Citrus Sinensis ID: 007673
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| Polyadenylate-binding protein 2 | Binds the poly(A) tail of mRNA. | probable | P42731 |
| Polyadenylate-binding protein 1-A | Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. | probable | Q54BM2 |
| Polyadenylate-binding protein, cytoplasmic and nuclear | Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through translation termination-coupled poly(A) shortening, probably mediated by PAN. | probable | P31209 |
Prediction of Enzyme Commission Number
No EC number assigned to the protein, probably not an enzyme!
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 4F02, chain A Confidence level:very confident Coverage over the Query: 29-201 View the alignment between query and template View the model in PyMOL |
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Template: 1B7F, chain A Confidence level:very confident Coverage over the Query: 207-289,308-387 View the alignment between query and template View the model in PyMOL |
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Template: 3PGW, chain A Confidence level:very confident Coverage over the Query: 206-299 View the alignment between query and template View the model in PyMOL |
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Template: 2DYD, chain A Confidence level:very confident Coverage over the Query: 496-573 View the alignment between query and template View the model in PyMOL |
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Template: 3LVG, chain A Confidence level:probable Coverage over the Query: 311-414 View the alignment between query and template View the model in PyMOL |