAAHLEAVQASIERLLPGME---------------R---AEVIRTSLER---RG--------- 312 (423)
T ss_dssp TCT----TC-EEEEEESCHHHHHHHHHHHHHHGGGCT---------------T---HHHHHHHHHH---HC---------
T ss_pred cCC----CC-eEEEEeCcHHHHHHHHHHHHHHHhhCc---------------c---HHHHHHHHhc---Cc---------
Confidence 322 22 34555443 34444444444444331 0 1111211111 11
Q ss_pred CCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 007627 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 482 (595)
Q Consensus 404 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~-~ 482 (595)
.++.++|++||++++|..- +=-.-|.++|. +.+..+++ +
T Consensus 313 ------------------------------------~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~---~~~l~~i~nA 352 (423)
T 4gic_A 313 ------------------------------------GMILVDDLEQAAAVANRIA-PEHLELSVESP---EVLVESIRNA 352 (423)
T ss_dssp ------------------------------------EEEECSSHHHHHHHHHHHC-CSEEEEESSCH---HHHGGGCCCC
T ss_pred ------------------------------------eEEEEeehHHHHHHHHhhC-hHHhhhhhCCH---HHHHhhCcEe
Confidence 2445689999999999832 22456777775 45677776 9
Q ss_pred CCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 483 GVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 483 G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|.|++..+..- ..++.||- +|..|+.+.-+.+.|...-++.
T Consensus 353 GaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 353 GAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp SEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEEEE
T ss_pred ceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeEE
Confidence 99999764211 11334554 5677787777888887665543
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=86.52 E-value=34 Score=35.72 Aligned_cols=254 Identities=17% Similarity=0.155 Sum_probs=142.4
Q ss_pred cccceEEEecceEEEEEcCc---chhhHhhHHHHHHHHhcCCEEEEecCC--CchhHHHHHHHHHHHHHHhcCCCCCcEE
Q 007627 179 HKKAKVEFHPLGVVGAIVSW---NYPFHNIFNPMLAAVFSGNGIVIKVSE--NASWSGCFYFRIIQAALAAVGAPENLVD 253 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~---N~P~~~~~~~l~~ALaaGN~VVlKps~--~~p~s~~~l~~~~~~~l~~aGlp~g~v~ 253 (595)
|.....++.|+--|++-+|. -||- ..+...+||-.||..=|+-.+| ..|.+ ++ +.+.+|.++ +-
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~-----AA~l~Gv~e--Iy 182 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---LY-----AAQLCGVQD--VF 182 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---HH-----HHHHTTCCE--EE
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHH---HH-----HHHHcCCCE--Ee
Confidence 34455678999999999996 4664 4555678999999865544443 33322 11 123477754 22
Q ss_pred eeeCChhHHHHHHh------CCCEEEEeCChhHH--HHHHHHhhcCCCcEeecC-CCcceEEE--cCCCCHHHHHHHHHH
Q 007627 254 VITGFAETGEALVS------SVDKIIFVGSPGVG--RMIMRNASKTLTPVTLEL-GGKDAFIV--CDDVDVPHVAQIAVR 322 (595)
Q Consensus 254 vv~g~~~~~~~L~~------~vd~I~ftGS~~~g--~~v~~~aa~~l~pv~lEl-GGk~p~IV--~~daDl~~aa~~i~~ 322 (595)
-+ |+...-.+|.- .+|+|+=.|..=|. |.....- .. .|-..+ -|-+=+.| +++||-+..|..++.
T Consensus 183 ~v-GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~--~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLs 258 (434)
T 1kae_A 183 NV-GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR--LD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLS 258 (434)
T ss_dssp EC-CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHC--TT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHH
T ss_pred ec-ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhh--cC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 12 43444444432 89999888876543 2222110 11 122221 33443333 345899988887765
Q ss_pred HHHHcCCCCCCCCceEEEccc--hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeec
Q 007627 323 AALQSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (595)
Q Consensus 323 ~~f~n~GQ~C~a~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~g 400 (595)
-+=+.. .+ +-++|..+ ..++..+.+.+.++.+. + . +.++.+.
T Consensus 259 QAEHd~----~a-~aiLvT~s~~la~~V~~ev~~ql~~lp----------------r--~----~ia~~sl--------- 302 (434)
T 1kae_A 259 QAEHGP----DS-QVILLTPAADMARRVAEAVERQLAELP----------------R--A----ETARQAL--------- 302 (434)
T ss_dssp HHTTCT----TC-EEEEEESCHHHHHHHHHHHHHHHTTCT----------------T--H----HHHHHHH---------
T ss_pred HhccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHH---------
Confidence 543322 22 34455443 33444444444333321 0 0 1122221
Q ss_pred CCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh
Q 007627 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (595)
Q Consensus 401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l 480 (595)
..- .|+-++|++||++++|..- +=-.-|.++|. +.++.++
T Consensus 303 -----------------------------------~~~-~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp---~~~l~~I 342 (434)
T 1kae_A 303 -----------------------------------NAS-RLIVTKDLAQCVEISNQYG-PEHLIIQTRNA---RELVDSI 342 (434)
T ss_dssp -----------------------------------TTC-EEEECSSHHHHHHHHHHHC-CSEEEEESTTH---HHHGGGC
T ss_pred -----------------------------------HcC-eEEEECCHHHHHHHHHHhh-hHhhhhhhcCH---HHHHhhc
Confidence 111 3556789999999999832 12467778876 4566777
Q ss_pred c-cCCeeecCCCc-------ccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 481 Q-CGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 481 ~-~G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+ +|.|++..+.. ...++.||- +|+.|+.+.-+.+.|...-++.
T Consensus 343 ~nAGaIFlG~~tpe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 343 TSAGSVFLGDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp CSCSEEEESTTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEEE
T ss_pred CcccchhcCCCCchhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeEE
Confidence 5 89999997522 123455665 4677787777888887665543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 595 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-108 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-108 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-107 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 2e-95 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 9e-90 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-83 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 2e-78 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 3e-72 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-39 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 8e-35 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 5e-23 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 333 bits (854), Expect = e-108
Identities = 136/485 (28%), Positives = 221/485 (45%), Gaps = 21/485 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSF 107
I+I + S K + PAT + L + +VD+ V AR+A ++ W
Sbjct: 16 IFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDA 75
Query: 108 KQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167
+R + L L I + L+ + + + GK +A L ++ + + + +K
Sbjct: 76 SERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQG 135
Query: 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
G + P+GV G I+ WN+P + A+ GN +V+K +E
Sbjct: 136 RTIPMDGNFFTY----TRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQT 191
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMI 284
+ +I+ A G P +V+++ G+ G A+ S VDK+ F GS VG++I
Sbjct: 192 PLTALHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 247
Query: 285 MRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
A K L V+LELGGK IV D D+ + + A + GQ C A R +V
Sbjct: 248 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEES 307
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
IY FV + + K G PL G E EK+ +L+ +GA++ G
Sbjct: 308 IYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG- 366
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463
++G + PTV +V M++ +EE FGP+ IMKF + ++V+K AN++ YGL
Sbjct: 367 PWGNKGY---FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSA 423
Query: 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523
+F+ +A +++ +Q G +N + + + PFGG K SG GR G G
Sbjct: 424 GIFTNDIDKAITVSSALQSGTVWVNCY--SVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 481
Query: 524 VKSVV 528
VK+V
Sbjct: 482 VKTVT 486
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 333 bits (854), Expect = e-108
Identities = 138/464 (29%), Positives = 218/464 (46%), Gaps = 15/464 (3%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+EPAT + L EVD+ V A+ A W+K + +R + + + I E ++ I
Sbjct: 41 FEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNI 100
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
++ + GKT+ E + + + A P
Sbjct: 101 AKLEVINNGKTI-----TEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREP 155
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
LGV I++WNYPF A+ GN +V K S +G I A G P
Sbjct: 156 LGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEA----GVP 211
Query: 249 ENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
LV+V+ G AETG L V K+ F GS G+ +M ++KT+ VTLELGGK +
Sbjct: 212 VGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLL 271
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
+ D ++ + + A+ A + GQ C R +V R+I F+ +V K K++ G PL
Sbjct: 272 IFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331
Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVN 424
+ MG L +K+ V A +GA +L G S+ + + P V+ N
Sbjct: 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391
Query: 425 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 484
M ++EE FGP+M ++ F+T+EEV++ AN++ +GL VF+ RA +AA ++ G
Sbjct: 392 DDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451
Query: 485 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528
IN ++ + + +PFGG K SGFGR G + +K+V+
Sbjct: 452 CYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 330 bits (846), Expect = e-107
Identities = 143/485 (29%), Positives = 218/485 (44%), Gaps = 21/485 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSF 107
I+I S P+T + + + +VD+ V AR A ++ W +
Sbjct: 16 IFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDA 75
Query: 108 KQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167
R + L L I + + + + D GK V + L ++ + + + +K+
Sbjct: 76 SHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHG 135
Query: 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
G + P+GV G I+ WN+P + A+ +GN +V+KV+E
Sbjct: 136 KTIPIDGDFFSY----TRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 191
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMI 284
+ + +I+ A G P +V+++ GF G A+ S VDK+ F GS +GR+I
Sbjct: 192 PLTALYVANLIKEA----GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVI 247
Query: 285 MRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
A S L VTLELGGK I+ D D+ + A A + GQ R +V D
Sbjct: 248 QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQED 307
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
IY FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 308 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 367
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 463
G + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL
Sbjct: 368 -AADRGY---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 423
Query: 464 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523
AVF+ +A ++ +Q G +N + + PFGG K SG GR G GL+A
Sbjct: 424 AVFTKDLDKANYLSQALQAGTVWVNCY--DVFGAQSPFGGYKMSGSGRELGEYGLQAYTE 481
Query: 524 VKSVV 528
VK+V
Sbjct: 482 VKTVT 486
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 298 bits (763), Expect = 2e-95
Identities = 126/481 (26%), Positives = 214/481 (44%), Gaps = 17/481 (3%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+ I + + E Y PAT L S +VD V A A W +++ K R
Sbjct: 5 LLINGELVSGEGEK-QPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 63
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
+ L L I E+ ++ E+ SR+ GK + A EI + +
Sbjct: 64 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRF---FAGAARCLNG 120
Query: 171 RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 230
++G + + + PLGVV +I WNYP + A+ +GN +V+K SE +
Sbjct: 121 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 180
Query: 231 GCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRN 287
+ + P +V+++ G G+ L V + GS G I+ +
Sbjct: 181 ALKLAELAKDIF-----PAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISH 235
Query: 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 347
+ ++ +ELGGK IV DD D+ V + ++GQ+C A R Y + IY
Sbjct: 236 TASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 295
Query: 348 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 407
V ++ V ++ +G P ++G L L H E++ V +A G + G
Sbjct: 296 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 355
Query: 408 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 467
G Y+ PT++ ++Q+E FGP++ + F+ +E+VV ANDS+YGL +V++
Sbjct: 356 NGY---YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWT 412
Query: 468 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527
RA ++A++Q G +N + +P GG K SG+G+ + GL +V+ V
Sbjct: 413 KDVGRAHRVSARLQYGCTWVNTH--FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 470
Query: 528 V 528
+
Sbjct: 471 M 471
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 282 bits (722), Expect = 9e-90
Identities = 124/460 (26%), Positives = 198/460 (43%), Gaps = 19/460 (4%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
+ + V +AR+A S + R Q L L + I E+ + I + D GK + E
Sbjct: 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61
Query: 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207
+ E++ + E W + E + R + PLGVV I +WNYPF+
Sbjct: 62 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 121
Query: 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS 267
PM+ AV +GN +++K SE + +I + V G ET E L
Sbjct: 122 PMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ----YMDQNLYLVVKGGVPETTELLKE 177
Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
D I++ GS VG+++M A+K LTPVTLELGGK V D D+ + +
Sbjct: 178 RFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMN 237
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
SGQ C + I V ++ K +K G D G + H ++++ L+
Sbjct: 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLI 296
Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447
++ + S Y PT++V+V+ +MQEE FGP+MPI+ +
Sbjct: 297 DNQKVAHGGTWDQSSR----------YIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSL 346
Query: 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDS 507
EE ++ N L VFS ++ +++ A+ G ND + +LPFGGV +S
Sbjct: 347 EEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNS 406
Query: 508 GFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYP 547
G G + G + +S + + +YP
Sbjct: 407 GMGAYHGKKSFETFSHRRSCLVKSLLN----EEAHKARYP 442
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 267 bits (682), Expect = 2e-83
Identities = 140/478 (29%), Positives = 212/478 (44%), Gaps = 19/478 (3%)
Query: 57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRI 116
G SE +++ YEPA+ LG PA+S EVD A A+KAQ W S+ +R +L
Sbjct: 10 GEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHK 69
Query: 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT-CEKITWLLSEGEKWLKPEYRSSGR 175
+ ++ +E I I S++ K A + T + E S
Sbjct: 70 VADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEA 129
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ K A V P+G+V AI +NYP + + + A+ +GN I K S SG
Sbjct: 130 ASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLA 189
Query: 236 RIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTL 292
A G P + + ITG +E G+ +V V+ I F GS G+G I + A +
Sbjct: 190 EAFAEA----GLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--M 243
Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
P+ LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V ++
Sbjct: 244 RPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKI 303
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
+ V +++ G P K + V ++ + A EG
Sbjct: 304 REKVLALTIGNPEDDADITP-----LIDTKSADYVEGLINDANDKGATALTEIKREGN-- 356
Query: 413 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 472
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+ R
Sbjct: 357 -LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPR 415
Query: 473 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 530
A IA Q++ G IN+ + PF G K SG G + A VKSVV D
Sbjct: 416 AFGIAEQLEVGTVHINNKTQ-RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 255 bits (651), Expect = 2e-78
Identities = 115/473 (24%), Positives = 186/473 (39%), Gaps = 26/473 (5%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
A + +G +AE + + A KA K W + R + L + + +
Sbjct: 59 SAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEA 118
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL- 189
+ GK V+ E I ++ L+ Y + + F+
Sbjct: 119 TLVYEVGKNWVE----ASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPL 174
Query: 190 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249
G I WN+P ++ V GN ++ K +E+A G F I A G P
Sbjct: 175 GAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA----GFPP 230
Query: 250 NLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA------SKTLTPVTLELG 300
+V+ + G E G LV + I F GS VG I A +E G
Sbjct: 231 GVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETG 290
Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
GK+A IV + D A+ V +A GQ C+ A R + + Y + +V K + +S
Sbjct: 291 GKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
GP D+G + E K+ + + ++G +L EG + PTV
Sbjct: 351 VGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLE--GEGY---FIAPTVF 404
Query: 421 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480
V ++ QEE FGP++ +++ E +++AND+ YGL V+S + +
Sbjct: 405 TEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREF 464
Query: 481 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVEDRW 532
G N + + PFGG K SG G ++ LR +K+V E R+
Sbjct: 465 HVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE-RF 516
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 238 bits (607), Expect = 3e-72
Identities = 111/486 (22%), Positives = 186/486 (38%), Gaps = 17/486 (3%)
Query: 57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLR 115
G S +++ P + + + SR EV+ + K + +R LR
Sbjct: 23 GEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLR 82
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
I + ++ E+ + GK A L +
Sbjct: 83 KAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTY 142
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ + V PLGVV AI +NYP + N + + GN +V+K S +
Sbjct: 143 DTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV 202
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
+ + A G P + + ++ + E +V+ V + F GS VG +++ +
Sbjct: 203 KALLDA----GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VK 256
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
+ELGG D IV +D D+ A R +GQ C + R +Y V +VA
Sbjct: 257 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 316
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
K + S+ G P D+G L +++ + DA++KG +LA G + Q
Sbjct: 317 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYV---Q 373
Query: 414 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 473
+ M L + E F P+ ++ ++ ++LAN YGL AVF +
Sbjct: 374 PTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKI 433
Query: 474 REIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED--- 530
R ++ G IND + + PFGG K SG R + A K++V +
Sbjct: 434 RRAVRLLEVGAIYINDMPRHGIGY-YPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKG 492
Query: 531 -RWWPY 535
W Y
Sbjct: 493 KGVWKY 498
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 147 bits (371), Expect = 2e-39
Identities = 67/453 (14%), Positives = 144/453 (31%), Gaps = 59/453 (13%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT----MVD 142
E+ E+ + R+A V ++ +++ + ++ + + + E ++ I E + D K + +
Sbjct: 2 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 61
Query: 143 ASLGEIMTTCEKITWLLSEGEKWL---KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 199
+ + + ++I ++ E + P + ++ + + + +
Sbjct: 62 SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYE 121
Query: 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 259
+ + A+ SGN I+++ +A S I+ AL PE+ V+ I
Sbjct: 122 SRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD 181
Query: 260 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
+ + + + + + P G ++ T LE G + I D+ A
Sbjct: 182 RSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVP 241
Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379
+ A C AE+ VH I F+ + + ++
Sbjct: 242 VIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVR--------------- 286
Query: 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439
+ V V T E I+
Sbjct: 287 -------------------------------GCEKTREIVPDVVPATEDDWPTEYLDLII 315
Query: 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 499
I +E ++ G ++ + + A++ ++I +N AS
Sbjct: 316 AIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVN--ASTRFTDGG 373
Query: 500 PFGGVKDSGFGRF----AGVEGLRACCLVKSVV 528
FG + G G GLR K VV
Sbjct: 374 QFGFGAEIGISTQRFHARGPVGLRELTTYKFVV 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 136 bits (341), Expect = 8e-35
Identities = 55/473 (11%), Positives = 117/473 (24%), Gaps = 21/473 (4%)
Query: 62 SETKVQCYEPATMKYLGY-FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
++ T + L FP + EV++ A K + + + + +R LR +
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASE 60
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGR 175
+ + I + +T V + GEI T ++ + + +
Sbjct: 61 LEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRA 119
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ + + LG V + N+P A G + V + + G
Sbjct: 120 PLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQI 179
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPV 295
A + V G + A L
Sbjct: 180 VAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 239
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
E + + + + +A L +F +
Sbjct: 240 RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPET 299
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
+ L + L + Q+ V +
Sbjct: 300 QAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAES----PCVASA 355
Query: 416 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HRA 473
+EE FGP I+ +++ L+ L + + + +
Sbjct: 356 LFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQV 415
Query: 474 REIAAQIQ--CGVAAINDF-----ASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519
++ +++ G N + M P+ S G E +
Sbjct: 416 SQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV-GAEAIH 467
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 99.5 bits (247), Expect = 5e-23
Identities = 52/429 (12%), Positives = 122/429 (28%), Gaps = 47/429 (10%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD----TGKTMV 141
+ + ARKA + S + R L + + + I E + D +
Sbjct: 3 SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA 62
Query: 142 DASLGEI-MTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
D+ L + + +K +L + + P + + + V +V
Sbjct: 63 DSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI 122
Query: 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG----CFYFRIIQAALAAVGAPENLVD 253
+ I N ++ SGN ++K + + + I + G P V
Sbjct: 123 FESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQ 182
Query: 254 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 313
+I + + L + V + + PV G + + +D D+
Sbjct: 183 LIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK-IPVLGHADGICSIYLDEDADL 241
Query: 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373
+I++ A E ++ + + +
Sbjct: 242 IKAKRISLDAKTNYPAGCN-AMETLLINPKFSKWW---------------EVLENLTLEG 285
Query: 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
+ ++ L+ D L++ ++ + TV + + +E
Sbjct: 286 GVTIHATKDLKTAYFDKLNELGKL-------------TEAIQCKTVDAD---EEQDFDKE 329
Query: 434 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 493
+ + E ++ N A+ + ++ A + + N AS
Sbjct: 330 FLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWN--AST 387
Query: 494 YMCQSLPFG 502
+G
Sbjct: 388 RFADGFRYG 396
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 96.68 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.1e-103 Score=865.65 Aligned_cols=470 Identities=29% Similarity=0.456 Sum_probs=440.0
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH 124 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~---~W~~~~~~~R~~~L~~l~~~l~~~ 124 (595)
-.++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+ .|+++|.++|.++|++++++|++|
T Consensus 13 ~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~ 92 (494)
T d1bxsa_ 13 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 92 (494)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhC
Confidence 35899999999998899999999999999999999999999999999999995 799999999999999999999999
Q ss_pred HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHh
Q 007627 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (595)
Q Consensus 125 ~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~ 204 (595)
+++|++++++|+||+..|+...|+...++.++++++..+++.. +..+.. .+...++.++|+|||++|+|||||+.+
T Consensus 93 ~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~ 168 (494)
T d1bxsa_ 93 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQG-RTIPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCE-EEECCS---SSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcc-eeecCC---CCceeEEEEccEEEEEEEeCccchhHH
Confidence 9999999999999999998677899999999999988776432 222221 245678999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHH
Q 007627 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (595)
Q Consensus 205 ~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g 281 (595)
+++++++||++||+||+||||.+|+++.++.+++. ++|+|+|++|+|+|++ +.++.|++ +||+|+||||+.+|
T Consensus 169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g 244 (494)
T d1bxsa_ 169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIK----EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 244 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHH----HhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHH
Confidence 99999999999999999999999999999888766 5799999999999976 67899988 89999999999999
Q ss_pred HHHHHHhhc-CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhcc
Q 007627 282 RMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (595)
Q Consensus 282 ~~v~~~aa~-~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (595)
+.|++.|++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 245 ~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~ 324 (494)
T d1bxsa_ 245 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV 324 (494)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhhee
Confidence 999999885 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCcee
Q 007627 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 361 ~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
+|+|.++++++|||++++++++++++|++|+++||++++||... ...|+|++|||+.+++++|++++||+||||++
T Consensus 325 ~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~ 400 (494)
T d1bxsa_ 325 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQ 400 (494)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred eeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCcc----CCCceeEcCEEEeCCCCCcHHHhccccCceEE
Confidence 99999999999999999999999999999999999999999743 35799999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhc
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~ 520 (595)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+. ..+||||+|.||+|++||.+||++
T Consensus 401 v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~PfGG~~~SG~G~~~g~~~~~~ 478 (494)
T d1bxsa_ 401 IMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVS--AQCPFGGFKMSGNGRELGEYGFHE 478 (494)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCC--TTSCBCCSGGGEESCBSHHHHHHT
T ss_pred EEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcC--CCCCcCccccccCChhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999976543 458999999999999999999999
Q ss_pred cceeeEEEEcc
Q 007627 521 CCLVKSVVEDR 531 (595)
Q Consensus 521 ~t~~k~v~~~~ 531 (595)
||+.|+|+.+.
T Consensus 479 ft~~k~i~~~~ 489 (494)
T d1bxsa_ 479 YTEVKTVTIKI 489 (494)
T ss_dssp TEEEEEEEEEC
T ss_pred hcceEEEEEec
Confidence 99999998754
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=5e-103 Score=860.14 Aligned_cols=471 Identities=30% Similarity=0.443 Sum_probs=440.6
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHH
Q 007627 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYII 122 (595)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~---~W~~~~~~~R~~~L~~l~~~l~ 122 (595)
+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|+++++.|+
T Consensus 11 ~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~ 90 (494)
T d1o04a_ 11 VFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE 90 (494)
T ss_dssp CCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHH
Confidence 3446899999999998999999999999999999999999999999999999985 6999999999999999999999
Q ss_pred HhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhh
Q 007627 123 EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 202 (595)
Q Consensus 123 ~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~ 202 (595)
+|+++|++++++|+||+..++...|+..+++.++|+++..++... +..+.. .+...+++++|+|||++|+|||||+
T Consensus 91 ~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~ 166 (494)
T d1o04a_ 91 RDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHG-KTIPID---GDFFSYTRHEPVGVCGQIIPWNFPL 166 (494)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCE-EEECCS---SSEEEEEEEEECCEEEEECCSSSHH
T ss_pred HhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcC-ceeccC---CCceeEEEEecccEEEEECCcccHH
Confidence 999999999999999999998778999999999999998876543 222221 2456789999999999999999999
Q ss_pred HhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChh
Q 007627 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG 279 (595)
Q Consensus 203 ~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~ 279 (595)
.++++++++||++||+||+|||+.+|.++.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||++
T Consensus 167 ~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~----~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~ 242 (494)
T d1o04a_ 167 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIK----EAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTE 242 (494)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHH----HhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHH
Confidence 9999999999999999999999999999998888765 5799999999999976 67899998 899999999999
Q ss_pred HHHHHHHHhh-cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh
Q 007627 280 VGRMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (595)
Q Consensus 280 ~g~~v~~~aa-~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~ 358 (595)
+|+.|+++|+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++.|.+++++
T Consensus 243 ~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~ 322 (494)
T d1o04a_ 243 IGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKS 322 (494)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhh
Confidence 9999998875 789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCc
Q 007627 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (595)
Q Consensus 359 l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPV 438 (595)
+++|+|.++++++||||++.++++++++|++|+++|+++++||... .+.|+|++|||+.+++++|++++||+||||
T Consensus 323 ~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPv 398 (494)
T d1o04a_ 323 RVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPV 398 (494)
T ss_dssp CCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSE
T ss_pred eeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCceEcCEEEeCCCCCCHHHhccccCce
Confidence 9999999999999999999999999999999999999999999742 357899999999999999999999999999
Q ss_pred eeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHH
Q 007627 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518 (595)
Q Consensus 439 l~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl 518 (595)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+. ..+||||+|.||+|++||.+||
T Consensus 399 l~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~PfGG~~~SG~G~~~g~~~~ 476 (494)
T d1o04a_ 399 MQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFG--AQSPFGGYKMSGSGRELGEYGL 476 (494)
T ss_dssp EEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCC--TTSCBCCSGGGEESCBSTGGGG
T ss_pred EEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCC--CCCCcCCcccccCCchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999976643 3589999999999999999999
Q ss_pred hccceeeEEEEc
Q 007627 519 RACCLVKSVVED 530 (595)
Q Consensus 519 ~~~t~~k~v~~~ 530 (595)
++||+.|+|+++
T Consensus 477 ~~ft~~k~v~~~ 488 (494)
T d1o04a_ 477 QAYTEVKTVTVK 488 (494)
T ss_dssp GGGEEEEEEEEE
T ss_pred HHhcCeEEEEEe
Confidence 999999999874
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=4.5e-102 Score=853.51 Aligned_cols=479 Identities=29% Similarity=0.451 Sum_probs=445.4
Q ss_pred CCCCCCcccccCCcccCCCCCCeE-EeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 007627 43 NQTPDNSFIYIPPRGRTPQSETKV-QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121 (595)
Q Consensus 43 ~~~~~~~~~~i~g~~~~~~~~~~~-~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l 121 (595)
.-......+||+|+|+.+.++.++ +++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|
T Consensus 14 ~~~~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L 93 (503)
T d1a4sa_ 14 SVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARII 93 (503)
T ss_dssp TCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred ceeecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 334444567999999998777665 6899999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchh
Q 007627 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201 (595)
Q Consensus 122 ~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P 201 (595)
++|+++|++++++|+||+..++. .|+..+++.+++++...++...... .. ..+..+++.++|+|||++|+|||||
T Consensus 94 ~~~~eela~~~~~etGkp~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~p~NfP 168 (503)
T d1a4sa_ 94 RERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHI-QL---PGGAFAYTRREPLGVCAGILAWNYP 168 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEE-EC---GGGCEEEEEEEECSEEEEECCSSSH
T ss_pred HHhHHHHHHHHHHhhhhcchhhh-hhhhhhhhccccccccccccccccc-cc---CCCcccccccccceeeecccCCCCh
Confidence 99999999999999999999984 6999999999999988876543322 11 1345688999999999999999999
Q ss_pred hHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChh
Q 007627 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPG 279 (595)
Q Consensus 202 ~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~ 279 (595)
+.++++++++||++||+||+|||+.+|+++.+++++++ ++|+|+|++|+|+|+.++++.|++ +||+|+||||+.
T Consensus 169 ~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~ 244 (503)
T d1a4sa_ 169 FMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFH----EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVP 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHH
Confidence 99999999999999999999999999999999888765 589999999999998899999998 899999999999
Q ss_pred HHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhc
Q 007627 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (595)
Q Consensus 280 ~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l 359 (595)
+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++++.+.++++
T Consensus 245 ~G~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~ 324 (503)
T d1a4sa_ 245 TGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAI 324 (503)
T ss_dssp HHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC--CCCCCCcccCCeeeecCCCCCcccccccccC
Q 007627 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (595)
Q Consensus 360 ~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~--~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGP 437 (595)
++|++.++.+++||++++.+++++++++++|+++||++++||..... +....|+|++|||+.+++++|++++||+|||
T Consensus 325 ~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgP 404 (503)
T d1a4sa_ 325 VVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGP 404 (503)
T ss_dssp CBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred eeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCc
Confidence 99999999999999999999999999999999999999999985432 2235799999999999999999999999999
Q ss_pred ceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHH
Q 007627 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG 517 (595)
Q Consensus 438 Vl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~g 517 (595)
|++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. ..+||||+|.||+|++||.+|
T Consensus 405 vl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~PfGG~k~SG~G~~~g~~~ 482 (503)
T d1a4sa_ 405 VMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISP--VEVPFGGYKMSGFGRENGQAT 482 (503)
T ss_dssp EEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCC--TTSCBCCSGGGEECCBSTTGG
T ss_pred eEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCC--CCCCccCcccCcCCcchHHHH
Confidence 999999999999999999999999999999999999999999999999999976654 359999999999999999999
Q ss_pred HhccceeeEEEEccc
Q 007627 518 LRACCLVKSVVEDRW 532 (595)
Q Consensus 518 l~~~t~~k~v~~~~~ 532 (595)
|++||+.|+|+++..
T Consensus 483 l~~~t~~k~v~~~~~ 497 (503)
T d1a4sa_ 483 VDYYSQLKTVIVEMG 497 (503)
T ss_dssp GGGSEEEEEEEECCS
T ss_pred HHHhhCeEEEEEcCC
Confidence 999999999988653
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.4e-100 Score=833.33 Aligned_cols=468 Identities=27% Similarity=0.427 Sum_probs=427.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||||+|+.+ ++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|
T Consensus 3 ~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el 81 (474)
T d1wnda_ 3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVF 81 (474)
T ss_dssp CCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHH
Confidence 579999999977 5678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++...++.......+++.......... ..+....+...+++++|+|||++|+|||||+.+++++
T Consensus 82 a~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 158 (474)
T d1wnda_ 82 AELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL---AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 158 (474)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEE---CBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCChhHhhhccccccccccccccccccccccc---ccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence 9999999999999986556666666666655544332111 1111223467889999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++.+++++++ .++|+|++|+|+|++ +.++.|++ +||+|+||||+.+|+.|+
T Consensus 159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~-----~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~ 233 (474)
T d1wnda_ 159 LAPALAAGNCVVLKPSEITPLTALKLAELAK-----DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 233 (474)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHT-----TTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHH-----HhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHH
Confidence 9999999999999999999999999888764 359999999999976 67999998 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|++.
T Consensus 234 ~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~ 313 (474)
T d1wnda_ 234 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPD 313 (474)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTT
T ss_pred HhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++||+++..+.+++.+++++++++|+..+.+|... ....|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 314 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~---~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~ 390 (474)
T d1wnda_ 314 DESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK---RKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 390 (474)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB---CSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcc---cCCCceEEeeeEeecccccccceeecccCCeEEEEEeC
Confidence 999999999999999999999999999999654444322 23578999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++||+.|
T Consensus 391 ~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k 468 (474)
T d1wnda_ 391 NEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVR 468 (474)
T ss_dssp CHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEE
T ss_pred CHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCc--cCCCCcccccccccCccCHHHHHHHcCCEE
Confidence 999999999999999999999999999999999999999999997654 345999999999999999999999999999
Q ss_pred EEEEc
Q 007627 526 SVVED 530 (595)
Q Consensus 526 ~v~~~ 530 (595)
+|+++
T Consensus 469 ~v~i~ 473 (474)
T d1wnda_ 469 HVMVK 473 (474)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99864
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.3e-98 Score=829.27 Aligned_cols=467 Identities=24% Similarity=0.373 Sum_probs=430.4
Q ss_pred CcccccCCcccCCCCCCeEEeecCC-CCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
.+++||+|+|+.+ .+.++++||. ||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++|++
T Consensus 37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ 114 (516)
T d1uzba_ 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 4679999999975 4578899985 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++ ..|+..+++.++++++.+.+...+.....+ ..+...++.|+|+|||++|+|||||+.+++
T Consensus 115 ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~ 191 (516)
T d1uzba_ 115 ELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHhCCCcccc-chhHHHHHHHHHHHHHHHHhhhhccccccc--ccccceeEEeeccCcccccccccccccccc
Confidence 99999999999999998 579999999999999988776544322211 234567888999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.++.|++ +||+|.||||+.+|+.
T Consensus 192 ~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~ 267 (516)
T d1uzba_ 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFH----EAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH----HHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred ccccchhhhcccccccccchhHHHHHHHHHHHH----HhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHH
Confidence 999999999999999999999999988877765 5899999999999975 78999998 9999999999999999
Q ss_pred HHHHhh------cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHH
Q 007627 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (595)
Q Consensus 284 v~~~aa------~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~ 357 (595)
|++.|+ +++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|+|||++++|+|++++.++++
T Consensus 268 i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~ 347 (516)
T d1uzba_ 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAE 347 (516)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHH
Confidence 999987 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccC
Q 007627 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (595)
Q Consensus 358 ~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGP 437 (595)
++++| |.++++++|||++..++++++++|++|+++|+.++ ||... +..|+|++||||.+++++|++++||+|||
T Consensus 348 ~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~-~g~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGP 421 (516)
T d1uzba_ 348 RLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL-GGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGP 421 (516)
T ss_dssp TCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEE-CCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSS
T ss_pred hcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEEE-CCCcC----CCCCceECCEEEecCCCCchhhcCCCcCc
Confidence 99999 55778899999999999999999999999997664 55532 35799999999999999999999999999
Q ss_pred ceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCc-HH
Q 007627 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VE 516 (595)
Q Consensus 438 Vl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G-~~ 516 (595)
|++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.++...+.+||||+|.||+|+++| .+
T Consensus 422 vl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~ 501 (516)
T d1uzba_ 422 VLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALD 501 (516)
T ss_dssp EEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHH
T ss_pred eEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHH
Confidence 99999999999999999999999999999999999999999999999999998776656679999999999999876 79
Q ss_pred HHhccceeeEEEE
Q 007627 517 GLRACCLVKSVVE 529 (595)
Q Consensus 517 gl~~~t~~k~v~~ 529 (595)
||++||+.|+|+.
T Consensus 502 ~l~~~~~~k~v~~ 514 (516)
T d1uzba_ 502 YLRLFLEMKAVAE 514 (516)
T ss_dssp HHHTTEEEEEEEE
T ss_pred HHHHhCCeeeEEE
Confidence 9999999999985
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=6.1e-93 Score=781.47 Aligned_cols=470 Identities=24% Similarity=0.351 Sum_probs=428.6
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHh
Q 007627 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEH 124 (595)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~l~~~l~~~ 124 (595)
++.+++||||+|+. ++++++++||+||+.+++++.++.+|+++|+++|++|++ +|+++|..+|.++|+++++.|.+|
T Consensus 14 ~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~ 91 (499)
T d1ky8a_ 14 VPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERN 91 (499)
T ss_dssp EEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHh
Confidence 34478999999986 467899999999999999999999999999999988877 799999999999999999999999
Q ss_pred HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccC-CcccccccceEEEecceEEEEEcCcchhhH
Q 007627 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203 (595)
Q Consensus 125 ~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~ 203 (595)
+++|++++++|+|||..++ .+|+..+++.++|++..++++........ .........+++|+|+|||++|+|||||+.
T Consensus 92 ~~~la~~~~~etGk~~~~a-~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~ 170 (499)
T d1ky8a_ 92 LDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLF 170 (499)
T ss_dssp HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHhCCCHHHH-hhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccch
Confidence 9999999999999999998 57999999999999998887644322211 111234567899999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHH
Q 007627 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG 281 (595)
Q Consensus 204 ~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g 281 (595)
++++++++||++||+||+|||+.+|.++..+.+++. ++|+|+++++++.|.++.+..|++ .++.|.||||+.+|
T Consensus 171 ~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~----~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g 246 (499)
T d1ky8a_ 171 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL----DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVG 246 (499)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHH
T ss_pred hhhhcchhhhcccccccccccccchhhhhhhccccc----cccccceeeecccCChHHHHHHhhccceeEEEeecccccc
Confidence 999999999999999999999999999988877765 579999999999998888888887 99999999999999
Q ss_pred HHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 282 ~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
+.+++.++ .+|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 247 ~~i~~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~ 324 (499)
T d1ky8a_ 247 ERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 324 (499)
T ss_dssp HHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred eEEeeccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCcc
Confidence 99999876 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeee---ecCCCCCcccccccccCc
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI---VNVNHTMKLMQEEAFGPI 438 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl---~~v~~~~~i~~eE~FGPV 438 (595)
|+|.++++++|||++.++++++++++++|+++||+++.||... ...++.++++ .++++||++++||+||||
T Consensus 325 G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~------~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPv 398 (499)
T d1ky8a_ 325 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPV 398 (499)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE------ETTEECCEEEECCHHHHTTSHHHHSCCCSSE
T ss_pred CCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccc------cccccccccccccccCCCCChhhhccccCce
Confidence 9999999999999999999999999999999999999998832 2334444444 345679999999999999
Q ss_pred eeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHH
Q 007627 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 518 (595)
Q Consensus 439 l~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl 518 (595)
++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. .+.+||||+|.||+|++||.+|+
T Consensus 399 l~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~ 477 (499)
T d1ky8a_ 399 ASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHG-IGYYPFGGRKKSGVFREGIGYAV 477 (499)
T ss_dssp EEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCT-TSSSCBCCEETTEESCBSTTTTH
T ss_pred EEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCC-CCCCCccccccCcCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999987664 45699999999999999999999
Q ss_pred hccceeeEEEEcc
Q 007627 519 RACCLVKSVVEDR 531 (595)
Q Consensus 519 ~~~t~~k~v~~~~ 531 (595)
++||+.|+|+++.
T Consensus 478 ~~~~~~k~i~~~~ 490 (499)
T d1ky8a_ 478 EAVTAYKTIVFNY 490 (499)
T ss_dssp HHHEEEEEEEEEC
T ss_pred HHhhCEEEEEEcC
Confidence 9999999998853
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3e-91 Score=757.18 Aligned_cols=443 Identities=28% Similarity=0.439 Sum_probs=407.0
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcC
Q 007627 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167 (595)
Q Consensus 88 v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~ 167 (595)
|++||++|++||++|+.+|.++|.++|++++++|++|+++|++++++|+||+..++..+|+..+++.++++++++.++..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999999999999999999999999999999999999999999999888999999999999999888877
Q ss_pred cccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCC
Q 007627 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247 (595)
Q Consensus 168 ~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGl 247 (595)
++.........+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++++ ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-----~~ 156 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-----YM 156 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-----HS
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-----cc
Confidence 6554443333456678999999999999999999999999999999999999999999999999988887753 58
Q ss_pred CCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHH
Q 007627 248 PENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 326 (595)
Q Consensus 248 p~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~ 326 (595)
|+++++++.|.......+.. .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~ 236 (446)
T d1ad3a_ 157 DQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 236 (446)
T ss_dssp CTTTEEECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHT
T ss_pred cccccccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhc
Confidence 99999999998877667777 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC
Q 007627 327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 406 (595)
Q Consensus 327 n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~ 406 (595)
|+||.|++++|||||++++|+|+++|.+.++.+ +|++.++++++||++++.+++++++++++ ++...|+.
T Consensus 237 ~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~---- 306 (446)
T d1ad3a_ 237 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGT---- 306 (446)
T ss_dssp TTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCC----
T ss_pred CCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhccccee----
Confidence 999999999999999999999999999999887 79999999999999999999999988764 34444443
Q ss_pred CCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCee
Q 007627 407 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 486 (595)
Q Consensus 407 ~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~ 486 (595)
....++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 307 -~~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~ 385 (446)
T d1ad3a_ 307 -WDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVT 385 (446)
T ss_dssp -EETTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEE
T ss_pred -ecCCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEE
Confidence 1356789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCcc
Q 007627 487 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAE 550 (595)
Q Consensus 487 IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~~ 550 (595)
||++..+...+.+||||+|.||+|+++|.+|+++||+.|+|+++.++ ...|..++|||+.
T Consensus 386 iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~~----~~~~~~~~~pp~~ 445 (446)
T d1ad3a_ 386 ANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLL----NEEAHKARYPPSP 445 (446)
T ss_dssp ESSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCCC----CCCTTGGGSSSCC
T ss_pred EeCCccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEccCC----CCccccccCCCCC
Confidence 99987766667799999999999999999999999999999987753 2456679999864
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=9.2e-90 Score=752.44 Aligned_cols=465 Identities=32% Similarity=0.464 Sum_probs=426.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++|||+|+|+.+ +++++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|.+|+++
T Consensus 3 ~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~ 80 (474)
T d1euha_ 3 QYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 80 (474)
T ss_dssp BCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3689999999875 46899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCccccc--CCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS--SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
|++++++|+||+..++ ..|+...+..++++.............. ......+...+++++|+|||++|+|||||+..+
T Consensus 81 la~~~~~e~Gk~~~~a-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~ 159 (474)
T d1euha_ 81 IGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLA 159 (474)
T ss_dssp HHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHhCCCcchh-ccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhh
Confidence 9999999999999998 5799999999999887766543322111 112223455688999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
+.++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.++.|++ +++.|+||||+.+|+
T Consensus 160 ~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~----eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~ 235 (474)
T d1euha_ 160 GSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFA----EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGE 235 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhchhhhhccccceecccccchHHHHHHHHHHH----HhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCcccccc
Confidence 9999999999999999999999999998887765 6899999999999985 78899988 899999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.+++.++ ++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++.++++...++.|
T Consensus 236 ~i~~~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~ 313 (474)
T d1euha_ 236 RIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313 (474)
T ss_dssp HHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred chhhhcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence 9999876 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
++.+. .++++++...+.+++.+.+.++...|+..+.++. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 314 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~ 385 (474)
T d1euha_ 314 NPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK-------REGNLICPILFDKVTTDMRLAWEEPFGPVLPII 385 (474)
T ss_dssp CGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred Ccccc-cccccccchHHHHHHHHHHHhhhcccccccccCC-------CCCCCcCCEEEecCCCcchhhhcccCCcEEEEE
Confidence 88754 4789999999999999999999988887765443 578999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+. .+.+||||+|+||+|++||++|+++||
T Consensus 386 ~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~ 464 (474)
T d1euha_ 386 RVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAGIQGVKYSIEAMT 464 (474)
T ss_dssp EESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEESCBSHHHHHHHTE
T ss_pred EeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCC-CCCCCccccccCccCccCHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999976554 455999999999999999999999999
Q ss_pred eeeEEEEc
Q 007627 523 LVKSVVED 530 (595)
Q Consensus 523 ~~k~v~~~ 530 (595)
+.|+|+++
T Consensus 465 ~~k~v~~~ 472 (474)
T d1euha_ 465 TVKSVVFD 472 (474)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEe
Confidence 99999876
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=7.8e-83 Score=700.42 Aligned_cols=449 Identities=16% Similarity=0.205 Sum_probs=384.8
Q ss_pred CCeEEeecCCCCcEEE-EecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChh
Q 007627 63 ETKVQCYEPATMKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (595)
Q Consensus 63 ~~~~~~~~P~tg~~l~-~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ 141 (595)
+++|+++||+|||.|+ +++.++.+||++|+++|++||++|++++.++|.++|+++++.|++|+++|++++++|+||+..
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~ 81 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 81 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 4689999999999997 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHhHHHHHHHHHHhchhhcCcccc-----cCCcccccccceEEEecceEEEEEcCcchhhHhh--HHHHHHHHh
Q 007627 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYR-----SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVF 214 (595)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~--~~~l~~ALa 214 (595)
++ .+|+..+++.++|+++.+++....+.. +..........+..++|+|||++|+|||||+.+. ..++++||+
T Consensus 82 ~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALa 160 (504)
T d1ez0a_ 82 RL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 160 (504)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHH
Confidence 98 579999999999999887765433221 1111123346678899999999999999998644 469999999
Q ss_pred cCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcC
Q 007627 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT 291 (595)
Q Consensus 215 aGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~ 291 (595)
+||+||+||||.+|.++.++.+++.+++.++|+|+|++|+|+|++ +.++.|++ +||+|+||||+.+|+.|++.++++
T Consensus 161 aGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~ 240 (504)
T d1ez0a_ 161 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 240 (504)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred HhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcc
Confidence 999999999999999999999999999999999999999999975 77899998 999999999999999999999999
Q ss_pred CCcEee--cCCCcceEEEcCCCCHHHHH--HHHHHHHHHcCCCCCCCCceEEEccchH-HHHHHHHHHHHHhccCCCCCC
Q 007627 292 LTPVTL--ELGGKDAFIVCDDVDVPHVA--QIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPPLA 366 (595)
Q Consensus 292 l~pv~l--ElGGk~p~IV~~daDl~~aa--~~i~~~~f~n~GQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~~ 366 (595)
++|+.+ |||||||+||++|||++.|+ ..+++++|.|+||.|++++|+||+++.+ +.|++.+++.++.. +
T Consensus 241 ~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~ 314 (504)
T d1ez0a_ 241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------S 314 (504)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------C
T ss_pred cccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc------c
Confidence 987655 99999999999999999875 4789999999999999999999887755 56777777766543 3
Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeec---CCCCCcccccccccCceeEEe
Q 007627 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN---VNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 367 ~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~---v~~~~~i~~eE~FGPVl~v~~ 443 (595)
+++.+||+++..+++++ ++.+.+.|+++..||. .+.+..|+++.. +..+|++++||+||||++|++
T Consensus 315 ~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~ 383 (504)
T d1ez0a_ 315 PSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVV 383 (504)
T ss_dssp CBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEE
T ss_pred cccccccchhhhhhhhh---hhhhhhhhhhcccccc--------cccccCCccccccccccccchhhcccccCCeeeeee
Confidence 46789999998887775 5667778888888776 344556665543 345789999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecC--cHHHHHHHHHHhc--cCCeeecCCCccc-----ccCCCCCCCcCCCCCCCCCc
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASNY-----MCQSLPFGGVKDSGFGRFAG 514 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~--d~~~~~~~~~~l~--~G~v~IN~~~~~~-----~~~~~PfGG~~~SG~G~~~G 514 (595)
|+|+||||+++|+++|||++||||+ |..++.+++++|+ +|+|+||++++.. ..+..||||.+.||+|+ .|
T Consensus 384 ~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~~-~G 462 (504)
T d1ez0a_ 384 CENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-VG 462 (504)
T ss_dssp ESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS-SS
T ss_pred cCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCCc-ch
Confidence 9999999999999999999999996 5568999999997 7999999975422 12335899999999664 68
Q ss_pred HHHHhccceeeEEEEccc
Q 007627 515 VEGLRACCLVKSVVEDRW 532 (595)
Q Consensus 515 ~~gl~~~t~~k~v~~~~~ 532 (595)
.+++++|+++ ++++.+
T Consensus 463 ~~~i~~f~r~--v~~q~~ 478 (504)
T d1ez0a_ 463 AEAIHRWLRP--VAYQAL 478 (504)
T ss_dssp GGGGGGGEEE--EEEESC
T ss_pred HHHHHHHhch--hhhccC
Confidence 9999999755 444544
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.2e-67 Score=562.14 Aligned_cols=392 Identities=17% Similarity=0.178 Sum_probs=316.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhH------------HHhHHH
Q 007627 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE------------IMTTCE 153 (595)
Q Consensus 86 ~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~E------------i~~~~~ 153 (595)
+|+++++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+||+..++ .+| +...++
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~-~~e~~~~rl~~~~~~i~~~~~ 79 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG-VKESLVDRLALNDKRIDEMIK 79 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcc-ccHHHHHHHhccHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999998876 334 334455
Q ss_pred HHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 007627 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (595)
Q Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~ 233 (595)
.++++......... .. ..........+.++|+||+++++|||||+.++++++++||++||+||+|||+.+|.++.+
T Consensus 80 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~ 155 (414)
T d1o20a_ 80 ACETVIGLKDPVGE-VI---DSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA 155 (414)
T ss_dssp HHHHHHHSCCCTTC-EE---EEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhhhhccc-cc---cccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccch
Confidence 55555443322111 10 011123456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHhCCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcc-eEEEcCCC
Q 007627 234 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD-AFIVCDDV 311 (595)
Q Consensus 234 l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~-p~IV~~da 311 (595)
+++++.+++...|+|.++++.+.+.. +....++ ..+.+.||||+.+++.+++.++++++++++|+||+| |+||++||
T Consensus 156 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dA 234 (414)
T d1o20a_ 156 IVSAIREALKETEIPESSVEFIENTDRSLVLEMI-RLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESA 234 (414)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHT-TCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTS
T ss_pred hhhHHHhhhhhccccccccccccccchhhhhhcc-cccccCeEEEcccHHHHHHHhhhccccceecccCCCCCeeccccc
Confidence 99999999999999999999887654 4444444 445566677777778888888888999999999866 57888999
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Q 007627 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 391 (595)
Q Consensus 312 Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~ 391 (595)
|++.|++.+++++|.| ||.|++++|++||+++||+|++.|.+..++..++.+.+ +.
T Consensus 235 d~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~----------~~------------- 290 (414)
T d1o20a_ 235 DLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGC----------EK------------- 290 (414)
T ss_dssp CHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEEC----------HH-------------
T ss_pred chhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccc----------hh-------------
Confidence 9999999999999877 99999999999999999999999999887754433211 10
Q ss_pred hcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHH
Q 007627 392 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 471 (595)
Q Consensus 392 ~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~ 471 (595)
...+.+.+.. .....++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 291 --------------------~~~~~~~~~~---~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~ 347 (414)
T d1o20a_ 291 --------------------TREIVPDVVP---ATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYS 347 (414)
T ss_dssp --------------------HHHHSTTSEE---CCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred --------------------hhhhccccee---cccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHH
Confidence 0111122221 12345789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCC--CCCC--cHHHHhccceeeEEEEccc
Q 007627 472 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF--GRFA--GVEGLRACCLVKSVVEDRW 532 (595)
Q Consensus 472 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~--G~~~--G~~gl~~~t~~k~v~~~~~ 532 (595)
+++++++++++|+|+||+...+... .|||+.+.||+ |+.| |++|+++||+.|+|+...+
T Consensus 348 ~a~~~~~~i~~G~V~IN~~~~~~~~--~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~ 410 (414)
T d1o20a_ 348 NAKKFVSEIDAAAVYVNASTRFTDG--GQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 410 (414)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCST--TTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHHHHHhCCeeEEEEeCCCcCCCC--CCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCC
Confidence 9999999999999999987554332 45555555554 5554 8999999999999987654
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.2e-52 Score=446.98 Aligned_cols=404 Identities=16% Similarity=0.119 Sum_probs=280.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHh------hCCChhhhhhh--------HHHhHH
Q 007627 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD------TGKTMVDASLG--------EIMTTC 152 (595)
Q Consensus 87 ~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e------~Gk~~~ea~~~--------Ei~~~~ 152 (595)
+++++++.|++|++.|+.+|.++|.++|+++++.|++|+++|+++..+| .|++. +... .+...+
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~--~~idRL~l~~~~ri~~~~ 81 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLAD--SLLKRLDLFKGDKFEVML 81 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCH--HHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcH--HHHHHHhcCchHHHHHHH
Confidence 4678899999999999999999999999999999999999999865544 44432 2111 133333
Q ss_pred HHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHH
Q 007627 153 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 232 (595)
Q Consensus 153 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~ 232 (595)
+.++..++..+..-. .........+...+..+.|+|||++| |||+| ..++...+.||++||+||+||++.++.|+.
T Consensus 82 ~~l~~i~~~~dpvg~--~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~ 157 (436)
T d1vlua_ 82 QGIKDVAELEDPVGK--VKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFR 157 (436)
T ss_dssp HHHHHHHHSCCSSSC--EEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHhcccccee--EeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHH
Confidence 444443332111000 00000011234566788999999988 77778 667788899999999999999999999999
Q ss_pred HHHHHHH----HHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEE
Q 007627 233 FYFRIIQ----AALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306 (595)
Q Consensus 233 ~l~~~~~----~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~I 306 (595)
.+.++++ +++.++|+|+++++++++..++++.|.. .+|.|+||||...++.+.+.+. +|++.|+||++|+|
T Consensus 158 ~l~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~ 234 (436)
T d1vlua_ 158 EMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIY 234 (436)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEE
T ss_pred HHHHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCcccee
Confidence 8888876 5567789999999999987777777776 8999999999999888877664 69999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHH
Q 007627 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386 (595)
Q Consensus 307 V~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~ 386 (595)
|++|||++.|++.++.++|++.|| |++.++++||+++++.|...+....+. |-. +. .++. +...
T Consensus 235 Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---gv~------l~--~~~~----~~~~ 298 (436)
T d1vlua_ 235 LDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---GVT------IH--ATKD----LKTA 298 (436)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---CCC------BE--ECHH----HHHH
T ss_pred ecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---CcE------EE--eCHH----HHHH
Confidence 999999999999999999999998 999999999999998886655554443 111 10 0111 2222
Q ss_pred HHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEe
Q 007627 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466 (595)
Q Consensus 387 i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVf 466 (595)
..+....+ |. ..+....|++....+.| +.+|.|+||++|++++|+||||+++|+..|||+++||
T Consensus 299 ~~~~~~~~------~~-------~~~~~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~ 362 (436)
T d1vlua_ 299 YFDKLNEL------GK-------LTEAIQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 362 (436)
T ss_dssp HHHHHHHH------TC-------CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred hhhhhhhc------cc-------ccccccccccCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEE
Confidence 22221111 11 12234445554333333 6899999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCc-CCC-CCCCCCcHHHHhccceeeEEEEcc
Q 007627 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGV-KDS-GFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 467 t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~-~~S-G~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
|+|.+.+++|++++++|.|+||....+.+...+.||+- |-| +-....|+.|++++|..|.++...
T Consensus 363 T~d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~ 429 (436)
T d1vlua_ 363 TENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429 (436)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECS
T ss_pred ECCHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECC
Confidence 99999999999999999999999866543322334432 222 223347999999999999998754
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=96.68 E-value=0.38 Score=48.09 Aligned_cols=324 Identities=15% Similarity=0.123 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhh---hhhHHHhH--------HHHHHHHHHhchhhcCcccccCC-c-cc
Q 007627 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDA---SLGEIMTT--------CEKITWLLSEGEKWLKPEYRSSG-R-SM 177 (595)
Q Consensus 111 ~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea---~~~Ei~~~--------~~~l~~~~~~~~~~~~~~~~~~~-~-~~ 177 (595)
.+..+.+.+.++.+-|.-..-.++...+-..+. ...|+..+ .+.|+...++.+++-..+..... . ..
T Consensus 30 ~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~~~e~~ 109 (431)
T d1k75a_ 30 TRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQ 109 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCceeecc
Confidence 344555666666666665555555543211110 11233322 22333344444433222211110 0 11
Q ss_pred ccccceEEEecceEEEEEcCcc---hhhHhhHHHHHHHHhcCCE--EEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcE
Q 007627 178 IHKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNG--IVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 252 (595)
Q Consensus 178 ~~~~~~v~~~PlGVV~~I~p~N---~P~~~~~~~l~~ALaaGN~--VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v 252 (595)
.+.....++.|+--|++.+|.- ||-. ++...+||-.||.. |+.-|....|.+ ++ +.+.+|..+ +
T Consensus 110 ~Gv~~g~~~~PI~~VGlYVPGG~A~ypSs-vLM~aiPAkvAGV~~Ivv~tPp~~~~~~---l~-----aa~~~Gv~~--i 178 (431)
T d1k75a_ 110 PGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIADEI---LY-----AAQLCGVQD--V 178 (431)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCHHH-HHHHHHHHHHHTCSEEEEEECSSCCHHH---HH-----HHHHTTCCE--E
T ss_pred CCceeeeeeeehhhheeeccCCCccchHH-HHHHHHHHHhcCCCceeEEeCCCCcchH---HH-----HHHHcCccc--e
Confidence 3445667889999999999965 6654 45557799999975 445555545532 11 123477754 2
Q ss_pred EeeeCChhHHHHHHh------CCCEEEEeCChhHHHHHHHHhhcCCCcEee-cCCCcceE-EE-cCCCCHHHHHHHHHHH
Q 007627 253 DVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTL-ELGGKDAF-IV-CDDVDVPHVAQIAVRA 323 (595)
Q Consensus 253 ~vv~g~~~~~~~L~~------~vd~I~ftGS~~~g~~v~~~aa~~l~pv~l-ElGGk~p~-IV-~~daDl~~aa~~i~~~ 323 (595)
--+ |+...-.+|.- .+|+|+=.|+.=|..+=..-..+.. .|-. -+-|-+=+ || ++++|.+.+|..++.-
T Consensus 179 y~~-GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQ 256 (431)
T d1k75a_ 179 FNV-GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 256 (431)
T ss_dssp EEC-CHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred Eec-CChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCC-ccccccccCCceEEEEecCCCCHHHHHHHHHhc
Confidence 212 44444444432 8999999998766432212222111 1111 12344443 33 4458999988888765
Q ss_pred HHHcCCCCCCCCceEEEcc--chHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecC
Q 007627 324 ALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401 (595)
Q Consensus 324 ~f~n~GQ~C~a~~rv~V~~--~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG 401 (595)
+=+...- .-++|.. +..++..+.+.+.++.+.- . +....+...
T Consensus 257 AEH~~~a-----~~ilvt~~~~l~~~v~~~i~~~l~~l~r----------------~------~i~~~s~~~-------- 301 (431)
T d1k75a_ 257 AEHGPDS-----QVILLTPAADMARRVAEAVERQLAELPR----------------A------ETARQALNA-------- 301 (431)
T ss_dssp HTTCTTC-----EEEEEESCHHHHHHHHHHHHHHHHTCSS----------------C------HHHHHHHTT--------
T ss_pred cCCcccc-----eeEEEeccHHHHHHHHHHHHHHhhhchH----------------H------HHHHhhhcc--------
Confidence 5443332 3445543 3455555555555544310 0 011111100
Q ss_pred CCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh-
Q 007627 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI- 480 (595)
Q Consensus 402 ~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l- 480 (595)
. .++-++|++||++++|.-- +=-..|.++|. +++..++
T Consensus 302 ---------------------------------~----~ii~v~~~~ea~~~~N~~A-PEHL~l~~~~~---~~~~~~i~ 340 (431)
T d1k75a_ 302 ---------------------------------S----RLIVTKDLAQCVEISNQYG-PEHLIIQTRNA---RELVDSIT 340 (431)
T ss_dssp ---------------------------------C----EEEECSSHHHHHHHHHHHC-CSEEEEESTTH---HHHGGGCC
T ss_pred ---------------------------------c----eEEEecCHHHHHHHHHhhh-HHHHHHHhcCH---HHHHhhhh
Confidence 1 1344689999999999832 12367777776 3466666
Q ss_pred ccCCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 481 QCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 481 ~~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
.+|.|++..+... ..++.||-| |..|+.+.-+...|...-++.
T Consensus 341 nAGsIflG~~sp~a~GDY~aGpnHvLPT~-----G~Ar~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 341 SAGSVFLGDWSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp CCSEEEESTTCCHHHHHHTSSSCCCCCCT-----TGGGTCCCCCGGGGEEEEEEE
T ss_pred hcchhhcCCCCcchhhccccCCCccCCCC-----CceeecCCCCHHHeeeeeeEE
Confidence 5999999876321 124556765 567777777788888776654
|