Citrus Sinensis ID: 007715
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 592 | 2.2.26 [Sep-21-2011] | |||||||
| Q84P17 | 727 | Probable acyl-activating | yes | no | 0.984 | 0.801 | 0.688 | 0.0 | |
| F4KBF3 | 721 | Probable acyl-activating | no | no | 0.972 | 0.798 | 0.479 | 1e-151 | |
| A1U2S9 | 649 | Acetyl-coenzyme A synthet | yes | no | 0.628 | 0.573 | 0.278 | 2e-28 | |
| A8FUF1 | 650 | Acetyl-coenzyme A synthet | yes | no | 0.613 | 0.558 | 0.276 | 3e-28 | |
| Q88EH6 | 653 | Acetyl-coenzyme A synthet | yes | no | 0.613 | 0.555 | 0.277 | 4e-28 | |
| Q15YI8 | 646 | Acetyl-coenzyme A synthet | yes | no | 0.589 | 0.540 | 0.293 | 5e-28 | |
| A9KY56 | 650 | Acetyl-coenzyme A synthet | yes | no | 0.616 | 0.561 | 0.267 | 1e-27 | |
| A6WM52 | 650 | Acetyl-coenzyme A synthet | yes | no | 0.616 | 0.561 | 0.267 | 2e-27 | |
| A3D3E8 | 650 | Acetyl-coenzyme A synthet | yes | no | 0.616 | 0.561 | 0.267 | 2e-27 | |
| A4Y7Y7 | 650 | Acetyl-coenzyme A synthet | yes | no | 0.618 | 0.563 | 0.262 | 3e-27 |
| >sp|Q84P17|AEE18_ARATH Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/587 (68%), Positives = 483/587 (82%), Gaps = 4/587 (0%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
M K+I E+ +D +K GL LE+A+EFDK++ VI+ + D R+ W+ LV VLKPWHP
Sbjct: 1 MWKSIGELSCDDYVKAGLTLEDAKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHP 60
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
H LHQL+YYSVY++WD+S+ GPPLYWFPSL QSK TNLG +E HGP+LLG +YK+P+ S
Sbjct: 61 HPLHQLLYYSVYSNWDSSVHGPPLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLES 120
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
F LF++F+VEHPE YW + E+S+VF P+CIL+ KSK GTWLP +VLNIAECCL
Sbjct: 121 FELFRRFSVEHPEVYWSFVIDELSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCL 177
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
+PS+H +KED++VA+VWR + D+S VN MT KELREQVMLVANA+ F KGD IAIDM
Sbjct: 178 MPSSHPKKEDDSVAVVWRNEGFDDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDM 237
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
PMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLY
Sbjct: 238 PMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLY 297
Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR-PNYYSPVYNPVDAVV 359
S+V+ AAP K IVLPA G ++ + LREQD+SW DFLS+ H NYY P+Y PV++V+
Sbjct: 298 SRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVI 357
Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419
NILFSSGTTGEPKAIPWTQLS IR +GWAH+D++VG YCWPTNLGWVMGP ++FS F
Sbjct: 358 NILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCF 417
Query: 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
L GATLALY GSPL R FGKFVQDAGVTVLGTVPSLVK W+ TNC+EGL+WTKI+ FA+T
Sbjct: 418 LTGATLALYSGSPLGRGFGKFVQDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATT 477
Query: 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL 539
GE SNVDD LWLSSKA Y +IE CGGTEL+S+YI GS LQPQAFGAFST +MT ++I
Sbjct: 478 GEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIF 537
Query: 540 DECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYK 586
DE GVPYPDDQPC GEVGLFP +LGA+DRLLNA+H+EVYF+GMPMYK
Sbjct: 538 DENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYFKGMPMYK 584
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May be involved in the peroxisomal activation of 2,4-dichlorophenoxybutyric acid (2,4-DB), a precursor of active auxins that inhibit root growth. Arabidopsis thaliana (taxid: 3702) EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: - |
| >sp|F4KBF3|AAE17_ARATH Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana GN=AAE17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 534 bits (1375), Expect = e-151, Method: Compositional matrix adjust.
Identities = 283/590 (47%), Positives = 385/590 (65%), Gaps = 14/590 (2%)
Query: 3 KNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHG 62
K++ + D+ +G+ + +E+ + L+ +I S E W + ++R++L P P
Sbjct: 4 KSLNSITKSDIEALGISGDVSEKLLRDLEDIIHGSS--TPPETWIQ-ISRRILHPNLPFS 60
Query: 63 LHQLVYYSVYNDWDASIKGPPL-YWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSF 121
HQ++YY Y D+ GP L W P + LTN+G LE G + LG YK+P++SF
Sbjct: 61 FHQMMYYGCYKDF-----GPDLPAWIPDPKVASLTNVGKLLEKRGKEFLGGNYKNPVSSF 115
Query: 122 RLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDR-TDKSKHGGTWLPGSVLNIAECCL 180
FQ+F+V +PE YW+ L E++++F PKCIL++ T GG WLPG+ LN A CL
Sbjct: 116 SSFQEFSVSNPEVYWKTVLDELNILFSVPPKCILEKDTSGDNPGGKWLPGAYLNPARNCL 175
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239
RR +D + I WR++ D+ VN MT ELR QV L A+AL + + AIA+D
Sbjct: 176 TNGFKRRLDD--IVIRWRDEGSDDLPVNTMTLLELRSQVWLAAHALSALGLEEESAIAVD 233
Query: 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 299
MPM V +VIIYLAI+LAG+VVVSIADSF+ REI+TRL++SKAK IFTQD I+RG + PL
Sbjct: 234 MPMNVESVIIYLAIVLAGHVVVSIADSFSPREISTRLKISKAKAIFTQDVIIRGDKSIPL 293
Query: 300 YSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVV 359
Y +V+ A AIV+PA G+ + LRE+DLSW +FL + + R Y P A
Sbjct: 294 YRRVVDAEAPLAIVVPARGSSCRMKLREKDLSWNNFLGNA-RNLRGVEYVAAEKPAGAYT 352
Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419
NILFSSGTTGEPKAIPWT +S ++ A+ W H+D++ GDV WPTNLGW+MGP ++++S
Sbjct: 353 NILFSSGTTGEPKAIPWTNISPLKSAADAWCHLDVQRGDVVAWPTNLGWMMGPWLVYASL 412
Query: 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
+NGA + LY GSPL +F KFVQDA V+VLG +PS+V+ W+N+N G DW++IR F ST
Sbjct: 413 INGACMGLYNGSPLGPTFAKFVQDAEVSVLGVIPSIVRTWQNSNSTSGYDWSRIRCFGST 472
Query: 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL 539
GE SN+D+ LWL +A Y +IE CGGTE+ ++I GSLLQPQ+ AFSTA M L IL
Sbjct: 473 GEASNIDEYLWLMGRAHYKPVIEYCGGTEIGGSFISGSLLQPQSLAAFSTAAMGCKLFIL 532
Query: 540 DECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMV 589
DE P P VGE+ L P GAS LLN +H +VYF+GMP ++G +
Sbjct: 533 DEDSNPIPPYAAGVGELALCPHMFGASSTLLNGNHFKVYFQGMPTFQGQI 582
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May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|A1U2S9|ACSA_MARAV Acetyl-coenzyme A synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=acsA PE=3 SV=1 | Back alignment and function description |
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Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 185/416 (44%), Gaps = 44/416 (10%)
Query: 107 PKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVV--FREAPKCILDRTDKSKHG 164
P++ RA + ++++ +VE P +W K I + F + D + S
Sbjct: 11 PEVAERALVNKSQYEEMYRQ-SVEDPNTFWGEHGKRIDWIKPFTKVKNSTYDYNNLSIK- 68
Query: 165 GTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVAN 224
W VLN + CL H + + AI++ D D S +TY+EL E+ AN
Sbjct: 69 --WFEDGVLNASANCL--DRHLEQRGDQTAIIFEGD--DPSVSRNVTYRELYEETCKFAN 122
Query: 225 AL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKG 283
L D KGD + I MPM V + LA G + + F+ +A R+ K++
Sbjct: 123 VLKDQGVKKGDVVTIYMPMIVETAVAMLACARIGAIHSVVFGGFSPEALAARIVNGKSRF 182
Query: 284 IFTQDFILRGGRKFPLYSKVLGAAPL-------KAIVLPAIGNDVGIPLRE-QDLSWKDF 335
+ T D LRGGR PL V A K IV+ GND +P E +DL ++D
Sbjct: 183 VITADEGLRGGRAIPLKKNVDSALKHEDDAKVDKVIVVSRTGNDQ-VPWTEGRDLRYEDL 241
Query: 336 L--SSVDYHPRP-NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI 392
+ +S + P P N P++ +L++SG+TG PK + T + + ++
Sbjct: 242 MKNASAECQPEPMNAEDPLF--------MLYTSGSTGAPKGVLHTTGGYMVYASMTHQYV 293
Query: 393 -DLKVGDVYCWPTNLGWVMG-PVILFSSFLNGATLALYQGSPL---ERSFGKFVQDAGVT 447
D GDVY + GWV G IL+ NGA L++G P G+ V V
Sbjct: 294 FDYHDGDVYWCTADFGWVTGHSYILYGPLANGAITLLFEGVPNYPDSSRMGQVVDKHKVN 353
Query: 448 VLGTVPSLVKAW--RNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501
+L T P+ ++A + +C++G ++ S GE ++ + W WY+ +I
Sbjct: 354 ILYTAPTAIRALMAQGESCMDGTTRGSLKLLGSVGEP--INPEAW----EWYHRVI 403
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Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) (taxid: 351348) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|A8FUF1|ACSA_SHESH Acetyl-coenzyme A synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=acsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 179/402 (44%), Gaps = 39/402 (9%)
Query: 122 RLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECC 179
+++Q+ V +PE +W + I + P + +T H + W LN + C
Sbjct: 26 KMYQESIV-NPEGFWREHGQRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASANC 81
Query: 180 LLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAI 238
L H K+ + VAI+W D D +TY EL V ANAL + +GD + +
Sbjct: 82 L--DRHLEKDSDKVAIIWEGD--DAKDQRTITYGELHSDVCKFANALRSQGVRRGDIVTV 137
Query: 239 DMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFP 298
MPM A ++ LA G V + F+ IA+R+ K+K I T D +RGGR P
Sbjct: 138 YMPMVPEAAVVMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVIITADEGVRGGRIIP 197
Query: 299 LYSKVLGAAPL-------KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351
L + + A K IVL G DV + +D+ W+ + + H P
Sbjct: 198 LKANIDEALSHPDVDCVEKVIVLERTGGDVNW-VEGRDIKWESLMDTASEHCIPEEMG-- 254
Query: 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVM 410
+ + +L++SG+TG PK + T + A ++ D K G+VY ++GW+
Sbjct: 255 ---AEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKDGEVYWCTADVGWIT 311
Query: 411 G-PVILFSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKAW--RNTNC 464
G +++ NGAT+ +++G P G+ V V +L T P+L++A
Sbjct: 312 GHSYMVYGPLANGATVLIHEGVPNYPTPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQ 371
Query: 465 LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII--ESC 504
D + +R S GE ++ + W WYN +I E C
Sbjct: 372 FADFDGSSLRIMGSVGEP--INPEAW----RWYNEVIGHEHC 407
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Shewanella sediminis (strain HAW-EB3) (taxid: 425104) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q88EH6|ACSA1_PSEPK Acetyl-coenzyme A synthetase 1 OS=Pseudomonas putida (strain KT2440) GN=acsA1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 178/396 (44%), Gaps = 33/396 (8%)
Query: 107 PKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGG- 165
P++ D T ++Q+ +V +P+ +W + I + P + +T H
Sbjct: 11 PEVAATTLTDEATYKAMYQQ-SVINPDGFWREQAQRIDWI---KPFTKVKQTSFDDHHVD 66
Query: 166 -TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVAN 224
W LN++ CL H + + +AI+W D D S +TY+EL EQV AN
Sbjct: 67 IKWFADGTLNVSSNCL--DRHLEERGDQLAIIWEGD--DPSEHRNITYRELHEQVCKFAN 122
Query: 225 ALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKG 283
AL +GD + I MPM AV+ LA G + + F+ +A R+ K+K
Sbjct: 123 ALRGQDVHRGDVVTIYMPMIPEAVVAMLACARIGAIHSVVFGGFSPEALAGRIIDCKSKV 182
Query: 284 IFTQDFILRGGRKFPLYSKV-------LGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFL 336
+ T D +RGGR+ PL + V ++ K IV G D+ + +D+ ++D +
Sbjct: 183 VITADEGVRGGRRTPLKANVDLALTNPETSSVQKIIVCKRTGGDIAWH-QHRDIWYEDLM 241
Query: 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLK 395
H P + + IL++SG+TG+PK + T + A + D +
Sbjct: 242 KVASSHCAPKEMG-----AEEALFILYTSGSTGKPKGVLHTTGGYLVYAALTHERVFDYR 296
Query: 396 VGDVYCWPTNLGWVMG-PVILFSSFLNGATLALYQGSP----LERSFGKFVQDAGVTVLG 450
G+VY ++GWV G I++ NGAT L++G P + R K V V +L
Sbjct: 297 PGEVYWCTADVGWVTGHSYIVYGPLANGATTLLFEGVPNYPDITR-VSKIVDKHKVNILY 355
Query: 451 TVPSLVKAW--RNTNCLEGLDWTKIRSFASTGETSN 484
T P+ ++A +EG D + +R S GE N
Sbjct: 356 TAPTAIRAMMAEGQAAVEGADGSSLRLLGSVGEPIN 391
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Pseudomonas putida (strain KT2440) (taxid: 160488) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q15YI8|ACSA_PSEA6 Acetyl-coenzyme A synthetase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=acsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 170/389 (43%), Gaps = 40/389 (10%)
Query: 117 PITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGG-TWLPGSVLNI 175
P R++ + +VE PE +W K + V + P I + + + H W LN+
Sbjct: 20 PADYARMYAE-SVEQPEVFWAEQAKSLDWV--KTPTKIKNTSFDAHHVSIKWFEDGELNV 76
Query: 176 AECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGD 234
A C+ H K + A +W D D + +++TY L ++V +AN L + KGD
Sbjct: 77 AYNCI--DRHLAKRGHVTAFIWEGD--DPHSHDIITYHRLHDEVAKIANGLRKLGVGKGD 132
Query: 235 AIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGG 294
+AI MPM +AV LA G V I F+ IA R+ +AK + T D LR G
Sbjct: 133 RVAIYMPMIPQAVYAMLACARIGAVHTVIFGGFSPNAIADRVNNCQAKVLITADEGLRAG 192
Query: 295 RKFPLYSKVLGA-------APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY 347
+ PL V A + + IV G+ V + D+ W D P
Sbjct: 193 KHIPLKDNVDTALAEHDCPSMEQVIVFKHTGSHVS--WGKDDVWWHDLTDGCSTDCPPE- 249
Query: 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI------DLKVGDVYC 401
V N D + IL++SG+TG+PK + T + WA I D K GD+Y
Sbjct: 250 ---VMNAEDPLF-ILYTSGSTGQPKGVVHTTGGYLL-----WASITHKYVFDYKPGDIYW 300
Query: 402 WPTNLGWVMG-PVILFSSFLNGATLALYQGSPLE---RSFGKFVQDAGVTVLGTVPSLVK 457
++GWV G I++ NGAT +++G P R G+ V V +L T P+ ++
Sbjct: 301 CAADVGWVTGHSYIVYGPLANGATSVMFEGVPTYPDVRRIGQIVDKHKVNILYTAPTAIR 360
Query: 458 AWRNTNCL--EGLDWTKIRSFASTGETSN 484
A EG+ +R S GE N
Sbjct: 361 ALMAHGDFPTEGISGESLRLLGSVGEPIN 389
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Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) (taxid: 342610) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|A9KY56|ACSA_SHEB9 Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS195) GN=acsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 179/403 (44%), Gaps = 38/403 (9%)
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAEC 178
++ + ++ +PE +W K I + P + +T H + W LN +
Sbjct: 24 YKTMYQESIVNPEGFWREHGKRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASAN 80
Query: 179 CLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237
CL H + + VAI+W D E +TY EL +V ANAL + +GD +
Sbjct: 81 CL--DRHLAEHSDRVAIIWEGDNASEQ--RKITYGELHAEVCKFANALRSQGVRRGDIVT 136
Query: 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 297
I MPM A + LA G V + F+ IA+R+ K+K I T D +RGGR
Sbjct: 137 IYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVIITSDEGMRGGRAI 196
Query: 298 PLYSKVLGA-------APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSP 350
PL + A K IVL G V + ++D+ W + + Y P
Sbjct: 197 PLKRNIDDALKNPDVTTVEKVIVLKRTGGIVDW-VEDRDVWWHSLMETAS-----EYCQP 250
Query: 351 VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWV 409
+A + +L++SG+TG PK + T + + ++ D K G+VY ++GW+
Sbjct: 251 EEMDAEAPLFLLYTSGSTGNPKGVLHTTGGYMVYASMTHEYVFDYKAGEVYWCTADVGWI 310
Query: 410 MG-PVILFSSFLNGATLALYQGSPLERS---FGKFVQDAGVTVLGTVPSLVKAW--RNTN 463
G +++ NGAT+ +++G P S G+ + V++L T P+L++A
Sbjct: 311 TGHSYMVYGPLANGATVLIHEGVPNHPSPARLGEMIDRHKVSILYTAPTLIRALMAEGKQ 370
Query: 464 CLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII--ESC 504
+ D + +R S GE ++ + W WY+ +I E C
Sbjct: 371 HFDKFDGSSLRIMGSVGEP--INPEAW----RWYHEVIGHEHC 407
|
Shewanella baltica (strain OS195) (taxid: 399599) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|A6WM52|ACSA_SHEB8 Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS185) GN=acsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 177/403 (43%), Gaps = 38/403 (9%)
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAEC 178
++ + ++ +PE +W K I + P + +T H + W LN +
Sbjct: 24 YKTMYQESIVNPEGFWREHGKRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASAN 80
Query: 179 CLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237
CL H + + VAI+W D E +TY EL V ANAL + +GD +
Sbjct: 81 CL--DRHLAEHSDRVAIIWEGDNASEQ--RKITYGELHADVCKFANALRSQGVRRGDIVT 136
Query: 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 297
I MPM A + LA G V + F+ IA+R+ K+K I T D +RGGR
Sbjct: 137 IYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVIITSDEGMRGGRAI 196
Query: 298 PLYSKVLGA-------APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSP 350
PL + A K IVL G V + +D+ W + + Y P
Sbjct: 197 PLKRNIDDALKNPDVTTVEKVIVLKRTGGKVDW-VEGRDVWWHSLMETAS-----EYCQP 250
Query: 351 VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWV 409
+A + +L++SG+TG PK + T + + ++ D K G+VY ++GW+
Sbjct: 251 EEMDAEAPLFLLYTSGSTGNPKGVLHTTGGYMVYASMTHEYVFDYKAGEVYWCTADVGWI 310
Query: 410 MG-PVILFSSFLNGATLALYQGSPLERS---FGKFVQDAGVTVLGTVPSLVKAW--RNTN 463
G +++ NGAT+ +++G P S G+ + V++L T P+L++A
Sbjct: 311 TGHSYMVYGPLANGATVLIHEGVPNHPSPARLGEMIDRHKVSILYTAPTLIRALMAEGKQ 370
Query: 464 CLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII--ESC 504
+ D + +R S GE ++ + W WY+ +I E C
Sbjct: 371 HFDKFDGSSLRIMGSVGEP--INPEAW----RWYHEVIGHEHC 407
|
Shewanella baltica (strain OS185) (taxid: 402882) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|A3D3E8|ACSA_SHEB5 Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=acsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 177/403 (43%), Gaps = 38/403 (9%)
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAEC 178
++ + ++ +PE +W K I + P + +T H + W LN +
Sbjct: 24 YKTMYQESIVNPEGFWREHGKRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASAN 80
Query: 179 CLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237
CL H + + VAI+W D E +TY EL V ANAL + +GD +
Sbjct: 81 CL--DRHLAEHSDRVAIIWEGDNASEQ--RKITYGELHADVCKFANALRSQGVRRGDIVT 136
Query: 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 297
I MPM A + LA G V + F+ IA+R+ K+K I T D +RGGR
Sbjct: 137 IYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVIITSDEGMRGGRAI 196
Query: 298 PLYSKVLGA-------APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSP 350
PL + A K IVL G V + +D+ W + + Y P
Sbjct: 197 PLKRNIDDALKNPDVTTVEKVIVLKRTGGKVDW-VEGRDVWWHSLMETAS-----EYCQP 250
Query: 351 VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWV 409
+A + +L++SG+TG PK + T + + ++ D K G+VY ++GW+
Sbjct: 251 EEMDAEAPLFLLYTSGSTGNPKGVLHTTGGYMVYASMTHEYVFDYKAGEVYWCTADVGWI 310
Query: 410 MG-PVILFSSFLNGATLALYQGSPLERS---FGKFVQDAGVTVLGTVPSLVKAW--RNTN 463
G +++ NGAT+ +++G P S G+ + V++L T P+L++A
Sbjct: 311 TGHSYMVYGPLANGATVLIHEGVPNHPSPARLGEMIDRHKVSILYTAPTLIRALMAEGKQ 370
Query: 464 CLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII--ESC 504
+ D + +R S GE ++ + W WY+ +I E C
Sbjct: 371 HFDKFDGSSLRIMGSVGEP--INPEAW----RWYHEVIGHEHC 407
|
Shewanella baltica (strain OS155 / ATCC BAA-1091) (taxid: 325240) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|A4Y7Y7|ACSA_SHEPC Acetyl-coenzyme A synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=acsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 177/404 (43%), Gaps = 38/404 (9%)
Query: 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAE 177
++ + ++ +PE +W K I + P + +T H + W LN +
Sbjct: 23 QYKTMYQESIVNPEGFWREHGKRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASA 79
Query: 178 CCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAI 236
CL H + + VAI+W D E +TY EL V ANAL + +GD +
Sbjct: 80 NCL--DRHLSEHSDRVAIIWEGDNASEQ--RKITYGELHADVCKFANALRSQGVRRGDIV 135
Query: 237 AIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 296
I MPM A + LA G V + F+ IA+R+ K+K + T D +RGGR
Sbjct: 136 TIYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVVITSDEGMRGGRA 195
Query: 297 FPLYSKVLGA-------APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYS 349
PL + A + K IVL G + + +D+ W L + H +P
Sbjct: 196 IPLKRNIDDALNHPDVTSVEKVIVLKRTGGKIDW-VEGRDVWWHSLLETASEHCQPEEMG 254
Query: 350 PVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGW 408
+ + +L++SG+TG PK + T + + ++ D K G+VY ++GW
Sbjct: 255 -----AEDPLFLLYTSGSTGNPKGVLHTTGGYMVYASMTHEYVFDYKAGEVYWCTADVGW 309
Query: 409 VMG-PVILFSSFLNGATLALYQGSPLERS---FGKFVQDAGVTVLGTVPSLVKAW--RNT 462
+ G +++ NGAT+ +++G P S G+ + V +L T P+L++A
Sbjct: 310 ITGHSYMVYGPLANGATVLIHEGVPNHPSPARLGEMIDRHKVNILYTAPTLIRALMAEGK 369
Query: 463 NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII--ESC 504
+ D + +R S GE ++ + W WY+ +I E C
Sbjct: 370 QHFDQFDGSTLRIMGSVGEP--INPEAW----RWYHEVIGHEHC 407
|
Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) (taxid: 319224) EC: 6 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 592 | ||||||
| 225435726 | 727 | PREDICTED: acetyl-coenzyme A synthetase | 0.993 | 0.808 | 0.743 | 0.0 | |
| 380042388 | 727 | acyl-activating enzyme 14 [Cannabis sati | 0.986 | 0.803 | 0.746 | 0.0 | |
| 380042368 | 723 | acyl-activating enzyme 4, partial [Canna | 0.972 | 0.796 | 0.739 | 0.0 | |
| 380042386 | 715 | acyl-activating enzyme 13 [Cannabis sati | 0.967 | 0.801 | 0.713 | 0.0 | |
| 449503439 | 725 | PREDICTED: probable acyl-activating enzy | 0.989 | 0.808 | 0.681 | 0.0 | |
| 449448834 | 725 | PREDICTED: probable acyl-activating enzy | 0.989 | 0.808 | 0.681 | 0.0 | |
| 449503441 | 725 | PREDICTED: probable acyl-activating enzy | 0.989 | 0.808 | 0.675 | 0.0 | |
| 449448832 | 725 | PREDICTED: probable acyl-activating enzy | 0.989 | 0.808 | 0.673 | 0.0 | |
| 145336784 | 727 | acyl-activating enzyme 18 [Arabidopsis t | 0.984 | 0.801 | 0.688 | 0.0 | |
| 12323178 | 2655 | acetyl-CoA synthetase, putative; 45051-3 | 0.981 | 0.218 | 0.684 | 0.0 |
| >gi|225435726|ref|XP_002285701.1| PREDICTED: acetyl-coenzyme A synthetase [Vitis vinifera] gi|297746451|emb|CBI16507.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/588 (74%), Positives = 510/588 (86%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
MG + EVGV +L+K GL +EEA+EF++ILK + ++G D E+WRE+VAR+VL P HP
Sbjct: 1 MGMRVAEVGVGELVKAGLSMEEAQEFERILKAAVGGARGSDPSEVWREVVARRVLSPSHP 60
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
HGLH+LV++SVY +WD SI+GPPLYWFPSL +S TNLG +E +GP+LLG +YKDPITS
Sbjct: 61 HGLHRLVFHSVYAEWDESIRGPPLYWFPSLYESMHTNLGRLMETYGPRLLGLSYKDPITS 120
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
+ LFQKF+V++ E YW + LKE+SV+F AP+CILD TDKSKHGGTWLPG+VLNIAECCL
Sbjct: 121 YSLFQKFSVQNLEVYWSMVLKELSVLFHRAPRCILDTTDKSKHGGTWLPGAVLNIAECCL 180
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
LP ++ RK DN++A+VWR++ D+S VN +T KELREQVM+VAN LD FSKGDAIAIDM
Sbjct: 181 LPVSYPRKHDNSLAVVWRDEGNDDSPVNRLTLKELREQVMMVANVLDATFSKGDAIAIDM 240
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
PMTV AVIIYLAI+LAG+VVVSIADSFAA+EIATRL VSKAKGIFTQDFI+RGGRKFPLY
Sbjct: 241 PMTVHAVIIYLAIVLAGFVVVSIADSFAAKEIATRLHVSKAKGIFTQDFIVRGGRKFPLY 300
Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVN 360
S+V+ AAP K IVLPAIG DV + LREQDLSWKDFLS D+ PRPN YSPVY P+DAV N
Sbjct: 301 SRVVEAAPHKVIVLPAIGTDVDVQLREQDLSWKDFLSHADHLPRPNNYSPVYQPIDAVTN 360
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420
ILFSSGTTG+PKAIPWTQ+S IR +A+ WA I+++VGDV+CWPTNLGWVMGP IL++SFL
Sbjct: 361 ILFSSGTTGDPKAIPWTQVSPIRSSADAWAQINIQVGDVFCWPTNLGWVMGPTILYASFL 420
Query: 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480
GA LALY GSPL+R FGKFVQDAGVTVLGTVPSLVK W+NT C+EGLDWTKI+SFASTG
Sbjct: 421 TGAALALYHGSPLDRGFGKFVQDAGVTVLGTVPSLVKTWKNTGCMEGLDWTKIKSFASTG 480
Query: 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD 540
ETSNVDDDLWLSS+A+Y IIE CGGTEL+S+YIQGS+LQPQAFG FSTA MT G VILD
Sbjct: 481 ETSNVDDDLWLSSRAYYKPIIECCGGTELASSYIQGSVLQPQAFGTFSTAAMTTGFVILD 540
Query: 541 ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGM 588
E GVPYPDDQPCVGEVGLFPL +GA+D LLNADHEEVYF+GMPMYKGM
Sbjct: 541 ENGVPYPDDQPCVGEVGLFPLIMGATDWLLNADHEEVYFKGMPMYKGM 588
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|380042388|gb|AFD33358.1| acyl-activating enzyme 14 [Cannabis sativa] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/587 (74%), Positives = 503/587 (85%), Gaps = 3/587 (0%)
Query: 3 KNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHG 62
K+I EVGVEDL++ GL EEA F ++LK +SC+KG D E+WR LVAR+VLKPWHPHG
Sbjct: 4 KSISEVGVEDLVQAGLTTEEATGFQRVLKDSLSCTKGSDPSEVWRHLVARRVLKPWHPHG 63
Query: 63 LHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFR 122
LHQLVYYSVY WD S KGPP YWFPSL +SK TN+G +E HG LLG YKDPITS+
Sbjct: 64 LHQLVYYSVYAHWDVSSKGPPPYWFPSLYESKHTNMGGIMEKHGSSLLGPLYKDPITSYS 123
Query: 123 LFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTD-KSKHGGTWLPGSVLNIAECCLL 181
LFQKF+ +HPEAYW I LKE+SV F+E PKCILDR+D KSKHGG+WLPGSVLNIAECCLL
Sbjct: 124 LFQKFSAQHPEAYWSIVLKELSVSFQEEPKCILDRSDLKSKHGGSWLPGSVLNIAECCLL 183
Query: 182 PSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMP 241
P+ + RK+D+++AIVWR++ CD+S +N++T K+LREQV+ VA ALD MFSKGDAIAIDMP
Sbjct: 184 PTAYPRKDDDSLAIVWRDEGCDDSGINIITLKQLREQVISVAKALDAMFSKGDAIAIDMP 243
Query: 242 MTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYS 301
MT AVIIYLAIIL+G VVVSIADSFA +EI+ RLRVS+AK IFTQDFILRG RKFPLYS
Sbjct: 244 MTANAVIIYLAIILSGLVVVSIADSFAPKEISIRLRVSQAKAIFTQDFILRGSRKFPLYS 303
Query: 302 KVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNI 361
+V+ AAP K IVLPAIG++VGI LREQD+SW DFLSSV R YSP Y PVD ++NI
Sbjct: 304 RVVEAAPDKVIVLPAIGSNVGIQLREQDMSWGDFLSSVGTRSR--NYSPCYQPVDTLINI 361
Query: 362 LFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421
LFSSGTTGEPKAIPWTQLS IRC AE WAH+D++VGDV+CWPTNLGWVMGP+++FSSFL+
Sbjct: 362 LFSSGTTGEPKAIPWTQLSPIRCAAESWAHMDMQVGDVFCWPTNLGWVMGPILIFSSFLS 421
Query: 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481
GATLALY GSPL FGKFVQDAGVT LGTVPSLVKAW+NT C+ GLDWTKI+ FASTGE
Sbjct: 422 GATLALYHGSPLGYGFGKFVQDAGVTKLGTVPSLVKAWKNTQCMNGLDWTKIKCFASTGE 481
Query: 482 TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE 541
TSNVDDDLWLSS+A+Y +IE CGGTELSS+YIQGSLLQPQAFGAFST +MT LVILDE
Sbjct: 482 TSNVDDDLWLSSRAYYKPVIECCGGTELSSSYIQGSLLQPQAFGAFSTTSMTTSLVILDE 541
Query: 542 CGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGM 588
G P+PDDQ C+GEVGLFPLYLGA+DRLLNADHEEVYF+GMP+YKGM
Sbjct: 542 HGNPFPDDQACIGEVGLFPLYLGATDRLLNADHEEVYFKGMPLYKGM 588
|
Source: Cannabis sativa Species: Cannabis sativa Genus: Cannabis Family: Cannabaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|380042368|gb|AFD33348.1| acyl-activating enzyme 4, partial [Cannabis sativa] | Back alignment and taxonomy information |
|---|
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/579 (73%), Positives = 493/579 (85%), Gaps = 3/579 (0%)
Query: 3 KNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHG 62
+I EVGVEDL++ GL EEA F ++LK +SC+KG D E+WR LVAR+ LKPWHPHG
Sbjct: 1 NSISEVGVEDLVQAGLTTEEATGFQRVLKDSLSCTKGSDPSEVWRHLVARRALKPWHPHG 60
Query: 63 LHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFR 122
LHQLVYYSVY WD S KGPP YWFPSL +SK TN+G +E HG LLG YKDPITS+
Sbjct: 61 LHQLVYYSVYAHWDVSSKGPPPYWFPSLYESKHTNMGGIMEKHGSSLLGPLYKDPITSYS 120
Query: 123 LFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTD-KSKHGGTWLPGSVLNIAECCLL 181
LFQKF+ +HPEAYW I LKE+SV F+E PKCILDR+D KSKHGG+WLPGSVLN+AECCLL
Sbjct: 121 LFQKFSAQHPEAYWSIVLKELSVSFQEEPKCILDRSDLKSKHGGSWLPGSVLNVAECCLL 180
Query: 182 PSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMP 241
P+ + RK+D+++AIVWR++ CD+S +N++T K+LREQV+ VA ALD MFSKGDAIAIDMP
Sbjct: 181 PTAYPRKDDDSLAIVWRDEGCDDSGINIITLKQLREQVISVAKALDAMFSKGDAIAIDMP 240
Query: 242 MTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYS 301
MT AVIIYLAIIL+G VVVSIADSFA +EI+ RLRVS+AK IFTQDFILRG RKFPLYS
Sbjct: 241 MTANAVIIYLAIILSGLVVVSIADSFAPKEISIRLRVSQAKAIFTQDFILRGSRKFPLYS 300
Query: 302 KVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNI 361
+V+ AAP K IVLPAIG++VGI LREQD+SW DFLSSV R YSP Y PVD ++NI
Sbjct: 301 RVVEAAPDKVIVLPAIGSNVGIQLREQDMSWGDFLSSVG--TRSRNYSPCYQPVDTLINI 358
Query: 362 LFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421
LFSSGTTGEPKAIPWTQLS IRC AE WAH+D++VGDV+CWPTNLGWVMGP+++FSSFL+
Sbjct: 359 LFSSGTTGEPKAIPWTQLSPIRCAAESWAHMDMQVGDVFCWPTNLGWVMGPILIFSSFLS 418
Query: 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481
GATLALY GSPL FGKFVQDAGVT LGTVPSLVKAW+NT C+ GLDWTKI+ FASTGE
Sbjct: 419 GATLALYHGSPLGYGFGKFVQDAGVTKLGTVPSLVKAWKNTQCMNGLDWTKIKCFASTGE 478
Query: 482 TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE 541
TSNVDDDLWLSS+A+Y +IE CGGTELSS+YIQGSLLQPQAFGAFST +MT LVILDE
Sbjct: 479 TSNVDDDLWLSSRAYYKPVIECCGGTELSSSYIQGSLLQPQAFGAFSTTSMTTSLVILDE 538
Query: 542 CGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFR 580
G P+PDDQ C+GEVGLFPLYLGA+DRLLNADHEEVYF+
Sbjct: 539 HGNPFPDDQACIGEVGLFPLYLGATDRLLNADHEEVYFK 577
|
Source: Cannabis sativa Species: Cannabis sativa Genus: Cannabis Family: Cannabaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|380042386|gb|AFD33357.1| acyl-activating enzyme 13 [Cannabis sativa] | Back alignment and taxonomy information |
|---|
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/586 (71%), Positives = 489/586 (83%), Gaps = 13/586 (2%)
Query: 3 KNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHG 62
K+I EVGV+DL++ GL EEA F ++LK +SC+KG D E+WR LVAR+VLKPW
Sbjct: 4 KSISEVGVDDLVQAGLTTEEATGFQRVLKDSLSCTKGSDPSEVWRHLVARRVLKPW---- 59
Query: 63 LHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFR 122
SVY WD S KGPP YWFPSL SK TNLG +E HGP LLG YKDPITS+
Sbjct: 60 -------SVYAHWDVSSKGPPPYWFPSLYHSKDTNLGRLMEKHGPSLLGPLYKDPITSYS 112
Query: 123 LFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLP 182
LFQKF+VEHPE YW IALKE+SV F+E PKCILD++DKSKHGG+WLPG+VLNIAECCLLP
Sbjct: 113 LFQKFSVEHPEVYWSIALKELSVSFQEEPKCILDKSDKSKHGGSWLPGAVLNIAECCLLP 172
Query: 183 SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPM 242
+++ RK+D+++AIVWR++ D+S+VNL+T K+LREQV+ VA +LD MFSKGDAIA+DMPM
Sbjct: 173 TSYPRKDDDSLAIVWRDEGSDDSSVNLITLKQLREQVISVAKSLDAMFSKGDAIAMDMPM 232
Query: 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSK 302
T AVIIYLAIIL+G VVVSIADSFA +EIA+RL VS+AK IFTQDFILRGGRKFPLYS+
Sbjct: 233 TANAVIIYLAIILSGLVVVSIADSFAPKEIASRLHVSQAKAIFTQDFILRGGRKFPLYSR 292
Query: 303 VLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNIL 362
V+ AAP + IVLPA G+++GI LREQD+SW DFLSSV R YSP Y PVD+++NIL
Sbjct: 293 VVEAAPDRVIVLPATGSNIGIQLREQDMSWGDFLSSVGTRSRK--YSPCYQPVDSLINIL 350
Query: 363 FSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422
FSSGTTGEPKAIPWT LS IRC+++ WA++D+KVGDV CWPTNLGW +GP ILF+ FL+G
Sbjct: 351 FSSGTTGEPKAIPWTHLSPIRCSSDFWAYMDIKVGDVVCWPTNLGWALGPFILFTCFLSG 410
Query: 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGET 482
A LALY GSPL R FGKFVQDA VT LGTVPSLVK W+NT C++GLDWTKI+SFASTGET
Sbjct: 411 AVLALYHGSPLGRGFGKFVQDASVTKLGTVPSLVKTWKNTQCMKGLDWTKIKSFASTGET 470
Query: 483 SNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC 542
SNVDDDLWLSS+A+Y +IE CGGTEL+S+YIQGSLLQPQAFGAF+TATMT VI+DE
Sbjct: 471 SNVDDDLWLSSQAYYKPVIECCGGTELASSYIQGSLLQPQAFGAFNTATMTTSFVIIDEH 530
Query: 543 GVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGM 588
G PYPDDQ C GEVGL PLYLGASDRLLNADHEEVYF+GMP+YKGM
Sbjct: 531 GNPYPDDQACTGEVGLIPLYLGASDRLLNADHEEVYFKGMPLYKGM 576
|
Source: Cannabis sativa Species: Cannabis sativa Genus: Cannabis Family: Cannabaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449503439|ref|XP_004162003.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/588 (68%), Positives = 485/588 (82%), Gaps = 2/588 (0%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
MGK++ E+ +EDL+K GL L EA EF++IL+ V+S ++ E+WREL+AR+ LKP HP
Sbjct: 1 MGKSVWELDIEDLVKTGLNLHEAVEFNRILQNVLSTAQRSKPTEVWRELMARRALKPTHP 60
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
+ LH L+YYSVY +W+ S GPP YWFPS++QSKLTNLG +E+HGPKLLG +YKDPI+S
Sbjct: 61 YELHHLLYYSVYANWNISSNGPPPYWFPSINQSKLTNLGKIMELHGPKLLGASYKDPISS 120
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
F LFQK + + PE YW I L E+SV F++ P+CILDRT+KS WLP S+LNIAECCL
Sbjct: 121 FSLFQKLSYQSPEIYWSIVLHELSVTFQKPPRCILDRTEKSN--VRWLPDSILNIAECCL 178
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
LPS+ K+DN+ AIVWR + CD S VN MT K+LRE+V LVANALD FSKGDAIAIDM
Sbjct: 179 LPSSRPLKDDNSSAIVWRNEGCDNSNVNHMTLKQLREKVTLVANALDATFSKGDAIAIDM 238
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
P+TV AV+IYLAI+LAG VVVSIADSFAA E+A RLR+SKAKGIFTQDFILRGG+K+PLY
Sbjct: 239 PLTVDAVVIYLAIVLAGLVVVSIADSFAANEVAVRLRISKAKGIFTQDFILRGGKKYPLY 298
Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVN 360
S+V+ KAIV+PA GN + + LREQDLSW++FLS+ PR N YSPVY+ D V N
Sbjct: 299 SRVIQGGSCKAIVIPATGNRLDVDLREQDLSWEEFLSTAKEFPRSNRYSPVYHSSDGVTN 358
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420
ILFSSGTTGEPKAIPWTQLS IRC A+ WAH+D++ GDV+CWPTNLGWVMGPV ++SS L
Sbjct: 359 ILFSSGTTGEPKAIPWTQLSPIRCAADSWAHMDVQPGDVFCWPTNLGWVMGPVSVYSSLL 418
Query: 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480
GATLALY GSPL FGKFVQDAGVT+LGTVPSLVK W++T C+EGL+WTKIR FASTG
Sbjct: 419 AGATLALYHGSPLGHGFGKFVQDAGVTLLGTVPSLVKTWKDTRCMEGLNWTKIRHFASTG 478
Query: 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD 540
ETSNVDDDLWLSS+++Y I E CGGTEL+S+YI G+ LQPQAFGAF+TA+MT VILD
Sbjct: 479 ETSNVDDDLWLSSRSYYKPIFEFCGGTELASSYINGTPLQPQAFGAFTTASMTTEFVILD 538
Query: 541 ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGM 588
E G+PYP+DQPC+GE+GLFP+YLGAS+ LLNADH++VYF+GMP+Y GM
Sbjct: 539 EHGIPYPEDQPCIGEIGLFPIYLGASNELLNADHDKVYFKGMPIYNGM 586
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449448834|ref|XP_004142170.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/588 (68%), Positives = 485/588 (82%), Gaps = 2/588 (0%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
MGK++ E+ +EDL+K GL L EA EF++IL+ V+S ++ E+WREL+AR+ LKP HP
Sbjct: 1 MGKSVWELDIEDLVKTGLNLHEAVEFNRILQNVLSTAQRSKPTEVWRELMARRALKPTHP 60
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
+ LH+L+YYSVY +W+ S GPP YWFPS+DQSKLTNLG +E+HGPKLLG +YKDPI+S
Sbjct: 61 YELHRLLYYSVYANWNISSNGPPPYWFPSIDQSKLTNLGKIMELHGPKLLGASYKDPISS 120
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
F LFQK + + PE YW I L E+SV F++ P+CILDRT+KS WLP S+LNIAECCL
Sbjct: 121 FSLFQKLSYQSPEIYWSIVLHELSVTFQKPPRCILDRTEKSNV--RWLPDSILNIAECCL 178
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
LPS+ K+DN+ AIVWR + CD S VN MT K+LRE+V LVANALD FSKGDAIAIDM
Sbjct: 179 LPSSRPLKDDNSSAIVWRNEGCDNSNVNHMTLKQLREKVTLVANALDATFSKGDAIAIDM 238
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
P+TV AV+IYLAI+LAG VVVSIADSFAA E+A RLR+SKAKGIFTQDFILRGG+K+PLY
Sbjct: 239 PLTVDAVVIYLAIVLAGLVVVSIADSFAANEVAVRLRISKAKGIFTQDFILRGGKKYPLY 298
Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVN 360
S+V+ KAIV+PA GN + + LREQDLSW++FLS+ PR N YSPVY+ D V N
Sbjct: 299 SRVIQGGSCKAIVIPATGNRLDVDLREQDLSWEEFLSTAKEFPRSNRYSPVYHSSDGVTN 358
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420
ILFSSGTTGEPKAIPWTQ S IRC A+ WAH+D++ GDV+CWPTNLGWVMGPV ++SS L
Sbjct: 359 ILFSSGTTGEPKAIPWTQRSPIRCAADSWAHMDVQPGDVFCWPTNLGWVMGPVSVYSSLL 418
Query: 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480
GATLALY GSPL FGKFVQDAGVT+LGTVPSLVK W++T C+EGL+WTKIR FASTG
Sbjct: 419 AGATLALYHGSPLGYGFGKFVQDAGVTLLGTVPSLVKTWKDTRCMEGLNWTKIRHFASTG 478
Query: 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD 540
ETSNVDDDLWLSS+++Y I E CGGTEL+S+YI G+ LQPQAFGAF+TA+MT VILD
Sbjct: 479 ETSNVDDDLWLSSRSYYKPIFEFCGGTELASSYINGTPLQPQAFGAFTTASMTTEFVILD 538
Query: 541 ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGM 588
E G+PYP+DQPC+GE+GLFP+YLGAS+ LLNADH++VYF+GMP+Y GM
Sbjct: 539 EHGIPYPEDQPCIGEIGLFPIYLGASNELLNADHDKVYFKGMPIYNGM 586
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449503441|ref|XP_004162004.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/588 (67%), Positives = 489/588 (83%), Gaps = 2/588 (0%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
MGK+I E+G+EDL+K GLKL EA EF++IL+ V+S ++ E+WREL+AR+ LKP HP
Sbjct: 1 MGKSIWELGIEDLVKTGLKLHEAVEFNRILQNVLSTAQRSKPTEVWRELMARRALKPTHP 60
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
+ LH+L+YYSVY +W+ S GPP YWFPS+DQSKLTNLG +E+HGPKLLG +YKDPI+S
Sbjct: 61 YELHRLLYYSVYANWNISSNGPPPYWFPSIDQSKLTNLGKIMELHGPKLLGASYKDPISS 120
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
F LFQKF++++PE YW I L+E+S+ F++AP+CILDRT+K G WLP S+LNIAECCL
Sbjct: 121 FSLFQKFSIQNPEIYWSIVLQELSITFQKAPRCILDRTEKPN--GRWLPDSMLNIAECCL 178
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
S+ ++DN++AIVWR++ CD S VN MT K+LRE+V LVANALD FSKGD +AIDM
Sbjct: 179 RSSSRLLRDDNSLAIVWRDEGCDNSNVNHMTLKQLREKVTLVANALDATFSKGDVVAIDM 238
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
P+TV AV+IYLAI+LAG VVVSIADSFAA E+A RL +SKAKGIFTQDFILRGG+K+PLY
Sbjct: 239 PLTVDAVVIYLAIVLAGLVVVSIADSFAANEVAVRLLISKAKGIFTQDFILRGGKKYPLY 298
Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVN 360
S+V+ KAIV+PA GN + + LREQDLSW++F+S+ PR N YSP+Y+ +DA+ N
Sbjct: 299 SRVIEGGSCKAIVIPASGNRLEVDLREQDLSWEEFISTAKEFPRSNCYSPMYHSIDAMTN 358
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420
ILFSSGTTGEPKAIPWTQ S IRC A+ WAH+D++ GDV+CWPTNLGW MGPV ++S+FL
Sbjct: 359 ILFSSGTTGEPKAIPWTQRSPIRCAADSWAHMDVQPGDVFCWPTNLGWAMGPVSVYSAFL 418
Query: 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480
GATLALY GSPL FGKFVQDAGVT+LGTVPSLVK W++T C+EGL+WTKIR FASTG
Sbjct: 419 TGATLALYHGSPLGYGFGKFVQDAGVTMLGTVPSLVKTWKDTRCMEGLNWTKIRYFASTG 478
Query: 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD 540
ETSNVDDDLWLSS+++Y + E CGGTEL S++I GS +QPQAFGAFSTA+MT G VILD
Sbjct: 479 ETSNVDDDLWLSSRSYYKPLFECCGGTELGSSFIVGSPVQPQAFGAFSTASMTTGFVILD 538
Query: 541 ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGM 588
E G+P PDDQPC+GE+GLFP YLGAS LLNADH+EVYF+GMP+Y GM
Sbjct: 539 EHGIPSPDDQPCIGEIGLFPTYLGASSELLNADHDEVYFKGMPIYNGM 586
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449448832|ref|XP_004142169.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/588 (67%), Positives = 488/588 (82%), Gaps = 2/588 (0%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
MGK+I E+G+EDL+K GL L EA EF++IL+ V+S ++ E+WREL+AR+ LKP HP
Sbjct: 1 MGKSIWELGIEDLVKTGLNLHEAVEFNRILQNVLSTAQRSKPTEVWRELMARRALKPTHP 60
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
+ LH+L+YYSVY +W+ S GPP YWFPS+DQSKLTNLG +E+HGPKLLG +YKDPI+S
Sbjct: 61 YELHRLLYYSVYANWNISSNGPPPYWFPSIDQSKLTNLGKIMELHGPKLLGASYKDPISS 120
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
F LFQKF++++PE YW I L+E+S+ F++AP+CILDRT+K G WLP S+LNIAECCL
Sbjct: 121 FSLFQKFSIQNPEIYWSIVLQELSITFQKAPRCILDRTEKPN--GRWLPDSMLNIAECCL 178
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
S+ ++DN++AIVWR++ CD S VN MT K+LRE+V LVANALD FSKGD +AIDM
Sbjct: 179 RSSSRLLRDDNSLAIVWRDEGCDNSNVNHMTLKQLREKVTLVANALDATFSKGDVVAIDM 238
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
P+TV AV+IYLAI+LAG VVVSIADSFAA E+A RL +SKAKGIFTQDFILRGG+K+PLY
Sbjct: 239 PLTVDAVVIYLAIVLAGLVVVSIADSFAANEVAVRLLISKAKGIFTQDFILRGGKKYPLY 298
Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVN 360
S+V+ KAIV+PA GN + + LREQDLSW++F+S+ PR N YSP+Y+ +DA+ N
Sbjct: 299 SRVIEGGSCKAIVIPASGNRLEVDLREQDLSWEEFISTAKEFPRSNCYSPMYHSIDAMTN 358
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420
ILFSSGTTGEPKAIPWTQ S IRC A+ WAH+D++ GDV+CWPTNLGW MGPV ++S+FL
Sbjct: 359 ILFSSGTTGEPKAIPWTQRSPIRCAADSWAHMDVQPGDVFCWPTNLGWAMGPVSVYSAFL 418
Query: 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480
GATLALY GSPL FGKFVQDAGVT+LGTVPSLVK W++T C+EGL+WTKIR FASTG
Sbjct: 419 TGATLALYHGSPLGYGFGKFVQDAGVTMLGTVPSLVKTWKDTRCMEGLNWTKIRYFASTG 478
Query: 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD 540
ETSNVDDDLWLSS+++Y + E CGGTEL S++I GS +QPQAFGAFSTA+MT G VILD
Sbjct: 479 ETSNVDDDLWLSSRSYYKPLFECCGGTELGSSFIVGSPVQPQAFGAFSTASMTTGFVILD 538
Query: 541 ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGM 588
E G+P PDDQPC+GE+GLFP YLGAS LLNADH+EVYF+GMP+Y GM
Sbjct: 539 EHGIPSPDDQPCIGEIGLFPTYLGASSELLNADHDEVYFKGMPIYNGM 586
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145336784|ref|NP_175929.3| acyl-activating enzyme 18 [Arabidopsis thaliana] gi|75297963|sp|Q84P17.1|AEE18_ARATH RecName: Full=Probable acyl-activating enzyme 18, peroxisomal gi|29893268|gb|AAP03028.1| acyl-activating enzyme 18 [Arabidopsis thaliana] gi|332195104|gb|AEE33225.1| acyl-activating enzyme 18 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/587 (68%), Positives = 483/587 (82%), Gaps = 4/587 (0%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
M K+I E+ +D +K GL LE+A+EFDK++ VI+ + D R+ W+ LV VLKPWHP
Sbjct: 1 MWKSIGELSCDDYVKAGLTLEDAKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHP 60
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
H LHQL+YYSVY++WD+S+ GPPLYWFPSL QSK TNLG +E HGP+LLG +YK+P+ S
Sbjct: 61 HPLHQLLYYSVYSNWDSSVHGPPLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLES 120
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
F LF++F+VEHPE YW + E+S+VF P+CIL+ KSK GTWLP +VLNIAECCL
Sbjct: 121 FELFRRFSVEHPEVYWSFVIDELSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCL 177
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
+PS+H +KED++VA+VWR + D+S VN MT KELREQVMLVANA+ F KGD IAIDM
Sbjct: 178 MPSSHPKKEDDSVAVVWRNEGFDDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDM 237
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
PMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLY
Sbjct: 238 PMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLY 297
Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR-PNYYSPVYNPVDAVV 359
S+V+ AAP K IVLPA G ++ + LREQD+SW DFLS+ H NYY P+Y PV++V+
Sbjct: 298 SRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVI 357
Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419
NILFSSGTTGEPKAIPWTQLS IR +GWAH+D++VG YCWPTNLGWVMGP ++FS F
Sbjct: 358 NILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCF 417
Query: 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
L GATLALY GSPL R FGKFVQDAGVTVLGTVPSLVK W+ TNC+EGL+WTKI+ FA+T
Sbjct: 418 LTGATLALYSGSPLGRGFGKFVQDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATT 477
Query: 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL 539
GE SNVDD LWLSSKA Y +IE CGGTEL+S+YI GS LQPQAFGAFST +MT ++I
Sbjct: 478 GEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIF 537
Query: 540 DECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYK 586
DE GVPYPDDQPC GEVGLFP +LGA+DRLLNA+H+EVYF+GMPMYK
Sbjct: 538 DENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYFKGMPMYK 584
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|12323178|gb|AAG51574.1|AC027034_20 acetyl-CoA synthetase, putative; 45051-31547 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/587 (68%), Positives = 481/587 (81%), Gaps = 6/587 (1%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
M K+I E+ +D +K GL LE+A+EFDK++ VI+ + D R+ W+ LV VLKPWHP
Sbjct: 1 MWKSIGELSCDDYVKAGLTLEDAKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHP 60
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
H LHQL+YYSVY++WD+S+ GPPLYWFPSL QSK TNLG +E HGP+LLG +YK+P+ S
Sbjct: 61 HPLHQLLYYSVYSNWDSSVHGPPLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLES 120
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
F LF++F+VEHPE YW + E+S+VF P+CIL+ KSK GTWLP +VLNIAECCL
Sbjct: 121 FELFRRFSVEHPEVYWSFVIDELSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCL 177
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
+PS+H +KED++VA+VWR + D+S VN MT KELREQVMLVANA+ F KGD IAIDM
Sbjct: 178 MPSSHPKKEDDSVAVVWRNEGFDDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDM 237
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
PMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLY
Sbjct: 238 PMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLY 297
Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR-PNYYSPVYNPVDAVV 359
S+V+ AAP K IVLPA G ++ + LREQD+SW DFLS+ H NYY P+Y PV++V+
Sbjct: 298 SRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVI 357
Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419
NILFSSGTTGEPKAIPWTQLS IR +GWAH+D++VG YCWPTNLGWVMGP ++FS F
Sbjct: 358 NILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCF 417
Query: 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
L GATLALY GSPL R FGKF DAGVTVLGTVPSLVK W+ TNC+EGL+WTKI+ FA+T
Sbjct: 418 LTGATLALYSGSPLGRGFGKF--DAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATT 475
Query: 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL 539
GE SNVDD LWLSSKA Y +IE CGGTEL+S+YI GS LQPQAFGAFST +MT ++I
Sbjct: 476 GEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIF 535
Query: 540 DECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYK 586
DE GVPYPDDQPC GEVGLFP +LGA+DRLLNA+H+EVYF+GMPMYK
Sbjct: 536 DENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYFKGMPMYK 582
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 592 | ||||||
| TAIR|locus:2035721 | 727 | AAE18 "acyl-activating enzyme | 0.984 | 0.801 | 0.688 | 3e-227 | |
| TAIR|locus:2178277 | 721 | AAE17 "acyl-activating enzyme | 0.971 | 0.797 | 0.483 | 7.3e-146 | |
| TIGR_CMR|BA_2553 | 646 | BA_2553 "acetoacetyl-CoA synth | 0.785 | 0.719 | 0.272 | 8.1e-35 | |
| DICTYBASE|DDB_G0277815 | 674 | acsA "acetyl-CoA synthetase" [ | 0.662 | 0.581 | 0.254 | 2.2e-26 | |
| TIGR_CMR|CPS_3955 | 648 | CPS_3955 "acetyl-CoA synthetas | 0.633 | 0.578 | 0.265 | 1.5e-25 | |
| TIGR_CMR|SO_2743 | 650 | SO_2743 "acetyl-coenzyme A syn | 0.611 | 0.556 | 0.266 | 1.6e-24 | |
| TIGR_CMR|SPO_1813 | 654 | SPO_1813 "acetyl-coenzyme A sy | 0.626 | 0.567 | 0.259 | 2.7e-24 | |
| UNIPROTKB|P27550 | 652 | acs [Escherichia coli K-12 (ta | 0.535 | 0.486 | 0.290 | 2.1e-23 | |
| MGI|MGI:2685720 | 682 | Acss3 "acyl-CoA synthetase sho | 0.619 | 0.538 | 0.272 | 5.1e-23 | |
| ZFIN|ZDB-GENE-050320-139 | 693 | acss1 "acyl-CoA synthetase sho | 0.652 | 0.556 | 0.247 | 5.3e-23 |
| TAIR|locus:2035721 AAE18 "acyl-activating enzyme 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2193 (777.0 bits), Expect = 3.0e-227, P = 3.0e-227
Identities = 404/587 (68%), Positives = 483/587 (82%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
M K+I E+ +D +K GL LE+A+EFDK++ VI+ + D R+ W+ LV VLKPWHP
Sbjct: 1 MWKSIGELSCDDYVKAGLTLEDAKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHP 60
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
H LHQL+YYSVY++WD+S+ GPPLYWFPSL QSK TNLG +E HGP+LLG +YK+P+ S
Sbjct: 61 HPLHQLLYYSVYSNWDSSVHGPPLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLES 120
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
F LF++F+VEHPE YW + E+S+VF P+CIL+ KSK GTWLP +VLNIAECCL
Sbjct: 121 FELFRRFSVEHPEVYWSFVIDELSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCL 177
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
+PS+H +KED++VA+VWR + D+S VN MT KELREQVMLVANA+ F KGD IAIDM
Sbjct: 178 MPSSHPKKEDDSVAVVWRNEGFDDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDM 237
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
PMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLY
Sbjct: 238 PMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLY 297
Query: 301 SKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR-PNYYSPVYNPVDAVV 359
S+V+ AAP K IVLPA G ++ + LREQD+SW DFLS+ H NYY P+Y PV++V+
Sbjct: 298 SRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVI 357
Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419
NILFSSGTTGEPKAIPWTQLS IR +GWAH+D++VG YCWPTNLGWVMGP ++FS F
Sbjct: 358 NILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCF 417
Query: 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
L GATLALY GSPL R FGKFVQDAGVTVLGTVPSLVK W+ TNC+EGL+WTKI+ FA+T
Sbjct: 418 LTGATLALYSGSPLGRGFGKFVQDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATT 477
Query: 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL 539
GE SNVDD LWLSSKA Y +IE CGGTEL+S+YI GS LQPQAFGAFST +MT ++I
Sbjct: 478 GEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIF 537
Query: 540 DECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYK 586
DE GVPYPDDQPC GEVGLFP +LGA+DRLLNA+H+EVYF+GMPMYK
Sbjct: 538 DENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYFKGMPMYK 584
|
|
| TAIR|locus:2178277 AAE17 "acyl-activating enzyme 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1425 (506.7 bits), Expect = 7.3e-146, P = 7.3e-146
Identities = 286/591 (48%), Positives = 388/591 (65%)
Query: 3 KNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHG 62
K++ + D+ +G+ + +E+ + L+ +I S E W + ++R++L P P
Sbjct: 4 KSLNSITKSDIEALGISGDVSEKLLRDLEDIIHGSS--TPPETWIQ-ISRRILHPNLPFS 60
Query: 63 LHQLVYYSVYNDWDASIKGPPL-YWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSF 121
HQ++YY Y D+ GP L W P + LTN+G LE G + LG YK+P++SF
Sbjct: 61 FHQMMYYGCYKDF-----GPDLPAWIPDPKVASLTNVGKLLEKRGKEFLGGNYKNPVSSF 115
Query: 122 RLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDR-TDKSKHGGTWLPGSVLNIAECCL 180
FQ+F+V +PE YW+ L E++++F PKCIL++ T GG WLPG+ LN A CL
Sbjct: 116 SSFQEFSVSNPEVYWKTVLDELNILFSVPPKCILEKDTSGDNPGGKWLPGAYLNPARNCL 175
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239
RR +D + I WR++ D+ VN MT ELR QV L A+AL + + AIA+D
Sbjct: 176 TNGFKRRLDD--IVIRWRDEGSDDLPVNTMTLLELRSQVWLAAHALSALGLEEESAIAVD 233
Query: 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 299
MPM V +VIIYLAI+LAG+VVVSIADSF+ REI+TRL++SKAK IFTQD I+RG + PL
Sbjct: 234 MPMNVESVIIYLAIVLAGHVVVSIADSFSPREISTRLKISKAKAIFTQDVIIRGDKSIPL 293
Query: 300 YSKVLGA-APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAV 358
Y +V+ A APL AIV+PA G+ + LRE+DLSW +FL + + R Y P A
Sbjct: 294 YRRVVDAEAPL-AIVVPARGSSCRMKLREKDLSWNNFLGNAR-NLRGVEYVAAEKPAGAY 351
Query: 359 VNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418
NILFSSGTTGEPKAIPWT +S ++ A+ W H+D++ GDV WPTNLGW+MGP ++++S
Sbjct: 352 TNILFSSGTTGEPKAIPWTNISPLKSAADAWCHLDVQRGDVVAWPTNLGWMMGPWLVYAS 411
Query: 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478
+NGA + LY GSPL +F KFVQDA V+VLG +PS+V+ W+N+N G DW++IR F S
Sbjct: 412 LINGACMGLYNGSPLGPTFAKFVQDAEVSVLGVIPSIVRTWQNSNSTSGYDWSRIRCFGS 471
Query: 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVI 538
TGE SN+D+ LWL +A Y +IE CGGTE+ ++I GSLLQPQ+ AFSTA M L I
Sbjct: 472 TGEASNIDEYLWLMGRAHYKPVIEYCGGTEIGGSFISGSLLQPQSLAAFSTAAMGCKLFI 531
Query: 539 LDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMV 589
LDE P P VGE+ L P GAS LLN +H +VYF+GMP ++G +
Sbjct: 532 LDEDSNPIPPYAAGVGELALCPHMFGASSTLLNGNHFKVYFQGMPTFQGQI 582
|
|
| TIGR_CMR|BA_2553 BA_2553 "acetoacetyl-CoA synthase, putative" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 398 (145.2 bits), Expect = 8.1e-35, P = 8.1e-35
Identities = 138/507 (27%), Positives = 229/507 (45%)
Query: 86 WFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISV 145
WFP+ + + T L + K LG Y+D + F ++E +W A K +
Sbjct: 6 WFPTEEYKEKTRLYGWM-----KSLG--YED----YETFYNKSIEETAWFWGEAEKVVGY 54
Query: 146 VFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDES 205
+ + +LD + + W G N+ E L + +D T + +
Sbjct: 55 QWMKPYTEVLDLQNGTPFA-QWYNGGTCNVVESVL---SRWLADDETRTQPALQYEGENG 110
Query: 206 AVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264
TY+EL V AN L KGD + I MPM V+ LA++ G ++ I
Sbjct: 111 TSKSFTYEELDSWVSRAANGLKHAGIEKGDRVTIYMPMIPETVVAMLAVMKIGAIISPIF 170
Query: 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---PL--KAIVLPAIGN 319
FA+ + TR++ + +K I T D R G+ L +V A P K +++ GN
Sbjct: 171 SGFASDAVMTRVQAAGSKMIITADGFSRRGKIVSLKDEVDKACEHCPTVEKVVIVRHAGN 230
Query: 320 DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQL 379
D P D SW S+++ +P ++ + D ++ ++++SGTTG+PK T
Sbjct: 231 DF-TP-HNYDFSW----STLEKE-KPFVHAEEMHSDDPLM-LIYTSGTTGKPKGTVHTHA 282
Query: 380 S-SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP----LE 434
++ + +++K GD W T++GW+MGP +LF S +NGAT+ +Y+G P +
Sbjct: 283 GFPLKAAFDAGFGMNIKQGDRVLWVTDMGWMMGPFLLFGSLINGATMVMYEGVPDFPKAD 342
Query: 435 RSFGKFVQDAGVTVLGTVPSLVKAW--RNTNCLEGLDWTKIRSFASTGETSNVDDDLWLS 492
R + + V +T LG P+L++A + + + FASTGE N D +WL
Sbjct: 343 RLW-ETVDKYEITHLGISPTLIRALMAKGDEYVNKHSLKSLEVFASTGEPWNPDPWMWLF 401
Query: 493 SKAWYN--AIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQ 550
+ I GGTE+S L++P A +F+ + V+LD+ G P D+
Sbjct: 402 ETVGKSNVPICNYSGGTEISGGIFGNVLIKPIAPISFNASLPGMAAVVLDDQGNPIRDE- 460
Query: 551 PCVGEVGLFPLYLGASDRLLNADHEEV 577
VGE+ L ++G + D V
Sbjct: 461 --VGELCLEKPWVGMTKSFWEDDERYV 485
|
|
| DICTYBASE|DDB_G0277815 acsA "acetyl-CoA synthetase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 326 (119.8 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 106/416 (25%), Positives = 189/416 (45%)
Query: 107 PKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT 166
P + + + + K ++E P +W+ KE F + + K +
Sbjct: 21 PSFSTKCHISSVEQYNEMYKESIESPNQFWDKKAKEFLTWFSDYTT--VQHGSFEKGDIS 78
Query: 167 WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL 226
W +N++ C+ H ++ + VAI++ D +E+ V +TY+E+ E+V ++N L
Sbjct: 79 WFLNGKINVSYNCI--DRHLKENADKVAILFEGD--EETMVKKVTYREMFEEVCRLSNLL 134
Query: 227 DTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
++ KGD +AI +P T A+ LA G + I F I +R+ +K + I
Sbjct: 135 ISLGVGKGDTVAIYLPNTPTAIYSMLACARIGAIHSVIFAGFGYESIVSRVHDAKCRVII 194
Query: 286 TQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLS---WKDFLSSVDY 341
T D LRGGR PL K+ K + + + G P + S W D + +D+
Sbjct: 195 TADEGLRGGRYIPLKEKIDQVVQHCKLVQHVLVFKNTGRPTITFNPSIDIWADE-AMLDH 253
Query: 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVY 400
P Y PV+ + + IL++SG+TG PK + TQ + A ++ D DVY
Sbjct: 254 RP---YCPPVWLDSEDPLFILYTSGSTGTPKGLVHTQAGYLLYAAMTHRYVFDYHDSDVY 310
Query: 401 CWPTNLGWVMG-PVILFSSFLNGATLALYQGSPLERS---FGKFVQDAGVTVLGTVPSLV 456
++GW+ G I++ NGAT +++G+PL + + + VQ +T T P+ +
Sbjct: 311 ACMADVGWITGHSYIVYGPLANGATTFIFEGTPLYPTPARYWEMVQRHKITQFYTAPTAI 370
Query: 457 KAWRN--TNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN--AIIESCGGTE 508
++ + + D + +R S GE N + W ++ AI+++ TE
Sbjct: 371 RSLMKFPISFTQQSDKSSLRVLGSVGEPINPEAWRWFNTNVGEGRCAIVDTYWQTE 426
|
|
| TIGR_CMR|CPS_3955 CPS_3955 "acetyl-CoA synthetase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 318 (117.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 108/407 (26%), Positives = 179/407 (43%)
Query: 108 KLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTW 167
K + D T +++K ++E P+ +W KE ++ P + + D W
Sbjct: 13 KAKAHTHIDAATYDAMYKK-SIEQPDEFWGEQAKEFIDWYK--PWDSVSKVDLKNSEINW 69
Query: 168 LPGSVLNIAECCLLPSNHRRKEDNTVAIVWR-EDRCDESAVNLMTYKELREQVMLVANAL 226
G LN++ C+ H + N AI++ +D D+S V TY+EL + V AN L
Sbjct: 70 FSGGKLNVSYNCI--DRHLATKANDTAIIFEGDDPNDDSKV---TYQELHDHVCRFANLL 124
Query: 227 -DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
+ KGD + I MPM LA G + + F+ I R+ + K +
Sbjct: 125 KERGVKKGDRVCIYMPMIPEVGYAMLACARIGAIHSVVFGGFSTESIKARVLDADCKVVI 184
Query: 286 TQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345
T D LRGG++ PL S V A I P + + + + D++W D + ++Y
Sbjct: 185 TADQSLRGGKRIPLKSNVDAAV----IDCPNVHSVIVVARTGGDVAWNDKVD-INYEEAV 239
Query: 346 NYYSPVYNP--VDAV--VNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVY 400
S + P +DA + +L++SG+TG PK + T I A ++ D K G+VY
Sbjct: 240 AKQSAICEPEVMDAEDPLFVLYTSGSTGTPKGVVHTCGGYILYAAMTHKYVFDYKEGEVY 299
Query: 401 CWPTNLGWVMG-PVILFSSFLNGATLALYQGSPLERSFGKFVQDAG---VTVLGTVPSLV 456
+ GW+ G I + NGAT +++G P G+F Q V V T P+ +
Sbjct: 300 WCTADAGWITGHSYIFYGPLANGATTLVFEGVPTYPDAGRFWQVCEKHKVNVFYTAPTAI 359
Query: 457 KAWRNT--NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501
+A + + + D + +R + GE N + W WY ++
Sbjct: 360 RALMSIGDDLVNQADLSSLRLLGTVGEPIN--PEAW----HWYYEVV 400
|
|
| TIGR_CMR|SO_2743 SO_2743 "acetyl-coenzyme A synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 309 (113.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 107/401 (26%), Positives = 177/401 (44%)
Query: 123 LFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCL 180
++Q+ ++ +PE +W K I + P + +T H + W LN + CL
Sbjct: 27 MYQE-SIVNPEGFWREHGKRIDWI---KPYTKIKKTTFDDHNLSINWFYDGTLNASANCL 82
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239
H + VAI+W D +E +TY EL QV ANAL + +GD + I
Sbjct: 83 --DRHLAAHSDRVAIIWEGDNANEQ--RKITYGELHTQVCKFANALRSQGVRRGDIVTIY 138
Query: 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 299
MPM A + LA G V + F+ IA+R+ K+K + T D +RGGR PL
Sbjct: 139 MPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKIVITSDEGMRGGRAIPL 198
Query: 300 YSKVLGAA--P-----LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352
+ A P K IVL G + + +D+ W + + H
Sbjct: 199 KRNIDDALKHPDVTSVEKVIVLKRTGGKIDW-VEGRDVWWHSLVETASEHCAVEEMG-AE 256
Query: 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMG 411
+P+ +L++SG+TG PK + T + + ++ D K G++Y ++GW+ G
Sbjct: 257 DPLF----LLYTSGSTGNPKGVLHTTGGYMVYASMTHEYVFDYKPGEIYWCTADVGWITG 312
Query: 412 -PVILFSSFLNGATLALYQGSPLERS---FGKFVQDAGVTVLGTVPSLVKAW--RNTNCL 465
+++ NGAT+ +++G P S G+ + V +L T P+L++A
Sbjct: 313 HSYMVYGPLANGATVLIHEGVPNHPSPARLGEMIDRHKVNILYTAPTLIRALMAEGKQHF 372
Query: 466 EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII--ESC 504
+ + + +R S GE N + W WY+ +I E C
Sbjct: 373 DKYNGSSLRIMGSVGEPIN--PEAW----RWYHEVIGHEHC 407
|
|
| TIGR_CMR|SPO_1813 SPO_1813 "acetyl-coenzyme A synthetase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 307 (113.1 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 106/409 (25%), Positives = 179/409 (43%)
Query: 110 LGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVV--FREAPKCILDRTDKSKHGGTW 167
+ RA+ + T R++ ++ PE +W K + + F + + + S + W
Sbjct: 19 VARAHVNADTYDRMYAA-SMADPEGFWAEQGKRVDWIKPFTQVKDVNYNFGEVSIN---W 74
Query: 168 LPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD 227
LN+A C+ H + AI+W D E+A ++ TYKEL V +AN L+
Sbjct: 75 YADGTLNVAANCI--DRHLATRGDQTAIIWEPDSPTEAAKHI-TYKELHGSVCRMANILE 131
Query: 228 TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT 286
++ KGD + I +PM A LA G + + F+ +A R+ AK + T
Sbjct: 132 SLGVRKGDRVVIYLPMIPEAAYAMLACARIGAIHSIVFAGFSPDALAARVNGCDAKVVIT 191
Query: 287 QDFILRGGRKFPLYSKVLGAA-----PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341
D RGGRK PL S A +K +V+ G + ++D + +
Sbjct: 192 ADEAPRGGRKTPLKSNADAALLHCKDTVKCLVVKRTGGQTTW-IADRDFDYNEMALEAS- 249
Query: 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---IDLKVGD 398
+Y +P + + IL++SG+TG+PK + T + A H D GD
Sbjct: 250 ----DYCAPAEMGAEDPLFILYTSGSTGQPKGVVHTTGGYLVYAA--MTHEITFDYHDGD 303
Query: 399 VYCWPTNLGWVMG-PVILFSSFLNGATLALYQGSPLERSFGKFVQDAG---VTVLGTVPS 454
+Y ++GWV G I++ NGAT +++G P G+F + V T P+
Sbjct: 304 IYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPTYPDAGRFWEVCAKHKVNQFYTAPT 363
Query: 455 LVKAW--RNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501
++A + T+ +E D + +R + GE N + W WYN ++
Sbjct: 364 AIRALMGQGTSFVEKHDLSDLRLLGTVGEPIN--PEAW----NWYNEVV 406
|
|
| UNIPROTKB|P27550 acs [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 299 (110.3 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 100/344 (29%), Positives = 148/344 (43%)
Query: 167 WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL 226
W LN+A CL H ++ + AI+W D D S ++YKEL V AN L
Sbjct: 69 WYEDGTLNLAANCL--DRHLQENGDRTAIIWEGD--DASQSKHISYKELHRDVCRFANTL 124
Query: 227 -DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
+ KGD +AI MPM A + LA G V I F+ +A R+ S ++ +
Sbjct: 125 LELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSNSRLVI 184
Query: 286 TQDFILRGGRKFPLYSKVLGAA--PL-----KAIVLPAIGNDVGIPLREQDLSWKDFLSS 338
T D +R GR PL V A P +VL G + +DL W D +
Sbjct: 185 TSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVVVLKRTGGKIDWQ-EGRDLWWHDLVEQ 243
Query: 339 V-DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKV 396
D H N D + IL++SG+TG+PK + T + A + ++ D
Sbjct: 244 ASDQHQAEEM-----NAEDPLF-ILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHP 297
Query: 397 GDVYCWPTNLGWVMG-PVILFSSFLNGATLALYQGSP---LERSFGKFVQDAGVTVLGTV 452
GD+Y ++GWV G +L+ GAT +++G P + V V +L T
Sbjct: 298 GDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTA 357
Query: 453 PSLVKAW--RNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSK 494
P+ ++A +EG D + +R S GE N + W K
Sbjct: 358 PTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKK 401
|
|
| MGI|MGI:2685720 Acss3 "acyl-CoA synthetase short-chain family member 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 296 (109.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 110/404 (27%), Positives = 187/404 (46%)
Query: 128 TVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNH-R 186
+V PE +W A ++IS ++ K + R S +W +LNI C H
Sbjct: 64 SVADPERFWGKAAEQISW-YKPWTKTLESRYPPST---SWFVEGMLNI--CYNAIDRHIE 117
Query: 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR 245
+ + +AI++ D A ++YKE+ EQV +A L KGD + I MPM +
Sbjct: 118 NGQGDKIAIIYDSPVTDTKAT--ISYKEVLEQVSKLAGVLVKQGVKKGDTVVIYMPMIPQ 175
Query: 246 AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK---FPLYSK 302
A+ LA G + I FA++E++TR+ +K K + T F + GRK PL +
Sbjct: 176 AIYTMLACARIGAIHSLIFGGFASKELSTRIDHAKPKVVVTASFGIEPGRKVEYIPLLEE 235
Query: 303 VL--GAAPLKAIVLPAIGNDVGIPLRE-QDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVV 359
L G +++ + N +PL +DL W++ ++ H PV + + +
Sbjct: 236 ALRIGQHRPDRVLIYSRPNMEKVPLMSGRDLDWEEEMAKAQSHD----CVPVLS--EHPL 289
Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID---LKVGDVYCWPTNLGWVMG-PVIL 415
IL++SGTTG PK + + + W LK G+V+ ++LGWV+G I
Sbjct: 290 YILYTSGTTGLPKGV--VRPTGGYAVMLNWTMSSIYGLKPGEVWWAASDLGWVVGHSYIC 347
Query: 416 FSSFLNGATLALYQGSPLER----SFGKFVQDAGVTVLGTVPSLVKAWRNTN--CLEGLD 469
+ L+G T LY+G P+ ++ + + + GV L T P+ ++A R + G
Sbjct: 348 YGPLLHGNTTVLYEGKPVGTPDAGAYFRVLAEHGVAALFTAPTAIRAIRQQDPGAALGKQ 407
Query: 470 W--TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSS 511
+ T+ ++ GE +V+ W S K + +++ TE S
Sbjct: 408 YSLTRFKTLFVAGERCDVETLEW-SKKVFRVPVLDHWWQTETGS 450
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| ZFIN|ZDB-GENE-050320-139 acss1 "acyl-CoA synthetase short-chain family member 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 296 (109.3 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 105/424 (24%), Positives = 200/424 (47%)
Query: 89 SLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFR 148
SL +S ++ L H L GR Y D L++ +V+ PE +W KE + +
Sbjct: 40 SLSRSSISAAQLDLSSH---LSGRNYAD------LYE-LSVKDPENFWGSIAKE-RLAWT 88
Query: 149 EAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVN 208
+ + D D S W G LN++ CL H + + VA++W +D +
Sbjct: 89 KPFDQVSD-CDISSGKINWFLGGQLNVSVNCL--DVHVANDPSRVALIWEKD--EPGTEE 143
Query: 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSF 267
+TY+EL E +AN L + +G+ +AI MP++ AV LA G V + F
Sbjct: 144 RITYRELLEMTCRLANTLKSHGVQRGERVAIYMPVSPMAVAAMLACARIGAVHTVVFAGF 203
Query: 268 AAREIATRLRVSKAKGIFTQDFILRGGRKFPLYS---KVLGAAPLKAIVLPAIGNDVGIP 324
++ +A R++ ++ K + T + +RGGR F L S K + + P V A + +P
Sbjct: 204 SSEALAGRIQDAQCKFVITCNQGVRGGRVFDLKSTVDKAVKSCPSVRHVFVAKRTNNSVP 263
Query: 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC 384
+ + D+ ++ ++ P P+ + + ++ +L++SG+TG+PK I TQ +
Sbjct: 264 MGKLDIPLEEVMAGQSSECAPE---PMES--EEMLFMLYTSGSTGKPKGIVHTQAGYLLY 318
Query: 385 TAEGWAHI-DLKVGDVYCWPTNLGWVMG-PVILFSSFLNGATLALYQGSPLERSFGKF-- 440
+ ++ D GDV+ ++GW+ G +++ NGAT L++ +P+ + G++
Sbjct: 319 ASLTHQYVFDYTPGDVFGCVADIGWITGHSYVVYGPLCNGATSVLFESTPVYPNPGRYWE 378
Query: 441 -VQDAGVTVLGTVPSLVKAWRN--TNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497
VQ + P+ ++ + ++ D + +++ AS GE N + W W+
Sbjct: 379 TVQRLRINQFYGAPTAIRLLLKYEESWVKKYDRSSLKTLASVGEPIN--HEAW----DWF 432
Query: 498 NAII 501
+ ++
Sbjct: 433 HNVV 436
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q84P17 | AEE18_ARATH | 6, ., 2, ., 1, ., - | 0.6882 | 0.9847 | 0.8019 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.2.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00024773001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (727 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 592 | |||
| PLN03052 | 728 | PLN03052, PLN03052, acetate--CoA ligase; Provision | 0.0 | |
| PLN03051 | 499 | PLN03051, PLN03051, acyl-activating enzyme; Provis | 0.0 | |
| cd05968 | 474 | cd05968, AACS_like, Uncharacterized acyl-CoA synth | 8e-49 | |
| COG0365 | 528 | COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat | 1e-48 | |
| cd05943 | 616 | cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac | 7e-43 | |
| PRK03584 | 655 | PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr | 9e-40 | |
| pfam00501 | 412 | pfam00501, AMP-binding, AMP-binding enzyme | 3e-37 | |
| TIGR01217 | 652 | TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase | 8e-32 | |
| TIGR02188 | 625 | TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase | 6e-30 | |
| COG0318 | 534 | COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ | 6e-29 | |
| cd05966 | 602 | cd05966, ACS, Acetyl-CoA synthetase (also known as | 2e-27 | |
| cd05967 | 607 | cd05967, PrpE, Propionyl-CoA synthetase (PrpE) | 1e-26 | |
| PRK00174 | 637 | PRK00174, PRK00174, acetyl-CoA synthetase; Provisi | 2e-25 | |
| PLN02654 | 666 | PLN02654, PLN02654, acetate-CoA ligase | 2e-20 | |
| PRK07656 | 513 | PRK07656, PRK07656, long-chain-fatty-acid--CoA lig | 4e-20 | |
| TIGR02316 | 628 | TIGR02316, propion_prpE, propionate--CoA ligase | 9e-19 | |
| cd05911 | 487 | cd05911, Firefly_Luc_like, Firefly luciferase of l | 3e-18 | |
| cd04433 | 338 | cd04433, AFD_class_I, Adenylate forming domain, Cl | 3e-18 | |
| PRK04319 | 570 | PRK04319, PRK04319, acetyl-CoA synthetase; Provisi | 3e-16 | |
| cd05904 | 504 | cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) | 4e-15 | |
| cd05936 | 468 | cd05936, FC-FACS_FadD_like, Prokaryotic long-chain | 3e-14 | |
| cd05909 | 489 | cd05909, AAS_C, C-terminal domain of the acyl-acyl | 5e-14 | |
| TIGR01733 | 409 | TIGR01733, AA-adenyl-dom, amino acid adenylation d | 2e-13 | |
| PRK07638 | 487 | PRK07638, PRK07638, acyl-CoA synthetase; Validated | 2e-13 | |
| PRK10524 | 629 | PRK10524, prpE, propionyl-CoA synthetase; Provisio | 2e-13 | |
| cd05920 | 483 | cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l | 3e-12 | |
| COG1022 | 613 | COG1022, FAA1, Long-chain acyl-CoA synthetases (AM | 5e-12 | |
| cd05903 | 437 | cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li | 7e-11 | |
| cd12118 | 520 | cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt | 2e-10 | |
| PRK08316 | 523 | PRK08316, PRK08316, acyl-CoA synthetase; Validated | 2e-09 | |
| cd12117 | 474 | cd12117, A_NRPS_Srf_like, The adenylation domain o | 2e-08 | |
| PRK06710 | 563 | PRK06710, PRK06710, long-chain-fatty-acid--CoA lig | 3e-08 | |
| COG1020 | 642 | COG1020, EntF, Non-ribosomal peptide synthetase mo | 5e-08 | |
| PRK06187 | 521 | PRK06187, PRK06187, long-chain-fatty-acid--CoA lig | 1e-07 | |
| TIGR01923 | 436 | TIGR01923, menE, O-succinylbenzoate-CoA ligase | 1e-07 | |
| PRK06178 | 567 | PRK06178, PRK06178, acyl-CoA synthetase; Validated | 3e-07 | |
| cd05969 | 443 | cd05969, MACS_like_4, Uncharacterized subfamily of | 3e-07 | |
| cd05907 | 456 | cd05907, VL_LC_FACS_like, Long-chain fatty acid Co | 5e-07 | |
| cd12119 | 517 | cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth | 7e-07 | |
| TIGR03098 | 517 | TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form | 7e-07 | |
| PTZ00237 | 647 | PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi | 8e-07 | |
| PRK07529 | 632 | PRK07529, PRK07529, AMP-binding domain protein; Va | 8e-07 | |
| PLN02246 | 537 | PLN02246, PLN02246, 4-coumarate--CoA ligase | 9e-07 | |
| cd05973 | 440 | cd05973, MACS_like_2, Uncharacterized subfamily of | 1e-06 | |
| cd05918 | 447 | cd05918, A_NRPS_SidN3_like, The adenylation (A) do | 1e-06 | |
| PRK07059 | 557 | PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig | 2e-06 | |
| cd05958 | 487 | cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) | 2e-06 | |
| cd05973 | 440 | cd05973, MACS_like_2, Uncharacterized subfamily of | 3e-06 | |
| cd12114 | 476 | cd12114, A_NRPS_TlmIV_like, The adenylation domain | 4e-06 | |
| PRK08314 | 546 | PRK08314, PRK08314, long-chain-fatty-acid--CoA lig | 4e-06 | |
| cd05945 | 447 | cd05945, DltA, D-alanine:D-alanyl carrier protein | 5e-06 | |
| cd05928 | 530 | cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co | 6e-06 | |
| PRK06087 | 547 | PRK06087, PRK06087, short chain acyl-CoA synthetas | 8e-06 | |
| PRK06839 | 496 | PRK06839, PRK06839, acyl-CoA synthetase; Validated | 1e-05 | |
| cd05974 | 433 | cd05974, MACS_like_1, Uncharacterized subfamily of | 2e-05 | |
| TIGR02262 | 508 | TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil | 2e-05 | |
| cd05972 | 430 | cd05972, MACS_like, Medium-chain acyl-CoA syntheta | 2e-05 | |
| PRK12583 | 558 | PRK12583, PRK12583, acyl-CoA synthetase; Provision | 2e-05 | |
| cd05917 | 347 | cd05917, FACL_like_2, Uncharacterized subfamily of | 4e-05 | |
| TIGR03208 | 538 | TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate | 5e-05 | |
| PRK07786 | 542 | PRK07786, PRK07786, long-chain-fatty-acid--CoA lig | 6e-05 | |
| cd05959 | 506 | cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and | 7e-05 | |
| PLN02574 | 560 | PLN02574, PLN02574, 4-coumarate--CoA ligase-like | 8e-05 | |
| PRK07788 | 549 | PRK07788, PRK07788, acyl-CoA synthetase; Validated | 9e-05 | |
| PRK08276 | 502 | PRK08276, PRK08276, long-chain-fatty-acid--CoA lig | 1e-04 | |
| PRK12582 | 624 | PRK12582, PRK12582, acyl-CoA synthetase; Provision | 1e-04 | |
| PRK13295 | 547 | PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig | 1e-04 | |
| cd05930 | 445 | cd05930, A_NRPS, The adenylation domain of nonribo | 2e-04 | |
| cd05932 | 504 | cd05932, LC_FACS_bac, Bacterial long-chain fatty a | 3e-04 | |
| PRK07798 | 533 | PRK07798, PRK07798, acyl-CoA synthetase; Validated | 3e-04 | |
| PRK12467 | 3956 | PRK12467, PRK12467, peptide synthase; Provisional | 3e-04 | |
| cd05972 | 430 | cd05972, MACS_like, Medium-chain acyl-CoA syntheta | 4e-04 | |
| PRK12467 | 3956 | PRK12467, PRK12467, peptide synthase; Provisional | 4e-04 | |
| cd05919 | 436 | cd05919, BCL_like, Benzoate CoA ligase (BCL) and s | 4e-04 | |
| PRK06334 | 539 | PRK06334, PRK06334, long chain fatty acid--[acyl-c | 4e-04 | |
| PRK08008 | 517 | PRK08008, caiC, putative crotonobetaine/carnitine- | 5e-04 | |
| cd05941 | 430 | cd05941, MCS, Malonyl-CoA synthetase (MCS) | 6e-04 | |
| cd05929 | 342 | cd05929, BACL_like, Bacterial Bile acid CoA ligase | 6e-04 | |
| PLN02330 | 546 | PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 | 8e-04 | |
| cd05923 | 495 | cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) | 8e-04 | |
| cd05930 | 445 | cd05930, A_NRPS, The adenylation domain of nonribo | 0.001 | |
| PRK08180 | 614 | PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe | 0.001 | |
| cd05934 | 421 | cd05934, FACL_DitJ_like, Uncharacterized subfamily | 0.002 | |
| cd05921 | 559 | cd05921, FCS, Feruloyl-CoA synthetase (FCS) | 0.002 | |
| PRK05605 | 573 | PRK05605, PRK05605, long-chain-fatty-acid--CoA lig | 0.002 | |
| cd05935 | 430 | cd05935, LC_FACS_like, Putative long-chain fatty a | 0.002 | |
| PRK05852 | 534 | PRK05852, PRK05852, acyl-CoA synthetase; Validated | 0.002 | |
| PRK04813 | 503 | PRK04813, PRK04813, D-alanine--poly(phosphoribitol | 0.003 | |
| PRK12406 | 509 | PRK12406, PRK12406, long-chain-fatty-acid--CoA lig | 0.003 | |
| PLN03102 | 579 | PLN03102, PLN03102, acyl-activating enzyme; Provis | 0.003 | |
| cd05934 | 421 | cd05934, FACL_DitJ_like, Uncharacterized subfamily | 0.004 | |
| cd05912 | 407 | cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase | 0.004 | |
| cd05970 | 537 | cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s | 0.004 |
| >gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional | Back alignment and domain information |
|---|
Score = 1005 bits (2600), Expect = 0.0
Identities = 356/590 (60%), Positives = 435/590 (73%), Gaps = 5/590 (0%)
Query: 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHP 60
GK++ E+ V DL GL EEAE+F K L+ +++ + G IWR +++ +L P HP
Sbjct: 4 AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRA-GASPPSIWRR-ISQSLLTPSHP 61
Query: 61 HGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITS 120
LHQL+YYS Y +WD+ GPP WFPS + +KLTNLG LE G +LLG YKDPI+S
Sbjct: 62 FALHQLMYYSCYKNWDSDTLGPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISS 121
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL 180
F FQ+F+VE+PE YW I L E+S+VF P+CILD +D+S GG WLPG+VLN+AECCL
Sbjct: 122 FSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDESNPGGQWLPGAVLNVAECCL 181
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239
P + D+++AI+WR++ D+ VN MT ELR QV VANALD + F KGDAIAID
Sbjct: 182 TPKPSKT--DDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239
Query: 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 299
MPM V AVIIYLAIILAG VVVSIADSFA EIATRL++SKAK IFTQD I+RGG+ PL
Sbjct: 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPL 299
Query: 300 YSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVV 359
YS+V+ A KAIVLPA G V + LRE D+SW DFL+ + RP+ Y V PV+A
Sbjct: 300 YSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFT 359
Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419
NILFSSGTTGEPKAIPWTQL+ +R A+ WAH+D++ GD+ CWPTNLGW+MGP ++++S
Sbjct: 360 NILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASL 419
Query: 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
LNGATLALY GSPL R F KFVQDA VT+LGTVPS+VK W+NTNC+ GLDW+ IR F ST
Sbjct: 420 LNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479
Query: 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL 539
GE S+VDD LWL S+A Y IIE CGGTEL ++ GSLLQPQAF AFST M L IL
Sbjct: 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFIL 539
Query: 540 DECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMV 589
D+ G PYPDD PC GE+ LFPL GAS LLNADH +VYF+GMP++ G +
Sbjct: 540 DDSGNPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKI 589
|
Length = 728 |
| >gnl|CDD|215552 PLN03051, PLN03051, acyl-activating enzyme; Provisional | Back alignment and domain information |
|---|
Score = 606 bits (1565), Expect = 0.0
Identities = 249/356 (69%), Positives = 292/356 (82%), Gaps = 7/356 (1%)
Query: 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 299
MPMTV AVIIYLAI+LAG VVVS+ADSF+A+EIATRL +S AKG+FTQD +LRGGR PL
Sbjct: 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPL 60
Query: 300 YSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFL--SSVDYHPRPNYYSPVYNPVDA 357
YSKV+ AAP KAIVLPA G V +PLREQDLSW DFL ++ N YSPVY PV++
Sbjct: 61 YSKVVEAAPAKAIVLPAAGEPVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVES 120
Query: 358 VVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417
V NILFSSGTTGEPKAIPWT LS +RC ++GWAH+D++ GDV CWPTNLGW+MGP +L+S
Sbjct: 121 VTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPGDVVCWPTNLGWMMGPWLLYS 180
Query: 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRS 475
+FLNGATLALY G+PL R FGKFVQDAGVTVLG VPS+VKAWR+T +EGLDW+K+R
Sbjct: 181 AFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRV 240
Query: 476 FASTGETSNVDDDLWLSS-KAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA 534
FASTGE S VDD LWLSS + +Y +IE CGGTEL+S YI +LLQPQA GAFSTA++
Sbjct: 241 FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGT 300
Query: 535 GLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMY--KGM 588
V+L++ GVPYPDDQPCVGEV L P LGASDRLLNADH++VY++GMPMY KGM
Sbjct: 301 RFVLLNDNGVPYPDDQPCVGEVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGM 356
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Length = 499 |
| >gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 8e-49
Identities = 101/362 (27%), Positives = 156/362 (43%), Gaps = 67/362 (18%)
Query: 203 DESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVV 261
++ +V TY EL +V +A+ L + KGD + I MPM AV+ LAI G + V
Sbjct: 1 EDGSVRTWTYSELAREVNRLASGLAALGLGKGDRVGIYMPMIPEAVVALLAIAKIGAIAV 60
Query: 262 SIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDV 321
I F +ATRL+ ++AK + T D LR G++
Sbjct: 61 PIFSGFGPDAVATRLQDAEAKVLITADGFLRRGKR------------------------- 95
Query: 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSS 381
+ L++ I+++SGTTG+PK T
Sbjct: 96 -VDLKDDPAM-----------------------------IIYTSGTTGKPKGTVHTHAGF 125
Query: 382 -IRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSF 437
++ + DLK GD W T++GW+MGP ++ L GAT+ LY+G+ P
Sbjct: 126 PVKAAKDIGFCFDLKPGDRLLWITDMGWMMGPWLVLGGLLLGATIVLYEGAPDYPDPDRL 185
Query: 438 GKFVQDAGVTVLGTVPSLVKAWR--NTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSK- 494
+ V+ VT LG P+L++A R +EG D + +R STGE + + LWL +
Sbjct: 186 WRIVERHKVTHLGLSPTLIRALRAHGDAPVEGHDLSSLRVLGSTGEPWDPESWLWLFERV 245
Query: 495 -AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCV 553
II GGTE+S + ++P +F+ + ++DE G P V
Sbjct: 246 GGGRAPIINYSGGTEISGGILGNVPIRPIKPCSFNGPSPGMDADVVDEDGRPVR---GEV 302
Query: 554 GE 555
GE
Sbjct: 303 GE 304
|
This uncharacterized acyl-CoA synthetase family is highly homologous to acetoacetyl-CoA synthetase. However, the proteins in this family exist in only bacteria and archaea. AACS is a cytosolic ligase that specifically activates acetoacetate to its coenzyme A ester by a two-step reaction. Acetoacetate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is the first step of the mevalonate pathway of isoprenoid biosynthesis via isopentenyl diphosphate. Isoprenoids are a large class of compounds found in all living organisms. Length = 474 |
| >gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 1e-48
Identities = 108/436 (24%), Positives = 169/436 (38%), Gaps = 55/436 (12%)
Query: 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANA 225
W G LN+A L + AI++ + +TY +LR +V +ANA
Sbjct: 1 KWFEGGTLNLALNALDRHL-EADRPDDTAIIFDGEDGLFRE---LTYGDLRREVARLANA 56
Query: 226 L-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGI 284
L D KGD +AI MP + AVI LA G + ++ +A +A R+ K +
Sbjct: 57 LKDLGGVKGDRVAIYMPNSPEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVL 116
Query: 285 FTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344
D R G++ L +V L + + +
Sbjct: 117 IADDGTFRNGKEIALLEDADAVLSSVVVV------------PRLGLWYDEAVEKASEK-- 162
Query: 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ---LSSIRCTAEGWAHIDLKVGDVYC 401
+ P D + +L++SGTTG+PK I + L R TA+ H DL GD +
Sbjct: 163 ---FEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAK--FHGDLLPGDRFW 217
Query: 402 WPTNLGWVMGPV-ILFSSFLNGATLALYQGSPLE--RSFGKFVQDAGVTVLGTVPSLVKA 458
++ GW+ G +FS +GAT LY G P + ++ VT+ GT P+ ++
Sbjct: 218 NSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRR 277
Query: 459 WRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA----IIESCGGTELSSAYI 514
E D + +R S GE N + W +Y+A I++ G TE +I
Sbjct: 278 LMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEW-----FYSALGVWILDIYGQTETGMGFI 332
Query: 515 QG--SLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEV-------GLFPLYLGA 565
G + + + +D+ G P P P VGE+ G+ Y
Sbjct: 333 AGRPPVKNGSSGLPLPGYAV----RRVDDEGNPVP---PGVGELVVRLPWPGMALTYWND 385
Query: 566 SDRLLNADHEEVYFRG 581
+R A Y G
Sbjct: 386 PERYKEAYFGRWYRTG 401
|
Length = 528 |
| >gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 7e-43
Identities = 119/465 (25%), Positives = 187/465 (40%), Gaps = 55/465 (11%)
Query: 117 PITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIA 176
+ + +++VE A+WE V+ + +LD G W PG+ LN A
Sbjct: 4 SLADYHALWRWSVEDLAAFWESVWDFFDVIGSKGYVVVLDGDIMP--GARWFPGARLNYA 61
Query: 177 ECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDA 235
E L R +++ AI + + +++ ELR QV +A AL + GD
Sbjct: 62 ENLL-----RHADNDPAAIYAAGE---DGERREISWAELRSQVARLAAALRDLGVKPGDR 113
Query: 236 IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 295
+A +P AVI LA G + S + F + R + K +F D + G+
Sbjct: 114 VAGYLPNVPEAVIAMLATASIGAIWSSCSPDFGVEAVLDRFGQIEPKVLFAVDGYVYNGK 173
Query: 296 KFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351
+ K+ L+A+V+ + P + + S P + +
Sbjct: 174 EHDRREKIAEIVKGLPSLEAVVVVPYLSSDAQPAALKFSALTLLWSLAGDRAAPLEFERL 233
Query: 352 YNPVDAVVNILFSSGTTGEPKAIPWTQ----LSSIRCTAEGWAHIDLKVGDVYCWPTNLG 407
P D + IL+SSGTTG PK I L ++ E H DL+ GD + T G
Sbjct: 234 --PFDHPLWILYSSGTTGLPKCIVHGAGGTLLQHLK---EHGLHCDLRPGDRLFYYTTTG 288
Query: 408 WVMGPVILFSSFLNGATLALYQGSPL---ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC 464
W+M L S L+GATL LY GSPL + G+T+ GT + A
Sbjct: 289 WMMWN-WLVSGLLSGATLVLYDGSPLYPDPDVLWRLAAKLGITIFGTSAKYLDALEKAGI 347
Query: 465 --LEGLDWTKIRSFASTG-----ET-----SNVDDDLWLSSKAWYNAIIESCGGTELSSA 512
D + +R+ STG E S+V D+WL+S + GGT++
Sbjct: 348 EPGRTHDLSSLRTILSTGSPLPPEGFDWVYSHVKSDVWLASIS---------GGTDICGC 398
Query: 513 YIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVG 557
++ G+ P G + + DE + +P +GEVG
Sbjct: 399 FVGGNPTLPVYRGEIQCRGLGMAVEAFDE------EGKPVIGEVG 437
|
AACS is a cytosolic ligase that specifically activates acetoacetate to its coenzyme A ester by a two-step reaction. Acetoacetate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is the first step of the mevalonate pathway of isoprenoid biosynthesis via isopentenyl diphosphate. Isoprenoids are a large class of compounds found in all living organisms. AACS is widely distributed in bacteria, archaea and eukaryotes. In bacteria, AACS is known to exhibit an important role in the metabolism of poly-b-hydroxybutyrate, an intracellular reserve of organic carbon and chemical energy by some microorganisms. In mammals, AACS influences the rate of ketone body utilization for the formation of physiologically important fatty acids and cholesterol. Length = 616 |
| >gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (390), Expect = 9e-40
Identities = 140/512 (27%), Positives = 202/512 (39%), Gaps = 84/512 (16%)
Query: 81 GPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIAL 140
G PL W PS ++ + + + L + +++VE EA+W+
Sbjct: 2 GDPL-WTPSAERIAASRMTAFIR-----WLAARRGLSFDDYAALWRWSVEDLEAFWQSVW 55
Query: 141 KEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIV-WRE 199
V+ +L + G W PG+ LN AE L R + D+ AI+ E
Sbjct: 56 DFFGVIGSTPYTVVLA--GRRMPGARWFPGARLNYAENLL-----RHRRDDRPAIIFRGE 108
Query: 200 DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGY 258
D +++ ELR QV +A AL + GD +A +P V+ LA G
Sbjct: 109 DGPRRE----LSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGA 164
Query: 259 VVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV---LGAAP--LKAIV 313
+ S + F + + R + K + D GG+ F +KV A P +V
Sbjct: 165 IWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVV 224
Query: 314 LPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKA 373
+P +G L W+DFL+ + PV P D + IL+SSGTTG PK
Sbjct: 225 VPYLGPAAAAAALPGALLWEDFLA--PAEAAELEFEPV--PFDHPLWILYSSGTTGLPKC 280
Query: 374 IP-------WTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLA 426
I L + H DL GD + W T GW+M L S L GATL
Sbjct: 281 IVHGHGGILLEHLKELGL------HCDLGPGDRFFWYTTCGWMMWN-WLVSGLLVGATLV 333
Query: 427 LYQGSP----LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-------EGLDWTKIRS 475
LY GSP + + GVTV GT + A C E D + +R+
Sbjct: 334 LYDGSPFYPDPNVLW-DLAAEEGVTVFGTSAKYLDA-----CEKAGLVPGETHDLSALRT 387
Query: 476 FASTGE----------TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFG 525
STG +V D+WL+S I GGT++ S ++ G+ L P G
Sbjct: 388 IGSTGSPLPPEGFDWVYEHVKADVWLAS------I---SGGTDICSCFVGGNPLLPVYRG 438
Query: 526 AFSTATMTAGLVILDECGVPYPDDQPCVGEVG 557
+ + DE G +P VGEVG
Sbjct: 439 EIQCRGLGMAVEAWDEDG------RPVVGEVG 464
|
Length = 655 |
| >gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 3e-37
Identities = 82/351 (23%), Positives = 130/351 (37%), Gaps = 26/351 (7%)
Query: 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
TY+EL E+ +A AL + GD +AI +P + V+ LA++ AG V + S A
Sbjct: 1 TYRELDERANRLAAALRALGVGPGDRVAILLPNSPEWVVAILAVLKAGAAYVPLDPSLPA 60
Query: 270 REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQD 329
+A L S+AK + T D L K+L ++L I +
Sbjct: 61 ERLAYILEDSEAKVLITDD---------ELLPKLLEVLLKLLVLLALIIVGDDGEGLDLL 111
Query: 330 LSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 389
+S + P D + I+++SGTTG+PK + T + + A
Sbjct: 112 DDELLAGASAEPPAPPV-------DPDDLAYIIYTSGTTGKPKGVMLTHRNLLALAAGLA 164
Query: 390 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLE-RSFGKFVQDAGVTV 448
L GD L + +F L G TL L L+ ++ VTV
Sbjct: 165 ERFGLTPGDRVLLLLPLHFDGSVWEIFGPLLAGGTLVLVPKFTLDPARLLDLIEKYKVTV 224
Query: 449 LGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508
L VP+L++ + D + +R S GE + L + ++ G TE
Sbjct: 225 LYGVPTLLRLLLKAPEEKKYDLSSLRLVLSGGEPLPPELLRRLRERFGGVPLVNGYGPTE 284
Query: 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPC-VGEVG 557
+ G + G + E V + +P GEVG
Sbjct: 285 TTVVATA------NLPGDPEVKPGSIGRPLPGVEVKVLDEEGEPVPPGEVG 329
|
Length = 412 |
| >gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 8e-32
Identities = 123/453 (27%), Positives = 186/453 (41%), Gaps = 46/453 (10%)
Query: 124 FQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPS 183
+++V+ + +W+ + V F ++D D++ G W PG+ LN AE
Sbjct: 40 LHRWSVDELDTFWKAVWEWFDVRFSTPCARVVD--DRTMPGAQWFPGARLNYAE------ 91
Query: 184 NHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM 242
N R A+++ D E A +T+ ELR QV +A AL + GD ++ +P
Sbjct: 92 NLLRAAGTEPALLYV-DETHEPAP--VTWAELRRQVASLAAALRALGVRPGDRVSGYLPN 148
Query: 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSK 302
+AV+ LA G + S + F AR + R + + K +FT D G++ K
Sbjct: 149 IPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDK 208
Query: 303 VL----GAAPLKAIVL-PAIGNDVGI-PLREQDLSWKDFLSSVDYHPRPNYYSPVYN--P 354
V L+A+V P +G P + L +DF ++ V+ P
Sbjct: 209 VAEVRKELPTLRAVVHIPYLGPRETEAPKIDGALDLEDFTAAAQAAE------LVFEQLP 262
Query: 355 VDAVVNILFSSGTTGEPKAIPWTQLSS-IRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV 413
D + ILFSSGTTG PK I + + ++ E H DL GD + T GW+M
Sbjct: 263 FDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMWN- 321
Query: 414 ILFSSFLNGATLALYQGSPL---ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGL 468
L S GATL LY GSP + G T+ GT V A R
Sbjct: 322 WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTH 381
Query: 469 DWTKIRSFASTGETSNVDDDLWL----SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAF 524
D + ++ ASTG D W+ + W +I GGT++ S + + P
Sbjct: 382 DLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASI---SGGTDICSCFAGANPTLPVHI 438
Query: 525 GAFSTATMTAGLVILDECGVPYPDDQPCVGEVG 557
G + + D G +P GEVG
Sbjct: 439 GEIQAPGLGTAVQSWDPEG------KPVTGEVG 465
|
This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway [Central intermediary metabolism, Other]. Length = 652 |
| >gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 6e-30
Identities = 136/522 (26%), Positives = 223/522 (42%), Gaps = 100/522 (19%)
Query: 118 ITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPK-CILDRTDKSKHGGTWLPGSVLNIA 176
+ ++ + ++E P+ +W +E+ F+ K K W G LN++
Sbjct: 4 LEQYKELYEESIEDPDKFWAKLARELLDWFKPFTKVLDWSFPPFYK----WFVGGELNVS 59
Query: 177 ECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDA 235
C+ H + VAI+W D + V +TY+EL +V AN L ++ KGD
Sbjct: 60 YNCV--DRHLEARPDKVAIIWEGD--EPGEVRKITYRELHREVCRFANVLKSLGVKKGDR 115
Query: 236 IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 295
+AI MPM A I LA G + + F+A +A R+ + AK + T D LRGG+
Sbjct: 116 VAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGK 175
Query: 296 KFPLYSKV---LGAAPL---KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYS 349
PL + V L P+ +V+ GN V + +D+ W D ++ Y
Sbjct: 176 VIPLKAIVDEALEKCPVSVEHVLVVRRTGNPV-PWVEGRDVWWHDLMAKA-----SAYCE 229
Query: 350 PVYNPVDA--VVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHI------DLKVGD 398
P P+D+ + IL++SG+TG+PK + + T G +A + D+K GD
Sbjct: 230 P--EPMDSEDPLFILYTSGSTGKPKGV-------LHTTG-GYLLYAAMTMKYVFDIKDGD 279
Query: 399 VYCWPT-NLGWVMG-PVILFSSFLNGATLALYQGSPLERSFGKF---VQDAGVTVLGTVP 453
++ W T ++GW+ G I++ NGAT +++G+P G+F ++ VT+ T P
Sbjct: 280 IF-WCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAP 338
Query: 454 SLVKAWRNTNCLEGLDWTK------IRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507
+ ++A G +W K +R S GE N + W+ WY ++ G
Sbjct: 339 TAIRALMR----LGDEWVKKHDLSSLRLLGSVGEPIN--PEAWM----WYYKVV---GKE 385
Query: 508 E--LSSAYIQ---GSLLQPQAFGAFSTATMTAGL-------VILDECGVPYPDDQPCVGE 555
+ + Q G ++ GA T +A L ++DE G + GE
Sbjct: 386 RCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEG----NPVEGPGE 441
Query: 556 VGLFPLYLGASD------RLLNADHE---EVYFRGMPMYKGM 588
G YL R + DHE + YF + G
Sbjct: 442 GG----YLVIKQPWPGMLRTIYGDHERFVDTYF---SPFPGY 476
|
This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by pfam00501. Length = 625 |
| >gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 6e-29
Identities = 79/322 (24%), Positives = 123/322 (38%), Gaps = 21/322 (6%)
Query: 210 MTYKELREQVMLVANALDTMF-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY+EL + +A AL + GD +AI +P + +I +LA + AG V V +
Sbjct: 39 LTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLNPRLT 98
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
RE+A L + AK + T L V A P+ +VL D +P+ +
Sbjct: 99 PRELAYILNDAGAKVLITSA------EFAALLEAVAEALPVVLVVLLVGDADDRLPITLE 152
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-- 386
L P P+ + +P D +L++SGTTG PK + T + + A
Sbjct: 153 AL--------AAEGPGPDADARPVDPDDLAF-LLYTSGTTGLPKGVVLTHRNLLANAAGI 203
Query: 387 EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLE-RSFGKFVQDA 444
L DV L + G V L + L G TL L P + ++
Sbjct: 204 AAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKY 263
Query: 445 GVTVLGTVPSLVKAWRNT-NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503
VTVL VP+ ++ + + + +R S G + + AI+E
Sbjct: 264 KVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEG 323
Query: 504 CGGTELSSAYIQGSLLQPQAFG 525
G TE S A
Sbjct: 324 YGLTETSPVVTINPPDDLLAKP 345
|
Length = 534 |
| >gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) | Back alignment and domain information |
|---|
Score = 116 bits (294), Expect = 2e-27
Identities = 111/368 (30%), Positives = 169/368 (45%), Gaps = 72/368 (19%)
Query: 126 KFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCL---LP 182
K ++E PE +W +E+ F+ K +LD + W G LN + CL L
Sbjct: 2 KESIEDPEEFWAEQAEELDW-FKPWDK-VLD--WSNPPFAKWFVGGKLNASYNCLDRHLK 57
Query: 183 SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMF-SKGDAIAIDMP 241
+ N VAI+W + DES +TY+EL +V AN L ++ KGD +AI MP
Sbjct: 58 AGRG----NKVAIIWEGEPGDESRT--ITYRELYREVCRFANVLKSLGVKKGDRVAIYMP 111
Query: 242 MTVRAVIIYLA---------IILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILR 292
M I LA ++ AG F+A +A R+ +K+K + T D R
Sbjct: 112 MIPELPIAMLACARIGAIHSVVFAG---------FSAEALADRINDAKSKLLITADGGYR 162
Query: 293 GGRKFPLYSKV---LGAAPL--KAIVLPAIGNDVGIPLRE-QDLSWKDFLSSVDYHPRPN 346
GG+ PL V L P K IV+ G +V P+ E +D+ W D ++
Sbjct: 163 GGKVIPLKEIVDEALEKCPSVEKVIVVKRTGGEV--PMVEGRDVWWHDLMAKA-----SP 215
Query: 347 YYSPVYNPVDA--VVNILFSSGTTGEPKAIPWTQ---LSSIRCTAEGWAH------IDLK 395
Y P P+DA + IL++SG+TG+PK + T L +A D+
Sbjct: 216 YCEPE--PMDAEDPLFILYTSGSTGKPKGVVHTTGGYLV--------YAATTFKYVFDIH 265
Query: 396 VGDVYCWPT-NLGWVMG-PVILFSSFLNGATLALYQGSPLERSFGKF---VQDAGVTVLG 450
DVY W T ++GW+ G I++ NGAT +Y+G+P G++ V+ VT+
Sbjct: 266 PDDVY-WCTADIGWITGHSYIVYGPLANGATTVMYEGAPDYPDPGRWWEIVEKYKVTIFY 324
Query: 451 TVPSLVKA 458
T P+ ++
Sbjct: 325 TAPTAIRM 332
|
Acetyl-CoA synthetase (ACS) catalyzes the formation of acetyl-CoA from acetate, CoA, and ATP. Synthesis of acetyl-CoA is carried out in a two-step reaction. In the first step, the enzyme catalyzes the synthesis of acetyl-AMP intermediate from acetate and ATP. In the second step, acetyl-AMP reacts with CoA to produce acetyl-CoA. This enzyme is widely present in all living organisms. The activity of this enzyme is crucial for maintaining the required levels of acetyl-CoA, a key intermediate in many important biosynthetic and catabolic processes. Acetyl-CoA is used in the biosynthesis of glucose, fatty acids, and cholesterol. It can also be used in the production of energy in the citric acid cycle. Eukaryotes typically have two isoforms of acetyl-CoA synthetase, a cytosolic form involved in biosynthetic processes and a mitochondrial form primarily involved in energy generation. Length = 602 |
| >gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 1e-26
Identities = 101/358 (28%), Positives = 168/358 (46%), Gaps = 55/358 (15%)
Query: 130 EHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKE 189
+ PEA+W I + + + +LD ++ W G LN+ + R E
Sbjct: 1 KEPEAFWAEQANLID--WYKPWEKVLDNSNPPFT--RWFVGGRLNLCYNAV----DRHIE 52
Query: 190 D---NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR 245
D + +A+++ D TY EL ++V +A L + KGD + I MPM
Sbjct: 53 DGRGDQIALIY--DSPVTGTKRTYTYAELYDEVSRLAGVLRKLGVVKGDRVIIYMPMIPE 110
Query: 246 AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG 305
AVI LA G + + FA++E+A+R+ +K K I T F + GR P Y +L
Sbjct: 111 AVIAMLACARIGAIHSVVFGGFASKELASRIDDAKPKLIVTASFGIEPGRVVP-YKPLLD 169
Query: 306 AA-------PLKAIVLPAIGNDVGIPLR-EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDA 357
A P K ++L V PL+ +DL W + ++ V PV++
Sbjct: 170 KALELSQHKPHKVLILNR--GQVPAPLKPGRDLDWAELMAKARPVD------CV--PVES 219
Query: 358 V--VNILFSSGTTGEPKAIPWTQLSSIR-----CTAEGWA--HI-DLKVGDVYCWPTNLG 407
+ IL++SGTTG+PK + +R A W+ +I +K GDV+ +++G
Sbjct: 220 TDPLYILYTSGTTGKPKGV-------VRDTGGYAVALKWSMRNIYGIKPGDVFWAASDVG 272
Query: 408 WVMG-PVILFSSFLNGATLALYQGSPLER----SFGKFVQDAGVTVLGTVPSLVKAWR 460
WV+G I++ L+GAT LY+G P+ ++ + +++ GV L T P+ ++A R
Sbjct: 273 WVVGHSYIVYGPLLHGATTVLYEGKPVGTPDAGAYWRVIEEYGVNALFTAPTAIRAIR 330
|
PrpE catalyzes the first step of the 2-methylcitric acid cycle for propionate catabolism. It activates propionate to propionyl-CoA in a two-step reaction, which proceeds through a propionyl-AMP intermediate and requires ATP and Mg2+. In Salmonella enterica, the PrpE protein is required for growth of S. enterica on propionate and can substitute for the acetyl-CoA synthetase (Acs) enzyme during growth on acetate. PrpE can also activate acetate, 3HP, and butyrate to their corresponding CoA-thioesters, although with less efficiency. Length = 607 |
| >gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 2e-25
Identities = 115/387 (29%), Positives = 170/387 (43%), Gaps = 85/387 (21%)
Query: 112 RAYKDPITSFRLFQKFTVEHPEAYW-EIALKEIS------VVFREAPKCILDRTDKSKHG 164
A D L+Q+ +VE PE +W E A K + V I
Sbjct: 11 NALIDMEQYKALYQE-SVEDPEGFWAEQA-KRLDWFKPFDTVLDWNAPFI---------- 58
Query: 165 GTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVAN 224
W LN++ CL H + + VAI+W D +S +TY+EL +V AN
Sbjct: 59 -KWFEDGELNVSYNCL--DRHLKTRGDKVAIIWEGDDPGDSRK--ITYRELHREVCRFAN 113
Query: 225 ALDTM-FSKGDAIAIDMPMTVRAVIIYLA---------IILAGYVVVSIADSFAAREIAT 274
AL ++ KGD +AI MPM A + LA ++ G F+A +A
Sbjct: 114 ALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGG---------FSAEALAD 164
Query: 275 RLRVSKAKGIFTQDFILRGGRKFPLYSKV---LGAAPL--KAIVLPAIGNDVGIPLRE-Q 328
R+ + AK + T D +RGG+ PL + V L P K IV+ G DV E +
Sbjct: 165 RIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDV--DWVEGR 222
Query: 329 DLSWKDFLSSV-DYHPRPNYYSPVYNPVDA--VVNILFSSGTTGEPKAIPWTQLSSIRCT 385
DL W + ++ D P P+DA + IL++SG+TG+PK + T T
Sbjct: 223 DLWWHELVAGASDECE------PE--PMDAEDPLFILYTSGSTGKPKGVLHT-------T 267
Query: 386 AEG---WAHI------DLKVGDVYCWPT-NLGWVMG-PVILFSSFLNGATLALYQG---S 431
G +A + D K GDVY W T ++GWV G I++ NGAT +++G
Sbjct: 268 G-GYLVYAAMTMKYVFDYKDGDVY-WCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNY 325
Query: 432 PLERSFGKFVQDAGVTVLGTVPSLVKA 458
P F + + VT+ T P+ ++A
Sbjct: 326 PDPGRFWEVIDKHKVTIFYTAPTAIRA 352
|
Length = 637 |
| >gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase | Back alignment and domain information |
|---|
Score = 95.0 bits (236), Expect = 2e-20
Identities = 137/524 (26%), Positives = 205/524 (39%), Gaps = 100/524 (19%)
Query: 121 FRLFQKFTVEHPEAYWEIALKEISVVF------REAPKCI--LDRTDKSKHGGTWLPGSV 172
+ K +V+ P +W +I+ F C LD K W G
Sbjct: 32 YMEMYKRSVDDPAGFWS----DIASQFYWKQKWEGDEVCSENLDVR-KGPISIEWFKGGK 86
Query: 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FS 231
NI CL N + +AI W + + +TY EL ++V +AN L +
Sbjct: 87 TNICYNCL-DRNVEAGNGDKIAIYWEGN--EPGFDASLTYSELLDRVCQLANYLKDVGVK 143
Query: 232 KGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFIL 291
KGDA+ I +PM + I LA G V + F+A +A R+ K K + T + +
Sbjct: 144 KGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVK 203
Query: 292 RGGRKFPLYSKVLGAAPLKAIVLPAI------GNDVGIPL---------RE-------QD 329
RG + LK IV A+ G VGI L RE +D
Sbjct: 204 RGPK----------TINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRD 253
Query: 330 LSWKDFLSSVDYHPRPNYYSPVYNPVDAV-----VNILFSSGTTGEPKAIPWTQLSSIRC 384
+ W+D + PNY P V+ V + +L++SG+TG+PK + T +
Sbjct: 254 VWWQDVV--------PNY--PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVY 303
Query: 385 TAEGWAH-IDLKVGDVYCWPTNLGWVMG-PVILFSSFLNGATLALYQGSPLERSFGK--- 439
TA + + D K DVY + GW+ G + + LNGAT+ +++G+P G+
Sbjct: 304 TATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWD 363
Query: 440 FVQDAGVTVLGTVPSLVKAWR--NTNCLEGLDWTKIRSFASTGETSN----------VDD 487
V VT+ T P+LV++ + +R S GE N V D
Sbjct: 364 IVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGD 423
Query: 488 DLWLSSKAWYNAIIESCGG---TELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGV 544
S W+ GG T L A+ PQ G+ + VI+DE G
Sbjct: 424 SRCPISDTWWQT---ETGGFMITPLPGAW-------PQKPGSATFPFFGVQPVIVDEKGK 473
Query: 545 PYPDDQPCVGEVGLFPLYLGASDRLLNADH---EEVYFRGMPMY 585
+ C G + + + GA R L DH E YF+ Y
Sbjct: 474 EI--EGECSGYLCVKKSWPGAF-RTLYGDHERYETTYFKPFAGY 514
|
Length = 666 |
| >gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 93.4 bits (233), Expect = 4e-20
Identities = 83/302 (27%), Positives = 121/302 (40%), Gaps = 57/302 (18%)
Query: 168 LPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD 227
LP + A RR D A V+ + R +TY EL +V A AL
Sbjct: 7 LPELLARAA---------RRFGDKE-AYVFGDQR--------LTYAELNARVRRAAAALA 48
Query: 228 TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT 286
+ KGD +AI P + VI L + AG VVV + + A E A L AK +F
Sbjct: 49 ALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFV 108
Query: 287 QDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345
L + P L+ +V+ D P E+ ++ DFL++ D P
Sbjct: 109 LGLFL------GVDYSATTRLPALEHVVICETEEDD--PHTEKMKTFTDFLAAGD----P 156
Query: 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGD------ 398
+P +P D V +ILF+SGTTG PK T + A WA L GD
Sbjct: 157 AERAPEVDP-DDVADILFTSGTTGRPKGAMLTHRQLLS-NAADWAEYLGLTEGDRYLAAN 214
Query: 399 ----VYCWPTNLGWVMGPVILFSSFLNGAT-LALYQGSPLERSFGKFVQDAGVTVLGTVP 453
V+ + + + + GAT L L P + F + ++ +TVL P
Sbjct: 215 PFFHVFGY---------KAGVNAPLMRGATILPLPVFDP-DEVF-RLIETERITVLPGPP 263
Query: 454 SL 455
++
Sbjct: 264 TM 265
|
Length = 513 |
| >gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase | Back alignment and domain information |
|---|
Score = 90.0 bits (223), Expect = 9e-19
Identities = 114/460 (24%), Positives = 196/460 (42%), Gaps = 41/460 (8%)
Query: 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECC 179
+ F + ++E PEA+W + I ++ P+ ILD + W G N+ C
Sbjct: 2 RYEEFYQRSIEQPEAFWAEQARRID--WQTPPQRILD--YSNPPFARWFAGGRTNL--CH 55
Query: 180 LLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAI 238
H + +A+V + +TY++L +V + A+AL + +GD + I
Sbjct: 56 NALDRHLDERGEQLALVTVSSETGQERT--LTYRQLHREVNVFASALRALGVGRGDRVLI 113
Query: 239 DMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFP 298
MPM AV LA G + + FA+ +A R+ + K I + D +RGG+ P
Sbjct: 114 YMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIP 173
Query: 299 LYSKVLGAAPLKAIVLPA--IGNDVGI-PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPV 355
Y +L AA +A P + D G+ P+R + +D VDY + PV
Sbjct: 174 -YKPLLDAAIAEAQHPPPHVLLVDRGLAPMRL--IPGRD----VDYAALRTQHEDAQVPV 226
Query: 356 DAVVN-----ILFSSGTTGEPKAIPW-TQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWV 409
+ + + IL++SGTTG+PK + ++ WA ++ G V +++GWV
Sbjct: 227 EWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWV 286
Query: 410 MG-PVILFSSFLNGATLALYQGSPLERSFG---KFVQDAGVTVLGTVPSLVKAWR--NTN 463
+G I+++ L GA LY+G P G V+ GV + + P+ ++ + +
Sbjct: 287 VGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAA 346
Query: 464 CLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELS---SAYIQGSLLQ 520
L D + + GE + W++ +I++ TE A + G L+
Sbjct: 347 WLRKHDLSSLHWLFLAGEPLDEPTAHWITD-GLGKPVIDNYWQTETGWPVLAIMPGLDLK 405
Query: 521 PQAFGAFSTATMTAGLVILDECGVPYPDDQPC-VGEVGLF 559
P G+ L +LDE +PC E G+
Sbjct: 406 PVKLGSPGLPMYGYHLRVLDEA-----TGRPCGPNEKGVL 440
|
This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate. Length = 628 |
| >gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 3e-18
Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 33/259 (12%)
Query: 210 MTYKELREQVMLVANALDTMFS-KGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+T+ +L ++ + +A L + +GD +A+ P ++ ++L + AG +V + S+
Sbjct: 11 LTFADLLKKALRLAKGLRKLGLKQGDVVALISPNSIEFPPVFLGCLAAGGIVSAANPSYT 70
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-----KAIVLPAIGNDVGI 323
E+A +L++SK K IF KV AA + IVL + + V
Sbjct: 71 PDELAHQLKISKPKLIFCDP---------DELDKVKEAAKELGPVVRIIVLDSAPDGVLR 121
Query: 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 383
+D L +P+ + D +L+SSGTTG PK + LS
Sbjct: 122 I--------EDLLEPRLGAEDEFRPTPLIDGKDDTAALLYSSGTTGLPKGV---MLSHKN 170
Query: 384 CTA------EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSF 437
A + DV G +S L GAT+ + E +F
Sbjct: 171 IIANLSQVQDTLKGNPDSSNDVVLTFLPFYHAYGLTTTLASLLCGATVIIMPKFDSE-TF 229
Query: 438 GKFVQDAGVTVLGTVPSLV 456
K ++ VT L VP +
Sbjct: 230 LKLIEKYKVTSLFLVPPIA 248
|
This family contains two functionally unique groups of proteins; one group is insect firefly luciferases and the other is plant 4-coumarate:coenzyme A ligases. However, they share significant sequence similarity in spite of their functional diversity. Luciferase catalyzes the production of light in the presence of MgATP, molecular oxygen, and luciferin. In the first step, luciferin is activated by acylation of its carboxylate group with ATP, resulting in an enzyme-bound luciferyl adenylate. In the second step, luciferyl adenylate reacts with molecular oxygen, producing an enzyme-bound excited state product (Luc=O*) and releasing AMP. This excited-state product then decays to the ground state (Luc=O), emitting a quantum of visible light. 4-coumarate:coenzyme A ligase is a key enzyme in the phenylpropanoid metabolic pathway for monolignol and flavonoid biosynthesis. It catalyzes the synthesis of hydroxycinnamate-CoA thioesters in a two-step reaction, involving the formation of hydroxycinnamate-AMP anhydride and then the nucleophilic substitution of AMP by CoA. The phenylpropanoid pathway is one of the most important secondary metabolism pathways in plants and hydroxycinnamate-CoA thioesters are the precursors of lignin and other important phenylpropanoids. Length = 487 |
| >gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 3e-18
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 29/236 (12%)
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSF 419
IL++SGTTG+PK + + + + I L GDV L V+G L +
Sbjct: 5 ILYTSGTTGKPKGVVLSHRNLLANAQALAQAIGLTEGDVLLSVLPLFHVVGGGSGLLGAL 64
Query: 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479
L G T+ LY+G P SF + ++ VTVL VP+L A G D + +R S
Sbjct: 65 LAGGTVVLYEGFPFPLSFLELIEQYRVTVLFGVPTLYDALAKAAEDRGYDLSSLRLLISG 124
Query: 480 GETSNVDDDLWLSSKAWYNA-----IIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA 534
GE L + I+E G TE S + + G T
Sbjct: 125 GEP------LSPELLERFEERPGAPILEGYGLTETSVVTSTNPDSELKKPG-------TV 171
Query: 535 GLVILD-ECGVPYPDDQPC-VGEVG--------LFPLYLGASDRLLNADHEEVYFR 580
G + E V + +P GEVG + Y A E+ ++R
Sbjct: 172 GRPVPGVEVRVVDEEGKPLPPGEVGELVVRGPWVMKGYWNNPPETTAAATEDGWYR 227
|
This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain. Length = 338 |
| >gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 3e-16
Identities = 92/339 (27%), Positives = 143/339 (42%), Gaps = 57/339 (16%)
Query: 166 TWLPGSVLNIAECCL---LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLV 222
+WL +NIA + + K VA+ + D S TYKEL+E
Sbjct: 35 SWLETGKVNIAYEAIDRHADGGRKDK----VALRYL----DASRKEKYTYKELKELSNKF 86
Query: 223 ANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKA 281
AN L + KGD + I MP L + G +V + ++F + RL S+A
Sbjct: 87 ANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEA 146
Query: 282 KGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVD 340
K + T +L K P LK ++L +G DV +D
Sbjct: 147 KVLITTPALLE--------RKPADDLPSLKHVLL--VGEDVEEGPGT-----------LD 185
Query: 341 YHPRPNYYSPVYNPV-----DAVVNIL-FSSGTTGEPKAIPWTQLSSIRCTAEG-WAHID 393
++ S ++ D IL ++SG+TG+PK + + ++ G + +D
Sbjct: 186 FNALMEQASDEFDIEWTDREDGA--ILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYV-LD 242
Query: 394 LKVGDVYCWPT-NLGWVMGPVI-LFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVL 449
L DVY W T + GWV G +F+ +LNGAT + G SP ER + ++D VTV
Sbjct: 243 LHEDDVY-WCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSP-ERWYR-ILEDYKVTVW 299
Query: 450 GTVPS----LVKAWRNTNCLEGLDWTKIRSFASTGETSN 484
T P+ L+ A + ++ D + +R S GE N
Sbjct: 300 YTAPTAIRMLMGA--GDDLVKKYDLSSLRHILSVGEPLN 336
|
Length = 570 |
| >gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 4e-15
Identities = 56/261 (21%), Positives = 96/261 (36%), Gaps = 43/261 (16%)
Query: 210 MTYKELREQVMLVANALDTMF-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY EL V +A L KGD + + P ++ +++LA++ AG VV+ A+
Sbjct: 33 LTYAELERLVRRLAAGLAARGGRKGDVVLLLSPNSLEFPVVFLAVLSAG-AVVTTANPLY 91
Query: 269 -AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLRE 327
EIA +++ S AK T L K+ A ++L + +
Sbjct: 92 TPAEIAKQVKDSGAKLAITTS---------ELAEKLASLALEPVVLLDSADDGSA----- 137
Query: 328 QDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ---LSSIRC 384
+ + + P V D + +SSGTTG K + T ++++
Sbjct: 138 -------AIDDLLFADEPEPPVVVIKQDDVAA-LPYSSGTTGRSKGVMLTHRNLIANVAQ 189
Query: 385 TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL----ERSFGKF 440
G + DV + + G + L L G+ + KF
Sbjct: 190 LVAGEG-PNFDREDVTLCVLPMFHIYG----LTVILLA---LLRLGATVVVMPRFDLEKF 241
Query: 441 ---VQDAGVTVLGTVPSLVKA 458
++ VT L VP +V A
Sbjct: 242 LAAIEKYKVTHLPVVPPIVLA 262
|
4-Coumarate:coenzyme A ligase is a key enzyme in the phenylpropanoid metabolic pathway for monolignol and flavonoid biosynthesis. It catalyzes the synthesis of hydroxycinnamate-CoA thioesters in a two-step reaction, involving the formation of hydroxycinnamate-AMP anhydride and the nucleophilic substitution of AMP by CoA. The phenylpropanoid pathway is one of the most important secondary metabolism pathways in plants and hydroxycinnamate-CoA thioesters are the precursors of lignin and other important phenylpropanoids. Length = 504 |
| >gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD | Back alignment and domain information |
|---|
Score = 74.9 bits (185), Expect = 3e-14
Identities = 60/284 (21%), Positives = 94/284 (33%), Gaps = 70/284 (24%)
Query: 210 MTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY EL E A L KGD +A+ +P + I Y I+ AG VVV + +
Sbjct: 25 LTYAELDELSDRFAAYLQQLGVKKGDRVALMLPNCPQFPIAYFGILKAGAVVVPVNPLYT 84
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
RE+ +L S AK +
Sbjct: 85 PRELEHQLNDSGAKVLIV------------------------------------------ 102
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ--LSSIRCTA 386
+S++D L+S P PV D + + ++ GTTG PK T L +
Sbjct: 103 AISFEDALASGAPLP-----LPVELSPDDLAVLQYTGGTTGVPKGAMLTHRNLVANVQQI 157
Query: 387 EGWAHIDLKVGD----------VYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERS 436
W + D ++ N + GAT L + +
Sbjct: 158 AAWVKDLREGEDRFLTALPLFHIFGLTVN---------MLLGLRLGATNVLVP-NFRPIN 207
Query: 437 FGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480
K ++ T+ VP+L A N + D++ +R S G
Sbjct: 208 VLKEIKRYRFTIFPGVPTLYNALLNHPEFKKYDFSSLRLCISGG 251
|
This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 468 |
| >gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 5e-14
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 48/269 (17%)
Query: 210 MTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
+TY++L + ++ + + +G+ I I +P +V + LA++LAG V V + +
Sbjct: 8 LTYRKLLTASLALSRLIKKLTKEGENIGIMLPSSVAGALANLALLLAGKVPVMLNFTAGE 67
Query: 270 REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI--PLRE 327
+ + + + K + T R F L L+ +V+ G + LR
Sbjct: 68 EGLRSACKQAGIKTVIT-------SRAF------LEKLKLEGLVVLLEGVRIVYLEDLRA 114
Query: 328 QDLSWKD----FLSSVDYHPRPNYYSPVYNP-VDAVVNILFSSGTTGEPKAIPWTQ---L 379
+ +S D FL++ P + D ILF+SG+ G PK + + L
Sbjct: 115 K-ISKADKLKAFLAA--KLPPALLRLFLAGAKPDDPAVILFTSGSEGLPKGVVLSHRNLL 171
Query: 380 SSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF-LNGATL--------ALYQG 430
++I A A IDL DV ++G + LF +F L L +Y
Sbjct: 172 ANIDQIA---AVIDLNTEDV---------LLGALPLFHAFGLTVTLLLPLLTGLRVVYYP 219
Query: 431 SPLE-RSFGKFVQDAGVTVLGTVPSLVKA 458
+PL+ + + ++D T+L P+ ++
Sbjct: 220 NPLDAKKIAELIRDYKATILCGTPTFLRG 248
|
Acyl-acyl carrier protein synthase (Aas) is a membrane protein responsible for a minor pathway of incorporating exogenous fatty acids into membrane phospholipids. Its in vitro activity is characterized by the ligation of free fatty acids between 8 and 18 carbons in length to the acyl carrier protein sulfydryl group (ACP-SH) in the presence of ATP and Mg2+. However, its in vivo function is as a 2-acylglycerophosphoethanolamine (2-acyl-GPE) acyltransferase. The reaction occurs in two steps: the acyl chain is first esterified to acyl carrier protein (ACP) via a thioester bond, followed by a second step where the acyl chain is transferred to a 2-acyllysophospholipid, thus completing the transacylation reaction. This model represents the C-terminal domain of the enzyme, which belongs to the class I adenylate-forming enzyme family, including acyl-CoA synthetases. Length = 489 |
| >gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 2e-13
Identities = 75/388 (19%), Positives = 124/388 (31%), Gaps = 71/388 (18%)
Query: 211 TYKELREQVMLVANALDTMFS--KGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
TY+EL E+ +A L GD +A+ + + V+ LA++ AG V + ++
Sbjct: 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYP 60
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
A +A L + A+ + T A A ++ + + L
Sbjct: 61 AERLAFILEDAGARLLLTDS----------------ALASRLAGLVLPVILLDPLELAAL 104
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 388
D + P Y ++++SG+TG PK + T S + A
Sbjct: 105 DDAPAPPPPDAPSGPDDLAY------------VIYTSGSTGRPKGVVVTHRSLVNLLAWL 152
Query: 389 WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDA---- 444
L D +L + +F + L GATL + ER +
Sbjct: 153 ARRYGLDPDDRVLQFASLSFDASVEEIFGALLAGATLVVPPED-EERDDAALLAALIAEH 211
Query: 445 GVTVLGTVPSLVKAWRNTNCLEGLDWTKIRS---FASTGETSNVDDDLWLSSKAWYNAII 501
VTVL PSL+ L + S GE L+ +
Sbjct: 212 PVTVLNLTPSLLAL------LAAALPPALASLRLVILGGE--------ALTPAL-VDRWR 256
Query: 502 ESCGGTELSSAY------IQGSLLQPQAFGAFSTATMTAG-------LVILDECGVPYPD 548
G L + Y + + A + + G L +LD+ P P
Sbjct: 257 ARGPGARLINLYGPTETTVWSTATLVDPDDAPRESPVPIGRPLANTRLYVLDDDLRPVPV 316
Query: 549 DQP---CVGEVGLFPLYLGASDRLLNAD 573
+G G+ YL L A+
Sbjct: 317 GVVGELYIGGPGVARGYLN--RPELTAE 342
|
This model represents a domain responsible for the specific recognition of amino acids and activation as adenylyl amino acids. The reaction catalyzed is aa + ATP -> aa-AMP + PPi. These domains are usually found as components of multi-domain non-ribosomal peptide synthetases and are usually called "A-domains" in that context (for a review, see ). A-domains are almost invariably followed by "T-domains" (thiolation domains, pfam00550) to which the amino acid adenylate is transferred as a thiol-ester to a bound pantetheine cofactor with the release of AMP (these are also called peptide carrier proteins, or PCPs. When the A-domain does not represent the first module (corresponding to the first amino acid in the product molecule) it is usually preceded by a "C-domain" (condensation domain, pfam00668) which catalyzes the ligation of two amino acid thiol-esters from neighboring modules. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group. Length = 409 |
| >gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 2e-13
Identities = 70/287 (24%), Positives = 110/287 (38%), Gaps = 61/287 (21%)
Query: 183 SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPM 242
H + N +AI + +TYK+ E V VAN L+ SK IAI +
Sbjct: 8 KKHASLQPNKIAIKENDRV--------LTYKDWFESVCKVANWLNEKESKNKTIAILLEN 59
Query: 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSK 302
+ + ++ +AG+ V + + E+ RL +S A I T+ + L
Sbjct: 60 RIEFLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLN---------- 109
Query: 303 VLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNIL 362
L I D WK + Y P Y+P+ N +A +
Sbjct: 110 -----DLPDEEGRVIEID----------EWKRMIE--KYLPT---YAPIENVQNAPFYMG 149
Query: 363 FSSGTTGEPKAIPWTQLS---SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS- 418
F+SG+TG+PKA Q S S C D + + V+ L S
Sbjct: 150 FTSGSTGKPKAFLRAQQSWLHSFDCNVH----------DFHMKREDS--VLIAGTLVHSL 197
Query: 419 FLNGATLALYQGSP--LERSFGKF-----VQDAGVTVLGTVPSLVKA 458
FL GA LY G L R F ++ ++V+ TVP+++++
Sbjct: 198 FLYGAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLES 244
|
Length = 487 |
| >gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 2e-13
Identities = 94/400 (23%), Positives = 165/400 (41%), Gaps = 73/400 (18%)
Query: 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK--SKHGGTWLPGSVLNIA 176
S+ F + +++ PEA+W + I ++ +LD ++ ++ W G N+
Sbjct: 2 MSYSEFYQRSIDDPEAFWAEQARRID--WQTPFTQVLDYSNPPFAR----WFVGGRTNLC 55
Query: 177 ECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDA 235
+ H K +A++ DE T+++L ++V +A L ++ +GD
Sbjct: 56 HNAV--DRHLAKRPEQLALIAVSTETDEERT--YTFRQLHDEVNRMAAMLRSLGVQRGDR 111
Query: 236 IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 295
+ I MPM A LA G + + FA+ +A R+ +K I + D RGG+
Sbjct: 112 VLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGK 171
Query: 296 KFPLYSKVLGAAPLKAIVLPA---------------IGNDVGI-PLREQDLSWK---DFL 336
P Y +L A A P G DV LR Q L + ++L
Sbjct: 172 VVP-YKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRDVDYATLRAQHLGARVPVEWL 230
Query: 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA------ 390
S + P+Y IL++SGTTG+PK + R T G+A
Sbjct: 231 ESNE----PSY-------------ILYTSGTTGKPKGVQ-------RDTG-GYAVALATS 265
Query: 391 --HI-DLKVGDVYCWPTNLGWVMG-PVILFSSFLNGATLALYQGSPLERSFG---KFVQD 443
I K G+ + +++GWV+G I+++ L G +Y+G P G + V+
Sbjct: 266 MDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEK 325
Query: 444 AGVTVLGTVPSLVKAWR--NTNCLEGLDWTKIRSFASTGE 481
V + + P+ ++ + + L D + +R+ GE
Sbjct: 326 YKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGE 365
|
Length = 629 |
| >gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 3e-12
Identities = 63/278 (22%), Positives = 92/278 (33%), Gaps = 61/278 (21%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY+EL V +A L + GD + + +P VI+Y A+ G + V +
Sbjct: 41 LTYRELDAAVDRLAAGLLALGIGPGDRVLVQLPNVAEFVILYFALFKLGAIPVLALPAHR 100
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
A EI R S+AK D
Sbjct: 101 AHEIGHFARQSEAKAYIIAD---------------------------------------- 120
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ---LSSIRCT 385
+ F DY + + V S GTTG PK IP T L S R +
Sbjct: 121 --RFSGF----DYAA---LARELLEELPDVALFQLSGGTTGLPKLIPRTHNDYLYSARAS 171
Query: 386 AEGWAHIDLKVGDVYCWPTNLG--WVMGPVILFSSFLNGATLALYQ-GSPLERSFGKFVQ 442
AE +D G VY + + L + L G T+ L+ SP ++
Sbjct: 172 AE-ACGLD--PGTVYLAVLPAAHNFTLSSPGLLGALLAGGTVVLHHPPSPDV--AFPLIE 226
Query: 443 DAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480
VT VP+L+ W + D + +R G
Sbjct: 227 REKVTHTALVPALLNLWLEAAEWDQADLSSLRVIQVGG 264
|
2,3-dihydroxybenzoate-AMP ligase activates 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate. However, it can also catalyze the ATP-PPi exchange for 2,3-DHB analogs, such as salicyclic acid (o-hydrobenzoate), as well as 2,4-DHB and 2,5-DHB, but with less efficiency. Proteins in this family are the stand-alone adenylation components of non-ribosomal peptide synthases (NRPSs) involved in the biosynthesis of siderophores, which are low molecular weight iron-chelating compounds synthesized by many bacteria to aid in the acquisition of this vital trace elements. In Escherichia coli, the 2,3-dihydroxybenzoate-AMP ligase is called EntE, the adenylation component of the enterobactin NRPS system. Length = 483 |
| >gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 5e-12
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 29/198 (14%)
Query: 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVR 245
+ + VA++++E +TY+EL E+V +A+ L GD +AI
Sbjct: 27 KDRPDGVALMYKEL----GGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPE 82
Query: 246 AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD------FILRGGRKFPL 299
I LAI+ G V V I + ++A L S++K IF ++ + +
Sbjct: 83 WAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKV 142
Query: 300 YSKVLGAAPLKAIVLP-----AIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNP 354
++ ++ V + D GI L D S R P
Sbjct: 143 VDLIVIIDLVREAVEAKALVLEVFPDEGISLFLID--------SAGLEGRIAPPKP---- 190
Query: 355 VDAVVNILFSSGTTGEPK 372
D + I+++SGTTG PK
Sbjct: 191 -DDLATIIYTSGTTGTPK 207
|
Length = 613 |
| >gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 7e-11
Identities = 82/396 (20%), Positives = 121/396 (30%), Gaps = 119/396 (30%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY EL + +A AL + GD +A +P V++YLA G V+ I +
Sbjct: 2 LTYGELDDAADRLAAALAELGVRPGDVVAFQLPNWWEFVVVYLACARIGAVINPIVPIYR 61
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
RE+ LR ++A + + +P
Sbjct: 62 ERELGFILRQARA----------------------------RVLFVPD------------ 81
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ---LSSIRCT 385
++ F DY P D V +L++SGTTGEPK + T L+ +R
Sbjct: 82 --EFRGF----DYAAMP----------DDVALLLYTSGTTGEPKGVMHTHNTLLAEVRSY 125
Query: 386 AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL-------ERSFG 438
E L DV P+ L + G FL G L L G+ +
Sbjct: 126 VERLG---LTPDDVVLMPSPLAHITG-------FLYGLELPLLLGATVVLQDRWDPARAL 175
Query: 439 KFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498
+ +++ GVT + G D +R F G V +L
Sbjct: 176 ELIREHGVTFTMGATPFLADLLAAADAAGPDLPSLRVFLCGGAP--VPREL--------- 224
Query: 499 AIIESC---GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP-------- 547
G ++ AY G P G P P
Sbjct: 225 --ARRAAEALGAKVVRAY--GMTEVPLVTVGTPDD---PDDKRAATDGRPVPGVEVRIVD 277
Query: 548 -DDQP----CVGEV-----GLFPLYLGASDRLLNAD 573
D GE+ LF LG D N +
Sbjct: 278 DDGNDVPPGEEGELQVRGPQLF---LGYLDPPDNTE 310
|
Cyclohexanecarboxylate-CoA ligase activates the aliphatic ring compound, cyclohexanecarboxylate, for degradation. It catalyzes the synthesis of cyclohexanecarboxylate-CoA thioesters in a two-step reaction involving the formation of cyclohexanecarboxylate-AMP anhydride, followed by the nucleophilic substitution of AMP by CoA. Length = 437 |
| >gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 2e-10
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 25/214 (11%)
Query: 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251
A+V+ + R TY+E ++ +A+AL + KGD +A+ P T + +
Sbjct: 21 TAVVYGDRR--------YTYRETYDRCRRLASALSKLGIGKGDVVAVLAPNTPAMLEAHF 72
Query: 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT-QDFILRGGRKFPLYSKVLGAAPLK 310
+ +AG V+V + A +IA L S+AK +F Q+F L + L K
Sbjct: 73 GVPMAGAVLVPLNTRLDADDIAFILNHSEAKVLFVDQEF-------LSLAEEALALLSTK 125
Query: 311 AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVD--AVVNILFSSGTT 368
I+ I ++ ++D L+ D P P D +++ ++SGTT
Sbjct: 126 EIIDTEIIVISPAAEDSEEGDYEDLLAGGDPDP------LPIPPDDEWDPISLNYTSGTT 179
Query: 369 GEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCW 402
G PK + +T + + VY W
Sbjct: 180 GNPKGVVYTHRGAYLNALGNVIEWGMPDRPVYLW 213
|
This family includes fatty acyl-CoA synthetases that can activate medium to long-chain fatty acids. These enzymes catalyze the ATP-dependent acylation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. Fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. The fatty acyl-CoA synthetase from Thermus thermophiles in this family has been shown to catalyze the long-chain fatty acid, myristoyl acid. Also included in this family are acyl activating enzymes from Arabidopsis, which contains a large number of proteins from this family with up to 63 different genes, many of which are uncharacterized. Length = 520 |
| >gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 2e-09
Identities = 49/205 (23%), Positives = 73/205 (35%), Gaps = 29/205 (14%)
Query: 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTV 244
R+ + A+V+ + TY EL V VA AL D KGD +A +
Sbjct: 21 ARRYPDKTALVFGDRS--------WTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSD 72
Query: 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL 304
+++LA AG V V + E+A L S A+ + P L
Sbjct: 73 AYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALA------PTAEAAL 126
Query: 305 GAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFS 364
P+ ++L + + RE W DF V D + IL++
Sbjct: 127 ALLPVDTLILSLV-----LGGREAPGGWLDFAD--WAEAGSVAEPDVELADDDLAQILYT 179
Query: 365 SGTTGEPK-------AIPWTQLSSI 382
SGT PK A+ +S I
Sbjct: 180 SGTESLPKGAMLTHRALIAEYVSCI 204
|
Length = 523 |
| >gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 2e-08
Identities = 53/263 (20%), Positives = 95/263 (36%), Gaps = 51/263 (19%)
Query: 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYL 251
+A+V+ + +TY EL E+ +A L GD +A+ + + V+ L
Sbjct: 4 IALVYGDRS--------LTYAELNERANRLARRLRARGVGPGDVVALLLERSPELVVAIL 55
Query: 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKA 311
AI+ AG V + ++ A +A L S A+ + T +
Sbjct: 56 AILKAGAAYVPLDPAYPAERLAFMLEDSGARVLLTDE----------------------- 92
Query: 312 IVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDA--VVNILFSSGTTG 369
L + + L ++ P VDA + ++++SG+TG
Sbjct: 93 ------------SLAPLARADQLPLVILEEELDAEDAGPPAPAVDADDLAYVMYTSGSTG 140
Query: 370 EPKAIPWTQLSSIR-CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428
PK + +R + I L D + + L + ++ + LNG L L
Sbjct: 141 RPKGVAVPHRGVVRLVRNTNY--IALDPDDRFLQLSPLSFDASTFEIWGALLNGGRLVLI 198
Query: 429 QGSPLERS--FGKFVQDAGVTVL 449
L + + + GVTVL
Sbjct: 199 DKETLLDPDRLARLIAEQGVTVL 221
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the adenylation domain of the Bacillus subtilis termination module (Surfactin domain, SrfA-C) which recognizes a specific amino acid building block, which is then activated and transferred to the terminal thiol of the 4'-phosphopantetheine (Ppan) arm of the downstream peptidyl carrier protein (PCP) domain. Length = 474 |
| >gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 3e-08
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 32/291 (10%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+T+ ++V AN L + KGD +AI +P +AVI Y +LAG +VV +
Sbjct: 50 ITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTNPLYT 109
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
RE+ +L S AK I D + FP + V A ++ +++ I + + P +
Sbjct: 110 ERELEYQLHDSGAKVILCLDLV------FPRVTNVQSATKIEHVIVTRIADFLPFP---K 160
Query: 329 DLSW-------KDFLSSVDYHPRPNYYSPVYNPVDAVVNIL-----------FSSGTTGE 370
+L + + + V + ++ V V+ V + ++ GTTG
Sbjct: 161 NLLYPFVQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGF 220
Query: 371 PKAIPWTQLSSIRCTAEG--WAHIDLKVGDVYCWPTNLGWVMG-PVILFSSFLNGATLAL 427
PK + T + + T G W + + +V V G ++ S + G + L
Sbjct: 221 PKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVL 280
Query: 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478
++ F + ++ VT+ P++ A N+ L+ D + IR+ S
Sbjct: 281 IPKFDMKMVF-EAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACIS 330
|
Length = 563 |
| >gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 5e-08
Identities = 57/268 (21%), Positives = 97/268 (36%), Gaps = 45/268 (16%)
Query: 199 EDRCDESAVNL----MTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAI 253
D A+ +TY EL + +A L G+ +AI ++ V+ LA+
Sbjct: 238 ATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAV 297
Query: 254 ILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV 313
+ AG V + + A +A L S+ + TQ
Sbjct: 298 LKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQA------------------------- 332
Query: 314 LPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKA 373
+DVG+P D + + + P DA+ I+++SG+TG+PK
Sbjct: 333 -HLRVDDVGLPGLALDDALSEIPDTDP--------IPQALLGDALAYIIYTSGSTGQPKG 383
Query: 374 IPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLAL----YQ 429
+ + + A L D +L + +F + L GA L L Q
Sbjct: 384 VRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQ 443
Query: 430 GSPLERSFGKFVQDAGVTVLGTVPSLVK 457
P + ++ G+TVL VP L++
Sbjct: 444 VDPAA--LLELLEAQGITVLLLVPLLLR 469
|
Length = 642 |
| >gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 54.4 bits (132), Expect = 1e-07
Identities = 65/295 (22%), Positives = 113/295 (38%), Gaps = 49/295 (16%)
Query: 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FS 231
L I + + RK + A+ + R TY EL E+V +ANAL +
Sbjct: 6 LTIGR---ILRHGARKHPDKEAVYFDGRR--------TTYAELDERVNRLANALRALGVK 54
Query: 232 KGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT-QDFI 290
KGD +A+ + + Y A+ G V+ I EIA L ++ + + +F+
Sbjct: 55 KGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFV 114
Query: 291 LRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSP 350
PL + +L P V+ G+ PL + +++ L++ + P
Sbjct: 115 -------PLLAAILPQLPTVRTVI-VEGDGPAAPLAPEVGEYEELLAA---AS-DTFDFP 162
Query: 351 VYNPVDAVVNILFSSGTTGEPKAIPWT--QLSSIRCTAEGWAHIDLKVGDVY-----CWP 403
+ DA +L++SGTTG PK + + L W + L DVY +
Sbjct: 163 DIDENDAAA-MLYTSGTTGHPKGVVLSHRNLFLHSLAVCAW--LKLSRDDVYLVIVPMFH 219
Query: 404 TN-LGWVMGPVILFSSFLNGATLAL---YQGSPLERSFGKFVQDAGVTVLGTVPS 454
+ G P + + + GA + + L ++ VT VP+
Sbjct: 220 VHAWGL---PYL---ALMAGAKQVIPRRFDPENLL----DLIETERVTFFFAVPT 264
|
Length = 521 |
| >gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 47/223 (21%), Positives = 79/223 (35%), Gaps = 41/223 (18%)
Query: 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
T+++L + +A AL G +A+ ++ V++ A +L G + +
Sbjct: 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTE 60
Query: 270 REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQD 329
E +L + + T L K A L I E
Sbjct: 61 NERTNQLEDLDVQLLLTDS---------LLEEKDFQADSLDRIEAAG--------RYETS 103
Query: 330 LSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 389
LS +D + ++F+SGTTG+PKA+P T + +A G
Sbjct: 104 LS-------------------ASFNMDQIATLMFTSGTTGKPKAVPHT-FRNHYASAVGS 143
Query: 390 AHIDLKVGDVYCWPTNLGW--VMGPVILFSSFLNGATLALYQG 430
+L + W +L + G ILF + GATL +
Sbjct: 144 KE-NLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDK 185
|
This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 436 |
| >gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 3e-07
Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 26/183 (14%)
Query: 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
TY EL E A L GD +A+ +P + I++ I+ G V V ++ F
Sbjct: 60 TYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVPVSPLFRE 119
Query: 270 REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAI-------VLPAIGNDVG 322
E++ L + A+ + D + P+ +V L+ + VLPA
Sbjct: 120 HELSYELNDAGAEVLLALDQLA------PVVEQVRAETSLRHVIVTSLADVLPAEPT--- 170
Query: 323 IPL-------REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIP 375
+PL R D L ++ P P +DA+ + ++ GTTG PK
Sbjct: 171 LPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPA--LDALAALNYTGGTTGMPKGCE 228
Query: 376 WTQ 378
TQ
Sbjct: 229 HTQ 231
|
Length = 567 |
| >gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPT-NLGWVMGPVI-LFSS 418
+ F+SGTTG+PK + + + A +DL+ DVY W T + GWV G + +
Sbjct: 94 LHFTSGTTGKPKGVLHVHRAVVAHYATARYVLDLRPDDVY-WCTADPGWVTGTSYGIIAP 152
Query: 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN--CLEGLDWTKIRSF 476
LNG TL + +G + +++ VTV T P+ ++ D + +R
Sbjct: 153 LLNGVTLVVDEGEFDAERWYGILEEEKVTVWYTAPTALRMLMRAGPELAARYDLSSLRHI 212
Query: 477 ASTGETSN 484
AS GE N
Sbjct: 213 ASVGEPLN 220
|
This family is most similar to acetyl-CoA synthetase. Acetyl-CoA synthetase (ACS) catalyzes the formation of acetyl-CoA from acetate, CoA, and ATP. Synthesis of acetyl-CoA is carried out in a two-step reaction. In the first step, the enzyme catalyzes the synthesis of acetyl-AMP intermediate from acetate and ATP. In the second step, acetyl-AMP reacts with CoA to produce acetyl-CoA. This enzyme is only present in bacteria. Length = 443 |
| >gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 5e-07
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+T+ EL E+V +A L + GD +AI VI LAI+ AG V V I + +
Sbjct: 6 ITWAELAERVRRLAAGLIALGVKPGDRVAILAENRPEWVIADLAILAAGAVPVPIYPTSS 65
Query: 269 AREIATRLRVSKAKGIFTQD 288
E+A L S A+ +F +D
Sbjct: 66 PEEVAYILNDSGARVVFVED 85
|
This family includes long-chain fatty acid (C12-C20) CoA synthetases and Bubblegum-like very long-chain (>C20) fatty acid CoA synthetases. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Drosophila melanogaster mutant bubblegum (BGM) have elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene later named bubblegum. The human homolog (hsBG) of bubblegum has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions. Length = 456 |
| >gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 7e-07
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 22/251 (8%)
Query: 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
TY + +V +ANAL+++ GD +A T R + +Y A+ G V+ ++ +
Sbjct: 27 TYADFYRRVRRLANALESLGVKPGDRVATLAWNTHRHLELYFAVPGMGAVLHTLNPRLSP 86
Query: 270 REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQ 328
+IA + ++ K IF D L PL + P +KA+V+ + L
Sbjct: 87 EQIAYIINHAEDKVIFVDDDFL------PLLEAIAPRLPTVKAVVVYDDADMPETSL-PN 139
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-----R 383
++++ L P Y P + A + ++SGTTG PK + ++ S +
Sbjct: 140 VYAYEELLEEES----PEYEWPELDENTAAG-LCYTSGTTGNPKGVVYSHRSLVLHTLAS 194
Query: 384 CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQD 443
+ L D + V + +++ + GA L L S +++
Sbjct: 195 ALPDSLG---LSESDTVLPVVPMFHVNAWGLPYAATMVGAKLVLPGRYLDPASLLDLIEE 251
Query: 444 AGVTVLGTVPS 454
VTV VP+
Sbjct: 252 EKVTVSAGVPT 262
|
This family includes fatty acyl-CoA synthetases that can activate medium-chain to long-chain fatty acids. They catalyze the ATP-dependent acylation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. The fatty acyl-CoA synthetase from Thermus thermophiles in this family was shown catalyzing the long-chain fatty acid, myristoyl acid, while another member in this family, the AlkK protein identified from Pseudomonas oleovorans, targets medium chain fatty acids. This family also includes uncharacterized FACS proteins. Length = 517 |
| >gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 7e-07
Identities = 68/283 (24%), Positives = 112/283 (39%), Gaps = 35/283 (12%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY L E+V+ +A+ L + ++G+ +AI + + V LAG V V I
Sbjct: 26 LTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINPLLK 85
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFP-----LYSKVLGAAPLKAIVLPAIGNDVGI 323
A ++A L + + T L L + ++ P A
Sbjct: 86 AEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLIIVGDPAHASEGHPGEEPA-- 143
Query: 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR 383
SW L+ D P PV + A IL++SG+TG PK + + ++
Sbjct: 144 -------SWPKLLALGDADPPH----PVIDSDMAA--ILYTSGSTGRPKGVVLSH-RNLV 189
Query: 384 CTAEGWAH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQ 442
A+ A ++ + D L + G L ++F GAT+ L+ L R K ++
Sbjct: 190 AGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALE 248
Query: 443 DAGVTVLGTVPSLVKAWRNTNCLEGLDWTK-----IRSFASTG 480
G+T L VP L W L LDW + +R ++G
Sbjct: 249 KHGITGLAAVPPL---WAQ---LAQLDWPESAAPSLRYLTNSG 285
|
This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system , specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present. Length = 517 |
| >gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 8e-07
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 38/248 (15%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLA---------IILAGYV 259
+TY +L E+V + L + SK D + I M T+ +I L+ ++ GY
Sbjct: 93 LTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYS 152
Query: 260 VVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAI----VLP 315
V S+ D I +L ++ GI + I F + A L V+
Sbjct: 153 VKSLIDRI--ETITPKLIITTNYGILNDEII-----TFT--PNLKEAIELSTFKPSNVIT 203
Query: 316 AIGNDV----------GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAV--VNILF 363
ND+ IP LSW D + + + + +Y Y PV++ + IL+
Sbjct: 204 LFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYE--YVPVESSHPLYILY 261
Query: 364 SSGTTGEPKAIPWTQLSSIRCTAEGW-AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422
+SGTTG KA+ + + W + I+ + V +++GWV L+ S G
Sbjct: 262 TSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGFLYGSLSLG 321
Query: 423 ATLALYQG 430
T +++G
Sbjct: 322 NTFVMFEG 329
|
Length = 647 |
| >gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 8e-07
Identities = 67/281 (23%), Positives = 98/281 (34%), Gaps = 32/281 (11%)
Query: 200 DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGY 258
D D TY EL V AN L ++ GD +A +P AG
Sbjct: 51 DPLDRPET--WTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAAG- 107
Query: 259 VVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV---LGAAP-LKAIVL 314
+ I +IA LR + AK + T L ++ KV L A P L+ +V
Sbjct: 108 IANPINPLLEPEQIAELLRAAGAKVLVT----LGPFPGTDIWQKVAEVLAALPELRTVVE 163
Query: 315 PAIGNDVGIPLREQDLSWK--------DFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSG 366
+ + P R + DF + + P +S D V + G
Sbjct: 164 VDLARYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGG 223
Query: 367 TTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422
TTG PK T + + A W + L GD L V V + G
Sbjct: 224 TTGMPKLAQHTHGNEV---ANAWLGALLLGLGPGDTVFCGLPLFHVNALLVTGLAPLARG 280
Query: 423 ATLAL-----YQGSPLERSFGKFVQDAGVTVLGTVPSLVKA 458
A + L Y+G + +F K V+ + L VP++ A
Sbjct: 281 AHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAA 321
|
Length = 632 |
| >gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 9e-07
Identities = 65/289 (22%), Positives = 102/289 (35%), Gaps = 62/289 (21%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
TY ++ VA L + +GD + + +P V+ +L G V + +
Sbjct: 51 YTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYT 110
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
EIA + + S AK I TQ K+ G A + + I + L
Sbjct: 111 PAEIAKQAKASGAKLIITQS---------CYVDKLKGLAEDDGVTVVTIDDPPEGCLHFS 161
Query: 329 DLSWKDF--LSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA 386
+L+ D L V+ P D VV + +SSGTTG PK + T + A
Sbjct: 162 ELTQADENELPEVEISP------------DDVVALPYSSGTTGLPKGVMLTHKGLVTSVA 209
Query: 387 EGWAHID-------LKVGDV----------YCWPTNLGWVMGPVILFSSFLNGATLALYQ 429
+ +D DV Y + +L GA + +
Sbjct: 210 Q---QVDGENPNLYFHSDDVILCVLPMFHIYSLNS---------VLLCGLRVGAAILIMP 257
Query: 430 ----GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIR 474
G+ LE +Q VT+ VP +V A + +E D + IR
Sbjct: 258 KFEIGALLE-----LIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIR 301
|
Length = 537 |
| >gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 13/161 (8%)
Query: 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH----IDLKVGDVYCWPT-NLGWVM 410
D + +++SGTTG PK +P + A +A+ IDL+ DV+ W + GW
Sbjct: 88 DDLFAQMYTSGTTGLPKGVPV----PLNALAAFYAYMRYAIDLRDDDVF-WNIADPGWAY 142
Query: 411 G-PVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD 469
G + G T +G + ++ GVT P+ +
Sbjct: 143 GLYYAITGPLAMGITTVFLEGGFTAENTYDVLERLGVTNFAGSPTAYRMLMAAGADAAAR 202
Query: 470 WT-KIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTEL 509
K+R +S GE N + W + I + G TE
Sbjct: 203 IKLKLRVASSAGEPLNPEVVRWFQA-NLGVTIHDHYGQTET 242
|
MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria. Length = 440 |
| >gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 47/219 (21%), Positives = 75/219 (34%), Gaps = 58/219 (26%)
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVIL----- 415
++++SG+TG+PK + T +I C + LG G +L
Sbjct: 104 VIYTSGSTGKPKGVVITH-RNI-CNF------------LRAEGAILGIRPGDRVLQFASI 149
Query: 416 ---------FSSFLNGATLALYQGSPLERS--FGKFVQDAGVTVLGTVPSLVKAWRNTNC 464
F++ L G TL + R +F+ VTV PSL+ +
Sbjct: 150 AFDVSILEIFTTLLAGGTLVI--PPEELRLEDLAEFLNRLRVTVAHLTPSLLALLDPEDV 207
Query: 465 LEGLDWTKIRSFASTGET-SNVDDDLWLSSKAWYNAIIESCGGTE--LSSAYIQGSLLQP 521
+R+ GE D W + N G TE +++ + + +P
Sbjct: 208 ------PSLRTLILGGEACPQALVDRWSKPRRLLNT----YGPTEATVTATASRLTPGKP 257
Query: 522 QAFG-AFSTATMTAGLVILDECGVPYPDDQPCV--GEVG 557
G T +LD PD +P V G VG
Sbjct: 258 VNIGRPLPNYTC----WVLD------PDLEPLVPIGAVG 286
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family of siderophore-synthesizing NRPS includes the third adenylation domain of SidN from the endophytic fungus Neotyphodium lolii, ferrichrome siderophore synthetase, HC-toxin synthetase, and enniatin synthase. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 447 |
| >gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-06
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY EL E +A L + +KG +AI MP ++ + A++ AGYVVV++ +
Sbjct: 49 ITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVNPLYT 108
Query: 269 AREIATRLRVSKAKGIFT-QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI 323
RE+ +L+ S A+ I ++F +VL +K +V+ ++G+ +G
Sbjct: 109 PRELEHQLKDSGAEAIVVLENFA-------TTVQQVLAKTAVKHVVVASMGDLLGF 157
|
Length = 557 |
| >gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 30/237 (12%)
Query: 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG--DVYCWPTNLGWV--MG 411
D V I F+SGTTG PK I + + L+ DV+ L + +G
Sbjct: 147 DDVALIGFTSGTTGLPKGTMHFH-RDILAICDAFPRHVLQPTPDDVFIGSPPLAFTFGLG 205
Query: 412 PVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRN-TNCLEGLDW 470
++LF + + L Q +P K +Q+ T+L T P+ A+R ++ D
Sbjct: 206 GLVLFPLRFGASAVLLEQATP--PLLLKAIQEHRATILFTAPT---AYRAMLIKVKAFDI 260
Query: 471 TKIRSFASTGETSNVDDDLWLSSKAWYNA----IIESCGGTELSSAYIQGS--LLQPQAF 524
+ +R S GET + +W + WY II+ G TE+ +I + +P A
Sbjct: 261 SSLRKCVSAGET--LPAKVW---QDWYERTGLKIIDGIGATEMLHIFISANEENAKPGAT 315
Query: 525 GAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRG 581
G A I+D+ G P GE G + R L+ + ++ Y R
Sbjct: 316 G-KPVPGYEA--RIVDDQGNEVPR-----GEAGRLAVRGPTGCRYLDDERQQEYVRD 364
|
ABCL catalyzes the initial step in the 2-aminobenzoate aerobic degradation pathway by activating 2-aminobenzoate to 2-aminobenzoyl-CoA. The reaction is carried out via a two-step process; the first step is ATP-dependent and forms a 2-aminobenzoyl-AMP intermediate, and the second step forms the 2-aminobenzoyl-CoA ester and releases the AMP. 2-Aminobenzoyl-CoA is further converted to 2-amino-5-oxo-cyclohex-1-ene-1-carbonyl-CoA catalyzed by 2-aminobenzoyl-CoA monooxygenase/reductase. ABCL has been purified from cells aerobically grown with 2-aminobenzoate as sole carbon, energy, and nitrogen source, and has been characterized as a monomer. Length = 487 |
| >gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 3e-06
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 210 MTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
++Y ELREQ VAN L D GD +A +P T V+ LA G + V + +F
Sbjct: 1 LSYAELREQSARVANLLADLGVKPGDRVAGLLPRTPELVVAILATWRVGAIYVPLFTAFG 60
Query: 269 AREIATRLRVSKAKGIFT 286
+ I RL S AK + T
Sbjct: 61 PKAIEYRLGHSGAKVVVT 78
|
MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria. Length = 440 |
| >gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 4e-06
Identities = 61/288 (21%), Positives = 97/288 (33%), Gaps = 83/288 (28%)
Query: 191 NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVII 249
+ A++ +TY EL + +A AL + GD +A+ MP ++
Sbjct: 2 DATAVIDGAGT--------LTYGELARRANAIAAALRAAGVAPGDLVAVVMPKGWEQIVA 53
Query: 250 YLAIILAGYVVVSI-ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP 308
L I+LAG V I D A R A L + A+ + T
Sbjct: 54 VLGILLAGAAYVPIDPDQPAER-RAAILARAGARAVLTDP------------------GL 94
Query: 309 LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTT 368
+ P + D + P D + ++F+SG+T
Sbjct: 95 AQPEEAPDLLVVA-------DDAAAA---------ESPAPPPPRVDPDDLAYVIFTSGST 138
Query: 369 GEPKAIPWTQ---LSSIRCTAEGWA-------------HIDLKVGDVYCWPTNLGWVMGP 412
GEPK + T +++I + H DL V D++
Sbjct: 139 GEPKGVMITHRAAVNTILDVNRRFGVGPADRVLALSALHFDLSVYDIFG----------- 187
Query: 413 VILFSSFLNGATLALYQGSPLER----SFGKFVQDAGVTVLGTVPSLV 456
S+ GA L L R + + VQ GVTV +VP+L+
Sbjct: 188 --ALSA---GAALVL--PDEARRRDPDHWAELVQRHGVTVWNSVPALM 228
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the TLM biosynthetic gene cluster from Streptoalloteichus that consists of nine NRPS genes; the N-terminal module of TlmVI (NRPS-5) and the starter module of BlmVI (NRPS-5) are comprised of the acyl CoA ligase (AL) and acyl carrier protein (ACP)-like domains, which are thought to be involved in the biosynthesis of the beta-aminoalaninamide moiety. Length = 476 |
| >gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 4e-06
Identities = 53/205 (25%), Positives = 81/205 (39%), Gaps = 41/205 (20%)
Query: 211 TYKELREQVMLVANALDTMFS--KGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+Y+EL E+ +A L KGD + + M + + VI Y AI+ A VVV +
Sbjct: 37 SYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPVNPMNR 96
Query: 269 AREIATRLRVSKAK-GIFTQDFILRGGRKFPLYSKVL---GAAPLK-AIV------LPAI 317
E+A + S A+ I + L KV G L+ IV LPA
Sbjct: 97 EEELAHYVTDSGARVAIVGSE----------LAPKVAPAVGNLRLRHVIVAQYSDYLPAE 146
Query: 318 GND-------VGIPLR----EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSG 366
PL+ ++WK+ L++ P P+ P D + + ++SG
Sbjct: 147 PEIAVPAWLRAEPPLQALAPGGVVAWKEALAA-GLAPPPHTAGP-----DDLAVLPYTSG 200
Query: 367 TTGEPKAIPWTQLSSIRCTAEGWAH 391
TTG PK T ++ A G
Sbjct: 201 TTGVPKGCMHTH-RTVMANAVGSVL 224
|
Length = 546 |
| >gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 5e-06
Identities = 60/292 (20%), Positives = 92/292 (31%), Gaps = 116/292 (39%)
Query: 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMF-SKGDAIAIDMPMTVR 245
K + A+V D +TY EL+E+ +A L + GD +A+ +
Sbjct: 2 AKHPDRPALVVGGDT--------LTYAELKERADRLAARLLALGGRAGDPVAVYGHKSPD 53
Query: 246 AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG 305
A LA + AG V + S A R+ K+L
Sbjct: 54 AYAAILACLKAGAAYVPLDPSQPA----ERIA------------------------KILE 85
Query: 306 AAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSS 365
AA A+V P Y ILF+S
Sbjct: 86 AAGPAALV---------------------------ADPDDLAY------------ILFTS 106
Query: 366 GTTGEPKAIPWTQ---LSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-------- 414
G+TG+PK + + S + W D + + G V
Sbjct: 107 GSTGKPKGVQISHANLASFL-----DWMVEDFDLTE------------GDVFSNQAPFSF 149
Query: 415 ------LFSSFLNGATLAL----YQGSPLERSFGKFVQDAGVTVLGTVPSLV 456
LF + +GATL + PL +F+++ G+TV +VPS
Sbjct: 150 DLSVFDLFPALASGATLYVIPKEQIADPLA--LFEFLKEHGLTVWVSVPSFA 199
|
DltA belongs to the class I AMP-forming adenylation domain superfamily, which also includes acetyl-CoA synthetase, luciferase, and the adenylation domains of non-ribosomal synthetases. It catalyzes the two-step activation reaction of D-alanine: the formation of a substrate-AMP molecule as an intermediate, and then the transfer of the amino acid adenylate to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram-positive bacteria. Length = 447 |
| >gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 6e-06
Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 28/223 (12%)
Query: 211 TYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+++EL AN L +GD +A+ +P ++ +A I G V +
Sbjct: 43 SFRELGSLSRKAANVLSGACGLQRGDRVAVILPRVPEWWLVNVACIRTGLVFIPGTIQLT 102
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
A++I RL+ SKAK I T D + A + +I + L
Sbjct: 103 AKDILYRLQASKAKCIVTSDEL---------------APAVDSIASEC--PSLKTKLLVS 145
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVN----ILFSSGTTGEPKAIPWTQLS-SIR 383
+ S +L ++ S + V I F+SGTTG PK + S +
Sbjct: 146 EHSRDGWL---NFKELLKEASTEHTCVKTKSQEPMAIYFTSGTTGFPKMAEHSHSSLGLG 202
Query: 384 CTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGATL 425
G +DL D+ ++ GW+ + LFS ++ GA +
Sbjct: 203 LKVNGRYWLDLTPSDIMWNMSDTGWIKAAIWSLFSPWIQGACV 245
|
MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes. MACS enzymes are localized to mitochondria. Two murine MACS family proteins are found in liver and kidney. In rodents, a MACS member is detected particularly in the olfactory epithelium and is called O-MACS. O-MACS demonstrates substrate preference for the fatty acid lengths of C6-C12. Length = 530 |
| >gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 8e-06
Identities = 61/238 (25%), Positives = 87/238 (36%), Gaps = 50/238 (21%)
Query: 211 TYKELREQVMLVAN-ALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
TY L +AN L GD +A +P IIYLA + G V V + S+
Sbjct: 51 TYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLLPSWRE 110
Query: 270 REIATRLRVSKAKGIFT---------QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND 320
E+ L +AK F D IL + P +++G L PA
Sbjct: 111 AELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLA----PAT--- 163
Query: 321 VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPV----DAVVNILFSSGTTGEPKAIPW 376
LS ++ Y P+ + D + +LF+SGT G PK +
Sbjct: 164 -------SSLSLSQIIAD---------YEPLTTAITTHGDELAAVLFTSGTEGLPKGVML 207
Query: 377 TQ---LSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431
T L+S R ++L DV+ P LG G FL+G T G+
Sbjct: 208 THNNILASERAYCAR---LNLTWQDVFMMPAPLGHATG-------FLHGVTAPFLIGA 255
|
Length = 547 |
| >gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 1e-05
Identities = 57/276 (20%), Positives = 104/276 (37%), Gaps = 33/276 (11%)
Query: 209 LMTYKELREQVMLVANAL--DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266
MTYK+L E V VA L + KG+ IAI ++ +++ AI + V +
Sbjct: 27 EMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVPLNIR 86
Query: 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLR 326
E+ +L+ S +F + + + + + V I
Sbjct: 87 LTENELIFQLKDSGTTVLFVE----------KTFQNMALSMQKVSYVQRVI--------- 127
Query: 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA 386
L ++ N+ A I ++SGTTG+PK TQ +
Sbjct: 128 -----SITSLKEIEDRKIDNFVEK---NESASFIICYTSGTTGKPKGAVLTQENMFWNAL 179
Query: 387 EGWAHIDLKVGDVYCWPTNLGWVMGPVILFS--SFLNGATLALYQGSPLERSFGKFVQDA 444
IDL + D L + +G + LF+ + G + + + ++ ++
Sbjct: 180 NNTFAIDLTMHDRSIVLLPL-FHIGGIGLFAFPTLFAGGVIIVPRKFEPTKAL-SMIEKH 237
Query: 445 GVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480
VTV+ VP++ +A N + E + +R F + G
Sbjct: 238 KVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGG 273
|
Length = 496 |
| >gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 77/301 (25%), Positives = 116/301 (38%), Gaps = 41/301 (13%)
Query: 298 PLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDA 357
L+ +L A L A+V+PA L DL +D S P+ D
Sbjct: 37 ELWEAMLAAIKLGAVVIPATTL-----LTPADL--RDRFS--RGKPKAIVADETR--ADD 85
Query: 358 VVNILFSSGTTGEPKAIPWTQLS---SIRCTAEGWAHIDLKVGDVYCWPTNLGWV-MGPV 413
+ + F+SGTTG PK + T +S T W I L+ GD++ ++ GW
Sbjct: 86 PILLYFTSGTTGLPKLVLHTHVSYPVGHLSTMY-W--IGLQPGDIHLNISSPGWAKHAWS 142
Query: 414 ILFSSFLNGATLALYQGSPLE-RSFGKFVQDAGVTVLGTVPSLVKAWRN--TNCLEGLDW 470
F+ + GAT+ + R + ++ GVT P+ WR L D
Sbjct: 143 SFFAPWNAGATVFGINYPRFDARRYLGALEKFGVTTFCAPPT---VWRMFIQQDLAQYD- 198
Query: 471 TKIRSFASTGETSNVD-DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFST 529
++R S GE N + + KAW I + G TE ++A I S Q G+
Sbjct: 199 VRLREAVSAGEPLNPEVIERV--KKAWGLTIRDGYGQTE-TTAMIGNSPGQKVKPGSMGR 255
Query: 530 ATMTAGLVILDECGVPYPDDQPCVGEV---------GLFPLYLGASDRLLNADHEEVYFR 580
+V+LD+ G P GE+ GL Y+G ++ A Y
Sbjct: 256 PLPGYRVVLLDDEGKEIPVT---EGEIALDLGDRPIGLMLGYMGDPEKTAAAFRGGYYRT 312
Query: 581 G 581
G
Sbjct: 313 G 313
|
MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria. Length = 433 |
| >gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 27/306 (8%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
++Y EL QV + AL + + + + + M V I +L I AG V V++
Sbjct: 31 LSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALNTLLT 90
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
A + A L S+A+ +F +L P+ LG +P + + G
Sbjct: 91 ADDYAYMLEDSRARVVFVSGELL------PVIKAALGKSPHLEHRVVVGRPEAG------ 138
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 388
++ + L++ + P D L+SSG+TG PK + T S+ TAE
Sbjct: 139 EVQLAELLAT-----ESEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTH-SNPYWTAEL 192
Query: 389 WAH--IDLKVGDVYCWPTNL--GWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDA 444
+A + ++ DV L + +G + F + GAT L P + ++
Sbjct: 193 YARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSV-GATTVLMGERPTPDAVFDRLRRH 251
Query: 445 GVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA-IIES 503
T+ VP+L A L D ++R S GE + ++ +A + I++
Sbjct: 252 QPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEA--LPAEVGQRWQARFGVDIVDG 309
Query: 504 CGGTEL 509
G TE+
Sbjct: 310 IGSTEM 315
|
Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases. Length = 508 |
| >gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 211 TYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
T+ EL+E+ AN L D +GD +A+ +P + L I G V +
Sbjct: 2 TFAELKEESDRAANFLKDLGVGRGDRVAVLLPRVPELWAVILGCIKLGAVFIPGTTQLGP 61
Query: 270 REIATRLRVSKAKGIFTQD 288
++I RL + A+ I T
Sbjct: 62 KDIRYRLERAGARAIVTSA 80
|
MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes. Length = 430 |
| >gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 27/182 (14%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
T+++L + V +A L + GD + I P ++ A G ++V+I ++
Sbjct: 46 YTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNINPAYR 105
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-----------------LKA 311
A E+ L S + + D + ++ + P L+
Sbjct: 106 ASELEYALGQSGVRWVICAD----AFKTSDYHAMLQELLPGLAEGQPGALACERLPELRG 161
Query: 312 IVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEP 371
+V A G + + + +S R D +NI ++SGTTG P
Sbjct: 162 VVSLAPAPPPGFLAWHELQARGETVSREALAERQASLDR-----DDPINIQYTSGTTGFP 216
Query: 372 KA 373
K
Sbjct: 217 KG 218
|
Length = 558 |
| >gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 4e-05
Identities = 58/228 (25%), Positives = 82/228 (35%), Gaps = 54/228 (23%)
Query: 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNL----GWVM 410
D I ++SGTTG PK T + + A L GD P L G V+
Sbjct: 2 DDPALIQYTSGTTGRPKGAMLTHRNVLN-NGYSIARRLGLTEGDRTLVPVPLFHVFGLVL 60
Query: 411 GPVILFSSFLNGATLALYQGSPLERSFGKF--------VQDAGVTVLGTVPSLVKAWRNT 462
G + +S GATL L + KF ++ +T L VP++ A
Sbjct: 61 G---VLASLTAGATLVLME---------KFDPGAALRLIERERITALHGVPTMFIA---- 104
Query: 463 NCLEGLDWTK-----IRSFASTGETSNVDDDLWLSSKAWYN--AIIESCGGTELSSAYIQ 515
LE D+ K +R+ S G + V +L + + I G TE S Q
Sbjct: 105 -LLEHPDFDKFDLSSLRTGISGG--APVPPELVRRIREEFPMAEITTGYGMTETSGVGTQ 161
Query: 516 GSLLQPQAFGAFSTATMTAGLV-------ILDECGVPYPDDQPCVGEV 556
S P + T G I+D G P + VGE+
Sbjct: 162 TSGDDP-----YEDRPGTVGRPLPGVEVKIVDPDGGEVPPGE--VGEI 202
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Length = 347 |
| >gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 5e-05
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 35/260 (13%)
Query: 151 PKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLM 210
+ R SK G W ++ + + + D +R+ AV
Sbjct: 3 AVLLAPRRAASKAAGLWRDRTINDHFDAAV-----ANCPDKPALTAYRDG---HGAVRRF 54
Query: 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
+Y+EL +V +A L + +GD ++ +P +YLA G V+ + F
Sbjct: 55 SYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLMPIFRE 114
Query: 270 REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGI----- 323
RE++ L + +K +F + RG + ++ P L+ +V+ D
Sbjct: 115 RELSFMLNHADSK-VFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDRVLM 173
Query: 324 -PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ---L 379
P R+ L+ PRP SP D V ++++SGTTGEPK + T
Sbjct: 174 TPERDDTPDAAAILAG----PRP---SP-----DDVTQLIYTSGTTGEPKGVMHTANTLF 221
Query: 380 SSIRCTAEGWAHIDLKVGDV 399
S+I AE ++L GDV
Sbjct: 222 SNIHPYAE---RLELGGGDV 238
|
Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris. Length = 538 |
| >gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 17/164 (10%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
T++EL ++V +A AL GD + I M V LA + G + V +
Sbjct: 43 TTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIAVPVNFRLT 102
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
EIA + A + T+ + P+ + V PL + V+ A G +
Sbjct: 103 PPEIAFLVSDCGAHVVVTEAALA------PVATAVRDIVPLLSTVVVA-----GGSSDDS 151
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPK 372
L ++D L+ +PV P D+ I+++SGTTG PK
Sbjct: 152 VLGYEDLLAEAGPAH-----APVDIPNDSPALIMYTSGTTGRPK 190
|
Length = 542 |
| >gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 7e-05
Identities = 67/311 (21%), Positives = 113/311 (36%), Gaps = 29/311 (9%)
Query: 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
TY EL+E+V NAL + + + + + + T + I G V V I
Sbjct: 32 TYGELQEEVNRWGNALRELGIERENRVLLILLDTPEFPTAFWGAIKIGAVPVPINTLLTP 91
Query: 270 REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LK-AIVLPAIGNDVGIPLRE 327
+ L S+A+ + + + + L P L+ IV+ G
Sbjct: 92 DDYRYYLNDSRARVLVISEELW------EVLKPALQKDPHLRHVIVVGGAGPGA------ 139
Query: 328 QDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE 387
LS+ +++ S D + L+SSG+TG PK + + TAE
Sbjct: 140 --LSYAQLIATAAEELEAAATSA-----DDMAFWLYSSGSTGRPKGVVHLH-HDMLVTAE 191
Query: 388 GWAHIDLKV--GDVYCWPTNLGWVMG-PVILFSSFLNGATLALYQGSPLERSFGKFVQDA 444
+A L + DV L + G L+ GAT L P + ++
Sbjct: 192 AYAKNVLGITEDDVVFSAAKLFFAYGLGNGLYFPLSVGATTVLMPERPTPDAVFATIERY 251
Query: 445 GVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA-IIES 503
TV VP+L A D + +R S GE + ++ K + I++
Sbjct: 252 KPTVFFGVPTLYAAMLAAPEKPERDLSSLRLCVSAGEA--LPAEIGYRWKELFGLEILDG 309
Query: 504 CGGTELSSAYI 514
G TE+ ++
Sbjct: 310 IGSTEMLHIFL 320
|
Benzoate CoA ligase and 4-hydroxybenzoate-coenzyme A ligase catalyze the first activating step for benzoate and 4-hydroxybenzoate catabolic pathways, respectively. Although these two enzymes share very high sequence homology, they have their own substrate preference. The reaction proceeds via a two-step process; the first ATP-dependent step forms the substrate-AMP intermediate, while the second step forms the acyl-CoA ester, releasing the AMP. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Some bacteria can use benzoic acid or benzenoid compounds as the sole source of carbon and energy through degradation. Benzoate CoA ligase and 4-hydroxybenzoate-Coenzyme A ligase are key enzymes of this process. Length = 506 |
| >gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 8e-05
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 19/177 (10%)
Query: 203 DESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVV 260
D S ++Y EL+ V +A L + +GD + + +P +V +I+LA++ G +V
Sbjct: 60 DSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIV 119
Query: 261 VSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND 320
++ S + EI R+ FT P + L + I +P +
Sbjct: 120 TTMNPSSSLGEIKKRVVDCSVGLAFTS----------PENVEKLSPLGVPVIGVPENYDF 169
Query: 321 VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT 377
+ D+ P+P + D V I++SSGTTG K + T
Sbjct: 170 DSKRIEFPKFYEL-IKEDFDFVPKP----VIKQ--DDVAAIMYSSGTTGASKGVVLT 219
|
Length = 560 |
| >gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 9e-05
Identities = 41/200 (20%), Positives = 71/200 (35%), Gaps = 32/200 (16%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA---D 265
+TY EL EQ +A L + GD +A+ + R + LA+ AG V I
Sbjct: 75 LTYAELDEQSNALARGLLALGVRAGDGVAV-LARNHRGFV--LALYAAGKVGARIILLNT 131
Query: 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPL 325
F+ ++A K + D ++ +L A P L A G +
Sbjct: 132 GFSGPQLAEVAAREGVKALVYDD----------EFTDLLSALPPDLGRLRAWGGNP-DDD 180
Query: 326 REQDLSWKDFLSSVDYH-----PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLS 380
+ + + P+P + ++ +SGTTG PK P + S
Sbjct: 181 EPSGSTDETLDDLIAGSSTAPLPKPPKPGGI---------VILTSGTTGTPKGAPRPEPS 231
Query: 381 SIRCTAEGWAHIDLKVGDVY 400
+ A + + + G+
Sbjct: 232 PLAPLAGLLSRVPFRAGETT 251
|
Length = 549 |
| >gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 1e-04
Identities = 36/173 (20%), Positives = 60/173 (34%), Gaps = 34/173 (19%)
Query: 210 MTYKELREQVMLVANALDTMF-----SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264
+TY EL + +N L +GD +AI + +Y A +G I
Sbjct: 12 VTYGELEAR----SNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPIN 67
Query: 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIP 324
A EIA + S AK + +++ P +L + V
Sbjct: 68 WHLTAAEIAYIVDDSGAKVLIVS------AALADTAAELAAELPAGVPLLLVVAGPVP-- 119
Query: 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVV---NILFSSGTTGEPKAI 374
++ + ++ P P+ ++L+SSGTTG PK I
Sbjct: 120 ------GFRSYEEALAAQPDT--------PIADETAGADMLYSSGTTGRPKGI 158
|
Length = 502 |
| >gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 64/267 (23%), Positives = 98/267 (36%), Gaps = 46/267 (17%)
Query: 210 MTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVV--VSIADS 266
+TY E + V +A AL D G + I ++ ++ LA + AG VS A S
Sbjct: 81 VTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYS 140
Query: 267 FAAREIATRLR----VSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKA----IVLPAIG 318
+ + A +L+ + K + +F Q +++ L A L V
Sbjct: 141 LMSHDHA-KLKHLFDLVKPRVVFAQSG--------APFARALAALDLLDVTVVHVTGPGE 191
Query: 319 NDVGIPLREQDLSWKDFLSSVDY-HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT 377
I DL+ ++V D V LF+SG+TG PKA+ T
Sbjct: 192 GIASIAFA--DLAATPPTAAVAAAIAAITP--------DTVAKYLFTSGSTGMPKAVINT 241
Query: 378 Q--LSSIRCTAEGWAHIDLKVGDVYCWPTNLGW-----VMGPVILFSSFL-NGATLALYQ 429
Q + + E P +L W MG F+ L G TL +
Sbjct: 242 QRMMCANIAMQEQ-LRPREPDPPP---PVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDD 297
Query: 430 GSPLERSFGKFVQ---DAGVTVLGTVP 453
G PL F + ++ + TV G VP
Sbjct: 298 GKPLPGMFEETIRNLREISPTVYGNVP 324
|
Length = 624 |
| >gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 43/307 (14%)
Query: 156 DRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKEL 215
R S G W ++ + + C+ D T R A TY+EL
Sbjct: 10 PRRAASIAAGHWHDRTINDDLDACV-----ASCPDKTAVTAVRLGT---GAPRRFTYREL 61
Query: 216 REQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIAT 274
V VA L + +GD ++ +P ++YLA G V+ + F RE++
Sbjct: 62 AALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMPIFRERELSF 121
Query: 275 RLRVSKAKG-IFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWK 333
L+ +++K + + F R F + P LPA+ + V + + S++
Sbjct: 122 MLKHAESKVLVVPKTF-----RGFDHAAMARRLRPE----LPALRHVVVVG-GDGADSFE 171
Query: 334 DFLSSVDYHPRPNYYSPVYNP---VDAVVNILFSSGTTGEPKAIPWTQ---LSSIRCTAE 387
L + + P+ + + D V ++++SGTTGEPK + T +++I AE
Sbjct: 172 ALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAE 231
Query: 388 GWAHIDLKVGDVYCWPTNLGWVMG-------PVILFSSFLNGATLALYQGSPLERSFGKF 440
+ L DV + + G PV+L GAT A+ Q +
Sbjct: 232 ---RLGLGADDVILMASPMAHQTGFMYGLMMPVML------GAT-AVLQDIWDPARAAEL 281
Query: 441 VQDAGVT 447
++ GVT
Sbjct: 282 IRTEGVT 288
|
Length = 547 |
| >gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 2e-04
Identities = 48/226 (21%), Positives = 76/226 (33%), Gaps = 48/226 (21%)
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLG-----WVMGPVIL 415
++++SG+TG PK + + A L GD + W +
Sbjct: 98 VIYTSGSTGRPKGVMVEHRGLVNLLAWLQERYGLTAGDRVLQFASFSFDASVWE-----I 152
Query: 416 FSSFLNGATLALY----QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT 471
F L+GATL L P + +++ +TVL VPSL++A + L
Sbjct: 153 FPPLLSGATLVLAPPEVLRDPEA--LAELLREHRITVLHLVPSLLRALLDALEPAAL--P 208
Query: 472 KIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAY------IQGSLLQPQAFG 525
+R GE E G L +AY + + +
Sbjct: 209 SLRLVIVGGEA---------LPAELVRRWRELFPGARLVNAYGPTETTVDVTYHEVDP-D 258
Query: 526 AFSTATMTAG-------LVILDECGVPYPDDQPCVGEVGLFPLYLG 564
++ G + +LDE P P VG G LY+G
Sbjct: 259 DLDGGSVPIGRPIANTRVYVLDEDLRPVP-----VGVPG--ELYIG 297
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 445 |
| >gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 3e-04
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
T+ ++ +Q +A AL ++ GD IAI +I LAI +AG+V V + + A
Sbjct: 8 TWAQVADQARRIAAALQSLGLEPGDRIAILSKNCAEWIIADLAIWMAGHVSVPLYPTLTA 67
Query: 270 REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV---LPAIGNDVGIPLR 326
I L S AK +F K+ +KA V LP I L+
Sbjct: 68 ETIRYVLEHSDAKALFV--------------GKLDDWDAMKAGVPEGLPTIILFPYSTLK 113
Query: 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPK 372
+ W D L++ P P+ P + + I+++SGTTG+PK
Sbjct: 114 DHY-KWDDLLAA----TEPLQGRPLPEP-EDLATIVYTSGTTGQPK 153
|
The members of this family are bacterial long-chain fatty acid CoA synthetase. Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase in this family is involved in the synthesis of isoprenoid wax ester storage compounds when grown on phytol as the sole carbon source. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions. Length = 504 |
| >gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 30/191 (15%)
Query: 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYL 251
VA+V + R +TY EL E+ +A+ L GD + I + V L
Sbjct: 20 VALVCGDRR--------LTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAML 71
Query: 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF-PLYSKVLGAAP-L 309
A V V++ + E+ L S A + + R+F P ++VL P L
Sbjct: 72 GAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYE-------REFAPRVAEVLPRLPKL 124
Query: 310 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSP--VYNPVDAVVNILFSSGT 367
+ +V + + G L + ++D L++ SP +Y +L++ GT
Sbjct: 125 RTLV--VVEDGSGNDLLPGAVDYEDALAAGSPERDFGERSPDDLY--------LLYTGGT 174
Query: 368 TGEPKAIPWTQ 378
TG PK + W Q
Sbjct: 175 TGMPKGVMWRQ 185
|
Length = 533 |
| >gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 3e-04
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 18/216 (8%)
Query: 356 DAVVNILFSSGTTGEPK--AIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV 413
D + ++++SG+TG+PK AI L++ C + L D + + +G
Sbjct: 656 DNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAER--LQLAADDSMLMVSTFAFDLGVT 713
Query: 414 ILFSSFLNGATLAL--YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT 471
LF + +GATL L + +F + D GVTVL VPS ++A + +
Sbjct: 714 ELFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASRVALP--R 771
Query: 472 KIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTA 530
R+ GE VD + + +I G TE + L + + FG
Sbjct: 772 PQRALVCGGEALQVDLLARVRALGPGARLINHYGPTETTVGVSTYELSDEERDFGNVPIG 831
Query: 531 TMTA--GLVILDECGVPYPDDQPCVGEVGLFPLYLG 564
A GL ILD P P VGE LY+G
Sbjct: 832 QPLANLGLYILDHYLNPVP--VGVVGE-----LYIG 860
|
Length = 3956 |
| >gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 4e-04
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 16/214 (7%)
Query: 351 VYNPVDAVVNILFSSGTTGEPKAIPWTQ--LSSIRCTAEGWAHIDLKVGDVYCWPTNLGW 408
V + D + + F+SGTTG PK + T T W +DL+ D++ + GW
Sbjct: 77 VTSADDPAL-LYFTSGTTGLPKMVLHTHSYPLGHLVTGAYW--LDLRPDDLHWTIADPGW 133
Query: 409 VMGPVI-LFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL 465
G LF+ +L GA + +Y G ER+ ++ GVT P+ + + L
Sbjct: 134 AKGAWSSLFAPWLLGAAVFVYHGRRFDAERTLEL-LERYGVTTFCAPPTAYRMLLQQD-L 191
Query: 466 EGLDWTKIRSFASTGETSNVDD-DLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAF 524
D++ +R S GE N + D W A I + G TE + +
Sbjct: 192 SSYDFSHLRHVVSAGEPLNPEVIDWWR--AATGLPIRDGYGQTE-TGLLVANFPGMEVKP 248
Query: 525 GAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558
G+ + I+D+ G P + G++ +
Sbjct: 249 GSMGRPAPGYRVAIIDDEGNELPPGEE--GDIAV 280
|
MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes. Length = 430 |
| >gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 4e-04
Identities = 70/352 (19%), Positives = 121/352 (34%), Gaps = 85/352 (24%)
Query: 185 HRRKED------NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDA-IA 237
H+ ED VA+V+ E +TY EL + +A+ L + + +
Sbjct: 1577 HQLIEDQAAATPEAVALVFGEQE--------LTYGELNRRANRLAHRLIALGVGPEVLVG 1628
Query: 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 297
I + ++ V+ LAI+ AG V + + +A + S + + TQ + +
Sbjct: 1629 IAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQA---RL 1685
Query: 298 PLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNP-VD 356
PL L+++VL +Q+ W + S + P N
Sbjct: 1686 PL------PDGLRSLVL------------DQEDDWLEGYSDSN---------PAVNLAPQ 1718
Query: 357 AVVNILFSSGTTGEPKA-----------IPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTN 405
+ ++++SG+TG PK + TQ + A+ DV W
Sbjct: 1719 NLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSFAFDVSVWE-- 1776
Query: 406 LGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQ---DAGVTVLGTVPSLVKAW--- 459
LF +NGA L + R + +Q VT L VPS+++
Sbjct: 1777 ---------LFWPLINGARLVIAPPG-AHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQM 1826
Query: 460 --RNTNCLEGLDWTKIRSFASTGETSNVDD-DLWLSSKAWYNAIIESCGGTE 508
+ + +R GE V+ WL + G TE
Sbjct: 1827 DEQVEHP------LSLRRVVCGGEALEVEALRPWLERLPD-TGLFNLYGPTE 1871
|
Length = 3956 |
| >gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 4e-04
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 8/131 (6%)
Query: 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDV-YCWPT-NLGWVMG 411
D + L++SGTTG+PK + + AE +A + L+ GD + + +G
Sbjct: 91 DDIAYWLYTSGTTGKPKGVMHRHRDPL-TFAEAFARELLGLQPGDRIFSSSKLFFAYGLG 149
Query: 412 PVILFSSFLNGATLALYQGSPL-ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDW 470
+LF F GA+ L G P E + TVL VP+L +A + +
Sbjct: 150 NSLLFPLFS-GASAVLLPGWPTPEAVLDLLAR-HRPTVLFGVPALYRALLESGAGSAPLF 207
Query: 471 TKIRSFASTGE 481
+R S GE
Sbjct: 208 RSVRLCVSAGE 218
|
This family contains benzoate CoA ligase (BCL) and related ligases that catalyze the acylation of benzoate derivatives, 2-aminobenzoate and 4-hydroxybenzoate. Aromatic compounds represent the second most abundant class of organic carbon compounds after carbohydrates. Xenobiotic aromatic compounds are also a major class of man-made pollutants. Some bacteria use benzoate as the sole source of carbon and energy through benzoate degradation. Benzoate degradation starts with its activation to benzoyl-CoA by benzoate CoA ligase. The reaction catalyzed by benzoate CoA ligase proceeds via a two-step process; the first ATP-dependent step forms an acyl-AMP intermediate, and the second step forms the acyl-CoA ester with release of the AMP. Length = 436 |
| >gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 4e-04
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 31/192 (16%)
Query: 202 CDESAVNLMTYKELREQVMLVANALDTMFSK--GDAIAIDMPMTVRAVIIYLAIILAGYV 259
C + + ++Y ++R+ V+ AL T SK I I MP + A I Y A +L+G +
Sbjct: 38 CWDEQLGKLSYNQVRKAVI----ALATKVSKYPDQHIGIMMPASAGAYIAYFATLLSGKI 93
Query: 260 VVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---PLKAIVLPA 316
V I S RE+ + + T +++ + G P I +
Sbjct: 94 PVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLA------QTHGEDAEYPFSLIYMEE 147
Query: 317 IGNDVGIPLREQDLSWKD-----FLSSVDYHPRPNYY-SPVYNPVDAVVNILFSSGTTGE 370
+ ++LS+ + S+ + ++ +P D V ILF+SGT
Sbjct: 148 V---------RKELSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAV-ILFTSGTEKL 197
Query: 371 PKAIPWTQLSSI 382
PK +P T + +
Sbjct: 198 PKGVPLTHANLL 209
|
Length = 539 |
| >gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 5e-04
Identities = 45/192 (23%), Positives = 70/192 (36%), Gaps = 21/192 (10%)
Query: 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244
T I E V +Y EL E++ AN ++ KGD +A+ +
Sbjct: 18 DVYGHKTALIF--ESS--GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCP 73
Query: 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL 304
+ + + G ++V I E A L+ S+A + T P+Y ++
Sbjct: 74 EFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFY------PMYRQIQ 127
Query: 305 --GAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNIL 362
A PL+ I L + D F P Y+P + D IL
Sbjct: 128 QEDATPLRHICLTRVALP-------ADDGVSSFTQLKAQQPATLCYAPPLS-TDDTAEIL 179
Query: 363 FSSGTTGEPKAI 374
F+SGTT PK +
Sbjct: 180 FTSGTTSRPKGV 191
|
Length = 517 |
| >gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 6e-04
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 211 TYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
TY EL + +A AL GD +A+ P + V++YLAI AG V V + S+ A
Sbjct: 13 TYGELDARSGRLAKALLALGLLPGDRVAVLAPKSAEYVVLYLAIWRAGGVAVPLNPSYPA 72
Query: 270 REIA 273
E+A
Sbjct: 73 AELA 76
|
MCS catalyzes the formation of malonyl-CoA in a two-step reaction consisting of the adenylation of malonate with ATP, followed by malonyl transfer from malonyl-AMP to CoA. Malonic acid and its derivatives are the building blocks of polyketides and malonyl-CoA serves as the substrate of polyketide synthases. Malonyl-CoA synthetase has broad substrate tolerance and can activate a variety of malonyl acid derivatives. MCS may play an important role in biosynthesis of polyketides, the important secondary metabolites with therapeutic and agrochemical utility. Length = 430 |
| >gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 6e-04
Identities = 55/245 (22%), Positives = 86/245 (35%), Gaps = 50/245 (20%)
Query: 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVIL 415
D IL++SGTTG PK + T + + A +DL GDVY L + P L
Sbjct: 1 DDPALILYTSGTTGRPKGVMLTHRNLLANAVNALAGVDLSPGDVY-----L--LAAP--L 51
Query: 416 FSSFLNGATL-ALYQGSP--LERSFG-----KFVQDAGVTVLGTVPSLVKAWRNTNCLEG 467
+ + L AL G L F ++ VT VP++ +
Sbjct: 52 YHAAGGLFLLPALAAGGTVVLMPKFDPEAVLDLIERHRVTHTFLVPTMFQRLLRLPDFAR 111
Query: 468 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII-ESCGGTELSSAYIQGSLLQPQAF-- 524
D + +R + + +L + W+ + + G TE +LL P+ +
Sbjct: 112 YDLSSLRLIIYGA--APMPAELKRAMIEWFGPVFVQGYGMTETGPT---TTLLSPEDWLR 166
Query: 525 --GAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGM 582
G+ + I+DE G P GEVG E+ RG
Sbjct: 167 KLGSVGRPVPGVEVRIVDEDGRELP-----PGEVG------------------EIVVRGP 203
Query: 583 PMYKG 587
+ G
Sbjct: 204 AVMAG 208
|
Bile acid-Coenzyme A ligase catalyzes the formation of bile acid-CoA conjugates in a two-step reaction: the formation of a bile acid-AMP molecule as an intermediate, followed by the formation of a bile acid-CoA. This ligase requires a bile acid with a free carboxyl group, ATP, Mg2+, and CoA for synthesis of the final bile acid-CoA conjugate. The bile acid-CoA ligation is believed to be the initial step in the bile acid 7alpha-dehydroxylation pathway in the intestinal bacterium Eubacterium sp. Length = 342 |
| >gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 8e-04
Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 20/169 (11%)
Query: 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
TY E+ A AL ++ KG + + +P I+ L I+ AG V +
Sbjct: 57 TYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALE 116
Query: 270 REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQD 329
EI + + AK I T D Y KV G L IVL E
Sbjct: 117 SEIKKQAEAAGAKLIVTNDT---------NYGKVKGLG-LPVIVLGEEKI-------EGA 159
Query: 330 LSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ 378
++WK+ L + D + + + + FSSGTTG K + T
Sbjct: 160 VNWKELLEAADRAGDTSDNEEILQ--TDLCALPFSSGTTGISKGVMLTH 206
|
Length = 546 |
| >gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 8e-04
Identities = 44/166 (26%), Positives = 60/166 (36%), Gaps = 25/166 (15%)
Query: 210 MTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY ELR +V VA L +A+ P +V AVI LA+ G V +
Sbjct: 29 LTYSELRARVEGVAARLHARGVRPQQRVAVVAPNSVDAVIALLALHRLGAVPALMNPRLK 88
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
EIA + I RG + + V+ A V+ AI G +R
Sbjct: 89 PAEIA--------------ELIKRG----EMTAAVIAVD---AQVMDAI-FQSGSGVRVL 126
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAI 374
L L P P P + ++SGTTG PK
Sbjct: 127 ALGDLVGL-GEPESAGPPIEDPPREPEQPAF-VFYTSGTTGLPKGA 170
|
CBAL catalyzes the conversion of 4-chlorobenzoate (4-CB) to 4-chlorobenzoyl-coenzyme A (4-CB-CoA) by the two-step adenylation and thioester-forming reactions. 4-Chlorobenzoate (4-CBA) is an environmental pollutant derived from microbial breakdown of aromatic pollutants, such as polychlorinated biphenyls (PCBs), DDT, and certain herbicides. The 4-CBA degrading pathway converts 4-CBA to the metabolite 4-hydroxybezoate (4-HBA), allowing some soil-dwelling microbes to utilize 4-CBA as an alternate carbon source. This pathway consists of three chemical steps catalyzed by 4-CBA-CoA ligase, 4-CBA-CoA dehalogenase, and 4HBA-CoA thioesterase in sequential reactions. Length = 495 |
| >gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) | Back alignment and domain information |
|---|
Score = 41.3 bits (98), Expect = 0.001
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 191 NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMF-SKGDAIAIDMPMTVRAVII 249
+ VA+V+ + +TY+EL E+ +A+ L GD +AI + + V+
Sbjct: 2 DAVAVVFGDQS--------LTYRELNERANRLAHYLRARGVGPGDLVAICLERSPEMVVA 53
Query: 250 YLAIILAG--YVVVSIADSFAAREIATRLRVSKAKGIFTQ 287
LA++ AG YV + A A R +A L S AK + T
Sbjct: 54 ILAVLKAGAAYVPLDPAYP-AER-LAYMLEDSGAKLLLTD 91
|
The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. Length = 445 |
| >gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAG--YVVVSIADS 266
+TY E E+V +A AL S + I ++ ++ LA + AG Y VS A S
Sbjct: 70 LTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPVSPAYS 129
Query: 267 FAAREIATRLR----VSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG 322
+++ +LR + +F D +++ L A + + A+ V
Sbjct: 130 LVSQDFG-KLRHVLELLTPGLVFADDG--------AAFARALAAVVPADVEVVAVRGAVP 180
Query: 323 IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPV--DAVVNILFSSGTTGEPKAIPWTQ 378
+ L++ P + V D + LF+SG+TG PKA+ T
Sbjct: 181 GR---AATPFAALLAT----PPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTH 231
|
Length = 614 |
| >gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.002
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269
TY EL E+V +A L + GD +A+ + + + A+ G V V I +
Sbjct: 5 TYAELAERVNRLAAGLLALGVRPGDRVALMLDNCPEFLRAWFALNKLGAVAVPINTALRG 64
Query: 270 REIATRLRVSKAKGIFT 286
E+A L S A+ I
Sbjct: 65 EELAHILDHSGARLIVV 81
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Members of this family include DitJ from Pseudomonas and similar proteins. Length = 421 |
| >gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.002
Identities = 64/270 (23%), Positives = 105/270 (38%), Gaps = 45/270 (16%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAG--YVVVSIADS 266
+TY E QV +A AL + S + I ++ ++ LA + AG VS A S
Sbjct: 26 VTYAEALRQVRAIAQALLDLGLSAERPLMILSGNSIEHALLALAAMYAGVPVAPVSPAYS 85
Query: 267 FAAREIATRLR----VSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG 322
+++ A +LR + +F +D +++ L A L + + A+ G
Sbjct: 86 LLSKDFA-KLRHIFDLLTPGAVFAEDG--------AAFARALAALGLAGVPVVAVRGAPG 136
Query: 323 IP--LREQDLSWKDFLSSVDYHPRPNYYSPVYNPV--DAVVNILFSSGTTGEPKAIPWTQ 378
P L+ P + V D V LF+SG+TG PKA+ T
Sbjct: 137 GPAIAFAALLA----------TPPTAAVDAAFAAVGPDTVAKYLFTSGSTGLPKAVINTH 186
Query: 379 L---SSIRCTAEGWAHIDLKVGDVYCWPTNLGW--VMGPVILFSSFL-NGATLALYQGSP 432
++ A+ W + + + W L W G F+ L NG TL + G P
Sbjct: 187 RMLCANQAMIAQCWPFLTEEPPVLVDW---LPWNHTFGGNHNFNMVLYNGGTLYIDDGKP 243
Query: 433 LERSFGKFVQ---DAGVTVLGTVPSLVKAW 459
+ F + ++ + TV VP K +
Sbjct: 244 VPGLFEETLRNLREVSPTVYFNVP---KGF 270
|
Feruloyl-CoA synthetase is an essential enzyme in the feruloyl acid degradation pathway and enables some proteobacteria to grow on media containing feruloyl acid as the sole carbon source. It catalyzes the transfer of CoA to the carboxyl group of ferulic acid, which then forms feruloyl-CoA in the presence of ATP and Mg2. The resulting feruloyl-CoA is further degraded to vanillin and acetyl-CoA. Feruloyl-CoA synthetase (FCS) is a subfamily of the adenylate-forming enzymes superfamily. Length = 559 |
| >gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 46/193 (23%), Positives = 75/193 (38%), Gaps = 43/193 (22%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
TY EL +QV A L + GD +AI +P + ++ + A++ G VVV +
Sbjct: 58 TTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYT 117
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV-------LPAIGN-D 320
A E+ A+ D + P ++ PL+ IV +P +
Sbjct: 118 AHELEHPFEDHGARVAIVWD------KVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLA 171
Query: 321 VGIPL------REQ-------DLSWKDFLSS-------VDYHPRPNYYSPVYNPVDAVVN 360
+ +P+ R + W+ + + HPRP D V
Sbjct: 172 LRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPT--------PDDVAL 223
Query: 361 ILFSSGTTGEPKA 373
IL++SGTTG+PK
Sbjct: 224 ILYTSGTTGKPKG 236
|
Length = 573 |
| >gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 210 MTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY EL E V +A L + KGD +A+ M + + VI Y AI+ AG VVV +
Sbjct: 2 ITYAELLELVDRLAGLLQEKGVRKGDRVALYMQNSPQFVIAYYAILRAGAVVVPVNPMNR 61
Query: 269 AREIATRLRVSKAKGIFTQD 288
E+ L S A+ +
Sbjct: 62 EAELEHILNDSGARVLIVGS 81
|
The members of this family are putative long-chain fatty acyl-CoA synthetases, which catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. Fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. Length = 430 |
| >gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 83/346 (23%), Positives = 123/346 (35%), Gaps = 48/346 (13%)
Query: 233 GDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILR 292
GD +A+ M V+ LA A VVV + + E R + + A+ + D
Sbjct: 68 GDRVALRMGSNAEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLI-DADGP 126
Query: 293 GGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV- 351
R P PL V G G D P P +P
Sbjct: 127 HDRAEPTTR----WWPLTVNVGGDSGPSGGTLSVHLD---------AATEPTPATSTPEG 173
Query: 352 YNPVDAVVNILFSSGTTGEPKAIPWTQ---LSSIRCTAEGWAHIDLKVGD--VYCWPTNL 406
P DA+ I+F+ GTTG PK +PWT SS+R G+ L D V P
Sbjct: 174 LRPDDAM--IMFTGGTTGLPKMVPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYH 228
Query: 407 GWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE 466
G + +L + GA L +G +F ++ G T VP++ + E
Sbjct: 229 GHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATE 288
Query: 467 GLDWTK-----IRSFAS--TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL 519
IRS ++ T ET+ + + ++ + G TE A Q +
Sbjct: 289 PSGRKPAALRFIRSCSAPLTAETAQALQTEFAA------PVVCAFGMTE---ATHQVTTT 339
Query: 520 QPQAFGAFSTATMTAGLVILD---ECGVPYPDDQPC----VGEVGL 558
Q + G ++ GLV + + D P VGEV L
Sbjct: 340 QIEGIGQTENPVVSTGLVGRSTGAQIRIVGSDGLPLPAGAVGEVWL 385
|
Length = 534 |
| >gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.003
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 47/190 (24%)
Query: 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR 245
+ + + A + ++ +TY +L+E +A +D++ I + M+
Sbjct: 13 QTQPDFPAYDYLGEK--------LTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE 64
Query: 246 AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYS---K 302
+ +L + AG+ + + S A I + V+K I + + PL
Sbjct: 65 MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATE-------ELPLEILGIP 117
Query: 303 VLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNIL 362
V+ LK I D ++ D NYY I+
Sbjct: 118 VITLDELKDIFATGNPYDFDHAVKGDD----------------NYY------------II 149
Query: 363 FSSGTTGEPK 372
F+SGTTG+PK
Sbjct: 150 FTSGTTGKPK 159
|
Length = 503 |
| >gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 12/168 (7%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
++ EL ++ A L + GD +A+ M A + G V + F
Sbjct: 12 RSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFK 71
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRK-FPLYSKVLGAAPLKAIVLPAIG-NDVGIPLR 326
EIA L S A+ + +L G P VL + P + A + +
Sbjct: 72 PEEIAYILEDSGARVLIAHADLLHGLASALPAGVTVL-SVPTPPEIAAAYRISPALLTPP 130
Query: 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAI 374
+ W+ +L+ + Y P PV +++++SGTTG PK +
Sbjct: 131 AGAIDWEGWLAQ-----QEPYDGP---PVPQPQSMIYTSGTTGHPKGV 170
|
Length = 509 |
| >gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 33/198 (16%)
Query: 221 LVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSK 280
L A+ + +K D +++ P T ++ A+ +AG V+ I A IA LR +K
Sbjct: 52 LAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAK 111
Query: 281 AKGIFTQDFILRGGRKF-PLYSKVLGAAPLKAIVLPAIGNDVGIP---LREQDLSWKDFL 336
K +F R F PL +VL +L + +++ +P + E D +
Sbjct: 112 PKILFVD-------RSFEPLAREVLH-------LLSSEDSNLNLPVIFIHEIDFPKRPSS 157
Query: 337 SSVDY-------HPRPNYYSPVYNPVDA--VVNILFSSGTTGEPKAIPWTQLSSIRCTAE 387
+DY P P+ + ++ D +++ ++SGTT +PK + + + T
Sbjct: 158 EELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLS 217
Query: 388 ---GWAHIDLKVGDVYCW 402
GW ++ VY W
Sbjct: 218 AIIGW---EMGTCPVYLW 232
|
Length = 579 |
| >gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.004
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 18/107 (16%)
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-------- 412
IL++SGTTG PK + T + + L+ DV P
Sbjct: 86 ILYTSGTTGPPKGVLLTHAQLLFAARLAARLLGLRPDDVL-------LTPLPLFHINAQA 138
Query: 413 VILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKA 458
++++ L GATL L S F V+ G TV + ++
Sbjct: 139 YSVYAALLVGATLVLLPRFSA--SRFWDQVRKHGATVFNLLGAMAAI 183
|
Fatty acyl-CoA ligases catalyze the ATP-dependent activation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Members of this family include DitJ from Pseudomonas and similar proteins. Length = 421 |
| >gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.004
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKVGDVYCWPTNLGW----- 408
+D I+F+SG+TG+PKA+ T + +A G A ++ L D W L
Sbjct: 76 LDRPATIIFTSGSTGKPKAVVHT-WGNHLASARGSAENLGLTPDD--NW---LLSLPLFH 129
Query: 409 VMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP 453
V G I+ S L G L L E + +++ GVT + VP
Sbjct: 130 VSGLAIVMRSLLAGGALVLPDKFDAEAI-AEALENHGVTHISLVP 173
|
O-succinylbenzoic acid-CoA synthase catalyzes the coenzyme A (CoA)- and ATP-dependent conversion of o-succinylbenzoic acid to o-succinylbenzoyl-CoA. The reaction is the fourth step of the biosynthesis pathway of menaquinone (vitamin K2). In certain bacteria, menaquinone is used during fumarate reduction in anaerobic respiration. In cyanobacteria, the product of the menaquinone pathway is phylloquinone (2-methyl-3-phytyl-1,4-naphthoquinone), a molecule used exclusively as an electron transfer cofactor in Photosystem 1. In green sulfur bacteria and heliobacteria, menaquinones are used as loosely bound secondary electron acceptors in the photosynthetic reaction center. Length = 407 |
| >gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 30/197 (15%)
Query: 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR 245
+E + +A++W +D +E + T+ +L++ AN + KGD + +T++
Sbjct: 28 DEEPDKLALIWCDDDGEEK---IFTFGDLKDYSNKAANFFKALGIGKGDTVM----LTLK 80
Query: 246 AVIIYLAIILA----GYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYS 301
+ +LA G + + A++I R+ + K I + G P +
Sbjct: 81 RRYEFWFSMLALHKIGAIAIPATHMLTAKDIVYRIEAAGIKMI-----VCIGEDGVPEH- 134
Query: 302 KVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVD----YHPRPNYYSPVYNPVDA 357
+ AAP + VG P+ E W DF ++ RP D
Sbjct: 135 -IDEAAPECGSPTLLV--LVGDPVPE---GWIDFDKEIENASPDFERPT--GNDATCNDD 186
Query: 358 VVNILFSSGTTGEPKAI 374
++ + F+SGTTG PK +
Sbjct: 187 ILLVYFTSGTTGMPKMV 203
|
MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. This family of MACS enzymes is found in archaea and bacteria. It is represented by the acyl-adenylating enzyme from Methanosarcina acetivorans (AAE_MA). AAE_MA is most active with propionate, butyrate, and the branched analogs: 2-methyl-propionate, butyrate, and pentanoate. The specific activity is weaker for smaller or larger acids. Length = 537 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 592 | |||
| PLN03052 | 728 | acetate--CoA ligase; Provisional | 100.0 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 100.0 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 100.0 | |
| COG0365 | 528 | Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l | 100.0 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 100.0 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 100.0 | |
| PRK05691 | 4334 | peptide synthase; Validated | 100.0 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 100.0 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 100.0 | |
| PRK05691 | 4334 | peptide synthase; Validated | 100.0 | |
| PTZ00237 | 647 | acetyl-CoA synthetase; Provisional | 100.0 | |
| PLN02654 | 666 | acetate-CoA ligase | 100.0 | |
| TIGR02188 | 625 | Ac_CoA_lig_AcsA acetate--CoA ligase. This model de | 100.0 | |
| TIGR02316 | 628 | propion_prpE propionate--CoA ligase. This family c | 100.0 | |
| PRK03584 | 655 | acetoacetyl-CoA synthetase; Provisional | 100.0 | |
| PRK00174 | 637 | acetyl-CoA synthetase; Provisional | 100.0 | |
| TIGR01217 | 652 | ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym | 100.0 | |
| PRK10524 | 629 | prpE propionyl-CoA synthetase; Provisional | 100.0 | |
| KOG1175 | 626 | consensus Acyl-CoA synthetase [Lipid transport and | 100.0 | |
| COG1020 | 642 | EntF Non-ribosomal peptide synthetase modules and | 100.0 | |
| KOG1176 | 537 | consensus Acyl-CoA synthetase [Lipid transport and | 100.0 | |
| PLN02614 | 666 | long-chain acyl-CoA synthetase | 100.0 | |
| PRK07788 | 549 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK04319 | 570 | acetyl-CoA synthetase; Provisional | 100.0 | |
| COG0318 | 534 | CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l | 100.0 | |
| PRK06334 | 539 | long chain fatty acid--[acyl-carrier-protein] liga | 100.0 | |
| KOG1177 | 596 | consensus Long chain fatty acid acyl-CoA ligase [L | 100.0 | |
| PLN02736 | 651 | long-chain acyl-CoA synthetase | 100.0 | |
| PLN02861 | 660 | long-chain-fatty-acid-CoA ligase | 100.0 | |
| PTZ00342 | 746 | acyl-CoA synthetase; Provisional | 100.0 | |
| PLN02860 | 563 | o-succinylbenzoate-CoA ligase | 100.0 | |
| PRK06060 | 705 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK13295 | 547 | cyclohexanecarboxylate-CoA ligase; Reviewed | 100.0 | |
| PRK07529 | 632 | AMP-binding domain protein; Validated | 100.0 | |
| PRK13382 | 537 | acyl-CoA synthetase; Provisional | 100.0 | |
| PLN02246 | 537 | 4-coumarate--CoA ligase | 100.0 | |
| PLN02574 | 560 | 4-coumarate--CoA ligase-like | 100.0 | |
| COG1022 | 613 | FAA1 Long-chain acyl-CoA synthetases (AMP-forming) | 100.0 | |
| PTZ00216 | 700 | acyl-CoA synthetase; Provisional | 100.0 | |
| PF00501 | 417 | AMP-binding: AMP-binding enzyme; InterPro: IPR0008 | 100.0 | |
| PRK07656 | 513 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK05677 | 562 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK07638 | 487 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08180 | 614 | feruloyl-CoA synthase; Reviewed | 100.0 | |
| TIGR03098 | 515 | ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor | 100.0 | |
| PRK08314 | 546 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PLN02387 | 696 | long-chain-fatty-acid-CoA ligase family protein | 100.0 | |
| PLN02430 | 660 | long-chain-fatty-acid-CoA ligase | 100.0 | |
| TIGR03208 | 538 | cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. | 100.0 | |
| PRK09274 | 552 | peptide synthase; Provisional | 100.0 | |
| PRK03640 | 483 | O-succinylbenzoic acid--CoA ligase; Provisional | 100.0 | |
| PRK08315 | 559 | AMP-binding domain protein; Validated | 100.0 | |
| PRK06839 | 496 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06187 | 521 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| TIGR02275 | 527 | DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot | 100.0 | |
| PRK12583 | 558 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK07769 | 631 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK12582 | 624 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK07786 | 542 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PLN02330 | 546 | 4-coumarate--CoA ligase-like 1 | 100.0 | |
| PRK08316 | 523 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06145 | 497 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK12492 | 562 | long-chain-fatty-acid--CoA ligase; Provisional | 100.0 | |
| PRK12476 | 612 | putative fatty-acid--CoA ligase; Provisional | 100.0 | |
| TIGR02262 | 508 | benz_CoA_lig benzoate-CoA ligase family. Character | 100.0 | |
| KOG1256 | 691 | consensus Long-chain acyl-CoA synthetases (AMP-for | 100.0 | |
| PRK06087 | 547 | short chain acyl-CoA synthetase; Reviewed | 100.0 | |
| PRK05605 | 573 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK05857 | 540 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06155 | 542 | crotonobetaine/carnitine-CoA ligase; Provisional | 100.0 | |
| PRK05851 | 525 | long-chain-fatty-acid--[acyl-carrier-protein] liga | 100.0 | |
| PLN03051 | 499 | acyl-activating enzyme; Provisional | 100.0 | |
| PRK07470 | 528 | acyl-CoA synthetase; Validated | 100.0 | |
| TIGR01734 | 502 | D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig | 100.0 | |
| PRK08008 | 517 | caiC putative crotonobetaine/carnitine-CoA ligase; | 100.0 | |
| PRK07008 | 539 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK07514 | 504 | malonyl-CoA synthase; Validated | 100.0 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 100.0 | |
| PRK09088 | 488 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK05852 | 534 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK10946 | 536 | entE enterobactin synthase subunit E; Provisional | 100.0 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 100.0 | |
| PRK07059 | 557 | Long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| TIGR03205 | 541 | pimA dicarboxylate--CoA ligase PimA. PimA, a membe | 100.0 | |
| PRK08751 | 560 | putative long-chain fatty acyl CoA ligase; Provisi | 100.0 | |
| PRK06188 | 524 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK07787 | 471 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK13390 | 501 | acyl-CoA synthetase; Provisional | 100.0 | |
| PLN03102 | 579 | acyl-activating enzyme; Provisional | 100.0 | |
| COG1021 | 542 | EntE Peptide arylation enzymes [Secondary metaboli | 100.0 | |
| PRK04813 | 503 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| PRK05620 | 576 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK06018 | 542 | putative acyl-CoA synthetase; Provisional | 100.0 | |
| PRK06164 | 540 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK13383 | 516 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK13388 | 540 | acyl-CoA synthetase; Provisional | 100.0 | |
| PRK06710 | 563 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK08974 | 560 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK07798 | 533 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK06178 | 567 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08279 | 600 | long-chain-acyl-CoA synthetase; Validated | 100.0 | |
| PRK07867 | 529 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK12406 | 509 | long-chain-fatty-acid--CoA ligase; Provisional | 100.0 | |
| PRK13391 | 511 | acyl-CoA synthetase; Provisional | 100.0 | |
| TIGR01733 | 408 | AA-adenyl-dom amino acid adenylation domain. This | 100.0 | |
| PLN02479 | 567 | acetate-CoA ligase | 100.0 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK08276 | 502 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 100.0 | |
| PRK08162 | 545 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK09192 | 579 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK05850 | 578 | acyl-CoA synthetase; Validated | 100.0 | |
| PRK07768 | 545 | long-chain-fatty-acid--CoA ligase; Validated | 100.0 | |
| PRK09029 | 458 | O-succinylbenzoic acid--CoA ligase; Provisional | 100.0 | |
| TIGR01923 | 436 | menE O-succinylbenzoate-CoA ligase. This model rep | 100.0 | |
| PRK07445 | 452 | O-succinylbenzoic acid--CoA ligase; Reviewed | 100.0 | |
| PRK08308 | 414 | acyl-CoA synthetase; Validated | 100.0 | |
| KOG1180 | 678 | consensus Acyl-CoA synthetase [Lipid transport and | 100.0 | |
| KOG1179 | 649 | consensus Very long-chain acyl-CoA synthetase/fatt | 100.0 | |
| PTZ00297 | 1452 | pantothenate kinase; Provisional | 100.0 | |
| TIGR03089 | 227 | conserved hypothetical protein TIGR03089. This pro | 99.94 | |
| PRK07824 | 358 | O-succinylbenzoic acid--CoA ligase; Provisional | 99.92 | |
| TIGR02155 | 422 | PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet | 99.87 | |
| TIGR02372 | 386 | 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv | 99.86 | |
| TIGR03335 | 445 | F390_ftsA coenzyme F390 synthetase. This enzyme, c | 99.84 | |
| KOG3628 | 1363 | consensus Predicted AMP-binding protein [General f | 99.81 | |
| KOG1178 | 1032 | consensus Non-ribosomal peptide synthetase/alpha-a | 99.78 | |
| COG1541 | 438 | PaaK Coenzyme F390 synthetase [Coenzyme metabolism | 99.52 | |
| TIGR02304 | 430 | aden_form_hyp probable adenylate-forming enzyme. M | 99.1 | |
| PF13745 | 91 | HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A. | 99.08 | |
| KOG3628 | 1363 | consensus Predicted AMP-binding protein [General f | 99.03 | |
| PF04443 | 365 | LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR | 98.34 | |
| COG1541 | 438 | PaaK Coenzyme F390 synthetase [Coenzyme metabolism | 93.5 |
| >PLN03052 acetate--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-73 Score=637.78 Aligned_cols=588 Identities=61% Similarity=1.070 Sum_probs=483.3
Q ss_pred CCCcccccchhHHHhhCCChhHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccC
Q 007715 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIK 80 (592)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~ 80 (592)
|||.+.++.+++|..+.+..++++.|.+.|+++...... +-..+.-.. ..+.|+|..+.+.|++-.+.++=+|.....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (728)
T PLN03052 4 AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAGA-SPPSIWRRI-SQSLLTPSHPFALHQLMYYSCYKNWDSDTL 81 (728)
T ss_pred ccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhcC-CchHHHHHH-HHHhcCCCCCccHHHHhhhhcccCCCcccc
Confidence 689999999999999999999999999999999976653 556677776 788999999988888877777778876665
Q ss_pred CCCCCcCCCccccccccHHHHHHHhCCccccccCCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCC
Q 007715 81 GPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK 160 (592)
Q Consensus 81 ~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 160 (592)
.+...|.|+.+....+.+..+++..+.......|...+.+|+.|++++++++..||..+++.+.+.|++++.++++..+.
T Consensus 82 ~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~ 161 (728)
T PLN03052 82 GPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDE 161 (728)
T ss_pred CCCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCCC
Confidence 56689999988888899988887765443333366667789999999999999999999999988999999998865323
Q ss_pred CCCCCccCCCCcchhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 007715 161 SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239 (592)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~ 239 (592)
..+..+|++++.+|++++|++++. +++||++|+++.+++.++++.+++||+||+++++++|++|+++ +++||+|+++
T Consensus 162 ~~~~~~wf~g~~ln~~~~~l~~~~--~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~ 239 (728)
T PLN03052 162 SNPGGQWLPGAVLNVAECCLTPKP--SKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239 (728)
T ss_pred CCCCCEECCCCEeEHHHHHHHHHh--ccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 445678999999999999998865 5789999999977532234567899999999999999999999 9999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCC
Q 007715 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (592)
Q Consensus 240 ~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 319 (592)
++|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++.+.++++.++....+.+.....++++...+.
T Consensus 240 ~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~ 319 (728)
T PLN03052 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGK 319 (728)
T ss_pred eCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999998877778777777776655555566554321
Q ss_pred CCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCE
Q 007715 320 DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDV 399 (592)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 399 (592)
............|++++.................++++++||+|||||||+||||+++|++++..+......++++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~ 399 (728)
T PLN03052 320 SVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDI 399 (728)
T ss_pred ccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcE
Confidence 11111112345677776532210001112222335689999999999999999999999998777766666688999999
Q ss_pred EEEecccchhchhHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEe
Q 007715 400 YCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (592)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~g 479 (592)
+++.++++|+++.+.++.+|++|++++++++.+++..++++|++++||++.++|++++.|.+.......++++||.+++|
T Consensus 400 ~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~ 479 (728)
T PLN03052 400 VCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479 (728)
T ss_pred EEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence 99999999999998889999999999999877777889999999999999999999999988765556789999999999
Q ss_pred cCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEEe
Q 007715 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (592)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v~ 559 (592)
||+++++...|+...++..+++|.||+||++++++...+..+...+++|+|++|++++|+|++|+++|.|++++|||++.
T Consensus 480 Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~ 559 (728)
T PLN03052 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALF 559 (728)
T ss_pred CCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEe
Confidence 99999999888887765567999999999986555444444556789999999999999999999999997557999997
Q ss_pred cccCCCchhhccccccccccccCcCCcc---eeccC
Q 007715 560 PLYLGASDRLLNADHEEVYFRGMPMYKG---MVHVD 592 (592)
Q Consensus 560 ~gY~~~~~~~~~~~~~~~~f~~~~~~~g---y~~~d 592 (592)
+.+++.+..+++.+....||.++|...| |+|||
T Consensus 560 ~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGD 595 (728)
T PLN03052 560 PLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGD 595 (728)
T ss_pred CCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCc
Confidence 7777766666666666778887775555 78887
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-67 Score=668.83 Aligned_cols=532 Identities=17% Similarity=0.157 Sum_probs=418.5
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCC-----C
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP-----L 84 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~-----~ 84 (592)
-+.+|+|+.++...+|.++|++++++..++ +||++||++ |++.|++.|.. ++.||||+||++++...... .
T Consensus 1404 vNtlplR~~~~~~~t~~~~l~~v~~~~~~a~~hq~~p~~~-i~~~l~~~r~~--~~~pLFq~~~~~~~~~~~~~~~~~~~ 1480 (3956)
T PRK12467 1404 VNTQVLRAEVDGQASFQQLLQQVKQAALEAQAHQDLPFEQ-LVEALQPERSL--SHSPLFQVMFNHQRDDHQAQAQLPGL 1480 (3956)
T ss_pred eeeeEEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHHHhcccccC--CCCCceeEEEEeecccccccccCCCc
Confidence 367899999999999999999999998877 999999999 99999988884 45566999999987543221 1
Q ss_pred C--cCCCccccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc--ccCCC
Q 007715 85 Y--WFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTD 159 (592)
Q Consensus 85 ~--~~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~ 159 (592)
. .........++||++.+.+.++++.+.+ |+. ++|++.+++++.++|.++|+++..+++.+...+ +...+
T Consensus 1481 ~~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~l~~~~~~~ 1555 (3956)
T PRK12467 1481 SVESLSWESQTAQFDLTLDTYESSEGLQASLTYAT-----DLFEASTIERLAGHWLNLLQGLVADPERRLGELDLLDEAE 1555 (3956)
T ss_pred eeEeeecCCcccccceEEEEEecCCeEEEEEEEeC-----CcCCHHHHHHHHHHHHHHHHHHhhCccCceeeccccchHH
Confidence 1 1111235678999999888778888888 998 999999999999999999999987776665553 33333
Q ss_pred CCCCCCccCCCCcchhhhhhccc--cccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEE
Q 007715 160 KSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAI 236 (592)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V 236 (592)
.......|+.+........+++. ..+++++||++|+++.++ .+||+||+++++++|+.|+++ +++|++|
T Consensus 1556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V 1627 (3956)
T PRK12467 1556 RRQILEGWNATHTGYPLARLVHQLIEDQAAATPEAVALVFGEQ--------ELTYGELNRRANRLAHRLIALGVGPEVLV 1627 (3956)
T ss_pred hhhhHHhhcCCccCCCccccHHHHHHHHHHhCCCCeEEEeCCc--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 33333446544332221222222 124589999999999877 999999999999999999999 9999999
Q ss_pred EEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcC
Q 007715 237 AIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPA 316 (592)
Q Consensus 237 ~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 316 (592)
+|+++|++++++++|||+|+|++||||||.+|.+|+.+++++++++++|++..... .+........+.+..
T Consensus 1628 ~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~ 1698 (3956)
T PRK12467 1628 GIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQA---------RLPLPDGLRSLVLDQ 1698 (3956)
T ss_pred EEEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhh---------hCccccCCcEEEecc
Confidence 99999999999999999999999999999999999999999999999999875321 110000111222211
Q ss_pred CCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCC
Q 007715 317 IGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV 396 (592)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~ 396 (592)
. .+...... ...+.....++++|||+|||||||+||||+++|+++++.+.+....+++++
T Consensus 1699 ~---------------~~~~~~~~-----~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~ 1758 (3956)
T PRK12467 1699 E---------------DDWLEGYS-----DSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSA 1758 (3956)
T ss_pred c---------------cchhccCC-----CCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCc
Confidence 0 00001110 111223446789999999999999999999999999999998888899999
Q ss_pred CCEEEEecccchhchhHHHHHHHHcCCEEEEeCC--CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCcccc
Q 007715 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIR 474 (592)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~--~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr 474 (592)
+|++++.+|++||.+++++|.+|++|+++++.+. ..++..+++.|++++||++.++|++++.|.+... ....+++||
T Consensus 1759 ~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr 1837 (3956)
T PRK12467 1759 ADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLR 1837 (3956)
T ss_pred ccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCce
Confidence 9999999999999999999999999999999864 2478899999999999999999999999987432 234578999
Q ss_pred EEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcC----CCCccCcccccCCCceEEEECCCCCCCCCCC
Q 007715 475 SFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQ 550 (592)
Q Consensus 475 ~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~ 550 (592)
.+++|||++++++.+++.+.+++.+++|.||+||+++.++..... ......+||+|++|++++|+|++++++|+|+
T Consensus 1838 ~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~vp~G~ 1917 (3956)
T PRK12467 1838 RVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNPVPIGV 1917 (3956)
T ss_pred EEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCCCCCCCCC
Confidence 999999999999999888887777899999999998765433221 1123578999999999999999999999999
Q ss_pred CcceeEEE-----ecccCCCchhhccccccccccccCcCCcceeccC
Q 007715 551 PCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMVHVD 592 (592)
Q Consensus 551 ~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~~gy~~~d 592 (592)
+ ||||| ++||+|+|+.|.+ .+....|. .++-+.|+|||
T Consensus 1918 ~--GEl~i~G~~v~~GYl~~p~~t~~-~f~~~p~~-~~~~r~yrTGD 1960 (3956)
T PRK12467 1918 A--GELYLGGVGLARGYLNRPALTAE-RFVADPFG-TVGSRLYRTGD 1960 (3956)
T ss_pred c--eEEEeccccccccccCChhhhhh-hCcCCCCC-CCCccceeccc
Confidence 5 99999 8999999998733 33222232 13445677777
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-65 Score=654.44 Aligned_cols=524 Identities=13% Similarity=0.099 Sum_probs=411.0
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCC------
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP------ 83 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~------ 83 (592)
.+.+|+|+.++...+|.++|++++++..++ +||++||++ |++.++..+ + ||||+||+++|.+....
T Consensus 2928 intlp~r~~~~~~~~~~~~l~~v~~~~~~~~~h~~~~~~~-i~~~~~~~~----~--~lf~~~~~~~~~~~~~~~~~~~~ 3000 (3956)
T PRK12467 2928 INTLPVIASPRAEQTVSDWLQQVQAQNLALREFEHTPLAD-IQRWAGQGG----E--ALFDSILVFENYPISEALKQGAP 3000 (3956)
T ss_pred eeceeEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHHhhccCC----C--CCcceEEEeecCCchhhhhccCC
Confidence 368899999999999999999999998877 999999999 999986322 2 66999999998653211
Q ss_pred --CCcCC-CccccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc--ccC
Q 007715 84 --LYWFP-SLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDR 157 (592)
Q Consensus 84 --~~~~~-~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~~ 157 (592)
....+ ......+|+|++.+.. ++++.+.+ |+. ++|+..+++++.++|.++|+++...++.+...+ +..
T Consensus 3001 ~~~~~~~~~~~~~~~~~l~l~~~~-~~~~~~~~~y~~-----~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~l~~l~~ 3074 (3956)
T PRK12467 3001 SGLRFGAVSSREQTNYPLTLAVGL-GDTLELEFSYDR-----QHFDAAAIERLAESFDRLLQAMLNNPAARLGELPTLAA 3074 (3956)
T ss_pred CCceeecccccccccCceEEEecc-CcceeEEEEech-----hhCCHHHHHHHHHHHHHHHHHHHhCcCCchhhccCCCH
Confidence 01111 1134467888887764 55778888 987 999999999999999999999987666655443 222
Q ss_pred CCCCCCCCccCCCCcchhhhhhccc--cccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCC
Q 007715 158 TDKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGD 234 (592)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd 234 (592)
.+.......|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|+.|+++ +++|+
T Consensus 3075 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~gv~~g~ 3146 (3956)
T PRK12467 3075 HERRQVLHAWNATAAAYPSERLVHQLIEAQVARTPEAPALVFGDQ--------QLSYAELNRRANRLAHRLIAIGVGPDV 3146 (3956)
T ss_pred HHHHHHHHhhccCCCCCCccccHHHHHHHHHHhCCCcceEeeCCc--------ccCHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 2222223456654332222222322 225689999999999887 999999999999999999999 99999
Q ss_pred EEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEE
Q 007715 235 AIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVL 314 (592)
Q Consensus 235 ~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 314 (592)
+|+|+++|++++++++|||+|+|++||||||.+|.+|+.++++++++++||+++.... .+........+.+
T Consensus 3147 ~V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~---------~~~~~~~~~~~~~ 3217 (3956)
T PRK12467 3147 LVGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLE---------QLPAPAGDTALTL 3217 (3956)
T ss_pred eEEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhh---------hcccccCCceeee
Confidence 9999999999999999999999999999999999999999999999999999875321 1100001111111
Q ss_pred cCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCC
Q 007715 315 PAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL 394 (592)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~ 394 (592)
.. ...... ....+.....++++|||+|||||||+||||+++|+++.+.+.+....+++
T Consensus 3218 ~~------------------~~~~~~----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~ 3275 (3956)
T PRK12467 3218 DR------------------LDLNGY----SENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYEL 3275 (3956)
T ss_pred cc------------------hhhccc----CCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCC
Confidence 10 000000 01112234567999999999999999999999999999999988889999
Q ss_pred CCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCC-CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccc
Q 007715 395 KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473 (592)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sL 473 (592)
+++|++++++|++|+.+.++++.+|+.|+++++.++ ..++..+++.|++++||++.++|++++.|.+... ..++++|
T Consensus 3276 ~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~l 3353 (3956)
T PRK12467 3276 DANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASL 3353 (3956)
T ss_pred CcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCc
Confidence 999999999999999999999999999999999873 2588999999999999999999999999986532 3457899
Q ss_pred cEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCC----CCccCcccccCCCceEEEECCCCCCCCCC
Q 007715 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGVPYPDD 549 (592)
Q Consensus 474 r~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~v~IlD~~g~~vp~G 549 (592)
|.+++|||++++++.+++...+++++++|.||+||+++.++...... .....+||+|++|++++|+|++++++|+|
T Consensus 3354 r~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G 3433 (3956)
T PRK12467 3354 DIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVG 3433 (3956)
T ss_pred eEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCC
Confidence 99999999999999999888877788999999999987554332211 12347899999999999999999999999
Q ss_pred CCcceeEEE-----ecccCCCchhhccccccccccccCcCCcceeccC
Q 007715 550 QPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMVHVD 592 (592)
Q Consensus 550 ~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~~gy~~~d 592 (592)
++ |||+| ++||+|+|+.| .+.+....|. .++-+.|+|||
T Consensus 3434 ~~--GEL~i~G~~v~~GY~~~~~~T-~~~F~~~p~~-~~g~r~yrTGD 3477 (3956)
T PRK12467 3434 VA--GELYIGGVGLARGYHQRPSLT-AERFVADPFS-GSGGRLYRTGD 3477 (3956)
T ss_pred CC--ceEEEcchhhhhhccCCcccc-hhhccCCCCC-CCCceeeccch
Confidence 95 99999 89999999987 3344333332 23456677777
|
|
| >COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-62 Score=514.74 Aligned_cols=396 Identities=26% Similarity=0.380 Sum_probs=338.4
Q ss_pred ccCCCCcchhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCC
Q 007715 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMT 243 (592)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~ 243 (592)
+|+.++.+|.+++|++++.. ...+|++|+++.++. ++. +++||+||.+.++++|+.|++. | +||||+|+||+.
T Consensus 1 ~wf~~~~lN~~~n~~dr~~~-~~~~~~~aii~~~e~--~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~ 75 (528)
T COG0365 1 KWFEGGTLNLALNALDRHLE-ADRPDDTAIIFDGED--GLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNS 75 (528)
T ss_pred CCcCCceeechhhhhhhhhh-ccCCCceEEEEEcCC--CCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCC
Confidence 58999999999999999762 234899999998751 222 7999999999999999999975 7 999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCC
Q 007715 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI 323 (592)
Q Consensus 244 ~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 323 (592)
+|++++||||+|+||+++|+.+.++++.++++++++++++||++++..+.++..+....+.+.... ++++...+
T Consensus 76 pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~-~iv~~r~~----- 149 (528)
T COG0365 76 PEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS-VVVVPRLG----- 149 (528)
T ss_pred HHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc-eEEecccc-----
Confidence 999999999999999999999999999999999999999999999999988888887777665544 44443321
Q ss_pred CCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHH-HHhhhhcCCCCCCEEEE
Q 007715 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCW 402 (592)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~ 402 (592)
..|+++...... ..+..+..++|+++|+|||||||+||||+|+|++++... ......+++.++|++++
T Consensus 150 ------~~~~~~~~~~~~-----~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~ 218 (528)
T COG0365 150 ------LWYDEAVEKASE-----KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWN 218 (528)
T ss_pred ------ccHHHHhhccCC-----CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEe
Confidence 567777765443 233445788999999999999999999999999875444 44445778889999999
Q ss_pred ecccchhchhHH-HHHHHHcCCEEEEeCCCCC--hhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEe
Q 007715 403 PTNLGWVMGPVI-LFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (592)
Q Consensus 403 ~~~~~~~~~~~~-~~~~L~~G~~lvl~~~~~~--~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~g 479 (592)
.++++|..+.+. ++++|++|++++++++.++ +..++++|++++||+++++|+.+++|.+......+++++||.+.+.
T Consensus 219 ~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~Sa 298 (528)
T COG0365 219 SSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSA 298 (528)
T ss_pred CCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeecc
Confidence 999999999965 8999999999999987665 8899999999999999999999999999876667899999999999
Q ss_pred cCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-
Q 007715 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL- 558 (592)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v- 558 (592)
||||+++.++|+.+.++ ++|.+.||+||++.+++...+ +.+.++.|+|+||.++.|+|++|+++|+|+ |+|++
T Consensus 299 GEPLnpe~~~w~~~~~g-~~i~d~~gqTEtg~~~~~~~~--~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~---G~Lvi~ 372 (528)
T COG0365 299 GEPLNPEAFEWFYSALG-VWILDIYGQTETGMGFIAGRP--PVKNGSSGLPLPGYAVRRVDDEGNPVPPGV---GELVVR 372 (528)
T ss_pred CCCCCHHHHHHHHHHhC-CCEeccccccccCccccCCCC--CcCCCCCCCCCCCceeEEECCCCCcCCCCc---eEEEEe
Confidence 99999999999999887 999999999999966555444 445566699999999999999999999998 99999
Q ss_pred ------ecccCCCchhhccccccccccccCcCC---ccee
Q 007715 559 ------FPLYLGASDRLLNADHEEVYFRGMPMY---KGMV 589 (592)
Q Consensus 559 ------~~gY~~~~~~~~~~~~~~~~f~~~~~~---~gy~ 589 (592)
+++|||+|+++.+.-+..+|+++|.++ +||+
T Consensus 373 ~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy~ 412 (528)
T COG0365 373 LPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDEDGYF 412 (528)
T ss_pred CCCchhhhhhhCCHHHHHHHHhhceeecCceeEEccCCCE
Confidence 469999999986655545888887666 3654
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-63 Score=647.36 Aligned_cols=510 Identities=17% Similarity=0.167 Sum_probs=406.6
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCC------
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP------ 83 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~------ 83 (592)
-+.+|+|+.++...+|.++|++++++..++ +||++||++ |++.+++.|.. ++.|+||+||++++......
T Consensus 339 ~n~lplr~~~~~~~tf~~~l~~v~~~~~~a~~hq~~p~~~-iv~~l~~~r~~--~~~plf~~~~~~~~~~~~~~~~~~~~ 415 (5163)
T PRK12316 339 VNTQVLRSVFDGRTRVATLLAGVKDTVLGAQAHQDLPFER-LVEALKVERSL--SHSPLFQVMYNHQPLVADIEALDTVA 415 (5163)
T ss_pred eeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHHHhCCCCCC--CCCCcEEEEEEeecccccccccccCC
Confidence 356899999999999999999999998877 999999999 99999998884 45566999999987432110
Q ss_pred ---CCcCCCccccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc--ccC
Q 007715 84 ---LYWFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDR 157 (592)
Q Consensus 84 ---~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~~ 157 (592)
....+......++||.+.+.+.++++.+.+ |+. ++|+.++++++.++|.++|+++..+++.+...+ +..
T Consensus 416 ~~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~i~~~p~~~i~~l~~~~~ 490 (5163)
T PRK12316 416 GLEFGQLEWKSRTTQFDLTLDTYEKGGRLHAALTYAT-----DLFEARTVERMARHWQNLLRGMVENPQARVDELPMLDA 490 (5163)
T ss_pred CceEEeeccCCCccceeEEEEEEEcCCcEEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhccccccccCCCCCH
Confidence 011122235578899999888888899999 988 999999999999999999999987776666553 222
Q ss_pred CCCCCCCCccCCCCcc----hhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCC
Q 007715 158 TDKSKHGGTWLPGSVL----NIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSK 232 (592)
Q Consensus 158 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~ 232 (592)
.+.......|+..... ......+.+ +++++||++|+++.++ ++||+||+++++++|+.|++. +++
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~a~~~p~~~A~~~~~~--------~~TY~eL~~~~~~lA~~L~~~gv~~ 560 (5163)
T PRK12316 491 EERGQLVEGWNATAAEYPLQRGVHRLFEE--QVERTPEAPALAFGEE--------TLDYAELNRRANRLAHALIERGVGP 560 (5163)
T ss_pred HHHHHHHHHhcCccccCCCCCCHHHHHHH--HHHHCCCCeEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCC
Confidence 2221122234332211 112222333 4589999999999877 999999999999999999999 999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEE
Q 007715 233 GDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAI 312 (592)
Q Consensus 233 gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (592)
|++|+|+++|++++++++|||+|+|+++||+||.+|.+++.+++++++++++|++..... .+.......++
T Consensus 561 g~~V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~---------~~~~~~~~~~~ 631 (5163)
T PRK12316 561 DVLVGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGR---------KLPLAAGVQVL 631 (5163)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhh---------hCCcccCceEE
Confidence 999999999999999999999999999999999999999999999999999999875321 00000011112
Q ss_pred EEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhc
Q 007715 313 VLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI 392 (592)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~ 392 (592)
.+... ........ ...+.....++++|||+|||||||+||||+++|+++++.+.+....+
T Consensus 632 ~~~~~---------------~~~~~~~~-----~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~ 691 (5163)
T PRK12316 632 DLDRP---------------AAWLEGYS-----EENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY 691 (5163)
T ss_pred EecCc---------------chhhccCC-----CCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc
Confidence 22100 00001000 11122344678999999999999999999999999999999998999
Q ss_pred CCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCC--CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCC
Q 007715 393 DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDW 470 (592)
Q Consensus 393 ~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~--~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l 470 (592)
+++++|++++.+|++|+.+++++|.+|++|+++++.+. ..++..+++.|++++||++.++|++++.|.+... ..++
T Consensus 692 ~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~ 769 (5163)
T PRK12316 692 GLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASC 769 (5163)
T ss_pred CCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccC
Confidence 99999999999999999999999999999999999863 3588899999999999999999999999986542 2357
Q ss_pred ccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCc-CCCCccCcccccCCCceEEEECCCCCCCCCC
Q 007715 471 TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDD 549 (592)
Q Consensus 471 ~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G 549 (592)
++||.+++|||++++++.+++...+++++++|.||+||+++.++.... .......++|+|++|++++|+|++++++|.|
T Consensus 770 ~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G 849 (5163)
T PRK12316 770 TSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVG 849 (5163)
T ss_pred CCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCC
Confidence 899999999999999999999888777899999999999864433222 2233457899999999999999999999999
Q ss_pred CCcceeEEE-----ecccCCCchhhcc
Q 007715 550 QPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 550 ~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
++ |||+| ++||+|+|+.|..
T Consensus 850 ~~--GEl~i~G~~v~~GYl~~~~~t~~ 874 (5163)
T PRK12316 850 VL--GELYLAGRGLARGYHGRPGLTAE 874 (5163)
T ss_pred Cc--eEEEecccccChhhCCChhhhhh
Confidence 95 99999 8999999998743
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-63 Score=647.01 Aligned_cols=522 Identities=17% Similarity=0.169 Sum_probs=413.0
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCC----CC
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP----LY 85 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~----~~ 85 (592)
.+++|+|++++...+|.++|++++++..++ +||++||++ |++.+++.|.. ++.|+||+||++++...... ..
T Consensus 2888 vntlPlrv~l~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~--~~~plf~~~~~~~~~~~~~~~~~~~~ 2964 (5163)
T PRK12316 2888 VNTQVLRAQVDAQLAFRDLLGQVKEQALGAQAHQDLPFEQ-LVEALQPERSL--SHSPLFQVMYNHQSGERAAAQLPGLH 2964 (5163)
T ss_pred ecceeEEEecCCCCCHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHhcccccc--CCCCceeEEEeeeccccccccCCCce
Confidence 467899999999999999999999998877 999999999 99999988874 45566999999988654321 00
Q ss_pred --cCCCccccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc--ccCCCC
Q 007715 86 --WFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDK 160 (592)
Q Consensus 86 --~~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~ 160 (592)
.........++||.+.+.+.++++...+ |+. ++|++++++++.++|.++|+++...++.+...+ +...+.
T Consensus 2965 ~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~f~~lL~~l~~~p~~~i~~l~~~~~~~~ 3039 (5163)
T PRK12316 2965 IESFAWDGAATQFDLALDTWESAEGLGASLTYAT-----DLFDARTVERLARHWQNLLRGMVENPQRSVDELAMLDAEER 3039 (5163)
T ss_pred eEeeeccCCccceeeEEEEEecCCcEEEEEEECc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCchhhccCCCHHHH
Confidence 1111234578899998888788888888 998 999999999999999999999987666555443 222222
Q ss_pred CCCCCccCCCCcchhhhhhccc--cccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEE
Q 007715 161 SKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237 (592)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~ 237 (592)
......|+..........+++. ..+++++||++|+++.++ .+||+||+++++++|+.|++. +++|++|+
T Consensus 3040 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~gv~~~~~V~ 3111 (5163)
T PRK12316 3040 GQLLEAWNATAAEYPLERGVHRLFEEQVERTPDAVALAFGEQ--------RLSYAELNRRANRLAHRLIERGVGPDVLVG 3111 (5163)
T ss_pred HHHHHHhCCCCcCCCCcCCHHHHHHHHHHhCCCCeeEeeCCe--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 2222345543322222222322 225689999999999887 999999999999999999999 99999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCC
Q 007715 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI 317 (592)
Q Consensus 238 i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 317 (592)
|+++|++++++++|||+|+|++||||||.+|.+|+.+++++++++++++++.. .+.......++.+...
T Consensus 3112 l~~~~s~~~iv~~lail~aGa~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~-----------~~~~~~~~~~~~~~~~ 3180 (5163)
T PRK12316 3112 VAVERSLEMVVGLLAILKAGGAYVPLDPEYPEERLAYMLEDSGAQLLLSQSHL-----------RLPLAQGVQVLDLDRG 3180 (5163)
T ss_pred EEccCCHHHHHHHHHHHHhCceeeecCCCCcHHHHHHHHHhcCCCEEEeCccc-----------cCCccCCccEEEeccc
Confidence 99999999999999999999999999999999999999999999999998642 0000001112222110
Q ss_pred CCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCC
Q 007715 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (592)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (592)
. ... ....+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++
T Consensus 3181 ~------------------~~~-----~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~ 3237 (5163)
T PRK12316 3181 D------------------ENY-----AEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAYGLGVG 3237 (5163)
T ss_pred c------------------ccc-----cccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHHHHHHHHHHHHhhCCCcc
Confidence 0 000 00112234567899999999999999999999999999999998889999999
Q ss_pred CEEEEecccchhchhHHHHHHHHcCCEEEEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccE
Q 007715 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRS 475 (592)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~ 475 (592)
|+++++++++||.+++++|.+|++|+++++.+.. .++..+.+.++++++|++.++|+++..+.+... ...+++||.
T Consensus 3238 d~~l~~~~~~fd~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~~~~--~~~~~~lr~ 3315 (5163)
T PRK12316 3238 DRVLQFTTFSFDVFVEELFWPLMSGARVVLAGPEDWRDPALLVELINSEGVDVLHAYPSMLQAFLEEED--AHRCTSLKR 3315 (5163)
T ss_pred cEEEeecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCcEEEcCHHHHHHHHhccc--cccCCcceE
Confidence 9999999999999999999999999999998632 377889999999999999999999999886532 234679999
Q ss_pred EEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcce
Q 007715 476 FASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVG 554 (592)
Q Consensus 476 v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giG 554 (592)
+++|||++++++.++|.. +.+++|.|||||+++.++..... ......+||+|++|++++|+|++++++|+|++ |
T Consensus 3316 ~~~gGe~l~~~~~~~~~~---~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~--G 3390 (5163)
T PRK12316 3316 IVCGGEALPADLQQQVFA---GLPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYILDGSLEPVPVGAL--G 3390 (5163)
T ss_pred EEEccccCCHHHHHHHHh---CCcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEEECCCCCCCCCCCC--c
Confidence 999999999999988873 46799999999999765543332 23345799999999999999999999999995 9
Q ss_pred eEEE-----ecccCCCchhhccccccccccccCcCCcceeccC
Q 007715 555 EVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMVHVD 592 (592)
Q Consensus 555 el~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~~gy~~~d 592 (592)
||+| ++||+|+|+.|. +.+....| .++-+.|+|||
T Consensus 3391 El~i~G~~v~~GY~~~~~~t~-~~f~~~p~--~~~~~~y~TGD 3430 (5163)
T PRK12316 3391 ELYLGGEGLARGYHNRPGLTA-ERFVPDPF--VPGERLYRTGD 3430 (5163)
T ss_pred eEEecccccchhcCCChhhch-hhCCCCCC--CCCCeeEecCc
Confidence 9999 899999999873 33433333 24556777777
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-63 Score=640.82 Aligned_cols=528 Identities=15% Similarity=0.116 Sum_probs=408.9
Q ss_pred hHHHhhCCChhHH---HHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCCC--
Q 007715 11 EDLMKVGLKLEEA---EEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPL-- 84 (592)
Q Consensus 11 ~~~~~~~~~~~~~---~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~~-- 84 (592)
-+..|+|++++.. .++.++|+++++...++ +||++||++ |++..+..+. . ||||++|+++|.+.....
T Consensus 3550 iNtlp~Rv~~~~~~~~~t~~~~L~~v~~~~~~~~~~q~~~l~~-i~~~~~~~~~---~--~LF~t~~v~~n~~~~~~~~~ 3623 (4334)
T PRK05691 3550 INSIALRVQLPAAGQRCSVRQWLQGLLDSNMELREYEYLPLVA-IQECSELPKG---Q--PLFDSLFVFENAPVEVSVLD 3623 (4334)
T ss_pred ccccceEEeeCCccCCCcHHHHHHHHHHHHHHHhhccCCCHHH-HHHHhcCCCC---C--CCccEEEEeecCCcchhhhc
Confidence 3688999999765 59999999999998777 999999999 9988754322 2 669999999998643210
Q ss_pred ----CcCCC--ccccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc--c
Q 007715 85 ----YWFPS--LDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--L 155 (592)
Q Consensus 85 ----~~~~~--~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~ 155 (592)
..... .....+++|++.+.. ++.+...+ |+. ++|+..+++++.++|.++|+++...+..+...+ +
T Consensus 3624 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~l~~~l~y~~-----~~~~~~~~~~l~~~f~~~L~~l~~~~~~~~~~~~~~ 3697 (4334)
T PRK05691 3624 RAQSLNASSDSGRTHTNFPLTAVCYP-GDDLGLHLSYDQ-----RYFDAPTVERLLGEFKRLLLALVQGFHGDLSELPLL 3697 (4334)
T ss_pred ccccccccccccccccCCCeEEEEec-CCceEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhCcCCChhhcCCC
Confidence 00011 123456777765543 45677777 987 999999999999999999999987666655543 2
Q ss_pred cCCCCCCCCCccCCCCcchhhhhhccc--cccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCC
Q 007715 156 DRTDKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSK 232 (592)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~ 232 (592)
...+.......|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|+.|++. |++
T Consensus 3698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~~tY~eL~~~~~~la~~L~~~gv~~ 3769 (4334)
T PRK05691 3698 GEQERDFLLDGCNRSERDYPLEQSYVRLFEAQVAAHPQRIAASCLDQ--------QWSYAELNRAANRLGHALRAAGVGV 3769 (4334)
T ss_pred CHHHHHHHHHhhCCccCCCccccCHHHHHHHHHHhCCCceEEEcCCC--------cccHHHHHHHHHHHHHHHHHcCCCC
Confidence 222222223345544333323334333 236689999999999887 999999999999999999999 999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC---C
Q 007715 233 GDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---L 309 (592)
Q Consensus 233 gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~---~ 309 (592)
|++|+|++++|+++++++|||+|+|++||||||.+|.+|+.+++++++++++|+++.... ....+..... .
T Consensus 3770 ~~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~ 3843 (4334)
T PRK05691 3770 DQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACRE------QARALLDELGCANR 3843 (4334)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccc------hhhhhhcccccccc
Confidence 999999999999999999999999999999999999999999999999999999986421 1111111110 0
Q ss_pred cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhh
Q 007715 310 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 389 (592)
Q Consensus 310 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~ 389 (592)
..+++ +++...... ....+.....++++|||+|||||||+||||+++|+++++.+.+..
T Consensus 3844 ~~~~~-----------------~~~~~~~~~----~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~ 3902 (4334)
T PRK05691 3844 PRLLV-----------------WEEVQAGEV----ASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKV 3902 (4334)
T ss_pred cceee-----------------ecccccccc----cccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHH
Confidence 01111 011100000 011122345679999999999999999999999999999999988
Q ss_pred hhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCC
Q 007715 390 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 467 (592)
Q Consensus 390 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~ 467 (592)
..++++++|++++.++++||.+++++|.+|+.|+++++++.. .++..+++.|++++||++.++|++++.|++.. .
T Consensus 3903 ~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~ 3979 (4334)
T PRK05691 3903 PYLALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---R 3979 (4334)
T ss_pred HhcCCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---c
Confidence 899999999999999999999999999999999999998743 47889999999999999999999999987643 2
Q ss_pred CCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcC---CCCccCcccccCCCceEEEECCCCC
Q 007715 468 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDECGV 544 (592)
Q Consensus 468 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~v~IlD~~g~ 544 (592)
..+++||.+++|||++++++.+.|.+..++++++|.||+|||++.++..... ......+||+|++|++++|+|++++
T Consensus 3980 ~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~ 4059 (4334)
T PRK05691 3980 QALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALE 4059 (4334)
T ss_pred ccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCC
Confidence 3478999999999999999999988888888999999999999765433222 1223468999999999999999999
Q ss_pred CCCCCCCcceeEEE-----ecccCCCchhhccccccccccccCcCCcceeccC
Q 007715 545 PYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMVHVD 592 (592)
Q Consensus 545 ~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~~gy~~~d 592 (592)
++|.|+ +||||| ++||+|+|+.|.. .+....|. .++.+.|+|||
T Consensus 4060 ~~p~g~--~GEL~i~G~~v~~GY~~~~~~t~~-~f~~~p~~-~~~~~~yrTGD 4108 (4334)
T PRK05691 4060 LVPLGA--VGELCVAGTGVGRGYVGDPLRTAL-AFVPHPFG-APGERLYRTGD 4108 (4334)
T ss_pred CCCCCC--ceEEEEecccccccccCCcccchh-hcccCCCC-CCCceeeccCc
Confidence 999999 499999 8999999998743 33333332 24567788887
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-62 Score=590.93 Aligned_cols=522 Identities=17% Similarity=0.124 Sum_probs=395.1
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCCCCcCC-
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFP- 88 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~~~~~~- 88 (592)
.+.+|+|+.++...+|.++|++++++..++ +||++||++ |++.++..+ +..|+||++|++++...........
T Consensus 294 vntlplr~~~~~~~tf~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~~~~----~~~~lf~~~~~~~~~~~~~~~~~~~~ 368 (1296)
T PRK10252 294 LNVLPLRVHIAAQETLPELATRLAAQLKKMRRHQRYDAEQ-IVRDSGRAA----GDEPLFGPVLNIKVFDYQLDFPGVQA 368 (1296)
T ss_pred cceEEEEEecCCCCCHHHHHHHHHHHHHHHHhhcCCCHHH-HHHHhcCcc----CCCCceeEEEEeeecccccCcCCccc
Confidence 468999999999999999999999998888 999999999 999986322 3446699999998754321110000
Q ss_pred ---CccccccccHHHHHH-HhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc--ccCCCCC
Q 007715 89 ---SLDQSKLTNLGNALE-IHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKS 161 (592)
Q Consensus 89 ---~~~~~~~~dl~~~~~-~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~ 161 (592)
.......+|+.+.+. ..++++...+ |+. ++|+..+++++.++|..+|+++..+++.+...+ +...+..
T Consensus 369 ~~~~~~~~~~~dl~l~~~~~~~~~l~~~~~y~~-----~~f~~~~i~~l~~~~~~ll~~~~~~p~~~i~~~~~~~~~~~~ 443 (1296)
T PRK10252 369 QTHTLATGPVNDLELALFPDEHGGLSIEILANP-----QRYDEATLIAHAERLKALIAQFAADPALLCGDVDILLPGEYA 443 (1296)
T ss_pred eeeecCCCccCCeEEEEEECCCCcEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHHhCCCCChhhcCCCCHHHHH
Confidence 001112347766665 3356777788 987 999999999999999999999986666554432 2211111
Q ss_pred CCCCccCCCCcchh---hhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEE
Q 007715 162 KHGGTWLPGSVLNI---AECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237 (592)
Q Consensus 162 ~~~~~~~~~~~~~~---~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~ 237 (592)
. ...|+....... ....+.. +++.+||++|+++.++ .+||+||+++++++|+.|.+. +++||+|+
T Consensus 444 ~-~~~~~~~~~~~~~~~l~~~~~~--~~~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~ 512 (1296)
T PRK10252 444 Q-LAQVNATAVEIPETTLSALVAQ--QAAKTPDAPALADARY--------QFSYREMREQVVALANLLRERGVKPGDSVA 512 (1296)
T ss_pred H-HHHhcCCCCCCCcCCHHHHHHH--HHHhCCCCeEEEcCCC--------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 1 122322211111 1122222 4578999999999876 899999999999999999999 99999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCC
Q 007715 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI 317 (592)
Q Consensus 238 i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 317 (592)
|+++|++++++++|||+++|++|||+||.+|.+++.+++++++++++++++..... +.+ ... ..++
T Consensus 513 l~~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~---------~~~-~~~-~~~~--- 578 (1296)
T PRK10252 513 VALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPR---------FAD-VPD-LTSL--- 578 (1296)
T ss_pred EEeCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhh---------ccc-CCC-ceee---
Confidence 99999999999999999999999999999999999999999999999998753211 000 000 0000
Q ss_pred CCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCC
Q 007715 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (592)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (592)
.+......... .......++++|||+|||||||+||||+++|+++++.+.+....++++++
T Consensus 579 -------------~~~~~~~~~~~------~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~ 639 (1296)
T PRK10252 579 -------------CYNAPLAPQGA------APLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTAD 639 (1296)
T ss_pred -------------ecccccccccC------CCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCC
Confidence 00100000000 01112356899999999999999999999999999999999899999999
Q ss_pred CEEEEecccchhchhHHHHHHHHcCCEEEEeCC--CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCC--CCCCccc
Q 007715 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKI 473 (592)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~--~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~sL 473 (592)
|++++.+|++|+.+++++|.+|++|+++++.+. ..++..+++.|++++||++.++|+++..+++..... ...+++|
T Consensus 640 d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~l 719 (1296)
T PRK10252 640 DVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASL 719 (1296)
T ss_pred CEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCc
Confidence 999999999999999999999999999999863 347889999999999999999999999988653221 2346899
Q ss_pred cEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCC------CCccCcccccCCCceEEEECCCCCCCC
Q 007715 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ------PQAFGAFSTATMTAGLVILDECGVPYP 547 (592)
Q Consensus 474 r~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~------~~~~~~iG~p~~~~~v~IlD~~g~~vp 547 (592)
|.+++|||++++++.+++...+ +++++|.||+||+++.++...... .....++|+|++|++++|+|++++++|
T Consensus 720 r~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~ 798 (1296)
T PRK10252 720 RQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVP 798 (1296)
T ss_pred cEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCC
Confidence 9999999999999999888765 478999999999986544332211 233578999999999999999999999
Q ss_pred CCCCcceeEEE-----ecccCCCchhhccccccccccccCcCCcceeccC
Q 007715 548 DDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMVHVD 592 (592)
Q Consensus 548 ~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~~gy~~~d 592 (592)
+|++ |||+| ++||+|+|+.+.. .+....|. ++-+-|+|||
T Consensus 799 ~g~~--Gel~i~g~~~~~GY~~~~~~t~~-~f~~~~~~--~~~~~y~TGD 843 (1296)
T PRK10252 799 PGVA--GDLYLTGIQLAQGYLGRPDLTAS-RFIADPFA--PGERMYRTGD 843 (1296)
T ss_pred CCCc--eEEEecccccchhhCCCcccchh-hcccCCCC--CCCEEEecCc
Confidence 9995 99999 7899999997633 33222222 2334455555
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-62 Score=587.50 Aligned_cols=528 Identities=15% Similarity=0.106 Sum_probs=393.1
Q ss_pred HHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCCCCcCCCc
Q 007715 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSL 90 (592)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~~~~~~~~ 90 (592)
+..|+|+.++...+|.++|++++++..++ +||++||++ |++.+++.|..+.++ |+||++|..+...... ..
T Consensus 80 ~~lplr~~~~~~~t~~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~~~~~~~~~p-~lf~~~~~~~~~~~~~------~~ 151 (1389)
T TIGR03443 80 RPFVLRLNITPELSFLQLYAKVSEEEKEGASDIGVPFDE-LSEHIQAAKKLERTP-PLFRLAFQDAPDNQQT------TY 151 (1389)
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccCCCCCC-ccEEEEeecCCccccc------cc
Confidence 56899999999999999999999998888 999999999 999999888755444 4799777643321111 11
Q ss_pred cccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc--ccCCCCCCC----
Q 007715 91 DQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKH---- 163 (592)
Q Consensus 91 ~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~---- 163 (592)
....++||.+.+.+.++++...+ |+. ++|+..+++.+.++|..+|+++...++.+...+ +...+....
T Consensus 152 ~~~~~~dl~~~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~f~~lL~~~~~~p~~~l~~l~~~~~~~~~~~~~~~ 226 (1389)
T TIGR03443 152 STGSTTDLTVFLTPSSPELELSIYYNS-----LLFSSDRITIVADQLAQLLSAASSNPDEPIGKVSLITPSQKSLLPDPT 226 (1389)
T ss_pred ccCCccceEEEEEecCCcEEEEEEEch-----hcCCHHHHHHHHHHHHHHHHHHHhCcCCceecccCCCHHHHhhhhccc
Confidence 34578899998888888888889 988 999999999999999999999987776665543 222111100
Q ss_pred -CCccCCCCcchhhhhhccccccCCCCCCceEEEEeccCC-CCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEc
Q 007715 164 -GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDM 240 (592)
Q Consensus 164 -~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~-~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~ 240 (592)
...|... .......+++ +++.+||++|+++..... .....+++||+||+++++++|++|++. +++||+|+|++
T Consensus 227 ~~~~~~~~--~~~l~~~~~~--~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~ 302 (1389)
T TIGR03443 227 KDLDWSGF--RGAIHDIFAD--NAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYA 302 (1389)
T ss_pred cccCcCcc--cCcHHHHHHH--HHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEe
Confidence 0122210 0111223333 448899999998642100 011234899999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhc-C---C-CcEEEEc
Q 007715 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-A---P-LKAIVLP 315 (592)
Q Consensus 241 ~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~i~ 315 (592)
+|++++++++|||+|+|+++||+||.+|.+++.++++++++++++++.... ............ . . ...+.+.
T Consensus 303 ~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1389)
T TIGR03443 303 YRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAG---TLDQLVRDYIDKELELRTEIPALALQ 379 (1389)
T ss_pred cCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEecccc---ccchhhhhhhhcccccccccceEEec
Confidence 999999999999999999999999999999999999999999999876421 000111111100 0 0 0011111
Q ss_pred CCCCCCCCCCccCcc--cHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC
Q 007715 316 AIGNDVGIPLREQDL--SWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID 393 (592)
Q Consensus 316 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~ 393 (592)
..... ..+.. ...+....... ...........++++|||+|||||||+||||+++|+++++.+.+....++
T Consensus 380 ~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~ 452 (1389)
T TIGR03443 380 DDGSL-----VGGSLEGGETDVLAPYQA--LKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFG 452 (1389)
T ss_pred ccccc-----cccccccccccccccccc--cccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcC
Confidence 10000 00000 00011100000 00001112345789999999999999999999999999999888888899
Q ss_pred CCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCc
Q 007715 394 LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT 471 (592)
Q Consensus 394 ~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~ 471 (592)
+.++|++++.++++|+.+++++|.+|+.|+++++.+.. .++..+.+.|++++||++.++|++++.|.... ...++
T Consensus 453 ~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~ 529 (1389)
T TIGR03443 453 LSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIP 529 (1389)
T ss_pred CCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCC
Confidence 99999999999999999999999999999999998643 26778999999999999999999999987543 23478
Q ss_pred cccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCC----------CCccCcccccCCCceEEEECC
Q 007715 472 KIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDE 541 (592)
Q Consensus 472 sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~~~~v~IlD~ 541 (592)
+||.+++|||++++....++....++++++|.||+||+++.++...... .....++|+|++|++++|+|+
T Consensus 530 ~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~ 609 (1389)
T TIGR03443 530 SLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNR 609 (1389)
T ss_pred CccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECC
Confidence 9999999999999999888887777789999999999986544322110 113468999999999999996
Q ss_pred C--CCCCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 542 C--GVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 542 ~--g~~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
+ ++++|+|++ |||+| ++||+|+|+.+..
T Consensus 610 ~~~~~~~~~G~~--GEL~i~G~~v~~GY~~~p~~t~~ 644 (1389)
T TIGR03443 610 NDRTQTCGVGEV--GEIYVRAGGLAEGYLGLPELNAE 644 (1389)
T ss_pred ccCCCcCCCCCc--eEEEecccccchhcCCChhHhhh
Confidence 4 588999995 99999 7999999998743
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-61 Score=627.44 Aligned_cols=531 Identities=13% Similarity=0.089 Sum_probs=407.5
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCC-----C
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP-----L 84 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~-----~ 84 (592)
.+.+|+|++++...+|.++|++++++..++ +||++||++ |++.|++.|..+.+ ||||+||++++...... .
T Consensus 2018 vntlPlrv~~~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~~~~--plf~~~~~~~~~~~~~~~~~~~~ 2094 (4334)
T PRK05691 2018 LNTQVLRCQLDGQMSVSELLEQVRQTVIEGQSHQDLPFDH-LVEALQPPRSAAYN--PLFQVMCNVQRWEFQQSRQLAGM 2094 (4334)
T ss_pred eeeeeEEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccccCCC--CceEEEEEeeccccccccCCCCc
Confidence 367899999999999999999999998877 999999999 99999998885555 55999999987542211 0
Q ss_pred --CcCCCccccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc--ccCCC
Q 007715 85 --YWFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTD 159 (592)
Q Consensus 85 --~~~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~ 159 (592)
..........+|||.+.+.+.++++.+.+ |+. ++|+.++++++.++|.++|+++...++.+...+ +...+
T Consensus 2095 ~~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 2169 (4334)
T PRK05691 2095 TVEYLVNDARATKFDLNLEVTDLDGRLGCCLTYSR-----DLFDEPRIARMAEHWQNLLEALLGDPQQRLAELPLLAAAE 2169 (4334)
T ss_pred eeEeecccCCccccceEEEEEecCCcEEEEEEECc-----ccCCHHHHHHHHHHHHHHHHHHHhhhcCChhhccCCcHHH
Confidence 11112234678899888877778888888 988 999999999999999999999876665554432 22221
Q ss_pred CCCCCCccCCCCcchhhhhhccc--cccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEE
Q 007715 160 KSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAI 236 (592)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V 236 (592)
.......|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|++|++. +++|++|
T Consensus 2170 ~~~l~~~~~~~~~~~~~~~~l~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~Gv~~g~~V 2241 (4334)
T PRK05691 2170 QQQLLDSLAGEAGEARLDQTLHGLFAAQAARTPQAPALTFAGQ--------TLSYAELDARANRLARALRERGVGPQVRV 2241 (4334)
T ss_pred HHHHHHHhCCCCcCCCcccchHHHHHHHHHHCCCCeEEEeCCe--------EEcHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 11111122222211111222222 225689999999999877 999999999999999999999 9999999
Q ss_pred EEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCc--EEEE
Q 007715 237 AIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVL 314 (592)
Q Consensus 237 ~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i 314 (592)
+++++|++++++++|||+|+|++||||||.+|.+|+.+++++++++++|++..... .+ ...... .+.+
T Consensus 2242 ~l~~~~s~~~vv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~---------~~-~~~~~~~~~~~~ 2311 (4334)
T PRK05691 2242 GLALERSLEMVVGLLAILKAGGAYVPLDPEYPLERLHYMIEDSGIGLLLSDRALFE---------AL-GELPAGVARWCL 2311 (4334)
T ss_pred EEEeCCCHHHHHHHHHHHHhCcEeecCCCCChHHHHHHHHHhcCCCEEEeChhhhh---------hh-ccccccceeEEe
Confidence 99999999999999999999999999999999999999999999999999875321 11 001111 1111
Q ss_pred cCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCC
Q 007715 315 PAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL 394 (592)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~ 394 (592)
... ...+ ..... ........++++|||+|||||||+||||+++|+++.+.+.+....+++
T Consensus 2312 ~~~--------------~~~~-~~~~~-----~~~~~~~~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~~ 2371 (4334)
T PRK05691 2312 EDD--------------AAAL-AAYSD-----APLPFLSLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFGM 2371 (4334)
T ss_pred ccc--------------hhhh-hcCCC-----CCCCCCCCCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCC
Confidence 100 0000 00000 011122346899999999999999999999999999988888888999
Q ss_pred CCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCC-CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccc
Q 007715 395 KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473 (592)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sL 473 (592)
+++|++++.++++|+.+.+++|.+|+.|+++++.+. ..++..+.+.|++++||++.++|++++.|.+.... .....+|
T Consensus 2372 ~~~d~~l~~~~~~fd~~~~~i~~~L~~G~~lvl~~~~~~~~~~l~~~i~~~~vt~~~~tPs~~~~l~~~~~~-~~~~~~l 2450 (4334)
T PRK05691 2372 RADDCELHFYSINFDAASERLLVPLLCGARVVLRAQGQWGAEEICQLIREQQVSILGFTPSYGSQLAQWLAG-QGEQLPV 2450 (4334)
T ss_pred CcccEEEEecCccHHHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHHhhhc-cccCCCc
Confidence 999999999999999999999999999999999763 34788999999999999999999999999865322 2345689
Q ss_pred cEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcC----CCCccCcccccCCCceEEEECCCCCCCCCC
Q 007715 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDD 549 (592)
Q Consensus 474 r~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G 549 (592)
|.+++|||++++++.+++...++..+++|.||+||++++.+..... ......++|+|++|+.++|+|+++++||+|
T Consensus 2451 r~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~pi~~~~~~i~d~~~~~vp~G 2530 (4334)
T PRK05691 2451 RMCITGGEALTGEHLQRIRQAFAPQLFFNAYGPTETVVMPLACLAPEQLEEGAASVPIGRVVGARVAYILDADLALVPQG 2530 (4334)
T ss_pred eEEEEccccCCHHHHHHHHHhCCCceEEeCcCCCcceEEEEEeecccccccCCCCCccccccCCCEEEEECCCCCCCCCC
Confidence 9999999999999999998887767899999999998643332211 112345799999999999999999999999
Q ss_pred CCcceeEEE-----ecccCCCchhhccccccccccccCcCCcceeccC
Q 007715 550 QPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMVHVD 592 (592)
Q Consensus 550 ~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~~gy~~~d 592 (592)
++ |||+| ++||+|+|+.|.. .+....|.. .+-+.|+|||
T Consensus 2531 ~~--GEL~i~G~~v~~GY~~~~~~t~~-~F~~~p~~~-~~~r~y~TGD 2574 (4334)
T PRK05691 2531 AT--GELYVGGAGLAQGYHDRPGLTAE-RFVADPFAA-DGGRLYRTGD 2574 (4334)
T ss_pred Cc--eEEEecccccCccccCChhhhhh-hccCCCCCC-CCCceEeccc
Confidence 95 99998 8999999997733 332222221 1224566665
|
|
| >PTZ00237 acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-59 Score=517.70 Aligned_cols=459 Identities=19% Similarity=0.233 Sum_probs=351.6
Q ss_pred CcCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCCCCCCCccCCCCcchhhhhhccccccCCCCCCceEEEE
Q 007715 118 ITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVW 197 (592)
Q Consensus 118 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~ 197 (592)
+++|+.+++++++++..||..+.+.+ +.|.+++.++++.. ....+||+++.+|.+++++++++....+||++|+++
T Consensus 7 ~~~y~~~~~~s~~~~~~fw~~~~~~~-~~~~~~~~~~~~~~---~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~~A~~~ 82 (647)
T PTZ00237 7 PFDYENDSNYANSNPESFWDEVAKKY-VHWDKMYDKVYSGD---EIYPDWFKGGELNTCYNVLDIHVKNPLKRDQDALIY 82 (647)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHhc-CeeeCCcccccCCC---CCchhhCCCCeeeHHHHHHHHhhcccCCCCceEEEE
Confidence 35678899999999999999999997 68999999998642 233799999999999999998752123799999998
Q ss_pred eccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHH
Q 007715 198 REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRL 276 (592)
Q Consensus 198 ~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l 276 (592)
... +.+..+++||+||.++++++|+.|+++ |++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++|
T Consensus 83 ~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l 160 (647)
T PTZ00237 83 ECP--YLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRI 160 (647)
T ss_pred EcC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHH
Confidence 643 112346899999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhcCeeEEEEecceeccCccccchhhHhhcC------CCcEEEEcCCCCC--C------CCCCccCcccHHHhhccCCCC
Q 007715 277 RVSKAKGIFTQDFILRGGRKFPLYSKVLGAA------PLKAIVLPAIGND--V------GIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 277 ~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+++++++||+++...+.++.++....+.+.. ..+++++...... . .....+....|++++......
T Consensus 161 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (647)
T PTZ00237 161 ETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKEN 240 (647)
T ss_pred HhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccc
Confidence 9999999999886655555444444332221 1233333221100 0 000011234566665432110
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCch-HHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHc
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLS-SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (592)
............++|++||+|||||||+||||+++|++ +.+........+....+|++++.++++|+.+...++.+|+.
T Consensus 241 ~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~ 320 (647)
T PTZ00237 241 NQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGFLYGSLSL 320 (647)
T ss_pred cCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHHHHHHHHhC
Confidence 00111122345679999999999999999999999998 44433333445567788999999999999877678899999
Q ss_pred CCEEEEeCCCC-C----hhhHHHHHHHhCCcEEEccHHHHHHHHhcCc-----CCCCCCccccEEEEecCCCChhhHHHH
Q 007715 422 GATLALYQGSP-L----ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-----LEGLDWTKIRSFASTGETSNVDDDLWL 491 (592)
Q Consensus 422 G~~lvl~~~~~-~----~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~-----~~~~~l~sLr~v~~gGe~l~~~~~~~~ 491 (592)
|++++++++.. . +..+++.|++++||++.++|++++.|++... ....++++||.+++|||++++++.+++
T Consensus 321 G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~ 400 (647)
T PTZ00237 321 GNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYI 400 (647)
T ss_pred CcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHH
Confidence 99999987532 2 5689999999999999999999999987532 234578999999999999999999999
Q ss_pred HHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE--------ecccC
Q 007715 492 SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL--------FPLYL 563 (592)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v--------~~gY~ 563 (592)
.+.++ ++++|.||+||++++++..........+++|+|++|++++|+|++|+++++|+. |||++ +.||+
T Consensus 401 ~~~~g-~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge~--GEl~v~~p~~p~~~~gy~ 477 (647)
T PTZ00237 401 ENKLK-IKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILSEDGKELNVNEI--GEVAFKLPMPPSFATTFY 477 (647)
T ss_pred HHhcC-CCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEECCCCCCCCCCCc--eEEEEeccCCchhhCcee
Confidence 88775 889999999999865443222222234789999999999999999999999984 99998 36999
Q ss_pred CCchhhccccc--cccccccCcCC
Q 007715 564 GASDRLLNADH--EEVYFRGMPMY 585 (592)
Q Consensus 564 ~~~~~~~~~~~--~~~~f~~~~~~ 585 (592)
++++++..... .+||.+||-++
T Consensus 478 ~~~~~~~~~f~~~~g~~~TGDlg~ 501 (647)
T PTZ00237 478 KNDEKFKQLFSKFPGYYNSGDLGF 501 (647)
T ss_pred CCHHHHHHHHhCCCCEEECCcEEE
Confidence 99998743221 34455555544
|
|
| >PLN02654 acetate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-58 Score=511.35 Aligned_cols=454 Identities=23% Similarity=0.315 Sum_probs=349.5
Q ss_pred CHHHHHHHHhhCHHHHHHHHHhhccceeecccc--ccccCCCC---CCCCCccCCCCcchhhhhhccccccCCCCCCceE
Q 007715 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPK--CILDRTDK---SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVA 194 (592)
Q Consensus 120 ~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~A 194 (592)
+|+.+++++++++..||..+.+.+ .|..++. ++++.... ..+..+||.++.+|.+++++++++ .+.+|+++|
T Consensus 31 ~y~~~~~~s~~~~~~fw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~wf~g~~~N~~~~~l~~~~-~~~~~~~~A 107 (666)
T PLN02654 31 QYMEMYKRSVDDPAGFWSDIASQF--YWKQKWEGDEVCSENLDVRKGPISIEWFKGGKTNICYNCLDRNV-EAGNGDKIA 107 (666)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhC--CeecCCCcceEeccCCCcccCCccccccCCCEeeHHHHHHHHhh-ccCCCCCEE
Confidence 578899999999999999999985 5766653 55532111 123568999999999999999865 135899999
Q ss_pred EEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHH
Q 007715 195 IVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIA 273 (592)
Q Consensus 195 l~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~ 273 (592)
+++.+. +.+..+++||+||.++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++.
T Consensus 108 l~~~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~ 185 (666)
T PLN02654 108 IYWEGN--EPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESLA 185 (666)
T ss_pred EEEEcC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHH
Confidence 998543 223446899999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeeEEEEecceeccCccccchhhHhhcCC---------CcEEEEcCCCC--CCCCCC-ccCcccHHHhhccCCC
Q 007715 274 TRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---------LKAIVLPAIGN--DVGIPL-REQDLSWKDFLSSVDY 341 (592)
Q Consensus 274 ~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~--~~~~~~-~~~~~~~~~~~~~~~~ 341 (592)
++++++++++||+++.+.+..+.++....+.+... ..++....... ...... ......|+++.....
T Consensus 186 ~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 264 (666)
T PLN02654 186 QRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYP- 264 (666)
T ss_pred HHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcCC-
Confidence 99999999999999987766666554433322111 01111111000 000000 011233555543211
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHH-HHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHH
Q 007715 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR-CTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (592)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (592)
...+.....++|++||+|||||||+||||+++|++++. ........++++++|++++.++++|..+. +.++.+|
T Consensus 265 ----~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L 340 (666)
T PLN02654 265 ----TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPM 340 (666)
T ss_pred ----CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHHH
Confidence 11122335679999999999999999999999999754 34445566889999999999999999986 5678999
Q ss_pred HcCCEEEEeCCC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHh
Q 007715 420 LNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (592)
Q Consensus 420 ~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 494 (592)
+.|++++++++. +++..++++|++++||++.++|++++.|.+... ....++++||.++++||++++++++++.+.
T Consensus 341 ~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~ 420 (666)
T PLN02654 341 LNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFNV 420 (666)
T ss_pred HcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHHH
Confidence 999999999753 478899999999999999999999999987653 234578999999999999999999999888
Q ss_pred ccC--CceeccccchhcccccccCCc-CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-------ecccCC
Q 007715 495 AWY--NAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-------FPLYLG 564 (592)
Q Consensus 495 ~~~--~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-------~~gY~~ 564 (592)
++. +++.+.||+||+++..+...+ ..+.+++++|+|++|++++|+|++|++++.|+ +|||+| ++||+|
T Consensus 421 ~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~--~Gel~v~~~~p~~~~gy~~ 498 (666)
T PLN02654 421 VGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGEC--SGYLCVKKSWPGAFRTLYG 498 (666)
T ss_pred hCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCC--ceEEEEcCCCchhhhhhcC
Confidence 763 689999999999865443322 12456789999999999999999999999887 499998 469999
Q ss_pred Cchhhcccc---ccccccccCcCC
Q 007715 565 ASDRLLNAD---HEEVYFRGMPMY 585 (592)
Q Consensus 565 ~~~~~~~~~---~~~~~f~~~~~~ 585 (592)
+++++.+.. +.+||.+||-++
T Consensus 499 ~~~~~~~~~~~~~~g~~~TGD~~~ 522 (666)
T PLN02654 499 DHERYETTYFKPFAGYYFSGDGCS 522 (666)
T ss_pred ChHHHHHhhhhcCCCEEEeCceEE
Confidence 998774432 234555555443
|
|
| >TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-57 Score=505.26 Aligned_cols=452 Identities=25% Similarity=0.407 Sum_probs=356.0
Q ss_pred cCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCCCCCCCccCCCCcchhhhhhccccccCCCCCCceEEEEe
Q 007715 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (592)
Q Consensus 119 ~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~ 198 (592)
.+|+.+++++++++..||..+.+. .+.|.+++.++++.. .....+|++++.+|++++++++++ +.+||++|+++.
T Consensus 5 ~~y~~~~~~s~~~~~~fw~~~~~~-~~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~~ 79 (625)
T TIGR02188 5 EQYKELYEESIEDPDKFWAKLARE-LLDWFKPFTKVLDWS--FPPFYKWFVGGELNVSYNCVDRHL--EARPDKVAIIWE 79 (625)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHh-cCceecCCceeecCC--CCCCCeeCCCCEEEHHHHHHHHhh--ccCCCCeEEEEE
Confidence 467889999999999999999987 357888888887643 234679999999999999998865 679999999986
Q ss_pred ccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHH
Q 007715 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (592)
Q Consensus 199 ~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~ 277 (592)
++ +.+..+.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++
T Consensus 80 ~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~ 157 (625)
T TIGR02188 80 GD--EPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRIN 157 (625)
T ss_pred cC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHH
Confidence 53 123457899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCeeEEEEecceeccCccccchhhHhh---cCC---CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCC
Q 007715 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP---LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351 (592)
Q Consensus 278 ~~~~~~iv~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (592)
+++++++|+++...+.++..+....+.+ ..+ ..++++........ ........|+++...... .....
T Consensus 158 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~ 231 (625)
T TIGR02188 158 DAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVP-WVEGRDVWWHDLMAKASA-----YCEPE 231 (625)
T ss_pred hcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcC-ccccccccHHHHHhhcCC-----CCCce
Confidence 9999999999887666665554443322 222 12333332211100 001122346665543221 12233
Q ss_pred CCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHH-HHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEEEEeC
Q 007715 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (592)
Q Consensus 352 ~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~ 429 (592)
...+++++||+|||||||+||||+++|++++... ......++++++|++++.++++|..+. +.++.+|+.|+++++++
T Consensus 232 ~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~ 311 (625)
T TIGR02188 232 PMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFE 311 (625)
T ss_pred ecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEEC
Confidence 4567899999999999999999999999976433 334456788999999999999999886 56889999999999987
Q ss_pred CC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC--CCCCCccccEEEEecCCCChhhHHHHHHhcc--CCceec
Q 007715 430 GS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAIIE 502 (592)
Q Consensus 430 ~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~--~~~l~n 502 (592)
+. +++..++++|++++||++.++|++++.|.+.... ...++++||.+++|||++++++++++.+.++ +++++|
T Consensus 312 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~ 391 (625)
T TIGR02188 312 GTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVD 391 (625)
T ss_pred CCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEe
Confidence 53 3688999999999999999999999999876432 3456899999999999999999999988775 378999
Q ss_pred cccchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCC-CCCCcceeEEE-------ecccCCCchhhcccc
Q 007715 503 SCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYP-DDQPCVGEVGL-------FPLYLGASDRLLNAD 573 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp-~G~~giGel~v-------~~gY~~~~~~~~~~~ 573 (592)
.||+||+++.++..... .+.+++++|+|++|++++|+|++|++++ +|+. |||+| ++||+++++++.+..
T Consensus 392 ~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~--GeL~v~~p~p~~~~gy~~~~~~~~~~~ 469 (625)
T TIGR02188 392 TWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEG--GYLVIKQPWPGMLRTIYGDHERFVDTY 469 (625)
T ss_pred cccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCCe--EEEEEccCCCcccccccCChHHHHHHH
Confidence 99999998654433221 2345688999999999999999999999 8984 99998 579999998764433
Q ss_pred c---cccccccCcCC
Q 007715 574 H---EEVYFRGMPMY 585 (592)
Q Consensus 574 ~---~~~~f~~~~~~ 585 (592)
+ .+||.++|-++
T Consensus 470 ~~~~~g~~~TGDl~~ 484 (625)
T TIGR02188 470 FSPFPGYYFTGDGAR 484 (625)
T ss_pred hccCCCEEECCceEE
Confidence 2 33444554433
|
This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501. |
| >TIGR02316 propion_prpE propionate--CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-57 Score=500.93 Aligned_cols=436 Identities=22% Similarity=0.372 Sum_probs=345.8
Q ss_pred CHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCCCCCCCccCCCCcchhhhhhccccccCCCCCCceEEEEec
Q 007715 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWRE 199 (592)
Q Consensus 120 ~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~ 199 (592)
+|+.+++++++++..||..+++. +.|.+++.++++.. ..+..+||.++.+|.+++++++++ +.+|+++|+++.+
T Consensus 2 ~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~~~ 75 (628)
T TIGR02316 2 RYEEFYQRSIEQPEAFWAEQARR--IDWQTPPQRILDYS--NPPFARWFAGGRTNLCHNALDRHL--DERGEQLALVTVS 75 (628)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHh--CCeecCCcccccCC--CCCcCccCCCCEeeHHHHHHHHHh--CcCCCCeEEEEEc
Confidence 47888999999999999999997 57999998887542 235678999999999999998765 6799999999854
Q ss_pred cCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHh
Q 007715 200 DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRV 278 (592)
Q Consensus 200 ~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~ 278 (592)
. +.+..+++||+||+++++++|++|++. |++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++
T Consensus 76 ~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~ 153 (628)
T TIGR02316 76 S--ETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDD 153 (628)
T ss_pred C--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHh
Confidence 2 123346899999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCeeEEEEecceeccCccccchhhHhh---c---CCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCC
Q 007715 279 SKAKGIFTQDFILRGGRKFPLYSKVLG---A---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (592)
Q Consensus 279 ~~~~~iv~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (592)
+++++||+++...+.++.++....+.+ . ....++++...... ..........|+++...... ...+...
T Consensus 154 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 228 (628)
T TIGR02316 154 ATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAP-MRLIPGRDVDYAALRTQHED----AQVPVEW 228 (628)
T ss_pred cCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC-cCcccCccccHHHHhhcccc----CCCCcee
Confidence 999999999876666665554443322 1 12334444322111 00011123456665443211 1112223
Q ss_pred CCCCCeEEEEeCCCCCCCCcEEEeCCchHH-HHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEEEEeCC
Q 007715 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (592)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~ 430 (592)
..+++++||+|||||||+||||+++|++++ +........++++++|++++.++++|+.+. +.++.+|+.|++++++++
T Consensus 229 ~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~ 308 (628)
T TIGR02316 229 LESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEG 308 (628)
T ss_pred cCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCC
Confidence 467899999999999999999999999975 344455566789999999999999999986 668899999999999875
Q ss_pred C---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecccc
Q 007715 431 S---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (592)
Q Consensus 431 ~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (592)
. +++..++++|++++||++.++|++++.|.+... ....++++||.+++|||++++++.+++...++ .+++|.||
T Consensus 309 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~-~~~~~~yG 387 (628)
T TIGR02316 309 LPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLG-KPVIDNYW 387 (628)
T ss_pred CCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHhC-CCEEeccc
Confidence 3 467889999999999999999999999987643 23457899999999999999999998887765 78999999
Q ss_pred chhcccccccCCcC---CCCccCcccccCCCceEEEECC-CCCCCCCCCCcceeEEE--------ecccCCCchhhcc
Q 007715 506 GTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGL--------FPLYLGASDRLLN 571 (592)
Q Consensus 506 ~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~v~IlD~-~g~~vp~G~~giGel~v--------~~gY~~~~~~~~~ 571 (592)
+||++..++..... .....+++|+|++|++++|+|+ +|+++|+|+. |||+| +.||+++++++..
T Consensus 388 ~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~--Gel~v~gp~~~g~~~~~~~~~~~~~~ 463 (628)
T TIGR02316 388 QTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEK--GVLTVVPPLPPGCLSTVWGDDARFLK 463 (628)
T ss_pred ccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCc--EEEEEecCCCccccccccCChHHHHH
Confidence 99998543332221 2334578999999999999997 7999999994 99999 2678888876644
|
This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate. |
| >PRK03584 acetoacetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-56 Score=502.59 Aligned_cols=461 Identities=27% Similarity=0.401 Sum_probs=358.3
Q ss_pred CcCCCccccccccHHHHHHHhCCccccccCCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCCCCCC
Q 007715 85 YWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHG 164 (592)
Q Consensus 85 ~~~~~~~~~~~~dl~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (592)
.|.|+.+....++|..+....+.. |...+.+|+.+++++++++..||..+++...+.|.+++..+++.. ..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~--~~~~ 77 (655)
T PRK03584 5 LWTPSAERIAASRMTAFIRWLAAR-----RGLSFDDYAALWRWSVEDLEAFWQSVWDFFGVIGSTPYTVVLAGR--RMPG 77 (655)
T ss_pred CCCCChhhcccchHHHHHHHHHHH-----hCCChHhHHHHHHHHHhCHHHHHHHHHHhcCceecCCCcEeecCC--CCCC
Confidence 676666656667776554433222 222234678899999999999999999887678888888876542 2345
Q ss_pred CccCCCCcchhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCC
Q 007715 165 GTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243 (592)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~ 243 (592)
.+||.++.+|++++++++ .+|+++|+++.+. .+..+++||+||.++++++|++|++. +++||+|+|+++|+
T Consensus 78 ~~wf~~~~~n~~~~~~~~-----~~~~~~Al~~~~~---~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~ 149 (655)
T PRK03584 78 ARWFPGARLNYAENLLRH-----RRDDRPAIIFRGE---DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNI 149 (655)
T ss_pred CeeCCCCEeeHHHHhhcc-----CCCCCeEEEEECC---CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC
Confidence 789999999999999863 4689999998754 23456899999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHh---hcCCC--cEEEEcCCC
Q 007715 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL---GAAPL--KAIVLPAIG 318 (592)
Q Consensus 244 ~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~i~~~~ 318 (592)
+++++++|||+++|++++|+++.++.+++.+++++++++++|+++.+...++..+....+. ..++. .++++....
T Consensus 150 ~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 229 (655)
T PRK03584 150 PETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLG 229 (655)
T ss_pred HHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCC
Confidence 9999999999999999999999999999999999999999999987765555554444332 22222 344443221
Q ss_pred CCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHH-HHHHHhhhhcCCCCC
Q 007715 319 NDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLKVG 397 (592)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~~ 397 (592)
.............|+++...... .........+++++||+|||||||+||||+++|++++ +.+......+++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~ 305 (655)
T PRK03584 230 PAAAAAALPGALLWEDFLAPAEA----AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPG 305 (655)
T ss_pred CcccccccCCcccHHHHhhcccc----CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCC
Confidence 10000111234557776552211 1122234567899999999999999999999999875 445555667889999
Q ss_pred CEEEEecccchhchhHHHHHHHHcCCEEEEeCCC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCcc
Q 007715 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTK 472 (592)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~s 472 (592)
|++++.++++|+.+.+ ++.+|+.|++++++++. +++..++++|++++||++.++|++++.|.+... ....++++
T Consensus 306 d~~~~~~~~~~~~~~~-~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~s 384 (655)
T PRK03584 306 DRFFWYTTCGWMMWNW-LVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSA 384 (655)
T ss_pred CEEEEcCCchHHhHHH-HHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhh
Confidence 9999999999986543 66899999999998753 478899999999999999999999999986532 23457899
Q ss_pred ccEEEEecCCCChhhHHHHHHhcc-CCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCC
Q 007715 473 IRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQP 551 (592)
Q Consensus 473 Lr~v~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~ 551 (592)
||.+++|||++++++.+++.+.++ +.++++.||+||++..+.......+...+++|+|++|++++|+|++|+++ +|+
T Consensus 385 Lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd~~g~~~-~g~- 462 (655)
T PRK03584 385 LRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWDEDGRPV-VGE- 462 (655)
T ss_pred eEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEECCCCCCC-CCC-
Confidence 999999999999999999988874 57899999999986544433333345568899999999999999999999 787
Q ss_pred cceeEEE-------ecccCCCchh
Q 007715 552 CVGEVGL-------FPLYLGASDR 568 (592)
Q Consensus 552 giGel~v-------~~gY~~~~~~ 568 (592)
+|||+| +.||+|+++.
T Consensus 463 -~GeL~v~gp~p~~~~gy~~~~~~ 485 (655)
T PRK03584 463 -VGELVCTKPFPSMPLGFWNDPDG 485 (655)
T ss_pred -ceEEEEccCCCCCcceeeCCCcc
Confidence 499998 3599999874
|
|
| >PRK00174 acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-56 Score=497.94 Aligned_cols=437 Identities=27% Similarity=0.413 Sum_probs=344.3
Q ss_pred cCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCCCCCCCccCCCCcchhhhhhccccccCCCCCCceEEEEe
Q 007715 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (592)
Q Consensus 119 ~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~ 198 (592)
.+|..+.+++++++..+|..+.+. +.|..++.++++. ......|+.++.+|.+++++++++ +++||++|+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~---~~~~~~w~~~~~~n~~~~~l~~~~--~~~p~~~Al~~~ 89 (637)
T PRK00174 17 EQYKALYQESVEDPEGFWAEQAKR--LDWFKPFDTVLDW---NAPFIKWFEDGELNVSYNCLDRHL--KTRGDKVAIIWE 89 (637)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHh--cCeecCCcccccC---CCCCCccCCCCEeEHHHHHHHHhh--ccCCCCeEEEEE
Confidence 356888899999999999999877 4677788877654 345689999999999999998865 678999999986
Q ss_pred ccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHH
Q 007715 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (592)
Q Consensus 199 ~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~ 277 (592)
+. +++..+++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 90 ~~--~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~ 167 (637)
T PRK00174 90 GD--DPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRII 167 (637)
T ss_pred CC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHH
Confidence 53 122456899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCeeEEEEecceeccCccccchhhHhh---cCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCC
Q 007715 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (592)
Q Consensus 278 ~~~~~~iv~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (592)
+++++++|+++.....++..+....+.+ ..+. .++++...+.... ........|+++...... ......
T Consensus 168 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~ 241 (637)
T PRK00174 168 DAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD-WVEGRDLWWHELVAGASD-----ECEPEP 241 (637)
T ss_pred hcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC-cCCCCcccHHHHHhhcCC-----CCCccc
Confidence 9999999998876554444444333322 2221 2333322111100 001123346665543221 122234
Q ss_pred CCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHH-HHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEEEEeCC
Q 007715 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (592)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~ 430 (592)
..+++++||+|||||||+||||+++|++++... ......++++++|++++.++++|..+. +.++.+|++|+++++.++
T Consensus 242 ~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 321 (637)
T PRK00174 242 MDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEG 321 (637)
T ss_pred cCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECC
Confidence 567899999999999999999999999976443 334455788899999999999999886 568899999999999864
Q ss_pred C---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC--CCCCCccccEEEEecCCCChhhHHHHHHhcc--CCceecc
Q 007715 431 S---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAIIES 503 (592)
Q Consensus 431 ~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~--~~~l~n~ 503 (592)
. +++..++++|++++||++.++|++++.|++.... ...++++||.+++|||++++++..++.+.++ .++++|.
T Consensus 322 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~ 401 (637)
T PRK00174 322 VPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDT 401 (637)
T ss_pred CCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEec
Confidence 3 3688999999999999999999999999876432 3356789999999999999999999888765 3789999
Q ss_pred ccchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-------ecccCCCchhhccc
Q 007715 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-------FPLYLGASDRLLNA 572 (592)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-------~~gY~~~~~~~~~~ 572 (592)
||+||++..++..... ...+.+++|+|++|++++|+|++|+++|.|+. |||+| ++||+|+++++.+.
T Consensus 402 YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~--Gel~v~g~~p~~~~gy~~~~~~~~~~ 476 (637)
T PRK00174 402 WWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEG--GNLVIKDPWPGMMRTIYGDHERFVKT 476 (637)
T ss_pred ccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCCc--EEEEEcCCCCcccccccCCHHHHHHh
Confidence 9999998654432221 23346789999999999999999999999995 99998 47899999876443
|
|
| >TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-56 Score=495.43 Aligned_cols=461 Identities=25% Similarity=0.367 Sum_probs=356.3
Q ss_pred CCcCCCccccccccHHHHHHHhCCccccccCCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCCCCC
Q 007715 84 LYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKH 163 (592)
Q Consensus 84 ~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 163 (592)
..|.|+......++|..+.+..+.. |...+.+|+.+++++++++..||..+++...+.|..++.++++.. ...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~--~~~ 77 (652)
T TIGR01217 5 PLWQPDAQRIAQARMTRFQAWAGEH-----HGAAEGGYDALHRWSVDELDTFWKAVWEWFDVRFSTPCARVVDDR--TMP 77 (652)
T ss_pred CCCCCChhhcccchHHHHHHHHHHh-----hCCChhhHHHHHHHHHhCHHHHHHHHHHhCCcceeCCCceeeeCC--CCC
Confidence 4777776666667766554443322 333345689999999999999999999987789999999988652 234
Q ss_pred CCccCCCCcchhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC
Q 007715 164 GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM 242 (592)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~ 242 (592)
...|+.++.+|+++++++. .++++|+++.+. .+..+++||+||.++++++|++|+++ |++||+|+|+++|
T Consensus 78 ~~~wf~~~~~n~~~~~~~~------~~~~~a~~~~~~---~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n 148 (652)
T TIGR01217 78 GAQWFPGARLNYAENLLRA------AGTEPALLYVDE---THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPN 148 (652)
T ss_pred CCEECCCCeeeHHHHHhcc------CCCCeEEEEECC---CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Confidence 5789999999999999863 358999998754 23456899999999999999999999 9999999999999
Q ss_pred CHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhh---cCC--CcEEEEcCC
Q 007715 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP--LKAIVLPAI 317 (592)
Q Consensus 243 ~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~i~~~ 317 (592)
++++++++|||+++|++++|+++.++.+++.+++++++|++||+++.+.++++..+....+.+ .++ ..++++...
T Consensus 149 ~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~ 228 (652)
T TIGR01217 149 IPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYL 228 (652)
T ss_pred CHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCC
Confidence 999999999999999999999999999999999999999999999887766666555544432 222 223444322
Q ss_pred CCCC-CCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHH-HHHHHhhhhcCCC
Q 007715 318 GNDV-GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLK 395 (592)
Q Consensus 318 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~-~~~~~~~~~~~~~ 395 (592)
+... ......+...|+++...... .........++++++|+|||||||+||||+++|++++ +........++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~ 304 (652)
T TIGR01217 229 GPRETEAPKIDGALDLEDFTAAAQA----AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLG 304 (652)
T ss_pred CCcccccccccCcccHHHHHhcccC----CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCC
Confidence 1100 00001133457776543211 0111223456899999999999999999999999865 4444555567899
Q ss_pred CCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCC
Q 007715 396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDW 470 (592)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l 470 (592)
++|+++++++++|+.+.+ ++.+|+.|++++++++. +++..++++|++++||++.++|++++.+.+... ....++
T Consensus 305 ~~d~~~~~~~~~~~~~~~-~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l 383 (652)
T TIGR01217 305 PGDRLFYYTTTGWMMWNW-LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDL 383 (652)
T ss_pred CCcEEEEeCCcchhhhHH-HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCCh
Confidence 999999999999986544 56899999999999753 367889999999999999999998888765421 234678
Q ss_pred ccccEEEEecCCCChhhHHHHHHhcc-CCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCC
Q 007715 471 TKIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDD 549 (592)
Q Consensus 471 ~sLr~v~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G 549 (592)
++||.+++|||++++++.+++.+.++ ...+.+.||+||++.++....+..+...+++|+|.+|++++|+|++|+++ +|
T Consensus 384 ~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd~~g~~~-~g 462 (652)
T TIGR01217 384 SALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAVQSWDPEGKPV-TG 462 (652)
T ss_pred hheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCceEEECCCCCCC-CC
Confidence 99999999999999999999887764 35678999999986444333333344567899999999999999999999 48
Q ss_pred CCcceeEEE-------ecccCCCchh
Q 007715 550 QPCVGEVGL-------FPLYLGASDR 568 (592)
Q Consensus 550 ~~giGel~v-------~~gY~~~~~~ 568 (592)
+ +|||++ +.||+|+|+.
T Consensus 463 ~--~GEl~v~gp~p~~~~gy~~~~~~ 486 (652)
T TIGR01217 463 E--VGELVCTNPMPSMPIRFWNDPDG 486 (652)
T ss_pred C--ccEEEEecCCCccccceeCCCcc
Confidence 7 499998 3689999874
|
This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway. |
| >PRK10524 prpE propionyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-56 Score=494.59 Aligned_cols=437 Identities=20% Similarity=0.322 Sum_probs=344.4
Q ss_pred cCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCCCCCCCccCCCCcchhhhhhccccccCCCCCCceEEEEe
Q 007715 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (592)
Q Consensus 119 ~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~ 198 (592)
.+|+.+++++++++..||..+++. +.|++++.++++.. ..+...||.++.+|.+++++++++ +.+||++|+++.
T Consensus 2 ~~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~A~~~~ 75 (629)
T PRK10524 2 MSYSEFYQRSIDDPEAFWAEQARR--IDWQTPFTQVLDYS--NPPFARWFVGGRTNLCHNAVDRHL--AKRPEQLALIAV 75 (629)
T ss_pred hhHHHHHHHHhcCHHHHHHHHHHh--CCcccCchhhccCC--CCCcCccCCCcEeeHHHHHHHHhh--ccCCCCeEEEEE
Confidence 468899999999999999999996 57999999887542 234578999999999999998865 679999999985
Q ss_pred ccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHH
Q 007715 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (592)
Q Consensus 199 ~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~ 277 (592)
+. +.+..+.+||+||.++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 76 ~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~ 153 (629)
T PRK10524 76 ST--ETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARID 153 (629)
T ss_pred cC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHH
Confidence 42 122346899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCeeEEEEecceeccCccccchhhHhh---cC---CCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCC
Q 007715 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AA---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351 (592)
Q Consensus 278 ~~~~~~iv~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (592)
+++++++|+++...+.++.++....+.+ .. ...++++...... ..........|+++...... ...+..
T Consensus 154 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~ 228 (629)
T PRK10524 154 DAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAP-MARVAGRDVDYATLRAQHLG----ARVPVE 228 (629)
T ss_pred hcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC-cCcccCCcccHHHHHhcCCC----CCCCce
Confidence 9999999998876666665544433322 11 2234444321110 00011123346555443211 111122
Q ss_pred CCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHH-HHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEEEEeC
Q 007715 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC-TAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (592)
Q Consensus 352 ~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~ 429 (592)
...+++++||+|||||||+||||+++|++++.. .......++++++|++++.++++|+.+. +.++.+|+.|+++++++
T Consensus 229 ~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 308 (629)
T PRK10524 229 WLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYE 308 (629)
T ss_pred eeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEEC
Confidence 345789999999999999999999999997543 3334455788999999999999999886 66889999999999987
Q ss_pred CC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 430 GS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 430 ~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
+. +++..++++|+++++|++.++|++++.|.+... ....++++||.+++|||++++++.+++.+.++ ++++|.|
T Consensus 309 g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~-~~v~~~Y 387 (629)
T PRK10524 309 GLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEALG-VPVIDNY 387 (629)
T ss_pred CCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhcC-CCeEecc
Confidence 53 467889999999999999999999999987643 23456899999999999999999999888765 7899999
Q ss_pred cchhcccccccCCc---CCCCccCcccccCCCceEEEECC-CCCCCCCCCCcceeEEE--------ecccCCCchhhcc
Q 007715 505 GGTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGL--------FPLYLGASDRLLN 571 (592)
Q Consensus 505 G~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~v~IlD~-~g~~vp~G~~giGel~v--------~~gY~~~~~~~~~ 571 (592)
|+||++..++.... ....+.+++|+|++|++++|+|+ +|+++|+|+. |||+| ++||+++++++.+
T Consensus 388 G~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~--Gel~i~gp~~~~~~~~~~~~~~~~~~ 464 (629)
T PRK10524 388 WQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEK--GVLVIEGPLPPGCMQTVWGDDDRFVK 464 (629)
T ss_pred ccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCc--EEEEEcCCCChhhcCCccCChHHHHH
Confidence 99999743322221 12345678999999999999998 9999999995 99998 3578888877644
|
|
| >KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-52 Score=440.32 Aligned_cols=456 Identities=32% Similarity=0.467 Sum_probs=368.0
Q ss_pred CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCCCCCCCccCCCCcchhhhhhccccccCCCCCCce
Q 007715 114 YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTV 193 (592)
Q Consensus 114 y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~ 193 (592)
|...+.+|..|++.++++.+.+|..+++.+.... .++ ..............|+++..+|.+++|++++.... .+|++
T Consensus 6 ~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~w~~g~~ln~~~n~~~~~~~~~-~~~~~ 82 (626)
T KOG1175|consen 6 YKNSLSSYREFYRFSVEDPERFWGEVAKELHWKF-PWP-RCNKDENKGNPFTKWFPGAFLNACYNCLDRHIKEK-GGDKV 82 (626)
T ss_pred cCCCHHHHHHHHhhcccCHHHHHHHhhhhhhccc-Ccc-ccccccccCCCCccccccchhhhhHhhhhhhhhhc-CCCCc
Confidence 5666778899999999999999999999864222 222 22222224456779999999999999999976445 79999
Q ss_pred EEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHH
Q 007715 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (592)
Q Consensus 194 Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l 272 (592)
|+++.+.+ ++....+||.|+.+++.++|+.|++. +++||+|+++||+.+++++++|||.++|++++++...+++..+
T Consensus 83 a~~~~~~~--~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l 160 (626)
T KOG1175|consen 83 AIIFEGNE--GGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKEL 160 (626)
T ss_pred EEEEEecC--CCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHH
Confidence 99998652 33334599999999999999999988 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCC
Q 007715 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (592)
Q Consensus 273 ~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (592)
...++++++++|++.+...+..+.++......+.......................+..|++++..... ..+...
T Consensus 161 ~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~-----~~~~~~ 235 (626)
T KOG1175|consen 161 LDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASP-----EHPCVP 235 (626)
T ss_pred HHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCC-----CCCcee
Confidence 999999999999999999999999888877765543211110000000000001124567776665543 223556
Q ss_pred CCCCCeEEEEeCCCCCCCCcEEEeCCchH-HHHHHHhhhhcCCCCCCEEEEecccchhchhHH-HHHHHHcCCEEEEeCC
Q 007715 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSS-IRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQG 430 (592)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l-~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G~~lvl~~~ 430 (592)
.+.+|+.+|+|||||||.||||.+++.+. +..+......++++++|++++++.++|+.+.+. .+++|++|+++++.++
T Consensus 236 ~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g 315 (626)
T KOG1175|consen 236 VKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEG 315 (626)
T ss_pred cCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcC
Confidence 77899999999999999999999999875 556666778899999999999999999999855 7779999999999997
Q ss_pred CC-ChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccch
Q 007715 431 SP-LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (592)
Q Consensus 431 ~~-~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (592)
.+ ++..+++++.+++||++++.|++++.|.+... ...+++++||.+.++||+++++...|+.+.++..+|++.||+|
T Consensus 316 ~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qt 395 (626)
T KOG1175|consen 316 PPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQT 395 (626)
T ss_pred CCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeee
Confidence 76 89999999999999999999999998776543 3445557899999999999999999999988755799999999
Q ss_pred hcccccccCCcCC-CCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE--------ecccCCCchhhccccccccc
Q 007715 508 ELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL--------FPLYLGASDRLLNADHEEVY 578 (592)
Q Consensus 508 E~~~~~~~~~~~~-~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v--------~~gY~~~~~~~~~~~~~~~~ 578 (592)
|++..++...... +.+++++|+|.+|+.+.|+|++|++++++. |.|+|++ +++|+||++++ .+.|
T Consensus 396 EtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf-----~~~y 469 (626)
T KOG1175|consen 396 ETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERF-----RAAY 469 (626)
T ss_pred ccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHh-----hhhh
Confidence 9998777766665 788999999999999999999999999875 4699998 56777777744 3445
Q ss_pred cccCcCC
Q 007715 579 FRGMPMY 585 (592)
Q Consensus 579 f~~~~~~ 585 (592)
|+++|||
T Consensus 470 f~k~pg~ 476 (626)
T KOG1175|consen 470 FKKFPGY 476 (626)
T ss_pred cccCCce
Confidence 5554444
|
|
| >COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-54 Score=478.90 Aligned_cols=511 Identities=19% Similarity=0.176 Sum_probs=394.2
Q ss_pred HHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCC-C-----
Q 007715 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP-L----- 84 (592)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~-~----- 84 (592)
+..++++......+|.++++++++....+ +||++||+. +++.+...|..+ .|+|+++|++++...... .
T Consensus 66 n~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~h~~~p~~~-l~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~ 141 (642)
T COG1020 66 NTLPLRLDISGRVTFAELLARLRELALGALEHQDLPGEQ-LVERLGRERSLS---EPLFDVVFVLQNGPTAGLKLPGLRV 141 (642)
T ss_pred eeeeeeeccCCCCCHHHHHHHHHHHHHHHhhccCCCHHH-HHHHHhhhccCC---CCceeeEEEecCccccccccccccc
Confidence 46788888999999999999999998877 999999999 999998888855 566999999998765431 1
Q ss_pred -CcCCCccccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeeccccc--cccCCCC
Q 007715 85 -YWFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKC--ILDRTDK 160 (592)
Q Consensus 85 -~~~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~ 160 (592)
.+... ....++|+.+.+.+. ++...+ |.. ++|+..+++++..+|..++..+..++...... ++...+.
T Consensus 142 ~~~~~~-~~~~~~d~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ll~~~e~ 213 (642)
T COG1020 142 EELGIE-TPAAKLDLALAVVEG--GLRLSFDYAR-----ELFDAETIERELRHFLQLLAALADAPRTSLSALPLLLPSER 213 (642)
T ss_pred cccccc-CcccccceEEEEEeC--ceEEEEEeec-----ccCCHHHHHHHHHHHHHHHHHHHhCcccCcccCCCCCHHHH
Confidence 11111 345677887777665 666777 877 99999999999999999999987666623322 2222222
Q ss_pred CCCCCccCCCCcchhh-hhhccc--cccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEE
Q 007715 161 SKHGGTWLPGSVLNIA-ECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAI 236 (592)
Q Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V 236 (592)
..|+ ....... ..+++. ..++...|+++|+++.+. .+||+||+.+++++|+.|.+. ++++++|
T Consensus 214 ----~~~~-~~~~~~~~~~~i~~~f~~~a~~~p~~~a~~~~~~--------~lty~el~~~a~~la~~l~~~g~~~~~~V 280 (642)
T COG1020 214 ----EVWN-ALAAPIPLRLTIHLLFEEQAATTPDAVALVRGGQ--------QLTYAELDARANRLARLLISLGVGPGETV 280 (642)
T ss_pred ----hhcc-ccccCCCccchHHHHHHHHHHhCCCceeEecCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCeE
Confidence 2254 2222211 112222 235689999999999866 899999999999999999999 9999999
Q ss_pred EEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcC
Q 007715 237 AIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPA 316 (592)
Q Consensus 237 ~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 316 (592)
+++++++++++++++|++|+|++|||+||.+|.+|+.+++++++++++++...........+ . +
T Consensus 281 ~i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~----~-- 344 (642)
T COG1020 281 AILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLP----------G----L-- 344 (642)
T ss_pred EEEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCC----------c----c--
Confidence 99999999999999999999999999999999999999999999999999853211000000 0 0
Q ss_pred CCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCC
Q 007715 317 IGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV 396 (592)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~ 396 (592)
..+........ .........+++++|++|||||||+||||+++|+++.+.+.+....+.++.
T Consensus 345 --------------~~~~~~~~~~~----~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~ 406 (642)
T COG1020 345 --------------ALDDALSEIPD----TDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDA 406 (642)
T ss_pred --------------ccccccccCCc----cCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCc
Confidence 00000000000 000012345689999999999999999999999999998888888899999
Q ss_pred CCEEEEecccchhchhHHHHHHHHcCCEEEEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCC--CCCCcc
Q 007715 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTK 472 (592)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~s 472 (592)
.|+++..++++||.+.+++|.+++.|+++++.+.. .++..+.+.++++++|++..+|+++..+....... ....+.
T Consensus 407 ~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~ 486 (642)
T COG1020 407 DDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCER 486 (642)
T ss_pred ccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCccc
Confidence 99999999999999999999999999999998743 47889999999999999999999999998763221 122335
Q ss_pred ccEEEEecCCCChhhHHHHHHhcc-CCceeccccchhcccccccCCcCCCCc-cCcccccCCCceEEEECCCCCCCCCCC
Q 007715 473 IRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQA-FGAFSTATMTAGLVILDECGVPYPDDQ 550 (592)
Q Consensus 473 Lr~v~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~-~~~iG~p~~~~~v~IlD~~g~~vp~G~ 550 (592)
+|.+++|||+++..+...+....+ ...+.|.||+||+++.+.......... ..++|+|++|++++|+|+.++++|.|+
T Consensus 487 lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv 566 (642)
T COG1020 487 LRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGV 566 (642)
T ss_pred ccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCC
Confidence 999999999999999887766544 467999999999776544333222111 579999999999999999999999999
Q ss_pred CcceeEEE-----ecccCCCchhhccccccccccccCcCCcceeccC
Q 007715 551 PCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMVHVD 592 (592)
Q Consensus 551 ~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~~gy~~~d 592 (592)
+ ||++| ++||+++|+.+...+... +.|+|||
T Consensus 567 ~--gel~i~g~~~a~gy~~~p~lt~~~f~~~---------~~y~tgD 602 (642)
T COG1020 567 P--GELYIAGLGLALGYLNRPDLTAERFIAL---------RLYRTGD 602 (642)
T ss_pred C--eeeEECCcchhhhhcCChhhhHHHhhhc---------cCccCCC
Confidence 6 99998 899999999873332222 3677666
|
|
| >KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-51 Score=428.96 Aligned_cols=379 Identities=25% Similarity=0.269 Sum_probs=304.4
Q ss_pred CCCCc-eEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh---cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 188 KEDNT-VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM---FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 188 ~~pd~-~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~---v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
..+++ +++++... ..+.+||+|+.+++.|+|.+|.++ +++||+|++++||+++++++++||+.+|+++.|+
T Consensus 28 ~~~~~~~~~i~~~~-----~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~ 102 (537)
T KOG1176|consen 28 VYLDRNTSLVYQDS-----DGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPL 102 (537)
T ss_pred ccccCcceEEEecC-----CCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccccc
Confidence 34444 78887662 013999999999999999999965 7889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCccc-HHHhhccCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLS-WKDFLSSVDYH 342 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 342 (592)
+|.+.+.++.+.++++++++++++.... +........+...++++................. +.++......
T Consensus 103 Np~~~~~ei~~~~~~s~~kiif~d~~~~------~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (537)
T KOG1176|consen 103 NPRLTASEIAKQLKDSKPKLIFVDEDFY------DKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP- 175 (537)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEcCchH------HHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC-
Confidence 9999999999999999999999998642 3333334344455555544311111110011111 3333332221
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcC
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (592)
.. ..+...+|++.|+|||||||.||||++||++++...........++..|+.++..|++|..|++.++.+++.|
T Consensus 176 ----~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~ 250 (537)
T KOG1176|consen 176 ----DG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAG 250 (537)
T ss_pred ----cc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhC
Confidence 11 3455679999999999999999999999999887766655566677799999999999999998888877777
Q ss_pred CEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceec
Q 007715 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (592)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (592)
++.++....+++..+++.|++|+||++.++|+++..|++.+....++++++|.+.+||+++++++.+++.++++...+.+
T Consensus 251 ~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q 330 (537)
T KOG1176|consen 251 GTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQ 330 (537)
T ss_pred CceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEE
Confidence 77777776779999999999999999999999999999987667789999999999999999999999999999788999
Q ss_pred cccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccc
Q 007715 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~ 577 (592)
+||+||+++..+.+......+++++|++++|.++.|+++.|+.+++++. ||||+ +.||++||++|......++
T Consensus 331 ~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~~~~--GEI~vrg~~imkGY~~NpeaT~~~~~~~G 408 (537)
T KOG1176|consen 331 GYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGPNQT--GEICVRGPQVMKGYLKNPEATKEAFDDDG 408 (537)
T ss_pred eeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCCCCc--eEEEEECcccchhhcCChHHHHhhcccCC
Confidence 9999999965444333322478999999999999999999999999995 99999 8999999999865555535
Q ss_pred ccc-cCcCC
Q 007715 578 YFR-GMPMY 585 (592)
Q Consensus 578 ~f~-~~~~~ 585 (592)
||. ||-||
T Consensus 409 W~~TGDiGy 417 (537)
T KOG1176|consen 409 WFHTGDLGY 417 (537)
T ss_pred ccccCceEE
Confidence 664 45455
|
|
| >PLN02614 long-chain acyl-CoA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-50 Score=451.22 Aligned_cols=382 Identities=16% Similarity=0.148 Sum_probs=281.5
Q ss_pred CCCCCCceEEEEecc-CCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~-~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++++||++|+.+.+. .+..++++.+||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||+
T Consensus 55 a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl 134 (666)
T PLN02614 55 VEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPL 134 (666)
T ss_pred HHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEe
Confidence 478999999986421 00113455799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC------CcEEEEcCCCCCCC---CCCccCcccHHH
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP------LKAIVLPAIGNDVG---IPLREQDLSWKD 334 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~---~~~~~~~~~~~~ 334 (592)
++.++.+++.+++++++++++|+++.. ...+....+ ..++.+........ ........++++
T Consensus 135 ~~~~~~~~l~~il~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (666)
T PLN02614 135 YDTLGAGAVEFIISHSEVSIVFVEEKK---------ISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDE 205 (666)
T ss_pred cCCCCHHHHHHHHhccCCCEEEECHHH---------HHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHH
Confidence 999999999999999999999998642 122212111 11222211000000 000001235666
Q ss_pred hhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhc-----CCCCCCEEEEecccchh
Q 007715 335 FLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-----DLKVGDVYCWPTNLGWV 409 (592)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~~~ 409 (592)
++..... . ........++|+|+|+|||||||.||||+++|++++..+.+....+ +++++|++++++|++|.
T Consensus 206 ~~~~~~~--~--~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 281 (666)
T PLN02614 206 FLKLGEG--K--QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHI 281 (666)
T ss_pred HHhhccc--C--CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHH
Confidence 6543321 0 0111223579999999999999999999999999987766543332 57889999999999998
Q ss_pred chhHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC------------------------
Q 007715 410 MGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL------------------------ 465 (592)
Q Consensus 410 ~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~------------------------ 465 (592)
.+....+..+..|+++++.+ .++..+++.|+++++|+++++|+++..|.+....
T Consensus 282 ~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 359 (666)
T PLN02614 282 FDRVIEECFIQHGAAIGFWR--GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNM 359 (666)
T ss_pred HHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 88755566788999998875 3778999999999999999999999987642100
Q ss_pred -------CCC-------------CC-ccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCcc
Q 007715 466 -------EGL-------------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAF 524 (592)
Q Consensus 466 -------~~~-------------~l-~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~ 524 (592)
... .+ ++||.+++||+++++.+ .++...+++++++|+||+||+++..+...+....+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 438 (666)
T PLN02614 360 KKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDML 438 (666)
T ss_pred HcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeeccccCCcC
Confidence 000 01 68999999999999875 555566656889999999999754333222222346
Q ss_pred CcccccCCCceEEEEC-CC--CCCCCCCCCcceeEEE-----ecccCCCchhhccccccccccccCcCC
Q 007715 525 GAFSTATMTAGLVILD-EC--GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY 585 (592)
Q Consensus 525 ~~iG~p~~~~~v~IlD-~~--g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~ 585 (592)
+++|+|+||++++|+| ++ ++++|+|+. |||+| +.||+++|+.|.+....+||.+||-|+
T Consensus 439 gsvG~p~pg~evki~d~~~~~~~~~~~g~~--GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~ 505 (666)
T PLN02614 439 GTVGPPVPNVDIRLESVPEMEYDALASTPR--GEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGE 505 (666)
T ss_pred CcccCcCCceEEEEeeecccCcccCCCCCC--ceEEEcCCcccccccCCHHHhhhhhccCCcccceEEE
Confidence 8999999999999998 43 478999985 99999 789999999886554444555555544
|
|
| >PRK07788 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-49 Score=437.65 Aligned_cols=370 Identities=19% Similarity=0.176 Sum_probs=294.4
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+++.+||++|+++.++ ++||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|+++||+
T Consensus 58 ~a~~~pd~~Al~~~~~--------~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l 129 (549)
T PRK07788 58 AARRAPDRAALIDERG--------TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILL 129 (549)
T ss_pred HHHHCCCceEEEECCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 3488999999998776 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
++.++.+++.+++++++++++|+++.+.. ....+.........++....... ....+...++++......
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-- 199 (549)
T PRK07788 130 NTGFSGPQLAEVAAREGVKALVYDDEFTD------LLSALPPDLGRLRAWGGNPDDDE--PSGSTDETLDDLIAGSST-- 199 (549)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhHH------HHHhhccccccceEEEEecCccc--cCCcCcccHHHHhcCCCC--
Confidence 99999999999999999999999875421 11121111221111111111000 011234456776653221
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCC
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (592)
...+..+++.++++|||||||+||||+++|+++.+.+......+++.++|+++...|++|..++..++.++..|+
T Consensus 200 -----~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~ 274 (549)
T PRK07788 200 -----APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGS 274 (549)
T ss_pred -----CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCC
Confidence 111234578899999999999999999999999888777777788899999999999999999877888999999
Q ss_pred EEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC--CCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 424 ~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
++++.. .+++..+++.|++++||++.++|+++..|++.... ...++++||.+++|||++++++.+++.+.++ .+++
T Consensus 275 ~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~l~ 352 (549)
T PRK07788 275 TVVLRR-RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFG-PVLY 352 (549)
T ss_pred EEEECC-CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhC-ccce
Confidence 999874 67889999999999999999999999999876543 4556889999999999999999999988775 6899
Q ss_pred ccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccc
Q 007715 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEE 576 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~ 576 (592)
|.||+||++..++.........++++|+|++|++++|+|++++++|+|++ |||+| +.||+++++. ....+
T Consensus 353 ~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gY~~~~~~---~~~~g 427 (549)
T PRK07788 353 NLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVV--GRIFVGNGFPFEGYTDGRDK---QIIDG 427 (549)
T ss_pred eccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCe--EEEEEeCCCccccccCCCcc---cccCC
Confidence 99999999754433222223346789999999999999999999999994 99999 6899998874 22234
Q ss_pred cccccCcC
Q 007715 577 VYFRGMPM 584 (592)
Q Consensus 577 ~~f~~~~~ 584 (592)
||.+||-+
T Consensus 428 ~~~TGDl~ 435 (549)
T PRK07788 428 LLSSGDVG 435 (549)
T ss_pred ceecCceE
Confidence 44455433
|
|
| >PRK04319 acetyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-49 Score=437.93 Aligned_cols=394 Identities=21% Similarity=0.285 Sum_probs=313.2
Q ss_pred ccCCCCcchhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 007715 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (592)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~ 244 (592)
.|+.+...|..+.++++++ +..+||++|+++.+.. ..+++||+||.++++++|++|.+. +++||+|+|+++|++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~----~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~ 109 (570)
T PRK04319 35 SWLETGKVNIAYEAIDRHA-DGGRKDKVALRYLDAS----RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIP 109 (570)
T ss_pred ccCCCCceeHHHHHHHHhh-ccCCCCceEEEEECCC----CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH
Confidence 6777788899988888764 2357999999986531 234899999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCC
Q 007715 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG 322 (592)
Q Consensus 245 e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~ 322 (592)
++++++|||+++|++++|+++.++.+++.+++++++++++|+++........ ...+. .++++.....
T Consensus 110 ~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--- 178 (570)
T PRK04319 110 ELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--------DDLPSLKHVLLVGEDVE--- 178 (570)
T ss_pred HHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--------hcCCCceEEEEECCCcC---
Confidence 9999999999999999999999999999999999999999998764321110 11121 2222221110
Q ss_pred CCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEE
Q 007715 323 IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCW 402 (592)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~ 402 (592)
...+...+.++...... ........++++++|+|||||||.||||+++|++++..+......++++++|++++
T Consensus 179 --~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~ 251 (570)
T PRK04319 179 --EGPGTLDFNALMEQASD-----EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWC 251 (570)
T ss_pred --CCcCccCHHHHHhhcCC-----cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEe
Confidence 11233456665543221 11223345689999999999999999999999999887777777788999999999
Q ss_pred ecccchhchh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEe
Q 007715 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFAST 479 (592)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~g 479 (592)
..+++|..+. +.++.+++.|+++++.+..+++..+++.|+++++|+++++|++++.|.+... ....++++||.+++|
T Consensus 252 ~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~g 331 (570)
T PRK04319 252 TADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSV 331 (570)
T ss_pred cCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEc
Confidence 9999998876 6788999999999998777889999999999999999999999999987542 234568899999999
Q ss_pred cCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-
Q 007715 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL- 558 (592)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v- 558 (592)
|+++++++.+++...++ .++++.||+||++..++.........++++|+|++|++++|+|++++++|+|+. |||++
T Consensus 332 G~~l~~~~~~~~~~~~g-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~--Gel~i~ 408 (570)
T PRK04319 332 GEPLNPEVVRWGMKVFG-LPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPNRM--GNLAIK 408 (570)
T ss_pred ccCCCHHHHHHHHHHhC-CCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCCCc--eEEEEc
Confidence 99999999998887765 789999999999865443322223456789999999999999999999999995 99998
Q ss_pred ------ecccCCCchhhccccccccccccCcCC
Q 007715 559 ------FPLYLGASDRLLNADHEEVYFRGMPMY 585 (592)
Q Consensus 559 ------~~gY~~~~~~~~~~~~~~~~f~~~~~~ 585 (592)
++||+|+++.+......+||.++|-++
T Consensus 409 ~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~ 441 (570)
T PRK04319 409 KGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAY 441 (570)
T ss_pred CCCChHHhHhcCCHHHhhhhhcCCceEeCcEEE
Confidence 359999999875444344555665444
|
|
| >COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-49 Score=432.97 Aligned_cols=374 Identities=23% Similarity=0.245 Sum_probs=295.3
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+|+++|+++.+.. .++||+||+++++++|++|++. |++||+|+|+++|+++++++++||+++|++.+||+
T Consensus 21 a~~~~~~~a~~~~~~~------~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpln 94 (534)
T COG0318 21 ARRNPDRPALIFLGRG------GRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLN 94 (534)
T ss_pred HHhCCCceEEEEcCCC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeecC
Confidence 3789999999998771 0399999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCc-ccHHHhhccCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQD-LSWKDFLSSVDYHP 343 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 343 (592)
|.+..+++.++++++++++++++..+. +....+....+....+....... ... ..+++.......
T Consensus 95 ~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-- 160 (534)
T COG0318 95 PRLTPRELAYILNDAGAKVLITSAEFA------ALLEAVAEALPVVLVVLLVGDAD------DRLPITLEALAAEGPG-- 160 (534)
T ss_pred cccCHHHHHHHHHhcCCeEEEEcccch------hHHHHHhccCCcceEEEeccccc------ccccccHHHHhhccCC--
Confidence 999999999999999999999998531 22222222222111121111100 000 245555332211
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC--CCCCCEEEEecccchhchhHH-HHHHHH
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPVI-LFSSFL 420 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~~-~~~~L~ 420 (592)
.........++|+|+|+|||||||.||||++||+|++.+.......+. +++.|++++..|++|+.++.. ++.+++
T Consensus 161 --~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~ 238 (534)
T COG0318 161 --PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLL 238 (534)
T ss_pred --cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHH
Confidence 111112267899999999999999999999999999888777777777 899999999999999999965 445599
Q ss_pred cCCEEEEeCC-CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCcc-ccEEEEecCCCChhhHHHHHHhccCC
Q 007715 421 NGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK-IRSFASTGETSNVDDDLWLSSKAWYN 498 (592)
Q Consensus 421 ~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~s-Lr~v~~gGe~l~~~~~~~~~~~~~~~ 498 (592)
.|+++++.++ .+++..++..+.++++|++.++|+++..|+++......++++ ||.+++||+++++++++++.+.++..
T Consensus 239 ~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~ 318 (534)
T COG0318 239 GGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPI 318 (534)
T ss_pred cCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCC
Confidence 9999999874 578899999999999999999999999999887665555665 99999999999999999999998756
Q ss_pred ceeccccchhcccccccCCcCC-CCccCcccccCCCceEEEECCCCC-CCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 499 AIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGV-PYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~v~IlD~~g~-~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
++++.||+||++..++...... ....+++|+|+||++++|+|+++. ++| |+ +|||+| +.||+++|+.+..
T Consensus 319 ~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~--vGei~irgp~v~~GY~~~pe~t~~ 395 (534)
T COG0318 319 AILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GE--VGEIWVRGPNVMKGYWNRPEATAE 395 (534)
T ss_pred ceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CC--ceEEEEECchhhhhhcCChHHHHH
Confidence 8999999999986555544433 235677899999999999997665 666 88 599999 8999999998855
Q ss_pred cccccccc-ccCcC
Q 007715 572 ADHEEVYF-RGMPM 584 (592)
Q Consensus 572 ~~~~~~~f-~~~~~ 584 (592)
....+.|| +||-+
T Consensus 396 ~f~~~gW~~TGDlg 409 (534)
T COG0318 396 AFDEDGWLRTGDLG 409 (534)
T ss_pred hhccCCeeeecceE
Confidence 33332455 45544
|
|
| >PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-49 Score=435.78 Aligned_cols=358 Identities=18% Similarity=0.199 Sum_probs=281.6
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
++++|+++|+.+.+.+ ++||+||.++++++|++|.+. +||+|+|+++|++++++++|||+++|+++|||++
T Consensus 29 ~~~~p~~~a~~~~~~~-------~~Ty~el~~~~~~lA~~L~~~--~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~ 99 (539)
T PRK06334 29 CSEMTTATVCWDEQLG-------KLSYNQVRKAVIALATKVSKY--PDQHIGIMMPASAGAYIAYFATLLSGKIPVMINW 99 (539)
T ss_pred HHhCCCceEEEeCCCC-------cccHHHHHHHHHHHHHHHhhc--cCCeEEEEcCCchHHHHHHHHHHhcCCeeEecCc
Confidence 4789999999876532 899999999999999999874 9999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhc---CCCcEEEEcCCCCCCCCCCccCcccHHHhhccC---
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV--- 339 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--- 339 (592)
.++.+++.++++++++++||+++++.. ....+... .+..++.+.... ....+.+.....
T Consensus 100 ~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~ 164 (539)
T PRK06334 100 SQGLREVTACANLVGVTHVLTSKQLMQ------HLAQTHGEDAEYPFSLIYMEEVR---------KELSFWEKCRIGIYM 164 (539)
T ss_pred ccchHHHHHHHHHcCCCEEEehHHHHH------HHhhhhhccccccccEEEEehhh---------hhccHHHhhhhhhhh
Confidence 999999999999999999999875321 11111110 111222222100 000111110000
Q ss_pred --CCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHH
Q 007715 340 --DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILF 416 (592)
Q Consensus 340 --~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~ 416 (592)
...............++++++|+|||||||+||||+++|+++.....+....++++++|++++..|++|..++ ..++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~ 244 (539)
T PRK06334 165 SIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCTL 244 (539)
T ss_pred cCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHHH
Confidence 0000000011123467899999999999999999999999998877777677888999999999999998887 4578
Q ss_pred HHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhcc
Q 007715 417 SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAW 496 (592)
Q Consensus 417 ~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~ 496 (592)
.++..|+++++.....++..+++.|+++++|++.++|+++..|++.......++++||.+++||+++++++.+++.+.++
T Consensus 245 ~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~ 324 (539)
T PRK06334 245 FPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFP 324 (539)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCC
Confidence 89999999998765578899999999999999999999999998765444566899999999999999999999998887
Q ss_pred CCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECC-CCCCCCCCCCcceeEEE-----ecccCCCchhh
Q 007715 497 YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (592)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~-~g~~vp~G~~giGel~v-----~~gY~~~~~~~ 569 (592)
+++++|.||+||++..++...........++|+|++|++++|+|+ +++++|+|++ |||+| ++||+++|+.+
T Consensus 325 ~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~GY~~~~~~~ 401 (539)
T PRK06334 325 HIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGET--GLVLTRGTSLFSGYLGEDFGQ 401 (539)
T ss_pred CCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCCCCce--EEEEEecCcccccccCCcccc
Confidence 789999999999986544333222334568999999999999995 5899999995 99999 78999999854
|
|
| >KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-50 Score=394.21 Aligned_cols=383 Identities=19% Similarity=0.217 Sum_probs=313.6
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
+++.||+.|+++...+ .++||+|+.+.++++|+.|..+ +++||||+|..||+.+|+..+|||.++|.+.|++|
T Consensus 60 t~~v~dkea~Vf~~eg------~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~N 133 (596)
T KOG1177|consen 60 TERVPDKEAAVFDHEG------IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLN 133 (596)
T ss_pred hhccCcceEEEEeecc------chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccC
Confidence 3788999999886542 3799999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcC----------------CCcEEEEcCCCCCCCCCCccC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA----------------PLKAIVLPAIGNDVGIPLREQ 328 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~i~~~~~~~~~~~~~~ 328 (592)
|.|+.+++++.|+..+++++|+...+ +.-+..+.+.+.+ +....++..+.+. .-++
T Consensus 134 P~Yq~~elr~~L~k~~~k~l~~p~~~----k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~----~~~G 205 (596)
T KOG1177|consen 134 PAYQSEELRYVLKKVGCKALFAPPQF----KTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDH----PLPG 205 (596)
T ss_pred cccccHHHHHHHhhcCeEEEEccchh----hhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCC----cCCC
Confidence 99999999999999999999998765 2222233332221 2222222222111 1246
Q ss_pred cccHHHhhccCCCCCCC-CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccc
Q 007715 329 DLSWKDFLSSVDYHPRP-NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLG 407 (592)
Q Consensus 329 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 407 (592)
...+++++......... .........|||++.|.|||||||.|||+.+||.|++|+......++++..++++++..|+.
T Consensus 206 a~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~ 285 (596)
T KOG1177|consen 206 AFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLY 285 (596)
T ss_pred ceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchH
Confidence 66778877655431000 01112356789999999999999999999999999999998888899999988999999999
Q ss_pred hhchh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChh
Q 007715 408 WVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (592)
Q Consensus 408 ~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~ 486 (592)
|.++. ..++.+|+.|+|+|++...+++...++.|.++++|.++.+|+++..|++.......+++++|..+.||+++|++
T Consensus 286 H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~e 365 (596)
T KOG1177|consen 286 HCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPE 365 (596)
T ss_pred HHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHH
Confidence 99995 67889999999999998899999999999999999999999999999998888889999999999999999999
Q ss_pred hHHHHHHhccCCceeccccchhcccccccCCcCC--CCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----e
Q 007715 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----F 559 (592)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~ 559 (592)
+.+.+.....-..+...||+||++.........+ .++..++|+.+++.+..|+|..|.++|.|++ |||++ +
T Consensus 366 Llk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g~~v~~~~~--Gel~iRGY~tM 443 (596)
T KOG1177|consen 366 LLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDGSEVPLGTK--GELLIRGYSTM 443 (596)
T ss_pred HHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCCCccccCCC--ceEEEEechhh
Confidence 9998877544335889999999986544333322 2345689999999999999999999999997 99999 8
Q ss_pred cccCCCchhhcccccccccc-ccCcC
Q 007715 560 PLYLGASDRLLNADHEEVYF-RGMPM 584 (592)
Q Consensus 560 ~gY~~~~~~~~~~~~~~~~f-~~~~~ 584 (592)
.||||++++|..+..++.|+ +||-+
T Consensus 444 l~Ywg~~~kT~eti~~drW~~TGDi~ 469 (596)
T KOG1177|consen 444 LGYWGEEEKTKETIGNDRWYDTGDIA 469 (596)
T ss_pred eeecCCcccchhhcccccceecCceE
Confidence 99999999887777665555 44433
|
|
| >PLN02736 long-chain acyl-CoA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-49 Score=441.42 Aligned_cols=384 Identities=16% Similarity=0.104 Sum_probs=287.4
Q ss_pred CCCCCCceEEEEec-cCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWRE-DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~-~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++++||++|+.+.- ..+..+.++.+||+||.++++++|++|+++ +++||+|+|+++|+++++++++||+++|+++||+
T Consensus 54 a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl 133 (651)
T PLN02736 54 VETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPL 133 (651)
T ss_pred HHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 47899999996421 111123456899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCC----CCCccCcccHHHhhcc
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVG----IPLREQDLSWKDFLSS 338 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~ 338 (592)
++.++.+++.+++++++++++|+++... +....+....+. +.+++........ .........|+++...
T Consensus 134 ~~~~~~~~l~~il~~~~~~~l~~~~~~~------~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (651)
T PLN02736 134 YDTLGPDAVKFIVNHAEVAAIFCVPQTL------NTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQ 207 (651)
T ss_pred ecCCCHHHHHHHHhccCCCEEEECHHHH------HHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHh
Confidence 9999999999999999999999987532 122222222332 2222211100000 0000123456776654
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHH
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (592)
... . ........++|+|+|+|||||||.||||++||++++..+.+....+++.++|++++.+|++|+.+.+.++.+
T Consensus 208 ~~~--~--~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~~~~ 283 (651)
T PLN02736 208 GRS--S--PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQIVM 283 (651)
T ss_pred ccc--C--CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHHHHHH
Confidence 322 0 111223467999999999999999999999999999888877777888999999999999999998888899
Q ss_pred HHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc-----------------------------CCC--
Q 007715 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-----------------------------LEG-- 467 (592)
Q Consensus 419 L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~-----------------------------~~~-- 467 (592)
|..|+++++.+. ++..+++.|+++++|+++.+|+++..|.+... ...
T Consensus 284 l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (651)
T PLN02736 284 LHYGVAVGFYQG--DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPM 361 (651)
T ss_pred HHcCCEEEEeCC--CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCch
Confidence 999999998764 66789999999999999999999988764310 000
Q ss_pred ----------CCC-ccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceE
Q 007715 468 ----------LDW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGL 536 (592)
Q Consensus 468 ----------~~l-~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v 536 (592)
..+ ++||.+++||+++++++.+++...++ ++++|.||+||+++.++... ......+++|+|+||+++
T Consensus 362 ~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g-~~~~~~YG~TE~~~~~~~~~-~~~~~~~~vG~p~pg~~v 439 (651)
T PLN02736 362 WDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG-GRVLEGYGMTETSCVISGMD-EGDNLSGHVGSPNPACEV 439 (651)
T ss_pred HHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC-CCeEEEechHHhchheeccC-CCCCCCCccCCccCceEE
Confidence 001 48999999999999999998887665 78999999999976443322 233456899999999999
Q ss_pred EEEC-CCCCC---CCCCCCcceeEEE-----ecccCCCchhhcccccccccc-ccCcCC
Q 007715 537 VILD-ECGVP---YPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF-RGMPMY 585 (592)
Q Consensus 537 ~IlD-~~g~~---vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f-~~~~~~ 585 (592)
+|+| +++.. ..++. .|||+| +.||+++|+.+.+....++|| +||-|+
T Consensus 440 ~i~d~~~~~~~~~~~~~~--~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~ 496 (651)
T PLN02736 440 KLVDVPEMNYTSEDQPYP--RGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGL 496 (651)
T ss_pred EEEEccccCcccCCCCCC--CceEEecCCccccccccCHHHHHhhhccCCCeeccceEE
Confidence 9999 33322 22233 499998 899999999885554434455 454443
|
|
| >PLN02861 long-chain-fatty-acid-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-49 Score=441.08 Aligned_cols=384 Identities=18% Similarity=0.150 Sum_probs=277.9
Q ss_pred CCCCCCceEEEEecc-CCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~-~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++++|+++|+.+... ....++++.+||+||.++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++|||
T Consensus 53 ~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl 132 (660)
T PLN02861 53 VKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPL 132 (660)
T ss_pred HHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 478999999976310 00124566899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC---CcEEEEcCCCCCCC---CCCccCcccHHHhhc
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---LKAIVLPAIGNDVG---IPLREQDLSWKDFLS 337 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~ 337 (592)
++.++.+++.+++++++++++|+++... +.........+ ..++.+........ ........+|+++..
T Consensus 133 ~~~~~~~~l~~il~~s~~~~v~~~~~~~------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (660)
T PLN02861 133 YDTLGANAVEFIINHAEVSIAFVQESKI------SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSL 206 (660)
T ss_pred cCCCCHHHHHHHHHcCCCCEEEECHHHH------HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHH
Confidence 9999999999999999999999976421 11111112111 12222221100000 000011235666654
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC-----CCCCCEEEEecccchhchh
Q 007715 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-----LKVGDVYCWPTNLGWVMGP 412 (592)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-----~~~~d~~l~~~~~~~~~~~ 412 (592)
.... ........++|+|+|+|||||||.||||+++|++++..+......++ +.++|++++++|++|..+.
T Consensus 207 ~~~~-----~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~ 281 (660)
T PLN02861 207 MGSL-----DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQ 281 (660)
T ss_pred hCcc-----cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHH
Confidence 3321 01112345799999999999999999999999999877665444333 4688999999999999887
Q ss_pred HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcC-----------------------------
Q 007715 413 VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----------------------------- 463 (592)
Q Consensus 413 ~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~----------------------------- 463 (592)
...+.+++.|+++++.. .++..+++.|+++++|+++++|+++..|.+..
T Consensus 282 ~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~ 359 (660)
T PLN02861 282 VIETYCISKGASIGFWQ--GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKG 359 (660)
T ss_pred HHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcC
Confidence 55556899999999874 46789999999999999999999999886410
Q ss_pred --------cCCCC-------CC-ccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcc
Q 007715 464 --------CLEGL-------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAF 527 (592)
Q Consensus 464 --------~~~~~-------~l-~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~i 527 (592)
..... .+ ++||.+++||+++++++.+ +...++..+++|.||+||+++.++..........+++
T Consensus 360 ~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsv 438 (660)
T PLN02861 360 LKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTV 438 (660)
T ss_pred CCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecccccCCCCCCc
Confidence 00000 01 5799999999999999754 5455554579999999999754333222222346899
Q ss_pred cccCCCceEEEEC--CCC-CCCCCCCCcceeEEE-----ecccCCCchhhccccccccccccCcCC
Q 007715 528 STATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY 585 (592)
Q Consensus 528 G~p~~~~~v~IlD--~~g-~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~ 585 (592)
|+|++|++++|+| ++| ..++++. .|||+| +.||+++|+.|......+||.+||-|+
T Consensus 439 G~p~p~~ev~i~d~~~~g~~~~~~~~--~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~ 502 (660)
T PLN02861 439 GVPMTTIEARLESVPEMGYDALSDVP--RGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGE 502 (660)
T ss_pred cCccCceEEEEEEccccCcccCCCCC--ceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEE
Confidence 9999999999998 445 3445555 499998 889999999885554344444555443
|
|
| >PTZ00342 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=432.62 Aligned_cols=380 Identities=16% Similarity=0.153 Sum_probs=279.1
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHh---h-cCCC-----------CEEEEEcCCCHHHHHHH
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT---M-FSKG-----------DAIAIDMPMTVRAVIIY 250 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~---~-v~~g-----------d~V~i~~~~~~e~v~a~ 250 (592)
++++||++|+++... +..++.+||+||.++++++|++|.+ + +++| |+|+|+++|+++|++++
T Consensus 71 ~~~~p~~~Al~~~~~---g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~ 147 (746)
T PTZ00342 71 YKLNNNKIAIVEHSC---GEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVAD 147 (746)
T ss_pred HhhcCCceeEeccCC---CCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHH
Confidence 478999999986421 1235689999999999999999996 6 9998 99999999999999999
Q ss_pred HHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCC------
Q 007715 251 LAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG------ 322 (592)
Q Consensus 251 lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~------ 322 (592)
+||+++|++.||+++.++.+++.++|+++++++||++.+.. +.+..+...++. .++++........
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~ 221 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLV------EGLLERKNELPHLKKLIILDTLIKSKEININKE 221 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHH------HHHHHhhccCCCceEEEEECCCCcccccccccc
Confidence 99999999999999999999999999999999999976431 222222233332 2333322110000
Q ss_pred ----------CCC-c-------------------------------------------cCcccHHHhhccCCCCCCCCCC
Q 007715 323 ----------IPL-R-------------------------------------------EQDLSWKDFLSSVDYHPRPNYY 348 (592)
Q Consensus 323 ----------~~~-~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 348 (592)
... . .....|+++..... ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~ 296 (746)
T PTZ00342 222 EKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT-----TNY 296 (746)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc-----cCC
Confidence 000 0 00001222211110 011
Q ss_pred CCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhh--cCCCCCCEEEEecccchhchhHHHHHHHHcCCEEE
Q 007715 349 SPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLA 426 (592)
Q Consensus 349 ~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv 426 (592)
......++|+|+|+|||||||.|||||+||+|+++.+...... ......|++++++|++|+++....+.+++.|++++
T Consensus 297 ~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~ 376 (746)
T PTZ00342 297 KIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTIN 376 (746)
T ss_pred CCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEE
Confidence 2233467999999999999999999999999998777544322 12235689999999999999876778899999999
Q ss_pred EeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhc--------CcCCC-------------------------------
Q 007715 427 LYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NCLEG------------------------------- 467 (592)
Q Consensus 427 l~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~--------~~~~~------------------------------- 467 (592)
+.++ ++..+++.|+++++|++.++|.++..|.+. .....
T Consensus 377 ~~~~--~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~k 454 (746)
T PTZ00342 377 IWSK--DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSK 454 (746)
T ss_pred EeCC--CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 9864 678999999999999999999999988652 10000
Q ss_pred ---CCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccC-CCceEEEEC-CC
Q 007715 468 ---LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILD-EC 542 (592)
Q Consensus 468 ---~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~IlD-~~ 542 (592)
...++||.+++||+++++++.+++...++ ++++++||+||+++..+.... .....+++|+|+ |+++++|+| ++
T Consensus 455 ir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g-~~i~~gYGlTEt~~~~~~~~~-~~~~~gsvG~p~~pg~e~ki~d~~~ 532 (746)
T PTZ00342 455 IKDKVNPNLEVILNGGGKLSPKIAEELSVLLN-VNYYQGYGLTETTGPIFVQHA-DDNNTESIGGPISPNTKYKVRTWET 532 (746)
T ss_pred HHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC-CCEEEeeccCcccceeeeccC-CCCCcccccCcCCCcEEEEEecccc
Confidence 01268999999999999999999887664 789999999999764443322 334578999998 999999998 54
Q ss_pred CCCCCCCCCcceeEEE-----ecccCCCchhhcccccccccc-ccCcCC
Q 007715 543 GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF-RGMPMY 585 (592)
Q Consensus 543 g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f-~~~~~~ 585 (592)
+...+.+. .|||++ +.||+++|+.|.+....++|| +||-++
T Consensus 533 ~~~~~~~~--~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~ 579 (746)
T PTZ00342 533 YKATDTLP--KGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQ 579 (746)
T ss_pred cccCCCCC--ceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEE
Confidence 44444444 399998 789999999886655434455 454443
|
|
| >PLN02860 o-succinylbenzoate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-48 Score=425.37 Aligned_cols=374 Identities=17% Similarity=0.105 Sum_probs=283.5
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ ++||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++||+
T Consensus 17 ~~~~p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl~ 88 (563)
T PLN02860 17 ATLRGNAVVTISGNR--------RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPLN 88 (563)
T ss_pred HHhcCCceEEecCCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeCC
Confidence 478999999998665 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHh-hcCCCcE-EEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL-GAAPLKA-IVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+.++.+++.+++++++++++++++... .....+. ...+... .++.................++++......
T Consensus 89 ~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 161 (563)
T PLN02860 89 YRWSFEEAKSAMLLVRPVMLVTDETCS------SWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALG- 161 (563)
T ss_pred cccCHHHHHHHHHhcCceEEEEecccc------hHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccc-
Confidence 999999999999999999999987531 1111221 1122111 111111000000000001111111111000
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcC
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (592)
.........++++++|+|||||||+||||+++|++++.........++++++|+++...|++|+.++..++.+++.|
T Consensus 162 ---~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G 238 (563)
T PLN02860 162 ---TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVG 238 (563)
T ss_pred ---cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHHHHHHcC
Confidence 00011123568999999999999999999999999987666655677889999999999999999988888999999
Q ss_pred CEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC--CCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
+++++.+ .+++..+++.|+++++|++.++|+++..|.+.... ....+++||.+++||+++++++.+++.+.+++.++
T Consensus 239 ~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~ 317 (563)
T PLN02860 239 ACHVLLP-KFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKL 317 (563)
T ss_pred ceEEecC-CCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCce
Confidence 9999986 57889999999999999999999999999875422 22457899999999999999999999988877899
Q ss_pred eccccchhcccccccCCcCC----------------------CCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE
Q 007715 501 IESCGGTELSSAYIQGSLLQ----------------------PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~----------------------~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v 558 (592)
+|.||+||+++.++...... .....++|+|++|++++|+|++ +|+ +|||+|
T Consensus 318 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~-----~g~--~Gel~v 390 (563)
T PLN02860 318 FSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE-----SSR--VGRILT 390 (563)
T ss_pred ecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC-----CCc--eeEEEE
Confidence 99999999875433221111 0112479999999999999976 577 499998
Q ss_pred -----ecccCCCchhhcccccccccc-ccCcCC
Q 007715 559 -----FPLYLGASDRLLNADHEEVYF-RGMPMY 585 (592)
Q Consensus 559 -----~~gY~~~~~~~~~~~~~~~~f-~~~~~~ 585 (592)
+.||+++|+.+.+....+.|| +||-++
T Consensus 391 ~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~ 423 (563)
T PLN02860 391 RGPHVMLGYWGQNSETASVLSNDGWLDTGDIGW 423 (563)
T ss_pred ecCcccccccCCccccchhccCCCeEEccceEE
Confidence 789999999875544434455 444333
|
|
| >PRK06060 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-48 Score=435.74 Aligned_cols=349 Identities=15% Similarity=0.140 Sum_probs=279.9
Q ss_pred CCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC
Q 007715 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (592)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~ 266 (592)
.+||++|+++. . .+||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+||.
T Consensus 18 ~~pd~~a~~~~-~--------~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~ 88 (705)
T PRK06060 18 GWYDRPAFYAA-D--------VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPE 88 (705)
T ss_pred cCCCceEEEec-C--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCC
Confidence 48999999863 3 799999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCC
Q 007715 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (592)
Q Consensus 267 ~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (592)
++.+++.+++++++++++|+++.... .+.. . .+ ....++...... ..
T Consensus 89 ~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~----~-~~----------------~~~~~~~~~~~~---~~ 135 (705)
T PRK06060 89 LHRDDHALAARNTEPALVVTSDALRD---------RFQP----S-RV----------------AEAAELMSEAAR---VA 135 (705)
T ss_pred CCHHHHHHHHhcCCCcEEEEchHHhh---------hhcc----c-cc----------------chhhhhhhhccc---cC
Confidence 99999999999999999999875321 0000 0 00 001111111000 00
Q ss_pred CCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhh-hhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCE
Q 007715 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW-AHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (592)
Q Consensus 347 ~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (592)
........++++|||+|||||||+||||+++|+++.+.+.+.. ..++++++|++++..++.|+.++ ..++.+|..|++
T Consensus 136 ~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~ 215 (705)
T PRK06060 136 PGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGS 215 (705)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCE
Confidence 0011234568999999999999999999999999987776553 45778899999999999998887 568899999999
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 425 lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
+++.+...++..+..+++++++|+++++|+++..+++... ..++++||.+++|||++++++.+++.+.+++++++|.|
T Consensus 216 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~Y 293 (705)
T PRK06060 216 AVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGI 293 (705)
T ss_pred EEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeee
Confidence 9998766677888999999999999999999999987542 23578999999999999999999998888778999999
Q ss_pred cchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccccc
Q 007715 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (592)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f 579 (592)
|+||++..+.... ......+++|+|++|++++|+|++|+++|+|+. |||+| ++||+|+|+.+.. ...||-
T Consensus 294 G~tE~~~~~~~~~-~~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~--GEl~i~g~~v~~GY~~~~~~~~~--~~~~~~ 368 (705)
T PRK06060 294 GSTEVGQTFVSNR-VDEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVE--GDLWVRGPAIAKGYWNRPDSPVA--NEGWLD 368 (705)
T ss_pred eccccCceEEecc-CCCCCcCcccccCCCcEEEEECCCCCCCCCCCc--eEEEEccchhhhhhhCCCccccc--CCCcEE
Confidence 9999975433222 223346789999999999999999999999995 99999 6899999997532 233444
Q ss_pred ccCcCC
Q 007715 580 RGMPMY 585 (592)
Q Consensus 580 ~~~~~~ 585 (592)
++|-++
T Consensus 369 TGDl~~ 374 (705)
T PRK06060 369 TRDRVC 374 (705)
T ss_pred CCeeEE
Confidence 555443
|
|
| >PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=419.35 Aligned_cols=378 Identities=19% Similarity=0.187 Sum_probs=293.4
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+||++|+++.+. ..+.++.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 35 ~~~p~~~A~~~~~~--~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 35 ASCPDKTAVTAVRL--GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred HHCCCceEEEecCC--CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEecccc
Confidence 67999999998652 122345999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCC-
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH- 342 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (592)
.++.+++.+++++++++++++++.+.. .+..+....+....+. .++++... +..++.++.......
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 181 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKTFRG-FDHAAMARRLRPELPALRHVVVVGGD----------GADSFEALLITPAWEQ 181 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEeccccC-cchHHHHHHHhhhCCCcceEEEecCC----------CccCHHHHhhCCcccc
Confidence 999999999999999999999876421 0001111222222222 22222211 112344443221100
Q ss_pred --CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHH
Q 007715 343 --PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (592)
Q Consensus 343 --~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (592)
............++++|+|+|||||||.||||+++|++++..+......+++++++++++..|++|..+. +.++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l 261 (547)
T PRK13295 182 EPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGFMYGLMMPV 261 (547)
T ss_pred ccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHH
Confidence 0000111223456899999999999999999999999998888777777889999999999999998876 6688999
Q ss_pred HcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCc
Q 007715 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (592)
Q Consensus 420 ~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (592)
..|+++++.+ ..++..+++.++++++|++.++|+++..|.........++++||.+++||+++++++.+++.+.+ +++
T Consensus 262 ~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~ 339 (547)
T PRK13295 262 MLGATAVLQD-IWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL-GAK 339 (547)
T ss_pred HcCCeEEeCC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-CCC
Confidence 9999999876 56789999999999999999999999999876555556788999999999999999999988877 589
Q ss_pred eeccccchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccc
Q 007715 500 IIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNAD 573 (592)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~ 573 (592)
++|.||+||++.+.+..... ......++|+|++|++++|+|++++++|.|+. |||+| +.||+++|+.+...
T Consensus 340 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g~~~~~gY~~~~~~t~~~- 416 (547)
T PRK13295 340 IVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAGQI--GRLQVRGCSNFGGYLKRPQLNGTD- 416 (547)
T ss_pred eEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCCCC--CeEEEEcCcccccccCCccccccC-
Confidence 99999999997643322211 12234689999999999999999999999995 99999 78999999977443
Q ss_pred ccccccccC
Q 007715 574 HEEVYFRGM 582 (592)
Q Consensus 574 ~~~~~f~~~ 582 (592)
..+||-++|
T Consensus 417 ~~g~~~TGD 425 (547)
T PRK13295 417 ADGWFDTGD 425 (547)
T ss_pred CCCCeecce
Confidence 333343444
|
|
| >PRK07529 AMP-binding domain protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-47 Score=424.35 Aligned_cols=395 Identities=20% Similarity=0.156 Sum_probs=292.2
Q ss_pred hhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHh
Q 007715 178 CCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILA 256 (592)
Q Consensus 178 ~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~ 256 (592)
..+.+.+ +++||++|+++...+......+++||+||.++++++|++|+++ +++||+|+++++|++++++++|||+++
T Consensus 29 ~~l~~~a--~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~ 106 (632)
T PRK07529 29 ELLSRAA--ARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAA 106 (632)
T ss_pred HHHHHHH--HHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 3444443 7899999999753221122345999999999999999999999 999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCc--EEEEcCCCCCC-CCC---------
Q 007715 257 GYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDV-GIP--------- 324 (592)
Q Consensus 257 Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~-~~~--------- 324 (592)
| +++||++.++.+++.+++++++++++|+++.+... ...+.........+.. ++.+....... ...
T Consensus 107 G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 184 (632)
T PRK07529 107 G-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGT-DIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRRK 184 (632)
T ss_pred C-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCc-hHHHHHHHHHhcCCcceeEEEecCcccccccccccccccccc
Confidence 9 57999999999999999999999999998764210 0111111222222222 22222111000 000
Q ss_pred CccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEec
Q 007715 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPT 404 (592)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~ 404 (592)
...+...|.+.+..... ..........++++|+++|||||||.||||+++|+++++........+++.++|++++..
T Consensus 185 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~ 261 (632)
T PRK07529 185 AHARILDFDAELARQPG---DRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCGL 261 (632)
T ss_pred cccccCCHHHHHhcCCC---ccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 01123345555443321 111112234578999999999999999999999999988777666677889999999999
Q ss_pred ccchhchh-HHHHHHHHcCCEEEEeCCC-C-C---hhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEE
Q 007715 405 NLGWVMGP-VILFSSFLNGATLALYQGS-P-L---ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (592)
Q Consensus 405 ~~~~~~~~-~~~~~~L~~G~~lvl~~~~-~-~---~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~ 478 (592)
|++|..+. ..++.+|..|+++++.+.. . + ...++++|+++++|++.++|+++..|++... ...++++||.+++
T Consensus 262 pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~slr~v~~ 340 (632)
T PRK07529 262 PLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSLRYALC 340 (632)
T ss_pred CchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccceEEEEE
Confidence 99998876 4688999999999997531 1 2 2578899999999999999999999987653 2346899999999
Q ss_pred ecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEE--CCCC---CCCCCCCCcc
Q 007715 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL--DECG---VPYPDDQPCV 553 (592)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~Il--D~~g---~~vp~G~~gi 553 (592)
||+++++++.+++.+.+ +++++|.||+||++..+.........+.+++|+|+|+++++|+ |++| +++|+|+ +
T Consensus 341 gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~--~ 417 (632)
T PRK07529 341 GAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDE--V 417 (632)
T ss_pred cCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCC--c
Confidence 99999999999988776 4899999999999865443332333467899999999999884 7777 8999999 4
Q ss_pred eeEEE-----ecccCCCchhhcccccccccc-ccCcC
Q 007715 554 GEVGL-----FPLYLGASDRLLNADHEEVYF-RGMPM 584 (592)
Q Consensus 554 Gel~v-----~~gY~~~~~~~~~~~~~~~~f-~~~~~ 584 (592)
|||+| +.||++++... .....+.|| +||-+
T Consensus 418 Gel~v~gp~v~~GY~~~~~~~-~~~~~~gw~~TGDlg 453 (632)
T PRK07529 418 GVLCIAGPNVFSGYLEAAHNK-GLWLEDGWLNTGDLG 453 (632)
T ss_pred eEEEEECCCccccccCCcccc-ccccCCCceEcCcEE
Confidence 99998 78999876532 333234455 44433
|
|
| >PRK13382 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-47 Score=414.08 Aligned_cols=364 Identities=15% Similarity=0.094 Sum_probs=285.2
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+++++||++|+++.++ .+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 52 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl 123 (537)
T PRK13382 52 AAQRCPDRPGLIDELG--------TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILLL 123 (537)
T ss_pred HHHhCCCCeEEEeCCC--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEec
Confidence 3489999999998765 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
++.++.+++.+++++++++++|++..+. ..........+....++..... .....++++......
T Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-- 188 (537)
T PRK13382 124 NTSFAGPALAEVVTREGVDTVIYDEEFS------ATVDRALADCPQATRIVAWTDE-------DHDLTVEVLIAAHAG-- 188 (537)
T ss_pred CcccCHHHHHHHHHhcCCCEEEEchhhH------HHHHHHHhhccccceEEEecCC-------cccccHHHHhhccCc--
Confidence 9999999999999999999999987532 1112211111111111111000 012234444432211
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCC
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (592)
. .....+++.++++|||||||+||||+++|++++.........+.+..+++++...|++|..++..++.++..|+
T Consensus 189 ---~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~ 263 (537)
T PRK13382 189 ---Q--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLAC 263 (537)
T ss_pred ---C--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCc
Confidence 0 11123578999999999999999999999998877777667778889999999999999999878889999999
Q ss_pred EEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 424 ~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
++++.. .+++..+++.|+++++|++..+|++++.|.+... ....+++++|.+++|||+++++++..+.+.++ .+++
T Consensus 264 ~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~ 341 (537)
T PRK13382 264 TIVTRR-RFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG-DVIY 341 (537)
T ss_pred EEEECC-CcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC-CcEE
Confidence 998865 6788999999999999999999999999987542 12345678999999999999999999888876 6799
Q ss_pred ccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccc
Q 007715 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEE 576 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~ 576 (592)
|.||+||++..++..........+++|+|++|++++|+|++++++|.|+. |||++ +.||+ ++.+. ....+
T Consensus 342 ~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~~~~gY~--~~~~~-~~~~g 416 (537)
T PRK13382 342 NNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGEV--GTIFVRNDTQFDGYT--SGSTK-DFHDG 416 (537)
T ss_pred ecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCCe--eEEEEEcCCcccCcc--ccchh-hccCC
Confidence 99999999864433222223346799999999999999999999999984 99998 68997 44432 22233
Q ss_pred cccccCc
Q 007715 577 VYFRGMP 583 (592)
Q Consensus 577 ~~f~~~~ 583 (592)
||.++|-
T Consensus 417 ~~~TGDl 423 (537)
T PRK13382 417 FMASGDV 423 (537)
T ss_pred CEeeCce
Confidence 4444443
|
|
| >PLN02246 4-coumarate--CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=412.15 Aligned_cols=370 Identities=21% Similarity=0.234 Sum_probs=291.0
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+++||++|+++.+.+ +++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+||
T Consensus 34 ~~~~~~~a~~~~~~~------~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 34 SEFSDRPCLIDGATG------RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANP 107 (537)
T ss_pred HhCCCCeEEEecCCC------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCC
Confidence 578999999875321 3899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (592)
.++.+++..++++++++++|+++... +.+..+........+.+.... .....+.++......
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~---- 169 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYV------DKLKGLAEDDGVTVVTIDDPP--------EGCLHFSELTQADEN---- 169 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchH------HHHHHHhhcCCceEEEeCCCC--------CCceeHHHHhcCCCC----
Confidence 99999999999999999999987532 111222111111222222110 122334444332211
Q ss_pred CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhh----hcCCCCCCEEEEecccchhchh-HHHHHHHH
Q 007715 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (592)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (592)
..+.....+++++|++|||||||.||||+++|++++..+.+... .+.+.++|+++...|++|+.++ ..++.++.
T Consensus 170 -~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~ 248 (537)
T PLN02246 170 -ELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLR 248 (537)
T ss_pred -CCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHh
Confidence 11223346789999999999999999999999999876654332 4678899999999999999887 44778899
Q ss_pred cCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 421 ~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
.|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++.+.++++++
T Consensus 249 ~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~ 327 (537)
T PLN02246 249 VGAAILIMP-KFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVL 327 (537)
T ss_pred cCCEEEEeC-CCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeE
Confidence 999999987 4678899999999999999999999999987655445567899999999999999999999998887889
Q ss_pred eccccchhcccccccCCc----CCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhhc
Q 007715 501 IESCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLL 570 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~ 570 (592)
++.||+||++.+++.... .....++++|+|+++++++|+| ++++++|+|+. |||++ +.||+++|+.+.
T Consensus 328 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~~~GY~~~~~~~~ 405 (537)
T PLN02246 328 GQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQP--GEICIRGPQIMKGYLNDPEATA 405 (537)
T ss_pred eccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCc--eEEEEECCchhccccCCchhhh
Confidence 999999999754332211 1123457899999999999999 57999999995 99999 789999999875
Q ss_pred ccccccccc-ccCcC
Q 007715 571 NADHEEVYF-RGMPM 584 (592)
Q Consensus 571 ~~~~~~~~f-~~~~~ 584 (592)
.....+.|| ++|-+
T Consensus 406 ~~~~~~~~~~TGD~~ 420 (537)
T PLN02246 406 NTIDKDGWLHTGDIG 420 (537)
T ss_pred hcccCCCCeeecceE
Confidence 554334444 45433
|
|
| >PLN02574 4-coumarate--CoA ligase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-47 Score=414.95 Aligned_cols=369 Identities=17% Similarity=0.164 Sum_probs=285.2
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
+.+|+++|+++..++ .++||+||+++++++|++|++ . +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 50 ~~~~~~~a~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 50 HNHNGDTALIDSSTG------FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cccCCCCEEEECCCC------CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcC
Confidence 468999999975431 279999999999999999999 8 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
|.++.+++.++++++++++++++.+.. ..+.+ ....++.+...... . ........|+++......
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~--- 188 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENV---------EKLSP-LGVPVIGVPENYDF-D-SKRIEFPKFYELIKEDFD--- 188 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHH---------HHHHh-cCCcEEecCccccc-c-cCccCcccHHHHhhcCCc---
Confidence 999999999999999999999987531 11111 11122222111000 0 000122345554433221
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhh----hcC-CCCCCEEEEecccchhchh-HHHHHH
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HID-LKVGDVYCWPTNLGWVMGP-VILFSS 418 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~-~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (592)
........++++++|+|||||||.||||+++|+++...+..... .+. ....++++..+|++|..++ ..++.+
T Consensus 189 --~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 266 (560)
T PLN02574 189 --FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGL 266 (560)
T ss_pred --ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHH
Confidence 11122345689999999999999999999999998876654432 122 2356788999999999887 446677
Q ss_pred HHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC-CCCCCccccEEEEecCCCChhhHHHHHHhccC
Q 007715 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-EGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (592)
Q Consensus 419 L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~-~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~ 497 (592)
+..|+++++.+ .+++..+++.|+++++|++.++|+++..|.+.... ...++++||.+++||+++++++.+++.+.+++
T Consensus 267 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~ 345 (560)
T PLN02574 267 LSLGSTIVVMR-RFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPH 345 (560)
T ss_pred HhcCCEEEEec-CCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCC
Confidence 88999999886 57889999999999999999999999999876532 34568899999999999999999998888877
Q ss_pred CceeccccchhcccccccCCc-CCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhhc
Q 007715 498 NAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLL 570 (592)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~ 570 (592)
+++++.||+||++...+.... ......+++|+|++|++++|+| ++|+++|+|+. |||+| +.||+++|+.+.
T Consensus 346 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~--Gei~v~g~~~~~GY~~~~~~t~ 423 (560)
T PLN02574 346 VDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNC--GELWIQGPGVMKGYLNNPKATQ 423 (560)
T ss_pred CcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCC--eEEEEECcchhhhhcCChhHhh
Confidence 899999999999754332222 2224567999999999999999 78999999995 99999 789999999886
Q ss_pred ccccccccccc
Q 007715 571 NADHEEVYFRG 581 (592)
Q Consensus 571 ~~~~~~~~f~~ 581 (592)
.....+.||.+
T Consensus 424 ~~~~~~g~~~T 434 (560)
T PLN02574 424 STIDKDGWLRT 434 (560)
T ss_pred hhccCCCCccc
Confidence 55444556543
|
|
| >COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=406.57 Aligned_cols=367 Identities=21% Similarity=0.204 Sum_probs=277.2
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+++.+|+.+|+.+... +.++.+||+|+.+++.++|++|++. +..||+|+|++.|+++|+++.+||+.+|++.||+
T Consensus 25 ~~~~~~~~~a~~~~~~----~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~ 100 (613)
T COG1022 25 RVKDRPDGVALMYKEL----GGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPI 100 (613)
T ss_pred HhhcCCcceeEeeecC----CcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEec
Confidence 3478888889887654 6788999999999999999999999 9779999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCc---EEEEcCCCCCCCCCCccCcccHHHhhccCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK---AIVLPAIGNDVGIPLREQDLSWKDFLSSVD 340 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (592)
.++.++++++++|+++++++||++... ..+....+...++.. ...+...... .......++.......
T Consensus 101 y~t~~~~~~~~iL~~se~~~i~~e~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 171 (613)
T COG1022 101 YSTSTPEQLAYILNESESKVIFVENQE-----LLDLVLPVLEDCPKVVDLIVIIDLVREA----VEAKALVLEVFPDEGI 171 (613)
T ss_pred CCCCCHHHHHHHHhcCCceEEEecchH-----HHHHHHhhhccccchhhhhhhhhhhhhc----cchhhccccccccccc
Confidence 999999999999999999999999842 122222232222210 0000000000 0000000111000000
Q ss_pred ----CCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC-CCCCCEEEEecccchhchhHH-
Q 007715 341 ----YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGPVI- 414 (592)
Q Consensus 341 ----~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~- 414 (592)
...........+..+||+|.|+|||||||+|||||++|+|++..+......+. ++++|++++++|++|++....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~ 251 (613)
T COG1022 172 SLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFE 251 (613)
T ss_pred hhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHH
Confidence 00000111123556899999999999999999999999999999999988886 999999999999999998853
Q ss_pred HHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhc--------Cc----------------------
Q 007715 415 LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NC---------------------- 464 (592)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~--------~~---------------------- 464 (592)
....+..|+++.. ..++..+.+.+.+.++|++..+|.+|..+-+. ..
T Consensus 252 ~~~~~~~g~~~~~---~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~ 328 (613)
T COG1022 252 GGLALYGGVTVLF---KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALL 328 (613)
T ss_pred HHHHhhcceEEEe---cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhc
Confidence 4444444444444 34678999999999999999999999877432 00
Q ss_pred -------------------CCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccC
Q 007715 465 -------------------LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFG 525 (592)
Q Consensus 465 -------------------~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 525 (592)
..... .++|++++||+++++++..+++.. ++++.++||+|||+..++.. +......+
T Consensus 329 ~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~-~~~~~~~g 404 (613)
T COG1022 329 GGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVN-PPDRFVLG 404 (613)
T ss_pred ccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEc-cccCcccC
Confidence 00011 379999999999999999988876 58999999999998765443 34456678
Q ss_pred cccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccccccccCc
Q 007715 526 AFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMP 583 (592)
Q Consensus 526 ~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~ 583 (592)
++|+|+|+++++|.|+ |||.| ++||+++|+.|.+....++||++.+
T Consensus 405 tvG~p~p~~evKI~d~------------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGD 455 (613)
T COG1022 405 TVGKPLPGIEVKIADD------------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGD 455 (613)
T ss_pred CcCCcCCCceEEEccC------------ceEEEecchhcchhcCChHHHhhhccccCCcccCc
Confidence 9999999999999993 89988 8999999999988888788887544
|
|
| >PTZ00216 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-47 Score=428.63 Aligned_cols=382 Identities=18% Similarity=0.179 Sum_probs=274.0
Q ss_pred cCCCCCCceEEEEecc-----------CCC--------CCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 007715 185 HRRKEDNTVAIVWRED-----------RCD--------ESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~-----------~~~--------~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~ 244 (592)
+++++||++|+.+... .+. .++++.+||+||.++++++|++|+++ +++||+|+|+++|++
T Consensus 78 ~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~ 157 (700)
T PTZ00216 78 ICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW 157 (700)
T ss_pred HHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH
Confidence 3489999999998521 000 12457999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhc--CCC-cEEEEcCCCCCC
Q 007715 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--APL-KAIVLPAIGNDV 321 (592)
Q Consensus 245 e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~i~~~~~~~ 321 (592)
++++++|||+++|+++||+++.++.+++.+++++++++++|++.... ......... .+. .++++.......
T Consensus 158 e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~~~~~ii~~~~~~~~~ 231 (700)
T PTZ00216 158 EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV------PNLLRLMKSGGMPNTTIIYLDSLPASV 231 (700)
T ss_pred HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH------HHHHHhhhhccCCceEEEEECCCcccc
Confidence 99999999999999999999999999999999999999999986421 111111111 111 233332111100
Q ss_pred CCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhc-----CCCC
Q 007715 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-----DLKV 396 (592)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~ 396 (592)
........+|+++...+... ...........++|+|||+|||||||.||||+++|+++++.+.+....+ .+++
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 309 (700)
T PTZ00216 232 -DTEGCRLVAWTDVVAKGHSA-GSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEE 309 (700)
T ss_pred -ccCCceEEEHHHHHHhCCcc-ccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCC
Confidence 00011234677776544210 0011112334679999999999999999999999999988776554332 2468
Q ss_pred CCEEEEecccchhchhHHHHHHHHcCCEEEEeCCCCChhhHHH-------HHHHhCCcEEEccHHHHHHHHhcCcC----
Q 007715 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK-------FVQDAGVTVLGTVPSLVKAWRNTNCL---- 465 (592)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~-------~i~~~~vt~l~~~Ps~l~~l~~~~~~---- 465 (592)
+|+++++.|++|.++.......+..|+++++. ++..+.+ .|+++++|++.++|++++.+.+....
T Consensus 310 ~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~----~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~ 385 (700)
T PTZ00216 310 DETYCSYLPLAHIMEFGVTNIFLARGALIGFG----SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPP 385 (700)
T ss_pred CCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC----CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhc
Confidence 89999999999988765445557788877663 2334433 68999999999999999887642100
Q ss_pred ---------------------CCC----------------CCccccEEEEecCCCChhhHHHHHHhccCCceeccccchh
Q 007715 466 ---------------------EGL----------------DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (592)
Q Consensus 466 ---------------------~~~----------------~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (592)
... ..+++|.+++||+++++++.++++..++ +++|+||+||
T Consensus 386 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~--~l~~~YG~TE 463 (700)
T PTZ00216 386 VGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG--MVIQGWGLTE 463 (700)
T ss_pred cCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh--hHhhccCccc
Confidence 000 0157999999999999999887766543 8999999999
Q ss_pred cccccccCCcCCCCccCcccccCCCceEEEECCCC--CCCCCCCCcceeEEE-----ecccCCCchhhccccccccccc-
Q 007715 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECG--VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFR- 580 (592)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g--~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~- 580 (592)
+++..+... ......+++|+|++|++++|+|+++ ...+++. .|||+| ++||+++|+.|......++||.
T Consensus 464 t~~~~~~~~-~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~--~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~T 540 (700)
T PTZ00216 464 TVCCGGIQR-TGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEP--RGEILLRGPFLFKGYYKQEELTREVLDEDGWFHT 540 (700)
T ss_pred ccccccccC-CCCCCCCCcCCcCCCeEEEEeechhhccCCCCCC--CceEEEcCCcccchhcCChhHhhhhccccCCeec
Confidence 976443322 2334568999999999999999764 3345555 499998 8999999998855544444554
Q ss_pred cCc
Q 007715 581 GMP 583 (592)
Q Consensus 581 ~~~ 583 (592)
||-
T Consensus 541 GDi 543 (700)
T PTZ00216 541 GDV 543 (700)
T ss_pred cce
Confidence 443
|
|
| >PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-48 Score=409.85 Aligned_cols=369 Identities=25% Similarity=0.247 Sum_probs=278.9
Q ss_pred cCCCCCCceEEEE-eccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 007715 185 HRRKEDNTVAIVW-REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (592)
Q Consensus 185 ~a~~~pd~~Al~~-~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vp 262 (592)
+|+++||++|+++ .+. .+||+||+++++++|..|++. +++||+|+|+++|++++++++|||+++|++++|
T Consensus 4 ~a~~~pd~~a~~~~~~~--------~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~ 75 (417)
T PF00501_consen 4 QAQRYPDRIALIDDEGR--------SLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVP 75 (417)
T ss_dssp HHHHSTTSEEEEETTTE--------EEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEE
T ss_pred HHhhCCCceEEEECCCE--------EEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccc
Confidence 4588999999999 554 999999999999999999998 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhh---cC--CCcEEEEcCCCCCCCCCCccCcccHHHhhc
Q 007715 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AA--PLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (592)
Q Consensus 263 ld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (592)
++|.++.+++.++++.+++++||+ .+. .+... ...+.. .. ......+..... ...+.+..
T Consensus 76 l~~~~~~~~~~~~l~~~~~~~ii~-~~~---~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 140 (417)
T PF00501_consen 76 LDPSLSEDELRHILRQSGPKVIIT-SEA---VDSEP-LKKLKSIFKQEDPSSSIIILDRDDL----------PKKEALKS 140 (417)
T ss_dssp EETTSSHHHHHHHHHHHTESEEEE-CHH---HSCHH-HHHHHHHHTTSTTTEEEEEESHSSC----------TTCHHHHH
T ss_pred cccccccccccccccccceeEEEE-ecc---ccccc-cccchhhhccccccccccccccccc----------cccccccc
Confidence 999999999999999999999997 100 00111 222221 11 112333322111 00011110
Q ss_pred cCCCCCCCCCCCCCC-CCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhh--hhcCCCCCCEEEEecccchhchh-H
Q 007715 338 SVDYHPRPNYYSPVY-NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW--AHIDLKVGDVYCWPTNLGWVMGP-V 413 (592)
Q Consensus 338 ~~~~~~~~~~~~~~~-~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~-~ 413 (592)
.... .. ...+ ..++++++++|||||||.||+|+++|+++++.+.... ..++++ |++++..|++|..++ .
T Consensus 141 ~~~~----~~-~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~ 213 (417)
T PF00501_consen 141 ASLS----DE-PQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLIS 213 (417)
T ss_dssp HHHC----HC-SHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHH
T ss_pred cccc----cc-cccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccc
Confidence 0000 00 0000 0468999999999999999999999999988876653 223333 699999999999999 8
Q ss_pred HHHHHHHcCCEEEEeCCCC--ChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC----CCCCCccccEEEEecCCCChhh
Q 007715 414 ILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL----EGLDWTKIRSFASTGETSNVDD 487 (592)
Q Consensus 414 ~~~~~L~~G~~lvl~~~~~--~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~----~~~~l~sLr~v~~gGe~l~~~~ 487 (592)
.++.++..|+++++++... ++..+++.|+++++|++.++|+++..|++.... ...++++||.+++||+++++++
T Consensus 214 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~ 293 (417)
T PF00501_consen 214 ALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDL 293 (417)
T ss_dssp HHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHH
T ss_pred cccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhh
Confidence 8999999999999998532 246789999999999999999999999874322 1346889999999999999999
Q ss_pred HHHHHHhccCCceeccccchhcccccccCC-cCCCCccCcccccCCCceEEEECCC-CCCCCCCCCcceeEEE-----ec
Q 007715 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGS-LLQPQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGL-----FP 560 (592)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~-~~~~~~~~~iG~p~~~~~v~IlD~~-g~~vp~G~~giGel~v-----~~ 560 (592)
.+++++.++..++++.||+||++..++... .......+++|+|++|++++|+|++ ++++|+|+. |||+| +.
T Consensus 294 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~--Gei~i~~~~~~~ 371 (417)
T PF00501_consen 294 LRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEP--GEIVIRGPNVFS 371 (417)
T ss_dssp HHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSE--EEEEEESTTSBS
T ss_pred ccccccccccccceecccccccceeeeccccccccccccccccccccccccccccccccccccccc--ccccccCCccce
Confidence 999998887558999999999987654332 1222356789999999999999987 999999995 99999 79
Q ss_pred ccCCCchhhcccccc-ccccccCcCC
Q 007715 561 LYLGASDRLLNADHE-EVYFRGMPMY 585 (592)
Q Consensus 561 gY~~~~~~~~~~~~~-~~~f~~~~~~ 585 (592)
||+++|+.+...... +||.++|-++
T Consensus 372 gy~~~~~~~~~~~~~~~~~~TGD~g~ 397 (417)
T PF00501_consen 372 GYYNDPELTAEAFIDDGWYRTGDLGR 397 (417)
T ss_dssp EETTBHHHHHHHEETTSEEEEEEEEE
T ss_pred eeeccccccccccccccceecceEEE
Confidence 999998876444333 3444454443
|
This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A .... |
| >PRK07656 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-46 Score=407.46 Aligned_cols=372 Identities=24% Similarity=0.262 Sum_probs=297.9
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+|+++|+++.+. ++||+||.+++.++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 15 ~~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~ 86 (513)
T PRK07656 15 ARRFGDKEAYVFGDQ--------RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLN 86 (513)
T ss_pred HHHCCCCeEEEeCCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecC
Confidence 378999999999776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-c-EEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-K-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+.++.+++..++++++++++++++... ..........+. . ++++...... ........|+++......
T Consensus 87 ~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~- 156 (513)
T PRK07656 87 TRYTADEAAYILARGDAKALFVLGLFL------GVDYSATTRLPALEHVVICETEEDD---PHTEKMKTFTDFLAAGDP- 156 (513)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhH------HHHHHHHhccCCccEEEEEcCcccc---cCccccccHHHHHhcCCC-
Confidence 999999999999999999999987532 111222222222 1 2222211111 001122456666543221
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHc
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLN 421 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~ 421 (592)
........++++++|+|||||||.||||.++|+++...+......++++++|++++..|+.|+.++ +.++.++..
T Consensus 157 ----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (513)
T PRK07656 157 ----AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMR 232 (513)
T ss_pred ----CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHc
Confidence 112234567899999999999999999999999998888777778889999999999999999887 457889999
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++.+.++..+++
T Consensus 233 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~ 311 (513)
T PRK07656 233 GATILPLP-VFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVL 311 (513)
T ss_pred CceEEecC-cCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceE
Confidence 99998865 56789999999999999999999999999987655555788999999999999999999998887633899
Q ss_pred ccccchhcccccccCCcCCCC--ccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccc
Q 007715 502 ESCGGTELSSAYIQGSLLQPQ--AFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADH 574 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~--~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~ 574 (592)
|.||+||+++....+...... ...++|+|++|++++|+|+++++++.|+. |||++ +.||++++..+.....
T Consensus 312 ~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~~~~~~~~~ 389 (513)
T PRK07656 312 TGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEV--GELLVRGPNVMKGYYDDPEATAAAID 389 (513)
T ss_pred eEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCc--eEEEEEcchhhhhhcCCHHHHhhhhc
Confidence 999999997654443332222 25789999999999999999999999995 99999 7899999887644443
Q ss_pred ccccc-ccC
Q 007715 575 EEVYF-RGM 582 (592)
Q Consensus 575 ~~~~f-~~~ 582 (592)
.+.|| +||
T Consensus 390 ~~~~~~tGD 398 (513)
T PRK07656 390 ADGWLHTGD 398 (513)
T ss_pred cCCceeccc
Confidence 23444 444
|
|
| >PRK05677 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=410.84 Aligned_cols=373 Identities=18% Similarity=0.175 Sum_probs=283.4
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++.+|+++|+++.++ .+||+||+++++++|++|.+ . +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 34 a~~~p~~~al~~~~~--------~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l 105 (562)
T PRK05677 34 CQRFADKPAFSNLGK--------TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNT 105 (562)
T ss_pred HHhCCCCeeEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeec
Confidence 367999999998765 89999999999999999997 6 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCC-------------------CC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG-------------------IP 324 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------------~~ 324 (592)
+|.++.+++.+++++++++++|+++... .....+........+++........ ..
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK05677 106 NPLYTAREMEHQFNDSGAKALVCLANMA------HLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAY 179 (562)
T ss_pred CCCCCHHHHHHHHhccCceEEEEecchh------hhHHHhhhccCcceeEEecccccccchhhhhcccchhhcccccccc
Confidence 9999999999999999999999986532 1112222211112222211000000 00
Q ss_pred CccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC--CCC-CCEEE
Q 007715 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKV-GDVYC 401 (592)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~-~d~~l 401 (592)
..+....+.+.+..... .........++++++|+|||||||+||||+++|+++...+......+. +.. .++++
T Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 180 HLPQAVKFNDALAKGAG----QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred CCcccccHHHHHhcCCC----CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 00112233443332221 111122345789999999999999999999999998776655444332 333 36788
Q ss_pred Eecccchhchh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEec
Q 007715 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (592)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gG 480 (592)
+..|+.|..+. +.++.++..|++.++.+...++..+++.|+++++|++..+|+++..|.+.......+++++|.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 89999998887 45777888999888877556888999999999999999999999999876544445578999999999
Q ss_pred CCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE--
Q 007715 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-- 558 (592)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-- 558 (592)
+++++++.+++.+.+ ++++++.||+||++.++... ......++++|+|+++++++|+|++++++|.|+. |||+|
T Consensus 336 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~-~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g 411 (562)
T PRK05677 336 MALQLATAERWKEVT-GCAICEGYGMTETSPVVSVN-PSQAIQVGTIGIPVPSTLCKVIDDDGNELPLGEV--GELCVKG 411 (562)
T ss_pred ccCCHHHHHHHHHHc-CCCeeccCCccccCcceeec-CccCCCCCccCccCCCCEEEEECCCCCCCCCCCC--eEEEEec
Confidence 999999998888765 48899999999987644332 2223345789999999999999999999999995 99999
Q ss_pred ---ecccCCCchhhccccccccccc
Q 007715 559 ---FPLYLGASDRLLNADHEEVYFR 580 (592)
Q Consensus 559 ---~~gY~~~~~~~~~~~~~~~~f~ 580 (592)
++||+++|+.+......+.||.
T Consensus 412 ~~~~~gY~~~~~~t~~~~~~~g~~~ 436 (562)
T PRK05677 412 PQVMKGYWQRPEATDEILDSDGWLK 436 (562)
T ss_pred CccchhhcCCchhhhhccCCCCccc
Confidence 7899999998754433344554
|
|
| >PRK07638 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=406.26 Aligned_cols=355 Identities=21% Similarity=0.218 Sum_probs=283.5
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
++++||++|+++.+. ++||+||.++++++|++|.+...+|++|+|+++|++++++++|||+++|++++|+++
T Consensus 11 a~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 82 (487)
T PRK07638 11 ASLQPNKIAIKENDR--------VLTYKDWFESVCKVANWLNEKESKNKTIAILLENRIEFLQLFAGAAMAGWTCVPLDI 82 (487)
T ss_pred HHhCCCCeEEecCCc--------EeeHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCc
Confidence 478999999998776 999999999999999999988338999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (592)
.++.+++.+++++++++++++++..... +. . ....++.+. .+.+.......
T Consensus 83 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~------~~---~-~~~~~~~~~---------------~~~~~~~~~~~---- 133 (487)
T PRK07638 83 KWKQDELKERLAISNADMIVTERYKLND------LP---D-EEGRVIEID---------------EWKRMIEKYLP---- 133 (487)
T ss_pred cCCHHHHHHHHHhCCCCEEEEecccccc------hh---h-ccceEEEeh---------------hhhhhhhhccc----
Confidence 9999999999999999999998753211 00 0 001111111 11111111110
Q ss_pred CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEE
Q 007715 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (592)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~l 425 (592)
.........+++++|+|||||||.||||+++|++++..+......++++++|+++...++.|+.++..++.++..|+++
T Consensus 134 -~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~ 212 (487)
T PRK07638 134 -TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTV 212 (487)
T ss_pred -cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEE
Confidence 0111122346789999999999999999999999988877777778899999999999999998888888999999999
Q ss_pred EEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecccc
Q 007715 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (592)
Q Consensus 426 vl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (592)
++.+ .+++..+++.|+++++|++.++|+++..|.+... . ..+.+.++++|++++.++..++...+++++++|.||
T Consensus 213 ~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG 287 (487)
T PRK07638 213 HLMR-KFIPNQVLDKLETENISVMYTVPTMLESLYKENR---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYG 287 (487)
T ss_pred EEcC-CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEec
Confidence 9886 5788999999999999999999999999987632 1 345566788999999999999999888889999999
Q ss_pred chhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccccccc
Q 007715 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFR 580 (592)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~ 580 (592)
+||++..+............++|+|++|++++|+|++|+++|+|+. |||+| +.||+++++.+......+||.+
T Consensus 288 ~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~--Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~T 365 (487)
T PRK07638 288 ASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGEI--GTVYVKSPQFFMGYIIGGVLARELNADGWMTV 365 (487)
T ss_pred CCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCCC--eEEEEecccceeeecCCHHHHhhhccCCcEec
Confidence 9999865443332233456799999999999999999999999995 99999 7899999986633333344445
Q ss_pred cCcCC
Q 007715 581 GMPMY 585 (592)
Q Consensus 581 ~~~~~ 585 (592)
||-++
T Consensus 366 GDl~~ 370 (487)
T PRK07638 366 RDVGY 370 (487)
T ss_pred CccEe
Confidence 55443
|
|
| >PRK08180 feruloyl-CoA synthase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=417.41 Aligned_cols=372 Identities=16% Similarity=0.112 Sum_probs=277.0
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+. .+.++++||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|+++||++
T Consensus 49 a~~~p~~~a~~~~~~---~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~ 125 (614)
T PRK08180 49 AQEAPDRVFLAERGA---DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPVS 125 (614)
T ss_pred HHHCCCCceeeeccC---CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeec
Confidence 378999999987532 12345899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-----HHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcC--CCcEEEEcCCCCCCCCCCccCcccHHHhhc
Q 007715 265 DSFA-----AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA--PLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (592)
Q Consensus 265 ~~~~-----~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (592)
|.++ .+++.+++++++++++|+++... ....+.... ...+++... .. .......|+++..
T Consensus 126 ~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~-------~~~~~~~~~~~~~~~i~~~~-~~-----~~~~~~~~~~~~~ 192 (614)
T PRK08180 126 PAYSLVSQDFGKLRHVLELLTPGLVFADDGAA-------FARALAAVVPADVEVVAVRG-AV-----PGRAATPFAALLA 192 (614)
T ss_pred cccccccCCHHHHHHHHhcCCCcEEEEcCHHH-------HHHHHhhhccCCceEEEecC-CC-----CCcccccHHHHhc
Confidence 9998 79999999999999999976310 001111100 111222211 00 0011245666654
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCC--CCCEEEEecccchhchh-HH
Q 007715 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK--VGDVYCWPTNLGWVMGP-VI 414 (592)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~-~~ 414 (592)
.... ...........++++++|+|||||||.||||+++|+++...+......++.. .++++++.+|++|..+. +.
T Consensus 193 ~~~~--~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~ 270 (614)
T PRK08180 193 TPPT--AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHN 270 (614)
T ss_pred cccc--cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHH
Confidence 3211 0000111234578999999999999999999999999988777665555553 56899999999998886 56
Q ss_pred HHHHHHcCCEEEEeCCCCCh---hhHHHHHHHhCCcEEEccHHHHHHHHhcCc----CCCCCCccccEEEEecCCCChhh
Q 007715 415 LFSSFLNGATLALYQGSPLE---RSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----LEGLDWTKIRSFASTGETSNVDD 487 (592)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~---~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~----~~~~~l~sLr~v~~gGe~l~~~~ 487 (592)
++.+|+.|+++++.++.+++ ..+++.|+++++|+++++|+++..|++... ....++++||.+++||+++++++
T Consensus 271 ~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~ 350 (614)
T PRK08180 271 LGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDV 350 (614)
T ss_pred HHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHH
Confidence 77899999999997654443 467888999999999999999999876421 12345789999999999999999
Q ss_pred HHHHHHh----cc-CCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE----
Q 007715 488 DLWLSSK----AW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL---- 558 (592)
Q Consensus 488 ~~~~~~~----~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v---- 558 (592)
.+++.+. ++ ++++++.||+||++..++.... .....+++|+|++|++++|+|+ |. .|||+|
T Consensus 351 ~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~d~-------~~--~GEi~vrg~~ 420 (614)
T PRK08180 351 WDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTG-PLSRAGNIGLPAPGCEVKLVPV-------GG--KLEVRVKGPN 420 (614)
T ss_pred HHHHHHHHHhhcCCCceeeeeecccccCCceEeccc-ccCCCCcccCccCCcEEEEecC-------CC--CcEEEEecCc
Confidence 8887764 22 3679999999999754433222 2345689999999999999985 22 389998
Q ss_pred -ecccCCCchhhccccc-cccccccCcCC
Q 007715 559 -FPLYLGASDRLLNADH-EEVYFRGMPMY 585 (592)
Q Consensus 559 -~~gY~~~~~~~~~~~~-~~~~f~~~~~~ 585 (592)
+.||+++|+.+..... .+||.+||-|+
T Consensus 421 v~~GY~~~p~~t~~~~~~dgw~~TGDlg~ 449 (614)
T PRK08180 421 VTPGYWRAPELTAEAFDEEGYYRSGDAVR 449 (614)
T ss_pred cchhhcCChhHhHhhcccCCceeccceEE
Confidence 6899999998755443 34444555444
|
|
| >TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=401.27 Aligned_cols=357 Identities=20% Similarity=0.207 Sum_probs=288.9
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+|+++|+.+.++ ++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++
T Consensus 11 ~~~p~~~a~~~~~~--------~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 82 (515)
T TIGR03098 11 ARLPDATALVHHDR--------TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINP 82 (515)
T ss_pred HHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCC
Confidence 67999999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
.++.+++..++++++++++++++... +........++. ..+.+...... .........|+++......
T Consensus 83 ~~~~~~~~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 152 (515)
T TIGR03098 83 LLKAEQVAHILADCNVRLLVTSSERL------DLLHPALPGCHDLRTLILVGEPAHA--SEGGGESPSWPKLLALGDA-- 152 (515)
T ss_pred CCCHHHHHHHHHcCCCeEEEEccchh------hhhHhhhhcccccceEEEecCcccc--cCCccccccHHHhhccccc--
Confidence 99999999999999999999987532 111222222221 22233221110 0011223456665443221
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCC
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (592)
........+++++|+|||||||.||||+++|+++...+......+.+.++|++++..|++|+.++..++.++..|+
T Consensus 153 ----~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~ 228 (515)
T TIGR03098 153 ----DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGA 228 (515)
T ss_pred ----cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcCC
Confidence 1122334578999999999999999999999999888777777778899999999999999999888899999999
Q ss_pred EEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecc
Q 007715 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (592)
Q Consensus 424 ~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (592)
++++.+ ..++..+++.++++++|++.++|+++..|.+... ...+++++|.+++||+++++++.+.+.+.++++++++.
T Consensus 229 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 306 (515)
T TIGR03098 229 TVVLHD-YLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLM 306 (515)
T ss_pred EEEEcC-CCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeee
Confidence 999886 5688999999999999999999999999986532 22357899999999999999999999988877889999
Q ss_pred ccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhh
Q 007715 504 CGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (592)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~ 569 (592)
||+||++..+.........+.+++|+|++|++++|+|+++++++.|+. |||++ +.||+++++.+
T Consensus 307 YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~gy~~~~~~~ 375 (515)
T TIGR03098 307 YGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEE--GELVHRGALVAMGYWNDPEKT 375 (515)
T ss_pred eccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCCCCc--eEEEEcCchhhccccCCchhh
Confidence 999998754322221223456799999999999999999999999984 99998 78999998865
|
This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present. |
| >PRK08314 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=405.10 Aligned_cols=361 Identities=20% Similarity=0.208 Sum_probs=288.2
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++++|+++|+++.+. ++||+||.++++++|+.|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 20 a~~~~~~~a~~~~~~--------~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 91 (546)
T PRK08314 20 ARRYPDKTAIVFYGR--------AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPV 91 (546)
T ss_pred HHHcCCCcceeecCc--------eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEeec
Confidence 378999999999876 999999999999999999986 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCc-EEEEcCCCC---CCC--------------CCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGN---DVG--------------IPL 325 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~---~~~--------------~~~ 325 (592)
+|.++.+++.+++++++++++++++... +............ +++...... ... ...
T Consensus 92 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (546)
T PRK08314 92 NPMNREEELAHYVTDSGARVAIVGSELA------PKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALA 165 (546)
T ss_pred CcCcCHHHHHHHHHhCCCeEEEEccchh------hhHHHHhhccCcceEEEecchhhcccccccCccccccccccccccc
Confidence 9999999999999999999999987542 1111211111111 111110000 000 000
Q ss_pred ccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecc
Q 007715 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTN 405 (592)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~ 405 (592)
..+...|++....... .......++++|+|+|||||||.||||+++|++++..+......+++.++|++++..|
T Consensus 166 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p 239 (546)
T PRK08314 166 PGGVVAWKEALAAGLA------PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLP 239 (546)
T ss_pred ccccccHHHHhcccCC------CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcC
Confidence 1123345555432211 1223345789999999999999999999999999988887777788899999999999
Q ss_pred cchhchh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCC
Q 007715 406 LGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSN 484 (592)
Q Consensus 406 ~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~ 484 (592)
++|..++ +.++.++.+|+++++.+ ..++..++++++++++|++.++|+++..+.........+++++|.+++||++++
T Consensus 240 ~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 240 LFHVTGMVHSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred chHHHHHHHHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 9999987 56788999999999987 467889999999999999999999999988765445566889999999999999
Q ss_pred hhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----
Q 007715 485 VDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL----- 558 (592)
Q Consensus 485 ~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v----- 558 (592)
+++.+++...++ .+++|.||+||++...... ........++|+|++|++++|+| +++++++.|.. |||+|
T Consensus 319 ~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~ 394 (546)
T PRK08314 319 EAVAERLKELTG-LDYVEGYGLTETMAQTHSN-PPDRPKLQCLGIPTFGVDARVIDPETLEELPPGEV--GEIVVHGPQV 394 (546)
T ss_pred HHHHHHHHHHcC-CcEEecccccccccceecC-CCcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCc--eEEEEECCch
Confidence 999999888775 7899999999997643332 22223457899999999999999 57999999984 99999
Q ss_pred ecccCCCchhhcc
Q 007715 559 FPLYLGASDRLLN 571 (592)
Q Consensus 559 ~~gY~~~~~~~~~ 571 (592)
+.||+|+++.+..
T Consensus 395 ~~gY~~~~~~t~~ 407 (546)
T PRK08314 395 FKGYWNRPEATAE 407 (546)
T ss_pred hccccCChhHhhh
Confidence 7899999987643
|
|
| >PLN02387 long-chain-fatty-acid-CoA ligase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-46 Score=417.67 Aligned_cols=374 Identities=16% Similarity=0.115 Sum_probs=272.3
Q ss_pred CCCCCCceEEEEe-----------ccC----CCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHH
Q 007715 186 RRKEDNTVAIVWR-----------EDR----CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVII 249 (592)
Q Consensus 186 a~~~pd~~Al~~~-----------~~~----~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a 249 (592)
++.+||++|+.+. ++. ...+++..+||+||.++++++|++|.++ +++||+|+|+++|++||+++
T Consensus 68 ~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~ 147 (696)
T PLN02387 68 CKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLIA 147 (696)
T ss_pred HHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHH
Confidence 4889999999542 110 0124567799999999999999999999 99999999999999999999
Q ss_pred HHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCC----
Q 007715 250 YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGI---- 323 (592)
Q Consensus 250 ~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~---- 323 (592)
+|||+++|+++|||++.++.+++.++|++++++++|++.... ..+..+...++. .++.+.........
T Consensus 148 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~ 221 (696)
T PLN02387 148 LQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL------KKLIDISSQLETVKRVIYMDDEGVDSDSSLSG 221 (696)
T ss_pred HHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH------HHHHHHhhccCCceEEEEECCCCchhhhhhhc
Confidence 999999999999999999999999999999999999987532 222222223332 23333221110000
Q ss_pred CCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhc-CCCCCCEEEE
Q 007715 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCW 402 (592)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l~ 402 (592)
........|+++...+.. . ........++|+++|+|||||||.||||+++|++++..+......+ +++++|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l~ 297 (696)
T PLN02387 222 SSNWTVSSFSEVEKLGKE--N--PVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYLA 297 (696)
T ss_pred cCCcEEEEHHHHHHhhcc--C--CCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEEE
Confidence 000112346666554322 0 1112234579999999999999999999999999988776654443 5788999999
Q ss_pred ecccchhchhHHHHHHHHcCCEEEEeCCCC--C-----hhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCC---------
Q 007715 403 PTNLGWVMGPVILFSSFLNGATLALYQGSP--L-----ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--------- 466 (592)
Q Consensus 403 ~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~--~-----~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--------- 466 (592)
++|++|+.+....+..+..|+++.+..... + +..+...++++++|++.++|+++..|.+.....
T Consensus 298 ~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~ 377 (696)
T PLN02387 298 YLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLAK 377 (696)
T ss_pred ECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHHH
Confidence 999999998865556677888877643110 1 234567899999999999999999886431000
Q ss_pred ------------------------CC--------------CCccccEEEEecCCCChhhHHHHHHhccCCceeccccchh
Q 007715 467 ------------------------GL--------------DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (592)
Q Consensus 467 ------------------------~~--------------~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (592)
.. ..+++|.+++||+++++++.+++...+ +++++++||+||
T Consensus 378 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~~~YG~TE 456 (696)
T PLN02387 378 KLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIGQGYGLTE 456 (696)
T ss_pred HHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCeeEeechhh
Confidence 00 015899999999999999987776655 488999999999
Q ss_pred cccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCC---CCCCCcceeEEE-----ecccCCCchhhcccc
Q 007715 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPY---PDDQPCVGEVGL-----FPLYLGASDRLLNAD 573 (592)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~v---p~G~~giGel~v-----~~gY~~~~~~~~~~~ 573 (592)
+++..+.... .....+++|+|+|+++++|+| +++... .++. .|||+| +.||+++|+.|.+..
T Consensus 457 t~~~~~~~~~-~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p--~GEi~vrGp~v~~GY~~~pe~T~~~f 527 (696)
T PLN02387 457 TCAGATFSEW-DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMP--RGEIVIGGPSVTLGYFKNQEKTDEVY 527 (696)
T ss_pred cccceeecCc-ccCCCCccCCCCCceEEEEeeccccCcccCCCCCC--CceEEeccCcccchhcCCHHHHhhhh
Confidence 9765443332 234568999999999999999 554322 2333 389988 899999999885543
|
|
| >PLN02430 long-chain-fatty-acid-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-46 Score=414.77 Aligned_cols=386 Identities=18% Similarity=0.204 Sum_probs=278.7
Q ss_pred CCCCCCceEEEEec-cCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWRE-DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~-~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++++|+++|+.+.. .....++++.+||+||.++++++|++|.+. +++||+|+|+++|++||++++|||+++|+++||+
T Consensus 52 ~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl 131 (660)
T PLN02430 52 VEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPL 131 (660)
T ss_pred HHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 37899999997642 111123456789999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCC---CCCccCcccHHHhhcc
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG---IPLREQDLSWKDFLSS 338 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~ 338 (592)
++.++.+++.+++++++++++|+++... ...........+. .++.+........ ........+|+++...
T Consensus 132 ~~~~~~~~l~~il~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (660)
T PLN02430 132 YDTLGPGAVDYIVDHAEIDFVFVQDKKI-----KELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHM 206 (660)
T ss_pred ccCCCHHHHHHHHhccCCCEEEECHHHH-----HHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHh
Confidence 9999999999999999999999986421 0111111111111 2222221110000 0000112457776654
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhh-----cCCCCCCEEEEecccchhchhH
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-----IDLKVGDVYCWPTNLGWVMGPV 413 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~-----~~~~~~d~~l~~~~~~~~~~~~ 413 (592)
+... + .......++|+++|+|||||||.||||+++|++++..+...... .+++++|+++++.|++|..+..
T Consensus 207 ~~~~--~--~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~ 282 (660)
T PLN02430 207 GKEN--P--SETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRM 282 (660)
T ss_pred hccC--C--CCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHH
Confidence 3320 1 11123357899999999999999999999999998766544221 2467899999999999998875
Q ss_pred HHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc-----------------------------
Q 007715 414 ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----------------------------- 464 (592)
Q Consensus 414 ~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~----------------------------- 464 (592)
..+.++..|+++++..+ ++..+++.|+++++|++.++|+++..+.+...
T Consensus 283 ~~~~~l~~G~~i~~~~~--~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (660)
T PLN02430 283 IEEYFFRKGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGY 360 (660)
T ss_pred HHHHHHHcCCEEEEeCC--ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 55667899999988753 56789999999999999999999988764200
Q ss_pred --CCCC---C----------C-ccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCccc
Q 007715 465 --LEGL---D----------W-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS 528 (592)
Q Consensus 465 --~~~~---~----------l-~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG 528 (592)
.... + + ++||.+++||+++++++.++++ .++.+++++.||+||+++.++...+......+++|
T Consensus 361 ~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG 439 (660)
T PLN02430 361 SHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVG 439 (660)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeeccccCCCCCCcc
Confidence 0000 0 1 5899999999999999866554 44446799999999998654443332233468999
Q ss_pred ccCCCceEEEEC--CCC-CCCCCCCCcceeEEE-----ecccCCCchhhccccccccccccCcCC
Q 007715 529 TATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY 585 (592)
Q Consensus 529 ~p~~~~~v~IlD--~~g-~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~ 585 (592)
+|+++++++|+| +.| .+++.|. .|||+| +.||+++|+.|......+||.+||-++
T Consensus 440 ~p~~~~evki~d~~~~g~~~~~~~~--~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~ 502 (660)
T PLN02430 440 APAVYNELRLEEVPEMGYDPLGEPP--RGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGE 502 (660)
T ss_pred CCCCceEEEEEEcCCcCcccCCCCC--cceEEecCCCccccccCChHHhhhhhhccceeccceEE
Confidence 999999999987 333 4556555 499999 789999999885544344444555443
|
|
| >TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=402.53 Aligned_cols=366 Identities=18% Similarity=0.183 Sum_probs=283.9
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+|+++|+++.+. ..+..+.+||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|+++||++|
T Consensus 33 ~~~p~~~a~~~~~~--~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 110 (538)
T TIGR03208 33 ANCPDKPALTAYRD--GHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLMP 110 (538)
T ss_pred HHCCCceEEEeecc--cCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccCc
Confidence 67999999986321 111234899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
.++.+++.+++++++++++++++.+.. .........+....+. .++++... +...++.++.......
T Consensus 111 ~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 179 (538)
T TIGR03208 111 IFRERELSFMLNHADSKVFVVPSVFRG-FDHAAMARELQSKLPALRQVVVIDGD----------GDDSFDRVLMTPERDD 179 (538)
T ss_pred ccCHHHHHHHHHhcCCeEEEEcccccc-ccHHHHHHHHhccCCcceEEEEecCC----------CCcCHHHHhhcccccc
Confidence 999999999999999999999875420 0001111122222222 22222111 1122443332111000
Q ss_pred CCC---CCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHH
Q 007715 344 RPN---YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (592)
Q Consensus 344 ~~~---~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (592)
... ........++++|+|+|||||||.||||+++|+++...+......++++.+|++++.+|++|..+. +.++.++
T Consensus 180 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l 259 (538)
T TIGR03208 180 TPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFMYGLMMPL 259 (538)
T ss_pred ccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHHH
Confidence 000 011123457899999999999999999999999998888777777888899999999999998876 5688999
Q ss_pred HcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCc
Q 007715 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (592)
Q Consensus 420 ~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (592)
..|+++++.+ ..++..+++.|+++++|++..+|+++..+.........+++++|.+++||+++++++.+++...++ ++
T Consensus 260 ~~g~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~-~~ 337 (538)
T TIGR03208 260 ILNATAVLQD-IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELLG-AL 337 (538)
T ss_pred HcCCEEEecC-ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHcC-Ce
Confidence 9999999876 568899999999999999999999999987654333456789999999999999999988887764 78
Q ss_pred eeccccchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhh
Q 007715 500 IIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (592)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~ 569 (592)
++|.||+||++......... ......++|+|++|++++|+|++|++++.|++ |||+| +.||+++|+.+
T Consensus 338 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~--Gel~v~g~~~~~gy~~~~~~~ 411 (538)
T TIGR03208 338 IVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGET--GRLLVRGCSNFGGYLKRPHLN 411 (538)
T ss_pred EEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCCC--cEEEEecCcccccccCCcccc
Confidence 99999999987644332211 11224689999999999999999999999995 99998 78999999865
|
Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris. |
| >PRK09274 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-46 Score=409.17 Aligned_cols=360 Identities=15% Similarity=0.130 Sum_probs=274.7
Q ss_pred CCCCCCceEEEEeccCC--CCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 007715 186 RRKEDNTVAIVWREDRC--DESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~--~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vp 262 (592)
++++||++|+++.+.+. ....++++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|
T Consensus 16 a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~ 95 (552)
T PRK09274 16 AQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVL 95 (552)
T ss_pred HHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEE
Confidence 36899999999865410 011234799999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcC-C--CcEEEEcCCCCCCCCCCccCcccHHHhhccC
Q 007715 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (592)
Q Consensus 263 ld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (592)
++|.++.+++.+++++++++++|+++.. .....+.... . ..++.+.. . .......++++....
T Consensus 96 l~~~~~~~~l~~~l~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~~~i~~~~--~-----~~~~~~~~~~~~~~~ 161 (552)
T PRK09274 96 VDPGMGIKNLKQCLAEAQPDAFIGIPKA-------HLARRLFGWGKPSVRRLVTVGG--R-----LLWGGTTLATLLRDG 161 (552)
T ss_pred cCCCccHHHHHHHHHhcCCCEEEeccHH-------HHHHHHhccCccchhheecccc--c-----cccCCccHHHhcccC
Confidence 9999999999999999999999987521 0011111100 0 11111111 0 001122355543221
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHH
Q 007715 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (592)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L 419 (592)
.. .........++++++|+|||||||.||||+++|+++.+.+.+....+++.++|+.++..|+.+. .++
T Consensus 162 ~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~-------~~~ 230 (552)
T PRK09274 162 AA----APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFAL-------FGP 230 (552)
T ss_pred cc----ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHh-------hhh
Confidence 11 1112233456899999999999999999999999999888877778889999999888776542 234
Q ss_pred HcCCEEEEeCC------CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHH
Q 007715 420 LNGATLALYQG------SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (592)
Q Consensus 420 ~~G~~lvl~~~------~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~ 493 (592)
..|+++++.+. ..++..+++.|++++||+++++|+++..|.+.......++++||.+++||+++++++.+++.+
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~ 310 (552)
T PRK09274 231 ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRA 310 (552)
T ss_pred hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHH
Confidence 56888888642 347789999999999999999999999998765444567899999999999999999999998
Q ss_pred hcc-CCceeccccchhcccccccCCcC---------CCCccCcccccCCCceEEEECC---------CCCCCCCCCCcce
Q 007715 494 KAW-YNAIIESCGGTELSSAYIQGSLL---------QPQAFGAFSTATMTAGLVILDE---------CGVPYPDDQPCVG 554 (592)
Q Consensus 494 ~~~-~~~l~n~YG~TE~~~~~~~~~~~---------~~~~~~~iG~p~~~~~v~IlD~---------~g~~vp~G~~giG 554 (592)
.++ +++++|.||+||++.++...... ......++|+|++|++++|+|+ ++++++.|+ +|
T Consensus 311 ~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~--~G 388 (552)
T PRK09274 311 MLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGE--IG 388 (552)
T ss_pred HcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCC--ee
Confidence 886 37999999999997643322111 1112347999999999999994 568899999 49
Q ss_pred eEEE-----ecccCCCchhhccc
Q 007715 555 EVGL-----FPLYLGASDRLLNA 572 (592)
Q Consensus 555 el~v-----~~gY~~~~~~~~~~ 572 (592)
||+| +.||+|+|+.+...
T Consensus 389 el~v~g~~~~~GY~~~~~~t~~~ 411 (552)
T PRK09274 389 EIVVAGPMVTRSYYNRPEATRLA 411 (552)
T ss_pred EEEEecCcccccccCChHHhhhh
Confidence 9999 78999999987543
|
|
| >PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=398.49 Aligned_cols=347 Identities=21% Similarity=0.229 Sum_probs=281.9
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
+..+||++|+++.++ .+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 12 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i~ 83 (483)
T PRK03640 12 AFLTPDRTAIEFEEK--------KVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVLLN 83 (483)
T ss_pred HHhCCCceEEEeCCe--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEecC
Confidence 478999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+..+.+++..++++++++++++++.+.. ..... ....++++......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~---------~~~~~---------------------~~~~~~~~~~~~~~--- 130 (483)
T PRK03640 84 TRLSREELLWQLDDAEVKCLITDDDFEA---------KLIPG---------------------ISVKFAELMNGPKE--- 130 (483)
T ss_pred cCCCHHHHHHHHHhCCCCEEEEcchhhH---------HHhhh---------------------ccccHHHHhhcccc---
Confidence 9999999999999999999999875321 00000 00113333322111
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCE
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (592)
.........++++++++|||||||.||||+++|+++...+......++++++|++++..|++|..++..++.+++.|++
T Consensus 131 -~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~ 209 (483)
T PRK03640 131 -EAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMR 209 (483)
T ss_pred -cCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCE
Confidence 0111223456899999999999999999999999988777666667889999999999999999988778899999999
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 425 lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
+++.+ ..++..+++.|+++++|++.++|+++..|.+..... ....+||.+++||+++++.+.+++... ++++++.|
T Consensus 210 ~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~Y 285 (483)
T PRK03640 210 VVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSY 285 (483)
T ss_pred EEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeee
Confidence 99987 568899999999999999999999999998653222 234689999999999999998877764 58899999
Q ss_pred cchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccccc
Q 007715 505 GGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (592)
Q Consensus 505 G~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~ 578 (592)
|+||++..+...... .....+++|+|+++++++|+|+. +++|.|++ |||++ +.||+++++.+.... .+.|
T Consensus 286 G~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~~-~~~~~g~~--Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~ 361 (483)
T PRK03640 286 GMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKDG-VVVPPFEE--GEIVVKGPNVTKGYLNREDATRETF-QDGW 361 (483)
T ss_pred ccCcccccccccCcccccccCCCcccccCCcEEEEecCC-CcCCCCCc--eEEEEECcchhhhhcCCHHHHHHHH-hcCC
Confidence 999987543332222 23456899999999999999864 89999995 99999 789999998764433 3344
Q ss_pred c-ccC
Q 007715 579 F-RGM 582 (592)
Q Consensus 579 f-~~~ 582 (592)
| ++|
T Consensus 362 ~~tGD 366 (483)
T PRK03640 362 FKTGD 366 (483)
T ss_pred eeccc
Confidence 4 444
|
|
| >PRK08315 AMP-binding domain protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-45 Score=403.57 Aligned_cols=385 Identities=19% Similarity=0.175 Sum_probs=294.6
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+||++|+++.+.+ +.+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 26 ~~~~~~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 99 (559)
T PRK08315 26 AARYPDREALVYRDQG------LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTIN 99 (559)
T ss_pred HHHCCCCeEEEEcCCC------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEecC
Confidence 3789999999985431 3899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcC-------------CCcEEEEcCCCCCCCCCCccCccc
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-------------PLKAIVLPAIGNDVGIPLREQDLS 331 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~~~ 331 (592)
|..+.+++..++++++++++++++..... ............. +....++..... ...+...
T Consensus 100 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 173 (559)
T PRK08315 100 PAYRLSELEYALNQSGCKALIAADGFKDS-DYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDE-----KHPGMLN 173 (559)
T ss_pred ccCCHHHHHHHHHhcCCCEEEEecccccc-chHHHHHHhhhhhhcccccccccccCCCceeEEeeccc-----CCccccc
Confidence 99999999999999999999998754210 0000011110000 100111111110 0112344
Q ss_pred HHHhhccCCCCC-CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhc
Q 007715 332 WKDFLSSVDYHP-RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVM 410 (592)
Q Consensus 332 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 410 (592)
|+++........ ...........+++++||+|||||||.||||.++|++++..+......++++++|+++...|+.|..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 253 (559)
T PRK08315 174 FDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCIPVPLYHCF 253 (559)
T ss_pred HHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEEecCcHHHH
Confidence 555543221100 0001112234568899999999999999999999999988887777778899999999999999988
Q ss_pred hh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHH
Q 007715 411 GP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDL 489 (592)
Q Consensus 411 ~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~ 489 (592)
+. +.++.++..|+++++.....++..+++.++++++|++.++|+++..++........++++||.+++||++++.++++
T Consensus 254 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~~~ 333 (559)
T PRK08315 254 GMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIEVMK 333 (559)
T ss_pred HHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHHHHH
Confidence 87 56788999999999776667889999999999999999999999988876555556789999999999999999999
Q ss_pred HHHHhccCCceeccccchhcccccccCCcCC--CCccCcccccCCCceEEEECCC-CCCCCCCCCcceeEEE-----ecc
Q 007715 490 WLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGL-----FPL 561 (592)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~v~IlD~~-g~~vp~G~~giGel~v-----~~g 561 (592)
.+...++..+++|.||+||++.+++...... ..+..++|+|++|++++|+|++ |+++|.|+. |||+| ++|
T Consensus 334 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--GEl~v~g~~~~~g 411 (559)
T PRK08315 334 RVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQ--GELCTRGYSVMKG 411 (559)
T ss_pred HHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCc--eEEEEECchhhhh
Confidence 8888877667999999999986443322211 2346799999999999999977 999999995 99999 789
Q ss_pred cCCCchhhccccccc-cccccCcC
Q 007715 562 YLGASDRLLNADHEE-VYFRGMPM 584 (592)
Q Consensus 562 Y~~~~~~~~~~~~~~-~~f~~~~~ 584 (592)
|+++|+.+....... +|.+++-+
T Consensus 412 y~~~~~~~~~~~~~~~~~~TGD~~ 435 (559)
T PRK08315 412 YWNDPEKTAEAIDADGWMHTGDLA 435 (559)
T ss_pred hcCChhHHhhcCCCCCCEEccceE
Confidence 999998765443233 34445433
|
|
| >PRK06839 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-45 Score=397.73 Aligned_cols=359 Identities=20% Similarity=0.179 Sum_probs=286.3
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
|+.+||++|+++.+. .+||+||.++++++|++|++ . +++|++|+++++|++++++++|||+++|++++|+
T Consensus 12 a~~~p~~~a~~~~~~--------~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~~ 83 (496)
T PRK06839 12 AYLHPDRIAIITEEE--------EMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVPL 83 (496)
T ss_pred HHHCCCCeEEEECCc--------eEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEec
Confidence 478999999998766 99999999999999999986 6 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC-CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
++.++.+++..++++++++++++++.+. +....+..... ...+.+. +++++......
T Consensus 84 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~- 141 (496)
T PRK06839 84 NIRLTENELIFQLKDSGTTVLFVEKTFQ------NMALSMQKVSYVQRVISIT---------------SLKEIEDRKID- 141 (496)
T ss_pred CcccCHHHHHHHHHhcCceEEEEcHHHH------HHHHHhhhccCcceEEEec---------------chHhhhccCCC-
Confidence 9999999999999999999999987542 11112211111 1111111 12222221111
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHc
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLN 421 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~ 421 (592)
......++++++|+|||||||.||||+++|+++..........++++.+|+++...|+.|..++ +.++.++..
T Consensus 142 ------~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~ 215 (496)
T PRK06839 142 ------NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFA 215 (496)
T ss_pred ------CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhc
Confidence 1123456899999999999999999999999987666555566788899999999999998887 446788999
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|+++++.+ ..++..+++.++++++|++.++|++++.|++.......+++++|.+++||+++++++.+++... +++++
T Consensus 216 g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~ 292 (496)
T PRK06839 216 GGVIIVPR-KFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFG 292 (496)
T ss_pred CcEEEEcc-CCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeE
Confidence 99998865 5788999999999999999999999999998765555678899999999999999999888775 58899
Q ss_pred ccccchhcccccccCCc-CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccc
Q 007715 502 ESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~ 575 (592)
+.||+||++..++.... ......+++|+|+++++++|+|+++++++.|+. |||+| ++||+++|+.+......
T Consensus 293 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~~~~~~~~~~ 370 (496)
T PRK06839 293 QGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEV--GELLIRGPNVMKEYWNRPDATEETIQD 370 (496)
T ss_pred eeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCc--eEEEEECCCcchhhcCChHHHHHHHcC
Confidence 99999999854332222 123456799999999999999999999999995 99999 68999999876433333
Q ss_pred ccccccCcCC
Q 007715 576 EVYFRGMPMY 585 (592)
Q Consensus 576 ~~~f~~~~~~ 585 (592)
+||.++|-++
T Consensus 371 g~~~TGDl~~ 380 (496)
T PRK06839 371 GWLCTGDLAR 380 (496)
T ss_pred CCeeecceEE
Confidence 4455555433
|
|
| >PRK06187 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-45 Score=398.44 Aligned_cols=369 Identities=19% Similarity=0.191 Sum_probs=299.5
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+++.+|+++|+.+.++ .+||+||+++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++|+
T Consensus 15 ~~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~ 86 (521)
T PRK06187 15 GARKHPDKEAVYFDGR--------RTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPI 86 (521)
T ss_pred HHHHCCCceEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEec
Confidence 3488999999999887 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (592)
++.++.+++..+++.+++++++++.... +.+.++.+..+. +.+++...... ........+.++......
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (521)
T PRK06187 87 NIRLKPEEIAYILNDAEDRVVLVDSEFV------PLLAAILPQLPTVRTVIVEGDGPAA---PLAPEVGEYEELLAAASD 157 (521)
T ss_pred ccCCCHHHHHHHHHhcCCeEEEEcchHH------HHHHHHhhccCCccEEEEecCcccc---ccccccccHHHHhhcCCc
Confidence 9999999999999999999999997532 223333333332 23333222110 111234456665543322
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHc
Q 007715 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (592)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (592)
........++++++++|||||||.||+|.++|+++.+...+....++++++|++++.++++|..++...+.++..
T Consensus 158 -----~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~ 232 (521)
T PRK06187 158 -----TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYLALMA 232 (521)
T ss_pred -----cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHHHHHh
Confidence 112234456889999999999999999999999998888877778899999999999999999888766779999
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|+++++++. .++..+++.|+++++|++.++|+++..|.+.......+++++|.+++|||+++.++.+++.+.+ +++++
T Consensus 233 G~~~v~~~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~ 310 (521)
T PRK06187 233 GAKQVIPRR-FDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLV 310 (521)
T ss_pred CCEEEecCC-CCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchh
Confidence 999999875 4888999999999999999999999999987655556788999999999999999999998877 58999
Q ss_pred ccccchhcccccccCCcCCC-----CccCcccccCCCceEEEECCCCCCCCC--CCCcceeEEE-----ecccCCCchhh
Q 007715 502 ESCGGTELSSAYIQGSLLQP-----QAFGAFSTATMTAGLVILDECGVPYPD--DQPCVGEVGL-----FPLYLGASDRL 569 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~-----~~~~~iG~p~~~~~v~IlD~~g~~vp~--G~~giGel~v-----~~gY~~~~~~~ 569 (592)
|.||+||++.+......... ....++|+|++|+.++|+|++++++|. |+ .|||++ +.||+++++.+
T Consensus 311 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~--~Gel~v~~~~~~~~y~~~~~~~ 388 (521)
T PRK06187 311 QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGE--VGEIIVRGPWLMQGYWNRPEAT 388 (521)
T ss_pred eeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCC--eeEEEEECcchhhhhcCCHHHH
Confidence 99999999764443322211 256799999999999999999999999 88 499999 78999998866
Q ss_pred ccccccccccc
Q 007715 570 LNADHEEVYFR 580 (592)
Q Consensus 570 ~~~~~~~~~f~ 580 (592)
.... .+.||+
T Consensus 389 ~~~~-~~~~~~ 398 (521)
T PRK06187 389 AETI-DGGWLH 398 (521)
T ss_pred HHHh-hCCcee
Confidence 4433 333543
|
|
| >TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-45 Score=398.65 Aligned_cols=371 Identities=16% Similarity=0.157 Sum_probs=287.8
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+|+++|+++.+. .+||+||.++++++|.+|.+. +++|++|+++++|++++++++|||+++|+++++++
T Consensus 33 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 104 (527)
T TIGR02275 33 AARYPDAIAIICGNR--------QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLAL 104 (527)
T ss_pred HHHCCCceEEEeCCc--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccc
Confidence 378999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
+.++.+++.+++++++++++++++..... ........+....+. ..+++... .. ........+.....
T Consensus 105 ~~~~~~~~~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~-- 173 (527)
T TIGR02275 105 FSHRKSELTAYAQQIEPALYIIDRAHSLF-DYDAFARQLQSKLPTLRNIIVAGQ-TR-------VEAELFLWLESPAE-- 173 (527)
T ss_pred cccCHHHHHHHHHhcCCcEEEEcCccccc-chHHHHHHHHhhCCcceEEEEecC-CC-------CcchhhHHhhCcCc--
Confidence 99999999999999999999998753100 000011111112222 11122110 00 00011111111111
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhH--HHHHHHHc
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLN 421 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~L~~ 421 (592)
........++++|+|+|||||||.||||+++|+++...+......+.++.+|++++..|++|..++. .++.++..
T Consensus 174 ---~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~ 250 (527)
T TIGR02275 174 ---PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYA 250 (527)
T ss_pred ---cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhc
Confidence 1112244678999999999999999999999999988887777778889999999999999988764 47889999
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|+++++.+ ..++..+++.++++++|++..+|+++..|.+.......+++++|.+++||++++.++..++.+.++ .+++
T Consensus 251 G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~~~ 328 (527)
T TIGR02275 251 GGCVVLAP-DPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFG-CQLQ 328 (527)
T ss_pred CCeEEECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHhC-CeEE
Confidence 99998865 567889999999999999999999999988765555566889999999999999999999887764 7899
Q ss_pred ccccchhcccccccCCcCCCCccCcccccC-CCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccc
Q 007715 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~ 575 (592)
+.||+||++++.............++|+|+ ++..++|+|++|+++|+|+. |||++ +.||+++++.+......
T Consensus 329 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~--Gei~v~g~~~~~gY~~~~~~~~~~~~~ 406 (527)
T TIGR02275 329 QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGET--GMLLTRGPYTFRGYYKAPEHNAAAFDA 406 (527)
T ss_pred eeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCc--eEEEecCCccchhhcCChhHhHhhcCc
Confidence 999999976443221111223456899999 58999999999999999995 99998 78999999987554443
Q ss_pred cccc-ccC
Q 007715 576 EVYF-RGM 582 (592)
Q Consensus 576 ~~~f-~~~ 582 (592)
+.|| ++|
T Consensus 407 dg~~~TGD 414 (527)
T TIGR02275 407 EGFYYTGD 414 (527)
T ss_pred CCCEEcCc
Confidence 3455 444
|
Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB. |
| >PRK12583 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-45 Score=400.49 Aligned_cols=382 Identities=18% Similarity=0.184 Sum_probs=293.2
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+++|+++|+++.+.+ +.+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+++
T Consensus 29 ~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~~ 102 (558)
T PRK12583 29 ARFPDREALVVRHQA------LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNINP 102 (558)
T ss_pred HHCCCCeEEEecCCC------cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecCC
Confidence 789999999885431 3899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhc-------------CCCcEEEEcCCCCCCCCCCccCcccH
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-------------APLKAIVLPAIGNDVGIPLREQDLSW 332 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~~~~~~~~~ 332 (592)
.++.+++.+++++++++++++++..... +........... .+....++...... .+....|
T Consensus 103 ~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 176 (558)
T PRK12583 103 AYRASELEYALGQSGVRWVICADAFKTS-DYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP-----PPGFLAW 176 (558)
T ss_pred CCCHHHHHHHHHhcCCcEEEEecccccc-chhHHHHHHhhhhccccccccccccCCcceEEEEecCCC-----Cccccch
Confidence 9999999999999999999998754211 011111111000 11111111111100 1122345
Q ss_pred HHhhccCCCCCC-CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhch
Q 007715 333 KDFLSSVDYHPR-PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMG 411 (592)
Q Consensus 333 ~~~~~~~~~~~~-~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 411 (592)
++.......... ..........++++++++|||||||.||||+++|+++.+.+......++++++|+++...|++|..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 256 (558)
T PRK12583 177 HELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCFG 256 (558)
T ss_pred HhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhh
Confidence 544332211000 0001112335688999999999999999999999999888777777788999999999999999888
Q ss_pred h-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHH
Q 007715 412 P-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLW 490 (592)
Q Consensus 412 ~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~ 490 (592)
. +.++.++..|+++++.....++..+++.|+++++|++..+|+++..++........+++++|.+++||+++++++.++
T Consensus 257 ~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~ 336 (558)
T PRK12583 257 MVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMRR 336 (558)
T ss_pred HHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHHH
Confidence 7 567888999999988766678889999999999999999999998888765545567899999999999999999999
Q ss_pred HHHhccCCceeccccchhcccccccCCcC--CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccC
Q 007715 491 LSSKAWYNAIIESCGGTELSSAYIQGSLL--QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYL 563 (592)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~ 563 (592)
+.+.++..++++.||+||++.+.+..... ...+..++|+|++++.++|+|+++++++.|+. |||+| +.||+
T Consensus 337 ~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gy~ 414 (558)
T PRK12583 337 VMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDGATVPRGEI--GELCTRGYSVMKGYW 414 (558)
T ss_pred HHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCCCCCCCCCe--eEEEEEeCccchhhc
Confidence 98888767899999999998654432221 12345789999999999999998999999994 99998 78999
Q ss_pred CCchhhcccccccccc-ccC
Q 007715 564 GASDRLLNADHEEVYF-RGM 582 (592)
Q Consensus 564 ~~~~~~~~~~~~~~~f-~~~ 582 (592)
++++.+......+.|| ++|
T Consensus 415 ~~~~~~~~~~~~~~~~~TGD 434 (558)
T PRK12583 415 NNPEATAESIDEDGWMHTGD 434 (558)
T ss_pred CChHHHHhhcCCCCCeeccc
Confidence 9998764433233444 444
|
|
| >PRK07769 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=411.68 Aligned_cols=354 Identities=16% Similarity=0.160 Sum_probs=271.4
Q ss_pred CCCCCceEEEEeccC-CCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec-C
Q 007715 187 RKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI-A 264 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~-~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl-d 264 (592)
+.+||++|+++.+.. ...+..+.+||+||+++++++|++|.+.+++||+|+|+++|++++++++|||+++|+++||+ +
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~ 111 (631)
T PRK07769 32 KVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFD 111 (631)
T ss_pred HhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCC
Confidence 678999999985410 01123458999999999999999997669999999999999999999999999999999999 5
Q ss_pred CCCC--HHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC----CcEEEEcCCCCCCCCCCccCcccHHHhhcc
Q 007715 265 DSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (592)
Q Consensus 265 ~~~~--~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (592)
+..+ .+++.+++++++++++|+++... +.........+ ..++.+... .+..
T Consensus 112 ~~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-- 168 (631)
T PRK07769 112 PAEPGHVGRLHAVLDDCTPSAILTTTDSA------EGVRKFFRARPAKERPRVIAVDAV---------------PDEV-- 168 (631)
T ss_pred CCccchHHHHHHHHHhCCCCEEEEChHHH------HHHHHHHhhccccccceEEEcccc---------------cccc--
Confidence 6665 68999999999999999987532 11111111111 111111100 0000
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHH
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (592)
.. ........++++++|+|||||||+||||+++|+++...+......+++.++|++++..|++|+.++..++.+
T Consensus 169 -~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~~~~~ 242 (631)
T PRK07769 169 -GA-----TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLITVLLP 242 (631)
T ss_pred -cc-----ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHHHHHH
Confidence 00 011113456899999999999999999999999998877777777888999999999999999999878888
Q ss_pred HHcCCEEEEeCC-CC--ChhhHHHHHHHhCC---cEEEccHHHHHHHHhcC---c--CCCCCCccccEEEEecCCCChhh
Q 007715 419 FLNGATLALYQG-SP--LERSFGKFVQDAGV---TVLGTVPSLVKAWRNTN---C--LEGLDWTKIRSFASTGETSNVDD 487 (592)
Q Consensus 419 L~~G~~lvl~~~-~~--~~~~l~~~i~~~~v---t~l~~~Ps~l~~l~~~~---~--~~~~~l~sLr~v~~gGe~l~~~~ 487 (592)
++.|+++++++. .+ ++..+++.++++++ |++..+|+++..+.... . ....++++||.+++||+++++++
T Consensus 243 ~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~ 322 (631)
T PRK07769 243 ALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPAS 322 (631)
T ss_pred HhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHH
Confidence 899999998853 23 78889999999986 78999999887766431 1 11356899999999999999999
Q ss_pred HHHHHHhcc-----CCceeccccchhcccccccCCcCCC--------------------------CccCcccccCCCceE
Q 007715 488 DLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP--------------------------QAFGAFSTATMTAGL 536 (592)
Q Consensus 488 ~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG~p~~~~~v 536 (592)
.+++.+.++ ..+++|.||+||++..++....... ....++|+|++++++
T Consensus 323 ~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~ 402 (631)
T PRK07769 323 MRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWA 402 (631)
T ss_pred HHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEE
Confidence 998887762 2459999999998754332211100 012589999999999
Q ss_pred EEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 537 VILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 537 ~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
+|+| ++|+++|.|+ +|||+| +.||+|+|+.+..
T Consensus 403 ~ivd~~~g~~~~~ge--~GEl~v~gp~v~~GY~~~~~~t~~ 441 (631)
T PRK07769 403 VIVDPETASELPDGQ--IGEIWLHGNNIGTGYWGKPEETAA 441 (631)
T ss_pred EEEcCCCCcCCCCCC--EEEEEecCCCccccccCChhHHHH
Confidence 9999 6799999999 599999 7899999987643
|
|
| >PRK12582 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-46 Score=411.61 Aligned_cols=372 Identities=19% Similarity=0.161 Sum_probs=274.3
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+. ..+.++.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 59 a~~~pd~~a~~~~~~--~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~ 136 (624)
T PRK12582 59 AAEAPDRPWLAQREP--GHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVS 136 (624)
T ss_pred HHHCCCchheecccC--CCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeecc
Confidence 478999999987542 123456999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCH-----HHHHHHHHhcCeeEEEEecceeccCccccchhhHhhc---CCCcEEEEcCCCCCCCCCCccCcccHHHhh
Q 007715 265 DSFAA-----REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---APLKAIVLPAIGNDVGIPLREQDLSWKDFL 336 (592)
Q Consensus 265 ~~~~~-----~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 336 (592)
|.++. +++.+++++++++++|+++... .....+. ....++++..... ......++++.
T Consensus 137 p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~ 202 (624)
T PRK12582 137 PAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP--------FARALAALDLLDVTVVHVTGPGE------GIASIAFADLA 202 (624)
T ss_pred CccccccCCHHHHHHHHHhcCCcEEEecCHHH--------HHHHHHhhhhcCceEEEEcCCCc------ccccccHHHHh
Confidence 99985 9999999999999999986310 1111111 1112233221100 01223455554
Q ss_pred ccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCC---CCEEEEecccchhchh-
Q 007715 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV---GDVYCWPTNLGWVMGP- 412 (592)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~---~d~~l~~~~~~~~~~~- 412 (592)
..... ...........++++++|+|||||||.||||+++|++++..+......+.... .++++...|++|.++.
T Consensus 203 ~~~~~--~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~ 280 (624)
T PRK12582 203 ATPPT--AAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGN 280 (624)
T ss_pred hcCCc--chhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHH
Confidence 42211 00001112345789999999999999999999999999877665544444443 5799999999999887
Q ss_pred HHHHHHHHcCCEEEEeCCCCChh---hHHHHHHHhCCcEEEccHHHHHHHHhcCcC----CCCCCccccEEEEecCCCCh
Q 007715 413 VILFSSFLNGATLALYQGSPLER---SFGKFVQDAGVTVLGTVPSLVKAWRNTNCL----EGLDWTKIRSFASTGETSNV 485 (592)
Q Consensus 413 ~~~~~~L~~G~~lvl~~~~~~~~---~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~----~~~~l~sLr~v~~gGe~l~~ 485 (592)
..++.+|..|+++++.++.+++. .+++.++++++|++.++|+++..|.+.... ...++++||.+++||+++++
T Consensus 281 ~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~ 360 (624)
T PRK12582 281 ANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSD 360 (624)
T ss_pred HHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCH
Confidence 45667899999999976444433 456778899999999999999988754211 12346899999999999999
Q ss_pred hhHHHHHHhc----c-CCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE--
Q 007715 486 DDDLWLSSKA----W-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-- 558 (592)
Q Consensus 486 ~~~~~~~~~~----~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-- 558 (592)
++.+++.+.+ + +++++|.||+||++.++... .....+.+++|+|++|++++|+ |.|+ +|||+|
T Consensus 361 ~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~-~~~~~~~~svG~p~pg~~v~i~-------~~G~--~GEl~vrg 430 (624)
T PRK12582 361 DLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGT-HWDTERVGLIGLPLPGVELKLA-------PVGD--KYEVRVKG 430 (624)
T ss_pred HHHHHHHHHHHhhcCCCceEEeccccccccceeecc-cCCCCCCCCCCcCCCCcEEEEc-------cCCC--ceEEEEEC
Confidence 9998887752 2 35799999999997643321 2223456799999999999995 5677 499999
Q ss_pred ---ecccCCCchhhccccc-cccccccCcCC
Q 007715 559 ---FPLYLGASDRLLNADH-EEVYFRGMPMY 585 (592)
Q Consensus 559 ---~~gY~~~~~~~~~~~~-~~~~f~~~~~~ 585 (592)
+.||+++|+.+..... .+||.+||-++
T Consensus 431 ~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~ 461 (624)
T PRK12582 431 PNVTPGYHKDPELTAAAFDEEGFYRLGDAAR 461 (624)
T ss_pred CcccccccCCccchhhhcCccCCccccceEE
Confidence 7899999998754443 34555566554
|
|
| >PRK07786 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-45 Score=401.73 Aligned_cols=379 Identities=20% Similarity=0.171 Sum_probs=296.6
Q ss_pred cchhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHH
Q 007715 172 VLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIY 250 (592)
Q Consensus 172 ~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~ 250 (592)
..|+.+.+. .+ ++.+||++|+++.+. .+||.||.++++++|++|.+. +++||+|+|+++|++++++++
T Consensus 16 ~~n~~~~~~-~~--a~~~~~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 84 (542)
T PRK07786 16 RQNWVNQLA-RH--ALMQPDAPALRFLGN--------TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESV 84 (542)
T ss_pred ccCHHHHHH-HH--HHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 345544432 22 367999999998876 899999999999999999999 999999999999999999999
Q ss_pred HHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccC
Q 007715 251 LAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQ 328 (592)
Q Consensus 251 lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~ 328 (592)
+||+++|++++|+++..+.+++.+++++++++++++++... +....+....+. ..+++... . ..+
T Consensus 85 ~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~------~~~ 151 (542)
T PRK07786 85 LAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA------PVATAVRDIVPLLSTVVVAGGS-S------DDS 151 (542)
T ss_pred HHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH------HHHHHhhhccCccceEEEecCC-C------ccc
Confidence 99999999999999999999999999999999999987532 111122111121 12222110 0 112
Q ss_pred cccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCC-CCCCEEEEecccc
Q 007715 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL-KVGDVYCWPTNLG 407 (592)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~~d~~l~~~~~~ 407 (592)
...+++++..... .........+++++++|||||||.||||+++|+++...+......+++ ..++++++..|+.
T Consensus 152 ~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~ 226 (542)
T PRK07786 152 VLGYEDLLAEAGP-----AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLF 226 (542)
T ss_pred ccCHHHHhhccCC-----CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchH
Confidence 3456666543222 112233456789999999999999999999999998877766666666 6778999999999
Q ss_pred hhchhHHHHHHHHcCCEEEEeC-CCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChh
Q 007715 408 WVMGPVILFSSFLNGATLALYQ-GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (592)
Q Consensus 408 ~~~~~~~~~~~L~~G~~lvl~~-~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~ 486 (592)
|..++..++.++..|+++++.+ ...++..+++.|+++++|.++.+|+++..|.......... .++|.+++||++++++
T Consensus 227 ~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~ 305 (542)
T PRK07786 227 HIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDT 305 (542)
T ss_pred HHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHH
Confidence 9988888999999999999975 3458889999999999999999999999998765433222 3799999999999999
Q ss_pred hHHHHHHhccCCceeccccchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ec
Q 007715 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FP 560 (592)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~ 560 (592)
+.+++.+.+++.++++.||+||++...+..... ......++|+|++|+.++|+|+++++++.|+ +|||++ ++
T Consensus 306 ~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~--~Gel~v~g~~~~~ 383 (542)
T PRK07786 306 LLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGE--VGEIVYRAPTLMS 383 (542)
T ss_pred HHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCC--ceEEEEEChhhhh
Confidence 999999988888999999999997543322211 1234578999999999999999999999998 599998 78
Q ss_pred ccCCCchhhccccccccccccC
Q 007715 561 LYLGASDRLLNADHEEVYFRGM 582 (592)
Q Consensus 561 gY~~~~~~~~~~~~~~~~f~~~ 582 (592)
||+++++.+......+||.++|
T Consensus 384 gy~~~~~~~~~~f~~~~~~TGD 405 (542)
T PRK07786 384 GYWNNPEATAEAFAGGWFHSGD 405 (542)
T ss_pred hhcCCHHHHHHHhhCCcccccc
Confidence 9999999875443334444444
|
|
| >PLN02330 4-coumarate--CoA ligase-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-45 Score=398.94 Aligned_cols=367 Identities=19% Similarity=0.180 Sum_probs=281.4
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+|+++|+++...+ +.+||+||.++++++|+.|++. +++||+|+++++|++++++++|||+++|++++|+|
T Consensus 38 a~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 38 AELYADKVAFVEAVTG------KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGAN 111 (546)
T ss_pred hhcCCCccEEEecCCC------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCC
Confidence 3789999999874221 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+.++.+++.+++++++++++|+++..... .. .....++++.... ......|.+++..... .
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~------~~----~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~--~ 172 (546)
T PLN02330 112 PTALESEIKKQAEAAGAKLIVTNDTNYGK------VK----GLGLPVIVLGEEK-------IEGAVNWKELLEAADR--A 172 (546)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEccchhhh------Hh----hcCCcEEEecCCC-------CCCcccHHHHHhhccc--c
Confidence 99999999999999999999999864321 11 1112233332111 1123456666544322 0
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC--CCCCCEEEEecccchhchhH-HHHHHHHc
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPV-ILFSSFLN 421 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~-~~~~~L~~ 421 (592)
..........++++++|+|||||||.||||+++|+++...+......+. ....++++...|++|..++. .++.+|..
T Consensus 173 ~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~ 252 (546)
T PLN02330 173 GDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRN 252 (546)
T ss_pred CcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhc
Confidence 1111122344689999999999999999999999998765543221111 22346788889999988874 56788999
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCc--cccEEEEecCCCChhhHHHHHHhccCCc
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT--KIRSFASTGETSNVDDDLWLSSKAWYNA 499 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~--sLr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (592)
|+++++.+ ..++..+++.++++++|++.++|+++..|.........+++ ++|.+++||+++++++.+++...+++++
T Consensus 253 g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~ 331 (546)
T PLN02330 253 KGKVVVMS-RFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQ 331 (546)
T ss_pred CCEEEEec-ccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCe
Confidence 99999886 57888999999999999999999999999876544344444 4789999999999999999998887789
Q ss_pred eeccccchhcccccccCCcCC----CCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhh
Q 007715 500 IIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (592)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~ 569 (592)
+++.||+||++.......... .....++|+|++|++++|+| ++++++|+|+. |||+| +.||+++++.+
T Consensus 332 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~--Gel~v~g~~~~~gy~~~~~~~ 409 (546)
T PLN02330 332 VQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTP--GELCVRSQCVMQGYYNNKEET 409 (546)
T ss_pred EEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCc--eEEEEecchhhhhhccCccch
Confidence 999999999875433221111 12346899999999999999 67999999994 99998 78999999876
Q ss_pred ccccccccccc
Q 007715 570 LNADHEEVYFR 580 (592)
Q Consensus 570 ~~~~~~~~~f~ 580 (592)
......+.||.
T Consensus 410 ~~~~~~~g~~~ 420 (546)
T PLN02330 410 DRTIDEDGWLH 420 (546)
T ss_pred hhhccCCCcee
Confidence 54433334443
|
|
| >PRK08316 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-45 Score=397.76 Aligned_cols=373 Identities=19% Similarity=0.156 Sum_probs=295.7
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+||++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 21 a~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 92 (523)
T PRK08316 21 ARRYPDKTALVFGDR--------SWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVN 92 (523)
T ss_pred HHHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecc
Confidence 378899999998876 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+.++.+++.++++++++++++++.... .......+......+.+..... ..........++++......
T Consensus 93 ~~~~~~~i~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--- 161 (523)
T PRK08316 93 FMLTGEELAYILDHSGARAFLVDPALA------PTAEAALALLPVDTLILSLVLG--GREAPGGWLDFADWAEAGSV--- 161 (523)
T ss_pred cccCHHHHHHHHHhCCCCEEEEccchH------HHHHHHhhhcCccceeeeeccc--ccccccchhhHHHHHhcCCC---
Confidence 999999999999999999999987532 1122221111111111111000 00011223344444432221
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhH-HHHHHHHcCC
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGA 423 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~ 423 (592)
.........+++++++|||||||+||+|+++|+++++........+++.++|+++...|+.|..+.. .++.++..|+
T Consensus 162 --~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~ 239 (523)
T PRK08316 162 --AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGA 239 (523)
T ss_pred --ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCc
Confidence 1122345678999999999999999999999999988877777778899999999999999988874 3556788999
Q ss_pred EEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecc
Q 007715 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (592)
Q Consensus 424 ~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (592)
++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||++++.++.+.+++.++++++++.
T Consensus 240 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 318 (523)
T PRK08316 240 TNVILD-APDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNC 318 (523)
T ss_pred eEEEec-CCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeee
Confidence 999986 4678999999999999999999999999998765556678899999999999999999999988877899999
Q ss_pred ccchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccc
Q 007715 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (592)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~ 577 (592)
||+||++.+....... .....+++|+|+++++++|+|++|++++.|+. |||++ +.||+++++.+.......|
T Consensus 319 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gei~v~~~~~~~~y~~~~~~~~~~~~~~~ 396 (523)
T PRK08316 319 YGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEV--GEIVHRSPQLMLGYWDDPEKTAEAFRGGW 396 (523)
T ss_pred ecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCc--ceEEEECCchhhhhcCCHHHHHHHhhCCC
Confidence 9999997654433221 22345799999999999999999999999994 99999 7899999987644433344
Q ss_pred ccccC
Q 007715 578 YFRGM 582 (592)
Q Consensus 578 ~f~~~ 582 (592)
|.++|
T Consensus 397 ~~TGD 401 (523)
T PRK08316 397 FHSGD 401 (523)
T ss_pred eeccc
Confidence 44444
|
|
| >PRK06145 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-45 Score=393.82 Aligned_cols=363 Identities=17% Similarity=0.140 Sum_probs=289.2
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+|+++|+++.+. .+||.||.++++++|++|.+. +++|++|+++++|++++++++|||+++|++++|++
T Consensus 12 ~~~~~~~~a~~~~~~--------~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 83 (497)
T PRK06145 12 ARRTPDRAALVYRDQ--------EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPIN 83 (497)
T ss_pred HHHCCCceEEEECCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecc
Confidence 378999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+.++.+++.+++++++++++++++..... .. .....+.+.... ...+..+......
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~----------~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~--- 139 (497)
T PRK06145 84 YRLAADEVAYILGDAGAKLLLVDEEFDAI----------VA-LETPKIVIDAAA----------QADSRRLAQGGLE--- 139 (497)
T ss_pred cccCHHHHHHHHHhcCCcEEEEccchhhh----------hh-cccceEEecCcc----------cchhHHHhccCCC---
Confidence 99999999999999999999998753210 00 011112221100 0011111110000
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCC
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGA 423 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~ 423 (592)
........++++++++|||||||.||||+++|+++..........+++..+++++...|++|..++ +..+.++..|+
T Consensus 140 --~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~ 217 (497)
T PRK06145 140 --IPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGG 217 (497)
T ss_pred --CCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccC
Confidence 011123456899999999999999999999999988766666667788999999999999998777 44577899999
Q ss_pred EEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecc
Q 007715 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (592)
Q Consensus 424 ~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (592)
++++.+ ..++..+++.++++++|++.++|+++..|+........+++++|.+++|||+++.++.+++.+.+++.++++.
T Consensus 218 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~ 296 (497)
T PRK06145 218 TLRIHR-EFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDA 296 (497)
T ss_pred EEEECC-cCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEe
Confidence 999876 5688999999999999999999999999987765555667899999999999999999999888877899999
Q ss_pred ccchhcccccccCCc-CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccc
Q 007715 504 CGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (592)
Q Consensus 504 YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~ 577 (592)
||+||++..++.... ......+++|+|+++++++|+|++++++|+|+. |||++ +.||+++++.+......+|
T Consensus 297 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~ 374 (497)
T PRK06145 297 YGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMK--GEICMRGPKVTKGYWKDPEKTAEAFYGDW 374 (497)
T ss_pred ecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCc--eEEEEECcchhhhhcCChHHHHHHHhCCC
Confidence 999999864433222 122345789999999999999999999999984 99999 7899999997744433445
Q ss_pred ccccCcCC
Q 007715 578 YFRGMPMY 585 (592)
Q Consensus 578 ~f~~~~~~ 585 (592)
|.++|-++
T Consensus 375 ~~TGDl~~ 382 (497)
T PRK06145 375 FRSGDVGY 382 (497)
T ss_pred eeccceEE
Confidence 55555443
|
|
| >PRK12492 long-chain-fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=398.38 Aligned_cols=378 Identities=19% Similarity=0.185 Sum_probs=282.5
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++++|+++|+++.+. .+||.||.++++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|+
T Consensus 34 ~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~~ 105 (562)
T PRK12492 34 CKKFADRPAFSNLGV--------TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNT 105 (562)
T ss_pred HHhCCCCeeEecCCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEecc
Confidence 378999999997665 89999999999999999997 5 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEE---------------EcC----CCCCCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV---------------LPA----IGNDVGIP 324 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------i~~----~~~~~~~~ 324 (592)
++.++.+++.+++++++++++++++.+... ...+.......... ... ........
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK12492 106 NPLYTAREMRHQFKDSGARALVYLNMFGKL------VQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAY 179 (562)
T ss_pred CccCCHHHHHHHHhccCceEEEeccccchH------HHHhhhccCceEEEeechhhccccccchhccccccccccccccc
Confidence 999999999999999999999998653211 11111100000000 000 00000000
Q ss_pred CccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC---------CC
Q 007715 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID---------LK 395 (592)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~---------~~ 395 (592)
..+....|+++...... ..........+++++|+|||||||.||||+++|+++...+......+. +.
T Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK12492 180 HLPQAVPFKQALRQGRG----LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMK 255 (562)
T ss_pred CCcccccHHHHHhccCC----CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccccccc
Confidence 01122345555433221 111122345689999999999999999999999998766554433322 22
Q ss_pred C-CCEEEEecccchhchh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccc
Q 007715 396 V-GDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473 (592)
Q Consensus 396 ~-~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sL 473 (592)
. .++++...|+.|..+. +.++..+..|+++++.....++..+++.|+++++|++..+|+++..|.+.......+++++
T Consensus 256 ~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l 335 (562)
T PRK12492 256 EGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSAL 335 (562)
T ss_pred CCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccce
Confidence 3 3567888999998887 4456678889888877645578889999999999999999999999988765555678899
Q ss_pred cEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcc
Q 007715 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCV 553 (592)
Q Consensus 474 r~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~gi 553 (592)
|.+++||+++++++.+++...+ ++++++.||+||++.+++..........+++|+|+++++++|+|++++++|+|+.
T Consensus 336 r~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~~-- 412 (562)
T PRK12492 336 KLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVIDDDGNELPLGER-- 412 (562)
T ss_pred eEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCCcccccCCccceecCCCEEEEECCCCCCCCCCCc--
Confidence 9999999999999998887765 4899999999999765443332223345789999999999999999999999995
Q ss_pred eeEEE-----ecccCCCchhhccccc-cccccccCcC
Q 007715 554 GEVGL-----FPLYLGASDRLLNADH-EEVYFRGMPM 584 (592)
Q Consensus 554 Gel~v-----~~gY~~~~~~~~~~~~-~~~~f~~~~~ 584 (592)
|||+| ++||+++|+.+..... ..||.+||-+
T Consensus 413 Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g 449 (562)
T PRK12492 413 GELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIA 449 (562)
T ss_pred eEEEEeCCccccccccCchhhhhcccCCCceecCcEE
Confidence 99999 7899999998744432 2344455533
|
|
| >PRK12476 putative fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=408.18 Aligned_cols=354 Identities=19% Similarity=0.188 Sum_probs=268.7
Q ss_pred CCCCCceEEEEeccCC-CCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec-C
Q 007715 187 RKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI-A 264 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~-~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl-d 264 (592)
+++|+++|+++.+... ..+.++.+||+||.++++++|++|.+.+++||+|+|+++|++++++++|||+++|++++|+ +
T Consensus 45 ~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 45 ANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred HhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhHHHHHHHHHHcCceeEecCC
Confidence 6789999999854210 1123458999999999999999997669999999999999999999999999999999999 6
Q ss_pred CCCC--HHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC----CcEEEEcCCCCCCCCCCccCcccHHHhhcc
Q 007715 265 DSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (592)
Q Consensus 265 ~~~~--~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (592)
+.++ .+++.+++++++++++|+++... +....+..... ..++.+.. +...
T Consensus 125 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~------------------~~~~ 180 (612)
T PRK12476 125 PELPGHAERLDTALRDAEPTVVLTTTAAA------EAVEGFLRNLPRLRRPRVIAIDA------------------IPDS 180 (612)
T ss_pred CCcchhHHHHHHHHHhCCCCEEEEcHHHH------HHHHHHHhhcccccCceEEEecc------------------cccc
Confidence 8877 88999999999999999987532 11111111111 11222210 0000
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC-CCCCCEEEEecccchhchhHHHHH
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGPVILFS 417 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~~ 417 (592)
.. .........+++++||+|||||||+||||+++|+++.+.+......++ +.+++++++.+|++|+.++..++.
T Consensus 181 ~~-----~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~~ 255 (612)
T PRK12476 181 AG-----ESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIGF 255 (612)
T ss_pred cc-----ccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHHH
Confidence 00 011112345689999999999999999999999999877666555666 788899999999999999877677
Q ss_pred HHHcCCEEEEeCC-CC--ChhhHHHHHH--HhCCcEEEccHHHHHHHHhcCc----CCCCCCccccEEEEecCCCChhhH
Q 007715 418 SFLNGATLALYQG-SP--LERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNC----LEGLDWTKIRSFASTGETSNVDDD 488 (592)
Q Consensus 418 ~L~~G~~lvl~~~-~~--~~~~l~~~i~--~~~vt~l~~~Ps~l~~l~~~~~----~~~~~l~sLr~v~~gGe~l~~~~~ 488 (592)
+++.|+++++... .+ ++..+++.++ ++++|++..+|+++..+..... ....++++|| +++||+++++++.
T Consensus 256 ~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~ 334 (612)
T PRK12476 256 PAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAV 334 (612)
T ss_pred HHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHH
Confidence 7777887777653 22 7788999995 5899999999999888775421 1234688999 9999999999999
Q ss_pred HHHHHhcc-----CCceeccccchhcccccccCCcCC--------------------------CCccCcccccCCCceEE
Q 007715 489 LWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQ--------------------------PQAFGAFSTATMTAGLV 537 (592)
Q Consensus 489 ~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~--------------------------~~~~~~iG~p~~~~~v~ 537 (592)
+++.+.++ ..+++|.||+||++..++...... ....+++|+|++|++++
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ 414 (612)
T PRK12476 335 TTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAV 414 (612)
T ss_pred HHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEE
Confidence 88887652 235999999999875433221110 00135899999999999
Q ss_pred EECCC-CCCCCCCCCcceeEEE-----ecccCCCchhhccc
Q 007715 538 ILDEC-GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNA 572 (592)
Q Consensus 538 IlD~~-g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~ 572 (592)
|+|++ |+++|+|++ |||++ +.||+|+|+.+.+.
T Consensus 415 ivd~~~g~~~~~g~~--GEl~v~g~~v~~GY~~~~~~t~~~ 453 (612)
T PRK12476 415 IVDPDTGAELPDGEV--GEIWLHGDNIGRGYWGRPEETERT 453 (612)
T ss_pred EEeCCCCcCCCCCCE--EEEEEcCCcccccccCChHHHHHH
Confidence 99987 999999994 99999 78999999977443
|
|
| >TIGR02262 benz_CoA_lig benzoate-CoA ligase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=393.42 Aligned_cols=378 Identities=21% Similarity=0.250 Sum_probs=296.1
Q ss_pred chhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHH
Q 007715 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251 (592)
Q Consensus 173 ~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~l 251 (592)
+|.+++.++.+. ++.+||++|++..+. .+||.||.++++++|++|.+. +++|++|+++++|+++++++++
T Consensus 3 ~~~~~~~~~~~~-~~~~p~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~ 73 (508)
T TIGR02262 3 YNAAEDLLDRNV-VEGRGGKTAFIDDIS--------SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFL 73 (508)
T ss_pred chHHHHHHHHHH-hcccCCceEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 566777776642 467999999998766 899999999999999999999 9999999999999999999999
Q ss_pred HHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCc-EEEEcCCCCCCCCCCccCcc
Q 007715 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDL 330 (592)
Q Consensus 252 A~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~ 330 (592)
||+++|++++|+++.++.+++.++++.++++++++++... +.+.......+.. .++...... ....
T Consensus 74 a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 140 (508)
T TIGR02262 74 GAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL------PVIKAALGKSPHLEHRVVVGRPE-------AGEV 140 (508)
T ss_pred HHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH------HHHHHHHhcCCCccEEEEeCCCC-------cccc
Confidence 9999999999999999999999999999999999987532 1222222222221 122211100 1122
Q ss_pred cHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHH-hhhhcCCCCCCEEEEecccchh
Q 007715 331 SWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE-GWAHIDLKVGDVYCWPTNLGWV 409 (592)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~-~~~~~~~~~~d~~l~~~~~~~~ 409 (592)
.+.++...... ........++++++|+|||||||.||||+++|+++...+.. ....++++++|+++...|++|+
T Consensus 141 ~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~ 215 (508)
T TIGR02262 141 QLAELLATESE-----QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFA 215 (508)
T ss_pred cHHHHhhcCCC-----ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHH
Confidence 34444332211 11222345689999999999999999999999998776654 3456688999999999999999
Q ss_pred chh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhH
Q 007715 410 MGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDD 488 (592)
Q Consensus 410 ~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~ 488 (592)
.++ ..++.++..|+++++.++..++..+++.|+++++|++.++|+++..+............++|.+++||+++++++.
T Consensus 216 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~ 295 (508)
T TIGR02262 216 YGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVG 295 (508)
T ss_pred HHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHH
Confidence 887 4577889999999998866788999999999999999999999988876544333456799999999999999998
Q ss_pred HHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccC
Q 007715 489 LWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYL 563 (592)
Q Consensus 489 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~ 563 (592)
+.+.+.++ +++++.||+||++.+.... .......+++|+|++|++++|+|++++++|+|++ |||++ +.||+
T Consensus 296 ~~~~~~~~-~~v~~~YG~tE~~~~~~~~-~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~--Gel~i~~~~~~~gY~ 371 (508)
T TIGR02262 296 QRWQARFG-VDIVDGIGSTEMLHIFLSN-LPGDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEP--GELLISGPSSATMYW 371 (508)
T ss_pred HHHHHHhC-CchhhCccccccCceeecC-CccCCCCCCcCCCCCCcEEEEECCCCCCCCCCCe--eEEEEecCccccccC
Confidence 88888764 7899999999998644332 2223345789999999999999999999999995 99999 68999
Q ss_pred CCchhhcccccccccc-ccC
Q 007715 564 GASDRLLNADHEEVYF-RGM 582 (592)
Q Consensus 564 ~~~~~~~~~~~~~~~f-~~~ 582 (592)
++|+.+.... .+.|| ++|
T Consensus 372 ~~~~~~~~~~-~~~~~~TGD 390 (508)
T TIGR02262 372 NNRAKTRDTF-QGEWTRSGD 390 (508)
T ss_pred CCHHHhHhhh-hcCceeccc
Confidence 9998774433 33454 444
|
Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases. |
| >KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-45 Score=380.61 Aligned_cols=386 Identities=17% Similarity=0.131 Sum_probs=297.8
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
+..+|+.+++-+....+..+.+..+||.|..+++.++|..|+.+ +++++.|||+.-|++||+++..||...|++.|||.
T Consensus 85 ~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplY 164 (691)
T KOG1256|consen 85 VEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLY 164 (691)
T ss_pred hhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeecc
Confidence 47899999998766322356889999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhh-----cCCCcEEEEcCCCCC-CCCCCc----cCcccHHH
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG-----AAPLKAIVLPAIGND-VGIPLR----EQDLSWKD 334 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~-~~~~~~----~~~~~~~~ 334 (592)
...+++.+.+|++++.+.+||+|++- ....+.+ ..+....+|...+.. ...... -...+|++
T Consensus 165 dTlg~ea~~~Ii~~~e~~iv~vd~~~--------k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e 236 (691)
T KOG1256|consen 165 DTLGAEAVHYIINHAEISIVFVDNAK--------KAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDE 236 (691)
T ss_pred cCCCHHHHHHHHHhcceeEEEEeCHH--------HHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHH
Confidence 99999999999999999999999651 2233332 133333333222211 111111 12578999
Q ss_pred hhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHH---hhh---hcCCCCCCEEEEecccch
Q 007715 335 FLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWA---HIDLKVGDVYCWPTNLGW 408 (592)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~---~~~~~~~d~~l~~~~~~~ 408 (592)
+++.+... ..... .+..|+|+|.|+|||||||.|||||+||+|++..+.. ... .......|++++++|++|
T Consensus 237 ~~~lG~~~--~~~~~-~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAH 313 (691)
T KOG1256|consen 237 FEELGKKN--QRKPR-VPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAH 313 (691)
T ss_pred HHhhcccc--cCCCC-CCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHH
Confidence 99887641 11111 4667899999999999999999999999999875432 111 112234699999999999
Q ss_pred hchhHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhc--------------------------
Q 007715 409 VMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT-------------------------- 462 (592)
Q Consensus 409 ~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~-------------------------- 462 (592)
++........+..|+++.+..+ |+..+.+.|++.++|++..||.+|..+-+.
T Consensus 314 i~er~~~~~~~~~G~~IgF~~g--D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~ 391 (691)
T KOG1256|consen 314 IFERVVELYTFYIGAKIGFARG--DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEH 391 (691)
T ss_pred HHHHHHHHhHhhcccEEEEecC--ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 9998665566799999999874 567788889999999999999999877431
Q ss_pred ----CcCC-CCC--------------CccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCc
Q 007715 463 ----NCLE-GLD--------------WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQA 523 (592)
Q Consensus 463 ----~~~~-~~~--------------l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 523 (592)
.... ... -..+|.+++|++|+++++...++..++ ++|+++||+|||++..+...+... .
T Consensus 392 ~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g-~~v~eGYGlTEts~g~~~~~~~d~-~ 469 (691)
T KOG1256|consen 392 RLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG-CRVLEGYGLTETSAGTTLTLPGDN-V 469 (691)
T ss_pred HhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC-ceeeecccccccCCceEeccCCCC-C
Confidence 0000 000 037899999999999999998887764 899999999999955444444333 7
Q ss_pred cCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccccccccCcCCcceec
Q 007715 524 FGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMVH 590 (592)
Q Consensus 524 ~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~~gy~~ 590 (592)
.+++|.|+|+++++++| ++.+--+.|.. ||||| +.||++||++|.+..+.++||.+.+ -|+|.
T Consensus 470 lgsvG~p~p~~~vKL~dvpe~ny~a~~~~--GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGD--iG~~~ 538 (691)
T KOG1256|consen 470 LGSVGPPVPGNEVKLVDVPEMNYDADGSK--GEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGD--IGEWD 538 (691)
T ss_pred CCCcCCcccCceEEEechHHhCcCcCCCc--ceEEEecchhceeccCChHHHhhhhcccccccccc--ceeEC
Confidence 89999999999999999 56666566653 99999 8999999999988888888886533 45554
|
|
| >PRK06087 short chain acyl-CoA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=396.49 Aligned_cols=370 Identities=21% Similarity=0.229 Sum_probs=286.6
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+||++|+++.++ +.+||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 34 ~~~pd~~a~~~~~~-------~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 34 RAMPDKIAVVDNHG-------ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred HHCCCceEEEcCCC-------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccch
Confidence 68999999997653 2899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
.++.+++.+++++++++++++++..... ...+....+...... .++.+..... ......+.++......
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-- 177 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAPTLFKQT-RPVDLILPLQNQLPQLQQIVGVDKLAP------ATSSLSLSQIIADYEP-- 177 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEecccccc-cHHHHHHHHHhhCCCCcEEEEeCCcCC------CcCccCHHHHhccCCc--
Confidence 9999999999999999999998643110 011111122222221 2222221110 0112245555443221
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcC
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G 422 (592)
........++++++|+|||||||.||||+++|++++.........++++++|++++..|++|..++ ..++.+++.|
T Consensus 178 ---~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g 254 (547)
T PRK06087 178 ---LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIG 254 (547)
T ss_pred ---ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcC
Confidence 011223456899999999999999999999999998777776677788999999999999999887 4577889999
Q ss_pred CEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceec
Q 007715 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (592)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (592)
+++++.+ ..++..+++.|+++++|++..+|+.+..+++.......+++++|.+++||+++++++.+.+... ++++++
T Consensus 255 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~ 331 (547)
T PRK06087 255 ARSVLLD-IFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLS 331 (547)
T ss_pred CEEEecC-CCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEE
Confidence 9999976 5688899999999999999988887777776544445567899999999999999998877654 589999
Q ss_pred cccchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccc
Q 007715 503 SCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEE 576 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~ 576 (592)
.||+||++......... ......++|+|++|+.++|+|++++++|.|+. |||++ +.||+++++.+......+
T Consensus 332 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gy~~~~~~~~~~~~~~ 409 (547)
T PRK06087 332 VYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCE--GEEASRGPNVFMGYLDEPELTARALDEE 409 (547)
T ss_pred EecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCc--ceEEEecccccccccCCHHHHHHHhCCC
Confidence 99999997643322211 11234578999999999999999999999985 99998 899999998764433334
Q ss_pred cccc
Q 007715 577 VYFR 580 (592)
Q Consensus 577 ~~f~ 580 (592)
.||+
T Consensus 410 g~~~ 413 (547)
T PRK06087 410 GWYY 413 (547)
T ss_pred CCcC
Confidence 4554
|
|
| >PRK05605 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=399.15 Aligned_cols=378 Identities=20% Similarity=0.214 Sum_probs=285.9
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 42 ~~~~p~~~a~~~~~~--------~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~ 113 (573)
T PRK05605 42 VARFGDRPALDFFGA--------TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHN 113 (573)
T ss_pred HHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecC
Confidence 378999999999766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCc-EEEEcCCCC-CC-------------------CC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGN-DV-------------------GI 323 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~-~~-------------------~~ 323 (592)
|.++.+++.+++++++++++|+++... .....+.+..... ++.+..... .. ..
T Consensus 114 ~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
T PRK05605 114 PLYTAHELEHPFEDHGARVAIVWDKVA------PTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALT 187 (573)
T ss_pred cCCCHHHHHHHHhccCCcEEEechhhH------HHHHhhhhccccceeEeeecccccccccccccccccccccccccccc
Confidence 999999999999999999999987532 1111111111111 111110000 00 00
Q ss_pred CCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC-C-CCCCEEE
Q 007715 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-L-KVGDVYC 401 (592)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~-~~~d~~l 401 (592)
....+...|+++....... ...........++++++++|||||||.||||+++|+++...+......+. + ..+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 266 (573)
T PRK05605 188 GPAPGTVPWETLVDAAIGG-DGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVL 266 (573)
T ss_pred cCCCcceeHHHHhhccccc-cccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEE
Confidence 0011334566554432110 00001122345789999999999999999999999998776654433222 2 3468999
Q ss_pred Eecccchhchh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEec
Q 007715 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (592)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gG 480 (592)
+..|+.|..+. ..++.++..|+++++.+ ..++..+++.|+++++|++.++|++++.|.+.......++++||.+++||
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg 345 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLLP-APDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGA 345 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECC
Confidence 99999988876 45677899999999986 56889999999999999999999999999987655556788999999999
Q ss_pred CCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCC--CCCCCCCCCcceeEEE
Q 007715 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC--GVPYPDDQPCVGEVGL 558 (592)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~--g~~vp~G~~giGel~v 558 (592)
+++++++.+++...++ .++++.||+||+++.+...........+++|+|++|+.++|+|++ +++++.|+. |||++
T Consensus 346 ~~l~~~~~~~~~~~~~-~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~--Gel~v 422 (573)
T PRK05605 346 MALPVSTVELWEKLTG-GLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEE--GELLV 422 (573)
T ss_pred CcCCHHHHHHHHHHhC-CCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCe--eEEEE
Confidence 9999999888876654 789999999999865444332233446799999999999999965 589999985 99999
Q ss_pred -----ecccCCCchhhccccccccccccC
Q 007715 559 -----FPLYLGASDRLLNADHEEVYFRGM 582 (592)
Q Consensus 559 -----~~gY~~~~~~~~~~~~~~~~f~~~ 582 (592)
+.||+++++.+......+||-++|
T Consensus 423 ~~~~~~~gy~~~~~~~~~~~~~g~~~TGD 451 (573)
T PRK05605 423 RGPQVFKGYWNRPEETAKSFLDGWFRTGD 451 (573)
T ss_pred ecCchhhhhcCChhHhhhcccCCCcccCC
Confidence 789999998774443333333444
|
|
| >PRK05857 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-45 Score=399.17 Aligned_cols=368 Identities=14% Similarity=0.129 Sum_probs=274.1
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+|+++|+++|+++.++ .+.+||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 23 ~a~~~p~~~a~~~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 23 QARQQPEAIALRRCDG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMA 96 (540)
T ss_pred HHhhCCCcEEEeecCC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEec
Confidence 3478999999986443 13799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
++.++.+++.++++.++++++++++....... .+.+.... ..+.+...... . . +.+.....
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------~-~-~~~~~~~~--- 158 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGSKMASS------AVPEALHSIPVIAVDIAAVT-------R-E-SEHSLDAA--- 158 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccchhccc------cccccccccceeEeeccccc-------c-c-cccccccc---
Confidence 99999999999999999999999986421111 11111111 11222111000 0 0 00000000
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhh----hhcCCCCCCEEEEecccchhchhHHHHHH
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW----AHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (592)
.........+++++|++|||||||.||||+++|+++.+...... ..++...+++++...|++|+.+++..+.+
T Consensus 159 ---~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~ 235 (540)
T PRK05857 159 ---SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTC 235 (540)
T ss_pred ---ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHH
Confidence 00111234568999999999999999999999999876543221 22456678899999999999999888899
Q ss_pred HHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCC
Q 007715 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (592)
Q Consensus 419 L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~ 498 (592)
++.|+++++. ..++..++++|++++||++.++|++++.|.+.......+++++|.+++||++++....+++ ..+ +.
T Consensus 236 l~~G~~~v~~--~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~-~~~-g~ 311 (540)
T PRK05857 236 LMHGGLCVTG--GENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFI-EAT-GV 311 (540)
T ss_pred hhcceeEEec--CCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHH-HHh-CC
Confidence 9999998763 3467889999999999999999999999987655455678999999999999987776544 344 48
Q ss_pred ceeccccchhcccccccCCcCC----CCccCcccccCCCceEEEECCCCC-CC-----CCCCCcceeEEE-----ecccC
Q 007715 499 AIIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGV-PY-----PDDQPCVGEVGL-----FPLYL 563 (592)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~v~IlD~~g~-~v-----p~G~~giGel~v-----~~gY~ 563 (592)
++++.||+||++...+...... ..+.+++|+|++|++++|+|++++ ++ |.|+ +|||+| +.||+
T Consensus 312 ~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~--~Gel~v~g~~~~~GY~ 389 (540)
T PRK05857 312 RTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSAS--FGTLWIKSPANMLGYW 389 (540)
T ss_pred eeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCC--cceEEEeCcchhhhhh
Confidence 8999999999975333221111 124578999999999999998776 33 3466 599999 68999
Q ss_pred CCchhhccccccccccccCcCC
Q 007715 564 GASDRLLNADHEEVYFRGMPMY 585 (592)
Q Consensus 564 ~~~~~~~~~~~~~~~f~~~~~~ 585 (592)
++++.+......+||.++|-++
T Consensus 390 ~~~~~t~~~~~~g~~~TGDlg~ 411 (540)
T PRK05857 390 NNPERTAEVLIDGWVNTGDLLE 411 (540)
T ss_pred CCccchhhhcCCCceeccceEE
Confidence 9999874444344444555444
|
|
| >PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=394.98 Aligned_cols=368 Identities=18% Similarity=0.187 Sum_probs=287.0
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+||++|+++.+. .+||+||.++++++|+.|.+. +++|++|+|+++|++++++++|||+++|++++|++
T Consensus 31 a~~~p~~~a~~~~~~--------~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl~ 102 (542)
T PRK06155 31 AERYPDRPLLVFGGT--------RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPIN 102 (542)
T ss_pred HHHCCCCeEEEeCCc--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEec
Confidence 488999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcC-C-CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+.++.+++..+++++++++++++..... ......... . ...+.+..... . .....|..... ...
T Consensus 103 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~-~~~- 168 (542)
T PRK06155 103 TALRGPQLEHILRNSGARLLVVEAALLA------ALEAADPGDLPLPAVWLLDAPAS-V-----SVPAGWSTAPL-PPL- 168 (542)
T ss_pred cccCHHHHHHHHHhcCceEEEEChhhHH------HHHHhcccccCcceEEEecCccc-c-----ccccccchhhh-ccc-
Confidence 9999999999999999999999875421 111111111 1 12222221110 0 00011111100 000
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcC
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (592)
..........++++++|+|||||||.||||+++|+++.+........+++++++++++..|++|..++..++.+++.|
T Consensus 169 --~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G 246 (542)
T PRK06155 169 --DAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFFQALLAG 246 (542)
T ss_pred --CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcC
Confidence 001112234568999999999999999999999999987776666778899999999999999999988889999999
Q ss_pred CEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceec
Q 007715 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (592)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (592)
+++++.+ ..++..+++.|+++++|++.++|+++..|.+.........+++|.++.|| +++.+..++.+.++ .+++|
T Consensus 247 ~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~~-~~v~~ 322 (542)
T PRK06155 247 ATYVLEP-RFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERFG-VDLLD 322 (542)
T ss_pred ceEEeeC-CCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHcC-CCEEe
Confidence 9999876 56789999999999999999999999999877655555577899887666 46778888877764 78999
Q ss_pred cccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE--------ecccCCCchhhccccc
Q 007715 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL--------FPLYLGASDRLLNADH 574 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v--------~~gY~~~~~~~~~~~~ 574 (592)
.||+||++.++... ......+++|+|+++++++|+|++++++|.|+. |||++ +.||+++++.+.....
T Consensus 323 ~YG~tE~~~~~~~~--~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gei~v~~~~~~~~~~GY~~~~~~~~~~~~ 398 (542)
T PRK06155 323 GYGSTETNFVIAVT--HGSQRPGSMGRLAPGFEARVVDEHDQELPDGEP--GELLLRADEPFAFATGYFGMPEKTVEAWR 398 (542)
T ss_pred eecccccCccccCC--CCCCCCCCcCccCCCceEEEECCCCCCCCCCCc--eEEEEecCCccccchhhcCCHHHHHHhhc
Confidence 99999998654332 123456789999999999999999999999984 99987 4799999988755443
Q ss_pred cccccccCcCC
Q 007715 575 EEVYFRGMPMY 585 (592)
Q Consensus 575 ~~~~f~~~~~~ 585 (592)
..||.++|-++
T Consensus 399 ~~~~~TGD~~~ 409 (542)
T PRK06155 399 NLWFHTGDRVV 409 (542)
T ss_pred CCcEeccceEE
Confidence 45555665443
|
|
| >PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=401.82 Aligned_cols=356 Identities=17% Similarity=0.106 Sum_probs=264.6
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
++++|+++|+++.+. +.++++||+||.++++++|++|.++ ++||+|+|+++|++++++++|||+++|++++ +++
T Consensus 12 ~~~~~~~~a~~~~~~----~~~~~~ty~el~~~~~~lA~~L~~~-~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~-~~~ 85 (525)
T PRK05851 12 MTASGRDLVVLDRES----GLWRRHPWPEVHGRAENVAARLLDR-DRPGAVGLVGEPTVELVAAIQGAWLAGAAVS-ILP 85 (525)
T ss_pred hcCCCCceEEeCCCC----CcceeecHHHHHHHHHHHHHHHHhc-CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCc-CCC
Confidence 478999999998753 2467999999999999999999987 8999999999999999999999999999865 444
Q ss_pred C--------CCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhc
Q 007715 266 S--------FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (592)
Q Consensus 266 ~--------~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (592)
. ...+++.+++++++++++|+++... ..+.+... . +.+. .+.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~~-~-~~~~---------------~~~~~~~ 139 (525)
T PRK05851 86 GPVRGADDGRWADATLTRFAGIGVRTVLSHGSHL---------ERLRAVDS-S-VTVH---------------DLATAAH 139 (525)
T ss_pred CCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHH---------HHHHHhhc-c-cccc---------------ccccccc
Confidence 2 2345666789999999999986531 11111000 0 0000 0000000
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCC-CCCEEEEecccchhchhHHHH
Q 007715 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK-VGDVYCWPTNLGWVMGPVILF 416 (592)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~ 416 (592)
.. . .. ......++++|||+|||||||+||||+++|+++++.+.+....++++ ++|++++..|++|+++++.++
T Consensus 140 ~~-~---~~--~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 213 (525)
T PRK05851 140 TN-R---SA--SLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAFLL 213 (525)
T ss_pred cc-c---cc--cCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHHHH
Confidence 00 0 00 01123568999999999999999999999999998888777788888 899999999999999998889
Q ss_pred HHHHcCCEEEEeCC-CC--ChhhHHHHHHHhCCcEEEccHHHHHHHHhcC-cCCCCCCccccEEEEecCCCChhhHHHHH
Q 007715 417 SSFLNGATLALYQG-SP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTN-CLEGLDWTKIRSFASTGETSNVDDDLWLS 492 (592)
Q Consensus 417 ~~L~~G~~lvl~~~-~~--~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~-~~~~~~l~sLr~v~~gGe~l~~~~~~~~~ 492 (592)
.+++.|+++++.+. .+ ++..+++.|+++++|++..+|.++..+.+.. .....++++||.+++||+++++++.+++.
T Consensus 214 ~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~ 293 (525)
T PRK05851 214 TAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFA 293 (525)
T ss_pred HHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHH
Confidence 99999999999763 22 5678999999999998866555555554322 12344578999999999999999988877
Q ss_pred Hhc---c--CCceeccccchhcccccccCCcC--------------CCCccCcccccCCCceEEEECCCC-CCCCCCCCc
Q 007715 493 SKA---W--YNAIIESCGGTELSSAYIQGSLL--------------QPQAFGAFSTATMTAGLVILDECG-VPYPDDQPC 552 (592)
Q Consensus 493 ~~~---~--~~~l~n~YG~TE~~~~~~~~~~~--------------~~~~~~~iG~p~~~~~v~IlD~~g-~~vp~G~~g 552 (592)
+.+ + ..+++|.||+||++..++..... ...+.+++|+|++|++++|+|+++ .++|.|+.
T Consensus 294 ~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~- 372 (525)
T PRK05851 294 TAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREI- 372 (525)
T ss_pred HHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCe-
Confidence 642 2 23599999999997544332111 012346899999999999999776 46999984
Q ss_pred ceeEEE-----ecccCCCchhhccccccccccccCcCC
Q 007715 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY 585 (592)
Q Consensus 553 iGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~ 585 (592)
|||+| +.||+++|+.. ...||.++|-++
T Consensus 373 -GEl~v~g~~~~~GY~~~~~~~----~~~~~~TGDl~~ 405 (525)
T PRK05851 373 -GEIEIRGASMMSGYLGQAPID----PDDWFPTGDLGY 405 (525)
T ss_pred -EEEEEecCchhhccccCCccC----CCCceeccceEE
Confidence 99999 78999998742 123444555443
|
|
| >PLN03051 acyl-activating enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=391.65 Aligned_cols=327 Identities=70% Similarity=1.168 Sum_probs=240.2
Q ss_pred cCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCC
Q 007715 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (592)
Q Consensus 240 ~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 319 (592)
++|++++++++|||+++|+++||+++.++.+++.+++++++++++|+++.+....+..+....+........+++...+.
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 68999999999999999999999999999999999999999999999875422112222222222222223333322111
Q ss_pred CCCCCCccCcccHHHhhccCCCCC--CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCC
Q 007715 320 DVGIPLREQDLSWKDFLSSVDYHP--RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (592)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (592)
............|+++........ ...........++++++|+|||||||+||||+++|++++.........++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 000000012235666553211100 000111112356899999999999999999999999987665555556788899
Q ss_pred CEEEEecccchhchhHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccE
Q 007715 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRS 475 (592)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~ 475 (592)
|++++.+|++|+.+++.++.+|+.|+++++.++.+++..+++.|+++++|++.++|+++..|++... ....++++||.
T Consensus 161 d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~ 240 (499)
T PLN03051 161 DVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRV 240 (499)
T ss_pred CEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheE
Confidence 9999999999999988888999999999998755677899999999999999999999999987543 33456889999
Q ss_pred EEEecCCCChhhHHHHHHhcc-CCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcce
Q 007715 476 FASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVG 554 (592)
Q Consensus 476 v~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giG 554 (592)
+++|||++++++.+++.+..+ +++++|.||+||++..++..........+++|+|++|++++|+|++|+++|.|+..+|
T Consensus 241 i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~~~~G 320 (499)
T PLN03051 241 FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYPDDQPCVG 320 (499)
T ss_pred EEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCCCCCCcce
Confidence 999999999998887766332 3679999999998653333222233456789999999999999999999999842259
Q ss_pred eEEEe-------cccCCCc
Q 007715 555 EVGLF-------PLYLGAS 566 (592)
Q Consensus 555 el~v~-------~gY~~~~ 566 (592)
||+|. .||+|++
T Consensus 321 el~v~g~~~~~~~gy~~~~ 339 (499)
T PLN03051 321 EVALAPPMLGASDRLLNAD 339 (499)
T ss_pred EEEEecCcCCCCccccCCc
Confidence 99992 4777654
|
|
| >PRK07470 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=396.14 Aligned_cols=363 Identities=20% Similarity=0.203 Sum_probs=283.5
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+. .+||+||.++++++|+.|++. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 17 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 88 (528)
T PRK07470 17 ARRFPDRIALVWGDR--------SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTN 88 (528)
T ss_pred HHHCCCceEEEECCc--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecC
Confidence 378999999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+.++.+++.+++++++++++++++.+.+ ....+.+.... .++.+.. . .....++++......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~- 152 (528)
T PRK07470 89 FRQTPDEVAYLAEASGARAMICHADFPE------HAAAVRAASPDLTHVVAIGG--A-------RAGLDYEALVARHLG- 152 (528)
T ss_pred ccCCHHHHHHHHHhcCceEEEEcchhHH------HHHHHHhhCCcCceEEEeCC--C-------cccccHHHHHhcCCC-
Confidence 9999999999999999999999976421 11222221211 1222211 0 012345555443211
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhh-c-CCCCCCEEEEecccchhchhHHHHHHHH
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-I-DLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~-~-~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (592)
.........++++++|+|||||||.||||+++|+++...+...... + +.+++|+++...|++|+.++..+ ..++
T Consensus 153 ---~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~-~~~~ 228 (528)
T PRK07470 153 ---ARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQL-CQVA 228 (528)
T ss_pred ---CCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHH-HHHh
Confidence 1112234567899999999999999999999999986544432222 2 46788999999999999888655 4678
Q ss_pred cCCEEEEeCC-CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCc
Q 007715 421 NGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (592)
Q Consensus 421 ~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (592)
.|++.++.+. ..++..+++.|+++++|++.++|++++.+.+.......+++++|.+++||++++..+..++...++ .+
T Consensus 229 ~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~ 307 (528)
T PRK07470 229 RGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLG-KV 307 (528)
T ss_pred cCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhC-cH
Confidence 8888887763 457889999999999999999999999998776545567889999999999999998888877665 67
Q ss_pred eeccccchhcccccccCCcC-------CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCch
Q 007715 500 IIESCGGTELSSAYIQGSLL-------QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASD 567 (592)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-------~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~ 567 (592)
++|.||+||++..+...... .....+++|+|++|++++|+|++|++++.|+. |||++ +.||+++++
T Consensus 308 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~i~~~~~~~gy~~~~~ 385 (528)
T PRK07470 308 LVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGET--GEICVIGPAVFAGYYNNPE 385 (528)
T ss_pred HHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCc--eEEEEeCCccchhhcCCHH
Confidence 99999999997654332211 12245789999999999999999999999994 99999 789999998
Q ss_pred hhccccccccccc
Q 007715 568 RLLNADHEEVYFR 580 (592)
Q Consensus 568 ~~~~~~~~~~~f~ 580 (592)
.+... +.+.||.
T Consensus 386 ~~~~~-~~~~~~~ 397 (528)
T PRK07470 386 ANAKA-FRDGWFR 397 (528)
T ss_pred HHHhh-hcCCcEe
Confidence 76333 3334443
|
|
| >TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=392.02 Aligned_cols=343 Identities=18% Similarity=0.211 Sum_probs=282.9
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+|+++|+.+.+. .+||+||.++++++|+.|.+. +++||+|+|+++|+.++++++|||+++|++++|++
T Consensus 10 a~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 81 (502)
T TIGR01734 10 AETYPQTIAYRYQGQ--------ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVD 81 (502)
T ss_pred HHHCCCceEEEcCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCC
Confidence 367899999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+.++.+++.++++.++++++++++...... .....+.+. ....+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~------------~~~~~~~~~---------------~~~~~~~~~~~--- 131 (502)
T TIGR01734 82 TSIPSERIEMIIEAAGPELVIHTAELSIDA------------VGTQIITLS---------------ALEQAETSGGP--- 131 (502)
T ss_pred CcChHHHHHHHHHhcCCCEEEecccccccc------------cCCceEEch---------------HhhhhhhhcCC---
Confidence 999999999999999999999987532100 000111110 01111111100
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCE
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (592)
........++++++++|||||||.||||+++|+++...+.+....+++..+++++...|++|+.+++.++.++..|++
T Consensus 132 --~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~ 209 (502)
T TIGR01734 132 --VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGT 209 (502)
T ss_pred --ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCCCE
Confidence 011123456889999999999999999999999999888887777888999999999999999999889999999999
Q ss_pred EEEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceec
Q 007715 425 LALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (592)
Q Consensus 425 lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (592)
+++.+.. .++..+++.++++++|.+..+|+++..+..........++++|.++++|++++.++.+++.+.++++++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 289 (502)
T TIGR01734 210 LHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYN 289 (502)
T ss_pred EEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEe
Confidence 9998743 37788999999999999999999998877654444556789999999999999999999999888889999
Q ss_pred cccchhcccccccCCc----CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhc
Q 007715 503 SCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLL 570 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~ 570 (592)
.||+||++.+++.... .......++|+|++|++++|+|++++++|+|+ +|||++ ++||+++++.+.
T Consensus 290 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~--~Gel~v~g~~~~~gy~~~~~~~~ 364 (502)
T TIGR01734 290 TYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGE--KGEIVIVGPSVSKGYLNNPEKTA 364 (502)
T ss_pred CccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCC--eeEEEEccccccccccCCcccch
Confidence 9999998754332211 12233468999999999999999999999998 599999 789999998763
|
This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides. |
| >PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-44 Score=390.28 Aligned_cols=374 Identities=17% Similarity=0.168 Sum_probs=284.7
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+. .+.++.+||+||.++++++|+.|.++ +++||+|+++++|++++++++|||+++|++++|++
T Consensus 17 a~~~p~~~a~~~~~~---~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 17 ADVYGHKTALIFESS---GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPIN 93 (517)
T ss_pred HHHCCCceEEEcccC---CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcC
Confidence 378999999998653 23446899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcC---CCcEEEEcCCCCCCCCCCccCcccHHHhhccCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (592)
|.++.+++.+++++++++++++++... +.+.++.+.. ...+++...... ...+...++++......
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 162 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFY------PMYRQIQQEDATPLRHICLTRVALP-----ADDGVSSFTQLKAQQPA 162 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchh------HHHHHHHhhccccCcEEEEecCCCc-----ccccccCHHHHhccCCc
Confidence 999999999999999999999988532 2223332211 112222222110 01123345554332221
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHH
Q 007715 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (592)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (592)
.........++++++|+|||||||.||||+++|+++............+.+++++++..|+.|..+. ..++.++.
T Consensus 163 ----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 238 (517)
T PRK08008 163 ----TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFS 238 (517)
T ss_pred ----cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHh
Confidence 0011123456899999999999999999999999987554333334457889999999998887554 56788899
Q ss_pred cCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 421 ~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
.|+++++.+ ..++..+++.|+++++|++.++|++++.+............+++.+.+++ +++.+...++.+.++ +++
T Consensus 239 ~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~~ 315 (517)
T PRK08008 239 AGATFVLLE-KYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERFG-VRL 315 (517)
T ss_pred cCcEEEEcc-ccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHhC-CeE
Confidence 999999987 56888999999999999999999999998866543333356788877754 678888877776654 889
Q ss_pred eccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE--------ecccCCCchhhccc
Q 007715 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL--------FPLYLGASDRLLNA 572 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v--------~~gY~~~~~~~~~~ 572 (592)
+|.||+||++..++...........++|+|++|++++|+|++|++++.|+. |||++ ++||+++|+.+...
T Consensus 316 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~~~~gy~~~~~~~~~~ 393 (517)
T PRK08008 316 LTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEI--GEICIKGVPGKTIFKEYYLDPKATAKV 393 (517)
T ss_pred EeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCCc--ceEEEeCCCCcchhhhHhCChHHHhhc
Confidence 999999999865444333333455789999999999999999999999995 99997 45999999987444
Q ss_pred ccccccc-ccC
Q 007715 573 DHEEVYF-RGM 582 (592)
Q Consensus 573 ~~~~~~f-~~~ 582 (592)
...+.|| +||
T Consensus 394 ~~~~g~~~TGD 404 (517)
T PRK08008 394 LEADGWLHTGD 404 (517)
T ss_pred ccCCCCeeccc
Confidence 4333444 444
|
|
| >PRK07008 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-44 Score=391.42 Aligned_cols=377 Identities=18% Similarity=0.179 Sum_probs=284.8
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
..+|+++++.+... +..+.+||.||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 21 ~~~~~~~~~~~~~~----~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 96 (539)
T PRK07008 21 RHAGDTEIVSRRVE----GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINP 96 (539)
T ss_pred hhCCCceEEEeecc----CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccc
Confidence 67788888775321 1235899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCc-E-EEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-A-IVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
.++.+++.++++++++++++++..+. +....+....+.. . +.+..... .... .....+++++......
T Consensus 97 ~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~~~~~-- 166 (539)
T PRK07008 97 RLFPEQIAYIVNHAEDRYVLFDLTFL------PLVDALAPQCPNVKGWVAMTDAAH-LPAG-STPLLCYETLVGAQDG-- 166 (539)
T ss_pred ccCHHHHHHHHhccCCcEEEEcchhH------HHHHHHHhhCCCceEEEEEccCCc-cccC-CcccccHHHHhcccCC--
Confidence 99999999999999999999987542 1222222222221 1 22221111 0000 1123456666543221
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHH--HHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHc
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT--AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (592)
........++++++++|||||||.||||+++|++++... ......+++.++|+++...|++|..+...++.++..
T Consensus 167 ---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~ 243 (539)
T PRK07008 167 ---DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLT 243 (539)
T ss_pred ---CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhc
Confidence 111123456889999999999999999999999976432 233346778899999999999887776556788999
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|+++++.+...++..+++.+++++||++..+|+++..|.+.......++++||.+++||+++++++.+++...++ .+++
T Consensus 244 G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~l~ 322 (539)
T PRK07008 244 GAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEYG-VEVI 322 (539)
T ss_pred CceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHhC-Ccee
Confidence 999999866678899999999999999999999999998765555567889999999999999999999887764 8899
Q ss_pred ccccchhcccccccCCcC------CC----CccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCc
Q 007715 502 ESCGGTELSSAYIQGSLL------QP----QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGAS 566 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~------~~----~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~ 566 (592)
+.||+||++...+..... .. ....++|+|+||++++|+|++++++|.+...+|||++ +.||++++
T Consensus 323 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~ 402 (539)
T PRK07008 323 HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWDGKAFGDLQVRGPWVIDRYFRGD 402 (539)
T ss_pred cccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCCCCcceEEEEeCCccchhhcCCh
Confidence 999999998543322110 00 1236899999999999999999999865312599999 68999998
Q ss_pred hhhccccccccccccCcC
Q 007715 567 DRLLNADHEEVYFRGMPM 584 (592)
Q Consensus 567 ~~~~~~~~~~~~f~~~~~ 584 (592)
+..+ ..+||.++|-+
T Consensus 403 ~~~~---~~g~~~TGD~~ 417 (539)
T PRK07008 403 ASPL---VDGWFPTGDVA 417 (539)
T ss_pred hhhh---cCCCcccCceE
Confidence 5332 13344455533
|
|
| >PRK07514 malonyl-CoA synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-44 Score=388.13 Aligned_cols=357 Identities=18% Similarity=0.192 Sum_probs=282.8
Q ss_pred CCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC
Q 007715 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (592)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~ 266 (592)
.+|+++|+.+.+. +.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.
T Consensus 14 ~~~~~~a~~~~~~-------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~ 86 (504)
T PRK07514 14 ADRDAPFIETPDG-------LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTA 86 (504)
T ss_pred hCCCCeEEEeCCC-------CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCC
Confidence 7899999987444 2899999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCc-EEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCC
Q 007715 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (592)
Q Consensus 267 ~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (592)
++.+++..++++++++++++++... .....+....... .+.+... ....+.+......
T Consensus 87 ~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----- 145 (504)
T PRK07514 87 YTLAELDYFIGDAEPALVVCDPANF------AWLSKIAAAAGAPHVETLDAD----------GTGSLLEAAAAAP----- 145 (504)
T ss_pred CCHHHHHHHHHhCCCcEEEEccchh------HHHHHhhhccCCceEEEecCC----------CcccHHHhhhhcC-----
Confidence 9999999999999999999987532 1122222211111 2222110 0111222211111
Q ss_pred CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCE
Q 007715 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (592)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (592)
.........+++++||+|||||||.||||+++|+++...+......++++++|++++..|+.|..++ +.++.+++.|++
T Consensus 146 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 146 DDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 1122234457899999999999999999999999999888777777889999999999999998876 467789999999
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 425 lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
+++.+ ..++..+++.+ .++|++..+|+++..++.........++++|.+++||+++++++.+++...++ .+++|.|
T Consensus 226 ~~~~~-~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~~Y 301 (504)
T PRK07514 226 MIFLP-KFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTG-HAILERY 301 (504)
T ss_pred EEECC-CCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhC-Ccceeec
Confidence 99986 46788888888 47999999999999998775555566889999999999999999998887764 6899999
Q ss_pred cchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccccc
Q 007715 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (592)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~ 578 (592)
|+||++..... .........++|+|++|++++|+| ++++++|.|++ |||+| +.||+++++.+......+.|
T Consensus 302 G~tE~~~~~~~-~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~--Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~ 378 (504)
T PRK07514 302 GMTETNMNTSN-PYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEI--GMIEVKGPNVFKGYWRMPEKTAEEFRADGF 378 (504)
T ss_pred ccccccccccC-CccccccCcccccCCCCcEEEEEECCCCCCCCCCCc--eEEEEecCCccccccCCchhhhhhcccCCC
Confidence 99998754322 222233457899999999999999 89999999985 99998 78999999876433332334
Q ss_pred c
Q 007715 579 F 579 (592)
Q Consensus 579 f 579 (592)
|
T Consensus 379 ~ 379 (504)
T PRK07514 379 F 379 (504)
T ss_pred e
Confidence 4
|
|
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-45 Score=410.11 Aligned_cols=348 Identities=18% Similarity=0.229 Sum_probs=267.3
Q ss_pred CCCCCC-ceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDN-TVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd-~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++|+ ++|+.+.+. +.+||+||.++++++|++|++.+++||+|+|+++|++++++++|||+++|++++|++
T Consensus 214 ~~~~p~~~~a~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~ 286 (718)
T PRK08043 214 QYRYGAGKPCIEDVNF-------TPDSYRKLLKKTLFVGRILEKYSVEGERIGLMLPNATISAAVIFGASLRRRIPAMMN 286 (718)
T ss_pred HHHhCCCCcceEcCCC-------CcccHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCcHHHHHHHHHHHHcCCcccccc
Confidence 478897 688875331 289999999999999999976689999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHh--h-ccCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDF--L-SSVD 340 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 340 (592)
+.++.+++++++++++++++|+++++....+... +....+. ..+++.... ....+.+. . ....
T Consensus 287 ~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~~ 353 (718)
T PRK08043 287 YTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH----LPEQLTQVRWVYLEDLK---------DDVTTADKLWIFAHLL 353 (718)
T ss_pred cCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCC----hhhhhccccEEEhhhhh---------hhcchhHHHHHHHHHh
Confidence 9999999999999999999999876432111000 1111111 112211100 00011110 0 0000
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHH
Q 007715 341 YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (592)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (592)
. + ........++|+|+|+|||||||.||||+++|+++.+.+.+....++++++|++++..|++|..+. ..++.+|
T Consensus 354 ~---~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l 429 (718)
T PRK08043 354 M---P-RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTPL 429 (718)
T ss_pred C---C-ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHHH
Confidence 0 0 001123457899999999999999999999999998888777777889999999999999999887 5578999
Q ss_pred HcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCc
Q 007715 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (592)
Q Consensus 420 ~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (592)
..|+++++.+...++..+.+.|+++++|++..+|+++..+.+.. ...++++||.+++||+++++++.+++...++ ++
T Consensus 430 ~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g-~~ 506 (718)
T PRK08043 430 LTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKFG-LR 506 (718)
T ss_pred HcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHcC-CC
Confidence 99999999875456677889999999999999999998886542 2346789999999999999999998887764 78
Q ss_pred eeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCC--Cch
Q 007715 500 IIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLG--ASD 567 (592)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~--~~~ 567 (592)
++|.||+||++..++...+ ...+.+++|+|+||++++|+|+++. |+ .|||++ +.||++ +|+
T Consensus 507 l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~~~i~d~~~~----~~--~Gel~v~g~~v~~GY~~~e~~~ 574 (718)
T PRK08043 507 ILEGYGVTECAPVVSINVP-MAAKPGTVGRILPGMDARLLSVPGI----EQ--GGRLQLKGPNIMNGYLRVEKPG 574 (718)
T ss_pred eecccCcccccceEEecCC-cccCCCCCCCcCCCCeeEEecCCCC----CC--ceEEEEecCCccccccCCCCcc
Confidence 9999999999765443222 2345689999999999999997663 44 399998 789998 455
|
|
| >PRK09088 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-44 Score=387.11 Aligned_cols=352 Identities=18% Similarity=0.183 Sum_probs=277.2
Q ss_pred CCCCCCceEEEE--eccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 007715 186 RRKEDNTVAIVW--REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (592)
Q Consensus 186 a~~~pd~~Al~~--~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vp 262 (592)
++.+||++|+.+ .+. .+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|
T Consensus 5 a~~~p~~~a~~~~~~~~--------~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 76 (488)
T PRK09088 5 ARLQPQRLAAVDLALGR--------RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVP 76 (488)
T ss_pred hhhCCCceEEEecCCCc--------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEe
Confidence 478899999986 333 899999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 263 ld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+++..+.+++.+++++++++++++++...... . ....++++......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~----------------~----------------~~~~~~~~~~~~~~- 123 (488)
T PRK09088 77 LNWRLSASELDALLQDAEPRLLLGDDAVAAGR----------------T----------------DVEDLAAFIASADA- 123 (488)
T ss_pred eCccCCHHHHHHHHHhCCCCEEEEcchhhccc----------------c----------------cccchhhhhhhccc-
Confidence 99999999999999999999999987532100 0 00112222211111
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhH-HHHHHHHc
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLN 421 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~ 421 (592)
. .........++++++++|||||||+||+|+++|+++...+........+..+|++++..|+.|..++. .++.++..
T Consensus 124 -~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~ 201 (488)
T PRK09088 124 -L-EPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAV 201 (488)
T ss_pred -c-ccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhc
Confidence 0 00111233568899999999999999999999999987776666666788899999999999998874 46678889
Q ss_pred CCEEEEeCCCCChhhHHHHHH--HhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCc
Q 007715 422 GATLALYQGSPLERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~--~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (592)
|+++++.+ ..++..++..+. ++++|++..+|+++..+.+........+++||.+++||++++......+... +++
T Consensus 202 g~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~ 278 (488)
T PRK09088 202 GGSILVSN-GFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIP 278 (488)
T ss_pred CCEEEEcC-CCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCc
Confidence 99998875 457777888776 4899999999999999987654444567899999999999998887766654 578
Q ss_pred eeccccchhcccccccCCc--CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccc
Q 007715 500 IIESCGGTELSSAYIQGSL--LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNA 572 (592)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~ 572 (592)
+++.||+||++..+..... ....+.+++|+|+++++++|+|+++++++.|++ |||+| +.||+++++.+...
T Consensus 279 v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gY~~~~~~~~~~ 356 (488)
T PRK09088 279 MVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVP--GELLLRGPNLSPGYWRRPQATARA 356 (488)
T ss_pred eeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCc--eEEEEECCccchhhcCChhhhhhh
Confidence 9999999999864322111 112355789999999999999999999999995 99999 78999999876443
Q ss_pred ccc-ccccccCcCC
Q 007715 573 DHE-EVYFRGMPMY 585 (592)
Q Consensus 573 ~~~-~~~f~~~~~~ 585 (592)
... .||.++|-++
T Consensus 357 ~~~~g~~~TGDl~~ 370 (488)
T PRK09088 357 FTGDGWFRTGDIAR 370 (488)
T ss_pred hcCCCCeeecceEE
Confidence 332 3444555443
|
|
| >PRK05852 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-44 Score=391.49 Aligned_cols=375 Identities=19% Similarity=0.182 Sum_probs=279.2
Q ss_pred hhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHh
Q 007715 178 CCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILA 256 (592)
Q Consensus 178 ~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~ 256 (592)
..+.+++ +++||++|+++.+. .+.+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++
T Consensus 20 ~~l~~~a--~~~p~~~ai~~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~ 91 (534)
T PRK05852 20 DLVEVAA--TRLPEAPALVVTAD------RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRA 91 (534)
T ss_pred HHHHHHH--HhCCCCcEEEecCC------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence 3444433 78999999987543 13799999999999999999999 999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhh
Q 007715 257 GYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFL 336 (592)
Q Consensus 257 Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 336 (592)
|++++|++|.++.+++.+++++++++++|+++....... ..... .....+.+...... ..+.... ...
T Consensus 92 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~-----~~~~~~~-~~~ 159 (534)
T PRK05852 92 DLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRA-----EPTTR-WWPLTVNVGGDSGP-----SGGTLSV-HLD 159 (534)
T ss_pred CcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhc-----ccccc-ccceeeeecccccc-----ccccccc-ccc
Confidence 999999999999999999999999999999864221000 00000 00111111110000 0000000 000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhH-HH
Q 007715 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-IL 415 (592)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~ 415 (592)
..... .. ........++++++|+|||||||.||||+++|+++.+.+......+++.++|++++..|++|..+++ .+
T Consensus 160 ~~~~~--~~-~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 236 (534)
T PRK05852 160 AATEP--TP-ATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAAL 236 (534)
T ss_pred cccCC--Cc-cccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHH
Confidence 00000 00 0001112246789999999999999999999999988888777788899999999999999998884 57
Q ss_pred HHHHHcCCEEEEeCC-CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC--CCCCCccccEEEEecCCCChhhHHHHH
Q 007715 416 FSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLS 492 (592)
Q Consensus 416 ~~~L~~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~v~~gGe~l~~~~~~~~~ 492 (592)
+.+++.|+++++.+. .+++..+++.|+++++|++.++|+++..|.+.... ...+++++|.++++|+++++++.+++.
T Consensus 237 ~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~ 316 (534)
T PRK05852 237 LATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQ 316 (534)
T ss_pred HHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHH
Confidence 788999999888643 45788999999999999999999999999876432 123468999999999999999999988
Q ss_pred HhccCCceeccccchhcccccccCCcC----CC---CccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ec
Q 007715 493 SKAWYNAIIESCGGTELSSAYIQGSLL----QP---QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FP 560 (592)
Q Consensus 493 ~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~---~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~ 560 (592)
..++ .++++.||+||++..++..... .. ...+..|+ .+|++++|+|++|+++|+|+. |||+| ++
T Consensus 317 ~~~~-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~~g~~~~~g~~--Gel~v~g~~v~~ 392 (534)
T PRK05852 317 TEFA-APVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGSDGLPLPAGAV--GEVWLRGTTVVR 392 (534)
T ss_pred HHhC-CChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECCCCCCCCCCCc--eEEEEecCcccc
Confidence 8775 7899999999998644332211 11 12234444 799999999999999999995 99998 78
Q ss_pred ccCCCchhhccccccccccc
Q 007715 561 LYLGASDRLLNADHEEVYFR 580 (592)
Q Consensus 561 gY~~~~~~~~~~~~~~~~f~ 580 (592)
||+++|+.+... +.+.||.
T Consensus 393 gY~~~~~~t~~~-~~~g~~~ 411 (534)
T PRK05852 393 GYLGDPTITAAN-FTDGWLR 411 (534)
T ss_pred hhcCCcccchhh-hcCCCcc
Confidence 999999987443 3334554
|
|
| >PRK10946 entE enterobactin synthase subunit E; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-44 Score=390.87 Aligned_cols=368 Identities=15% Similarity=0.174 Sum_probs=285.4
Q ss_pred CCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCC
Q 007715 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268 (592)
Q Consensus 190 pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~ 268 (592)
||++|+++.+. .+||+||.++++++|++|.+. +++|++|+++++|++++++++|||+++|++++++++..+
T Consensus 37 p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~ 108 (536)
T PRK10946 37 SDAIAVICGER--------QFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQ 108 (536)
T ss_pred CCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCcccc
Confidence 99999998776 899999999999999999999 999999999999999999999999999998888778888
Q ss_pred HHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCC
Q 007715 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY 347 (592)
Q Consensus 269 ~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (592)
..++..++++++++++++++.... .........+.+..+. ..+++... .+...+.++...... .
T Consensus 109 ~~~~~~~~~~~~~~~li~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-----~ 173 (536)
T PRK10946 109 RSELNAYASQIEPALLIADRQHAL-FSDDDFLNTLVAEHSSLRVVLLLND---------DGEHSLDDAINHPAE-----D 173 (536)
T ss_pred HHHHHHHHhhcCCCEEEEeccccc-cchHHHHHHHHhhCCCceEEEEecC---------CCCccHHHHhhCccc-----c
Confidence 889999999999999999864210 0000111222222222 22222211 112234444433221 1
Q ss_pred CCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhH--HHHHHHHcCCEE
Q 007715 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLNGATL 425 (592)
Q Consensus 348 ~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~L~~G~~l 425 (592)
.......++++++++|||||||.||||+++|+++...+......++++++|++++..|++|..++. .++.+|..|+++
T Consensus 174 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~ 253 (536)
T PRK10946 174 FTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTV 253 (536)
T ss_pred cccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEE
Confidence 112334578999999999999999999999999988888777788899999999999999877753 578899999999
Q ss_pred EEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhc--CcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecc
Q 007715 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (592)
Q Consensus 426 vl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~--~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (592)
++.+ ..++..+++.++++++|++.++|+++..|++. .......+++||.+++||+++++++.+++...++ +++++.
T Consensus 254 ~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g-~~~~~~ 331 (536)
T PRK10946 254 VLAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAELG-CQLQQV 331 (536)
T ss_pred EECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhcC-CeEEEe
Confidence 9875 56788899999999999999999999999865 2223345789999999999999999998877664 899999
Q ss_pred ccchhcccccccCCcCCCCccCcccccC-CCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccc
Q 007715 504 CGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (592)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~ 577 (592)
||+||+++..............++|+|+ +++.++|+|++|++++.|+. |||++ +.||+++++.+.+....+.
T Consensus 332 YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g~~~~~GY~~~~~~t~~~~~~d~ 409 (536)
T PRK10946 332 FGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEV--GRLMTRGPYTFRGYYKSPQHNASAFDANG 409 (536)
T ss_pred ecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCCCc--cEEEEecCccchhhcCCcccchhhcccCC
Confidence 9999976543322212223457899999 89999999999999999995 99998 7899999987755443334
Q ss_pred cc-ccCcC
Q 007715 578 YF-RGMPM 584 (592)
Q Consensus 578 ~f-~~~~~ 584 (592)
|| ++|-+
T Consensus 410 ~~~TGDl~ 417 (536)
T PRK10946 410 FYCSGDLV 417 (536)
T ss_pred ceecCceE
Confidence 44 44433
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-45 Score=432.55 Aligned_cols=366 Identities=18% Similarity=0.205 Sum_probs=284.7
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
++++||++|+++..+ +++||+||.++++++|++|++.+++||+|+++++|++++++++|||+++|++++|++|
T Consensus 625 a~~~p~~~a~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 625 AKRNWSRLAVADSTG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGALANLALLLAGKVPVNLNY 697 (1146)
T ss_pred HHhcCCCcEEEcCCC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeCC
Confidence 478999999986432 2899999999999999999755999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC--CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
..+.+++.+++++++++++++++.+........ .....+ ..++.+...... . .....+.+....... +
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~-~ 767 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLKNKG----FDLELPENVKVIYLEDLKAK----I-SKVDKLTALLAARLL-P 767 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccC----CchhcccCceEEEeehhccc----c-chhHHHHHHHHhccC-C
Confidence 999999999999999999999875421110000 000111 112222110000 0 001112222111100 0
Q ss_pred CC--CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhH-HHHHHHH
Q 007715 344 RP--NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFL 420 (592)
Q Consensus 344 ~~--~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~ 420 (592)
.. .........++|+++|+|||||||+||||+++|+++.+.+.+....++++++|++++..|+.|..+.. .++.+++
T Consensus 768 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 847 (1146)
T PRK08633 768 ARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLL 847 (1146)
T ss_pred HHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHH
Confidence 00 00001234578999999999999999999999999998888777788899999999999999999884 4788999
Q ss_pred cCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 421 ~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
.|+++++.+...++..+++.++++++|++.++|++++.+.+.....+.+++++|.+++|||++++++.+++.+.++ +++
T Consensus 848 ~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g-~~~ 926 (1146)
T PRK08633 848 EGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKFG-IRI 926 (1146)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHhC-CCe
Confidence 9999999876678899999999999999999999999998865555667899999999999999999999988774 889
Q ss_pred eccccchhcccccccCCcC---------CCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCC
Q 007715 501 IESCGGTELSSAYIQGSLL---------QPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGA 565 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~---------~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~ 565 (592)
+|.||+||++..++...+. ...+.+++|+|+||++++|+| ++++++|+|++ |||++ +.||+|+
T Consensus 927 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~gY~~~ 1004 (1146)
T PRK08633 927 LEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGED--GLILIGGPQVMKGYLGD 1004 (1146)
T ss_pred ecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCc--eEEEEcCCCccccccCC
Confidence 9999999997644332211 113467899999999999999 57999999995 99999 7899999
Q ss_pred chhhcc
Q 007715 566 SDRLLN 571 (592)
Q Consensus 566 ~~~~~~ 571 (592)
|+.+..
T Consensus 1005 ~~~t~~ 1010 (1146)
T PRK08633 1005 PEKTAE 1010 (1146)
T ss_pred ccchHH
Confidence 997643
|
|
| >PRK07059 Long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-44 Score=392.41 Aligned_cols=374 Identities=21% Similarity=0.210 Sum_probs=281.8
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ .+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 33 a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~ 104 (557)
T PRK07059 33 FRQYADRPAFICMGK--------AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVN 104 (557)
T ss_pred HHHcCCCceEEEcCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccC
Confidence 378999999999876 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCC-----------------CCCCCc
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGND-----------------VGIPLR 326 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~-----------------~~~~~~ 326 (592)
|.++.+++.+++++++++++++++.+. .....+...... .+++....... ......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (557)
T PRK07059 105 PLYTPRELEHQLKDSGAEAIVVLENFA------TTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSL 178 (557)
T ss_pred cccCHHHHHHHHHccCceEEEEchhhH------HHHHHhhcccCCceeEEecccccccccccccccccccccccccccCC
Confidence 999999999999999999999987542 111111111111 11111100000 000001
Q ss_pred cCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhh----cCCC---CCCE
Q 007715 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH----IDLK---VGDV 399 (592)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~~~---~~d~ 399 (592)
++...+++++..... .........++++|+|+|||||||.||||+++|++++..+...... +... ....
T Consensus 179 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 179 PGHVRFNDALAEGAR----QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred CCcccHHHHhhccCC----CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 122345544433221 1112234567899999999999999999999999987654332211 1111 2346
Q ss_pred EEEecccchhchh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEE
Q 007715 400 YCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (592)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~ 478 (592)
++...|+.|..+. ...+.++..|++.++.+...++..+++.|+++++|.+..+|+++..|.........+++++|.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 7778888887765 456678889999888875557888999999999999999999999998876555566889999999
Q ss_pred ecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE
Q 007715 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (592)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v 558 (592)
||+++++.+.+++...++ +++++.||+||++.+++...........++|+|++|++++|+|++|+++|+|+. |||++
T Consensus 335 gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~~--Gel~v 411 (557)
T PRK07059 335 GGMAVQRPVAERWLEMTG-CPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRDDDGNDLPLGEP--GEICI 411 (557)
T ss_pred ccccCCHHHHHHHHHHhC-CCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEECCCCCCCCCCCc--eEEEE
Confidence 999999999888877664 899999999999865443322222345789999999999999999999999995 99999
Q ss_pred -----ecccCCCchhhccccccccccc
Q 007715 559 -----FPLYLGASDRLLNADHEEVYFR 580 (592)
Q Consensus 559 -----~~gY~~~~~~~~~~~~~~~~f~ 580 (592)
+.||+++++.+......+.||.
T Consensus 412 ~g~~~~~gY~~~~~~~~~~~~~~g~~~ 438 (557)
T PRK07059 412 RGPQVMAGYWNRPDETAKVMTADGFFR 438 (557)
T ss_pred eCCccchhhhcCHHHHhhhcccCCcee
Confidence 6899999987754333344554
|
|
| >TIGR03205 pimA dicarboxylate--CoA ligase PimA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=389.41 Aligned_cols=376 Identities=20% Similarity=0.172 Sum_probs=281.2
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+|+++|+++.+. .+||.||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 31 ~~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 102 (541)
T TIGR03205 31 AADYGPRPALEFRDR--------PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVHLS 102 (541)
T ss_pred HHHcCCCceEEECCc--------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecC
Confidence 378999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhc-CCCcEEEEcCCCCCC------CCCCccCcccHHHhhc
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-APLKAIVLPAIGNDV------GIPLREQDLSWKDFLS 337 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~ 337 (592)
|.++.+++.+++++++++++++++.. ...+...+..+. .....+++....... ..........+++++.
T Consensus 103 ~~~~~~~l~~~i~~~~~~~vi~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 103 PLDGERALSHKLSDSGARLLITSDLA----ALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred CCCCHHHHHHHHhhcCceEEEEeCch----hhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 99999999999999999999998631 011111111111 111222222111000 0001122344566554
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhh-----hcCCCCCCEEEEecccchhchh
Q 007715 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-----HIDLKVGDVYCWPTNLGWVMGP 412 (592)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~-----~~~~~~~d~~l~~~~~~~~~~~ 412 (592)
.... ........++++++++|||||||+||||+++|+++.+....... .......+++++..|++|..+.
T Consensus 179 ~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~ 253 (541)
T TIGR03205 179 GAAA-----PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYAL 253 (541)
T ss_pred cCCC-----CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHH
Confidence 3211 11112345789999999999999999999999998765432211 1122345789999999998776
Q ss_pred -HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHH
Q 007715 413 -VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWL 491 (592)
Q Consensus 413 -~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~ 491 (592)
..++.++..|+++++.+ ..++..+++.|+++++|++..+|+++..|.+.......+++++|.+++||+++++++.+++
T Consensus 254 ~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 254 TVILLRSLRRGDLISLHQ-RFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHH
Confidence 45778899999988875 5688999999999999999999999999987543344567899999999999999998888
Q ss_pred HHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEE--CCCCCCCCCCCCcceeEEE-----ecccCC
Q 007715 492 SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL--DECGVPYPDDQPCVGEVGL-----FPLYLG 564 (592)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~Il--D~~g~~vp~G~~giGel~v-----~~gY~~ 564 (592)
.+.++ .++++.||+||++..++.........++++|+|++++.++|+ |+++++++.|+. |||++ +.||++
T Consensus 333 ~~~~~-~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~ 409 (541)
T TIGR03205 333 ERKTG-LKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEV--GELRIRGPNVTRGYWN 409 (541)
T ss_pred HHHhC-CCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCccCCCCCe--eEEEEecCCccccccC
Confidence 77654 789999999999865444333333446789999999998875 578899999984 99999 678999
Q ss_pred CchhhccccccccccccC
Q 007715 565 ASDRLLNADHEEVYFRGM 582 (592)
Q Consensus 565 ~~~~~~~~~~~~~~f~~~ 582 (592)
+|+.+.......+|-++|
T Consensus 410 ~~~~~~~~~~~~~~~TGD 427 (541)
T TIGR03205 410 RPEESAEAFVGDRFLTGD 427 (541)
T ss_pred ChhhhHhhhccCCcccCc
Confidence 998774433333444444
|
PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids. |
| >PRK08751 putative long-chain fatty acyl CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=390.74 Aligned_cols=378 Identities=18% Similarity=0.185 Sum_probs=283.3
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHH-hh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD-TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~-~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++.+|+++|+++.++ .+||+||.++++++|+.|+ +. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 35 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 35 VAKFADRPAYHSFGK--------TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNV 106 (560)
T ss_pred HHhCCCCceEEECCc--------eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEecc
Confidence 378999999998766 9999999999999999997 57 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCC-------------------CCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND-------------------VGIP 324 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------------~~~~ 324 (592)
+|.++.+++.+++++++++++++++.+. .....+....+...+++...... ....
T Consensus 107 ~p~~~~~~~~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08751 107 NPLYTPRELKHQLIDSGASVLVVIDNFG------TTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEY 180 (560)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEcchhH------HHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhcccccc
Confidence 9999999999999999999999987532 11111111112111111100000 0000
Q ss_pred CccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC----CCCC-CE
Q 007715 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID----LKVG-DV 399 (592)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~----~~~~-d~ 399 (592)
..++...+.+....... .........++++++++|||||||+||||+++|+++...+.+....+. +.++ ++
T Consensus 181 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08751 181 RINGAIRFREALALGRK----HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEV 256 (560)
T ss_pred CCCccccHHHHHhccCC----CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCce
Confidence 00112234443332211 111223345789999999999999999999999999877765544443 3333 56
Q ss_pred EEEecccchhchh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEE
Q 007715 400 YCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (592)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~ 478 (592)
++...++.|..+. ...+.++..|+++++.....++..+++.|+++++|++..+|+++..+.+.......++++||.+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~ 336 (560)
T PRK08751 257 VITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLG 336 (560)
T ss_pred EEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeee
Confidence 6777888888776 345677888998888765568889999999999999999999999998876555567889999999
Q ss_pred ecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE
Q 007715 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (592)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v 558 (592)
||++++..+...+.+.+ ++++++.||+||++..+...........+++|+|+++++++|+|++|++++.|+. |||+|
T Consensus 337 gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~--Gel~v 413 (560)
T PRK08751 337 GGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKDDAGTVLAIGEI--GELCI 413 (560)
T ss_pred CCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEECCCCCCCCCCCc--eEEEE
Confidence 99999999988888765 4789999999999765433222223345789999999999999999999999984 99999
Q ss_pred -----ecccCCCchhhcccccccccc-ccCcC
Q 007715 559 -----FPLYLGASDRLLNADHEEVYF-RGMPM 584 (592)
Q Consensus 559 -----~~gY~~~~~~~~~~~~~~~~f-~~~~~ 584 (592)
++||+++|+.+......+.|| ++|-+
T Consensus 414 ~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~ 445 (560)
T PRK08751 414 KGPQVMKGYWKRPEETAKVMDADGWLHTGDIA 445 (560)
T ss_pred ecCccchhhcCChhhhhhccccCCCccccceE
Confidence 789999998764433333344 55433
|
|
| >PRK06188 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=387.62 Aligned_cols=366 Identities=15% Similarity=0.124 Sum_probs=286.2
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+++|+++|+++.+. .+||+||.++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++|++|
T Consensus 23 ~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 94 (524)
T PRK06188 23 KRYPDRPALVLGDT--------RLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALHP 94 (524)
T ss_pred HHCCCCeEEEECCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEeccc
Confidence 68999999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (592)
..+.+++..++++++++.+++++... ................++...... ......+.......
T Consensus 95 ~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~---- 158 (524)
T PRK06188 95 LGSLDDHAYVLEDAGISTLIVDPAPF-----VERALALLARVPSLKHVLTLGPVP-------DGVDLLAAAAKFGP---- 158 (524)
T ss_pred CCCHHHHHHHHHhcCceEEEEecchh-----hHHHHHHhhhcCCceEEEEeCCcc-------chhhHHHhhhccCc----
Confidence 99999999999999999999987521 111111111122111111111000 00011111111100
Q ss_pred CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEE
Q 007715 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (592)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~l 425 (592)
.... ....++++++|+|||||||.||||+++|+++..........+++..+|++++..|++|..+.. ++.+++.|+++
T Consensus 159 ~~~~-~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~ 236 (524)
T PRK06188 159 APLV-AAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FLPTLLRGGTV 236 (524)
T ss_pred cccc-ccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HHHHHHcCCEE
Confidence 0111 122346799999999999999999999999998888887888899999999999999987764 67889999999
Q ss_pred EEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecccc
Q 007715 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (592)
Q Consensus 426 vl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (592)
++.+ ..++..+++.|+++++|++..+|+++..|++.......+++++|.+++||++++++....+.+.++ ..+++.||
T Consensus 237 ~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~~YG 314 (524)
T PRK06188 237 IVLA-KFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFG-PIFAQYYG 314 (524)
T ss_pred EEcC-CCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhC-chhhheeC
Confidence 9987 467899999999999999999999999999876555567899999999999999998877777665 67999999
Q ss_pred chhcccccccCCcC-----CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccc
Q 007715 506 GTELSSAYIQGSLL-----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (592)
Q Consensus 506 ~TE~~~~~~~~~~~-----~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~ 575 (592)
+||++.++...... ......++|+|++|++++|+|+++++++.|+. |||++ +.||+++++.+......
T Consensus 315 ~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~~~~~~~~~~ 392 (524)
T PRK06188 315 QTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEV--GEICVRGPLVMDGYWNRPEETAEAFRD 392 (524)
T ss_pred ccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCe--eEEEEECcchhhhhcCChHHhhhhhcC
Confidence 99996544332221 22355789999999999999999999999995 99999 68999999876444333
Q ss_pred ccccccC
Q 007715 576 EVYFRGM 582 (592)
Q Consensus 576 ~~~f~~~ 582 (592)
+||.++|
T Consensus 393 g~~~TGD 399 (524)
T PRK06188 393 GWLHTGD 399 (524)
T ss_pred Cceeecc
Confidence 4444444
|
|
| >PRK07787 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=381.76 Aligned_cols=342 Identities=19% Similarity=0.144 Sum_probs=273.9
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
.++.++++|+++.++ ++||+||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|+++
T Consensus 10 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~ 77 (471)
T PRK07787 10 AAAADIADAVRIGGR--------VLSRSDLAGAATAVAERVA----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPP 77 (471)
T ss_pred hcccCCceEEEeCCc--------EEEHHHHHHHHHHHHHHhc----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCC
Confidence 357789999999776 9999999999999999986 5799999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (592)
..+.+++.++++++++++++++.... . ...+...+.. ....+.
T Consensus 78 ~~~~~~l~~~l~~~~~~~il~~~~~~-----~-------~~~~~~~~~~-------------~~~~~~------------ 120 (471)
T PRK07787 78 DSGVAERRHILADSGAQAWLGPAPDD-----P-------AGLPHVPVRL-------------HARSWH------------ 120 (471)
T ss_pred CCChHHHHHHHHhcCCCEEEecCCcc-----c-------ccccceeeec-------------cccccc------------
Confidence 99999999999999999999976310 0 0000000000 000000
Q ss_pred CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCE
Q 007715 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (592)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (592)
......++++++|+|||||||.||||+++|+++...+......+++.++|++++..|+.|..+. ..++.++..|++
T Consensus 121 ---~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 197 (471)
T PRK07787 121 ---RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNR 197 (471)
T ss_pred ---cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCE
Confidence 0112346899999999999999999999999998888777777888999999999999998887 468899999999
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 425 lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
+++.+ ..++..+++.|+ +++|++..+|+++..|.+.... ...++++|.+++||+++++++.+++...++ .+++|.|
T Consensus 198 ~~~~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~-~~~~~~Y 273 (471)
T PRK07787 198 FVHTG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALTG-HRPVERY 273 (471)
T ss_pred EEecC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHcC-CCeeccc
Confidence 99875 568899999999 9999999999999999875322 335789999999999999999998887664 7899999
Q ss_pred cchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCC-CCCCcceeEEE-----ecccCCCchhhcccccc-cc
Q 007715 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP-DDQPCVGEVGL-----FPLYLGASDRLLNADHE-EV 577 (592)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp-~G~~giGel~v-----~~gY~~~~~~~~~~~~~-~~ 577 (592)
|+||++..... .......+.++|+|++|++++|+|+++++++ .|+. +|||++ +.||+++|+.+...... +|
T Consensus 274 G~tE~~~~~~~-~~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~-~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~ 351 (471)
T PRK07787 274 GMTETLITLST-RADGERRPGWVGLPLAGVETRLVDEDGGPVPHDGET-VGELQVRGPTLFDGYLNRPDATAAAFTADGW 351 (471)
T ss_pred CccccCcceec-CCCCcccCCcccccCCCcEEEEECCCCCCCCCCCCC-ceEEEEECcccchhhcCChhhchhcccCCCc
Confidence 99999754322 2222334578999999999999999999998 4532 599999 78999999987554443 34
Q ss_pred ccccCcCC
Q 007715 578 YFRGMPMY 585 (592)
Q Consensus 578 ~f~~~~~~ 585 (592)
|.++|-++
T Consensus 352 ~~TGDlg~ 359 (471)
T PRK07787 352 FRTGDVAV 359 (471)
T ss_pred eecCceEE
Confidence 44555333
|
|
| >PRK13390 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=383.18 Aligned_cols=353 Identities=18% Similarity=0.146 Sum_probs=268.0
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+|+.+|+++|+++.+.+ +.+||+||.++++++|++|.++ +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 6 ~a~~~p~~~a~~~~~~~------~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 6 HAQIAPDRPAVIVAETG------EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAI 79 (501)
T ss_pred hhhhCCCCcEEEecCCC------eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecc
Confidence 34789999999875321 3899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
++.++.+++.+++++++++++++++... .......... ...+.+.. . ......+++.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~-~~~~~~~~--~------~~~~~~~~~~~~~~~~-- 142 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAALD------GLAAKVGADL-PLRLSFGG--E------IDGFGSFEAALAGAGP-- 142 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchhh------hHHHHhhhcc-ceEEEecC--c------ccccccHHHHhcccCC--
Confidence 9999999999999999999999976431 0111110000 01111110 0 0111223333221110
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEe--CCchHHHHH----HHhhhhcCCCCCCEEEEecccchhchhHHHHH
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPW--TQLSSIRCT----AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~--sh~~l~~~~----~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (592)
.....+++++|+|||||||.||||++ +|+++.... ......+++..+|+++..+|++|+.++...+.
T Consensus 143 -------~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~ 215 (501)
T PRK13390 143 -------RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSM 215 (501)
T ss_pred -------CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHH
Confidence 01122357999999999999999995 555554321 11233567889999999999999988754455
Q ss_pred HHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhc
Q 007715 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (592)
Q Consensus 418 ~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~ 495 (592)
.+..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+... ....+++++|.+++||+++++++.+.+...+
T Consensus 216 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~ 294 (501)
T PRK13390 216 VHALGGTVVLAK-RFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL 294 (501)
T ss_pred HHhcCceEEEcC-CcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc
Confidence 678899998876 5678999999999999999999999999886532 2334578999999999999999988887765
Q ss_pred cCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhc
Q 007715 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLL 570 (592)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~ 570 (592)
+ .++++.||+||++.++...........+++|+|++| .++|+|++|+++++|++ |||+| +.||+++|+.+.
T Consensus 295 ~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~~~t~ 370 (501)
T PRK13390 295 G-PIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGRI--GTVYFERDRLPFRYLNDPEKTA 370 (501)
T ss_pred C-CceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCCccccccCChhhhH
Confidence 4 689999999999764333222222345789999999 79999999999999995 99999 679999999875
Q ss_pred cc
Q 007715 571 NA 572 (592)
Q Consensus 571 ~~ 572 (592)
..
T Consensus 371 ~~ 372 (501)
T PRK13390 371 AA 372 (501)
T ss_pred Hh
Confidence 44
|
|
| >PLN03102 acyl-activating enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=388.65 Aligned_cols=376 Identities=17% Similarity=0.169 Sum_probs=272.4
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+||++|+++.+. ++||+||+++++++|++|.++ +++||+|+|+++|++++++++|||+++|++++||+|
T Consensus 25 ~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~~ 96 (579)
T PLN03102 25 ECYPNRTSIIYGKT--------RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINT 96 (579)
T ss_pred HhCCCCeEEEECCc--------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccc
Confidence 67999999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC-------CcEEEEcCCCCCCCCCCccCcccHHHhhcc
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-------LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (592)
.++.+++.++++.+++++||+++++. +....+...++ ..++++........ ......+++++...
T Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 168 (579)
T PLN03102 97 RLDATSIAAILRHAKPKILFVDRSFE------PLAREVLHLLSSEDSNLNLPVIFIHEIDFPKR--PSSEELDYECLIQR 168 (579)
T ss_pred cCCHHHHHHHHhccCCeEEEEChhhH------HHHHHHHhhccccccccCceEEEecccccccC--CcccccCHHHHHhc
Confidence 99999999999999999999987542 12222221111 12333322111000 00122345555543
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHH
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (592)
................++++++|+|||||||.||||+++|+++..........+.+...+++++..|++|..++...+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~ 248 (579)
T PLN03102 169 GEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGT 248 (579)
T ss_pred cCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhHHHHH
Confidence 22100000000112346899999999999999999999999975443333334456677889999999998888767788
Q ss_pred HHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCC
Q 007715 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (592)
Q Consensus 419 L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~ 498 (592)
+..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+..++.. + +.
T Consensus 249 ~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g~ 325 (579)
T PLN03102 249 AARGGTSVCMR-HVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-GF 325 (579)
T ss_pred HHhcCcEEeec-cCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-CC
Confidence 99999999886 457788999999999999999999999998764333334567888999999999998888764 4 47
Q ss_pred ceeccccchhcccccccCCcC------C-------CCccCcccccCCCceEEEEC-CCCCCCCCC--CCcceeEEE----
Q 007715 499 AIIESCGGTELSSAYIQGSLL------Q-------PQAFGAFSTATMTAGLVILD-ECGVPYPDD--QPCVGEVGL---- 558 (592)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~------~-------~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G--~~giGel~v---- 558 (592)
++++.||+||+++.++..... . ....+..+.|++ .+.|+| +.++++|.+ + +|||+|
T Consensus 326 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~--~GEl~v~g~~ 401 (579)
T PLN03102 326 QVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKT--MGEIVIKGSS 401 (579)
T ss_pred eEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCC--ceEEEEECcc
Confidence 899999999997543321110 0 011223334444 456677 467888753 4 599998
Q ss_pred -ecccCCCchhhccccccccccccCcCC
Q 007715 559 -FPLYLGASDRLLNADHEEVYFRGMPMY 585 (592)
Q Consensus 559 -~~gY~~~~~~~~~~~~~~~~f~~~~~~ 585 (592)
++||+|+|+.+...+...||.++|-++
T Consensus 402 ~~~GY~~~~~~t~~~f~~gw~~TGDlg~ 429 (579)
T PLN03102 402 IMKGYLKNPKATSEAFKHGWLNTGDVGV 429 (579)
T ss_pred hhhhhcCChhhhHhhhccCceecCceEE
Confidence 789999999774443344444555444
|
|
| >COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=346.96 Aligned_cols=382 Identities=18% Similarity=0.186 Sum_probs=306.8
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+|+++||++||++.++ .+||+||+++++++|..|+++ +++||+|.+.+||..+++++++|.+|+|++.|.-
T Consensus 37 ~A~~~pdriAv~d~~~--------~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlA 108 (542)
T COG1021 37 HAARYPDRIAVIDGER--------RLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLA 108 (542)
T ss_pred HHhhcCCceEEecCcc--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchhhc
Confidence 3489999999999887 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
-|++...+|.+..+.++++.+|.++.. ..+...+...++....+....++...... .....+..+.....
T Consensus 109 LpsHr~~Ei~~f~~~~e~~~~i~~~~~-~gFd~~~~ar~~~a~~~tlr~v~v~ge~~-------~~~~~~~~~~~~a~-- 178 (542)
T COG1021 109 LPSHRASELGAFASQIEAALLIVARQH-SGFDYRPFARELVAKHPTLRHVIVAGEAE-------HPSVLEAALCHPAG-- 178 (542)
T ss_pred cchhhHHHHHHHHHhhcchheeechhh-cccCcHHHHHHHHhhCCcceEEEEccCCC-------CcchhhhhhhCccc--
Confidence 999999999999999999999998754 23334445555555555533333222111 01112222222111
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh--HHHHHHHHc
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP--VILFSSFLN 421 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~--~~~~~~L~~ 421 (592)
...+..+.+++++||...+.||||.||-+..+|.....++....+.++++..+++++..|..|.+.+ -.+++.++.
T Consensus 179 --~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~a 256 (542)
T COG1021 179 --LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLA 256 (542)
T ss_pred --cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchhheeee
Confidence 1122345567889999999999999999999999887777777788899999999999999987666 358899999
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|+++|+.+ +++++....+|++|+||+..++|.+...|+........+++|||.+-+||+.++++++++....++ |.+-
T Consensus 257 gG~VVla~-~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~lg-C~LQ 334 (542)
T COG1021 257 GGTVVLAP-DPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVLG-CQLQ 334 (542)
T ss_pred ccEEEECC-CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhhC-chHH
Confidence 99999987 678899999999999999999999999999887778889999999999999999999999887775 8999
Q ss_pred ccccchhcccccccCCcCCCCccCcccccC-CCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccc
Q 007715 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~ 575 (592)
+.+||.|.-++++-.....+.-..+-|+|+ |.-+++|+|++|+||++|++ |+|.. .+||+.-|+-....++-
T Consensus 335 QVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~--G~LltRGPYTirGYyrap~HNa~aF~a 412 (542)
T COG1021 335 QVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEV--GELLTRGPYTIRGYYRAPEHNARAFDA 412 (542)
T ss_pred HHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCc--ceeeecCCeeeeeeccCchhhhhccCc
Confidence 999999986654432222222235789997 56799999999999999995 99987 89999999977666665
Q ss_pred ccccccCcCC----cceec
Q 007715 576 EVYFRGMPMY----KGMVH 590 (592)
Q Consensus 576 ~~~f~~~~~~----~gy~~ 590 (592)
++||.+.+.. .||..
T Consensus 413 ~GFYrsGD~V~~~~dGyl~ 431 (542)
T COG1021 413 DGFYRSGDLVRRDPDGYLV 431 (542)
T ss_pred CCceecCceeEecCCceEE
Confidence 6666544433 36654
|
|
| >PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=382.92 Aligned_cols=343 Identities=18% Similarity=0.200 Sum_probs=282.0
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+|+++|+++.+. .+||+||.++++++|.+|.+. +++|++|+++++|+.++++++|||+++|++++|+++
T Consensus 13 ~~~p~~~~~~~~~~--------~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~ 84 (503)
T PRK04813 13 QTQPDFPAYDYLGE--------KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDV 84 (503)
T ss_pred HhCCCceEEEeCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCC
Confidence 67899999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (592)
.++.+++.++++.++++++++++..... . .... ...++++...... ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~----~~~~----------------~~~~~~~~~~~~~--~~ 132 (503)
T PRK04813 85 SSPAERIEMIIEVAKPSLIIATEELPLE----------I----LGIP----------------VITLDELKDIFAT--GN 132 (503)
T ss_pred CChHHHHHHHHHhcCCCEEEeccccccc----------c----cCCc----------------EEehHHhhhhhhc--cc
Confidence 9999999999999999999998753100 0 0000 0111121111000 00
Q ss_pred CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEE
Q 007715 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (592)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~l 425 (592)
.........++++++++|||||||.||||.++|+++.....+....+.+..+++++...|++|+.+.+.++.+|..|+++
T Consensus 133 ~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~ 212 (503)
T PRK04813 133 PYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTL 212 (503)
T ss_pred cccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCEE
Confidence 00112234568899999999999999999999999988887777778899999999999999999988888999999999
Q ss_pred EEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecc
Q 007715 426 ALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (592)
Q Consensus 426 vl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (592)
++.+.. .++..+++.++++++|++..+|+++..+.........+++++|.++++|+++++.+.+++.+.+++.++++.
T Consensus 213 v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~ 292 (503)
T PRK04813 213 VALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNT 292 (503)
T ss_pred EEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeC
Confidence 998753 377889999999999999999999988765544445568899999999999999999999998877889999
Q ss_pred ccchhcccccccCCc----CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 504 CGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 504 YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
||+||++..++.... .......++|+|.++++++|+|++|.+++.|+. |||++ +.||+++++.+..
T Consensus 293 yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~~~~~~ 367 (503)
T PRK04813 293 YGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQ--GEIVISGPSVSKGYLNNPEKTAE 367 (503)
T ss_pred cccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCc--eEEEEeccccccccCCChhHhHH
Confidence 999998754332111 112345689999999999999999999999984 99999 6899999987744
|
|
| >PRK05620 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=387.03 Aligned_cols=363 Identities=14% Similarity=0.134 Sum_probs=279.9
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
..+||++|+++.+. ..+.+||+||.++++++|++|++ . +++||+|+++++|+++++++++||+++|++++|++
T Consensus 21 ~~~~~~~a~~~~~~-----~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l~ 95 (576)
T PRK05620 21 TVHGDTTVTTWGGA-----EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPLN 95 (576)
T ss_pred HhCCCceEEEEcCC-----ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeecc
Confidence 78999999997542 34589999999999999999997 7 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCC---CCCCccCcccHHHhhccC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDV---GIPLREQDLSWKDFLSSV 339 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~ 339 (592)
|.++.+++.+++++++++++|+++.+. .....+....+. .++++....... .........+|+++....
T Consensus 96 ~~~~~~~l~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (576)
T PRK05620 96 KQLMNDQIVHIINHAEDEVIVADPRLA------EQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGR 169 (576)
T ss_pred cccCHHHHHHHHhccCCcEEEEChhhH------HHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhcC
Confidence 999999999999999999999987532 122222222222 222222111000 000011234577776532
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHh--hhhcCCCCCCEEEEecccchhchhHHHHH
Q 007715 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG--WAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (592)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (592)
.. ........++++++++|||||||+||||+++|+++....... ...+++..++++++.+|++|+.++...+.
T Consensus 170 ~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 244 (576)
T PRK05620 170 ST-----VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGVPLA 244 (576)
T ss_pred CC-----cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHHHHH
Confidence 21 112233567899999999999999999999999985444322 23567889999999999999999877889
Q ss_pred HHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccC
Q 007715 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (592)
Q Consensus 418 ~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~ 497 (592)
++..|+++++.....++..+++.|+++++|++..+|+++..|+........+..+||.+++||+++++++.+++...++
T Consensus 245 ~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~- 323 (576)
T PRK05620 245 AFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERYG- 323 (576)
T ss_pred HHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHhC-
Confidence 9999999998866678899999999999999999999999887653323334568999999999999999988877764
Q ss_pred CceeccccchhcccccccCCcCC-------CCccCcccccCCCceEEEECCCCCCCC--CCCCcceeEEE-----ecccC
Q 007715 498 NAIIESCGGTELSSAYIQGSLLQ-------PQAFGAFSTATMTAGLVILDECGVPYP--DDQPCVGEVGL-----FPLYL 563 (592)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~-------~~~~~~iG~p~~~~~v~IlD~~g~~vp--~G~~giGel~v-----~~gY~ 563 (592)
+++++.||+||++...+...... .....++|++.+|++++|+|+ |++++ .|. +|||++ ++||+
T Consensus 324 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~~~--~Gel~v~g~~~~~gY~ 400 (576)
T PRK05620 324 VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTDRN--EGEIQVRGNWVTASYY 400 (576)
T ss_pred CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCCCC--ceEEEEEcCccccccc
Confidence 78999999999986443322211 012347899999999999998 88775 355 599998 78999
Q ss_pred CCchhh
Q 007715 564 GASDRL 569 (592)
Q Consensus 564 ~~~~~~ 569 (592)
++++.+
T Consensus 401 ~~~~~t 406 (576)
T PRK05620 401 HSPTEE 406 (576)
T ss_pred CCcccc
Confidence 999865
|
|
| >PRK06018 putative acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=383.62 Aligned_cols=362 Identities=17% Similarity=0.190 Sum_probs=277.5
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|++.... +..+++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 20 a~~~~~~~~~~~~~~----~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 95 (542)
T PRK06018 20 ARIHGNREVVTRSVE----GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTVN 95 (542)
T ss_pred HHhCCCceEEEeecc----CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeeccc
Confidence 478999999985321 1245899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+.++.+++..+++++++++++++..+. +.+.++....+. ..+++..... ......++...|+++......
T Consensus 96 ~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 167 (542)
T PRK06018 96 PRLFPEQIAWIINHAEDRVVITDLTFV------PILEKIADKLPSVERYVVLTDAAH-MPQTTLKNAVAYEEWIAEADG- 167 (542)
T ss_pred cccCHHHHHHHHhccCCCEEEEccccH------HHHHHHHhhCCCccEEEEeccccc-ccccCccccccHHHHhccCCc-
Confidence 999999999999999999999987542 222222222222 2222221111 000011123345555443221
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHH-HH-HHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHH
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RC-TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~-~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (592)
........++++++|+|||||||.||||+++|++.+ +. .......++++.+|+++...|++|+.++...+.++.
T Consensus 168 ----~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~ 243 (542)
T PRK06018 168 ----DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIAFSAPS 243 (542)
T ss_pred ----ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhhh
Confidence 111223456789999999999999999999999743 22 223345677889999999999999888766778899
Q ss_pred cCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 421 ~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
.|+++++.....++..+++.++++++|++.++|+++..|.+.......++++||.+++|||++++++.+++++ + ++++
T Consensus 244 ~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~~ 321 (542)
T PRK06018 244 MGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-GVEV 321 (542)
T ss_pred cCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-CCCe
Confidence 9999998765668889999999999999999999999998765444556789999999999999999999887 4 5899
Q ss_pred eccccchhcccccccCCcCC----------CCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCC
Q 007715 501 IESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGA 565 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~ 565 (592)
++.||+||++.+.+.+.... .....++|+|++|++++|+|++++++|.+...+|||++ +.||++.
T Consensus 322 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~ 401 (542)
T PRK06018 322 RHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWDGKTFGRLKVRGPAVAAAYYRV 401 (542)
T ss_pred EeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCCCCceeEEEEecCCcchhhhcC
Confidence 99999999986543322110 01235799999999999999999999874212599999 6799984
|
|
| >PRK06164 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=384.96 Aligned_cols=375 Identities=18% Similarity=0.170 Sum_probs=281.3
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+|+++|++..+. ++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 20 a~~~p~~~a~~~~~~--------~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l~ 91 (540)
T PRK06164 20 ARARPDAVALIDEDR--------PLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIAVN 91 (540)
T ss_pred HHhCCCCeEEecCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEecC
Confidence 378999999997655 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhc----CC--CcEEEEcCCCCCCCCCCccCcccHHHhhcc
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA----AP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (592)
+..+.+++.+++++++++++++++++.. .+....+... .+ ..++++......... .....+.++...
T Consensus 92 ~~~~~~~l~~~i~~~~~~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 164 (540)
T PRK06164 92 TRYRSHEVAHILGRGRARWLVVWPGFKG----IDFAAILAAVPPDALPPLRAIAVVDDAADATPA---PAPGARVQLFAL 164 (540)
T ss_pred CCCCcHHHHHHHHhcCccEEEEcccccc----ccHHHHhhcccccccCCcceEEEeccCcccCCC---CCcccccccccc
Confidence 9999999999999999999999876421 1111111111 11 122222211100000 000011111111
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHH
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (592)
... ............++++++++|||||||+||||+++|+++.+.+......+++.+++++++..|++|..++..++.+
T Consensus 165 ~~~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 243 (540)
T PRK06164 165 PDP-APPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFSTLLGA 243 (540)
T ss_pred ccc-CCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHHH
Confidence 000 0000001122346889999999999999999999999999888877788889999999999999999999889999
Q ss_pred HHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEec-CCCChhhHHHHHHhccC
Q 007715 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG-ETSNVDDDLWLSSKAWY 497 (592)
Q Consensus 419 L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gG-e~l~~~~~~~~~~~~~~ 497 (592)
+..|+++++.+ ..++..+++.|+++++|+++.+|+++..|.+.. ....+++++|.+.++| .+...++..++... +
T Consensus 244 l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~ 319 (540)
T PRK06164 244 LAGGAPLVCEP-VFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR--G 319 (540)
T ss_pred HhcCceEEecC-CCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--C
Confidence 99999999876 567889999999999999999999999998762 3345688999887766 44555566666554 5
Q ss_pred CceeccccchhcccccccCCcCC--CCccCcccccC-CCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchh
Q 007715 498 NAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTAT-MTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDR 568 (592)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~-~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~ 568 (592)
+++++.||+||++..++...... .....+.|.|+ +++.++|+| +++++++.|+ +|||+| +.||+++|+.
T Consensus 320 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~g~~~~~gY~~~~~~ 397 (540)
T PRK06164 320 VPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGE--SGEIEIRAPSLMRGYLDNPDA 397 (540)
T ss_pred CceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCC--eeEEEEecccccccccCCchh
Confidence 88999999999986544332211 12335678886 899999999 6799999999 499999 7899999998
Q ss_pred hcccccccccc-ccC
Q 007715 569 LLNADHEEVYF-RGM 582 (592)
Q Consensus 569 ~~~~~~~~~~f-~~~ 582 (592)
+......+.|| +||
T Consensus 398 t~~~~~~~~~~~TGD 412 (540)
T PRK06164 398 TARALTDDGYFRTGD 412 (540)
T ss_pred hhhcccCCCceecCC
Confidence 75544434454 444
|
|
| >PRK13383 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=383.40 Aligned_cols=351 Identities=16% Similarity=0.124 Sum_probs=273.8
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+||++|+++.+. .+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 45 a~~~p~~~a~~~~~~--------~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl~ 116 (516)
T PRK13383 45 AARWPGRTAIIDDDG--------ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPIS 116 (516)
T ss_pred HHHCCCCcEEEeCCC--------cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEcC
Confidence 468999999998665 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+.++.+++.+++++++++++++++.+. ..+.. ....+..+... . ..... .
T Consensus 117 ~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~-~~~~~~~~~~~-----------~---~~~~~-~----- 166 (516)
T PRK13383 117 TEFRSDALAAALRAHHISTVVADNEFA---------ERIAG-ADDAVAVIDPA-----------T---AGAEE-S----- 166 (516)
T ss_pred ccCCHHHHHHHHhcCCCCEEEEchhHH---------HHHHh-hhcceEEeccc-----------h---hhhhc-C-----
Confidence 999999999999999999999987542 11111 11122222100 0 00000 0
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHH--HHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcC
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR--CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~--~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (592)
...+...++.++|+|||||||+||||+++|+.... ........+++.++|+++...|++|..++..++.++..|
T Consensus 167 ----~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G 242 (516)
T PRK13383 167 ----GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALG 242 (516)
T ss_pred ----CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcC
Confidence 00111235678999999999999999999974321 112223456788999999999999999988788899999
Q ss_pred CEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC--CCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
+++++.. ..++..+++.++++++|.+.++|+++..|.+.... ...+++++|.+++||+++++++.+++.+.++ .++
T Consensus 243 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g-~~v 320 (516)
T PRK13383 243 GTVLTHR-HFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYG-DIL 320 (516)
T ss_pred CEEEECC-CCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcC-chh
Confidence 9998865 57889999999999999999999999999865321 2235789999999999999999999888775 789
Q ss_pred eccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccc
Q 007715 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~ 575 (592)
+|.||+||++..+............++|+|++|++++|+|++|+++++|+. |||++ +.||++++... ...
T Consensus 321 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~~Y~~~~~~~---~~~ 395 (516)
T PRK13383 321 YNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRVT--GRIFVGGELAGTRYTDGGGKA---VVD 395 (516)
T ss_pred hhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCCc--eEEEEecCcccccccCCchhh---eec
Confidence 999999999754433222223345789999999999999999999999995 99998 67898876532 123
Q ss_pred ccccccCcCC
Q 007715 576 EVYFRGMPMY 585 (592)
Q Consensus 576 ~~~f~~~~~~ 585 (592)
+||.++|.++
T Consensus 396 g~~~TGDl~~ 405 (516)
T PRK13383 396 GMTSTGDMGY 405 (516)
T ss_pred CceecceeEE
Confidence 4555565444
|
|
| >PRK13388 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-43 Score=381.99 Aligned_cols=353 Identities=17% Similarity=0.155 Sum_probs=267.9
Q ss_pred CCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v-~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
..|+++|+++.+. .+||+||.++++++|++|.+. + ++||+|+++++|++++++++|||+++|++++|+||
T Consensus 13 ~~p~~~Al~~~~~--------~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p 84 (540)
T PRK13388 13 AGDDTIAVRYGDR--------TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNT 84 (540)
T ss_pred ccCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecc
Confidence 4699999998766 999999999999999999999 9 89999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
.++.+++.+++++++++++|+++.... ....+. .+. .++++. ...+.+++.....
T Consensus 85 ~~~~~~l~~~l~~~~~~~~i~~~~~~~------~~~~~~--~~~~~~i~~~-------------~~~~~~~~~~~~~--- 140 (540)
T PRK13388 85 TRRGAALAADIRRADCQLLVTDAEHRP------LLDGLD--LPGVRVLDVD-------------TPAYAELVAAAGA--- 140 (540)
T ss_pred cCChHHHHHHHHhcCCCEEEEChhhhH------HHHhhc--ccCceEEEcc-------------chhhhhhhccccC---
Confidence 999999999999999999999875321 111110 111 222221 0123333321111
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHH-HHHHHHcCC
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGA 423 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G~ 423 (592)
..+.....++++++|+|||||||+||||+++|+++..........++++++|+++..+|+.|..++.. ++.+|..|+
T Consensus 141 --~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~ 218 (540)
T PRK13388 141 --LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGA 218 (540)
T ss_pred --cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCc
Confidence 01112345799999999999999999999999999888777778889999999999999999988854 445799999
Q ss_pred EEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecc
Q 007715 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (592)
Q Consensus 424 ~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (592)
++++.+ ..++..+++.|+++++|++..+|+.+..++...........+++. ++ |++++++...++...++ ++++|.
T Consensus 219 ~~v~~~-~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~-~~-G~~~~~~~~~~~~~~~~-~~l~~~ 294 (540)
T PRK13388 219 AVALPA-KFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRV-AF-GNEASPRDIAEFSRRFG-CQVEDG 294 (540)
T ss_pred EEEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEE-EE-CCCCCHHHHHHHHHHhC-Cceecc
Confidence 998865 467889999999999999999999999988654322222346664 33 55567777777777664 789999
Q ss_pred ccchhcccccccCCcCCCCccCcccccCCCceEE-----------EECCCCCCCC-CCCCcceeEEE------ecccCCC
Q 007715 504 CGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLV-----------ILDECGVPYP-DDQPCVGEVGL------FPLYLGA 565 (592)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~-----------IlD~~g~~vp-~G~~giGel~v------~~gY~~~ 565 (592)
||+||++.+++.. . ....+++|+|++|++++ ++|++|++++ .|. +|||++ +.||+++
T Consensus 295 YG~tE~~~~~~~~-~--~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~~--~GEl~v~~g~~~~~gY~~~ 369 (540)
T PRK13388 295 YGSSEGAVIVVRE-P--GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADEA--IGELVNTAGAGFFEGYYNN 369 (540)
T ss_pred cccccccceeecC-C--CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCCc--ceEEEEecCCcccccccCC
Confidence 9999998654321 1 23457899999998764 5667777764 344 599998 4699999
Q ss_pred chhhccccccccccccCc
Q 007715 566 SDRLLNADHEEVYFRGMP 583 (592)
Q Consensus 566 ~~~~~~~~~~~~~f~~~~ 583 (592)
|+.+......+||.++|-
T Consensus 370 ~~~t~~~~~~g~~~TGD~ 387 (540)
T PRK13388 370 PEATAERMRHGMYWSGDL 387 (540)
T ss_pred hHHHHHHhhcCceeccce
Confidence 997643332334444443
|
|
| >PRK06710 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-43 Score=384.55 Aligned_cols=374 Identities=21% Similarity=0.248 Sum_probs=276.5
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+|+++|+++.+. .+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 35 ~~~p~~~a~~~~~~--------~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~p 106 (563)
T PRK06710 35 SRYPEKKALHFLGK--------DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTNP 106 (563)
T ss_pred HHCCCceEEEecCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccCc
Confidence 68999999999776 899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCC--C----------------CC--
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG--I----------------PL-- 325 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~----------------~~-- 325 (592)
.++.+++.++++.++++++++++.+... ...+........+++........ . ..
T Consensus 107 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (563)
T PRK06710 107 LYTERELEYQLHDSGAKVILCLDLVFPR------VTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSE 180 (563)
T ss_pred ccCHHHHHHHHhccCCeEEEEeccchhh------hhccchhhccceeEEeccccccccccccccchhhcccccccccccc
Confidence 9999999999999999999998754211 11111111111111110000000 0 00
Q ss_pred ccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhh-hcCCCC-CCEEEEe
Q 007715 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKV-GDVYCWP 403 (592)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~-~d~~l~~ 403 (592)
......|+.+...... ........++++++++|||||||.||||+++|+++......... .++... ++++++.
T Consensus 181 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 255 (563)
T PRK06710 181 SETIHLWNSVEKEVNT-----GVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGV 255 (563)
T ss_pred cchhhhhhhhhhcccc-----ccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEe
Confidence 0000012221111000 00111123578999999999999999999999998754332222 234333 4578889
Q ss_pred cccchhchhH-HHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCC
Q 007715 404 TNLGWVMGPV-ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGET 482 (592)
Q Consensus 404 ~~~~~~~~~~-~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~ 482 (592)
.|+.|..+.. .++.++..|+++++.+ ..++..+++.|+++++|++.++|+++..+.+.......+++++|.+++||++
T Consensus 256 ~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~ 334 (563)
T PRK06710 256 LPFFHVYGMTAVMNLSIMQGYKMVLIP-KFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAP 334 (563)
T ss_pred CchHHHHHHHHHHHHHHHcCCeEEEcC-CCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCc
Confidence 9999988763 4567889999999976 5678899999999999999999999999987654445567899999999999
Q ss_pred CChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE---
Q 007715 483 SNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL--- 558 (592)
Q Consensus 483 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v--- 558 (592)
+++++..++...+ +.+++|.||+||++..............+++|+|++++.++|+| ++++++|.|+. |||++
T Consensus 335 ~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~--Gel~v~g~ 411 (563)
T PRK06710 335 LPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEI--GEIVVKGP 411 (563)
T ss_pred CCHHHHHHHHHhh-CCCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCccCCCCCc--eEEEEecC
Confidence 9999998887766 47899999999998643332222233457899999999999999 78899999995 99999
Q ss_pred --ecccCCCchhhccccccccccccCc
Q 007715 559 --FPLYLGASDRLLNADHEEVYFRGMP 583 (592)
Q Consensus 559 --~~gY~~~~~~~~~~~~~~~~f~~~~ 583 (592)
++||+++++.+......+||.++|-
T Consensus 412 ~~~~gY~~~~~~~~~~~~~g~~~TGD~ 438 (563)
T PRK06710 412 QIMKGYWNKPEETAAVLQDGWLHTGDV 438 (563)
T ss_pred ccchhhhCChHHHhhhcccCcccccce
Confidence 7899999987744333344445543
|
|
| >PRK08974 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=382.11 Aligned_cols=377 Identities=18% Similarity=0.181 Sum_probs=279.8
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
+++|+++|+++.+. .+||.||.++++++|.+|.+ . +++||+|+++++|++++++++|||+++|++++|++
T Consensus 34 ~~~p~~~a~~~~~~--------~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 105 (560)
T PRK08974 34 ARYADQPAFINMGE--------VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNVN 105 (560)
T ss_pred HhCCCCceEEECCc--------cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccC
Confidence 78999999998665 89999999999999999985 7 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCC-------------------CC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI-------------------PL 325 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------~~ 325 (592)
|.++.+++.+++++++++++++++.+. .....+........+.+......... ..
T Consensus 106 ~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PRK08974 106 PLYTPRELEHQLNDSGAKAIVIVSNFA------HTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYH 179 (560)
T ss_pred ccCCHHHHHHHHHhcCceEEEEecccc------HHHHHHhhhcCcceEEEecccccccccccccccchhhhccccccccc
Confidence 999999999999999999999987532 11222211111111111110000000 00
Q ss_pred ccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhc---CCCCCCEEEE
Q 007715 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYCW 402 (592)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~ 402 (592)
.+....+.+....... .........++++++|+|||||||.||||+++|+++...+......+ ....+++++.
T Consensus 180 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08974 180 LPDAISFRSALHKGRR----MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVT 255 (560)
T ss_pred CCCcccHHHHhhccCC----CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEE
Confidence 0011112222221111 01111224578999999999999999999999999877654332222 2344567778
Q ss_pred ecccchhchh-HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecC
Q 007715 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481 (592)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe 481 (592)
..++.|..+. ...+.++..|+++++.....++..+++.++++++|.+..+|++++.|.+.......+++++|.+++||+
T Consensus 256 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 335 (560)
T PRK08974 256 ALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGM 335 (560)
T ss_pred eCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCc
Confidence 8888887775 446677889999888764557788999999999999999999999998765444556789999999999
Q ss_pred CCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE---
Q 007715 482 TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL--- 558 (592)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v--- 558 (592)
++++.+..++.+.+ +++++|.||+||++..++..........+++|+|++|++++|+|++|+++|.|+ +|||++
T Consensus 336 ~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~--~Gel~v~g~ 412 (560)
T PRK08974 336 AVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGE--PGELWVKGP 412 (560)
T ss_pred cCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEECCCCCCCCCCC--ceEEEEecC
Confidence 99999988887765 488999999999986544433322334578999999999999999999999999 499999
Q ss_pred --ecccCCCchhhccccccccccccCcC
Q 007715 559 --FPLYLGASDRLLNADHEEVYFRGMPM 584 (592)
Q Consensus 559 --~~gY~~~~~~~~~~~~~~~~f~~~~~ 584 (592)
++||+++++.+......+||.++|-+
T Consensus 413 ~~~~gy~~~~~~~~~~~~~g~~~TGDl~ 440 (560)
T PRK08974 413 QVMLGYWQRPEATDEVIKDGWLATGDIA 440 (560)
T ss_pred CcchhhcCChhhhhhhhhcCCcccCCEE
Confidence 78999998876433323444455533
|
|
| >PRK07798 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=377.75 Aligned_cols=360 Identities=19% Similarity=0.152 Sum_probs=274.2
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ .+||+||+++++++|+.|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 13 a~~~p~~~a~~~~~~--------~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l~ 84 (533)
T PRK07798 13 ADAVPDRVALVCGDR--------RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNVN 84 (533)
T ss_pred HHhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEecC
Confidence 488999999999766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCc--EEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+.++.+++.+++++++++++++++... .....+....+.. ++.+..... .....+...++++......
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 154 (533)
T PRK07798 85 YRYVEDELRYLLDDSDAVALVYEREFA------PRVAEVLPRLPKLRTLVVVEDGSG---NDLLPGAVDYEDALAAGSP- 154 (533)
T ss_pred cCCCHHHHHHHHhhcCCCEEEEchhhH------HHHHHHhccCCCccEEEEecCCcc---cccCCccccHHHHHhccCC-
Confidence 999999999999999999999987532 1222222222221 222221111 1111134456666554322
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhh---------cCC------CCCCEEEEecccc
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---------IDL------KVGDVYCWPTNLG 407 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~---------~~~------~~~d~~l~~~~~~ 407 (592)
...... ..++.++|+|||||||.||||+++|+++.......... ..+ ..+++++...|+.
T Consensus 155 ----~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 229 (533)
T PRK07798 155 ----ERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLM 229 (533)
T ss_pred ----cCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchh
Confidence 011111 22455799999999999999999999987544332111 111 5678999999999
Q ss_pred hhchhHHHHHHHHcCCEEEEeCC-CCChhhHHHHHHHhCCcEEEccHHHHHH-HHhcCc-CCCCCCccccEEEEecCCCC
Q 007715 408 WVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKA-WRNTNC-LEGLDWTKIRSFASTGETSN 484 (592)
Q Consensus 408 ~~~~~~~~~~~L~~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~-l~~~~~-~~~~~l~sLr~v~~gGe~l~ 484 (592)
|+.+++.++.+|+.|+++++.+. ..++..+++.|+++++|++.++|+.+.. +.+... ....+++++|.+++||++++
T Consensus 230 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~ 309 (533)
T PRK07798 230 HGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFS 309 (533)
T ss_pred hhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCC
Confidence 99999999999999999999873 4578899999999999999999875533 333221 23446789999999999999
Q ss_pred hhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCccc--ccCCCceEEEECCCCCCCCCCCCcceeEEE----
Q 007715 485 VDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS--TATMTAGLVILDECGVPYPDDQPCVGEVGL---- 558 (592)
Q Consensus 485 ~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG--~p~~~~~v~IlD~~g~~vp~G~~giGel~v---- 558 (592)
+++..++.+.+++.++++.||+||++.+...... ....+.| ++.++..++|+|++|+++++|+.|.|+++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~---~~~~~~g~~~~~~~~~~~i~~~~~~~~~~g~~~~g~l~~~~~~ 386 (533)
T PRK07798 310 PSVKEALLELLPNVVLTDSIGSSETGFGGSGTVA---KGAVHTGGPRFTIGPRTVVLDEDGNPVEPGSGEIGWIARRGHI 386 (533)
T ss_pred HHHHHHHHHHcCCCeEEeeecccccccccccCCC---CCCccCCCCccCCCceEEEECCCCCCCCCCCCCeeEEEeecCc
Confidence 9999999988877889999999998654332211 1122344 889999999999999999999865577776
Q ss_pred ecccCCCchhhcc
Q 007715 559 FPLYLGASDRLLN 571 (592)
Q Consensus 559 ~~gY~~~~~~~~~ 571 (592)
..||+++++.+..
T Consensus 387 ~~gy~~~~~~t~~ 399 (533)
T PRK07798 387 PLGYYKDPEKTAE 399 (533)
T ss_pred cccccCChhhhHH
Confidence 6799999987643
|
|
| >PRK06178 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=380.69 Aligned_cols=379 Identities=19% Similarity=0.180 Sum_probs=281.1
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+||++|+.+.+. .+||.||+++++++|++|.+. +++|++|+++++|++++++++|||+++|++++|++|
T Consensus 44 ~~~p~~~al~~~~~--------~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~p 115 (567)
T PRK06178 44 RERPQRPAIIFYGH--------VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVPVSP 115 (567)
T ss_pred HHCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEeecCC
Confidence 67899999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcC-CCCCC---CCCCcc-------CcccHHH
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPA-IGNDV---GIPLRE-------QDLSWKD 334 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~---~~~~~~-------~~~~~~~ 334 (592)
.++.+++.+++++++++++++++... +.+..+.+......+++.. .+... ...... ....+.+
T Consensus 116 ~~~~~~~~~~l~~~~~~~ii~~~~~~------~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (567)
T PRK06178 116 LFREHELSYELNDAGAEVLLALDQLA------PVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAID 189 (567)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchH------HHHHHhhccCCcceEEEecccccccccccccccccccccccccccccc
Confidence 99999999999999999999987532 1222222222222222211 11000 000000 0011222
Q ss_pred hhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhh-hcCCCCCCEEEEecccchhchh-
Q 007715 335 FLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKVGDVYCWPTNLGWVMGP- 412 (592)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~- 412 (592)
+...... ...........++++|+|+|||||||.||||+++|++++........ ...+.++|+++...|++|..+.
T Consensus 190 ~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~ 267 (567)
T PRK06178 190 LLPALRA--CTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAGEN 267 (567)
T ss_pred HHHHhhc--cccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHHHH
Confidence 2221111 00111122345789999999999999999999999998765544322 3567889999999999998887
Q ss_pred HHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEE--ecCCCChhhHHH
Q 007715 413 VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS--TGETSNVDDDLW 490 (592)
Q Consensus 413 ~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~--gGe~l~~~~~~~ 490 (592)
..++.++.+|+++++.+ .+++..++..|+++++|.+..+|..+..+.+.......++++++.+.. +|+.+++++.++
T Consensus 268 ~~~~~~l~~G~~~~l~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 346 (567)
T PRK06178 268 FGLLFPLFSGATLVLLA-RWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQR 346 (567)
T ss_pred HHHHHHHHcCceEEEeC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHH
Confidence 46788999999999987 578899999999999999999999999988765444556788887654 458999999988
Q ss_pred HHHhccCCceeccccchhcccccccCCcC--C----CCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----
Q 007715 491 LSSKAWYNAIIESCGGTELSSAYIQGSLL--Q----PQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL----- 558 (592)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~----~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v----- 558 (592)
+...++...+.+.||+||++......... . ...++++|+|++|++++|+| ++++++|.|+ +|||++
T Consensus 347 ~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~--~Gel~v~g~~v 424 (567)
T PRK06178 347 WRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGA--EGEIVVRTPSL 424 (567)
T ss_pred HHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCC--ceEEEEECCcc
Confidence 88777644445689999987543322111 1 12456799999999999999 7799999999 499998
Q ss_pred ecccCCCchhhccccccccccccCcC
Q 007715 559 FPLYLGASDRLLNADHEEVYFRGMPM 584 (592)
Q Consensus 559 ~~gY~~~~~~~~~~~~~~~~f~~~~~ 584 (592)
+.||+++++.+......+||.++|-+
T Consensus 425 ~~gY~~~~~~~~~~~~dg~~~TGDl~ 450 (567)
T PRK06178 425 LKGYWNKPEATAEALRDGWLHTGDIG 450 (567)
T ss_pred cccccCChhhhhhcccCCceeecceE
Confidence 78999999876443333344445433
|
|
| >PRK08279 long-chain-acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=382.26 Aligned_cols=354 Identities=17% Similarity=0.152 Sum_probs=265.6
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ .+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 47 a~~~p~~~Ai~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~ 118 (600)
T PRK08279 47 AARHPDRPALLFEDQ--------SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLN 118 (600)
T ss_pred HHhCCCCcEEEeCCC--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecC
Confidence 378999999999876 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
+.++.+++.+++++++++++|++++.. +....+...... ..+++...... .....|.++........
T Consensus 119 ~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 186 (600)
T PRK08279 119 TQQRGAVLAHSLNLVDAKHLIVGEELV------EAFEEARADLARPPRLWVAGGDTL------DDPEGYEDLAAAAAGAP 186 (600)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHH------HHHHHHhhhhcccceEEEecCccc------cccccHHHHhhhcccCC
Confidence 999999999999999999999987532 222222222222 22222211100 00122334332221100
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHH-HHHHHHcC
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNG 422 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G 422 (592)
...........++++++|+|||||||.||||+++|+++.+.+.+....++++++|++++..|++|..++.. ++.++..|
T Consensus 187 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G 266 (600)
T PRK08279 187 TTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAG 266 (600)
T ss_pred ccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcC
Confidence 10111123345689999999999999999999999999998888777889999999999999999999854 45567778
Q ss_pred CEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceec
Q 007715 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (592)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (592)
+++++.+ .+++..+++.|+++++|++.++|++++.+.+..........++|.+ +|+.+++++++++...++...++|
T Consensus 267 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~ 343 (600)
T PRK08279 267 ATLALRR-KFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE 343 (600)
T ss_pred cEEEEcC-CCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeee
Confidence 8777765 6788899999999999999999999999987644333344567754 477899999999988887557999
Q ss_pred cccchhcccccccCCcCCCCccCcccccCC----Cce---------EEEECCCC--CCCCCCCCcceeEE--E-----ec
Q 007715 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATM----TAG---------LVILDECG--VPYPDDQPCVGEVG--L-----FP 560 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~----~~~---------v~IlD~~g--~~vp~G~~giGel~--v-----~~ 560 (592)
.||+||++..+.. . .....++|++.+ +.. ..|.|.++ .++++|+. ||++ | +.
T Consensus 344 ~YG~tE~~~~~~~--~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~--Gel~~~i~~~~~~~ 417 (600)
T PRK08279 344 FYAASEGNVGFIN--V--FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEV--GLLIGRITDRGPFD 417 (600)
T ss_pred eecccccceeecc--c--CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCc--eeEEEEecCccccc
Confidence 9999998753321 1 223456777665 332 33444443 36788884 9997 3 78
Q ss_pred ccCCCchhh
Q 007715 561 LYLGASDRL 569 (592)
Q Consensus 561 gY~~~~~~~ 569 (592)
|| ++++.+
T Consensus 418 GY-~~~~~t 425 (600)
T PRK08279 418 GY-TDPEAS 425 (600)
T ss_pred cc-CCchhh
Confidence 99 888765
|
|
| >PRK07867 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-42 Score=372.74 Aligned_cols=352 Identities=18% Similarity=0.154 Sum_probs=271.8
Q ss_pred CCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC
Q 007715 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (592)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~ 266 (592)
.+|++|+++.+. .+||+||.++++++|++|+++ ++++++|+++++|++++++++|||+++|++++|+++.
T Consensus 16 ~~~~~a~~~~~~--------~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 87 (529)
T PRK07867 16 EDDDRGLYFEDS--------FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPT 87 (529)
T ss_pred ccCCceEEECCc--------EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCC
Confidence 378999998766 999999999999999999996 8999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCC
Q 007715 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (592)
Q Consensus 267 ~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (592)
++.+++.+++++++++++|+++.... ....+ .....++... ...|.+++..... .
T Consensus 88 ~~~~~l~~~l~~~~~~~li~~~~~~~------~~~~~----~~~~~~~~~~-----------~~~~~~~l~~~~~----~ 142 (529)
T PRK07867 88 RRGAALARDIAHADCQLVLTESAHAE------LLDGL----DPGVRVINVD-----------SPAWADELAAHRD----A 142 (529)
T ss_pred CChHHHHHHHHhCCCeEEEECHhHHH------HHHhh----ccCceEEEec-----------cccHHHHhcccCC----C
Confidence 99999999999999999999986421 11111 1111122110 1124444332211 1
Q ss_pred CCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhH-HHHHHHHcCCEE
Q 007715 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGATL 425 (592)
Q Consensus 347 ~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~~l 425 (592)
........++++++|+|||||||.||||+++|+++..........++++++|+++...|++|..+++ .++.++..|+++
T Consensus 143 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 222 (529)
T PRK07867 143 EPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASI 222 (529)
T ss_pred CCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceE
Confidence 1122234678999999999999999999999999988877777788899999999999999998874 466789999999
Q ss_pred EEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecccc
Q 007715 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (592)
Q Consensus 426 vl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (592)
++.+ ..++..+++.++++++|++.++|+.+..++..........+++|. ++||+++++.. .++...+ +++++|.||
T Consensus 223 ~~~~-~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG 298 (529)
T PRK07867 223 ALRR-KFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFG 298 (529)
T ss_pred EecC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeec
Confidence 8876 568889999999999999999999999988754332233467884 56888887764 4555555 478999999
Q ss_pred chhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCC------------CcceeEEE------ecccCCCc
Q 007715 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQ------------PCVGEVGL------FPLYLGAS 566 (592)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~------------~giGel~v------~~gY~~~~ 566 (592)
+||+++.... .. ....+++|+|+++ ++|+| +++++++.|+ . |||++ +.||+++|
T Consensus 299 ~TE~~~~~~~-~~--~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~--Gel~i~~g~~~~~gy~~~~ 371 (529)
T PRK07867 299 STEGGVAITR-TP--DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAI--GELVNTAGPGGFEGYYNDP 371 (529)
T ss_pred cccccccccc-CC--CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcc--eEEEEecCCcccccccCCh
Confidence 9999754322 11 2345689999999 78888 6789999987 5 99987 68999999
Q ss_pred hhhccccccccccccCcC
Q 007715 567 DRLLNADHEEVYFRGMPM 584 (592)
Q Consensus 567 ~~~~~~~~~~~~f~~~~~ 584 (592)
+.+......+||.++|-+
T Consensus 372 ~~~~~~~~~g~~~TGD~~ 389 (529)
T PRK07867 372 EADAERMRGGVYWSGDLA 389 (529)
T ss_pred HhhhhhhcCCeEeeccEE
Confidence 976433333444455533
|
|
| >PRK12406 long-chain-fatty-acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=370.34 Aligned_cols=361 Identities=19% Similarity=0.161 Sum_probs=273.7
Q ss_pred eEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHH
Q 007715 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAARE 271 (592)
Q Consensus 193 ~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~ 271 (592)
.|++..++ .+||.||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.++
T Consensus 3 ~~~~~~~~--------~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 74 (509)
T PRK12406 3 ATIISGDR--------RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEE 74 (509)
T ss_pred eEEEECCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHH
Confidence 46666665 999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCC--C-------CC-CCCCccCcccHHHhhccCCC
Q 007715 272 IATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG--N-------DV-GIPLREQDLSWKDFLSSVDY 341 (592)
Q Consensus 272 l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~-------~~-~~~~~~~~~~~~~~~~~~~~ 341 (592)
+.++++++++++++++.... ..+.+..+..+..+.... . .. ..........|++.......
T Consensus 75 ~~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (509)
T PRK12406 75 IAYILEDSGARVLIAHADLL---------HGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP 145 (509)
T ss_pred HHHHHhccCCcEEEEccchh---------hhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCc
Confidence 99999999999999987532 111111111111110000 0 00 00011233445554432111
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHH---HHHHhhhhcCCCCCCEEEEecccchhchhHHHHHH
Q 007715 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (592)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (592)
.....++++++++|||||||.||||+++|.+..+ ........+++.++++++...|++|..+....+.+
T Consensus 146 --------~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~ 217 (509)
T PRK12406 146 --------YDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRA 217 (509)
T ss_pred --------cCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHH
Confidence 1123468999999999999999999998765433 23333456788999999999999998887666678
Q ss_pred HHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhcc
Q 007715 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW 496 (592)
Q Consensus 419 L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~ 496 (592)
+..|+++++.+ ..++..+++.++++++|++..+|+++..|++... ....+++++|.+++||+++++++..++.+.++
T Consensus 218 ~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~ 296 (509)
T PRK12406 218 GRLGGVLVLQP-RFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWG 296 (509)
T ss_pred HhhheEEEEcc-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcC
Confidence 89999999876 5688999999999999999999999999986532 23456789999999999999999998887765
Q ss_pred CCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----e-cccCCCchhhc
Q 007715 497 YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----F-PLYLGASDRLL 570 (592)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~-~gY~~~~~~~~ 570 (592)
+.++|.||+||++.+...........++++|+|+++++++|+|+++++++.|++ |||++ . .||+++|+.+.
T Consensus 297 -~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~~~y~~~~~~~~ 373 (509)
T PRK12406 297 -PVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQGEI--GEIYSRIAGNPDFTYHNKPEKRA 373 (509)
T ss_pred -CcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCCCc--eEEEEECCccccccccCCchhcc
Confidence 789999999999864433222223355789999999999999999999999985 99998 2 38999888664
Q ss_pred cccccccccccC
Q 007715 571 NADHEEVYFRGM 582 (592)
Q Consensus 571 ~~~~~~~~f~~~ 582 (592)
.....+||.++|
T Consensus 374 ~~~~~~~~~TGD 385 (509)
T PRK12406 374 EIDRGGFITSGD 385 (509)
T ss_pred cccCCCCeEEcc
Confidence 333333343444
|
|
| >PRK13391 acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=371.06 Aligned_cols=368 Identities=19% Similarity=0.174 Sum_probs=280.0
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+.+ +.+||+||.++++++|++|++. +++|++|+++++|++++++++|||+++|++++|++
T Consensus 7 a~~~p~~~a~~~~~~~------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 7 AQTTPDKPAVIMASTG------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVN 80 (511)
T ss_pred HhhCCCceEEEecCCC------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccc
Confidence 4789999999974221 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+.++.+++.+++++++++++++++... .....+....+. ..+++...... .....+++.......
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~- 147 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKL------DVARALLKQCPGVRHRLVLDGDGEL------EGFVGYAEAVAGLPA- 147 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhH------HHHHHHHhcCCCceEEEEecCCCCC------cccccHHHHhcCCCC-
Confidence 999999999999999999999987532 111222222222 12222211110 112233433321111
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeC--CchHHH---HHHHhhhhcCCCCCCEEEEecccchhchhHHHHH
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT--QLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~s--h~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (592)
......++.++++|||||||.||||+++ |.++.. ........+.+.+++++++..|++|..++...+.
T Consensus 148 -------~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~ 220 (511)
T PRK13391 148 -------TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVML 220 (511)
T ss_pred -------CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHH
Confidence 0111234679999999999999999964 665432 2233445567788999999999999988877788
Q ss_pred HHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhc
Q 007715 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (592)
Q Consensus 418 ~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~ 495 (592)
++..|+++++.+ ..++..+++.++++++|++.++|+++..+.+... ....+++++|.+++||+++++++.+++.+.+
T Consensus 221 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~ 299 (511)
T PRK13391 221 VIRLGGTVIVME-HFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW 299 (511)
T ss_pred HHHcCceEEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc
Confidence 999999999986 5688999999999999999999999998876432 2234578999999999999999999888766
Q ss_pred cCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE----ecccCCCchhhcc
Q 007715 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL----FPLYLGASDRLLN 571 (592)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v----~~gY~~~~~~~~~ 571 (592)
+ .++++.||+||++.+............+++|+|+++ .++|+|++|++++.|+. |||++ ..||+++++.+..
T Consensus 300 g-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~--Gel~~~g~~~~gy~~~~~~~~~ 375 (511)
T PRK13391 300 G-PIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPGEP--GTIWFEGGRPFEYLNDPAKTAE 375 (511)
T ss_pred C-CceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCcceEEcCChhHhHH
Confidence 5 789999999999864333222223456799999999 69999999999999995 99999 6799999987754
Q ss_pred cccc--ccccccCcC
Q 007715 572 ADHE--EVYFRGMPM 584 (592)
Q Consensus 572 ~~~~--~~~f~~~~~ 584 (592)
.... .||.+||-+
T Consensus 376 ~~~~~~~w~~TGD~g 390 (511)
T PRK13391 376 ARHPDGTWSTVGDIG 390 (511)
T ss_pred hhccCCCEEecCCEE
Confidence 4332 344455533
|
|
| >TIGR01733 AA-adenyl-dom amino acid adenylation domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-42 Score=361.26 Aligned_cols=328 Identities=20% Similarity=0.174 Sum_probs=267.7
Q ss_pred cHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEec
Q 007715 211 TYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (592)
Q Consensus 211 Ty~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~ 288 (592)
||.||.+.++++|+.|.+ . +++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999999 7 99999999999999999999999999999999999999999999999999999999987
Q ss_pred ceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCC
Q 007715 289 FILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTT 368 (592)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTT 368 (592)
......+. .......+.. .+......... .........++++++++||||||
T Consensus 81 ~~~~~~~~----------~~~~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTt 132 (408)
T TIGR01733 81 ALASRLAG----------LVLPIILVDP--------------LELAALDDAPA----PPPPDAPSGPDDLAYVIYTSGST 132 (408)
T ss_pred chhhhccc----------cCCceEEech--------------hhhhhcccccc----cccccCCCCCCCcEEEEEcCCCC
Confidence 64211110 0111111110 00111110000 00011113468999999999999
Q ss_pred CCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCCCC--hhhHHHHHHHhCC
Q 007715 369 GEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL--ERSFGKFVQDAGV 446 (592)
Q Consensus 369 G~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~--~~~l~~~i~~~~v 446 (592)
|.||+|.++|+++..........+.++++|+++...+++|..+++.++.++..|+++++.+.... +..+.+.++++++
T Consensus 133 G~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (408)
T TIGR01733 133 GRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPV 212 (408)
T ss_pred CCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCc
Confidence 99999999999999888887778889999999999999999999889999999999999875443 6788999999999
Q ss_pred cEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCc--CCCC--
Q 007715 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL--LQPQ-- 522 (592)
Q Consensus 447 t~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~--~~~~-- 522 (592)
|.+.++|++++.|.+... ..+++||.+++||+++++++.+++.+.++++.+++.||+||++.++..... ....
T Consensus 213 t~l~~~p~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~ 289 (408)
T TIGR01733 213 TVLNLTPSLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRE 289 (408)
T ss_pred eEEEeCHHHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCc
Confidence 999999999999988654 457899999999999999999999988877889999999999865432111 1111
Q ss_pred ccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 523 AFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 523 ~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
+..++|+|+++++++|+|+++++++.|+. |||+| +.||+++++.+..
T Consensus 290 ~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~~~~~~ 341 (408)
T TIGR01733 290 SPVPIGRPLANTRLYVLDDDLRPVPVGVV--GELYIGGPGVARGYLNRPELTAE 341 (408)
T ss_pred cccccCcccCCceEEEECCCCCCCCCCCc--eEEEecCccccccccCChhhhhc
Confidence 26789999999999999999999999984 99999 7899999987633
|
This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group. |
| >PLN02479 acetate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-42 Score=375.95 Aligned_cols=377 Identities=17% Similarity=0.171 Sum_probs=274.5
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++.+|+++|+++.+. ++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 30 ~~~~p~~~a~~~~~~--------~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 101 (567)
T PLN02479 30 AVVHPTRKSVVHGSV--------RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVN 101 (567)
T ss_pred HhhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEec
Confidence 368999999998665 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhc--------C-CCcEEEEcCCCCCC---CCCCccCcccH
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--------A-PLKAIVLPAIGNDV---GIPLREQDLSW 332 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~i~~~~~~~---~~~~~~~~~~~ 332 (592)
+.++.+++.+++++++++++++++.+.. ....+... . ...++++....... ......+...|
T Consensus 102 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
T PLN02479 102 IRLNAPTIAFLLEHSKSEVVMVDQEFFT------LAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEY 175 (567)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhhh------HHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccH
Confidence 9999999999999999999999876421 11111111 1 11233332111000 00011233456
Q ss_pred HHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh
Q 007715 333 KDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP 412 (592)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 412 (592)
++++..... . .........+++++++|||||||.||||+++|+++..........++++.++++++..|++|..++
T Consensus 176 ~~~~~~~~~---~-~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~ 251 (567)
T PLN02479 176 EKFLETGDP---E-FAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGW 251 (567)
T ss_pred HHHHhcccc---c-cccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhH
Confidence 666543221 0 000112233567889999999999999999999986655555556778899999999999998886
Q ss_pred HHHHH-HHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCC-CCCccccEEEEecCCCChhhHHH
Q 007715 413 VILFS-SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG-LDWTKIRSFASTGETSNVDDDLW 490 (592)
Q Consensus 413 ~~~~~-~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~-~~l~sLr~v~~gGe~l~~~~~~~ 490 (592)
...+. ++..|.++++ . .+++..+++.++++++|++..+|+++..|.+...... .+++++|.++++|+++++++.++
T Consensus 252 ~~~~~~~~~~g~~~~~-~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~ 329 (567)
T PLN02479 252 CFTWTLAALCGTNICL-R-QVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFA 329 (567)
T ss_pred HHHHHHHhhcCceEec-c-CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHH
Confidence 44433 4555555544 3 4688999999999999999999999999987643222 25789999999999999999888
Q ss_pred HHHhccCCceeccccchhcccccccCCcC---------C-CCccCcccccCCCce-EEEEC-CCCCCCCCCCCcceeEEE
Q 007715 491 LSSKAWYNAIIESCGGTELSSAYIQGSLL---------Q-PQAFGAFSTATMTAG-LVILD-ECGVPYPDDQPCVGEVGL 558 (592)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---------~-~~~~~~iG~p~~~~~-v~IlD-~~g~~vp~G~~giGel~v 558 (592)
+... +.++++.||+||+++.++..... . .....+.|.|.+|.. ++|+| ++++++|.+...+|||++
T Consensus 330 ~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v 407 (567)
T PLN02479 330 MSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVM 407 (567)
T ss_pred HHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEE
Confidence 7754 47899999999985432221100 0 011246788988886 89999 678999875111599999
Q ss_pred -----ecccCCCchhhccccccccccccCcC
Q 007715 559 -----FPLYLGASDRLLNADHEEVYFRGMPM 584 (592)
Q Consensus 559 -----~~gY~~~~~~~~~~~~~~~~f~~~~~ 584 (592)
++||+++|+.+.......||.+||-+
T Consensus 408 ~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~ 438 (567)
T PLN02479 408 RGNMVMKGYLKNPKANEEAFANGWFHSGDLG 438 (567)
T ss_pred eccchhhhhhcCcccccchhcCCceecceeE
Confidence 78999999987544434444455543
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=392.46 Aligned_cols=351 Identities=15% Similarity=0.119 Sum_probs=256.9
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+++++||++|+++.++ .+||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 456 ~a~~~pd~~Al~~~~~--------~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl 527 (994)
T PRK07868 456 QARDAPKGEFLLFDGR--------VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLM 527 (994)
T ss_pred HHHHCCCCeEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 4588999999998776 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCc--cCcccHHHhhccCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLR--EQDLSWKDFLSSVDY 341 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 341 (592)
||. +++.++++++++++||+++... ..+.+ ....++++... ........ .....++++......
T Consensus 528 ~p~---~~l~~il~~s~~~~li~~~~~~---------~~~~~-~~~~iiv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (994)
T PRK07868 528 PPD---TDLAAAVRLGGVTEIITDPTNL---------EAARQ-LPGRVLVLGGG-ESRDLDLPDDADVIDMEKIDPDAVE 593 (994)
T ss_pred CCc---hhHHHHHhccCCeEEEEChHHH---------HHHHh-cCceEEEecCC-ccccccCCcchhhhhhhhcCccccc
Confidence 985 6899999999999999986532 11111 22333333211 00000000 001112111110000
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHc
Q 007715 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (592)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (592)
.+.........++|+|||+|| ||||+||+++++|.+...........++++++|++++.+|++|+.+++..+.+++.
T Consensus 594 --~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~ 670 (994)
T PRK07868 594 --LPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVV 670 (994)
T ss_pred --CCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhc
Confidence 000001112236899999998 57777777777876654444444456788899999999999999999776666666
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|++.+++...+++..+++.|++++||++.++|++++.|++.......++++||.++ |+.+++++++++.+.++.++++
T Consensus 671 gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~ 748 (994)
T PRK07868 671 GGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVV 748 (994)
T ss_pred cceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchhee
Confidence 66665555567899999999999999999999999999876544445678999876 3348999999999888778899
Q ss_pred ccccchhcccccccCCcCCCCccCcccccCCCc-eEEEE-----------CCCC--CCCCCCCCcceeEEE-ecccCCCc
Q 007715 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA-GLVIL-----------DECG--VPYPDDQPCVGEVGL-FPLYLGAS 566 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~-~v~Il-----------D~~g--~~vp~G~~giGel~v-~~gY~~~~ 566 (592)
|.||+||+++.. ... ...+.+++|+|++|+ +++|. |++| +++++|++ |||++ +++|++ |
T Consensus 749 ~~YG~TE~~~~~-~~~--~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~--Gel~~~~~~~~~-p 822 (994)
T PRK07868 749 EFFATTDGQAVL-ANV--SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEV--GVLLARARGPID-P 822 (994)
T ss_pred eeeecccccccc-ccc--CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCc--eEEEEecCCCCC-h
Confidence 999999987532 211 224567999999998 66653 5667 67889995 99999 666764 5
Q ss_pred hh
Q 007715 567 DR 568 (592)
Q Consensus 567 ~~ 568 (592)
+.
T Consensus 823 ~~ 824 (994)
T PRK07868 823 TA 824 (994)
T ss_pred hh
Confidence 43
|
|
| >PRK08276 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=364.86 Aligned_cols=348 Identities=20% Similarity=0.122 Sum_probs=267.7
Q ss_pred EecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEe
Q 007715 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287 (592)
Q Consensus 209 ~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~ 287 (592)
.+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++++++++++++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999998
Q ss_pred cceeccCccccchhhHhhcCC--CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCC
Q 007715 288 DFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSS 365 (592)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTS 365 (592)
+... .....+.+..+ ...+.+... . ......|++....... ......++.++++|||
T Consensus 91 ~~~~------~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~--------~~~~~~~~~a~i~~TS 149 (502)
T PRK08276 91 AALA------DTAAELAAELPAGVPLLLVVAG-P------VPGFRSYEEALAAQPD--------TPIADETAGADMLYSS 149 (502)
T ss_pred cchh------hHHHHHhhhccccccEEEEeCC-C------CCccccHHHHHhcCCC--------CCCCCCCcceEEEECC
Confidence 7542 12222222222 112222110 0 0122335544332111 1112346789999999
Q ss_pred CCCCCCcEEEeCCchHHHHH------HHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCCCChhhHHH
Q 007715 366 GTTGEPKAIPWTQLSSIRCT------AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK 439 (592)
Q Consensus 366 GTTG~PKgV~~sh~~l~~~~------~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~ 439 (592)
||||.||||+++|.++.... ......+....++++++..|++|..++...+.++..|+++++.+ ..++..+++
T Consensus 150 GtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~ 228 (502)
T PRK08276 150 GTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVME-KFDAEEALA 228 (502)
T ss_pred CCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcC-CCCHHHHHH
Confidence 99999999999988754221 22222223357789999999999888866678999999998876 568899999
Q ss_pred HHHHhCCcEEEccHHHHHHHHhcCcC--CCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCC
Q 007715 440 FVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGS 517 (592)
Q Consensus 440 ~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 517 (592)
.++++++|++.++|+++..+.+.... ...+++++|.+++||++++.++.+++.+.++ .++++.||+||++.++....
T Consensus 229 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~-~~~~~~yG~tE~~~~~~~~~ 307 (502)
T PRK08276 229 LIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG-PIIHEYYASSEGGGVTVITS 307 (502)
T ss_pred HHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhC-cHhhhhcccccccceeEecC
Confidence 99999999999999999999876432 3456889999999999999999999888764 67999999999986433322
Q ss_pred cCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccccc-ccC
Q 007715 518 LLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF-RGM 582 (592)
Q Consensus 518 ~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f-~~~ 582 (592)
.......+++|+|+ ++.++|+|+++++++.|+. |||++ +.||+++++.+......+.|| ++|
T Consensus 308 ~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD 375 (502)
T PRK08276 308 EDWLAHPGSVGKAV-LGEVRILDEDGNELPPGEI--GTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGD 375 (502)
T ss_pred ccccccCCCcceec-ccEEEEECCCCCCCcCCCc--eEEEEECCCccchhcCCHHHHHHHhcCCCceeecc
Confidence 22234457899999 8899999999999999984 99999 679999998875554442444 444
|
|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=401.56 Aligned_cols=350 Identities=18% Similarity=0.195 Sum_probs=268.4
Q ss_pred CCCC-CceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 187 RKED-NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 187 ~~~p-d~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
+++| ++.|+.+.+. +++||+||+++++++|+.|+ . +++||+|+++++|++++++++|||+++|++++|+|
T Consensus 642 ~~~~~~~~ai~~~~~-------~~~Ty~el~~~~~~lA~~L~-~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 713 (1140)
T PRK06814 642 KIHGFKKLAVEDPVN-------GPLTYRKLLTGAFVLGRKLK-KNTPPGENVGVMLPNANGAAVTFFALQSAGRVPAMIN 713 (1140)
T ss_pred HHcCCCCeEeECCCC-------CccCHHHHHHHHHHHHHHHH-hcCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcC
Confidence 4554 6788876332 28999999999999999996 6 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC--CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
|.++.+++.+++++++++++++++.+....+ .....+..+ ..++.++..... . .....+++.......
T Consensus 714 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~--~---~~~~~~~~~~~~~~~- 783 (1140)
T PRK06814 714 FSAGIANILSACKAAQVKTVLTSRAFIEKAR----LGPLIEALEFGIRIIYLEDVRAQ--I---GLADKIKGLLAGRFP- 783 (1140)
T ss_pred CCCCHHHHHHHHHHcCCCEEEecHHHHhhhc----chhHHHHhccCceEEEehHhhcc--C---ChHHHHHHHhhccCC-
Confidence 9999999999999999999999875432111 111111111 122222211000 0 000011111111110
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHc
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLN 421 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~ 421 (592)
........++|++||+|||||||.||||+++|+++.+.+......++++++|++++..|+.|..+. +.++.++..
T Consensus 784 ----~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 859 (1140)
T PRK06814 784 ----LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLS 859 (1140)
T ss_pred ----ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHc
Confidence 001113467999999999999999999999999998888877778889999999999999999887 678899999
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|+++++.+...+...+.+.++++++|++..+|+++..+.+.. ...+++++|.+++|||++++++.+++.+.++ ++++
T Consensus 860 G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~-~~~~ 936 (1140)
T PRK06814 860 GVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKFG-IRIL 936 (1140)
T ss_pred CCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHhC-CcEE
Confidence 999999875556677889999999999999999999987653 3456789999999999999999988887764 7899
Q ss_pred ccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchh
Q 007715 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDR 568 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~ 568 (592)
|.||+||++..+.... ....+.+++|+|++|+++++.|..+ .|+ .|||++ +.||+++++.
T Consensus 937 ~~YG~TE~~~~~~~~~-~~~~~~~~vG~p~~g~~~~~~~~~~----~~~--~Gel~v~g~~~~~gY~~~~~~ 1001 (1140)
T PRK06814 937 EGYGVTETAPVIALNT-PMHNKAGTVGRLLPGIEYRLEPVPG----IDE--GGRLFVRGPNVMLGYLRAENP 1001 (1140)
T ss_pred eccccccccceEEecC-CCCCCCCcCCccCCCCeEEEeecCC----CCC--ceEEEEeCCCcchhhcCCCCC
Confidence 9999999986543322 2234567999999999999987543 355 499998 7899987653
|
|
| >PRK08162 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=365.59 Aligned_cols=375 Identities=17% Similarity=0.159 Sum_probs=271.4
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+|+++|+++.+. .+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+++
T Consensus 29 ~~~~~~~a~~~~~~--------~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~~ 100 (545)
T PRK08162 29 EVYPDRPAVIHGDR--------RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLNT 100 (545)
T ss_pred HHCCCCeEEEECCe--------EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEecccc
Confidence 78999999998766 899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
.++.+++.+++++++++++++++.+. ..........+. ..+++.............+..+++++......
T Consensus 101 ~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 171 (545)
T PRK08162 101 RLDAASIAFMLRHGEAKVLIVDTEFA------EVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDP--- 171 (545)
T ss_pred ccChHHHHHHHHhCCCeEEEEccchh------hHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCc---
Confidence 99999999999999999999998642 122222222222 13333321110000000122345555443211
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCE
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (592)
..........+++++|+|||||||.||||+++|+++..........+.+..++++++..|+.|..+....+...+.|++
T Consensus 172 -~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g~ 250 (545)
T PRK08162 172 -DFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAARAGT 250 (545)
T ss_pred -cccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHHccE
Confidence 0011112234579999999999999999999999876655544556678888999999999998887444444455666
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 425 lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
.++.. ..++..+++.|+++++|++.++|+++..|++........+.+++.++++|++++.++.+++... ++++++.|
T Consensus 251 ~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~Y 327 (545)
T PRK08162 251 NVCLR-KVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVY 327 (545)
T ss_pred EEEeC-CCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeecc
Confidence 66554 5788999999999999999999999999987654333345566777899999999888877654 57899999
Q ss_pred cchhcccccccCCcC----------CCCccCcccccCC-CceEEEEC-CCCCCCCCC-CCcceeEEE-----ecccCCCc
Q 007715 505 GGTELSSAYIQGSLL----------QPQAFGAFSTATM-TAGLVILD-ECGVPYPDD-QPCVGEVGL-----FPLYLGAS 566 (592)
Q Consensus 505 G~TE~~~~~~~~~~~----------~~~~~~~iG~p~~-~~~v~IlD-~~g~~vp~G-~~giGel~v-----~~gY~~~~ 566 (592)
|+||+++.+...... ......+.|.+++ +..++|+| ++++++|.+ +. +|||+| +.||++++
T Consensus 328 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~-~Gel~v~g~~~~~gY~~~~ 406 (545)
T PRK08162 328 GLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGET-IGEIMFRGNIVMKGYLKNP 406 (545)
T ss_pred cccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCc-eeEEEEecCcchhhhcCCh
Confidence 999986433322110 0112345677765 34688999 578999863 32 599999 67999999
Q ss_pred hhhccccccccccccCc
Q 007715 567 DRLLNADHEEVYFRGMP 583 (592)
Q Consensus 567 ~~~~~~~~~~~~f~~~~ 583 (592)
+.+.......||-++|-
T Consensus 407 ~~~~~~~~~g~~~TGDl 423 (545)
T PRK08162 407 KATEEAFAGGWFHTGDL 423 (545)
T ss_pred hhhHHHhhCCCcccCce
Confidence 97744433333334443
|
|
| >PRK09192 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=369.81 Aligned_cols=362 Identities=17% Similarity=0.131 Sum_probs=265.4
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+.+|+.+ ++..++ ...+.+||.||+++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|+|+
T Consensus 32 ~~~~~~~-~~~~~~----~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~ 106 (579)
T PRK09192 32 LGEAGMN-FYDRRG----QLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPL 106 (579)
T ss_pred ccCCceE-EEecCC----CEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccC
Confidence 4566544 443222 2346899999999999999999999 999999999999999999999999999999999987
Q ss_pred CCC-------HHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhcc
Q 007715 266 SFA-------AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (592)
Q Consensus 266 ~~~-------~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (592)
.++ .+++.+++++++++++|+++... +.......... ... ...+.++...
T Consensus 107 ~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~------~~~~~~~~~~~-~~~----------------~~~~~~~~~~ 163 (579)
T PRK09192 107 PMGFGGRESYIAQLRGMLASAQPAAIITPDELL------PWVNEATHGNP-LLH----------------VLSHAWFKAL 163 (579)
T ss_pred CcccccchHHHHHHHHHHHhcCCCEEEeChHHH------HHHHHhhcccc-ccc----------------eeehhhhccc
Confidence 543 68999999999999999987531 11111110100 001 1122222221
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhh-hcCCCCCCEEEEecccchhchhHH-HH
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKVGDVYCWPTNLGWVMGPVI-LF 416 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~-~~ 416 (592)
... ........+++++||+|||||||.||||+++|++++..+..... .+++.++|+++...|++|+.++.. ++
T Consensus 164 ~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~ 238 (579)
T PRK09192 164 PEA-----DVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLL 238 (579)
T ss_pred CCC-----ccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHH
Confidence 111 01112345689999999999999999999999999887776666 788999999999999999999854 66
Q ss_pred HHHHcCCEEEEeCC-C--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc---CCCCCCccccEEEEecCCCChhhHHH
Q 007715 417 SSFLNGATLALYQG-S--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC---LEGLDWTKIRSFASTGETSNVDDDLW 490 (592)
Q Consensus 417 ~~L~~G~~lvl~~~-~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~---~~~~~l~sLr~v~~gGe~l~~~~~~~ 490 (592)
.++..|+++++.+. . .++..+++.++++++|++..+|.++..+..... ....+++++|.+++||+++++.+.+.
T Consensus 239 ~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~ 318 (579)
T PRK09192 239 TPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQ 318 (579)
T ss_pred HHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHH
Confidence 77899999987652 1 257789999999999987766655555443221 22356889999999999999999888
Q ss_pred HHHhccC-----CceeccccchhcccccccCCcCC---------------------------CCccCcccccCCCceEEE
Q 007715 491 LSSKAWY-----NAIIESCGGTELSSAYIQGSLLQ---------------------------PQAFGAFSTATMTAGLVI 538 (592)
Q Consensus 491 ~~~~~~~-----~~l~n~YG~TE~~~~~~~~~~~~---------------------------~~~~~~iG~p~~~~~v~I 538 (592)
+.+.++. ..+++.||+||++..++...... .....++|+|+||++++|
T Consensus 319 ~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i 398 (579)
T PRK09192 319 FAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEI 398 (579)
T ss_pred HHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEE
Confidence 7776531 35899999999975443221100 011257999999999999
Q ss_pred ECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccccc-ccCcC
Q 007715 539 LDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF-RGMPM 584 (592)
Q Consensus 539 lD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f-~~~~~ 584 (592)
+|+++++++.|+ +|||++ ++||+++++ +......+.|| ++|-+
T Consensus 399 ~d~~~~~~~~g~--~Gel~i~g~~~~~gY~~~~~-~~~~~~~dgw~~TGDlg 447 (579)
T PRK09192 399 RNEAGMPLPERV--VGHICVRGPSLMSGYFRDEE-SQDVLAADGWLDTGDLG 447 (579)
T ss_pred ECCCCCCCCCCC--EEEEEecCCchhhhhcCCcc-ccccccCCceeecccee
Confidence 999999999998 599998 789999944 43333334455 44433
|
|
| >PRK05850 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=367.83 Aligned_cols=353 Identities=14% Similarity=0.147 Sum_probs=255.0
Q ss_pred CCCCCCceEEEEeccC-CCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~-~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
+..+||++|+++.+.. ...+..+++||+||.++++++|++|.+.-++||+|+|+++|++++++++|||+++|+++||++
T Consensus 11 a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~ 90 (578)
T PRK05850 11 ASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGLEYIVAFLGALQAGLIAVPLS 90 (578)
T ss_pred HhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccHHHHHHHHHHcCceEEecC
Confidence 3789999999975421 001123589999999999999999998833799999999999999999999999999999999
Q ss_pred C---CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcC---C-CcEEEEcCCCCCCCCCCccCcccHHHhhc
Q 007715 265 D---SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---P-LKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (592)
Q Consensus 265 ~---~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (592)
+ ..+.+++.++++++++++|++++.... ......... . ..++.+.. . ++..
T Consensus 91 ~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~ 148 (578)
T PRK05850 91 VPQGGAHDERVSAVLRDTSPSVVLTTSAVVD------DVTEYVAPQPGQSAPPVIEVDL-------------L---DLDS 148 (578)
T ss_pred CCCccchHHHHHHHHHhcCCCEEEEcHHHHH------HHHHHHhhcccccccceEeecc-------------c---cccc
Confidence 7 457899999999999999999875321 111111100 0 01111100 0 0000
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhh-cC-----CCCCCEEEEecccchhch
Q 007715 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-ID-----LKVGDVYCWPTNLGWVMG 411 (592)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~-~~-----~~~~d~~l~~~~~~~~~~ 411 (592)
.. ........+++++||+|||||||+||||+++|++++..+...... +. ...++++++..|+.|+.+
T Consensus 149 --~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 221 (578)
T PRK05850 149 --PR-----GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMG 221 (578)
T ss_pred --CC-----ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCch
Confidence 00 001122356899999999999999999999999988766544322 22 356789999999999998
Q ss_pred h-HHHHHHHHcCCEEEEeCCC---CChhhHHHHHHHhCCcEEEccHHHHH-HHHhcC---cCCCCCCccccEEEEecCCC
Q 007715 412 P-VILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVK-AWRNTN---CLEGLDWTKIRSFASTGETS 483 (592)
Q Consensus 412 ~-~~~~~~L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~-~l~~~~---~~~~~~l~sLr~v~~gGe~l 483 (592)
+ ..++.+++.|+++++.+.. .++..+++++++++++++ .+|+++. .+.... .....+++++|.+++||+++
T Consensus 222 ~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~ 300 (578)
T PRK05850 222 LVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERV 300 (578)
T ss_pred hHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCC
Confidence 7 4588999999999998632 267889999999999865 5565543 333211 11234578999999999999
Q ss_pred ChhhHHHHHHhcc-----CCceeccccchhcccccccCCcCCC------------------------CccCcccccCCCc
Q 007715 484 NVDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP------------------------QAFGAFSTATMTA 534 (592)
Q Consensus 484 ~~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~------------------------~~~~~iG~p~~~~ 534 (592)
++++.+++...++ ...+++.||+||++..+.......+ ....++|+|. +.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~ 379 (578)
T PRK05850 301 HPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SP 379 (578)
T ss_pred CHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CC
Confidence 9999888877653 2468999999998753332211100 0112456665 68
Q ss_pred eEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 535 GLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 535 ~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
+++|+| ++++++|+|+. |||+| +.||+++|+.+..
T Consensus 380 ~~~ivd~~~~~~~~~g~~--Gel~v~g~~~~~gY~~~~~~t~~ 420 (578)
T PRK05850 380 TVRIVDPDTCIECPAGTV--GEIWVHGDNVAAGYWQKPEETER 420 (578)
T ss_pred EEEEEcCCCCcCCCCCCE--EEEEEecCcccccccCChhhhHH
Confidence 999999 55889999994 99999 7899999997754
|
|
| >PRK07768 long-chain-fatty-acid--CoA ligase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=362.27 Aligned_cols=356 Identities=18% Similarity=0.139 Sum_probs=268.9
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++..|+.+|+...+. .+.+||.||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 12 ~~~~~~~~~~~~~~~------~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~ 85 (545)
T PRK07768 12 ARTSPRGMVTGEPDA------PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLH 85 (545)
T ss_pred hhCCCcceEEecCCC------ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccccC
Confidence 367899998876543 24899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHH-------HHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhc
Q 007715 265 DSFAAREI-------ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (592)
Q Consensus 265 ~~~~~~~l-------~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (592)
+..+.+++ .++++.++++++++++..... ...+ .... .....++++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~~-~~~~------------------~~~~~~~~l~~ 140 (545)
T PRK07768 86 QPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAA------APVL-EEKG------------------IRVLTVADLLA 140 (545)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhh------hhhh-cccC------------------Cceeehhhhcc
Confidence 98886654 456778899999998753210 0000 0000 01223444443
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCC-CEEEEecccchhchhHH-H
Q 007715 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG-DVYCWPTNLGWVMGPVI-L 415 (592)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~-~ 415 (592)
.... ......++++++|+|||||||+||||+++|+++...+......+++.++ |++++..|++|+.++.. +
T Consensus 141 ~~~~-------~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 213 (545)
T PRK07768 141 ADPI-------DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFL 213 (545)
T ss_pred cCCC-------CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHH
Confidence 2111 1223456899999999999999999999999998887777677788776 89999999999998854 5
Q ss_pred HHHHHcCCEEEEeCCC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcC----cCCCCCCccccEEEEecCCCChhhH
Q 007715 416 FSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----CLEGLDWTKIRSFASTGETSNVDDD 488 (592)
Q Consensus 416 ~~~L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~----~~~~~~l~sLr~v~~gGe~l~~~~~ 488 (592)
+.++..|+++++.... .++..+.++++++++|++..+|.++..+.+.. .....++++||.+++||+++++++.
T Consensus 214 ~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~ 293 (545)
T PRK07768 214 TVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADV 293 (545)
T ss_pred HHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHH
Confidence 6789999999988632 26678889999999999988888777665421 1124568899999999999999998
Q ss_pred HHHHHh---cc--CCceeccccchhcccccccCCcCC-------------------------CCccCcccccCCCceEEE
Q 007715 489 LWLSSK---AW--YNAIIESCGGTELSSAYIQGSLLQ-------------------------PQAFGAFSTATMTAGLVI 538 (592)
Q Consensus 489 ~~~~~~---~~--~~~l~n~YG~TE~~~~~~~~~~~~-------------------------~~~~~~iG~p~~~~~v~I 538 (592)
+++.+. ++ ...+++.||+||++..++...... ....+++|+|++|++++|
T Consensus 294 ~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i 373 (545)
T PRK07768 294 EDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRV 373 (545)
T ss_pred HHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEE
Confidence 887653 22 235999999999976433221110 113458999999999999
Q ss_pred ECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccccc-ccC
Q 007715 539 LDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF-RGM 582 (592)
Q Consensus 539 lD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f-~~~ 582 (592)
+|++|+++++|+ +|||++ .+||++.+... ...+.+.|| ++|
T Consensus 374 ~~~~~~~~~~g~--~Gel~v~~~~~~~gy~~~~~~~-~~~~~~g~~~TGD 420 (545)
T PRK07768 374 VDEDGQVLPPRG--VGVIELRGESVTPGYLTMDGFI-PAQDADGWLDTGD 420 (545)
T ss_pred ECCCCCCCCCCC--EEEEEEccCcccccccCCCCCc-ccccCCCeeeccc
Confidence 999999999998 499999 68999865533 333333344 444
|
|
| >PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=351.76 Aligned_cols=321 Identities=15% Similarity=0.159 Sum_probs=255.9
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 13 a~~~~~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~ 84 (458)
T PRK09029 13 AQVRPQAIALRLNDE--------VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLN 84 (458)
T ss_pred HHhCCCceeeecCCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecC
Confidence 368999999997666 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+..+.+++..+++++++++++++++... ...+ . ...+. . ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~----~--------------------~~~~~---~--~~--- 125 (458)
T PRK09029 85 PQLPQPLLEELLPSLTLDFALVLEGENT-------FSAL----T--------------------SLHLQ---L--VE--- 125 (458)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCcccc-------hhhc----c--------------------ccccc---c--cc---
Confidence 9999999999999999999999875310 0000 0 00000 0 00
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCE
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (592)
........++++++++|||||||.||||+++|++++..+......+++.++|+++...|++|..++..++.+|..|++
T Consensus 126 --~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~ 203 (458)
T PRK09029 126 --GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGAT 203 (458)
T ss_pred --ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCce
Confidence 001123457889999999999999999999999999888777777889999999999999999998767788999999
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 425 lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
+++.+. ..+++.+ +++|.+..+|+++..|...... ..++|.+++||+++++.+.+++... +.++++.|
T Consensus 204 v~~~~~----~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~Y 271 (458)
T PRK09029 204 LVVRDK----QPLEQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGY 271 (458)
T ss_pred EEeCCh----HHHHHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccc
Confidence 998763 4566666 4899999999999998865432 3579999999999999998887654 58899999
Q ss_pred cchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccccc
Q 007715 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (592)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f 579 (592)
|+||++...+... .....++|+|++|++++|+| |||+| +.||+++++.+.......||.
T Consensus 272 G~tE~~~~~~~~~---~~~~~~~G~~~~~~~~~i~~-------------gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~ 335 (458)
T PRK09029 272 GLTEMASTVCAKR---ADGLAGVGSPLPGREVKLVD-------------GEIWLRGASLALGYWRQGQLVPLVNDEGWFA 335 (458)
T ss_pred cccccCcceeccC---CCCCCCCCCCCCCCEEEEeC-------------CEEEEecCceeeeeecCccccccccCCCccC
Confidence 9999975433221 12235799999999999986 56655 889999988764333333444
Q ss_pred ccCc
Q 007715 580 RGMP 583 (592)
Q Consensus 580 ~~~~ 583 (592)
++|-
T Consensus 336 TGD~ 339 (458)
T PRK09029 336 TRDR 339 (458)
T ss_pred CCCc
Confidence 4443
|
|
| >TIGR01923 menE O-succinylbenzoate-CoA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=345.41 Aligned_cols=319 Identities=19% Similarity=0.201 Sum_probs=252.2
Q ss_pred cHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecc
Q 007715 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (592)
Q Consensus 211 Ty~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~ 289 (592)
||+||.++++++|+.|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 8999999999999999999 999999999999999999999999999999999999999999999999999999999875
Q ss_pred eeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCC
Q 007715 290 ILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 369 (592)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG 369 (592)
... .. + ....+..+...... ..........+++++++|||||||
T Consensus 81 ~~~---------~~--------~---------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG 124 (436)
T TIGR01923 81 LEE---------KD--------F---------------QADSLDRIEAAGRY----ETSLSASFNMDQIATLMFTSGTTG 124 (436)
T ss_pred ccc---------cc--------e---------------eecchHhhhhcccc----cccccccCCcCceEEEEeCCCCCC
Confidence 310 00 0 00011111111110 001112345688999999999999
Q ss_pred CCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEE
Q 007715 370 EPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (592)
Q Consensus 370 ~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l 449 (592)
.||+|+++|+++...+.+....++++++|++++..|+.|..++..++.++..|+++++.+.. ..+++.|+++++|++
T Consensus 125 ~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~ 201 (436)
T TIGR01923 125 KPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHI 201 (436)
T ss_pred CCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEE
Confidence 99999999999988888877888999999999999999998887788999999999998632 388999999999999
Q ss_pred EccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccc
Q 007715 450 GTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFST 529 (592)
Q Consensus 450 ~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~ 529 (592)
.++|+++..|++.... .+++|.+++|||++++++.+++... +++++|.||+||++..++...........++|+
T Consensus 202 ~~~P~~l~~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 275 (436)
T TIGR01923 202 SLVPTQLNRLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHARPDVGR 275 (436)
T ss_pred EeHHHHHHHHHhCcCC----CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccccccCCCc
Confidence 9999999999876432 2689999999999999998887653 588999999999986544333322222235999
Q ss_pred cCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccccc-ccC
Q 007715 530 ATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF-RGM 582 (592)
Q Consensus 530 p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f-~~~ 582 (592)
|+++++++|.+++. ++ .|||++ +.||+++++.+.. .+.+.|| ++|
T Consensus 276 ~~~~~~~~i~~~~~-----~~--~Gel~v~~~~~~~gy~~~~~~~~~-~~~~~~~~TGD 326 (436)
T TIGR01923 276 PLAGREIKIKVDNK-----EG--HGEIMVKGANLMKGYLYQGELTPA-FEQQGWFNTGD 326 (436)
T ss_pred cCCCcEEEEEeCCC-----CC--ceEEEEECCccchhhCCChhhhhh-hhcCCCeeccc
Confidence 99999999943322 24 499998 7899998776533 2333444 444
|
This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate. |
| >PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=347.93 Aligned_cols=294 Identities=13% Similarity=0.040 Sum_probs=233.9
Q ss_pred EecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEE
Q 007715 209 LMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT 286 (592)
Q Consensus 209 ~lTy~eL~~~a~~lA~~L~~~-v-~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~ 286 (592)
-+.|+||.++++++|++|++. + .+|++|+++++|+++++++++||+++|++++|+||.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 478999999999999999999 7 67999999999999999999999999999999999999999999999999999998
Q ss_pred ecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCC
Q 007715 287 QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSG 366 (592)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSG 366 (592)
++.... . . . . . ... ......++++++++||||
T Consensus 99 ~~~~~~------~---~----------~-------------~-----~----~~~-------~~~~~~~~~~~~i~~TSG 130 (452)
T PRK07445 99 LDQLKL------S---H----------P-------------P-----P----LPS-------QGILPNLETGWIMIPTGG 130 (452)
T ss_pred cCcccc------c---c----------C-------------C-----C----CCc-------cccCCCCCCcEEEEeCCC
Confidence 764210 0 0 0 0 0 000 001124588999999999
Q ss_pred CCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCC
Q 007715 367 TTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGV 446 (592)
Q Consensus 367 TTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~v 446 (592)
|||.||||+++|+++...+.+....+++.+ ++.++..|++|..++..++.+|+.|+++++.+.. +.........++++
T Consensus 131 TTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~-~~~~~~~~~~~~~~ 208 (452)
T PRK07445 131 SSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYK-RLKSGQELPPNPSD 208 (452)
T ss_pred CCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChH-hccchhhhhhhcCc
Confidence 999999999999999887777666666655 4678889999999988888999999999998621 12222344457899
Q ss_pred cEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCC-CCccC
Q 007715 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFG 525 (592)
Q Consensus 447 t~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~ 525 (592)
|++.++|++++.+.+.. ...+++||.+++||+++++++.+.+... +++++|.||+||++..+....+.. .....
T Consensus 209 t~~~~vP~~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~ 283 (452)
T PRK07445 209 FFLSLVPTQLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNN 283 (452)
T ss_pred eEEEehHHHHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCC
Confidence 99999999999998632 2347899999999999999988877643 578999999999875433322211 12356
Q ss_pred cccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCch
Q 007715 526 AFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASD 567 (592)
Q Consensus 526 ~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~ 567 (592)
++|+|++|++++|+ .|+ +|||+| +.||++++.
T Consensus 284 ~~G~~~p~~~v~i~--------~g~--~Gel~v~g~~~~~gY~~~~~ 320 (452)
T PRK07445 284 SSGQVLPHAQITIP--------ANQ--TGNITIQAQSLALGYYPQIL 320 (452)
T ss_pred cCCccCCCCeEEEc--------CCC--cceEEEeCCccchhhcCCcc
Confidence 89999999999998 466 499998 689997654
|
|
| >PRK08308 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=337.67 Aligned_cols=285 Identities=11% Similarity=0.084 Sum_probs=239.7
Q ss_pred EEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHH
Q 007715 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (592)
Q Consensus 194 Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l 272 (592)
++++.++ ++||+||.++++++|+.|. . +++|++|+|+++|++++++++|||+++|++++|+|+..+.+++
T Consensus 1 ~~~~~~~--------~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~ 71 (414)
T PRK08308 1 MLIVNDE--------EYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAA 71 (414)
T ss_pred CeEecCc--------eecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHH
Confidence 3566666 9999999999999999985 6 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCC
Q 007715 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (592)
Q Consensus 273 ~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (592)
..++++++++++++++... ... . ...
T Consensus 72 ~~~~~~~~~~~~i~~~~~~---------------------------------------~~~-------~--------~~~ 97 (414)
T PRK08308 72 IRMAKRAGCHGLLYGESDF---------------------------------------TKL-------E--------AVN 97 (414)
T ss_pred HHHHHhCCCCEEEecCccc---------------------------------------ccc-------c--------CCC
Confidence 9999999999999875210 000 0 001
Q ss_pred CCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEEEEeCCC
Q 007715 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGS 431 (592)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~ 431 (592)
..+++++||+|||||||.||||+++|+++.+.+.+....+.+..+|+++...|++|+.++ ..++.+|..|+++++.+ .
T Consensus 98 ~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~ 176 (414)
T PRK08308 98 YLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-N 176 (414)
T ss_pred CCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-C
Confidence 245789999999999999999999999998888777777888899999999999999887 56889999999999986 5
Q ss_pred CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhccc
Q 007715 432 PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSS 511 (592)
Q Consensus 432 ~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~ 511 (592)
.++..+++.++++++|++.++|+++..|.+.... ..+++.+++||+++++++.+++++. ..+++|.||+||+++
T Consensus 177 ~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~ 250 (414)
T PRK08308 177 KNPKFALNILRNTPQHILYAVPLMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGC 250 (414)
T ss_pred CCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCC
Confidence 6788999999999999999999999999875422 2378899999999999998888765 368999999999975
Q ss_pred ccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEEe
Q 007715 512 AYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (592)
Q Consensus 512 ~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v~ 559 (592)
.... . ......++|+|++|+++++.++ .|++ ||+++.
T Consensus 251 ~~~~-~--~~~~~~~~G~p~~~~~~~~~~~------~~~~--gel~v~ 287 (414)
T PRK08308 251 VSIC-P--DMKSHLDLGNPLPHVSVSAGSD------ENAP--EEIVVK 287 (414)
T ss_pred eeec-C--CCCCCCccCccCCCeEEEEecC------CCCC--ceEEEE
Confidence 3321 1 1234578999999999999864 2554 999983
|
|
| >KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=322.59 Aligned_cols=372 Identities=17% Similarity=0.161 Sum_probs=274.6
Q ss_pred CceEecHHHHHHHHHHHHHHHHhh-cCCCCE-EEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeE
Q 007715 206 AVNLMTYKELREQVMLVANALDTM-FSKGDA-IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKG 283 (592)
Q Consensus 206 ~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~-V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~ 283 (592)
++..+||.|+.+++.++|++|.+. ++++++ |+|+++.+.+|+++.+||++.+...|-+...+..+.+.+-|+.++++.
T Consensus 86 ~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~ 165 (678)
T KOG1180|consen 86 DYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTA 165 (678)
T ss_pred ceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceE
Confidence 667999999999999999999999 997776 999999999999999999999999999999999999999999999999
Q ss_pred EEEecceeccCccccchhhHhhcCCCcEEEEcCCC--CCCC-CC------CccCcccHHHhhccCCCCCCCCCCCCCCCC
Q 007715 284 IFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG--NDVG-IP------LREQDLSWKDFLSSVDYHPRPNYYSPVYNP 354 (592)
Q Consensus 284 iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (592)
|+|+.+.. +.+......++....+|..+. .... .. ..-...++++++..+.... .++.+..
T Consensus 166 i~T~~~LL------~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~----~~~~~P~ 235 (678)
T KOG1180|consen 166 IFTDSELL------PKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE----IPPHPPK 235 (678)
T ss_pred EEeCHHHH------HHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC----CCCCCCC
Confidence 99998642 333333344444444443321 1110 01 1123467888888776521 2233346
Q ss_pred CCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhc-CCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCCC-
Q 007715 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP- 432 (592)
Q Consensus 355 ~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~- 432 (592)
|+|+|.|||||||||.|||||++|+|+++.+....... .+.+.|+++.++|+.|+.-+..=+.++..|+++-..+...
T Consensus 236 p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TL 315 (678)
T KOG1180|consen 236 PSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTL 315 (678)
T ss_pred CCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCccee
Confidence 79999999999999999999999999998887766555 6889999999999999999855558899999886654211
Q ss_pred -Ch-hhH----HHHHHHhCCcEEEccHHHHHHHHhc--------------------------CcCCCC------------
Q 007715 433 -LE-RSF----GKFVQDAGVTVLGTVPSLVKAWRNT--------------------------NCLEGL------------ 468 (592)
Q Consensus 433 -~~-~~l----~~~i~~~~vt~l~~~Ps~l~~l~~~--------------------------~~~~~~------------ 468 (592)
|. ..+ -.-+...++|+|..+|+++.++.+. ......
T Consensus 316 tdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkK 395 (678)
T KOG1180|consen 316 TDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKK 395 (678)
T ss_pred cccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHH
Confidence 11 111 1235688999999999999876542 000000
Q ss_pred ----CCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCC
Q 007715 469 ----DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECG 543 (592)
Q Consensus 469 ----~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g 543 (592)
.-..||.+++||+|++++..+.+...+ .+++..+||.||++...+...+. .-..+.+|.|++.++++++| ++|
T Consensus 396 Ir~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~e~~-d~~~g~vG~pl~c~eiKLvdw~Eg 473 (678)
T KOG1180|consen 396 IRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVLEPE-DFSTGRVGAPLPCCEIKLVDWEEG 473 (678)
T ss_pred HHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccccccccccchhcccEecChh-hcccccccCCccceEEEEEEhhhc
Confidence 013799999999999999877666554 37999999999998765544443 33457999999999999999 554
Q ss_pred CCCCCCCCcceeEEE-----ecccCCCchhhcccccc-cc--ccccCcCCcceecc
Q 007715 544 VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE-EV--YFRGMPMYKGMVHV 591 (592)
Q Consensus 544 ~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~-~~--~f~~~~~~~gy~~~ 591 (592)
.--+.+.|--|||+| .+||++||++|.++... ++ ||.+.+ -|.|+-
T Consensus 474 GY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGD--IGe~~p 527 (678)
T KOG1180|consen 474 GYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGD--IGEFHP 527 (678)
T ss_pred CccCCCCCCCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccc--cceecC
Confidence 333322211378888 89999999998665543 34 776433 444443
|
|
| >KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=313.87 Aligned_cols=358 Identities=21% Similarity=0.180 Sum_probs=268.7
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
||+++|+++|+++.+.. +++||+|+++.++++|+.|... ++.||.|+++|+|++|++..+||.+|+|++...|
T Consensus 86 ~vrr~p~k~aii~~~~~------~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~i 159 (649)
T KOG1179|consen 86 QVRRQPDKPAIIYEGPF------QSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITAFI 159 (649)
T ss_pred HHHhCCCccEEEEeCCC------ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceeeee
Confidence 56899999999998741 3899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC-CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
|++...+-|.+-|+-++++++|++.++.. ...++.+... ..+.++...... .+++..++.+.++....
T Consensus 160 NtNlR~~~LlHsi~~s~aralv~~~el~~------~~~e~~~~l~~~~i~~~~~~~~~----~~~g~~~L~~~l~~~~~- 228 (649)
T KOG1179|consen 160 NTNLRGEPLLHSITVSGARALVVGPELLN------ALEEILPLLIKNGIHVFSLGPTS----VPDGIESLLAKLSAAPK- 228 (649)
T ss_pred ccccccchhhhhhhhcCceEEEECHHHHH------HHHhcchhhhhccceEEecCCCC----CCchHHHHHHhhccccc-
Confidence 99999999999999999999999986431 1122211111 122233221111 11222333333333222
Q ss_pred CCCCC-CCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHH
Q 007715 343 PRPNY-YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (592)
Q Consensus 343 ~~~~~-~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (592)
.+.+ .........+++..||||||||.||..+++|.-+..........++++++|+++..+|+.|.++. ..+-.+|.
T Consensus 229 -~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~ 307 (649)
T KOG1179|consen 229 -HPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLL 307 (649)
T ss_pred -CCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHh
Confidence 1111 22334455789999999999999999999998877666656678899999999999999998776 67889999
Q ss_pred cCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 421 ~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
.|+|+|+-. .++...+|+-..+|++|++.-+--+.+.|++.+......-..+|..+-.| +.++.++.+..+|+..+|
T Consensus 308 ~GaT~Vlrk-KFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNG--LR~diW~~Fv~RFg~~~I 384 (649)
T KOG1179|consen 308 HGATVVLRK-KFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNG--LRPDIWQQFVKRFGIIKI 384 (649)
T ss_pred cCceEEEec-ccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCC--CCchHHHHHHHHcCCCeE
Confidence 999999976 78889999999999999999999999999998766555556788776444 779999999999987789
Q ss_pred eccccchhcccccccCCcCCCCccCccccc------CCCceE-E--------EECCCCC--CCCCCCCcceeEEE-----
Q 007715 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTA------TMTAGL-V--------ILDECGV--PYPDDQPCVGEVGL----- 558 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p------~~~~~v-~--------IlD~~g~--~vp~G~~giGel~v----- 558 (592)
.+.||+||..+..+- . ..+.+.||+- +--+++ + |-|++|- +|++|+| |.++=
T Consensus 385 gE~YgaTEgn~~~~N-~---d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEp--GlLv~~i~~k 458 (649)
T KOG1179|consen 385 GEFYGATEGNSNLVN-Y---DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEP--GLLVGKIVQK 458 (649)
T ss_pred EEEeccccCcceeee-e---cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCC--ceEEEEeccC
Confidence 999999999764332 2 2233444431 111111 2 2333432 7889998 64431
Q ss_pred -----ecccCCCchhh
Q 007715 559 -----FPLYLGASDRL 569 (592)
Q Consensus 559 -----~~gY~~~~~~~ 569 (592)
+.||.|..+.+
T Consensus 459 ~P~~~F~GY~g~~~~t 474 (649)
T KOG1179|consen 459 NPLRSFLGYAGPKKAT 474 (649)
T ss_pred CchhhhccccCchhhh
Confidence 67999976654
|
|
| >PTZ00297 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=335.35 Aligned_cols=348 Identities=13% Similarity=0.062 Sum_probs=247.3
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++|+++|+..... .++++.+||+|+.++++++|++|+++ |++||+|+|+++|+++|+++.+||+++|++.||++
T Consensus 437 a~~~pd~~al~~~~~---~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly 513 (1452)
T PTZ00297 437 VTRHSTFRCLGQTSE---SGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPLV 513 (1452)
T ss_pred HHHCCCCeEEEEecc---CCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCC
Confidence 478999999974311 12345899999999999999999999 99999999999999999999999999999999997
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCC--C--CCCccCcccHHHhhccCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDV--G--IPLREQDLSWKDFLSSVD 340 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~--~~~~~~~~~~~~~~~~~~ 340 (592)
+ +.+++.++++++++++||++.... +.+..+.......++++....... . ........+|++++..+.
T Consensus 514 ~--t~~eL~yIL~~S~akvVfv~~~~l------~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~ 585 (1452)
T PTZ00297 514 G--KGSTMRTLIDEHKIKVVFADRNSV------AAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGR 585 (1452)
T ss_pred C--CHHHHHHHHHhcCCcEEEEchhHH------HHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcCc
Confidence 5 467999999999999999986432 222222111122344443110000 0 000012456888887653
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEe---CCCCCCCCcEEEeCCchHHHHHHHhhhhc---CCCCCCEEEEecccchhchhHH
Q 007715 341 YHPRPNYYSPVYNPVDAVVNILF---SSGTTGEPKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYCWPTNLGWVMGPVI 414 (592)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~iiy---TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~~~~~~~~~~~ 414 (592)
.. .. .......++|++.|+| ||||||.||||++||+|++..+....... ...++|+++.++|++|......
T Consensus 586 ~~--~~-~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~~ 662 (1452)
T PTZ00297 586 LC--PV-PLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRVF 662 (1452)
T ss_pred cc--Cc-cccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHHH
Confidence 21 11 1122346789999996 99999999999999999988877654322 3567899999999999988766
Q ss_pred HHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc----C----------------------CCC
Q 007715 415 LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----L----------------------EGL 468 (592)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~----~----------------------~~~ 468 (592)
.+.++..|+++.. .++..+++.|+++++|++.++|.++..+.+... . ...
T Consensus 663 ~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~ 738 (1452)
T PTZ00297 663 VLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRR 738 (1452)
T ss_pred HHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6788999999864 357899999999999999999999987753200 0 000
Q ss_pred C----------------CccccEEEEecC--CCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCccccc
Q 007715 469 D----------------WTKIRSFASTGE--TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTA 530 (592)
Q Consensus 469 ~----------------l~sLr~v~~gGe--~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p 530 (592)
. -.++|.+++||. +++..+ .. +.++..+||.||+.. ...+ . .....|+|
T Consensus 739 ~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l-----~~--~i~i~~g~glTE~~~---~~~~-~--~~~~~G~P 805 (1452)
T PTZ00297 739 DSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSL-----LE--HISVCYVPCLREVFF---LPSE-G--VFCVDGTP 805 (1452)
T ss_pred CcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHH-----hC--CceEEEecceEEeee---ecCC-C--CcccCCee
Confidence 0 046899999873 443222 22 467888999999532 2222 1 11234999
Q ss_pred CCCceEEEECC-C-CCCCCCCCCcceeEEEecccCCCchhhcc
Q 007715 531 TMTAGLVILDE-C-GVPYPDDQPCVGEVGLFPLYLGASDRLLN 571 (592)
Q Consensus 531 ~~~~~v~IlD~-~-g~~vp~G~~giGel~v~~gY~~~~~~~~~ 571 (592)
+||++++|.|. + +.. ++ .|||++ +|+++|++|..
T Consensus 806 lpgvEvKI~~~~E~~~~--~~---~GEIlv--r~~kdpe~T~e 841 (1452)
T PTZ00297 806 APSLQVDLEPFDEPSDG--AG---IGQLVL--AKKGEPRRTLP 841 (1452)
T ss_pred cCceEEEEcccccccCC--CC---CCeEEE--EECCChHHHHH
Confidence 99999999873 2 221 22 499999 67899998844
|
|
| >TIGR03089 conserved hypothetical protein TIGR03089 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=214.54 Aligned_cols=216 Identities=16% Similarity=0.136 Sum_probs=159.0
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++.+|+++|+++.+.+ .++.+++||+||.++++++|+.|++ . +++||+|+|+++|+++++++++||+++|++++|+
T Consensus 6 ~~~~p~~~al~~~~~~--~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~ 83 (227)
T TIGR03089 6 LAADPASPRLTFYDDA--TGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLA 83 (227)
T ss_pred hhhCCCCcEEEEEcCC--CCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeC
Confidence 4678999999864320 1123479999999999999999998 8 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCC--CCCCCCCCccCcccHHHhhccCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI--GNDVGIPLREQDLSWKDFLSSVDY 341 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 341 (592)
+ +++++++|++++..... . .+..++.+... ..........+...|.+.......
T Consensus 84 n-------------~s~a~~~v~~~~~~~~~------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (227)
T TIGR03089 84 G-------------DPDADVVVTGPDRLAAA------A-----GSGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGD 139 (227)
T ss_pred C-------------CCCCCEEEeCcchhhhc------c-----cCCceEEEeccccccCCCCCCCCcccchhhhhhccCC
Confidence 4 89999999998653211 0 11233333210 000000011233455554442221
Q ss_pred CCCCCCCCCC-CCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHH
Q 007715 342 HPRPNYYSPV-YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (592)
Q Consensus 342 ~~~~~~~~~~-~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (592)
...+. ...++|+|.|+||||+ +|++++... ...+++++|+++ .+|++|..++ ..++.+|
T Consensus 140 -----~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l 200 (227)
T TIGR03089 140 -----QFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPL 200 (227)
T ss_pred -----CCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHh
Confidence 11111 3456899999999986 666654433 456789999999 9999999998 5688999
Q ss_pred HcCCEEEEeCCCCChhhHHHHHHHhCCc
Q 007715 420 LNGATLALYQGSPLERSFGKFVQDAGVT 447 (592)
Q Consensus 420 ~~G~~lvl~~~~~~~~~l~~~i~~~~vt 447 (592)
..|+++++++ .+++..+++.|+++|||
T Consensus 201 ~~G~t~v~~~-rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 201 AAGGSLVLVT-HPDPARLDQIAETERVT 227 (227)
T ss_pred ccCceEEEec-CCCHHHHHHHHHhhcCC
Confidence 9999999996 78999999999999997
|
This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501. |
| >PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-24 Score=220.68 Aligned_cols=186 Identities=15% Similarity=0.095 Sum_probs=150.8
Q ss_pred CCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEe--CCC
Q 007715 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY--QGS 431 (592)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~--~~~ 431 (592)
.+++++||+|||||||.||||+++|+++..........+ ...++++...|++|..++..++.+++.|+++++. ...
T Consensus 33 ~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~~ 110 (358)
T PRK07824 33 IDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSAG 110 (358)
T ss_pred CCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCCC
Confidence 468999999999999999999999999987776554443 3557888899999999988788999999999884 345
Q ss_pred CChhhHHHHHHHhC--CcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhc
Q 007715 432 PLERSFGKFVQDAG--VTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTEL 509 (592)
Q Consensus 432 ~~~~~l~~~i~~~~--vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~ 509 (592)
.++..+++.+++++ +++...+|+.+..++.... ...+++++|.+++||+++++++.+++... +++++|.||+||+
T Consensus 111 ~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~TE~ 187 (358)
T PRK07824 111 FDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGMSET 187 (358)
T ss_pred cCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccCCcc
Confidence 68889999999998 5677778998887766533 23457899999999999999998887753 5889999999998
Q ss_pred ccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchh
Q 007715 510 SSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDR 568 (592)
Q Consensus 510 ~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~ 568 (592)
+..+ ...|+|++|++++|.| |||++ ++||+|+++.
T Consensus 188 ~~~~-----------~~~G~~~~g~~v~i~~-------------Gei~v~g~~~~~gY~~~~~~ 227 (358)
T PRK07824 188 SGGC-----------VYDGVPLDGVRVRVED-------------GRIALGGPTLAKGYRNPVDP 227 (358)
T ss_pred CCCc-----------CcCceeCCCCEEEecC-------------CEEEEecCccccccCCCccc
Confidence 6432 1358999999999943 45554 8899999874
|
|
| >TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-21 Score=205.23 Aligned_cols=199 Identities=18% Similarity=0.118 Sum_probs=148.5
Q ss_pred CCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHH---HhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEEEEe
Q 007715 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALY 428 (592)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~ 428 (592)
.+.+++++++|||||||+||+|+++|+++..... .....++++++|+++...++++..+. ...+.++..|++++..
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 3457889999999999999999999998765432 22344688899999887666554333 3356678889999877
Q ss_pred CCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCC--CCCccccEEEEecCCCChhhHHHHHHhccCCceeccccc
Q 007715 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG--LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGG 506 (592)
Q Consensus 429 ~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~--~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 506 (592)
+. .++..+++.|+++++|++.++|+++..|++...... ....+||.+++|||+++++..+++.+.++ ++++|.||+
T Consensus 152 ~~-~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g-~~v~~~YG~ 229 (422)
T TIGR02155 152 SG-GQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLG-MKATDIYGL 229 (422)
T ss_pred CC-CCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhC-CceEecccc
Confidence 53 356889999999999999999999999886532222 22358999999999999999988887775 889999999
Q ss_pred hhcccccccCCcCCCCccCcccccCC--CceEEEEC-CCCCCCCCCCCcceeEEEe
Q 007715 507 TELSSAYIQGSLLQPQAFGAFSTATM--TAGLVILD-ECGVPYPDDQPCVGEVGLF 559 (592)
Q Consensus 507 TE~~~~~~~~~~~~~~~~~~iG~p~~--~~~v~IlD-~~g~~vp~G~~giGel~v~ 559 (592)
||+++..+..... . ...|.+++ +..+.|+| ++|+++|+|++ |||++.
T Consensus 230 tE~~~~~~~~~~~-~---~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~--Gelvvt 279 (422)
T TIGR02155 230 SEVIGPGVAMECV-E---TQDGLHIWEDHFYPEIIDPHTGEVLPDGEE--GELVFT 279 (422)
T ss_pred hhhcCCceeeccc-c---cCCCceEecCeeEEEEECCCCCCCCCCCCe--eEEEEe
Confidence 9985211111110 0 12244443 56778999 68999999995 999994
|
Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions. |
| >TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-21 Score=198.71 Aligned_cols=168 Identities=11% Similarity=0.020 Sum_probs=132.2
Q ss_pred CCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCC--CCEEEEecccchhchh-HHHHHHHHcCCEEEEeCCCC
Q 007715 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV--GDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSP 432 (592)
Q Consensus 356 ~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~ 432 (592)
++.++++|||||||.||||+++|+++.+.+.+....++++. .|++++..|++|..+. +.++.++..|+++++.+ .+
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CC
Confidence 45799999999999999999999999887776666666643 4689999999998776 66788999999999876 46
Q ss_pred ChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccc
Q 007715 433 LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSA 512 (592)
Q Consensus 433 ~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~ 512 (592)
++..+++.++.+ |++.++|++++.|.+.. .+++++|. ++||+++++++++.+.+. +..+++|.||+||++++
T Consensus 174 ~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 667777777643 89999999999998643 34677886 678999999999988765 32469999999998764
Q ss_pred cccCCcCCCCccCcccccCCCceEEE
Q 007715 513 YIQGSLLQPQAFGAFSTATMTAGLVI 538 (592)
Q Consensus 513 ~~~~~~~~~~~~~~iG~p~~~~~v~I 538 (592)
.... .+...|+|+|+.++.+
T Consensus 246 ~~~~------~~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 246 GLRE------APDDPFRLLPDLACFA 265 (386)
T ss_pred cccc------CCCCCcccCCCccccC
Confidence 3221 1234578889887765
|
Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names. |
| >TIGR03335 F390_ftsA coenzyme F390 synthetase | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.3e-20 Score=193.77 Aligned_cols=193 Identities=16% Similarity=0.060 Sum_probs=144.1
Q ss_pred CCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhh---hhcCCCCCCEEEEecccchhchhHH-HHHHHHcCCEEEE
Q 007715 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLAL 427 (592)
Q Consensus 352 ~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G~~lvl 427 (592)
..+.++++.|.|||||||+||+|+++|+.+........ ...+++++|+++...++++..+.+. .++++..|++++.
T Consensus 82 ~~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~ 161 (445)
T TIGR03335 82 SADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIP 161 (445)
T ss_pred cCCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEc
Confidence 34567899999999999999999999998865544332 2348899999999999888766544 3556778887654
Q ss_pred eCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCC--CCCccccEEEEecCCCChhhHHHHHHhccCCceecccc
Q 007715 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG--LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (592)
Q Consensus 428 ~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~--~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (592)
.. . ....+++|+++++|.+..+|+.+..|++...... ....+||.+++|||+++++..+++.+.++ ++++|.||
T Consensus 162 ~~-~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g-~~v~~~YG 237 (445)
T TIGR03335 162 EG-K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWG-CEVYNTYG 237 (445)
T ss_pred CC-c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhC-CcEEecCC
Confidence 32 2 2456889999999999999998887765422111 12468999999999999998888877764 89999999
Q ss_pred chhcccccccCCcCCCCccCcccccC--CCceEEEECCC-CCCCCCCCCcceeEEE
Q 007715 506 GTELSSAYIQGSLLQPQAFGAFSTAT--MTAGLVILDEC-GVPYPDDQPCVGEVGL 558 (592)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~--~~~~v~IlD~~-g~~vp~G~~giGel~v 558 (592)
+||++.. ..+. . ..|..+ +.+.+.|+|++ ++++|+|+. |||++
T Consensus 238 ~TE~~~~-~~c~-~------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~--GELvv 283 (445)
T TIGR03335 238 STEGTMC-GECQ-A------VAGLHVPEDLVHLDVYDPRHQRFLPDGEC--GRIVL 283 (445)
T ss_pred hhhhhhe-EEec-C------CCCccccCCceEEEEEcCCCCCCCcCCCc--eEEEE
Confidence 9998532 1111 1 123434 45789999965 567999995 99999
|
This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen. |
| >KOG3628 consensus Predicted AMP-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.8e-18 Score=182.03 Aligned_cols=364 Identities=13% Similarity=0.098 Sum_probs=234.9
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vp 262 (592)
+++++||.+|+...+. .+.+..++||++|..++.++|..|... +++||.|+++.++++|++++++||+.+|.+++|
T Consensus 779 R~a~tp~~~a~~~~n~--~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIp 856 (1363)
T KOG3628|consen 779 RAAKTPDHIAFTTLNA--RGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIP 856 (1363)
T ss_pred HhhcCCCceEEEEecc--CCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeeec
Confidence 3589999999998665 345667999999999999999999988 999999999999999999999999999999999
Q ss_pred cCCCCC------HHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhh
Q 007715 263 IADSFA------AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFL 336 (592)
Q Consensus 263 ld~~~~------~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 336 (592)
+.|-.. ...+..|++..+++.|+++.......+..+....+...+-+.+++.+.... +|..-.
T Consensus 857 v~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~-----------t~~k~~ 925 (1363)
T KOG3628|consen 857 VPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE-----------TIRKRK 925 (1363)
T ss_pred cCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch-----------hhhhhh
Confidence 988654 346778999999999999986432222222222222222222222221110 011100
Q ss_pred ccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHH
Q 007715 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VIL 415 (592)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~ 415 (592)
..... .....++....++.+||+=+.--++|.--||.++|.++++.+........+.+..-++...++.-..++ ...
T Consensus 926 ~~~~k--~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wc 1003 (1363)
T KOG3628|consen 926 KNIKK--LNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWC 1003 (1363)
T ss_pred hhhhc--cCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHH
Confidence 00000 111122233456789999888889999999999999999999988888888777766666665555554 335
Q ss_pred HHHHHcCCEEEEeCC---CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccc------cEEEEecCCCChh
Q 007715 416 FSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI------RSFASTGETSNVD 486 (592)
Q Consensus 416 ~~~L~~G~~lvl~~~---~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sL------r~v~~gGe~l~~~ 486 (592)
+...+.|.+.++.+. .-++..|+..|++++|.-++.+=+.+....+.-..+..+++.. -.++..-|+....
T Consensus 1004 LlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~a 1083 (1363)
T KOG3628|consen 1004 LLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIA 1083 (1363)
T ss_pred HHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHH
Confidence 567788998877753 2367889999999999999988888887776533333222221 2222233333333
Q ss_pred hHHHHHHhcc----C-Cceecccc-------------chhcccccccCCcCCCCc-------------cCcccccCCCce
Q 007715 487 DDLWLSSKAW----Y-NAIIESCG-------------GTELSSAYIQGSLLQPQA-------------FGAFSTATMTAG 535 (592)
Q Consensus 487 ~~~~~~~~~~----~-~~l~n~YG-------------~TE~~~~~~~~~~~~~~~-------------~~~iG~p~~~~~ 535 (592)
+..-+...+. . ..+--.|+ ..|-+....-....+... ....|+-.++++
T Consensus 1084 li~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~ 1163 (1363)
T KOG3628|consen 1084 LIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTD 1163 (1363)
T ss_pred HHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccce
Confidence 3333332221 0 11222232 222221111000001111 012377778999
Q ss_pred EEEEC-CCCCCCCCCCCcceeEEE-----ecccCCC
Q 007715 536 LVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGA 565 (592)
Q Consensus 536 v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~ 565 (592)
+.|++ +...||..|+ +||||+ +.+|++-
T Consensus 1164 i~IvnPEtk~pc~dge--~GEIW~~S~hnA~~~~~~ 1197 (1363)
T KOG3628|consen 1164 IAIVNPETKGPCRDGE--LGEIWVNSAHNASCSFTI 1197 (1363)
T ss_pred eEEeCCccccccccCC--cceEEecccccccccccc
Confidence 99999 5577999998 699999 5666644
|
|
| >KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.6e-19 Score=194.32 Aligned_cols=299 Identities=15% Similarity=0.108 Sum_probs=197.4
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
...|+.++..+.-.....+....+||++.+..++.+|+.|... ..+|+.|++++.++.++++.+++++++|..++|+||
T Consensus 47 ~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp 126 (1032)
T KOG1178|consen 47 AEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDP 126 (1032)
T ss_pred hhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceEEEEecC
Confidence 3445555544433222334456899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCC----HHHHHHHHH---hcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhcc
Q 007715 266 SFA----AREIATRLR---VSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (592)
Q Consensus 266 ~~~----~~~l~~~l~---~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (592)
.+| ++++..+.. .....++ +..+...........+.- .......+..+...
T Consensus 127 ~~~~~e~~~~~~~ia~~~~s~~~~i~----------~~l~i~~~~~~~~~~~~s------------v~~~~~~f~~~~~~ 184 (1032)
T KOG1178|consen 127 SWPNSELAGYLMRIAHFLTSVELEIV----------RRLNIIDILLNSLFPKLS------------VETIADSFQMVLHN 184 (1032)
T ss_pred CCcccccchHHHhhhhhheeccceeh----------hhhhhHHHHhhccccccc------------hhhccchhhhhhcc
Confidence 999 332222111 1111110 011111111111100000 00000112222221
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHH
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (592)
... ......-+|+.+++.||||+||.||||..+|..+.+...|+...+..+..+++-.....+++......+.+
T Consensus 185 ~~~------r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~ 258 (1032)
T KOG1178|consen 185 EDT------REIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKFIGA 258 (1032)
T ss_pred CCC------cceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHHHHhh
Confidence 111 12223456789999999999999999999999999999999999999999987666777677777655566
Q ss_pred HHcCCEEEEeCCCC---ChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC-------------CCCCCccccEEEEecCC
Q 007715 419 FLNGATLALYQGSP---LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-------------EGLDWTKIRSFASTGET 482 (592)
Q Consensus 419 L~~G~~lvl~~~~~---~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~-------------~~~~l~sLr~v~~gGe~ 482 (592)
++.++..++++-.. .+.++...+++++++..+.+|++.+.++..... .....+.|+....+||+
T Consensus 259 ~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep 338 (1032)
T KOG1178|consen 259 LLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEP 338 (1032)
T ss_pred HhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCc
Confidence 55555555544222 367899999999999999999998877654221 11123479999999999
Q ss_pred CChhhHHHHHHhccCCceeccccchhccccc
Q 007715 483 SNVDDDLWLSSKAWYNAIIESCGGTELSSAY 513 (592)
Q Consensus 483 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 513 (592)
....+...+...+...-...-|+.|+.+.-.
T Consensus 339 ~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~ 369 (1032)
T KOG1178|consen 339 LLVSLYTSTFDLLAEIFFGLPYLSTDPTGLV 369 (1032)
T ss_pred cchhhhhhhhhcccceeeeecccCCCCccce
Confidence 9888876544443322233448888887543
|
|
| >COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.5e-13 Score=135.67 Aligned_cols=200 Identities=20% Similarity=0.137 Sum_probs=144.5
Q ss_pred CCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHH---HHHHhhhhcCCCCCCEEEEecccchhch-hHHHHHHHHcCCEEE
Q 007715 351 VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMG-PVILFSSFLNGATLA 426 (592)
Q Consensus 351 ~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~-~~~~~~~L~~G~~lv 426 (592)
...+-++...|--||||||+|+-+..+...+.. .+.......+...+|++.....++...+ +...+++--.|++++
T Consensus 85 ~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vi 164 (438)
T COG1541 85 FAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVI 164 (438)
T ss_pred ccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEE
Confidence 344556777788999999999999999976533 3333334567889999887776654333 344455555555544
Q ss_pred EeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCC--CCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 427 LYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 427 l~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
=.. .-+-..-+++|+++++|++.++|+.+..|++..... ...-.+||.+++|+|+++++..+.+...++ +..++.|
T Consensus 165 p~~-~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g-~~~~diY 242 (438)
T COG1541 165 PIS-GGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFG-CKAFDIY 242 (438)
T ss_pred ccC-CccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhC-Cceeecc
Confidence 332 225577889999999999999999999998765433 233468999999999999999999998876 8889999
Q ss_pred cchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE
Q 007715 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL 558 (592)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v 558 (592)
|.||..+.-...+.. .. -.--.-++.-+.|+| +.|+++|.|+. |||++
T Consensus 243 GltE~~g~g~~eC~~--~~--glhi~eD~~~~Ei~dP~t~e~l~dge~--GelV~ 291 (438)
T COG1541 243 GLTEGFGPGAGECTE--RN--GLHIWEDHFIFEIVDPETGEQLPDGER--GELVI 291 (438)
T ss_pred ccccccCCccccccc--cc--CCCcchhhceeeeecCCcCccCCCCCe--eEEEE
Confidence 999996542111111 11 011234577889999 67999999995 99998
|
|
| >TIGR02304 aden_form_hyp probable adenylate-forming enzyme | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-09 Score=114.11 Aligned_cols=145 Identities=15% Similarity=0.045 Sum_probs=98.4
Q ss_pred eEEEEeCCCCCCCCcEEEeCCchHHHHH---HHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCE-EEEeCCCCC
Q 007715 358 VVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT-LALYQGSPL 433 (592)
Q Consensus 358 ~a~iiyTSGTTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~-lvl~~~~~~ 433 (592)
-..+.-||||||+|-.+..+........ .......++..++++.... +..+ .++.++.+... +...+-..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~--~ly~~~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADN--NLYQSVNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccCh--hHHHHHHhccceeeecCCCcC
Confidence 3567789999999999999987653221 1111223455666655442 1111 22233323221 233332235
Q ss_pred hhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhc
Q 007715 434 ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTEL 509 (592)
Q Consensus 434 ~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~ 509 (592)
.+..++.|++++++++.+.|+.+..|++.......+ .+++.++++||.++++..+.+.+.++ +++++.||+||+
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg-~~V~~~YG~tEg 249 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFK-NTVHQIYQATEG 249 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhC-CCeeEccCCchh
Confidence 678999999999999999999999998864332222 47899999999999988888888876 899999999993
|
Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase. |
| >PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A | Back alignment and domain information |
|---|
Probab=99.08 E-value=2e-12 Score=105.66 Aligned_cols=84 Identities=17% Similarity=0.132 Sum_probs=50.3
Q ss_pred ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCC------CCCcCCCccccccccHHHHHHHhCCcccccc-
Q 007715 41 DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP------PLYWFPSLDQSKLTNLGNALEIHGPKLLGRA- 113 (592)
Q Consensus 41 ~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~------~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~- 113 (592)
+||+|||++ |+++|++.|..+ +.||||+||+|++..... .....+.....+++||.+.+.+.++++.+.+
T Consensus 1 ~hq~~Pf~~-lv~~l~~~r~~~--~~plfqv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~l~~~~~~~~l~~~~~ 77 (91)
T PF13745_consen 1 EHQDYPFER-LVEALGPPRDPS--RNPLFQVMFNYQNFSQSALDLGGLRLEPIPLENGGAKFDLTLEVREDGDGLRLQLE 77 (91)
T ss_dssp -T--S-HHH-HHHHT-----TT--S-SS-SEEEEEE----S----SSEEEEE-SS--SB-SSSEEEEEEE-SS-EEEEEE
T ss_pred CCccCCHHH-HHHHhCcccCCc--cccccCeEEEEEecccccccCCCceEEEeeccccceeeeEEEEEEecCCeEEEEEE
Confidence 699999999 999999988854 555699999999986542 1122344467899999999999999999999
Q ss_pred CCCCCcCHHHHHHHHhhCH
Q 007715 114 YKDPITSFRLFQKFTVEHP 132 (592)
Q Consensus 114 y~~~~~~~~~~~~~~i~~~ 132 (592)
|++ ++|++++|++|
T Consensus 78 Y~~-----~lf~~~ti~~~ 91 (91)
T PF13745_consen 78 YNT-----DLFSEETIERM 91 (91)
T ss_dssp EET-----TT--HHHHHHH
T ss_pred EEh-----HhCCHHHHhcC
Confidence 999 99999999865
|
|
| >KOG3628 consensus Predicted AMP-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.6e-09 Score=114.59 Aligned_cols=272 Identities=12% Similarity=0.074 Sum_probs=178.2
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHH-HHhh-cCCCCEEEEEcCCC--HHHHHHHHHHHHhCCeEEe
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANA-LDTM-FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVS 262 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~-L~~~-v~~gd~V~i~~~~~--~e~v~a~lA~~k~Ga~~vp 262 (592)
..++..+|.++-+. .+. ...+||..+..++.+.|+. |-+- ..++|+|.++...+ .+++++.++|...|.+.+|
T Consensus 105 nhs~~~ta~i~id~--kgk-~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp 181 (1363)
T KOG3628|consen 105 NHSATSTAHICIDK--KGK-ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVP 181 (1363)
T ss_pred cCCCCCceEEEEcC--CCc-eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeecc
Confidence 56677888888776 223 6799999999999999995 4445 99999999999655 8999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 263 ld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+.+..+.+++..+++-...+++++.....+....... +. .. +....|....+.....
T Consensus 182 ~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~--------~~--------------s~-~k~v~~w~t~~~k~~~ 238 (1363)
T KOG3628|consen 182 LSELSSSEELKDIVNPTPERVALTTEAGERAFINDNS--------PV--------------SL-AKAVAWWKTNDFKGNY 238 (1363)
T ss_pred chhhhhhhhhhcccCCCccceEeehhhhHHHhhhccC--------cc--------------cH-HHHHHhhhccccccee
Confidence 9999999999999999999999988754321111000 00 00 0000000000000000
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHH---------------HHHh-----hhhcCCCCCCEEEE
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---------------TAEG-----WAHIDLKVGDVYCW 402 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~---------------~~~~-----~~~~~~~~~d~~l~ 402 (592)
... ........-. ..||=||++++|.--||+.+|+ ++.. ..+. ...+++...++++.
T Consensus 239 ~~~-k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~ 315 (1363)
T KOG3628|consen 239 TKD-KIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLT 315 (1363)
T ss_pred ehh-hccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceee
Confidence 000 0001111112 7999999999999999999997 3321 1222 11233445555554
Q ss_pred ecccchhchh-HHHHHHHHcCCEEEEeCCCC--ChhhHHHHHHHhCCcEEEccHHHHHHHHhc----C-------cCCCC
Q 007715 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNT----N-------CLEGL 468 (592)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~--~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~----~-------~~~~~ 468 (592)
.....-..|+ +.++.+|++|.|.+.++... .|..+..++.+++.+++.+--..+++.... + .....
T Consensus 316 ~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~ 395 (1363)
T KOG3628|consen 316 NLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTP 395 (1363)
T ss_pred ccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCC
Confidence 4433333333 34789999999999998643 456788999999999887664444433211 1 01124
Q ss_pred CCccccEEEEecCCCChhh
Q 007715 469 DWTKIRSFASTGETSNVDD 487 (592)
Q Consensus 469 ~l~sLr~v~~gGe~l~~~~ 487 (592)
+++++|.+++.-+++..+.
T Consensus 396 d~sslk~C~Vtc~~vd~~~ 414 (1363)
T KOG3628|consen 396 DLSSLKGCMVTCTAVDTEF 414 (1363)
T ss_pred CccceeeeEEeeeecchHH
Confidence 6889999999988887764
|
|
| >PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-05 Score=82.82 Aligned_cols=194 Identities=15% Similarity=0.033 Sum_probs=103.3
Q ss_pred CCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHH---hhhhcCCCCCC--EEEEecccchhch-----hHHHHHHHHcC
Q 007715 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGD--VYCWPTNLGWVMG-----PVILFSSFLNG 422 (592)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d--~~l~~~~~~~~~~-----~~~~~~~L~~G 422 (592)
.+.+++..++-||||||.|--+.+.+..+...... ....+...... .++...|-..... .......+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 34566788899999999985555555544433322 22222221111 2233222221111 12223334455
Q ss_pred CEEEEeC-CCCChhhHHHHH----HHhCCcEEEccHHHHHHHHhcCcC--CCCCCc-cccEEEEec------CCCCh-hh
Q 007715 423 ATLALYQ-GSPLERSFGKFV----QDAGVTVLGTVPSLVKAWRNTNCL--EGLDWT-KIRSFASTG------ETSNV-DD 487 (592)
Q Consensus 423 ~~lvl~~-~~~~~~~l~~~i----~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~-sLr~v~~gG------e~l~~-~~ 487 (592)
.. .+.. ...+.+.+...+ .+.+...++..|.++..+...... ....++ ..+.+-.|| |.++. ++
T Consensus 166 ~~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef 244 (365)
T PF04443_consen 166 SR-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEF 244 (365)
T ss_pred ce-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHH
Confidence 55 3333 344655555444 355677888888877665543211 122333 344444443 34654 44
Q ss_pred HHHHHHhccC---CceeccccchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE
Q 007715 488 DLWLSSKAWY---NAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL 558 (592)
Q Consensus 488 ~~~~~~~~~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v 558 (592)
...+.+.++- ..+++.||+||.......+... . .++|-- |.|.| .+.+|||.|++ |-|.+
T Consensus 245 ~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~--~------~~~p~w-V~iRDp~tl~~~~~Ge~--Gli~v 308 (365)
T PF04443_consen 245 YARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG--H------FHVPPW-VIIRDPETLEPLPPGET--GLIQV 308 (365)
T ss_pred HHHHHHHHCCCCHHHeeeeeeccccchhheeCCCC--c------ccCCCe-EEEECCCCCcCCCCCCe--eEEEE
Confidence 5556665653 3699999999986543322111 1 123322 77889 56899999995 98887
|
LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence |
| >COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.31 Score=50.76 Aligned_cols=82 Identities=16% Similarity=0.076 Sum_probs=69.5
Q ss_pred eEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEE
Q 007715 208 NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGI 284 (592)
Q Consensus 208 ~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~--e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~i 284 (592)
--+|..++...+..+|+.|... +.+||+|.++..-+. .-+...+|+.++|+.++|+.+ -.-++...++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~-g~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG-GNTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC-ccHHHHHHHHHhcCCcEE
Confidence 4589999999999999999999 999999998876221 116778999999999999988 445677789999999999
Q ss_pred EEecce
Q 007715 285 FTQDFI 290 (592)
Q Consensus 285 v~~~~~ 290 (592)
.+.+.+
T Consensus 187 ~~tps~ 192 (438)
T COG1541 187 AATPSY 192 (438)
T ss_pred EEChHH
Confidence 999875
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 592 | ||||
| 2p2b_A | 652 | Acetyl-coa Synthetase, V386a Mutation Length = 652 | 4e-27 | ||
| 2p2q_A | 652 | Acetyl-Coa Synthetase, R584e Mutation Length = 652 | 5e-27 | ||
| 2p2f_A | 652 | Acetyl-coa Synthetase, Wild-type With Acetate, Amp, | 5e-27 | ||
| 2p2j_A | 652 | Acetyl-Coa Synthetase, K609a Mutation Length = 652 | 5e-27 | ||
| 2p20_A | 652 | Acetyl-Coa Synthetase, R584a Mutation Length = 652 | 5e-27 | ||
| 2p2m_A | 652 | Acetyl-Coa Synthetase, R194a Mutation Length = 652 | 4e-26 | ||
| 1pg3_A | 652 | Acetyl Coa Synthetase, Acetylated On Lys609 Length | 6e-26 | ||
| 1ry2_A | 663 | Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe | 3e-15 | ||
| 3r44_A | 517 | Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas | 1e-07 | ||
| 3t5b_A | 396 | Crystal Structure Of N-Terminal Domain Of Facl13 Fr | 1e-07 | ||
| 3a9u_A | 536 | Crystal Structures And Enzymatic Mechanisms Of A Po | 2e-04 |
| >pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 | Back alignment and structure |
|
| >pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 | Back alignment and structure |
|
| >pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 | Back alignment and structure |
|
| >pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 | Back alignment and structure |
|
| >pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 | Back alignment and structure |
|
| >pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 | Back alignment and structure |
|
| >pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 | Back alignment and structure |
|
| >pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 | Back alignment and structure |
|
| >pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 | Back alignment and structure |
|
| >pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 | Back alignment and structure |
|
| >pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 4e-36
Identities = 80/399 (20%), Positives = 135/399 (33%), Gaps = 44/399 (11%)
Query: 167 WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL 226
P ++ N A L + + T A + TY EL E+ A+AL
Sbjct: 17 EAPPALFNFAA--YLFRLNETRAGKT-AYIDDTGS--------TTYGELEERARRFASAL 65
Query: 227 DTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
T+ + I + M TV + +L + AG V V + L S A+ +
Sbjct: 66 RTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVI 125
Query: 286 TQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345
++ ++ L +A L P +++ + +
Sbjct: 126 ASGALV------QNVTQALESAEHDGCQLIVSQPRESEP--RLAPLFEELIDA-----AA 172
Query: 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWP 403
D + L+SSG+TG+PK T +++ TAE +A + + DV
Sbjct: 173 PAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTH-ANLYWTAELYAKPILGIAENDVVFSA 231
Query: 404 TNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT 462
L + G L GAT L P + + + TV VP+L +
Sbjct: 232 AKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVS 291
Query: 463 NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA----IIESCGGTELSSAYIQGSL 518
L IR S GE ++ + + I++ G TE+ ++ +
Sbjct: 292 PNLPARADVAIRICTSAGEALPR--EIG---ERFTAHFGCEILDGIGSTEMLHIFL-SNR 345
Query: 519 LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVG 557
+G + + DE G PD GEVG
Sbjct: 346 AGAVEYGTTGRPVPGYEIELRDEAGHAVPD-----GEVG 379
|
| >3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 7e-33
Identities = 82/438 (18%), Positives = 146/438 (33%), Gaps = 65/438 (14%)
Query: 173 LNIAECCL---LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM 229
N A L K + A+ W + E ++EL E AN L
Sbjct: 37 FNFASDVLDHWADMEKAGKRPPSPALWWVNGKGKELM---WNFRELSENSQQAANVLSGA 93
Query: 230 F--SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287
+GD +A+ +P ++ L I AG + + + +I RL++SKAK I
Sbjct: 94 CGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAG 153
Query: 288 DFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343
D + +V A L+ +L V + L++K L+
Sbjct: 154 D---------EVIQEVDTVASECPSLRIKLL------VSEKSCDGWLNFKKLLNEA---- 194
Query: 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWP 403
+ V I F+SGT+G PK + S L+ D+
Sbjct: 195 -STTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTI 253
Query: 404 TNLGWVMGPV-ILFSSFLNGATLALYQGSPLE-RSFGKFVQDAGVTVLGTVPS----LVK 457
++ GW++ + L + GA ++ + K + + + P L++
Sbjct: 254 SDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQ 313
Query: 458 AWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA----IIESCGGTELSSAY 513
L + +++ + GE+ + + W I ES G TE +
Sbjct: 314 QD-----LSSYKFPHLQNCVTVGESLL--PETL---ENWRAQTGLDIRESYGQTE-TGLT 362
Query: 514 IQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGE----------VGLFPLYL 563
S G TA + I+D+ G P G+ +G+F Y+
Sbjct: 363 CMVSKTMKIKPGYMGTAASCYDVQIIDDKGNVLPPGT--EGDIGIRVKPIRPIGIFSGYV 420
Query: 564 GASDRLLNADHEEVYFRG 581
D+ + + G
Sbjct: 421 DNPDKTAANIRGDFWLLG 438
|
| >3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 2e-32
Identities = 65/377 (17%), Positives = 121/377 (32%), Gaps = 39/377 (10%)
Query: 122 RLFQKFTVEHPEAYWEIALKEISVV---FREAPKCILDRTDKSKHGGTWLPGSVLNIAEC 178
H + + K ++ + F + + + L N A
Sbjct: 3 HHHHHHHHHHSSGHIDDDDKHMTSLLSQFVSKTD--FESYEDFQENFKILVPENFNFAYD 60
Query: 179 CLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237
+ + R +A++W +D +E T+K+L+ AN KGD +
Sbjct: 61 VV--DVYARDSPEKLAMIWCDDYGNEKIF---TFKDLKYYSDKAANFFVKHGIGKGDYVM 115
Query: 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 297
+ + L + G + V R+I R+ + K I
Sbjct: 116 LTLKSRYDFWYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIA----EDDVP 171
Query: 298 PLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFL-SSVDYHPRPNYYSPVYNPVD 356
+ +P VG + E + ++ L S RP D
Sbjct: 172 EQVDEAHAECG----DIPLKKAKVGGDVLEGWIDFRKELEESSPIFERPTGEVST-KNED 226
Query: 357 AVVNILFSSGTTGEPKAIPWTQ---LSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV 413
+ + FSSGT G PK + L I TA+ W +++ ++ + GW
Sbjct: 227 ICL-VYFSSGTAGFPKMVEHDNTYPLGHIL-TAKYW--QNVEDDGLHYTVADSGWGKCVW 282
Query: 414 -ILFSSFLNGATLALYQGSPLE-RSFGKFVQDAGVTVLGTVP----SLVKAWRNTNCLEG 467
L+ ++ G + +Y E ++ + GVT P L+K L
Sbjct: 283 GKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKED-----LSH 337
Query: 468 LDWTKIRSFASTGETSN 484
+++ ++ GE N
Sbjct: 338 YNFSTLKYAVVAGEPLN 354
|
| >1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 8e-30
Identities = 105/436 (24%), Positives = 171/436 (39%), Gaps = 85/436 (19%)
Query: 107 PKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRT-DKSKHGG 165
+ R +P +++ ++ P+ +W K + + + + + +
Sbjct: 11 ANIADRCLINPEQYETKYKQ-SINDPDTFWGEQGKILD--WITPYQKVKNTSFAPGNVSI 67
Query: 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANA 225
W LN+A CL H ++ + AI+W D +S ++Y+EL V AN
Sbjct: 68 KWYEDGTLNLAANCL--DRHLQENGDRTAIIWEGDDTSQSKH--ISYRELHRDVCRFANT 123
Query: 226 LDTM-FSKGDAIAIDMPMTVRAVIIYLA---------IILAGYVVVSIADSFAAREIATR 275
L + KGD +AI MPM A + LA +I G F+ +A
Sbjct: 124 LLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGG---------FSPEAVAGC 174
Query: 276 LRVSKAKGIFTQDFILRGGRKFPLYSKV-----LGAAPL--KAIVLPAIGNDVG-IPLRE 327
+ S ++ + T D +R GR PL V IVL G+D+ R
Sbjct: 175 IIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGR- 233
Query: 328 QDLSWKDFLSSVDYHPRPNYYSPVYNPVDA--VVNILFSSGTTGEPKAIPWTQLSSIRCT 385
DL W+D + + P ++A + IL++SG+TG+PK + T T
Sbjct: 234 -DLWWRDLIEKA-----SPEHQPE--AMNAEDPLFILYTSGSTGKPKGVLHT-------T 278
Query: 386 AEG---WAHI------DLKVGDVYCWPT-NLGWVMG-PVILFSSFLNGATLALYQGSPLE 434
G +A D GD+Y W T ++GWV G +L+ GAT +++G P
Sbjct: 279 G-GYLVYAATTFKYVFDYHPGDIY-WCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNW 336
Query: 435 RSFGKF---VQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK------IRSFASTGETSNV 485
+ + V V +L T P+ ++A EG + +R S GE N
Sbjct: 337 PTPARMCQVVDKHQVNILYTAPTAIRALMA----EGDKAIEGTDRSSLRILGSVGEPIN- 391
Query: 486 DDDLWLSSKAWYNAII 501
+ W WY I
Sbjct: 392 -PEAWE----WYWKKI 402
|
| >1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-29
Identities = 93/418 (22%), Positives = 159/418 (38%), Gaps = 82/418 (19%)
Query: 126 KFTVEHPEAYW-EIALKEIS--VVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLP 182
K ++E P ++ A + ++ F + S W LN C+
Sbjct: 31 KESIEDPAKFFGSKATQFLNWSKPFDKVFIPDPKTGRPSFQNNAWFLNGQLNACYNCV-- 88
Query: 183 SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMF--SKGDAIAIDM 240
H K N AI++ D + +TYKEL E+V VA L KGD +A+ M
Sbjct: 89 DRHALKTPNKKAIIFEGD--EPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYM 146
Query: 241 PMTVRAVIIYLA---------IILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFIL 291
PM A+I LA ++ AG F++ + R+ +K + T D
Sbjct: 147 PMVPEAIITLLAISRIGAIHSVVFAG---------FSSNSLRDRINDGDSKVVITTDESN 197
Query: 292 RGGRKFPLYSKV---LGAAPL--KAIVLPAIGNDVGIPLRE-QDLSWKDFLSSVDYHPRP 345
RGG+ V L P +V N + +DL W
Sbjct: 198 RGGKVIETKRIVDDALRETPGVRHVLVYRKTNNP-SVAFHAPRDLDWATEKKKY-----K 251
Query: 346 NYYSPVYNPVDA--VVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHI------DL 394
YY PVD+ + +L++SG+TG PK + + TA G A + D
Sbjct: 252 TYYPCT--PVDSEDPLFLLYTSGSTGAPKGVQHS-------TA-GYLLGALLTMRYTFDT 301
Query: 395 KVGDVYCWPT-NLGWVMG-PVILFSSFLNGATLALYQGSPLERSFGKF---VQDAGVTVL 449
DV+ + ++GW+ G +++ L G +++G+P ++ ++ + + VT
Sbjct: 302 HQEDVF-FTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQF 360
Query: 450 GTVPSLVKAWRNTNCLEGLDWTK------IRSFASTGETSNVDDDLWLSSKAWYNAII 501
P+ ++ + G + + +R S GE ++W WY+ I
Sbjct: 361 YVAPTALRLLKR----AGDSYIENHSLKSLRCLGSVGEPIA--AEVWE----WYSEKI 408
|
| >2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 8e-26
Identities = 47/279 (16%), Positives = 87/279 (31%), Gaps = 25/279 (8%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+Y E E+ + AL IA+ I +A + G V + +
Sbjct: 53 YSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYT 112
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
RE+ L +SK +F+ KV+ + + D
Sbjct: 113 LRELVHSLGISKPTIVFSSK---------KGLDKVITVQKTVTTIKTIVILD-SKVDYRG 162
Query: 329 DLSWKDFLS--SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ---LSSIR 383
F+ + ++ + + + V I+ SSG+TG PK + T ++
Sbjct: 163 YQCLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFS 222
Query: 384 CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLER----SFGK 439
+ + G G + G + + L + +F K
Sbjct: 223 HARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLICGFRVVM-----LTKFDEETFLK 277
Query: 440 FVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478
+QD T + VP+L + L D + + AS
Sbjct: 278 TLQDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIAS 316
|
| >3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-25
Identities = 44/284 (15%), Positives = 91/284 (32%), Gaps = 35/284 (12%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+TY E E + +A A+ + I + +++ + L + G V D +
Sbjct: 51 ITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYN 110
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-----PLKAIVLPAIGNDVGI 323
RE+ + +S+ +F K+L K I++ + + G
Sbjct: 111 ERELLNSMNISQPTVVFVSK---------KGLQKILNVQKKLPIIQKIIIMDSKTDYQGF 161
Query: 324 PLREQDLSWKDFLSSVD--YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ--- 378
S F++S ++ ++ + I+ SSG+TG PK +
Sbjct: 162 Q------SMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTA 215
Query: 379 LSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLER--- 435
+ + G + G + L + R
Sbjct: 216 CVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVL-----MYRFEE 270
Query: 436 -SFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478
F + +QD + VP+L + + ++ D + + AS
Sbjct: 271 ELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIAS 314
|
| >3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 7e-24
Identities = 49/299 (16%), Positives = 103/299 (34%), Gaps = 40/299 (13%)
Query: 191 NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVII 249
AI+ E + M + E+ E +A+ + KG+ + + +P ++ V+
Sbjct: 34 EKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDYVMT 93
Query: 250 YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 309
A+ V I + + E+ L S+A + + + VL +
Sbjct: 94 IYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLY------ENFKPVLEKTGV 147
Query: 310 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 369
+ + + + S + + S ++ + NP + V I ++ GTTG
Sbjct: 148 ERVFVVG----------GEVNSLSEVMDS----GSEDFENVKVNPEEDVALIPYTGGTTG 193
Query: 370 EPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF-LNGATLALY 428
PK + T + + L D ++G + +F S L +
Sbjct: 194 MPKGVMLTHFNLAANALQLAVATGLSHMDT---------IVGCMPMFHSAEFGLVNLMVT 244
Query: 429 QGSPL-------ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFAS 478
G+ + + ++ T VP + NT + DW+ ++ FA+
Sbjct: 245 VGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFAT 303
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-23
Identities = 51/269 (18%), Positives = 90/269 (33%), Gaps = 46/269 (17%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
TY ++ +A + ++ D + + +P V+ +LA G + F
Sbjct: 89 YTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFT 148
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
EIA + + S K I T+ K+ +V+ I ++ +P+ E
Sbjct: 149 PAEIAKQAKASNTKLIITEA---------RYVDKIKPLQNDDGVVIVCIDDNESVPIPEG 199
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLS-------S 381
L + + S V D VV + +SSGTTG PK + L+
Sbjct: 200 CLRFTELTQSTT--EASEVIDSVEISPDDVVALPYSSGTTGLPKGV---MLTHKGLVTSV 254
Query: 382 IRCTAEGWAHIDLKVGDVYCWPTNLGW-----VMGPVILFSSFLNGATLALYQGSPL--- 433
+ ++ DV L + +S + L G+ +
Sbjct: 255 AQQVDGENPNLYFHSDDVI-----LCVLPMFHIYA----LNSIMLC---GLRVGAAILIM 302
Query: 434 ----ERSFGKFVQDAGVTVLGTVPSLVKA 458
+ +Q VTV VP +V A
Sbjct: 303 PKFEINLLLELIQRCKVTVAPMVPPIVLA 331
|
| >1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-23
Identities = 55/277 (19%), Positives = 90/277 (32%), Gaps = 42/277 (15%)
Query: 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251
+AI +Y+EL + +A + + D + + +P +
Sbjct: 42 IAITCGNTH--------WSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIF 93
Query: 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LK 310
A+ G + V S + EI ++A D G L +V P LK
Sbjct: 94 ALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPD-AYSGFDYRSLARQVQSKLPTLK 152
Query: 311 AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGE 370
I++ G E+ L +D + P V + S G+TG
Sbjct: 153 NIIV------AGEA--EEFLPLEDLHTEPVKLPEVKS--------SDVAFLQLSGGSTGL 196
Query: 371 PKAIPWTQ---LSSIRCTAEGWAHIDLKVGDVYCWPT----NLGWVMGPVILFSSFLNGA 423
K IP T + S++ + E L VY N V+ G
Sbjct: 197 SKLIPRTHDDYIYSLKRSVEVC---WLDHSTVYLAALPMAHNYPLSSPGVL--GVLYAGG 251
Query: 424 TLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459
+ L SP + +F ++ VT+ VP L W
Sbjct: 252 RVVLSPSPSP-DDAF-PLIEREKVTITALVPPLAMVW 286
|
| >3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 | Back alignment and structure |
|---|
Score = 99.5 bits (249), Expect = 3e-22
Identities = 58/289 (20%), Positives = 95/289 (32%), Gaps = 41/289 (14%)
Query: 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251
+AI+ E + ++Y EL +A L KGD + +P I++
Sbjct: 47 LAIICGERQ--------LSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFF 98
Query: 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKA 311
A++ AG VV++ S E+ ++ + K + + ++S L
Sbjct: 99 ALLKAGVVVLNALYSHRQYELNAFIKQIQPKLLIGSR-------QHEVFSNNQFIDSLHD 151
Query: 312 IVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEP 371
V + + + + D D++ + P + P D V S G+TG P
Sbjct: 152 -VNLSPEIILMLNHQATDFGLLDWIET----PAETFVDFSSTPADEVAFFQLSGGSTGTP 206
Query: 372 KAIPWTQ---LSSIRCTAEGWAHIDLKVGDVYCWPT----NLGWVMGPVILFSSFLNGAT 424
K IP T S+R +AE L N G
Sbjct: 207 KLIPRTHNDYDYSVRASAEIC---GLNSNTRLLCALPAPHNFMLSSP--GALGVLHAGGC 261
Query: 425 LALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472
+ + P F +Q V + VPS V W LE K
Sbjct: 262 VVMAPNPEP-LNCF-SIIQRHQVNMASLVPSAVIMW-----LEKAAQYK 303
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 5e-22
Identities = 53/284 (18%), Positives = 89/284 (31%), Gaps = 38/284 (13%)
Query: 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243
R +++A++ E + ++Y+EL + +A +L G+ + +
Sbjct: 34 TRHAASDSIAVIDGERQ--------LSYRELNQAADNLACSLRRQGIKPGETALVQLGNV 85
Query: 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 303
I + A++ G V S E+ + + + L+S
Sbjct: 86 AELYITFFALLKLGVAPVLALFSHQRSELNAYASQIEPALLIADR-------QHALFSGD 138
Query: 304 LGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILF 363
+I + D + ++++ +P P D V
Sbjct: 139 DFLNTFVT-EHSSIRVVQLLN----DSGEHNLQDAINHPAEDFTATPS--PADEVAYFQL 191
Query: 364 SSGTTGEPKAIPWTQ---LSSIRCTAEGWAHIDLKVGDVYCWPT----NLGWVMGPVILF 416
S GTTG PK IP T S+R + E Y N P L
Sbjct: 192 SGGTTGTPKLIPRTHNDYYYSVRRSVEIC---QFTQQTRYLCAIPAAHNYAMSS-PGSL- 246
Query: 417 SSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459
FL G T+ L S F ++ V V VP V W
Sbjct: 247 GVFLAGGTVVLAADPSA-TLCF-PLIEKHQVNVTALVPPAVSLW 288
|
| >3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 4e-21
Identities = 58/337 (17%), Positives = 125/337 (37%), Gaps = 60/337 (17%)
Query: 160 KSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQV 219
+SK ++P + L + L + + ++ + + ++ TY ++
Sbjct: 10 RSKLPDIYIPKN-LPLHSYVL---ENLSNHSSKPCLI------NGANGDVYTYADVELTA 59
Query: 220 MLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRV 278
VA+ L+ + +GD I + +P + V+ +L G ++ + E+A +
Sbjct: 60 RRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKA 119
Query: 279 SKAKGIFTQDFILRGGRKFPLYSKVLGAA---PLKAIVLPAIGNDVGIPLREQDLSWKDF 335
S+AK + TQ Y KV A +K + + + + L + +
Sbjct: 120 SRAKLLITQA---------CYYEKVKDFARESDVKVMCVDSAPDGC--------LHFSEL 162
Query: 336 LSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ---LSSIRCTAEGWA-H 391
+ + +P D V + +SSGTTG PK + T ++S+ +G +
Sbjct: 163 TQADENEAPQ----VDISPDDVVA-LPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPN 217
Query: 392 IDLKVGDVYCWPTNLGW-----VMG-PVILFSSFLNGATLALYQGSPLER----SFGKFV 441
+ DV L + I+ GA + + + + S +
Sbjct: 218 LYFHSEDVI-----LCVLPMFHIYALNSIMLCGLRVGAPILI-----MPKFEIGSLLGLI 267
Query: 442 QDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478
+ V++ VP ++ + + L+ D + +R S
Sbjct: 268 EKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKS 304
|
| >4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 3e-18
Identities = 53/305 (17%), Positives = 93/305 (30%), Gaps = 51/305 (16%)
Query: 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243
+ + + +AI ++Y EL + VAN L GD +A +
Sbjct: 11 DKLDDPHKLAIETAAGDK-------ISYAELVARAGRVANVLVARGLQVGDRVAAQTEKS 63
Query: 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 303
V A+++YLA + AG V + + ++ E+ + ++ K + K + +
Sbjct: 64 VEALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVVCDP------SKRDGIAAI 117
Query: 304 LGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILF 363
L G S D + D + IL+
Sbjct: 118 AAKVGATVETLGPDG----------RGSLTDAAAGASEAFATIDRGA-----DDLAAILY 162
Query: 364 SSGTTGEPKAIPWTQ---LSSIRCTAEGWAHIDLKVGDVYCWPTNL----GWVMGPVILF 416
+SGTTG K + S+ + W DV + G +
Sbjct: 163 TSGTTGRSKGAMLSHDNLASNSLTLVDYW---RFTPDDVLIHALPIYHTHGLFVA---SN 216
Query: 417 SSFLNGATLALYQGSPLERSF--GKFVQD-AGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473
+ ++ F K + A TVL VP+ + L +
Sbjct: 217 VTLFARGSMI------FLPKFDPDKILDLMARATVLMGVPTFYTRLLQSPRLTKETTGHM 270
Query: 474 RSFAS 478
R F S
Sbjct: 271 RLFIS 275
|
| >3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 5e-18
Identities = 64/315 (20%), Positives = 102/315 (32%), Gaps = 48/315 (15%)
Query: 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FS 231
NI + A V D MTY ++ A+ L + +
Sbjct: 16 KNIGW---MLRQRATVSPRLQAYVEPST--DVR----MTYAQMNALANRCADVLTALGIA 66
Query: 232 KGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFIL 291
KGD +A+ MP +V ++ G V V I AA E++ L S +K +
Sbjct: 67 KGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSA 126
Query: 292 RGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351
P+ + A V IG D S + L S
Sbjct: 127 ------PVIDAIRAQADPPGTVTDWIGAD----------SLAERLRSAAADEPAVECGG- 169
Query: 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMG 411
D + I+++SGTTG PK + T S + + ID++ D +
Sbjct: 170 ----DDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLL-------LPL 218
Query: 412 PVILFSSF-LNGATLALYQGSP--LERSFG-----KFVQDAGVTVLGTVPSLVKAWRNTN 463
P +F L + +G F + + V + G VP+++ R
Sbjct: 219 P--MFHVAALTTVIFSAMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVP 276
Query: 464 CLEGLDWTKIRSFAS 478
LD R F +
Sbjct: 277 EFAELDAPDFRYFIT 291
|
| >3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 1e-17
Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 21/262 (8%)
Query: 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLA 252
+AI ++ TY+ L + L+A L + + + + +++++I+ A
Sbjct: 18 IAITDGQES--------YTYQNLYCEASLLAKRL--KAYQQSRVGLYIDNSIQSIILIHA 67
Query: 253 IILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAI 312
LA + I E+ ++R + IF PL + L I
Sbjct: 68 CWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTL---------PLELRGFQIVSLDDI 118
Query: 313 VLPAIGNDV-GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEP 371
G+ + + +V P+ +D + +I+F+SGTTG
Sbjct: 119 EFAGRDITTNGLLDNTMGIQYDTSNETVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQ 178
Query: 372 KAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431
KA+P T + + + + + G +L + + G T+ +
Sbjct: 179 KAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDKF 238
Query: 432 PLERSFGKFVQDAGVTVLGTVP 453
E+ +++ +T + VP
Sbjct: 239 NAEQIL-TMIKNERITHISLVP 259
|
| >3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 6e-17
Identities = 37/287 (12%), Positives = 81/287 (28%), Gaps = 42/287 (14%)
Query: 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FS 231
+A+ + + + A + R +T+++ + +A+ L
Sbjct: 6 FTLAD---VYRRNAALFPDRTAFMVDGVR--------LTHRDYLARAERLASGLLRDGVH 54
Query: 232 KGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFIL 291
GD +AI + + A+ L G +++ + A EIA L +
Sbjct: 55 TGDRVAILSQNCSEMIELIGAVALIGAILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYR 114
Query: 292 RGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351
+ + VL + + + + F P
Sbjct: 115 ------DIVAGVLPSLGGVKKA---------YAIGDGSGPFAPFKDLASDTPFS----AP 155
Query: 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMG 411
I+ ++ G P+ +Q + + + L DV L V G
Sbjct: 156 EFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTG 215
Query: 412 PVILFSSFLNGATLALYQGSPLERSFG-----KFVQDAGVTVLGTVP 453
++ + G + F + ++ VTV+
Sbjct: 216 LGLMLTLQQAGGASV------IAAKFDPAQAARDIEAHKVTVMAEFA 256
|
| >3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 4e-14
Identities = 42/255 (16%), Positives = 74/255 (29%), Gaps = 63/255 (24%)
Query: 181 LPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDM 240
L + A+ + E +TY EL A + +A+
Sbjct: 28 LSPAPTGAPADRPALRFGERS--------LTYAELAAAAGATAGRI----GGAGRVAVWA 75
Query: 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT-QDFILRGGRKFPL 299
+ + +A +LAG V + +E+A L S + D L
Sbjct: 76 TPAMETGVAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAELPPA----- 130
Query: 300 YSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVV 359
LGA + + A G + D +
Sbjct: 131 ----LGALERVDVDVRARGAVPEDGADDGDPAL--------------------------- 159
Query: 360 NILFSSGTTGEPKAIPWTQ---LSSIRCTAEGWAHIDLKVGDVYCWPTNL----GWVMGP 412
++++SGTTG PK + +++ A+ W DV L G V+G
Sbjct: 160 -VVYTSGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLG- 214
Query: 413 VILFSSFLNGATLAL 427
+ G ++
Sbjct: 215 --ILGPLRRGGSVRH 227
|
| >1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 9e-14
Identities = 45/252 (17%), Positives = 81/252 (32%), Gaps = 37/252 (14%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+T+ ELR +V VA L +A+ P + VI LA+ G V +
Sbjct: 30 LTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRLK 89
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
+ E+A ++ + + + + I+ + +
Sbjct: 90 SAELAELIKRGEMTAAVIAV-------GRQVADAIFQSGSGARIIFLG-----DLVRDGE 137
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG 388
S+ + P I ++SGTTG PKA Q ++
Sbjct: 138 PYSYGPPIEDPQREP------------AQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFM 185
Query: 389 WAHIDLKVG--DVYCWPTNL----GWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFV 441
+ L+ G +V L G+ L ++ T + + P++ + V
Sbjct: 186 STQVGLRHGRHNVVLGLMPLYHVVGFFAV---LVAALALDGTYVVVEEFRPVD--ALQLV 240
Query: 442 QDAGVTVLGTVP 453
Q VT L P
Sbjct: 241 QQEQVTSLFATP 252
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.4 bits (161), Expect = 2e-11
Identities = 74/477 (15%), Positives = 136/477 (28%), Gaps = 167/477 (35%)
Query: 10 VEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIW------RELVARKVLKPWHPHGL 63
V+D+ K L EE D I+ + S L R W E+V + V +
Sbjct: 38 VQDMPKSILS---KEEIDHIIMSKDAVSGTL--RLFWTLLSKQEEMVQKFV------EEV 86
Query: 64 HQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRL 123
++ Y + + + P S+ + R Y D ++
Sbjct: 87 LRINYKFLMSPIKTEQRQP------SMMTRMYIEQRD-----------RLYNDN----QV 125
Query: 124 FQKFTVEHPEAYWEI--ALKEISVVFREAPKCILDRTDKSKHG--G---TWLPGSV---- 172
F K+ V + Y ++ AL E+ R A ++ G G TW+ V
Sbjct: 126 FAKYNVSRLQPYLKLRQALLEL----RPAKNVLI-------DGVLGSGKTWVALDVCLSY 174
Query: 173 ------------LNIAECC--------------LLPSNHRRKEDNTVAIVWREDRCDESA 206
LN+ C + N + D++ I R
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 207 VNLMTYKELREQVMLVANALDTMFSKGDAIAIDMP----MTVRAVIIYLAIILAGYVVVS 262
L+ K +LV L + + A ++ +T R
Sbjct: 235 RRLLKSKPYEN-CLLV---LLNVQNAKAWNAFNLSCKILLTTRF--------------KQ 276
Query: 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLP--AIGND 320
+ D +A T + + T D + L K L P LP +
Sbjct: 277 VTDFLSA-ATTTHISLDHHSMTLTPDEVKS------LLLKYLDCRPQD---LPREVLT-- 324
Query: 321 VGIPL---------REQDLSWKDFL------------SSVDYHPRPNYYSPVYN-----P 354
P R+ +W ++ SS++ P Y +++ P
Sbjct: 325 -TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE-PAEYRKMFDRLSVFP 382
Query: 355 VDA-----VVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----------HIDLKV 396
A ++++++ + + E +++LKV
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVV--VNKLHKYSLVEKQPKESTISIPSIYLELKV 437
|
| >1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 1e-07
Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 50/261 (19%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
TY E+ ++ + L + GD +A R + Y A+ G V+ + +
Sbjct: 48 TTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLS 107
Query: 269 AREIATRLRVSKAKGIFT-QDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLR 326
+EIA L ++ K + + + PL + G ++ V +
Sbjct: 108 PKEIAYILNHAEDKVLLFDPNLL-------PLVEAIRGELKTVQHFV------VMDEKAP 154
Query: 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ----LSSI 382
E L++++ L R P A + +++GTTG PK + ++ L S+
Sbjct: 155 EGYLAYEEALGEEADPVRV--------PERAACGMAYTTGTTGLPKGVVYSHRALVLHSL 206
Query: 383 R-CTAEGWAHIDLKVGDVYCWPT-----NLGWVMGPVILFSSFLNGATLAL----YQGSP 432
+G A L DV N W + P +++ L GA L +
Sbjct: 207 AASLVDGTA---LSEKDVVLPVVPMFHVN-AWCL-P---YAATLVGAKQVLPGPRLDPAS 258
Query: 433 LERSFGKFVQDAGVTVLGTVP 453
L GVT VP
Sbjct: 259 LVE----LFDGEGVTFTAGVP 275
|
| >3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 31/208 (14%), Positives = 65/208 (31%), Gaps = 32/208 (15%)
Query: 191 NTVAIVWREDRCD-ESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVII 249
+ A + + D + +T+ +L + + VA L S GD + I P + V+
Sbjct: 39 HDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGSTGDRVVISAPQGLEYVVA 98
Query: 250 YLAIILAGYVVVSIA--DSFAARE-IATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA 306
+L + AG + V ++ E + L S I T + + ++ G
Sbjct: 99 FLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQH--VARRPGE 156
Query: 307 APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSG 366
+P I + + D + + ++SG
Sbjct: 157 SPPSIIEVDLLDLDAP-------------NGYTFKEDEY----------PSTAYLQYTSG 193
Query: 367 TTGEPKAIPWTQ---LSSIRCTAEGWAH 391
+T P + + + G+
Sbjct: 194 STRTPAGVVMSHQNVRVNFEQLMSGYFA 221
|
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 5e-07
Identities = 30/209 (14%), Positives = 71/209 (33%), Gaps = 37/209 (17%)
Query: 191 NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVII 249
N + + +E+ MTY++L + +A L GD + + + +
Sbjct: 26 NKKSCTFLNKELEET----MTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQA 81
Query: 250 YLAIILAGYVVVSIA----DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG 305
+L + AG + V I + + + SK + ++ + L
Sbjct: 82 FLGCLYAGCIAVPIYPPAQEKLLDK-AQRIVTNSKPVIVLMIADHIKK-----FTADELN 135
Query: 306 AAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSS 365
P K + +PAI + S++ + ++ + + + ++S
Sbjct: 136 TNP-KFLKIPAIALE-----------------SIELNRSSSWQPTSIKS-NDIAFLQYTS 176
Query: 366 GTTGEPKAIPWTQ---LSSIRCTAEGWAH 391
G+T PK + + L ++ +
Sbjct: 177 GSTMHPKGVMVSHHNLLDNLNKIFTSFHM 205
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 592 | |||
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 100.0 | |
| 1ry2_A | 663 | Acetyl-coenzyme A synthetase 1, acyl-activating en | 100.0 | |
| 1pg4_A | 652 | Acetyl-COA synthetase; AMP-forming, adenylate-form | 100.0 | |
| 4dg8_A | 620 | PA1221; ANL superfamily, adenylation domain, pepti | 100.0 | |
| 3etc_A | 580 | AMP-binding protein; adenylate-forming acyl-COA sy | 100.0 | |
| 3ni2_A | 536 | 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy | 100.0 | |
| 3g7s_A | 549 | Long-chain-fatty-acid--COA ligase (FADD-1); protei | 100.0 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 100.0 | |
| 4fuq_A | 503 | Malonyl COA synthetase; ANL superfamily, methylma | 100.0 | |
| 3e7w_A | 511 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| 4gr5_A | 570 | Non-ribosomal peptide synthetase; MBTH-like domain | 100.0 | |
| 3o83_A | 544 | Peptide arylation enzyme; ligase, adenylation of 2 | 100.0 | |
| 1mdb_A | 539 | 2,3-dihydroxybenzoate-AMP ligase; adenylation doma | 100.0 | |
| 3fce_A | 512 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| 3rg2_A | 617 | Enterobactin synthase component E (ENTE), 2,3-DIH | 100.0 | |
| 3r44_A | 517 | Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s | 100.0 | |
| 3rix_A | 550 | Luciferase, luciferin 4-monooxygenase; oxidoreduct | 100.0 | |
| 1v25_A | 541 | Long-chain-fatty-acid-COA synthetase; ligase, stru | 100.0 | |
| 3c5e_A | 570 | Acyl-coenzyme A synthetase ACSM2A, mitochondrial; | 100.0 | |
| 2d1s_A | 548 | Luciferase, luciferin 4-monooxygenase; alpha/beta, | 100.0 | |
| 3ivr_A | 509 | Putative long-chain-fatty-acid COA ligase; structu | 100.0 | |
| 2v7b_A | 529 | Benzoate-coenzyme A ligase; benzoate oxidation, be | 100.0 | |
| 1amu_A | 563 | GRSA, gramicidin synthetase 1; peptide synthetase, | 100.0 | |
| 3l8c_A | 521 | D-alanine--poly(phosphoribitol) ligase subunit 1; | 100.0 | |
| 3t5a_A | 480 | Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C | 100.0 | |
| 1t5h_X | 504 | 4-chlorobenzoyl COA ligase; adenylate-forming coen | 100.0 | |
| 3kxw_A | 590 | Saframycin MX1 synthetase B; fatty acid AMP ligase | 100.0 | |
| 3nyq_A | 505 | Malonyl-COA ligase; A/B topology ababa sandwich be | 100.0 | |
| 3ite_A | 562 | SIDN siderophore synthetase; ligase, non-ribosomal | 100.0 | |
| 3ipl_A | 501 | 2-succinylbenzoate--COA ligase; structural genomic | 100.0 | |
| 3gqw_A | 576 | Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen | 100.0 | |
| 3hgu_A | 369 | EHPF; phenazine, antibiotic, biosynthetic protein; | 99.97 | |
| 4gs5_A | 358 | Acyl-COA synthetase (AMP-forming)/AMP-acid ligase | 99.97 | |
| 2y4o_A | 443 | Phenylacetate-coenzyme A ligase; phenylacetic acid | 99.96 | |
| 3qov_A | 436 | Phenylacetate-coenzyme A ligase; acetyl-COA synthe | 99.96 | |
| 2y27_A | 437 | Phenylacetate-coenzyme A ligase; phenylacetic acid | 99.96 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 98.58 | |
| 1l5a_A | 436 | Amide synthase, VIBH; nonribosomal peptide synthet | 98.11 | |
| 4hvm_A | 493 | Tlmii; PSI-biology, midwest center for structural | 98.07 | |
| 2xhg_A | 466 | Tyrocidine synthetase A; isomerase, nonribosomal p | 96.92 | |
| 1q9j_A | 422 | PAPA5, polyketide synthase associated protein 5; c | 90.43 | |
| 2y27_A | 437 | Phenylacetate-coenzyme A ligase; phenylacetic acid | 88.52 | |
| 2y4o_A | 443 | Phenylacetate-coenzyme A ligase; phenylacetic acid | 87.74 | |
| 3qov_A | 436 | Phenylacetate-coenzyme A ligase; acetyl-COA synthe | 87.59 |
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-70 Score=650.66 Aligned_cols=519 Identities=15% Similarity=0.113 Sum_probs=401.2
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCC-------
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP------- 82 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~------- 82 (592)
-+.+|+|+.++...+|.++|++++++..++ +||++||++ |++.++ + .|+||+||++++.+...
T Consensus 299 vntlplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~-i~~~l~--~------~~lf~~~~~~~~~~~~~~~~~~~~ 369 (1304)
T 2vsq_A 299 INVVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYD-IQSQAD--Q------PKLIDHIIVFENYPLQDAKNEESS 369 (1304)
T ss_dssp CEEEEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHH-HHHSSS--C------SSSCCCEEEECSSCHHHHSCCCHH
T ss_pred eeEEEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHHH-HHHHhC--C------CcccceeEEEeecccccccccccc
Confidence 367899999999999999999999998777 999999999 999885 2 25699999998754211
Q ss_pred --CCCcCC-CccccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc--cc
Q 007715 83 --PLYWFP-SLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LD 156 (592)
Q Consensus 83 --~~~~~~-~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~ 156 (592)
.....+ ......+|||.+.+. .++++.+.+ |+. ++|+..+++++.++|.++|+++..+++.+...+ +.
T Consensus 370 ~~g~~~~~~~~~~~~~~dL~l~~~-~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~~~~l~ 443 (1304)
T 2vsq_A 370 ENGFDMVDVHVFEKSNYDLNLMAS-PGDEMLIKLAYNE-----NVFDEAFILRLKSQLLTAIQQLIQNPDQPVSTINLVD 443 (1304)
T ss_dssp HHSEEEEEEEECCCCCSSEEEEEE-CSSSCEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHHHSTTSBGGGCCCCC
T ss_pred cCCceeEeeecccccccCeEEEEe-cCCcEEEEEEECC-----ccCCHHHHHHHHHHHHHHHHHhccCccccccccCCCC
Confidence 000000 001356788877654 356788888 988 999999999999999999999986666665543 22
Q ss_pred CCCCCCCCCccCCCCcchhhhhhccc--cccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCC
Q 007715 157 RTDKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKG 233 (592)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~g 233 (592)
..+.......|+.+..... ..+++. ..+++++||++|+++.++ ++||+||+++++++|++|++. +++|
T Consensus 444 ~~e~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~g 514 (1304)
T 2vsq_A 444 DREREFLLTGLNPPAQAHE-TKPLTYWFKEAVNANPDAPALTYSGQ--------TLSYRELDEEANRIARRLQKHGAGKG 514 (1304)
T ss_dssp HHHHHHHHTTTSCCCCCCC-CCCHHHHHHHHHHHCTTSEEEESSSC--------EEEHHHHHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHHhCCCCeEEEECCe--------eEcHHHHHHHHHHHHHHHHhcCcCCc
Confidence 2222222334554332211 122222 225689999999998877 999999999999999999999 9999
Q ss_pred CEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEE
Q 007715 234 DAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV 313 (592)
Q Consensus 234 d~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (592)
++|+|+++||+++++++|||+|+|++||||||.+|.+|+.++++++++++||++..........+ .....++
T Consensus 515 ~~V~i~~~~s~~~vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~--------~~~~~~~ 586 (1304)
T 2vsq_A 515 SVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELP--------YTGTTLF 586 (1304)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTCC--------CCSEEEE
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhccC--------CCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999875421110000 0011111
Q ss_pred EcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC
Q 007715 314 LPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID 393 (592)
Q Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~ 393 (592)
+.. . ..... .. ..+.....++++|||+|||||||+||||+++|+++.+. .+....++
T Consensus 587 ~~~------------~---~~~~~-~~------~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~ 643 (1304)
T 2vsq_A 587 IDD------------Q---TRFEE-QA------SDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMA 643 (1304)
T ss_dssp SSC------------G---GGGGS-CS------SCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSC
T ss_pred ecc------------c---ccccc-cc------CCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcC
Confidence 110 0 00100 00 11123456799999999999999999999999999876 55667788
Q ss_pred CCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCC--CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCc
Q 007715 394 LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT 471 (592)
Q Consensus 394 ~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~--~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~ 471 (592)
++++|++++.++++|+.+.+++|.+|+.|+++++.+. ..++..+.+.|++++||++.++|++++.|.+... ..++
T Consensus 644 ~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~---~~~~ 720 (1304)
T 2vsq_A 644 FSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGE---DWMK 720 (1304)
T ss_dssp CCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCS---HHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhch---hcCC
Confidence 9999999999999999999999999999999999874 3588899999999999999999999999986532 2367
Q ss_pred cccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcC---CCCccCcccccCCCceEEEECCCCCCCCC
Q 007715 472 KIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDECGVPYPD 548 (592)
Q Consensus 472 sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~v~IlD~~g~~vp~ 548 (592)
+||.+++|||++++++.+++...++.++++|.||+||++++++..... ......+||+|++|++++|+|+++++||+
T Consensus 721 ~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~ 800 (1304)
T 2vsq_A 721 GLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQPF 800 (1304)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEECTTSCBCCT
T ss_pred CccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEECCCcCCCCC
Confidence 899999999999999999888887778899999999998765443221 22345789999999999999999999999
Q ss_pred CCCcceeEEE-----ecccCCCchhhccccccccccccCcCCcceeccC
Q 007715 549 DQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMVHVD 592 (592)
Q Consensus 549 G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f~~~~~~~gy~~~d 592 (592)
|++ ||||| ++||+|+|+.|.. .+....|. +|-+.|+|||
T Consensus 801 G~~--GEl~i~G~~v~~GY~~~p~~T~~-~f~~~p~~--~g~~~yrTGD 844 (1304)
T 2vsq_A 801 GAV--GELCISGMGVSKGYVNRADLTKE-KFIENPFK--PGETLYRTGD 844 (1304)
T ss_dssp TCC--EEEEEEETTCCCCBTTCHHHHHH-HEEECTTS--TTCEEEEEEE
T ss_pred CCc--eEEEEeccccCccccCCcccchh-hhccCCCC--CCCeeEecCC
Confidence 995 99999 8999999998733 33333332 3456677776
|
| >1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-63 Score=552.88 Aligned_cols=458 Identities=22% Similarity=0.336 Sum_probs=362.6
Q ss_pred CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCC---C-CCCCCCccCCCCcchhhhhhccccccCCCC
Q 007715 114 YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRT---D-KSKHGGTWLPGSVLNIAECCLLPSNHRRKE 189 (592)
Q Consensus 114 y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 189 (592)
+...+.+|..+++++++++..||..+.+.. +.|.+++.++++.. . ...+..+|+.++.+|.+.+++++++ +++
T Consensus 19 ~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~a--~~~ 95 (663)
T 1ry2_A 19 SHMGLQDYQRLHKESIEDPAKFFGSKATQF-LNWSKPFDKVFIPDPKTGRPSFQNNAWFLNGQLNACYNCVDRHA--LKT 95 (663)
T ss_dssp -----CHHHHHHHHHHHCHHHHHHHHHHHH-CCEEECCSCSBCBCSSSCSBCSTTCCBSTTCEECHHHHHTHHHH--TTC
T ss_pred cCCChhhHHHHHHHHhcCHHHHHHHHHhhc-CeeecCCceeecCccccccCCCCCCCcCCCCCccHHHHHHHHHh--ccC
Confidence 445556788999999999999999998862 57889999988765 2 2233368999999999999998876 779
Q ss_pred CCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHH-hh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCC
Q 007715 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD-TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSF 267 (592)
Q Consensus 190 pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~-~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~ 267 (592)
||++|+++.+. +.+..+++||+||+++++++|+.|+ ++ |++||+|+|+++|++++++++|||+++|++++|+++.+
T Consensus 96 pd~~Al~~~~~--~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~~Gav~vpl~~~~ 173 (663)
T 1ry2_A 96 PNKKAIIFEGD--EPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFAGF 173 (663)
T ss_dssp TTSEEEEEECS--STTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTS
T ss_pred CCceEEEEEcC--CCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeeCCCC
Confidence 99999998643 1234468999999999999999999 89 99999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhc---CC--CcEEEEcCCCC-CCCCCCccCcccHHHhhccCCC
Q 007715 268 AAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---AP--LKAIVLPAIGN-DVGIPLREQDLSWKDFLSSVDY 341 (592)
Q Consensus 268 ~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 341 (592)
+.+++.++++++++++||+++...+.++.++....+.+. ++ ..++++..... ... ........|+++......
T Consensus 174 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 252 (663)
T 1ry2_A 174 SSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVA-FHAPRDLDWATEKKKYKT 252 (663)
T ss_dssp CHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCC-CCSSSEEEHHHHHTTSCS
T ss_pred CHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCccc-cCCCccccHHHHHhhcCC
Confidence 999999999999999999999876666655544433322 22 23444433211 000 011223557777654321
Q ss_pred CCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHH-HhhhhcCCCCCCEEEEecccchhchh-HHHHHHH
Q 007715 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (592)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (592)
..+.....++|++||+|||||||+||||+++|++++.... .....++++++|++++.++++|+.+. +.++.+|
T Consensus 253 -----~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L 327 (663)
T 1ry2_A 253 -----YYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYGPL 327 (663)
T ss_dssp -----CCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHHHHTTHHHH
T ss_pred -----CCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCCCcEEEEcCCcHHhhhhHHHHHHHH
Confidence 1223345679999999999999999999999999876553 44456889999999999999999998 7789999
Q ss_pred HcCCEEEEeCCC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHh
Q 007715 420 LNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (592)
Q Consensus 420 ~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 494 (592)
++|++++++++. +++..+++.|++++||+++++|++++.|.+... ....++++||.+++|||++++++++++.+.
T Consensus 328 ~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~ 407 (663)
T 1ry2_A 328 LYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPIAAEVWEWYSEK 407 (663)
T ss_dssp HHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEECSSCCCHHHHHHHHHT
T ss_pred HhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCccccccCCcCceEEEEEEcCCCCHHHHHHHHHH
Confidence 999999999753 478899999999999999999999999987653 345678999999999999999999999887
Q ss_pred cc--CCceeccccchhcccccccCCc--CCCCccCcccccCCCceEEEECC-CCCCCCC-CCCcceeEEE-------ecc
Q 007715 495 AW--YNAIIESCGGTELSSAYIQGSL--LQPQAFGAFSTATMTAGLVILDE-CGVPYPD-DQPCVGEVGL-------FPL 561 (592)
Q Consensus 495 ~~--~~~l~n~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~~~~v~IlD~-~g~~vp~-G~~giGel~v-------~~g 561 (592)
++ .++++|.||+||++++++.... ..+.+.+++|+|++|++++|+|+ +|+++|. |+ +|||+| ++|
T Consensus 408 ~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~v~~~g~--~Gel~i~g~~p~~~~g 485 (663)
T 1ry2_A 408 IGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHA--EGVLAVKAAWPSFART 485 (663)
T ss_dssp TSCSSSCEEECBCCTTTCSCSEECCTTTCCCCCTTCCCEECTTCCEEEECSSSTTCEECSSC--EEEEEESSCCTTSCCE
T ss_pred hCCCCceEEEeECCccccCeeeccCCCCCcccCCCccccCcCCCeEEEEcCCCCCcCCCCCc--ceEEEEecCCCchhcc
Confidence 75 3789999999999865554332 23456789999999999999998 9999998 88 599998 579
Q ss_pred cCCCchhhccccc---cccccccCcC
Q 007715 562 YLGASDRLLNADH---EEVYFRGMPM 584 (592)
Q Consensus 562 Y~~~~~~~~~~~~---~~~~f~~~~~ 584 (592)
|+|+|+++....+ .++|.+||-+
T Consensus 486 y~~~~~~~~~~~~~~~~g~y~TGDlg 511 (663)
T 1ry2_A 486 IWKNHDRYLDTYLNPYPGYYFTGDGA 511 (663)
T ss_dssp ETTCHHHHHHHHTSSSTTSEEEEEEE
T ss_pred cccChHHHHHhhhcCCCCEEEcCCEE
Confidence 9999987744322 3344455443
|
| >1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-62 Score=547.76 Aligned_cols=452 Identities=25% Similarity=0.370 Sum_probs=359.1
Q ss_pred CHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCC-CCCCCccCCCCcchhhhhhccccccCCCCCCceEEEEe
Q 007715 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK-SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (592)
Q Consensus 120 ~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~ 198 (592)
+|..+.+++++++..||..+++. +.|.+++.++++.... ..+...|++++.+|...+++++++ +++||++|+++.
T Consensus 23 ~y~~l~~~~~~~p~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~a--~~~pd~~Al~~~ 98 (652)
T 1pg4_A 23 QYETKYKQSINDPDTFWGEQGKI--LDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHL--QENGDRTAIIWE 98 (652)
T ss_dssp HHHHHHHHHHHCHHHHHHHHGGG--SCCSBCCSCCEEEECCTTCCEEEESTTCEECHHHHHTGGGH--HHHTTSEEEEEE
T ss_pred HHHHHHHHHhcCHHHHHHHHHhh--CceecCCcccccCccccCCCCCEECCCCChhHHHHHHHHHh--ccCCCceEEEEE
Confidence 35778899999999999999876 5687888888765321 133568999999999999998875 678999999985
Q ss_pred ccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHH
Q 007715 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (592)
Q Consensus 199 ~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~ 277 (592)
+. +.+..+++||+||+++++++|++|+++ |++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++
T Consensus 99 ~~--~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~Gav~vpl~~~~~~~~l~~~l~ 176 (652)
T 1pg4_A 99 GD--DTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCII 176 (652)
T ss_dssp CS--STTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHH
T ss_pred cC--CCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHH
Confidence 42 123446899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCeeEEEEecceeccCccccchhhHhh---cCC----CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCC
Q 007715 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSP 350 (592)
Q Consensus 278 ~~~~~~iv~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (592)
++++++||+++.....++.++....+.+ ..+ ..++++...+.... ........|++++..... ....
T Consensus 177 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~ 250 (652)
T 1pg4_A 177 DSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDID-WQEGRDLWWRDLIEKASP-----EHQP 250 (652)
T ss_dssp HHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCC-CCBTTEEEHHHHHTTSCS-----CCCC
T ss_pred hcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCccc-ccCCCceeHHHHHhhcCC-----CCCc
Confidence 9999999999987665555544433322 221 23444432221100 001123457777654321 1122
Q ss_pred CCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHH-HhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEEEEe
Q 007715 351 VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALY 428 (592)
Q Consensus 351 ~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~ 428 (592)
....++|++||+|||||||+||||+++|++++.... .....++++++|++++.++++|+.+. +.++.+|++|++++++
T Consensus 251 ~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~ 330 (652)
T 1pg4_A 251 EAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMF 330 (652)
T ss_dssp CCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEE
T ss_pred cccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCCCCEEEEccCCeeeechHHHHHHHHHcCceEEEE
Confidence 345679999999999999999999999999876553 44556889999999999999999998 7789999999999999
Q ss_pred CCC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhcc--CCcee
Q 007715 429 QGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAII 501 (592)
Q Consensus 429 ~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~--~~~l~ 501 (592)
++. +++..+++.|++++||+++++|++++.|.+... ....++++||.+++|||++++++++++.+.++ .++++
T Consensus 331 ~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~ 410 (652)
T 1pg4_A 331 EGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVV 410 (652)
T ss_dssp CSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEE
T ss_pred CCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCCCCHHHHHHHHHHhCCCCCcEE
Confidence 753 478899999999999999999999999998653 34567899999999999999999999988765 37899
Q ss_pred ccccchhcccccccCCc-CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-------ecccCCCchhhcccc
Q 007715 502 ESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-------FPLYLGASDRLLNAD 573 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-------~~gY~~~~~~~~~~~ 573 (592)
|.||+||++++++...+ ..+.+.+++|+|++|++++|+|++|+++|.|+ +|||+| ++||+|+|+++.+..
T Consensus 411 ~~YG~TE~~~~~~~~~~~~~~~~~~s~G~p~~g~~v~i~d~~g~~v~~g~--~GEl~i~g~~p~~~~gY~~~~e~~~~~~ 488 (652)
T 1pg4_A 411 DTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGAT--EGNLVITDSWPGQARTLFGDHERFEQTY 488 (652)
T ss_dssp EEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEECTTCCBCCSSE--EEEEEECSCCTTCCCEETTCHHHHHHHH
T ss_pred ccccCcccccceecCCCCCcCccCCccccCcCCCeEEEECCCCCCcCCCc--eEEEEEccCCCchhhhhcCCHHHHHhhh
Confidence 99999999875554332 22456789999999999999999999999998 599998 578999998774432
Q ss_pred c---cccccccCcCC
Q 007715 574 H---EEVYFRGMPMY 585 (592)
Q Consensus 574 ~---~~~~f~~~~~~ 585 (592)
+ .++|.+||-++
T Consensus 489 ~~~~~g~y~TGDlg~ 503 (652)
T 1pg4_A 489 FSTFKNMYFSGDGAR 503 (652)
T ss_dssp HSSSTTSEEEEEEEE
T ss_pred hhcCCCEEECCcEEE
Confidence 2 33444554443
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-57 Score=503.05 Aligned_cols=338 Identities=17% Similarity=0.137 Sum_probs=282.1
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+++++||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+|+|++||||
T Consensus 36 ~a~~~Pd~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa~~vpl 107 (620)
T 4dg8_A 36 MAALHPHREAIRDRFG--------SVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYI 107 (620)
T ss_dssp HHHHCTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHhCCCCeEEEcCCC--------cCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEee
Confidence 4588999999999887 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
||.+|.+++.++++++++++||+++........ . ... .+..... .
T Consensus 108 d~~~p~~~l~~il~~~~~~~vl~~~~~~~~~~~----------~--~~~------------------~~~~~~~---~-- 152 (620)
T 4dg8_A 108 DLKQPAAWNAELCRQVDCRLILDCSTTPTPANG----------L--PCV------------------PVRHLPA---A-- 152 (620)
T ss_dssp CTTSCHHHHHHHHHHHTEEEEEECCSSCCCCTT----------S--CEE------------------EGGGCCC---C--
T ss_pred CccChHHHHHHHHHhCCCcEEEecCcccccccC----------C--cee------------------eeccCCc---C--
Confidence 999999999999999999999976542110000 0 000 0110000 0
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCC
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (592)
..........++++|||+|||||||+||||+++|+++.+.+.+ ...+++.++|++++.+|++|+.+++++|.+|+.|+
T Consensus 153 -~~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~ 230 (620)
T 4dg8_A 153 -PASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGG 230 (620)
T ss_dssp -CCCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTTC
T ss_pred -CccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcCC
Confidence 0111222345799999999999999999999999999877665 45678899999999999999999999999999999
Q ss_pred EEEEeC-CCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceec
Q 007715 424 TLALYQ-GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (592)
Q Consensus 424 ~lvl~~-~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (592)
++++.+ ...++..+.++|+++++|++.++|++++.|.+.. ..++++||.+++|||++++++.+++...+++++++|
T Consensus 231 ~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 307 (620)
T 4dg8_A 231 CCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD---PDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVN 307 (620)
T ss_dssp EEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC---GGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEE
T ss_pred EEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC---hhhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEe
Confidence 999975 3458899999999999999999999999998754 235789999999999999998888887777889999
Q ss_pred cccchhcccccccCCc---CCCCccCcccccCCCceEEEECCCCCC-CCCCCCcceeEEE-----ecccCCCchhhccc
Q 007715 503 SCGGTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDECGVP-YPDDQPCVGEVGL-----FPLYLGASDRLLNA 572 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~v~IlD~~g~~-vp~G~~giGel~v-----~~gY~~~~~~~~~~ 572 (592)
.||+||++++++.... .......++|+|++|++++|+|+++++ +|+|++ |||+| ++||+|+|+.|...
T Consensus 308 ~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~~g~~--GEl~i~G~~v~~GY~~~p~~t~~~ 384 (620)
T 4dg8_A 308 GYGPTENTTFTCCHVVTDDDLEEDDIPIGKAIAGTAVLLLDEHGQEIAEPDRA--GEIVAFGAGLAQGYRNDAARTRAS 384 (620)
T ss_dssp EECCGGGCSCSEEEECCTGGGGSSSCCCBEECTTEEEEEECTTSCBCCSSSCC--EEEEEEETTCCSEETTCHHHHHHH
T ss_pred eEchhhhhhheEEEeccccccCCCCCCceecccCcEEEEECccCCCCCCCCCc--eEEEEeccccccccCCChhhhhhh
Confidence 9999999875443222 122345799999999999999999988 789995 99999 89999999987443
|
| >3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-57 Score=494.28 Aligned_cols=398 Identities=16% Similarity=0.153 Sum_probs=314.5
Q ss_pred ccCCCCcchhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 007715 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (592)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~ 244 (592)
.|......|....++++++ +++||++|+++.+. .+..+++||+||+++++++|++|+++ |++||+|+|+++|++
T Consensus 48 ~~~~~~~~n~~~~~l~~~a--~~~pd~~Al~~~~~---~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~ 122 (580)
T 3etc_A 48 KILVPENFNFAYDVVDVYA--RDSPEKLAMIWCDD---YGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRY 122 (580)
T ss_dssp CBCCCSSCCHHHHTHHHHH--HHCTTCEEEEEEES---SSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCT
T ss_pred CCCCcccchHHHHHHHHHH--hhCCCCEEEEEEcC---CCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH
Confidence 4555666788777777765 78999999998543 13456999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC---CcEEEEcCCCCCC
Q 007715 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---LKAIVLPAIGNDV 321 (592)
Q Consensus 245 e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~ 321 (592)
++++++|||+|+|+++||+++.++.+++.++++++++++||++.+.. .......+...++ ...+.+...
T Consensus 123 e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---- 194 (580)
T 3etc_A 123 DFWYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDD----VPEQVDEAHAECGDIPLKKAKVGGD---- 194 (580)
T ss_dssp HHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTT----HHHHHHHHHHHHCSCCCEEEEESSS----
T ss_pred HHHHHHHHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchh----HHHHHHHHhhhCCCcceEEEEeCCc----
Confidence 99999999999999999999999999999999999999999987531 0112222222222 233333221
Q ss_pred CCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEE
Q 007715 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYC 401 (592)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l 401 (592)
...+...+.+........ ...........++|+|||+|||||||+||||+++|++++..+......+++.++++++
T Consensus 195 ---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (580)
T 3etc_A 195 ---VLEGWIDFRKELEESSPI-FERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHY 270 (580)
T ss_dssp ---CCTTCEEHHHHHHHSCSC-CCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCTTCEEE
T ss_pred ---cccccccHHHHHhhCCcc-cccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCCCceEE
Confidence 112345566655543320 0001111245679999999999999999999999999888777666667889999999
Q ss_pred EecccchhchhHH-HHHHHHcCCEEEEeC-CCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEe
Q 007715 402 WPTNLGWVMGPVI-LFSSFLNGATLALYQ-GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (592)
Q Consensus 402 ~~~~~~~~~~~~~-~~~~L~~G~~lvl~~-~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~g 479 (592)
+.++++|+.+.+. ++.+++.|+++++.+ ..+++..+++.|++++||++.++|++++.|.+.. ....++++||.+++|
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~l~~lr~i~~g 349 (580)
T 3etc_A 271 TVADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKED-LSHYNFSTLKYAVVA 349 (580)
T ss_dssp ECCCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSC-C---CCTTCCEEEEC
T ss_pred EeCChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhcc-cccCCCccceEEEEc
Confidence 9999999998865 788999999999985 4678999999999999999999999999998763 345678999999999
Q ss_pred cCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEEe
Q 007715 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (592)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v~ 559 (592)
||++++++.+++.+.++ ++++|.||+||+++.++. .+....+.+++|+|++|++++|+|++|++||+|+. |||+|.
T Consensus 350 Ge~l~~~~~~~~~~~~g-~~i~~~YG~TE~~~~~~~-~~~~~~~~~~~G~p~~~~~v~ivd~~g~~~~~g~~--GEl~v~ 425 (580)
T 3etc_A 350 GEPLNPEVFNRFLEFTG-IKLMEGFGQTETVVTIAT-FPWMEPKPGSIGKPTPGYKIELMDRDGRLCEVGEE--GEIVIN 425 (580)
T ss_dssp SSCCCHHHHHHHHHHHS-CCCEEEECCTTSSCCEEC-CTTSCCCTTCCBEECTTCEEEEECTTSCBCCTTCC--EEEEEE
T ss_pred cCCCCHHHHHHHHHHhC-CeEecccccccccceeec-CCCCCCCCCccccCCCCCEEEEECCCCCCCCCCCc--eEEEEe
Confidence 99999999999887764 899999999999765433 33335567899999999999999999999999995 999983
Q ss_pred ----------cccCCCchhhccccccccccccCcCC
Q 007715 560 ----------PLYLGASDRLLNADHEEVYFRGMPMY 585 (592)
Q Consensus 560 ----------~gY~~~~~~~~~~~~~~~~f~~~~~~ 585 (592)
+||+++|+.+......+||-+||-++
T Consensus 426 ~~~g~~~~~~~gY~~~p~~t~~~f~~gwy~TGDlg~ 461 (580)
T 3etc_A 426 TMEGKPVGLFVHYGKDPERTEETWHDGYYHTGDMAW 461 (580)
T ss_dssp CTTCCCTTCCCEETTCHHHHHHHEETTEEEEEEEEE
T ss_pred cCCCCCCeeeccccCCHhHHHhhcCCCEEecCcEEE
Confidence 58999999885544444454555443
|
| >3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-56 Score=486.07 Aligned_cols=371 Identities=19% Similarity=0.231 Sum_probs=301.0
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+++++||++|+++.+.+ +++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 31 ~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~la~~~~Gav~vpl 104 (536)
T 3ni2_A 31 NLSNHSSKPCLINGANG------DVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAA 104 (536)
T ss_dssp TGGGSTTSEEEEETTTC------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEEC
T ss_pred HhhcCCCceEEEECCCC------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCEEecc
Confidence 34789999999986321 3899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
+|.++.+++.+++++++++++|+++... +....+.......++.+... ..+...++++......
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-- 168 (536)
T 3ni2_A 105 NPFSTPAELAKHAKASRAKLLITQACYY------EKVKDFARESDVKVMCVDSA--------PDGCLHFSELTQADEN-- 168 (536)
T ss_dssp CTTCCHHHHHHHHHHHTEEEEEECGGGT------HHHHHHHHHHTCEEEESSCC--------CTTCEETHHHHTSCGG--
T ss_pred CCCCCHHHHHHHHHhcCCEEEEEChHHH------HHHHHHHhhcCceEEEecCC--------CCCccCHHHHhhcccc--
Confidence 9999999999999999999999987542 22222222222233333211 1233445555543221
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhh----hcCCCCCCEEEEecccchhchh-HHHHHH
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (592)
..+.....++|+|||+|||||||+||||+++|+++++.+.+... .+.+.++|++++.+|++|+.++ ..++.+
T Consensus 169 ---~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~ 245 (536)
T 3ni2_A 169 ---EAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIMLCG 245 (536)
T ss_dssp ---GCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTHHHH
T ss_pred ---ccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHHHHH
Confidence 12233456899999999999999999999999999877665432 4568899999999999999998 457889
Q ss_pred HHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCC
Q 007715 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (592)
Q Consensus 419 L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~ 498 (592)
|..|+++++.+ ..++..+++.|+++++|++.++|+++..|++.......++++||.+++|||++++++.+++.+.++++
T Consensus 246 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~ 324 (536)
T 3ni2_A 246 LRVGAPILIMP-KFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAKFPQA 324 (536)
T ss_dssp HHHTCCEEECS-SCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCCCHHHHHHHHHHCTTS
T ss_pred HhcCCEEEEcC-CCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCCCCHHHHHHHHHHCCCC
Confidence 99999999987 57889999999999999999999999999988766667789999999999999999999999998889
Q ss_pred ceeccccchhcccccccCC----cCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchh
Q 007715 499 AIIESCGGTELSSAYIQGS----LLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDR 568 (592)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~----~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~ 568 (592)
+++|.||+||++..++... .......+++|+|++|++++|+| ++|+++|+|++ |||+| ++||+|+|+.
T Consensus 325 ~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--GEl~v~g~~v~~GY~~~p~~ 402 (536)
T 3ni2_A 325 RLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQP--GEICIRGDQIMKGYLNDPEA 402 (536)
T ss_dssp EEEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCC--EEEEEESTTSCSEETTCHHH
T ss_pred CccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCc--cEEEEeCcccchhhcCChhH
Confidence 9999999999986543321 12234568999999999999999 67999999995 99999 8999999998
Q ss_pred hcccccccccc-ccCc
Q 007715 569 LLNADHEEVYF-RGMP 583 (592)
Q Consensus 569 ~~~~~~~~~~f-~~~~ 583 (592)
+......+.|| +||-
T Consensus 403 t~~~~~~~g~~~TGDl 418 (536)
T 3ni2_A 403 TSRTIDKEGWLHTGDI 418 (536)
T ss_dssp HHHHBCTTSCEEEEEE
T ss_pred HHhhccCCCceEcccE
Confidence 85554344444 4443
|
| >3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-56 Score=487.96 Aligned_cols=363 Identities=16% Similarity=0.116 Sum_probs=298.2
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+.....+..+++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|+++||||
T Consensus 29 a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 108 (549)
T 3g7s_A 29 AEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDYVMTIYALWRVAATPVPIN 108 (549)
T ss_dssp HHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEccC
Confidence 47899999999987321222335999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
|.++.+++.++++++++++||+++... +.............+++.. .....+.++......
T Consensus 109 ~~~~~~~l~~il~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--- 169 (549)
T 3g7s_A 109 PMYKSFELEHILNDSEATTLVVHSMLY------ENFKPVLEKTGVERVFVVG----------GEVNSLSEVMDSGSE--- 169 (549)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEGGGH------HHHHHHHTTSCCCEEEEET----------CSSSCHHHHHHHSCS---
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHH------HHHHHHHhhCCCcEEEEeC----------CCCcCHHHHHhcCcc---
Confidence 999999999999999999999998542 2222333333322222221 123346666554332
Q ss_pred CCCCCCCCCC-CCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCC
Q 007715 345 PNYYSPVYNP-VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (592)
Q Consensus 345 ~~~~~~~~~~-~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (592)
........ ++++|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|+.++..++.++..|+
T Consensus 170 --~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~l~~G~ 247 (549)
T 3g7s_A 170 --DFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFHSAEFGLVNLMVTVGN 247 (549)
T ss_dssp --CCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSCTTSHHHHHHHTTHHHHCC
T ss_pred --ccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCc
Confidence 11122233 389999999999999999999999999998888888889999999999999999999877888999999
Q ss_pred EEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCC--CCCCccccEEEEecCCCChhhHHHHHHh----cc-
Q 007715 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRSFASTGETSNVDDDLWLSSK----AW- 496 (592)
Q Consensus 424 ~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~--~~~l~sLr~v~~gGe~l~~~~~~~~~~~----~~- 496 (592)
++++.+ .+++..+++.|+++++|+++++|+++..|++..... ..++++||.+++|||++++++.+++.+. ++
T Consensus 248 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~ 326 (549)
T 3g7s_A 248 EYVVMG-MFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWPVAPALVEKLLKLAAEKCNN 326 (549)
T ss_dssp EEEEES-SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCCCCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSC
T ss_pred eEEEcC-CCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccCCccceeEEEeCCccCCHHHHHHHHHHHHhhcCC
Confidence 999987 678899999999999999999999999998764332 2568999999999999999999888776 33
Q ss_pred -CCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhh
Q 007715 497 -YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (592)
Q Consensus 497 -~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~ 569 (592)
.++++|.||+||++++++...........++|+|++|++++|+| ++|+++|+|++ |||+| ++||+|+|+.+
T Consensus 327 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~--GEl~v~g~~v~~GY~~~~~~t 404 (549)
T 3g7s_A 327 PRLRHNQIWGMTEACPMVTTNPPLRLDKSTTQGVPMSDIELKVISLEDGRELGVGES--GEIVIRGPNIFKGYWKREKEN 404 (549)
T ss_dssp TTCEEEEEEECGGGSSEEEECCGGGGGGTTSCCEECTTCEEEEECSSSCCEECTTCC--EEEEEESTTSCSEETTCTTGG
T ss_pred ccccccceEeccccchhhhcCCccccCcCCCccccCCCCEEEEEeCCCCcCCCCCCc--eEEEEECcchhhhhCCChhhh
Confidence 37899999999998765554444445678999999999999999 89999999995 99999 79999999987
Q ss_pred ccc
Q 007715 570 LNA 572 (592)
Q Consensus 570 ~~~ 572 (592)
...
T Consensus 405 ~~~ 407 (549)
T 3g7s_A 405 QEC 407 (549)
T ss_dssp GTS
T ss_pred hhh
Confidence 443
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-55 Score=508.53 Aligned_cols=435 Identities=17% Similarity=0.180 Sum_probs=307.3
Q ss_pred HHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCCCCCCCccCCCCcchhhhhhccccccCCCCCCceEEEEeccC
Q 007715 122 RLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDR 201 (592)
Q Consensus 122 ~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~ 201 (592)
++.+..+++++..++..+++.+...+........-.... .........+.. ..+.+ +++++||++|+++.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~tl~-~~l~~--~a~~~pd~~Al~~~~~~ 86 (979)
T 3tsy_A 14 LVPRGSHMARMAPQEQAVSQVMEKQSNNNNSDVIFRSKL----PDIYIPNHLSLH-DYIFQ--NISEFATKPCLINGPTG 86 (979)
T ss_dssp -------------------------------CCCBCCSS----CCCCCCTTSCHH-HHHTT--TGGGTTTSEEEEETTTC
T ss_pred cccCcchhhhhhhHHHHHHHhhhhcccCCCCCceeecCC----CCCCCCCCCCHH-HHHHH--HHHhCCCCeEEEECCCC
Confidence 889999999999999999888754443332222111100 000001112222 23333 34889999999986321
Q ss_pred CCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcC
Q 007715 202 CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSK 280 (592)
Q Consensus 202 ~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~ 280 (592)
+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+|+|+++||+||.+|.+++.+++++++
T Consensus 87 ------~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~ 160 (979)
T 3tsy_A 87 ------HVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASN 160 (979)
T ss_dssp ------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHT
T ss_pred ------cEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcC
Confidence 3899999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEE
Q 007715 281 AKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVN 360 (592)
Q Consensus 281 ~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 360 (592)
+++||+++.+. +....+.......++.+.... ......+...|.++...... .....+.....++|+||
T Consensus 161 ~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ 229 (979)
T 3tsy_A 161 TKLIITEARYV------DKIKPLQNDDGVVIVCIDDNE---SVPIPEGCLRFTELTQSTTE--ASEVIDSVEISPDDVVA 229 (979)
T ss_dssp EEEEEECSTTT------TTSHHHHHTSCCEEEECCCCT---TSCCCTTEEEGGGTSSCCSG--GGGGSCCSCCCTTSEEE
T ss_pred CeEEEEChHHH------HHHHHHhhcCCceEEEeCCcc---cccCCcccccHHHHhhcccc--ccccCCcCCCCccceEE
Confidence 99999998643 223333322222333332211 11112233445555433221 00112233457899999
Q ss_pred EEeCCCCCCCCcEEEeCCchHHHHHHHhhh----hcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEEEEeCCCCChh
Q 007715 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLER 435 (592)
Q Consensus 361 iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvl~~~~~~~~ 435 (592)
|+|||||||+||||+++|+++++.+.+... .+.+.++|++++..|++|+.++ ..++.+|..|+++++.+ ..++.
T Consensus 230 i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~-~~~~~ 308 (979)
T 3tsy_A 230 LPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMP-KFEIN 308 (979)
T ss_dssp CCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECS-SCCHH
T ss_pred EEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeC-CCCHH
Confidence 999999999999999999999887765432 4568899999999999999998 45788999999999987 56889
Q ss_pred hHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhccccccc
Q 007715 436 SFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQ 515 (592)
Q Consensus 436 ~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~ 515 (592)
.+++.|+++++|++.++|+++..|.+.......++++||.+++|||++++++.+++.+.+++++++|.||+||++.+++.
T Consensus 309 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~ 388 (979)
T 3tsy_A 309 LLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAM 388 (979)
T ss_dssp HHHHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCCTTCCEEEESSCCCCSSHHHHHHHHCTTCEEEECEECGGGCSEEEE
T ss_pred HHHHHHHHhCCeEEEcHHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHCCCCeEEeeechhhhhHHHHh
Confidence 99999999999999999999999998876666779999999999999999999999999888999999999999865433
Q ss_pred CC----cCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccccc-ccCc
Q 007715 516 GS----LLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF-RGMP 583 (592)
Q Consensus 516 ~~----~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f-~~~~ 583 (592)
.. .......+++|+|++|++++|+| ++|+++|+|++ |||+| ++||+|+|+.+......+.|| +||-
T Consensus 389 ~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~--GEl~i~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl 465 (979)
T 3tsy_A 389 SLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQP--GEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDI 465 (979)
T ss_dssp CGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCCBCCTTCC--EEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEE
T ss_pred CCCCCCCccccCCCCcCcccCCcEEEEEeCCCCCCCCCCCc--cEEEEECCCccccccCChhhhhhhccCCCcEEcCCE
Confidence 21 12234568999999999999999 67999999995 99999 799999999885554344444 4443
|
| >4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-55 Score=473.11 Aligned_cols=365 Identities=18% Similarity=0.169 Sum_probs=291.8
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+++||++|+.....+ .+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||+||
T Consensus 11 ~~~p~~~a~~~~~~~-----~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~~ 85 (503)
T 4fuq_A 11 DKLDDPHKLAIETAA-----GDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPLNT 85 (503)
T ss_dssp SCCSCTTSEEEEETT-----CCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECCT
T ss_pred HhCCCCceEEEecCC-----CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEecCC
Confidence 778888888753210 03899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (592)
.+|.+++.++++++++++||+++... +....+.......+..+... ....+.+.......
T Consensus 86 ~~~~~~l~~il~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~---- 145 (503)
T 4fuq_A 86 AYTLHELDYFITDAEPKIVVCDPSKR------DGIAAIAAKVGATVETLGPD----------GRGSLTDAAAGASE---- 145 (503)
T ss_dssp TCCHHHHHHHHHHHCCSEEEECGGGT------TTTHHHHHHHTCEEEECCTT----------SCSHHHHHHHTSCS----
T ss_pred CCCHHHHHHHHHhcCCcEEEECchhh------HHHHHHHhhcCceEEEecCC----------cccccchhhhcCCC----
Confidence 99999999999999999999998642 22222222222222222211 11122222221111
Q ss_pred CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCE
Q 007715 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (592)
Q Consensus 346 ~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (592)
........++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|+.++ ..++.+++.|++
T Consensus 146 -~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~ 224 (503)
T 4fuq_A 146 -AFATIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGS 224 (503)
T ss_dssp -CCCCCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCE
T ss_pred -CcCcCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCE
Confidence 122234567999999999999999999999999999998888888999999999999999999887 447789999999
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 425 lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
+++.+ .+++..+++.++ ++|++.++|+++..|++.......++++||.+++|||++++++.+++...++ ++++|.|
T Consensus 225 ~~~~~-~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~-~~~~~~Y 300 (503)
T 4fuq_A 225 MIFLP-KFDPDKILDLMA--RATVLMGVPTFYTRLLQSPRLTKETTGHMRLFISGSAPLLADTHREWSAKTG-HAVLERY 300 (503)
T ss_dssp EEECS-SCCHHHHHHHHT--TCCEEEECHHHHHHHHTCTTCSTTTTTTCCEEEECSSCCCHHHHHHHHHHHS-CCEEECC
T ss_pred EEEcC-CCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCCccccchhhcEEEEECCCCCCHHHHHHHHHHhC-CCccceE
Confidence 99987 578899999998 8999999999999999887666667899999999999999999999887765 7899999
Q ss_pred cchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccccc
Q 007715 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (592)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~ 578 (592)
|+||+++.+. .........+++|+|++|++++|+| ++|+++|+|++ |||+| ++||+|+|+.+......+.|
T Consensus 301 G~TE~~~~~~-~~~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~--GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~ 377 (503)
T 4fuq_A 301 GMTETNMNTS-NPYDGDRVPGAVGPALPGVSARVTDPETGKELPRGDI--GMIEVKGPNVFKGYWRMPEKTKSEFRDDGF 377 (503)
T ss_dssp EETTTEECBC-CCSSSCCCTTEEEEBCTTCEEEEECTTTCCBCCTTCC--EEEEEESTTSCCCBTTCHHHHHHTBCTTSC
T ss_pred cccccCcccc-cCCCCCCcCCccccCCCCeEEEEEECCCCCCCcCCCc--eEEEEECCchhhhhcCChhhhHhhhCCCCC
Confidence 9999986533 2323345568999999999999999 88999999995 99999 89999999988555543444
Q ss_pred c-ccCcC
Q 007715 579 F-RGMPM 584 (592)
Q Consensus 579 f-~~~~~ 584 (592)
| +||-+
T Consensus 378 ~~TGDl~ 384 (503)
T 4fuq_A 378 FITGDLG 384 (503)
T ss_dssp EEEEEEE
T ss_pred eEcceeE
Confidence 4 44433
|
| >3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-55 Score=475.92 Aligned_cols=345 Identities=19% Similarity=0.192 Sum_probs=292.7
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
|+++||++|+++.++ ++||+||+++++++|++|++. +++|++|+++++|++++++++|||+++|+++||+
T Consensus 11 a~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl 82 (511)
T 3e7w_A 11 AETYPQTDAFRSQGQ--------SLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPYIPV 82 (511)
T ss_dssp HHHSTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHCCCCeEEEcCCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCEEEec
Confidence 478999999998776 999999999999999999885 8899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
|+.++.+++.++++++++++||+++.... . .... ......++++......
T Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~-----~-------~~~~----------------~~~~~~~~~~~~~~~~-- 132 (511)
T 3e7w_A 83 DLSIPSERIAKIIESSGAELLIHAAGLSI-----D-------AVGQ----------------QIQTVSAEELLENEGG-- 132 (511)
T ss_dssp ETTSCHHHHHHHHHHHTCCEEEESSSCCT-----T-------CCCC----------------SSCEEEHHHHHTSCSC--
T ss_pred CCCChHHHHHHHHHhCCCCEEEecccccc-----h-------hccc----------------ccceecHhhhhccccC--
Confidence 99999999999999999999999764210 0 0000 0112234454443222
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCC
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (592)
.........+++++||+|||||||.||||+++|+++.+.+.+....++++++|++++.+|++|+.+++.++.+|+.|+
T Consensus 133 --~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~ 210 (511)
T 3e7w_A 133 --SVSQDQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGG 210 (511)
T ss_dssp --CCCGGGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTC
T ss_pred --CccccccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCccceEEEeCCccHHHHHHHHHHHHhcCC
Confidence 111223456789999999999999999999999999999888888899999999999999999999988999999999
Q ss_pred EEEEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 424 TLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 424 ~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
++++.+.. .++..+++.|+++++|++.++|+++..++.........++++|.+++|||++++++.+++.+.+++++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~ 290 (511)
T 3e7w_A 211 TLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIF 290 (511)
T ss_dssp EEEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEE
T ss_pred EEEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEE
Confidence 99998642 4788999999999999999999999999987666666789999999999999999999999998889999
Q ss_pred ccccchhcccccccCCcC----CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccc
Q 007715 502 ESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNA 572 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~ 572 (592)
|.||+||+++.++..... ......++|+|++|++++|+|++|+++|+|++ |||+| ++||+|+|+.+...
T Consensus 291 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~--GEl~v~g~~v~~GY~~~~~~t~~~ 368 (511)
T 3e7w_A 291 NTYGPTEATVAVTSVEITNDVISRSESLPVGFAKPDMNIFIMDEEGQPLPEGEK--GEIVIAGPSVSRGYLGEPELTEKA 368 (511)
T ss_dssp ECCCCGGGSSCSEEEEECHHHHTTCSSCCCBEECTTCEEEEECTTSCBCCTTCC--EEEEEESTTSCCCBTTCHHHHHHH
T ss_pred eCcccchheeeeeEEeccccccccCCcCCCcceeCCCEEEEECCCCCCCCCCCc--eEEEEecCccChhhCCCcccchhh
Confidence 999999998654432211 22345689999999999999999999999995 99999 78999999987443
|
| >4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-55 Score=484.12 Aligned_cols=338 Identities=18% Similarity=0.169 Sum_probs=281.9
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||++
T Consensus 85 a~~~pd~~A~~~~~~--------~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~ 156 (570)
T 4gr5_A 85 AARAPDAVALLHEAD--------ELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGGYTMLD 156 (570)
T ss_dssp HHHCTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHCCCCeEEECCCC--------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCEEEEcC
Confidence 478999999999776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
|.++.+++.++++++++++||+++..... ......++.... .....
T Consensus 157 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~-------------~~~~~~~~~~~~----------------~~~~~----- 202 (570)
T 4gr5_A 157 PQFPVERLALSLEDTGAPLLVTSRPLSGR-------------LTGTTTLYVEDE----------------AASDA----- 202 (570)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECTTTTTS-------------SCSSEEEECCC---------------------------
T ss_pred CCChHHHHHHHHHhcCCCEEEecchhhhc-------------ccCCcceeeecc----------------ccccc-----
Confidence 99999999999999999999998753211 111111111000 00000
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCE
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (592)
..........++|+|||+|||||||.||||+++|+++.+.+.+ ...++++++|++++.+|++|+.+.+.++.+|+.|++
T Consensus 203 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~ 281 (570)
T 4gr5_A 203 PAGNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGPDEVFLQCSPVSWDAFGLELFGALLFGAR 281 (570)
T ss_dssp -CCCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCE
T ss_pred cccccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCCCCEEEEecCccHHHHHHHHHHHHhcCCE
Confidence 0011223456799999999999999999999999998776654 355678999999999999999988889999999999
Q ss_pred EEEeCC-CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceecc
Q 007715 425 LALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (592)
Q Consensus 425 lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (592)
+++.+. ..++..+++.|+++++|++.++|+++..|.+... .++++||.+++|||+++.++.+++.+.+++++++|.
T Consensus 282 ~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~ 358 (570)
T 4gr5_A 282 CVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVP---EAFEGVRYAITGGEPASVPHVAKARRDHPALRLGNG 358 (570)
T ss_dssp EEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCG---GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEE
T ss_pred EEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhch---hhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEe
Confidence 999864 4588899999999999999999999999987643 347899999999999999999998888888899999
Q ss_pred ccchhcccccccCCc---CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 504 CGGTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 504 YG~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
||+||+++.++.... .......++|+|++|++++|+|++|+++|+|+ +|||+| ++||+|+|+.+..
T Consensus 359 YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~~~~~~~G~--~GEl~v~g~~v~~GY~~~~~~t~~ 432 (570)
T 4gr5_A 359 YGPAESMGFTTHHAVVAGDLSGTALPIGVPLAGKRAYVLDDDLKPAANGA--LGELYVAGAGLAHGYVSRPALTAE 432 (570)
T ss_dssp ECCGGGCSCSEEEECCGGGTTSSSCCCBEECTTEEEEEECTTSCBCCTTC--EEEEEEEETTCCCEETTCHHHHHH
T ss_pred echhhheeeeeeeeecccccCCCccccceeeCCCEEEEECCCCCCCCCCC--cEEEEEeecccchhcCCCchhhhc
Confidence 999999865443221 12234568999999999999999999999999 599999 8999999998743
|
| >3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-55 Score=480.22 Aligned_cols=375 Identities=17% Similarity=0.163 Sum_probs=296.6
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
+++++||++|+++.++ ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||+
T Consensus 39 ~a~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~Gav~vpl 110 (544)
T 3o83_A 39 GVQSHPHSLAIICGER--------QLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVVLNA 110 (544)
T ss_dssp HHHHCTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHhCCCceEEEcCCC--------ceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEecC
Confidence 3478999999999876 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
++.++.+++.+++++++++++|+++..... ........+...... ..+++.... .....+.++......
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~- 180 (544)
T 3o83_A 111 LYSHRQYELNAFIKQIQPKLLIGSRQHEVF-SNNQFIDSLHDVNLSPEIILMLNHQ--------ATDFGLLDWIETPAE- 180 (544)
T ss_dssp CTTCCHHHHHHHHHHHCCSEEEEETTSGGG-SSSHHHHHHHHTTCCCSEEEEETCC--------TTSEEHHHHHHSCCS-
T ss_pred CCCCCHHHHHHHHHhcCeeEEEEccccccc-cHHHHHHHHhhcccCcceEEEecCC--------ccccchhhhhhcccc-
Confidence 999999999999999999999998754210 001122222222222 222221111 011234444333221
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhH--HHHHHHH
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFL 420 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~L~ 420 (592)
.........++++|||+|||||||+||||+++|+++.+.+.+....++++++|++++..|++|.+++. .++.+|+
T Consensus 181 ---~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~ 257 (544)
T 3o83_A 181 ---TFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFMLSSPGALGVLH 257 (544)
T ss_dssp ---SCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHSSHHHHHHH
T ss_pred ---cccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCCCCeEEEecCcceEeecchHHHHHHHH
Confidence 11112345679999999999999999999999999999998888889999999999999988877763 6889999
Q ss_pred cCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 421 ~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
.|+++++.+ .+++..+++.|+++++|++.++|+++..|++.......++++||.+++|||++++++.+++.+.+ ++++
T Consensus 258 ~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~ 335 (544)
T 3o83_A 258 AGGCVVMAP-NPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGASFPESLARQVPEVL-NCKL 335 (544)
T ss_dssp TTCEEEECS-SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSCCCHHHHTHHHHHH-CSEE
T ss_pred cCCEEEECC-CCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCCCCHHHHHHHHHHh-CCcE
Confidence 999999987 46889999999999999999999999999887554455688999999999999999999988876 4899
Q ss_pred eccccchhcccccccCCcCCCCccCcccccC-CCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccc
Q 007715 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADH 574 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~ 574 (592)
+|.||+||+++.+............++|+|+ ++++++|+|++|+++|+|+. |||+| +.||+|+|+.+.....
T Consensus 336 ~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~v~~GY~~~~~~t~~~f~ 413 (544)
T 3o83_A 336 QQVFGMAEGLVNYTRLDDSDEQIFTTQGRPISSDDEIKIVDEQYREVPEGEI--GMLATRGPYTFCGYYQSPEHNSQVFD 413 (544)
T ss_dssp EEEEECTTSCEEECCTTSCHHHHHHCCCEESCTTCEEEEECTTSCBCCTTCC--EEEEEECTTSCSCCTTCHHHHHHHBC
T ss_pred EeeeccccccceeecCCCchhhccCCCceecCCCcEEEEECCCCCCCCCCCe--eEEEEecCCcchhhcCChhhhhhhCC
Confidence 9999999987544332222223457899997 89999999999999999995 99999 7899999998855543
Q ss_pred ccccc-ccCcC
Q 007715 575 EEVYF-RGMPM 584 (592)
Q Consensus 575 ~~~~f-~~~~~ 584 (592)
.+.|| +||-+
T Consensus 414 ~~g~~~TGDlg 424 (544)
T 3o83_A 414 EDNYYYSGDLV 424 (544)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCCeEcCCEE
Confidence 34444 44433
|
| >1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-55 Score=481.64 Aligned_cols=370 Identities=15% Similarity=0.126 Sum_probs=293.0
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||++
T Consensus 35 a~~~p~~~A~~~~~~--------~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~ 106 (539)
T 1mdb_A 35 AAKYGDRIAITCGNT--------HWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFAL 106 (539)
T ss_dssp HHHHTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECC
T ss_pred HHHCCCCEEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeEEecCC
Confidence 378999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
|.++.+++.+++++++++++|+++..... ........+....+. ..+++.... ..+.++......
T Consensus 107 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-- 172 (539)
T 1mdb_A 107 PSHRSSEITYFCEFAEAAAYIIPDAYSGF-DYRSLARQVQSKLPTLKNIIVAGEA-----------EEFLPLEDLHTE-- 172 (539)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEESEETTE-EHHHHHHHHHHHCTTCCCEEEESCC-----------TTSEEGGGCCCC--
T ss_pred CCCCHHHHHHHHHhCCCCEEEeccccccc-cHHHHHHHHHhcCCCccEEEEcCCc-----------cchhhhhhcccc--
Confidence 99999999999999999999998753110 000112222222222 122221110 012222221111
Q ss_pred CCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhH--HHHHHHHc
Q 007715 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLN 421 (592)
Q Consensus 344 ~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~L~~ 421 (592)
........++++|||+|||||||+||||+++|+++++.+.+....++++++|++++.+|++|+.++. .++.+|+.
T Consensus 173 ---~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~ 249 (539)
T 1mdb_A 173 ---PVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYA 249 (539)
T ss_dssp ---CCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHT
T ss_pred ---ccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchhhHHHHHHHHHh
Confidence 1112345678999999999999999999999999998888887888999999999999999998875 58999999
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|+++++.+ .+++..+++.|+++++|++.++|+++..|++.......++++||.+++|||++++++.+++.+.++ ++++
T Consensus 250 G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~-~~~~ 327 (539)
T 1mdb_A 250 GGRVVLSP-SPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFG-CTLQ 327 (539)
T ss_dssp TCEEEECS-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSCCCHHHHTTHHHHTC-SEEE
T ss_pred CCEEEECC-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCCCCHHHHHHHHHHhC-CcEE
Confidence 99999987 578899999999999999999999999998765444567899999999999999999998887774 8899
Q ss_pred ccccchhcccccccCCcCCCCccCcccccCCCc-eEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccc
Q 007715 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA-GLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~-~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~ 575 (592)
|.||+||+++.+...........+++|+|+++. +++|+|++|+++|+|+. |||+| ++||+|+|+.+......
T Consensus 328 ~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~v~~GY~~~~~~t~~~f~~ 405 (539)
T 1mdb_A 328 QVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRVWDDHDRDVKPGET--GHLLTRGPYTIRGYYKAEEHNAASFTE 405 (539)
T ss_dssp EEEECTTSCEEECCTTSCHHHHHHCCCEESSTTCEEEEECTTSCBCCTTCC--EEEEEECTTSCSSCTTCHHHHHHHBCT
T ss_pred EEEcCCCCcccccCCCCcHHhcCCCCCcccCCCceEEEECCCCCCCcCCCc--ceEEeeCcccchhhcCChhhhhhhccC
Confidence 999999976433221111122357899999764 89999999999999995 99999 78999999987554433
Q ss_pred cccc-ccCcC
Q 007715 576 EVYF-RGMPM 584 (592)
Q Consensus 576 ~~~f-~~~~~ 584 (592)
+.|| +||-+
T Consensus 406 ~g~~~TGDlg 415 (539)
T 1mdb_A 406 DGFYRTGDIV 415 (539)
T ss_dssp TSCEEEEEEE
T ss_pred CCCeecCceE
Confidence 3444 44433
|
| >3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-55 Score=478.88 Aligned_cols=347 Identities=19% Similarity=0.230 Sum_probs=288.3
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|+++||++
T Consensus 11 a~~~p~~~A~~~~~~--------~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~vpl~ 82 (512)
T 3fce_A 11 AAETPDQTAFVWRDA--------KITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYIPVD 82 (512)
T ss_dssp HHHSTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHCCCceEEEeCCc--------eEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEeeC
Confidence 478999999999877 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+.++.+++.+++++++++++|++...... .... .++. ...+.++......
T Consensus 83 ~~~~~~~l~~il~~~~~~~~i~~~~~~~~------------~~~~--~~~~-------------~~~~~~~~~~~~~--- 132 (512)
T 3fce_A 83 LSIPADRVQRIAENSGAKLLLSATAVTVT------------DLPV--RIVS-------------EDNLKDIFFTHKG--- 132 (512)
T ss_dssp TTSCHHHHHHHHHHSCCCEEEESSCCCSS------------CCSS--EEEE-------------THHHHHHHHHTTT---
T ss_pred CCCcHHHHHHHHHhcCCCEEEecCccccc------------cccc--ceec-------------hhhhhhhcccccc---
Confidence 99999999999999999999998642110 0000 0110 0112222211111
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCE
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (592)
....+.....+++++||+|||||||.||||+++|+++.+.+.+....++++++|++++.+|++|+.+++.++.+++.|++
T Consensus 133 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~ 212 (512)
T 3fce_A 133 NTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGT 212 (512)
T ss_dssp CCCCGGGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCE
T ss_pred cCCCccccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCE
Confidence 11112334567999999999999999999999999999998888888999999999999999999999889999999999
Q ss_pred EEEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceec
Q 007715 425 LALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (592)
Q Consensus 425 lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (592)
+++.+.. .++..+++.|+++++|++.++|+++..++........++++||.+++|||++++++.+++.+.+++++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~ 292 (512)
T 3fce_A 213 LWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMN 292 (512)
T ss_dssp EEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEE
T ss_pred EEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEe
Confidence 9998742 47889999999999999999999999998876666677899999999999999999999999988899999
Q ss_pred cccchhcccccccCCcC----CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccc
Q 007715 503 SCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNA 572 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~ 572 (592)
.||+||+++.++..... ......++|+|+++++++|+|++|+++|+|+. |||+| +.||+|+|+.+...
T Consensus 293 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~--GEl~v~g~~v~~GY~~~~~~t~~~ 369 (512)
T 3fce_A 293 TYGPTEATVAVTGIHVTEEVLDQYKSLPVGYCKSDCRLLIMKEDGTIAPDGEK--GEIVIVGPSVSVGYLGSPELTEKA 369 (512)
T ss_dssp EECCGGGSSCSEEEECCHHHHHHCSSCCCEEECTTCEEEEECSSSCBCCTTSC--EEEEEESTTSCSCBTTCHHHHHHH
T ss_pred CcccChhhhheeeEEeccccccccCCCccccccCCcEEEEECCCCCCCCCCCe--EEEEEeccccChhhcCCchhhhhc
Confidence 99999998654432221 12245789999999999999999999999995 99999 79999999987443
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-54 Score=480.82 Aligned_cols=364 Identities=15% Similarity=0.156 Sum_probs=290.5
Q ss_pred CCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCC
Q 007715 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268 (592)
Q Consensus 190 pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~ 268 (592)
||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+|+|+++||+||.+|
T Consensus 39 pd~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA~l~aG~~~vpl~~~~~ 110 (617)
T 3rg2_A 39 SDSIAVIDGER--------QLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQ 110 (617)
T ss_dssp CCSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEEECTTCC
T ss_pred CCCeEEecCCc--------eEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhcCeEEccCCcccc
Confidence 99999999877 999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC-cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCC
Q 007715 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY 347 (592)
Q Consensus 269 ~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (592)
.+++.++++++++++++++....... .......+....+. ..+.+... .....+.+....... .
T Consensus 111 ~~~l~~~l~~~~~~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-----~ 175 (617)
T 3rg2_A 111 RSELNAYASQIEPALLIADRQHALFS-GDDFLNTFVTEHSSIRVVQLLND---------SGEHNLQDAINHPAE-----D 175 (617)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSGGGS-SSHHHHHHHHHSTTCCEEEEETC---------CSTTBHHHHHHSCCS-----S
T ss_pred HHHHHHHHhhcCceEEEecccccccc-cHHHHHHHhhcCCccceeeeccc---------ccccchhhhhccccc-----c
Confidence 99999999999999999997542100 00111222222222 22222111 111234444333221 1
Q ss_pred CCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh--HHHHHHHHcCCEE
Q 007715 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP--VILFSSFLNGATL 425 (592)
Q Consensus 348 ~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~--~~~~~~L~~G~~l 425 (592)
.......++++|||+|||||||+||||+++|+++++.+.+....++++++|++++.+|++|.++. ++++.+|+.|+++
T Consensus 176 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~ 255 (617)
T 3rg2_A 176 FTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTV 255 (617)
T ss_dssp CCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEE
T ss_pred cCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEE
Confidence 22334567999999999999999999999999999999888888999999999999997776555 4789999999999
Q ss_pred EEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC--CCCCCccccEEEEecCCCChhhHHHHHHhccCCceecc
Q 007715 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (592)
Q Consensus 426 vl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~--~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (592)
++.+ ..++..+++.|+++++|++.++|+++..|.+.... ...++++||.+++|||++++++.+++...++ ++++|.
T Consensus 256 v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~-~~~~~~ 333 (617)
T 3rg2_A 256 VLAA-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIG-CQLQQV 333 (617)
T ss_dssp EECS-SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCCCHHHHHHHHHHTC-SEEEEE
T ss_pred EEeC-CCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcCCHHHHHHHHHHhC-CcEEEE
Confidence 9987 46788899999999999999999999998875322 2336899999999999999999999887764 899999
Q ss_pred ccchhcccccccCCcCCCCccCcccccC-CCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccc
Q 007715 504 CGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (592)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~ 577 (592)
||+||+++.++...........++|+|+ ++++++|+|++|+++|+|++ |||+| ++||+|+|+.|...+..+.
T Consensus 334 YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~p~G~~--GEl~i~G~~v~~GY~~~p~~t~~~f~~~~ 411 (617)
T 3rg2_A 334 FGMAEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEV--GRLMTRGPYTFRGYYKSPQHNASAFDANG 411 (617)
T ss_dssp EEETTEEEEECCTTSCHHHHHHCCCEESCTTCEEEEECTTSCBCCTTCC--EEEEEECSSSCSCCTTCHHHHHHHBCTTS
T ss_pred eccCcceeecccCCCcccccccCCCccCCCCceEEEECCCCCCCCCCCc--eEEEecCccccchhcCChhhhhhccCCCC
Confidence 9999998654332222222346899998 78899999999999999995 99998 8999999998855543444
Q ss_pred ccc
Q 007715 578 YFR 580 (592)
Q Consensus 578 ~f~ 580 (592)
||+
T Consensus 412 ~yr 414 (617)
T 3rg2_A 412 FYC 414 (617)
T ss_dssp CEE
T ss_pred cee
Confidence 443
|
| >3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-55 Score=476.93 Aligned_cols=364 Identities=21% Similarity=0.167 Sum_probs=293.1
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+. .+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||||
T Consensus 26 a~~~p~~~A~~~~~~------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 99 (517)
T 3r44_A 26 ATVSPRLQAYVEPST------DVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPIN 99 (517)
T ss_dssp HHHSTTSEEEEEGGG------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECC
T ss_pred HHhCCCCeEEEeCCc------CceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Confidence 478999999998653 24899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
|.++.+++.+++++++++++|++.... +....+...... .++.+. ....+.+.......
T Consensus 100 ~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~- 160 (517)
T 3r44_A 100 TRLAAPEVSFILSDSGSKVVIYGAPSA------PVIDAIRAQADPPGTVTDWI------------GADSLAERLRSAAA- 160 (517)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGH------HHHHHHHHSSSCCTTCCEEE------------EHHHHHHHHHHCCC-
T ss_pred cccCHHHHHHHHHhcCceEEEECCchH------HHHHHHHhccCCccEEEEcc------------CcccHHHHhhccCc-
Confidence 999999999999999999999987532 222222221111 111110 01123343332221
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcC
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (592)
..+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|+.++..++.+++.|
T Consensus 161 ----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~~G 236 (517)
T 3r44_A 161 ----DEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFSAMRG 236 (517)
T ss_dssp ----CCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHHHHHHHHHHT
T ss_pred ----CCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHhcC
Confidence 1223345679999999999999999999999999999888888888999999999999999999998766777799
Q ss_pred CEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceec
Q 007715 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (592)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (592)
+++++.+ .+++..+++.|+++++|++.++|+++..|.+.......++++||.+++|||++++++.+++... +++++|
T Consensus 237 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~--~~~~~~ 313 (517)
T 3r44_A 237 VTLISMP-QFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYAAK--NIEVVQ 313 (517)
T ss_dssp CEEEECS-SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTTCCEEEECSSCCCHHHHHHHHHT--TCEEEE
T ss_pred eEEEEeC-CCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCcccEEEECCCCCCHHHHHHHHhc--CCcEEE
Confidence 9999987 5789999999999999999999999999987655445668899999999999999999988876 589999
Q ss_pred cccchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccc
Q 007715 503 SCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEE 576 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~ 576 (592)
.||+||+++..+..... .....+++|+|+++++++|+|++|+++|.| + |||+| ++||+|+|+.+...+...
T Consensus 314 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g-~--GEl~v~g~~v~~GY~~~p~~t~~~f~~g 390 (517)
T 3r44_A 314 GYALTESCGGGTLLLSEDALRKAGSAGRATMFTDVAVRGDDGVIREHG-E--GEVVIKSDILLKEYWNRPEATRDAFDNG 390 (517)
T ss_dssp EEECGGGTTCEEEECGGGTTTTTTCCBEECTTEEEEEECTTSCEESSE-E--EEEEEEETTSCSEETTCHHHHHHTEETT
T ss_pred eecccccccceeecCCccccccCCCCCcCCCCeEEEEECCCCCCCCCC-C--eEEEEeCcchhhhhCCChhhhHhhhcCC
Confidence 99999998654433322 244568999999999999999999999998 3 99999 889999999885444344
Q ss_pred cccccCcC
Q 007715 577 VYFRGMPM 584 (592)
Q Consensus 577 ~~f~~~~~ 584 (592)
||-+||-+
T Consensus 391 ~~~TGDl~ 398 (517)
T 3r44_A 391 WFRTGDIG 398 (517)
T ss_dssp EEEEEEEE
T ss_pred CEecceeE
Confidence 44444443
|
| >3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-55 Score=479.04 Aligned_cols=376 Identities=16% Similarity=0.160 Sum_probs=293.7
Q ss_pred CCCCCceEEE---EeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 007715 187 RKEDNTVAIV---WREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (592)
Q Consensus 187 ~~~pd~~Al~---~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vp 262 (592)
+++||++|++ +... .+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||
T Consensus 31 ~~~p~~~a~~a~~~~~~------~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vp 104 (550)
T 3rix_A 31 KRYALVPGTIAFTDAHI------EVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAP 104 (550)
T ss_dssp HHHHTSTTCEEEEETTT------CCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCEEEE
T ss_pred HhCCCCceEEEeeecCC------CcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHHHHHHHHHHcCCEEee
Confidence 6788888865 3211 13899999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCC
Q 007715 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVD 340 (592)
Q Consensus 263 ld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (592)
+||.++.+++.+++++++++++|+++... +....+....+. .++++..... ..+...+.++.....
T Consensus 105 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 172 (550)
T 3rix_A 105 ANDIYNERELLNSMNISQPTVVFVSKKGL------QKILNVQKKLPIIQKIIIMDSKTD------YQGFQSMYTFVTSHL 172 (550)
T ss_dssp CCTTCCHHHHHHHHHHHCCSEEEECGGGH------HHHHHHHHHCTTCCEEEETTCSSC------BTTBCBHHHHHHHHC
T ss_pred cCCcCCHHHHHHHHHhcCCeEEEEcHHHH------HHHHHHHhhCCCcceEEEEcCCcc------ccCcccHHHHhhccc
Confidence 99999999999999999999999998532 222333333332 2222221111 123345555554322
Q ss_pred CCCC-CCCC-CCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhh---cCCCCCCEEEEecccchhchhHHH
Q 007715 341 YHPR-PNYY-SPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---IDLKVGDVYCWPTNLGWVMGPVIL 415 (592)
Q Consensus 341 ~~~~-~~~~-~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~~ 415 (592)
.... .... +.....++++|||+|||||||+||||+++|+++.+.+.+.... +++.++|++++.+|++|+.+++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 252 (550)
T 3rix_A 173 PPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTT 252 (550)
T ss_dssp CTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHH
T ss_pred cccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHHH
Confidence 1000 0011 1122235789999999999999999999999998877665544 568899999999999999999888
Q ss_pred HHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhc
Q 007715 416 FSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (592)
Q Consensus 416 ~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~ 495 (592)
+.+++.|+++++.+ .+++..+++.|+++++|++.++|+++..|++.......++++||.+++|||++++++.+++.+.+
T Consensus 253 ~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~ 331 (550)
T 3rix_A 253 LGYLICGFRVVLMY-RFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEVGEAVAKRF 331 (550)
T ss_dssp HHHHHHTCEEEECS-SCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTTCCEEEECSSCCCHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEeC-CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcccccEEEEecCCCCHHHHHHHHHHc
Confidence 99999999999986 57889999999999999999999999999988766667789999999999999999999999888
Q ss_pred cCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhh
Q 007715 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (592)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~ 569 (592)
+...++|.||+||+++.++.. .......+++|+|+++++++|+| ++|+++|+|+. |||+| ++||+|+|+.+
T Consensus 332 ~~~~v~~~YG~TE~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~~g~~--GEl~v~g~~v~~GY~~~~~~t 408 (550)
T 3rix_A 332 HLPGIRQGYGLTETTSAILIT-PEGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQR--GELCVRGPMIMSGYVNNPEAT 408 (550)
T ss_dssp TCSCCEEEEECGGGSSEEEEC-CTTCCCTTEEEEECTTCEEEEECTTTCCBCCTTCC--EEEEEESTTSCSEETTCHHHH
T ss_pred CCCccccccCcCccccceecC-CCCCCCCCCcccccCCcEEEEEeCCCCcCCCCCCC--eEEEEeCCCcchhhcCChhhh
Confidence 755699999999998654443 33345678999999999999999 67999999995 99999 79999999988
Q ss_pred cccccccccc-ccCcC
Q 007715 570 LNADHEEVYF-RGMPM 584 (592)
Q Consensus 570 ~~~~~~~~~f-~~~~~ 584 (592)
......+.|| +||-+
T Consensus 409 ~~~~~~~g~~~TGDl~ 424 (550)
T 3rix_A 409 NALIDKDGWLHSGDIA 424 (550)
T ss_dssp HHHBCTTSCEEEEEEE
T ss_pred hhhcCCCCCeecCcEE
Confidence 5444334444 44433
|
| >1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-54 Score=473.90 Aligned_cols=370 Identities=20% Similarity=0.194 Sum_probs=292.6
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+. +..+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||++
T Consensus 28 a~~~p~~~a~~~~~~----~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~ 103 (541)
T 1v25_A 28 AALFGRKEVVSRLHT----GEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTAN 103 (541)
T ss_dssp HHHSTTCEEEEECTT----SCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhCCCceEEEEecC----CCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEEecC
Confidence 378999999996321 1234899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
|.++.+++.++++++++++||+++... +....+....+. .++++.... ..+...++++......
T Consensus 104 ~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~- 169 (541)
T 1v25_A 104 PRLSPKEIAYILNHAEDKVLLFDPNLL------PLVEAIRGELKTVQHFVVMDEKA-------PEGYLAYEEALGEEAD- 169 (541)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGH------HHHHHHGGGCSSCCEEEESSSCC-------CTTCEEHHHHCCSCCC-
T ss_pred cccCHHHHHHHHHhCCCcEEEEChhHH------HHHHHHHhhCCCccEEEEecCCC-------CcccccHHHHhhccCC-
Confidence 999999999999999999999987532 222333333332 122222110 0123356665443221
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHH--hhhhcCCCCCCEEEEecccchhchhHHHHHHHH
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE--GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (592)
.....+++++||+|||||||+||||+++|+++++.... ....++++++|++++.+|++|+.++..++.+++
T Consensus 170 -------~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~ 242 (541)
T 1v25_A 170 -------PVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPYAATL 242 (541)
T ss_dssp -------CCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHTHHHHHHH
T ss_pred -------cccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHHHHHHHHHh
Confidence 12345689999999999999999999999999876655 234567889999999999999999877889999
Q ss_pred cCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 421 ~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
.|+++++.+..+++..+++.|+++++|++.++|+++..|++.......++++||.+++|||++++++.+++ ..+ ++++
T Consensus 243 ~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~-~~~-g~~~ 320 (541)
T 1v25_A 243 VGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARF-ERM-GVEV 320 (541)
T ss_dssp HTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTCCCSSCCEEEECSSCCCHHHHHHH-HHT-TCEE
T ss_pred cCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCCcchhccEEEECCCCCCHHHHHHH-HHh-CCce
Confidence 99999998755689999999999999999999999999987644344568999999999999999999888 444 5889
Q ss_pred eccccchhcccccccCCcCC----------CCccCcccccCCCceEEEECCCCCCCCC-C-CCcceeEEE-----ecccC
Q 007715 501 IESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDECGVPYPD-D-QPCVGEVGL-----FPLYL 563 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~~~~v~IlD~~g~~vp~-G-~~giGel~v-----~~gY~ 563 (592)
+|.||+||++.+++...... ....+++|+|++|++++|+|++|+++|. | + +|||+| ++||+
T Consensus 321 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~~~~~--~GEl~v~g~~v~~GY~ 398 (541)
T 1v25_A 321 RQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVADEEGRPVPKDGKA--LGEVQLKGPWITGGYY 398 (541)
T ss_dssp EEEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEECTTSCBCCSSSCC--CEEEEEESTTSBSSCB
T ss_pred eecccccccccceecccccccccccCccccccccCCCCCcCCCcEEEEECCCCCCCCCCCCc--ceEEEEeCcchhcccc
Confidence 99999999986544432210 0235789999999999999999999995 3 4 599999 88999
Q ss_pred CCchhhcccccccccc-ccCcC
Q 007715 564 GASDRLLNADHEEVYF-RGMPM 584 (592)
Q Consensus 564 ~~~~~~~~~~~~~~~f-~~~~~ 584 (592)
|+|+.+......+.|| +||-+
T Consensus 399 ~~p~~t~~~f~~~g~~~TGDlg 420 (541)
T 1v25_A 399 GNEEATRSALTPDGFFRTGDIA 420 (541)
T ss_dssp TCHHHHHTTBCTTSCEEEEEEE
T ss_pred CChhhhhhhccCCCCeEcCCEE
Confidence 9999885544323444 44433
|
| >3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-54 Score=470.89 Aligned_cols=394 Identities=19% Similarity=0.229 Sum_probs=306.4
Q ss_pred CCccCCCCcchhhhhhccccc---cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh--cCCCCEEEE
Q 007715 164 GGTWLPGSVLNIAECCLLPSN---HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAI 238 (592)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~---~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~--v~~gd~V~i 238 (592)
...|..+...+....++.+++ +++++||++|+++.+. .+..+++||+||+++++++|++|++. +++||+|+|
T Consensus 28 ~~~~~~~~~~~~~~~~l~~~a~~~~a~~~p~~~al~~~~~---~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i 104 (570)
T 3c5e_A 28 WGHQEVPAKFNFASDVLDHWADMEKAGKRPPSPALWWVNG---KGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAV 104 (570)
T ss_dssp CCBCCCCSBCCHHHHTHHHHHHHHHTTSSCCCEEEEEECS---SSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEE
T ss_pred cccccCCccccHHHHHHHHHHhhccccCCCCceEEEEEcC---CCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEE
Confidence 335655555566555565543 1234999999998542 11235899999999999999999986 999999999
Q ss_pred EcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcC
Q 007715 239 DMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPA 316 (592)
Q Consensus 239 ~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ 316 (592)
+++|++++++++|||+++|+++||+|+.++.+++.++++++++++||+++... +....+....+. .++++..
T Consensus 105 ~~~n~~e~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 178 (570)
T 3c5e_A 105 VLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVI------QEVDTVASECPSLRIKLLVSE 178 (570)
T ss_dssp ECCSCHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTH------HHHHHHGGGCTTCCEEEEESS
T ss_pred EcCCCHHHHHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHH------HHHHHHhhcCCceeEEEEecc
Confidence 99999999999999999999999999999999999999999999999987532 222222333332 2333321
Q ss_pred CCCCCCCCCccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHH--HHHHhhhhcCC
Q 007715 317 IGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR--CTAEGWAHIDL 394 (592)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~--~~~~~~~~~~~ 394 (592)
.. ..+...++++...... ........++++|||+|||||||+||||+++|+ ++. ...+. ..+++
T Consensus 179 ~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~~~ 244 (570)
T 3c5e_A 179 KS-------CDGWLNFKKLLNEAST-----THHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWTGL 244 (570)
T ss_dssp SC-------CTTSEEHHHHHHHSCS-----CCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTTSC
T ss_pred cC-------ccccccHHHHhhcccc-----cccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhcCC
Confidence 10 1123356666543322 111233457999999999999999999999999 444 44444 66788
Q ss_pred CCCCEEEEecccchhchhH-HHHHHHHcCCEEEEeCC-CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCcc
Q 007715 395 KVGDVYCWPTNLGWVMGPV-ILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472 (592)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~~lvl~~~-~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~s 472 (592)
+++|++++.+|++|+.+++ .++.+|..|+++++.+. .+++..+++.|+++++|++.++|+++..|.+.. ....++++
T Consensus 245 ~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~ 323 (570)
T 3c5e_A 245 QASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD-LSSYKFPH 323 (570)
T ss_dssp CTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC-TTTCCCTT
T ss_pred CCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc-cccccccc
Confidence 9999999999999999985 68899999999999864 568899999999999999999999999999763 33456899
Q ss_pred ccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCc
Q 007715 473 IRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (592)
Q Consensus 473 Lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~g 552 (592)
||.+++|||++++++.+++...+ +++++|.||+||+++.++.. .......+++|+|++|++++|+|++|+++|+|+.
T Consensus 324 lr~i~~gGe~l~~~~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~-~~~~~~~~~vG~p~~~~~v~i~d~~g~~~~~G~~- 400 (570)
T 3c5e_A 324 LQNCVTVGESLLPETLENWRAQT-GLDIRESYGQTETGLTCMVS-KTMKIKPGYMGTAASCYDVQIIDDKGNVLPPGTE- 400 (570)
T ss_dssp CCEEEEESSCCCHHHHHHHHHHH-SCCCEEEEEETTTEEEEECC-TTSCCCTTCCCEECTTCCEEEECTTSCBCCTTCC-
T ss_pred ceEEEEcCCcCCHHHHHHHHHHh-CCchhhccchhhcccceecC-cccccCCCcccccCCCceEEEECCCCCCCCCCCC-
Confidence 99999999999999999988776 47899999999998654332 2223456899999999999999999999999995
Q ss_pred ceeEEEe----------cccCCCchhhccccccccccccCcCC
Q 007715 553 VGEVGLF----------PLYLGASDRLLNADHEEVYFRGMPMY 585 (592)
Q Consensus 553 iGel~v~----------~gY~~~~~~~~~~~~~~~~f~~~~~~ 585 (592)
|||+|. +||+|+|+.+......+||.+||-++
T Consensus 401 -GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~~~~~~TGDlg~ 442 (570)
T 3c5e_A 401 -GDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWLLGDRGI 442 (570)
T ss_dssp -EEEEEECSSBCCTTCCCEETTCHHHHHHTEETTEEEEEEEEE
T ss_pred -CeeEEeccCCCCchhhccccCChhHhhhhhcCCccccceeEE
Confidence 999984 69999999875544444555555443
|
| >2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-54 Score=470.58 Aligned_cols=370 Identities=18% Similarity=0.136 Sum_probs=294.4
Q ss_pred CCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCC
Q 007715 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (592)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~ 265 (592)
+++ |++|+++.+.+ +++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|+++||++|
T Consensus 37 ~~~-~~~A~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~la~~~~Gav~vpl~~ 109 (548)
T 2d1s_A 37 AKL-GAIAFTNAVTG------VDYSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNE 109 (548)
T ss_dssp HHH-TCEEEEETTTC------CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCEEEEECT
T ss_pred ccc-CCceEEEcCCC------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhhCCEEeccCC
Confidence 567 99999974210 2899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC--CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCC
Q 007715 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (592)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (592)
.++.+++.++++++++++||+++... +....+....+ ..++++.... ...+...|+++......
T Consensus 110 ~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-- 175 (548)
T 2d1s_A 110 IYTLRELVHSLGISKPTIVFSSKKGL------DKVITVQKTVTTIKTIVILDSKV------DYRGYQCLDTFIKRNTP-- 175 (548)
T ss_dssp TSCHHHHHHHHHHHCCSEEEECTTTH------HHHHHHHHHSTTCCEEEETTCSS------CBTTBCBHHHHHHHTSC--
T ss_pred CCCHHHHHHHHHhcCCeEEEEcHHHH------HHHHHHhcCCCCCCEEEEeCCcc------cccccccHHHHHhcCcc--
Confidence 99999999999999999999998532 12222222232 1222222110 00122346666544321
Q ss_pred CCCCCCCCCC------CCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhh---cCCCCCCEEEEecccchhchhHH
Q 007715 344 RPNYYSPVYN------PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---IDLKVGDVYCWPTNLGWVMGPVI 414 (592)
Q Consensus 344 ~~~~~~~~~~------~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~ 414 (592)
. ..+.... .++++|||+|||||||+||||+++|+++.+.+.+.... ++++++|++++.+|++|+.+++.
T Consensus 176 ~--~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~ 253 (548)
T 2d1s_A 176 P--GFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFT 253 (548)
T ss_dssp T--TCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHH
T ss_pred c--cCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHH
Confidence 0 0111111 23899999999999999999999999998888776655 67889999999999999999866
Q ss_pred -HHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHH
Q 007715 415 -LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (592)
Q Consensus 415 -~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~ 493 (592)
++.++ .|+++++.+ .+++..+++.|+++++|++.++|+++..|.+.......++++||.+++|||++++++.+++.+
T Consensus 254 ~~~~~l-~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~ 331 (548)
T 2d1s_A 254 TLGYLI-CGFRVVMLT-KFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIASGGAPLSKEVGEAVAR 331 (548)
T ss_dssp HHHHHH-TTCEEEECC-CCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTTCCEEEECSSCCCHHHHHHHHH
T ss_pred HHHHHh-cCcEEEEcC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccceeEEEEcCccCCHHHHHHHHH
Confidence 55666 999999987 578999999999999999999999999999876555567899999999999999999999998
Q ss_pred hccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCch
Q 007715 494 KAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASD 567 (592)
Q Consensus 494 ~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~ 567 (592)
.+++++++|.||+||++..++. ........+++|+|+++++++|+| ++|+++|+|+. |||+| ++||+|+|+
T Consensus 332 ~~~~~~i~~~YG~TE~~~~~~~-~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--GEl~v~g~~v~~GY~~~~~ 408 (548)
T 2d1s_A 332 RFNLPGVRQGYGLTETTSAIII-TPEGDDKPGASGKVVPLFKAKVIDLDTKKSLGPNRR--GEVCVKGPMLMKGYVNNPE 408 (548)
T ss_dssp HTTCSCCEEEEECGGGSSEEEE-CCTTCCCTTCCBEECTTCEEEEECTTTCCBCCTTCC--EEEEEESTTSCSEETTCHH
T ss_pred HcCCCceeeccccccccceeee-cCcccCCCCCCCccCCCceEEEEeCCcCccCCCCCC--eEEEECCHHHhhhhcCChH
Confidence 8877889999999999865443 222334568999999999999999 78999999995 99999 789999999
Q ss_pred hhcccccccccc-ccCcC
Q 007715 568 RLLNADHEEVYF-RGMPM 584 (592)
Q Consensus 568 ~~~~~~~~~~~f-~~~~~ 584 (592)
.+......+.|| +||-+
T Consensus 409 ~t~~~f~~~g~~~TGDl~ 426 (548)
T 2d1s_A 409 ATKELIDEEGWLHTGDIG 426 (548)
T ss_dssp HHHHHBCTTSCEEEEEEE
T ss_pred HhhhcccCCcEEEccCEE
Confidence 875444333444 44433
|
| >3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-54 Score=468.03 Aligned_cols=362 Identities=13% Similarity=0.058 Sum_probs=289.5
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|+++||+|
T Consensus 16 a~~~pd~~Al~~~~~--------~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~ 87 (509)
T 3ivr_A 16 AALFPDRTAFMVDGV--------RLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGAILLPVN 87 (509)
T ss_dssp HHHSTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHCCCceEEEECCc--------EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Confidence 478999999999776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
|.++.+++.++++++++++||++.... ..........+....++.... ....+.++......
T Consensus 88 ~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--- 149 (509)
T 3ivr_A 88 YRLNADEIAFVLGDGAPSVVVAGTDYR------DIVAGVLPSLGGVKKAYAIGD---------GSGPFAPFKDLASD--- 149 (509)
T ss_dssp TTSCHHHHHHHHHHHCEEEEEECSTTH------HHHHHHGGGCSSCCEEEESSC---------CCSSCEEGGGTCCC---
T ss_pred CCCCHHHHHHHHHhcCceEEEECcchh------hhHHhhhcccCCceEEEEcCC---------CCcChhhHhhccCC---
Confidence 999999999999999999999987632 111112222222212221111 11122222221111
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCE
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (592)
.........++|++||+|||||||.||||+++|+++++.+.+....++++++|++++.+|++|+.++..++.+++.|++
T Consensus 150 -~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~ 228 (509)
T 3ivr_A 150 -TPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTGLGLMLTLQQAGGA 228 (509)
T ss_dssp -SCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCE
T ss_pred -CCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEeCCCcchhHHHHHHHHHHhCCc
Confidence 1122334567999999999999999999999999999998888888999999999999999999999887777777877
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 425 lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
.++.. .+++..+++.|+++++|++.++|+++..|++.. ...++++||.++.+|++ ++.+++...+++++++|.|
T Consensus 229 ~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~Y 302 (509)
T 3ivr_A 229 SVIAA-KFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA--APAQLASLRAVTGLDTP---ETIERFEATCPNATFWATF 302 (509)
T ss_dssp EEECS-SCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC--CGGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEEEE
T ss_pred EEEec-ccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc--cccchhhhheecccCCh---HHHHHHHHhcCCCeEEccc
Confidence 77776 678999999999999999999999999998875 34557899999999987 7778888888789999999
Q ss_pred cchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccccccc
Q 007715 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (592)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~f 579 (592)
|+||++++++..... ....++|+|++|++++|+|++|+++|+|++ |||+| ++||+++|+.+.......||-
T Consensus 303 G~TE~~~~~~~~~~~--~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~~~~gY~~~~~~t~~~f~~g~~~ 378 (509)
T 3ivr_A 303 GQSETSGLSTFAPYR--DRPKSAGRPLFWRTVAVVDAEDRPLPPGEV--GEIVLRGPTVFKGYWNNAAATQHAFRNGWHH 378 (509)
T ss_dssp EEGGGTEEEEEEEGG--GSTTSCCEECTTCEEEEECTTSCBCCTTCC--EEEEEESTTSCCEETTCHHHHHHHTGGGSEE
T ss_pred CccccccccccCccc--cCCCcccccCCCcEEEEECCCCCCCCCCCc--eEEEEecCCccccccCCHHHhHHHhhcCCcc
Confidence 999998754443222 233569999999999999999999999995 99999 889999999875444344444
Q ss_pred ccCcC
Q 007715 580 RGMPM 584 (592)
Q Consensus 580 ~~~~~ 584 (592)
+||-+
T Consensus 379 TGDl~ 383 (509)
T 3ivr_A 379 TGDMG 383 (509)
T ss_dssp EEEEE
T ss_pred cccEE
Confidence 44443
|
| >2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-54 Score=466.39 Aligned_cols=380 Identities=19% Similarity=0.193 Sum_probs=292.0
Q ss_pred chhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHH
Q 007715 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251 (592)
Q Consensus 173 ~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~l 251 (592)
.+.....+.+++ + +||++|+++.+. ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|
T Consensus 23 ~~~~~~~l~~~~--~-~p~~~A~~~~~~--------~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~l 91 (529)
T 2v7b_A 23 FNFAAYLFRLNE--T-RAGKTAYIDDTG--------STTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFL 91 (529)
T ss_dssp CCHHHHHHHHTG--G-GTTSEEEECSSC--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHH
T ss_pred eeHHHHHHHhhh--c-cCCceEEEeCCC--------CccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 344444554444 6 999999998765 999999999999999999999 9999999999999999999999
Q ss_pred HHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC---CcEEEEcCCCCCCCCCCccC
Q 007715 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---LKAIVLPAIGNDVGIPLREQ 328 (592)
Q Consensus 252 A~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~ 328 (592)
||+++|+++||+++.++.+++.+++++++++++|+++... +......+..+ ..++++...... ...
T Consensus 92 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 160 (529)
T 2v7b_A 92 GALYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALV------QNVTQALESAEHDGCQLIVSQPRESE-----PRL 160 (529)
T ss_dssp HHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGH------HHHHHHHHCC---CCEEEEECC-----------C
T ss_pred HHHHcCceEEecCcccCHHHHHHHHhccCCeEEEechhhh------hHHHHHHhhccccCceEEEecccccc-----ccc
Confidence 9999999999999999999999999999999999987532 12222222111 222222211000 001
Q ss_pred cccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchH-HHHHHHhhhhcCCCCCCEEEEecccc
Q 007715 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSS-IRCTAEGWAHIDLKVGDVYCWPTNLG 407 (592)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l-~~~~~~~~~~~~~~~~d~~l~~~~~~ 407 (592)
...++++...... ........++|++||+|||||||+||||+++|+++ .+........++++++|++++.+|++
T Consensus 161 ~~~~~~~~~~~~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~~d~~~~~~p~~ 235 (529)
T 2v7b_A 161 APLFEELIDAAAP-----AAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLF 235 (529)
T ss_dssp CCBHHHHHHTSCC-----CSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCTTCEEEESSCTT
T ss_pred ccchhhhhccCCC-----cccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCCCcEEEEeecHH
Confidence 2246665542221 11223456799999999999999999999999998 56666655667889999999999999
Q ss_pred hhchhH-HHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChh
Q 007715 408 WVMGPV-ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (592)
Q Consensus 408 ~~~~~~-~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~ 486 (592)
|+.+++ .++.+|..|+++++.+..+++..+++.|+++++|++.++|+++..|++..........+||.+++|||+++++
T Consensus 236 ~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gGe~l~~~ 315 (529)
T 2v7b_A 236 FAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPARADVAIRICTSAGEALPRE 315 (529)
T ss_dssp SHHHHHHHTHHHHHHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCCGGGCCCCEEEECSSCCCHH
T ss_pred HHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcccccccCCceEEEEEcCCCCCHH
Confidence 999985 4678999999999986567889999999999999999999999999876533332124899999999999999
Q ss_pred hHHHHHHhccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecc
Q 007715 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPL 561 (592)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~g 561 (592)
+.+++.+.+ +++++|.||+||++..++.... .....+++|+|++|++++|+|++|+++|+|++ |||+| +.|
T Consensus 316 ~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~--GEl~v~g~~~~~g 391 (529)
T 2v7b_A 316 IGERFTAHF-GCEILDGIGSTEMLHIFLSNRA-GAVEYGTTGRPVPGYEIELRDEAGHAVPDGEV--GDLYIKGPSAAVM 391 (529)
T ss_dssp HHHHHHHHH-SCCEEEEEECTTTSSEEEECCT-TCCCTTSCCEECTTCEEEEECTTSCBCCTTSC--EEEEEECTTCCCC
T ss_pred HHHHHHHHh-CCceeeeEchhhcCceeecccc-CCCccCCcccCCCCCEEEEECCCCCCCCCCCc--cEEEEecCCcccc
Confidence 999988876 4889999999999654433322 22456799999999999999999999999995 99999 789
Q ss_pred cCCCchhhccccccccccccCc
Q 007715 562 YLGASDRLLNADHEEVYFRGMP 583 (592)
Q Consensus 562 Y~~~~~~~~~~~~~~~~f~~~~ 583 (592)
|+++|+.+......+||-+||-
T Consensus 392 Y~~~~~~t~~~f~~~~~~TGDl 413 (529)
T 2v7b_A 392 YWNNREKSRATFLGEWIRSGDK 413 (529)
T ss_dssp BTTCHHHHHHHEETTEEEEEEE
T ss_pred cCCChHHHHHhhhcCCcccCce
Confidence 9999998744433344444443
|
| >1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-54 Score=470.10 Aligned_cols=335 Identities=18% Similarity=0.164 Sum_probs=273.0
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|+++||+|
T Consensus 49 a~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~ 120 (563)
T 1amu_A 49 VSKRPNNVAIVCENE--------QLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPID 120 (563)
T ss_dssp HHHCTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHCCCCeEEEeCCc--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEeC
Confidence 478999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCC--CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
|.++.+++.++++++++++||+++... ..+ .... ..+..+.. . .+. . ...
T Consensus 121 ~~~~~~~l~~il~~~~~~~li~~~~~~---------~~~-~~~~~~~~~~~~~~--~-----------~~~---~-~~~- 172 (563)
T 1amu_A 121 IEYPKERIQYILDDSQARMLLTQKHLV---------HLI-HNIQFNGQVEIFEE--D-----------TIK---I-REG- 172 (563)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGH---------HHH-TTSCCCSEEEECCC--S-----------TTT---T-SCC-
T ss_pred CCCcHHHHHHHHHhcCCCEEEEcCchh---------hhh-hhccccCceeeecc--h-----------hhc---c-ccC-
Confidence 999999999999999999999987532 111 1111 11111110 0 000 0 000
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcC
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (592)
........++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|+.+++.++.+|+.|
T Consensus 173 ----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G 248 (563)
T 1amu_A 173 ----TNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFMALLTG 248 (563)
T ss_dssp ----SCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHHHHHHHTTT
T ss_pred ----ccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHHHHHCC
Confidence 0111234578999999999999999999999999998888877888999999999999999999998899999999
Q ss_pred CEEEEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 423 ATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 423 ~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
+++++.+.. .++..+++.|+++++|++.++|+++..|... .+++||.+++|||++++++.+++... +++
T Consensus 249 ~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------~~~~lr~~~~gG~~l~~~~~~~~~~~---~~~ 319 (563)
T 1amu_A 249 ASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDPE------RILSIQTLITAGSATSPSLVNKWKEK---VTY 319 (563)
T ss_dssp CEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCTT------TCCSCSEEEEESSCCCHHHHHHHTTT---SEE
T ss_pred CEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc------ccccccEEEEEEecCCHHHHHHHHhC---CeE
Confidence 999998642 4788999999999999999999999877432 36899999999999999999888754 689
Q ss_pred eccccchhcccccccCCcC--CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 501 IESCGGTELSSAYIQGSLL--QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~--~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
+|.||+||++++++..... ......++|+|++|++++|+|++|+++|+|+ +|||+| ++||+|+|+.|..
T Consensus 320 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~g~--~GEl~v~g~~v~~GY~~~pe~t~~ 395 (563)
T 1amu_A 320 INAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDENLQLKSVGE--AGELCIGGEGLARGYWKRPELTSQ 395 (563)
T ss_dssp EEEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEEEEEECTTSCBCCTTC--EEEEEEEETTCCCEETTCHHHHHH
T ss_pred EEEECcCHHhHhheeeecccccCCCCCcccceeCCCEEEEECCCcCCCCCCC--cEEEEEechhhChhhCCCchhhhh
Confidence 9999999998654432221 1235578999999999999999999999999 599999 7899999997743
|
| >3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-54 Score=468.39 Aligned_cols=345 Identities=15% Similarity=0.111 Sum_probs=285.0
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|+++||++
T Consensus 14 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~vpl~ 85 (521)
T 3l8c_A 14 AQTQADFPVYDCLGE--------RRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAYIPVD 85 (521)
T ss_dssp HHHSTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHCCCCcceecCCC--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecC
Confidence 478999999999877 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+.++.+++.++++++++++||++++....... . ....+.++...... .
T Consensus 86 ~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~~--------------~----------------~~~~~~~~~~~~~~--~ 133 (521)
T 3l8c_A 86 VHSAPERILAIIEIAKPSLIIAIEEFPLTIEG--------------I----------------SLVSLSEIESAKLA--E 133 (521)
T ss_dssp TTSCHHHHHHHHHHSCCSEEEESSCCCSCCTT--------------S----------------EEEEHHHHHHHHHH--T
T ss_pred ccccHHHHHHHHHhCCCCEEEecCcccccccc--------------C----------------cccchhhhhhcccc--c
Confidence 99999999999999999999998764211000 0 00112221111000 0
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhh--cCCCCCCEEEEecccchhchhHHHHHHHHcC
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (592)
..........+++++||+|||||||.||||+++|+++++...+.... +++.+++++++..+++|+.+.+.++.+++.|
T Consensus 134 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~G 213 (521)
T 3l8c_A 134 MPYERTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSVMYWAPTLALG 213 (521)
T ss_dssp CCCCCSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGHHHHHHHHHTT
T ss_pred CCcccCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHHHHHHHHHhcC
Confidence 00112234567999999999999999999999999998877766554 6788999999999999999998899999999
Q ss_pred CEEEEeCCC--CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 423 ATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 423 ~~lvl~~~~--~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
+++++.+.. .++..+++.|+++++|++.++|+++..+.........++++||.+++|||++++++.+++.+.++++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i 293 (521)
T 3l8c_A 214 GTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQAKMPALTHFYFDGEELTVSTARKLFERFPSAKI 293 (521)
T ss_dssp CEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEE
T ss_pred CEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccccCccceEEEEecccCCHHHHHHHHHHCCCceE
Confidence 999998743 378899999999999999999999999988766566678999999999999999999999999888999
Q ss_pred eccccchhcccccccCCcC----CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 501 IESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
+|.||+||+++.++..... .....+++|+|++|++++|+|++|+++|+|++ |||+| +.||+|+|+.+..
T Consensus 294 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~g~~~~~g~~--GEl~v~g~~v~~GY~~~~~~t~~ 371 (521)
T 3l8c_A 294 INAYGPTEATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIIDEDGKELSSGEQ--GEIIVTGPAVSKGYLNNPEKTAE 371 (521)
T ss_dssp EEEECCGGGSSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEECTTSCBCCTTCC--EEEEEESTTSCSCBTTCHHHHHH
T ss_pred EeCcCccHHhhhhceeecccccccCCCccccccccCCCEEEEECCCcCCCCCCCc--eEEEecccccChhhcCCchHhhc
Confidence 9999999998654432221 12245689999999999999999999999995 99999 7899999998744
Q ss_pred c
Q 007715 572 A 572 (592)
Q Consensus 572 ~ 572 (592)
.
T Consensus 372 ~ 372 (521)
T 3l8c_A 372 A 372 (521)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-55 Score=469.08 Aligned_cols=355 Identities=14% Similarity=0.118 Sum_probs=274.9
Q ss_pred CCCCCCceEEEEeccC-CCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEec
Q 007715 186 RRKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~-~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpl 263 (592)
++++||++|+++.+.. ...+..+++||+||+++++++|++|+++ + +||+|+|+++|++++++++|||+++|+++|||
T Consensus 34 a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl 112 (480)
T 3t5a_A 34 ARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAFLGALQAGRIAVPL 112 (480)
T ss_dssp HHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHHHHHHHhCcEEEee
Confidence 4789999999987621 1123346999999999999999999999 8 99999999999999999999999999999999
Q ss_pred CC---CCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhcc
Q 007715 264 AD---SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (592)
Q Consensus 264 d~---~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (592)
++ .++.+++.++++++++++||+++... +.........+. ...++. ++.+...
T Consensus 113 ~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 170 (480)
T 3t5a_A 113 SVPQGGVTDERSDSVLSDSSPVAILTTSSAV------DDVVQHVARRPGESPPSIIE----------------VDLLDLD 170 (480)
T ss_dssp CSCCSCTTCCHHHHHHHHHCCSEEEECTTTH------HHHHHTCC------CCEEEE----------------GGGSCTT
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEeChhHH------HHHHHHHhccccccccceeE----------------ecccccc
Confidence 99 88899999999999999999998532 111111111110 001110 1111000
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCC------CCEEEEecccchhchh
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV------GDVYCWPTNLGWVMGP 412 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~------~d~~l~~~~~~~~~~~ 412 (592)
. ..........++++|||+|||||||+||||+++|+++++.+.+....+.+.+ +|++++.+|++|+.++
T Consensus 171 ~-----~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 245 (480)
T 3t5a_A 171 A-----PNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYHDMGL 245 (480)
T ss_dssp C-----C---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEEEEECCCTTSTTHH
T ss_pred c-----ccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCCCeEEEeCCCcCccHH
Confidence 0 0111223456789999999999999999999999999988888777777777 8999999999999996
Q ss_pred -HHHHHHHHcCCEEEEeCCC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhc----CcCCCCCCccccEEEEecCCCC
Q 007715 413 -VILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNT----NCLEGLDWTKIRSFASTGETSN 484 (592)
Q Consensus 413 -~~~~~~L~~G~~lvl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~----~~~~~~~l~sLr~v~~gGe~l~ 484 (592)
+.++.+|+.|+++++.+.. .++..+++.|+++++| +..+|+++..++.. ......++++||.+++|||+++
T Consensus 246 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~~l~~lr~i~~gG~~l~ 324 (480)
T 3t5a_A 246 VIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGRDLGNILTILSGSERVQ 324 (480)
T ss_dssp HHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTCCCTTCCEEEECCTTCC
T ss_pred HHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcccccccchhhhheeeecCCcCC
Confidence 5789999999999998632 3788999999999999 88999998888763 2334567899999999999999
Q ss_pred hhhHHHHHHhcc-----CCceeccccchhcccccccCCcCC------------------------CCccCcccccCCCce
Q 007715 485 VDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQ------------------------PQAFGAFSTATMTAG 535 (592)
Q Consensus 485 ~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~------------------------~~~~~~iG~p~~~~~ 535 (592)
+++.+++.+.++ +++++|.||+||+++.++...... ....+++|+|++ ++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~-~~ 403 (480)
T 3t5a_A 325 AATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRS-PI 403 (480)
T ss_dssp HHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSS-SE
T ss_pred HHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccC-CE
Confidence 999999988873 457999999999987655433211 123468999999 99
Q ss_pred EEEECCC-CCCCCCCCCcceeEEE-----ecccCCCchhhccc
Q 007715 536 LVILDEC-GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNA 572 (592)
Q Consensus 536 v~IlD~~-g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~ 572 (592)
++|+|++ |++||+|++ |||+| ++||+|+|+.|.+.
T Consensus 404 ~~ivd~~~g~~~~~g~~--GEl~v~g~~v~~GY~~~pe~t~~~ 444 (480)
T 3t5a_A 404 VRIVDSDTCIECPDGTV--GEIWVHGDNVANGYWQKPDESERT 444 (480)
T ss_dssp EEEEETTTTEECCTTBC--EEEEEESTTSCCCBTTBHHHHHHH
T ss_pred EEEEcCCCCcCCCCCCE--EEEEEeCCccccccccCcchhHHH
Confidence 9999966 899999995 99999 89999999987443
|
| >1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-53 Score=460.71 Aligned_cols=359 Identities=16% Similarity=0.103 Sum_probs=282.3
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+.+ +++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||+|
T Consensus 12 a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 85 (504)
T 1t5h_X 12 ATRAPDHCALAVPARG------LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLN 85 (504)
T ss_dssp HHHCTTSEEEEETTTT------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHhCCCceEEEEcCCC------ceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Confidence 3789999999986211 3899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEE--ecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFT--QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
|.++.+++.+++++++++++|+ ++.. ...+........ ++ .++++.......
T Consensus 86 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~-~~----------------~~~~~~~~~~~~ 139 (504)
T 1t5h_X 86 PRLKSAELAELIKRGEMTAAVIAVGRQV---------ADAIFQSGSGAR-II----------------FLGDLVRDGEPY 139 (504)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEECC--CH---------HHHHHHHCCCCE-EE----------------EGGGTEETTEEC
T ss_pred CccChHHHHHHHhhcCCcEEEEecchhh---------hhhhhhccccce-eE----------------EecchhhcCccc
Confidence 9999999999999999999999 5532 111101111111 11 122222211000
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCC--CCCCEEEEecccchhchh-HHHHHHH
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL--KVGDVYCWPTNLGWVMGP-VILFSSF 419 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (592)
............++++|||+|||||||+||||+++|+++.+.+.+....+++ .++|++++..|++|+.++ +.++.+|
T Consensus 140 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l 219 (504)
T 1t5h_X 140 SYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAAL 219 (504)
T ss_dssp CCSCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTTHHHHH
T ss_pred ccCCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHHHHHHH
Confidence 0000111123457899999999999999999999999999888877777777 889999999999999998 5688999
Q ss_pred HcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcC-c-CCCCCCccccEEEEecCCCChhhHHHHHHhccC
Q 007715 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN-C-LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (592)
Q Consensus 420 ~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~-~-~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~ 497 (592)
+.|+++++.+ .+++..+++.|+++++|+++++|+++..|.+.. . ....++++||.+++|||++++++.+++.+.++
T Consensus 220 ~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~- 297 (504)
T 1t5h_X 220 ALDGTYVVVE-EFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLP- 297 (504)
T ss_dssp HTTCEEEECS-SCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHHHCC-
T ss_pred HcCceEEeCC-CCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHHhcC-
Confidence 9999999987 478899999999999999999999999998764 2 23456899999999999999999999988875
Q ss_pred CceeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCC---CCCCCCCCcceeEEEe------cccCCCchh
Q 007715 498 NAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECG---VPYPDDQPCVGEVGLF------PLYLGASDR 568 (592)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g---~~vp~G~~giGel~v~------~gY~~~~~~ 568 (592)
++++|.||+||+++. .. .. ....+++|+|+++++++|+|+++ +++|+|+. |||+|. +||+|+|+.
T Consensus 298 ~~~~~~YG~TE~~~~-~~-~~--~~~~~~~g~p~~~~~~~i~~~~~~~~~~~~~g~~--GEl~v~gg~~~~~GY~~~~~~ 371 (504)
T 1t5h_X 298 GEKVNIYGTTEAMNS-LY-MR--QPKTGTEMAPGFFSEVRIVRIGGGVDEIVANGEE--GELIVAASDSAFVGYLNQPQA 371 (504)
T ss_dssp SEEEEEEEETTTEEE-EE-EE--SCSSSSEEBCCTTCCEEEECTTSCTTCBCCTTCC--EEEEEECCTTSCCCBTTCHHH
T ss_pred cceeeeecccccccc-cc-cc--CCCCCccccCCCCCceeEEeccCCCCCcCCCCCc--ceEEEeCCceeeceecCCchh
Confidence 789999999999432 22 11 34567899999999999999888 99999995 999994 799999998
Q ss_pred hccccccccccccCcC
Q 007715 569 LLNADHEEVYFRGMPM 584 (592)
Q Consensus 569 ~~~~~~~~~~f~~~~~ 584 (592)
+......+||-+||-+
T Consensus 372 t~~~f~~g~~~TGDlg 387 (504)
T 1t5h_X 372 TAEKLQDGWYRTSDVA 387 (504)
T ss_dssp HHHHEETTEEEEEEEE
T ss_pred hhhhhcCCccccCcEE
Confidence 7544433344444443
|
| >3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-52 Score=463.95 Aligned_cols=351 Identities=14% Similarity=0.118 Sum_probs=280.1
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++||++|+++.+. +..+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|+++||++
T Consensus 21 a~~~p~~~a~~~~~~----~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 96 (590)
T 3kxw_A 21 ALHSPNKKSCTFLNK----ELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLYAGCIAVPIY 96 (590)
T ss_dssp HHHCTTSEEEEEEET----TEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHhCCCCeEEEEEcC----CeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCcEEEEec
Confidence 478999999998642 1234999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC---HHHHHHHHHhcCeeEEEEecceeccCccccchhhHh-hcCCC--cEEEEcCCCCCCCCCCccCcccHHHhhcc
Q 007715 265 DSFA---AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL-GAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (592)
Q Consensus 265 ~~~~---~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (592)
|.++ .+++.++++++++++++++...... ..... ...+. ...++. .+.+...
T Consensus 97 ~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~------~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 154 (590)
T 3kxw_A 97 PPAQEKLLDKAQRIVTNSKPVIVLMIADHIKK------FTADELNTNPKFLKIPAIA----------------LESIELN 154 (590)
T ss_dssp CCCSHHHHHHHHHHHHHHCCSEEEECHHHHHH------HCC-----CCEETTEEEEE----------------GGGCCGG
T ss_pred CCCchHHHHHHHHHHHhCCCCEEEeCHHHHHH------HHHhhhhhcccccccceee----------------chhcccc
Confidence 9884 5789999999999999998753210 00000 00000 011111 1111100
Q ss_pred CCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHH-HHH
Q 007715 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFS 417 (592)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~ 417 (592)
.. .........++++|||+|||||||+||||+++|+++++.+.+....++++++|++++.+|++|+.+++. ++.
T Consensus 155 ~~-----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~ 229 (590)
T 3kxw_A 155 RS-----SSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDMGLIGCILT 229 (590)
T ss_dssp GG-----GGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHTTTHH
T ss_pred cc-----ccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCCcCeEEEecCCCcchhhHHHHHH
Confidence 00 011223456799999999999999999999999999999988888899999999999999999999866 889
Q ss_pred HHHcCCEEEEeCCCC---ChhhHHHHHHHhCCcEEEccHHHHHHHHhc---CcCCCCCCccccEEEEecCCCChhhHHHH
Q 007715 418 SFLNGATLALYQGSP---LERSFGKFVQDAGVTVLGTVPSLVKAWRNT---NCLEGLDWTKIRSFASTGETSNVDDDLWL 491 (592)
Q Consensus 418 ~L~~G~~lvl~~~~~---~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~---~~~~~~~l~sLr~v~~gGe~l~~~~~~~~ 491 (592)
+++.|+++++.+... ++..+++.|+++++|++.++|+++..+.+. ......++++||.+++|||++++++.+++
T Consensus 230 ~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~ 309 (590)
T 3kxw_A 230 PIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEPVREETMEHF 309 (590)
T ss_dssp HHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSCCCHHHHHHH
T ss_pred HHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCCCCHHHHHHH
Confidence 999999999986321 678999999999999999999999998875 22345678999999999999999999998
Q ss_pred HHhcc-----CCceeccccchhcccccccCCcC--------------------------CCCccCcccccCCCceEEEEC
Q 007715 492 SSKAW-----YNAIIESCGGTELSSAYIQGSLL--------------------------QPQAFGAFSTATMTAGLVILD 540 (592)
Q Consensus 492 ~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~--------------------------~~~~~~~iG~p~~~~~v~IlD 540 (592)
.+.++ +.+++|.||+||+++.++..... .....+++|+|+++ ++|+|
T Consensus 310 ~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d 387 (590)
T 3kxw_A 310 YQAFKEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIID 387 (590)
T ss_dssp HHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEEC
T ss_pred HHHHHHcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEc
Confidence 88764 34799999999998755432210 11234689999998 89999
Q ss_pred CC-CCCCCCCCCcceeEEE-----ecccCCCchhhcc
Q 007715 541 EC-GVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (592)
Q Consensus 541 ~~-g~~vp~G~~giGel~v-----~~gY~~~~~~~~~ 571 (592)
++ ++++|+|++ |||+| ++||+|+|+.+..
T Consensus 388 ~~~~~~~~~g~~--GEl~v~g~~v~~GY~~~p~~t~~ 422 (590)
T 3kxw_A 388 PDTLIPCDFDQV--GEIWVQSNSVAKGYWNQPEETRH 422 (590)
T ss_dssp TTTCCBCCTTBC--EEEEEESTTSCCCBTTCHHHHHH
T ss_pred CCCCcCCCCCCE--EEEEEeCCcccccccCChhHHHH
Confidence 76 999999995 99999 8999999998743
|
| >3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-52 Score=452.20 Aligned_cols=344 Identities=19% Similarity=0.176 Sum_probs=271.5
Q ss_pred CCCCCC-ceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDN-TVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd-~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
++++|+ ++|+++.++ ++||+||+++++++|++|. .|++|+|+++|++++++++|||+|+|+++||||
T Consensus 32 a~~~p~d~~Al~~~~~--------~~Ty~eL~~~~~~~A~~L~----~~~~V~i~~~~~~~~~~~~la~~~~Ga~~vpl~ 99 (505)
T 3nyq_A 32 PTGAPADRPALRFGER--------SLTYAELAAAAGATAGRIG----GAGRVAVWATPAMETGVAVVAALLAGVAAVPLN 99 (505)
T ss_dssp CCSGGGGSEEEEETTE--------EEEHHHHHHHHHHHHTTCC-------CEEEECCSSHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHhCCCCCeEEEECCe--------eeeHHHHHHHHHHHHhhcc----CCCEEEEEcCCCHHHHHHHHHHHHhCCEEEEcC
Confidence 467776 999999877 9999999999999998774 489999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
|.+|.+++.++++++++++||++.... .. .. .. ....+.+.. ..
T Consensus 100 ~~~~~~~l~~il~~~~~~~vi~~~~~~-----~~--~~-~~--~~~~~~~~~---------------------~~----- 143 (505)
T 3nyq_A 100 PKSGDKELAHILSDSAPSLVLAPPDAE-----LP--PA-LG--ALERVDVDV---------------------RA----- 143 (505)
T ss_dssp TTCCHHHHHHHHHHHCCSEEEECTTCC-----CC--GG-GT--TSEEEECCT---------------------TC-----
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCccc-----cc--hh-hc--ccccccccc---------------------cc-----
Confidence 999999999999999999999987521 00 00 00 000111100 00
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCC
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGA 423 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~ 423 (592)
....+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++|++++..|++|..+. +.++.+|+.|+
T Consensus 144 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 223 (505)
T 3nyq_A 144 RGAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGG 223 (505)
T ss_dssp CCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTC
T ss_pred ccCCCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCC
Confidence 00111233467899999999999999999999999999999888888899999999999999998876 56899999999
Q ss_pred EEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcC---CCCCCccccEEEEecCCCChhhHHHHHHhccCCce
Q 007715 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL---EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (592)
Q Consensus 424 ~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~---~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (592)
++++.+ .+++..+++.+ ++++|+++++|+++..|.+.... ....++++|.+++|||++++++.+++...+ ++++
T Consensus 224 ~~~~~~-~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~-~~~~ 300 (505)
T 3nyq_A 224 SVRHLG-RFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAAT-GRRV 300 (505)
T ss_dssp EEEECS-SCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHHHHHHHHHCSEEEECSSCCCHHHHHHHHHHH-SCCC
T ss_pred EEEECC-CCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCchhhcccccceEEEECCCCCCHHHHHHHHHhc-CCee
Confidence 999986 57888899988 89999999999999999874221 123467899999999999999999888775 4799
Q ss_pred eccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCC---CCCcceeEEE-----ecccCCCchhhccc
Q 007715 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPD---DQPCVGEVGL-----FPLYLGASDRLLNA 572 (592)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~---G~~giGel~v-----~~gY~~~~~~~~~~ 572 (592)
+|.||+||+++.++. ........+++|+|++|++++|+|++|++++. |+ +|||+| ++||+|+|+.+...
T Consensus 301 ~~~YG~TE~~~~~~~-~~~~~~~~~~vG~p~~~~~~~i~d~~g~~~~~~~~g~--~GEl~v~g~~v~~GY~~~~~~t~~~ 377 (505)
T 3nyq_A 301 IERYGMTETLMNTSV-RADGEPRAGTVGVPLPGVELRLVEEDGTPIAALDGES--VGEIQVRGPNLFTEYLNRPDATAAA 377 (505)
T ss_dssp EEEEEETTTEEEEEC-CTTSCCCTTCCCEECTTCEEEEC-----CCCCCCSCC--CEEEEEESTTSCCEETTCHHHHHHT
T ss_pred ecccchhhccccccc-CCCCCCCCCCcccCCCCCEEEEECCCCCCcccCCCCc--eEEEEEecCchhhhhCCChhHhhhh
Confidence 999999999865433 33334556899999999999999999999987 77 599999 89999999988555
Q ss_pred ccccccc-ccCc
Q 007715 573 DHEEVYF-RGMP 583 (592)
Q Consensus 573 ~~~~~~f-~~~~ 583 (592)
...+.|| +||-
T Consensus 378 f~~~g~y~TGDl 389 (505)
T 3nyq_A 378 FTEDGFFRTGDM 389 (505)
T ss_dssp BCTTSCEEEEEE
T ss_pred hcCCCCCccCCe
Confidence 5434444 4443
|
| >3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-52 Score=455.48 Aligned_cols=350 Identities=20% Similarity=0.184 Sum_probs=273.6
Q ss_pred CCCCCCceEEEEecc--CCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEe
Q 007715 186 RRKEDNTVAIVWRED--RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (592)
Q Consensus 186 a~~~pd~~Al~~~~~--~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vp 262 (592)
|+++||++|+++.+. +......+++||+||+++++++|++|++. + +||+|+|+++|++++++++|||+|+|+++||
T Consensus 30 a~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~~~~lA~~~~Gav~vp 108 (562)
T 3ite_A 30 AKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAFAIIVGIMKSGNTYVP 108 (562)
T ss_dssp HHHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHHHHHHHHHHhCCEEEe
Confidence 478999999998652 11112335899999999999999999999 9 7999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCC
Q 007715 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (592)
Q Consensus 263 ld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (592)
+|+.++.+++.+++++++++++|+++...... .......++.. ....+.+.......
T Consensus 109 l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~-----------~~~~~~~~~~~-----------~~~~~~~~~~~~~~- 165 (562)
T 3ite_A 109 IEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGV-----------ELPPETKVLDT-----------KNQSFIENLSTQDT- 165 (562)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEECTTTTTTC-----------CCCTTCEEEET-----------TCHHHHHHHHHSCC-
T ss_pred cCCcCHHHHHHHHHHhcCCCEEEEcccccccc-----------ccCccceeecc-----------cchhhhhhcccccc-
Confidence 99999999999999999999999987532110 00111111111 11122232222211
Q ss_pred CCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhh--------hcCCCCCCEEEEecccchhchhHH
Q 007715 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA--------HIDLKVGDVYCWPTNLGWVMGPVI 414 (592)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~--------~~~~~~~d~~l~~~~~~~~~~~~~ 414 (592)
........++++|||+|||||||+||||+++|+++.+...+... .+.+...+++++..+++|+.+++.
T Consensus 166 ----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (562)
T 3ite_A 166 ----SDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGE 241 (562)
T ss_dssp ----SCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHH
T ss_pred ----cccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHHH
Confidence 11122345688999999999999999999999999876654432 245788899999999999999999
Q ss_pred HHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHh
Q 007715 415 LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (592)
Q Consensus 415 ~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 494 (592)
++.++..|+++++.+....+..+.+.|+++++|++.++|++++.+... ..++++||.+++|||++++++.+++...
T Consensus 242 ~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~----~~~~~~lr~~~~gG~~l~~~~~~~~~~~ 317 (562)
T 3ite_A 242 MFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLV----PEDAPHLVYLGVGGEKMTPRTQQIWSSS 317 (562)
T ss_dssp HHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCC----GGGSTTCCEEEEESSCCCHHHHHHHTTC
T ss_pred HHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccC----ccccCceEEEEEecCCCCHHHHHHHhhC
Confidence 999999999999876333456788999999999999999999887433 3457899999999999999999888765
Q ss_pred ccCCceeccccchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchh
Q 007715 495 AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDR 568 (592)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~ 568 (592)
+ +++++|.||+||+++.++...........++|+|++|++++|+| +.++++|+|++ |||+| ++||+|+|+.
T Consensus 318 ~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~--GEl~v~g~~v~~GY~~~p~~ 394 (562)
T 3ite_A 318 D-RVALVNVYGPTEVTIGCSAGRILPDSDTRCIGHPLGDSVAHVLAPGSNEHVKKGMA--GELVIEGSLVANGYLNRPDA 394 (562)
T ss_dssp S-SCEEEEEECCGGGCSCSEEEECCTTSCTTEEEEECTTCEEEEECTTSSCBCCTTSC--EEEEEESTTSCCEESSCTTC
T ss_pred C-CcEEEEeeccchheeeeeeeeecCCCCCccccccCCCCeEEEEeCCCCCCCCCCCc--eEEEEeccccchhhCCCccc
Confidence 4 58999999999998655544433445567899999999999999 46889999995 99999 7899999997
Q ss_pred hc
Q 007715 569 LL 570 (592)
Q Consensus 569 ~~ 570 (592)
+.
T Consensus 395 t~ 396 (562)
T 3ite_A 395 KG 396 (562)
T ss_dssp CS
T ss_pred cc
Confidence 63
|
| >3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=445.98 Aligned_cols=367 Identities=16% Similarity=0.169 Sum_probs=278.1
Q ss_pred cCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
+++++||++|+++.++ ++||+||+++++++|++|++. +||+|+|+++|++++++++|||+++|+++||++
T Consensus 10 ~a~~~pd~~Al~~~~~--------~~Ty~eL~~~~~~lA~~L~~~--~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~ 79 (501)
T 3ipl_A 10 QAQQNGHHIAITDGQE--------SYTYQNLYCEASLLAKRLKAY--QQSRVGLYIDNSIQSIILIHACWLANIEIAMIN 79 (501)
T ss_dssp HHHHHTTSEEEECSSC--------EEEHHHHHHHHHHHHHHHHTT--CCSEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHhcCCceEEEeCCc--------EEEHHHHHHHHHHHHHHHHHc--CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecC
Confidence 3478999999998876 999999999999999999986 999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
+.++.+++.++++++++++||++...............+ .........................+.......
T Consensus 80 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 151 (501)
T 3ipl_A 80 TRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDI----EFAGRDITTNGLLDNTMGIQYDTSNETVVPKES---- 151 (501)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEETTC------------------------------------CC----
T ss_pred ccCCHHHHHHHHHhcCCCEEEEccccccccccccccccc----eeeeeecccccccccccccccccchhhccccCC----
Confidence 999999999999999999999998653221111000000 000000000000000000000000001100000
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCE
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (592)
..........++++|||+|||||||.||||+++|+++.+.+.+....++++++|++++..|++|+.++..++.+++.|++
T Consensus 152 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~ 231 (501)
T 3ipl_A 152 PSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFT 231 (501)
T ss_dssp HHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCE
T ss_pred cccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCce
Confidence 00011224567999999999999999999999999999988888888999999999999999999999888999999999
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 425 lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
+++.+ .+++..+++.|+++++|++.++|+++..|.+...... .+||.+++|||++++++.+++.+. +++++|.|
T Consensus 232 ~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---~~lr~i~~gG~~l~~~~~~~~~~~--~~~~~~~Y 305 (501)
T 3ipl_A 232 VRIVD-KFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEP---YNLQKILLGGAKLSATMIETALQY--NLPIYNSF 305 (501)
T ss_dssp EEECS-SCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSC---TTCCEEEECSSCCCHHHHHHHHHT--TCCEEEEE
T ss_pred EEeCC-CCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCc---CcccEEEEeCCCCCHHHHHHHHHh--CCCEeccc
Confidence 99987 5789999999999999999999999999998754332 389999999999999999888763 58899999
Q ss_pred cchhcccccccCCcC-CCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccccc
Q 007715 505 GGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (592)
Q Consensus 505 G~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~~~ 578 (592)
|+||+++.++..... ......++|+|++|++++|+|++ +|+ +|||+| ++||+++|+.+.. +.+.|
T Consensus 306 G~TE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~-----~~~--~GEl~v~g~~~~~gY~~~~~~t~~--~~~g~ 376 (501)
T 3ipl_A 306 GMTETCSQFLTATPEMLHARPDTVGMPSANVDVKIKNPN-----KEG--HGELMIKGANVMNGYLYPTDLTGT--FENGY 376 (501)
T ss_dssp EEGGGTEEEEEECHHHHHHCTTCCBEECTTCEEEEESCC-----SSC--CEEEEEESTTSCSCCSBSTTCCCS--EETTE
T ss_pred cccccccceeecCccccccCCCCCCCCCCCcEEEEecCC-----CCC--ccEEEEeccchhhhhCcChhhcch--hcCCc
Confidence 999998644433221 12356789999999999999976 455 499999 8999999997733 33344
Q ss_pred c-ccCcC
Q 007715 579 F-RGMPM 584 (592)
Q Consensus 579 f-~~~~~ 584 (592)
| +||-+
T Consensus 377 ~~TGDl~ 383 (501)
T 3ipl_A 377 FNTGDIA 383 (501)
T ss_dssp EEEEEEE
T ss_pred eecCCEE
Confidence 4 44433
|
| >3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=277.27 Aligned_cols=196 Identities=13% Similarity=0.043 Sum_probs=162.0
Q ss_pred CCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHh---hhhcCCCCCCEEEEeccc-chhchhHHHHHHHHcCCEEEEe
Q 007715 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNL-GWVMGPVILFSSFLNGATLALY 428 (592)
Q Consensus 353 ~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~-~~~~~~~~~~~~L~~G~~lvl~ 428 (592)
.+++++++|+|||||||+||||+++|+++.+...+. ...++++++|++++..|+ .|+.+....+.++..|+ +++.
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~-~v~~ 166 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGG-MFFS 166 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTS-CEEC
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCC-EEEC
Confidence 467899999999999999999999999998877743 355678899999999999 88888877788899999 5554
Q ss_pred CCCCChh-----------------------hHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCCh
Q 007715 429 QGSPLER-----------------------SFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNV 485 (592)
Q Consensus 429 ~~~~~~~-----------------------~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~ 485 (592)
. .+++. .+++.|+++++|++.++|+++..|++.......++++||.+++|||++++
T Consensus 167 ~-~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~ 245 (369)
T 3hgu_A 167 I-DIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNL 245 (369)
T ss_dssp C-CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHHHHHHHHHHCSEEEEESSCCCH
T ss_pred c-cCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhhhhccccCCeeEEEECCccCCH
Confidence 3 45555 77779999999999999999999987643223456899999999999999
Q ss_pred hhHHHHH-HhccCCceeccccchhcccccccCCcCCCCccCccccc------CCCceEEEECC-CCCCCCCCCCcceeEE
Q 007715 486 DDDLWLS-SKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTA------TMTAGLVILDE-CGVPYPDDQPCVGEVG 557 (592)
Q Consensus 486 ~~~~~~~-~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p------~~~~~v~IlD~-~g~~vp~G~~giGel~ 557 (592)
++.+++. +.+++++++|.||+||+++++..+ + ..++|+| +++++++|+|+ +|++||+|+ +|||+
T Consensus 246 ~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~----~--~~~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~G~--~GEl~ 317 (369)
T 3hgu_A 246 DEIKFIASEILPDCEFSASYGSTSALGVSRSL----L--ITSESQQVIYDSFSPFITYDVVDSITAQTVEYGE--RGNVI 317 (369)
T ss_dssp HHHHHHHHHTCTTSEEEEEEEEGGGTEEEEEC----C--BCTTCSSCEEECCTTTEEEEEECTTTCSBCCTTC--EEEEE
T ss_pred HHHHHHHHHhCCCcEEEcccCchhhhcceecc----c--cccCCCcccccCCCCCeEEEEECCCCCcCCCCCC--ceEEE
Confidence 9999999 888779999999999988643211 1 1158999 99999999997 999999999 49999
Q ss_pred E
Q 007715 558 L 558 (592)
Q Consensus 558 v 558 (592)
|
T Consensus 318 v 318 (369)
T 3hgu_A 318 V 318 (369)
T ss_dssp E
T ss_pred E
Confidence 9
|
| >4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=266.45 Aligned_cols=186 Identities=17% Similarity=0.099 Sum_probs=159.2
Q ss_pred CCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCCCCh
Q 007715 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLE 434 (592)
Q Consensus 355 ~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~ 434 (592)
.|++|||+|||||||+||||+++|+++++.+.+....++++++|++++.+|++|+++++.++.+++.|+++++.+...+
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~~~~- 114 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEPTAN- 114 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECCCSC-
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCcccc-
Confidence 3789999999999999999999999999999888889999999999999999999999989999999999999875433
Q ss_pred hhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceeccccchhcccccc
Q 007715 435 RSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYI 514 (592)
Q Consensus 435 ~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 514 (592)
+++.|+++++|++.++|+++..|++... ...++++||.+++|||++++++.+++.+. +++++|.||+||++..+.
T Consensus 115 --~~~~i~~~~~t~~~~~P~~l~~ll~~~~-~~~~l~~lr~v~~gG~~l~~~~~~~~~~~--~~~~~~~YG~TEt~~~~~ 189 (358)
T 4gs5_A 115 --PLAGLDHADFDFVAMVPMQLQSILENSA-TSGQVDRLGKVLLGGAPVNHALAMQISDL--AMPVYQSYGMTETVSHVA 189 (358)
T ss_dssp --TTTTCSSCCCSEEEECHHHHHHHHHCTT-TGGGGGGGCSEEECSSCCCHHHHHHHHTC--SSCEEEEEECGGGSSEEE
T ss_pred --HHHHHHHhCCeEEEcChHHHHHhhcccc-ccccCCcceEEEEcccCCCchheeccccc--CceEEeccccccccceee
Confidence 3567889999999999999999988654 34468999999999999999999988764 588999999999986544
Q ss_pred cCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEEe
Q 007715 515 QGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (592)
Q Consensus 515 ~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v~ 559 (592)
. ........+++|.|.||+++.+.+ .||+++.
T Consensus 190 ~-~~~~~~~~g~~~~~~pgv~~~~~~------------~Gel~~~ 221 (358)
T 4gs5_A 190 L-KALNGPEASELYVFLPGIQYGVDE------------RGCLHIS 221 (358)
T ss_dssp E-EECSSTTCCSCEEECTTCEEEECT------------TSEEEEE
T ss_pred c-ccccccccceeeccCCCeEEEecC------------cCceEEe
Confidence 3 333344568899999999888732 2888884
|
| >2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=268.66 Aligned_cols=201 Identities=15% Similarity=0.091 Sum_probs=161.5
Q ss_pred CCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhh---hhcCCCCCCEEEEecccc-hhchhHHHHHHHHcCCEEEE
Q 007715 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLG-WVMGPVILFSSFLNGATLAL 427 (592)
Q Consensus 352 ~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~-~~~~~~~~~~~L~~G~~lvl 427 (592)
...++++++|+|||||||+||||+++|+++.+...+.. ..++++++|++++..+++ |..++..++.++..|+++++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 167 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVP 167 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEEC
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEE
Confidence 34568999999999999999999999999876544332 357889999999999985 56666678899999999988
Q ss_pred eCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCC--CCccccEEEEecCCCChhhHHHHHHhccCCceecccc
Q 007715 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (592)
Q Consensus 428 ~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~--~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (592)
.+ ..++..+++.|+++++|++.++|+++..|++....... .+++||.+++|||++++++.+++.+.+ +++++|.||
T Consensus 168 ~~-~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG 245 (443)
T 2y4o_A 168 MS-GGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEPWTQALRNEVETRV-GIDALDIYG 245 (443)
T ss_dssp CC-SCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHH-TCEEEEEEE
T ss_pred CC-CCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCcCCHHHHHHHHHHh-CcCEEeccC
Confidence 76 35889999999999999999999999999875322222 257999999999999999999998777 488999999
Q ss_pred chhcccc-cccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEEe
Q 007715 506 GTELSSA-YIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLF 559 (592)
Q Consensus 506 ~TE~~~~-~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v~ 559 (592)
+||+++. +...... .....+.|.+++.++|+| ++|+++|+|+. |||+|.
T Consensus 246 ~TE~~g~~~~~~~~~---~~~g~~~~~~~~~~~i~d~~~g~~~~~G~~--Gel~v~ 296 (443)
T 2y4o_A 246 LSEVMGPGVACECVE---TKDGPVIWEDHFYPEIIDPVTGEVLPDGSQ--GELVFT 296 (443)
T ss_dssp ETTTTEEEEEEECTT---TCCSEEECTTTEEEEEECTTTCCBCCTTCC--EEEEEE
T ss_pred chhhcCCeEEeccCC---CCCceEEccCCeEEEEEcCCCCCCCCCCCc--eEEEEe
Confidence 9998532 2221111 111255677899999999 56999999995 999994
|
| >3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=267.46 Aligned_cols=201 Identities=20% Similarity=0.169 Sum_probs=164.2
Q ss_pred CCCC-CCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHh---hhhcCCCCCCEEEEecccchhch-hHHHHHHHHcCCEEE
Q 007715 352 YNPV-DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMG-PVILFSSFLNGATLA 426 (592)
Q Consensus 352 ~~~~-~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~-~~~~~~~L~~G~~lv 426 (592)
..++ ++++||+|||||||.||||+++|+++.+...+. ...++++++|++++..+++|..+ +..++.++..|++++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 160 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTV 160 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEE
Confidence 3455 899999999999999999999999987665544 33458899999999999875544 456788999999999
Q ss_pred EeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCC--CCccccEEEEecCCCChhhHHHHHHhccCCceeccc
Q 007715 427 LYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (592)
Q Consensus 427 l~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~--~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (592)
+.+ ..++..+++.|+++++|++.++|+++..|++....... .+++||.+++|||++++++.+++.+.+ +++++|.|
T Consensus 161 ~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~Y 238 (436)
T 3qov_A 161 PAA-AGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEPHTDEQRRKIERML-NVKAYNSF 238 (436)
T ss_dssp CCC-SCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEE
T ss_pred eCC-CCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCcCCHHHHHHHHHHh-CccEEecC
Confidence 876 45789999999999999999999999999876432222 378999999999999999999998877 48999999
Q ss_pred cchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEEe
Q 007715 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLF 559 (592)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v~ 559 (592)
|+||+++.++.... .....+|.|.+++.++|+| ++|+++|+|+. |||+|.
T Consensus 239 G~TE~~~~~~~~~~---~~~~g~~~~~~~~~v~i~d~~~g~~~~~g~~--Gel~v~ 289 (436)
T 3qov_A 239 GMTEMNGPGVAFEC---QEQNGMHFWEDCYLVEIIDPETGEPVPEGEI--GELVLT 289 (436)
T ss_dssp EEGGGTEEEEEEEC---TTCSSEEECTTTEEEEEECTTTCSBCSTTCC--EEEEEE
T ss_pred cchhhcCCeeEEec---CCCCeeEEccCceEEEEEECCCCCCCCCCCc--eEEEEe
Confidence 99999643222211 1123367788899999999 88999999995 999993
|
| >2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=260.50 Aligned_cols=201 Identities=17% Similarity=0.111 Sum_probs=161.8
Q ss_pred CCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhh---hhcCCCCCCEEEEeccc-chhchhHHHHHHHHcCCEEEE
Q 007715 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNL-GWVMGPVILFSSFLNGATLAL 427 (592)
Q Consensus 352 ~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~-~~~~~~~~~~~~L~~G~~lvl 427 (592)
...++++++|+|||||||+||||+++|+++.+...+.. ..++++++|++++..|+ .|..++..++.++..|+++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 165 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP 165 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEEC
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEe
Confidence 34568999999999999999999999999876554332 35788999999999998 566666678899999999998
Q ss_pred eCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCC--CCccccEEEEecCCCChhhHHHHHHhccCCceecccc
Q 007715 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (592)
Q Consensus 428 ~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~--~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (592)
.+ ..++..+++.|+++++|++.++|+++..|++....... .+++||.+++|||++++++.+++.+.+ +++++|.||
T Consensus 166 ~~-~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG 243 (437)
T 2y27_A 166 FG-GGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRM-GIDAVDIYG 243 (437)
T ss_dssp CC-SCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEEE
T ss_pred CC-CCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCccCCHHHHHHHHHHH-CcCEEecCC
Confidence 76 45889999999999999999999999999875322222 247999999999999999999988776 488999999
Q ss_pred chhcccc-cccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEEe
Q 007715 506 GTELSSA-YIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLF 559 (592)
Q Consensus 506 ~TE~~~~-~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v~ 559 (592)
+||+++. +...... ....++.|.+++.++|+| ++|+++|+|+. |||+|.
T Consensus 244 ~TE~~g~~~~~~~~~---~~~g~~~~~~~~~~~i~d~~~g~~~~~g~~--Gel~v~ 294 (437)
T 2y27_A 244 LSEVMGPGVASECVE---TKDGPTIWEDHFYPEIIDPETGEVLPDGEL--GELVFT 294 (437)
T ss_dssp ETTTTEEEEEECCTT---TCSSCEECTTTEEEEEECTTTCCBCCTTCC--EEEEEE
T ss_pred chhhcCCeeEEecCC---CCCceeEccCceEEEEEcCCCCCCCCCCCc--cEEEEe
Confidence 9998432 2222211 111256678999999999 56999999995 999994
|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
Probab=98.58 E-value=2.4e-10 Score=123.32 Aligned_cols=132 Identities=11% Similarity=0.006 Sum_probs=105.4
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCC----C-
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP----L- 84 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~----~- 84 (592)
-+.+|+|+.++...+|.++|+++++...++ +||++||++ |++.+++.|.. ++.|+||++|++++.+.... .
T Consensus 372 ~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~h~~~p~~~-i~~~l~~~r~~--~~~~lf~~~~~~~~~~~~~~~~~~~~ 448 (520)
T 2jgp_A 372 VNTLAMRNKPQREKTFSEFLQEVKQNALDAYGHQDYPFEE-LVEKLAIARDL--SRNPLFDTVFTFQNSTEEVMTLPECT 448 (520)
T ss_dssp CEEEEEEECCCTTSBHHHHHHHHHHHHHHHHHTCCSCHHH-HHHHTCCCCCT--TSCSSCSEEEEEECCCCSCCCCSSEE
T ss_pred eeeeeEEecCCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHHHhcCCCCC--CCCCcEEEEEEEecCCCccccCCCce
Confidence 367899999999999999999999998877 999999999 99999887774 44566999999998653221 0
Q ss_pred -CcCCCccc--cccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecc
Q 007715 85 -YWFPSLDQ--SKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREA 150 (592)
Q Consensus 85 -~~~~~~~~--~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~ 150 (592)
...+.... ..++||.+.+.+.++++...+ |+. ++|+.++++++.++|.++|+++..+++.+
T Consensus 449 ~~~~~~~~~~~~~~~~L~l~~~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~~~~lL~~l~~~p~~~ 513 (520)
T 2jgp_A 449 LAPFMTDETGQHAKFDLTFSATEEREEMTIGVEYST-----SLFTRETMERFSRHFLTIAASIVQNPHIR 513 (520)
T ss_dssp EEECSSCSSCSBCSSSEEEEEEECSSCEEEEEEEET-----TTCCHHHHHHHHHHHHHHHHHHHHCTTCB
T ss_pred eEEeecCCCCcceeeeeEEEEEECCCeEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 01111122 678899888877788888888 998 99999999999999999999987544433
|
| >1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
Probab=98.11 E-value=8.3e-09 Score=108.50 Aligned_cols=136 Identities=7% Similarity=-0.117 Sum_probs=102.3
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCC--CCCc-
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP--PLYW- 86 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~--~~~~- 86 (592)
-+.+|+++.++...+|.++++++++...++ +||++||++ |++.++..+. . .|+|+++|++++.+... ....
T Consensus 276 ~n~lplr~~~~~~~t~~~~l~~v~~~~~~~~~h~~~~~~~-i~~~l~~~~~--~--~~lf~~~~~~~~~~~~~~~~~~~~ 350 (436)
T 1l5a_A 276 VNSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQ-IEQDQGLNAE--Q--SYFMSPFINILPFESPHFADCQTE 350 (436)
T ss_dssp CEEEEEECCCCTTCBHHHHHHHHHHHHHHHHHTTTSCHHH-HHHHTTCCTT--C--CBCCCSEEEEECCCCCCCTTCEEE
T ss_pred EEEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhcCCCHHH-HHHHhccccc--C--CCccceEEEeeccCccccCCCeeE
Confidence 357899999999999999999999998877 999999999 9999976543 3 35699999998765431 0000
Q ss_pred -CCCccccccccHHHHHH-HhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccce---eeccccccccC
Q 007715 87 -FPSLDQSKLTNLGNALE-IHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVV---FREAPKCILDR 157 (592)
Q Consensus 87 -~~~~~~~~~~dl~~~~~-~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~---~~~~~~~~~~~ 157 (592)
........+ ||.+.+. ..++++...+ |+. ++|+.++++++.++|.++|+++..+ ++.+...++.+
T Consensus 351 ~~~~~~~~~~-~l~l~v~~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~~~~~l~~l~~~~~~p~~~l~~lL~~ 421 (436)
T 1l5a_A 351 LKVLASGSAE-GINFTFRGSPQHELCLDITADL-----ASYPQSHWQSHCERFPRFFEQLLARFQQVEQDVARLLAE 421 (436)
T ss_dssp EEEEEECCCC-SEEEEEEECTTSCEEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHS
T ss_pred EEecCCCCcc-ceEEEEEecCCCcEEEEEEeCh-----hhCCHHHHHHHHHHHHHHHHHHHhccCCCcccHHHHhCC
Confidence 000112233 7777665 3567788888 988 9999999999999999999999766 66666555333
|
| >4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} | Back alignment and structure |
|---|
Probab=98.07 E-value=2.4e-08 Score=106.87 Aligned_cols=133 Identities=8% Similarity=-0.076 Sum_probs=92.0
Q ss_pred hHHHhhCCChhH--HHHHHHHHHHhhhccCCC-ChHHHHHHHHHHH---hcCCCCCCchhHHHHHhhhcccccccCCCCC
Q 007715 11 EDLMKVGLKLEE--AEEFDKILKQVISCSKGL-DAREIWRELVARK---VLKPWHPHGLHQLVYYSVYNDWDASIKGPPL 84 (592)
Q Consensus 11 ~~~~~~~~~~~~--~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~---~l~~~r~~~~~~~plfq~~~~~~~~~~~~~~ 84 (592)
.+++|+++.++. ..+|.++|+++++...++ +| ++||++ |++ .|+..|.... .|+||++|++++.......
T Consensus 297 ~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~~~h-~~p~~~-i~~~~~~l~~~~~~~~--~~lf~~~~~~~~~~~~~~~ 372 (493)
T 4hvm_A 297 TDRVVFGVDLTGLREPSFRDLMSRTQAGFLDAVVH-YLPYHD-VVDLAVDLGVVTPPRV--AARWDVAVHLCRNAPSSSL 372 (493)
T ss_dssp EEEEEEEEECTTCSSCBHHHHHHHHHHHHHHHHHT-CCCHHH-HHHHHHHTTSCBTTBT--TGGGCEEECC---------
T ss_pred eceeEEEEecCCCcCCCHHHHHHHHHHHHHHHHhh-cCCHHH-HHHHHhhhCcccCCCC--CcceeEEEEEEecCCcccc
Confidence 367899999999 999999999999998887 99 999999 999 8988777444 4669999999976533210
Q ss_pred C------cCCCc----------------------ccccccc---HHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCH
Q 007715 85 Y------WFPSL----------------------DQSKLTN---LGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHP 132 (592)
Q Consensus 85 ~------~~~~~----------------------~~~~~~d---l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~ 132 (592)
. ..+.. ...+++| +.+.+...++++...+ |+. ++| .++++++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~l~v~~~~~~l~~~~~y~~-----~l~-~~~i~~l 446 (493)
T 4hvm_A 373 TRGERTLAELGVSIELFREADLIGGDTRSATDTWDGTDTWDGTTTDLSVGELGEDMVIVLDQRR-----THP-AGGGSAL 446 (493)
T ss_dssp -----------CEEEECSHHHHCC-------CCTTCCCCCCCCCEEEEEEEETTEEEEEEEECC-------------CHH
T ss_pred ccccccccCCCceeeeccccccccccccccccccccccccCCcceEEEEEEeCCeEEEEEEEcc-----ccC-HHHHHHH
Confidence 0 00000 0123566 7877777788898999 998 899 9999999
Q ss_pred HHHHHHHHhhccceeeccccc
Q 007715 133 EAYWEIALKEISVVFREAPKC 153 (592)
Q Consensus 133 ~~~~~~~l~~~~~~~~~~~~~ 153 (592)
.++|.++|+++..+++.+...
T Consensus 447 ~~~~~~~L~~~~~~p~~~l~~ 467 (493)
T 4hvm_A 447 LDGLDAAMAQAVADPSAPLPH 467 (493)
T ss_dssp HHHHHHHHHHHHHCTTSBCCC
T ss_pred HHHHHHHHHHHHhCCCCcccc
Confidence 999999999997666555544
|
| >2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} | Back alignment and structure |
|---|
Probab=96.92 E-value=7.6e-06 Score=86.49 Aligned_cols=127 Identities=12% Similarity=0.092 Sum_probs=89.0
Q ss_pred hHHHhhCCChhHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHhcCCC---CCCchhHHHHHhhhcccccccCCC----C
Q 007715 11 EDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPW---HPHGLHQLVYYSVYNDWDASIKGP----P 83 (592)
Q Consensus 11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~hq~~pf~~~lv~~l~~~---r~~~~~~~plfq~~~~~~~~~~~~----~ 83 (592)
.+++|+++.++...+|.++|+++++...+..||++||+. + +.+... +....... ++++|++++..... .
T Consensus 307 ~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~-~-~~l~~~~~~~~~~~~~~--p~~~f~~~~~~~~~~~~~~ 382 (466)
T 2xhg_A 307 TSQYPVLLDLKQTAPLSDYIKLTKENMRKIPRKGIGYDI-L-KHVTLPENRGSLSFRVQ--PEVTFNYLGQFDADMRTEL 382 (466)
T ss_dssp CEEEEEEEECSCCCSHHHHHHHHHHHHHHSGGGGTHHHH-H-HHTSCGGGSTTCCCCCC--CSEEEEEEEECCTTCSSSS
T ss_pred eeeccEEEecCCCCCHHHHHHHHHHHHHhCccCCcccce-e-eecccccccccccccCC--CeEEEeecCcccccccCCc
Confidence 366899999999999999999999987666999999985 5 555443 22223334 46888887532211 0
Q ss_pred CC--cCCC-------------ccccccccHHHHHHHhCCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccce
Q 007715 84 LY--WFPS-------------LDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVV 146 (592)
Q Consensus 84 ~~--~~~~-------------~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~ 146 (592)
.. ..+. ......++|.+.+...++++...+ |+. ++|++.+|+++.++|.++|+++...
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~~~~~L~~l~~~ 456 (466)
T 2xhg_A 383 FTRSPYSGGNTLGADGKNNLSPESEVYTALNITGLIEGGELVLTFSYSS-----EQYREESIQQLSQSYQKHLLAIIAH 456 (466)
T ss_dssp CEECTTCTTCCSSTTCTTSBCTTSBCCCSEEEEEEEETTEEEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccccCccccCcccccccccccCcceeEEEEEEEECCEEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0010 011236677776666677888888 998 9999999999999999999987633
|
| >1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
Probab=90.43 E-value=0.0094 Score=61.46 Aligned_cols=106 Identities=9% Similarity=-0.132 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhhhccCCC-ChHHHH-----HHHHHHHhcCCCCCCchhHHHHHhhhc-ccccccCCCCC---CcC--CCc
Q 007715 23 AEEFDKILKQVISCSKGL-DAREIW-----RELVARKVLKPWHPHGLHQLVYYSVYN-DWDASIKGPPL---YWF--PSL 90 (592)
Q Consensus 23 ~~~f~~~l~~~~~~~~~~-~hq~~p-----f~~~lv~~l~~~r~~~~~~~plfq~~~-~~~~~~~~~~~---~~~--~~~ 90 (592)
..+|.++++++++...++ +||++| |++ +++.+++. .|+ +++| ++...+..... ... ...
T Consensus 297 ~~~~~~~l~~v~~~~~~~~~~~~~~~~~l~~~~-i~~~~~~~-------~pl-~~~~~n~~~~~~~~~~~~~~~~~~~~~ 367 (422)
T 1q9j_A 297 NTDIVDLASDIVATLRADLANGVIQQSGLHFGT-AFEGTPPG-------LPP-LVFCTDATSFPTMRTPPGLEIEDIKGQ 367 (422)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTHHHHSCCBGGG-GGGCCCSS-------SCC-CEEEECCCCCCSCCCCTTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHhcCeeeecccchHH-HhcccCCC-------CCc-eEEEecCCcCCCCCCCCCceeEeeecc
Confidence 457999999999998877 999996 889 98888642 233 5555 44322211110 000 000
Q ss_pred cc-cccccHHHH-HHHhCCccccccCCCCCcCHHHHHHHHhhCHHHHHHHHHhhccce
Q 007715 91 DQ-SKLTNLGNA-LEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVV 146 (592)
Q Consensus 91 ~~-~~~~dl~~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~ 146 (592)
.. ..++++.+. +...++++...+|+. + .+++++.++|.++|+++..+
T Consensus 368 ~~~~~~~~l~~~~~~~~~~~l~~~~y~~-----~----~~~~~l~~~~~~~L~~l~~~ 416 (422)
T 1q9j_A 368 FYCSISVPLDLYSCAVYAGQLIIEHHGH-----I----AEPGKSLEAIRSLLCTVPSE 416 (422)
T ss_dssp ECCBSSCCCCEEEEEEETTEEEEEEESS-----C----SSHHHHHHHHHHHHHHTTTS
T ss_pred cccCCCCCceEEEEEeeCCeEEEEEecC-----c----cchHHHHHHHHHHHHHhhcC
Confidence 11 345666655 445566666655765 3 88999999999999998633
|
| >2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* | Back alignment and structure |
|---|
Probab=88.52 E-value=3.9 Score=41.89 Aligned_cols=102 Identities=11% Similarity=0.082 Sum_probs=76.9
Q ss_pred CCCCceEEEEeccCCCCC-CceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCCeEEec
Q 007715 188 KEDNTVAIVWREDRCDES-AVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVSI 263 (592)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~-~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~--~~e~v~a~lA~~k~Ga~~vpl 263 (592)
..++.+|.+....|..+. ....+|.+.+...+..+++.+... ++++|++..+++. ....+..+++.+..|+..+++
T Consensus 87 ~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 166 (437)
T 2y27_A 87 VPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPF 166 (437)
T ss_dssp SCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECC
T ss_pred CChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeC
Confidence 345677755444332222 235689999988888888888778 9999999999986 344455678889999999987
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEEecce
Q 007715 264 ADSFAAREIATRLRVSKAKGIFTQDFI 290 (592)
Q Consensus 264 d~~~~~~~l~~~l~~~~~~~iv~~~~~ 290 (592)
+. ...+++...+++.++.++++.+.+
T Consensus 167 ~~-~~~~~~~~~i~~~~~t~l~~~Ps~ 192 (437)
T 2y27_A 167 GG-GQTEKQVQLIQDFRPDIIMVTPSY 192 (437)
T ss_dssp CS-CCHHHHHHHHHHHCCSEEEECHHH
T ss_pred CC-CCHHHHHHHHHHhCCCEEEECHHH
Confidence 65 478899999999999999987754
|
| >2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} | Back alignment and structure |
|---|
Probab=87.74 E-value=4.5 Score=41.49 Aligned_cols=101 Identities=14% Similarity=0.072 Sum_probs=76.2
Q ss_pred CCCceEEEEeccCCCCC-CceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCC--HHHHHHHHHHHHhCCeEEecC
Q 007715 189 EDNTVAIVWREDRCDES-AVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 189 ~pd~~Al~~~~~~~~~~-~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~--~e~v~a~lA~~k~Ga~~vpld 264 (592)
.++.+|.+....|..+. ....+|.+.+...+..+++.+... ++++|++..+++-+ ...+..+++.+..|+..++++
T Consensus 90 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 169 (443)
T 2y4o_A 90 PREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMS 169 (443)
T ss_dssp CGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCC
T ss_pred ChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECC
Confidence 45666655433322222 234689999988888888888778 99999999999863 444566788899999999876
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecce
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFI 290 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~ 290 (592)
. ...+++...+++.++.+++..+.+
T Consensus 170 ~-~~~~~~~~~i~~~~~t~l~~~Ps~ 194 (443)
T 2y4o_A 170 G-GQTEKQVQLIRDFEPKIILVTPSY 194 (443)
T ss_dssp S-CCHHHHHHHHHHHCCSEEEECHHH
T ss_pred C-CCHHHHHHHHHHhCCcEEEECHHH
Confidence 5 478889999999999999987754
|
| >3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* | Back alignment and structure |
|---|
Probab=87.59 E-value=3.8 Score=41.95 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=77.3
Q ss_pred CceEEEEeccCCCCC-CceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCCeEEecCCC
Q 007715 191 NTVAIVWREDRCDES-AVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVSIADS 266 (592)
Q Consensus 191 d~~Al~~~~~~~~~~-~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~--~~e~v~a~lA~~k~Ga~~vpld~~ 266 (592)
+.+|.+....|..+. ....+|.+.+...+..+++.+... +.++|++..+++- ....+..+++.+..|+..++.++
T Consensus 86 ~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~- 164 (436)
T 3qov_A 86 RDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAA- 164 (436)
T ss_dssp HHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCS-
T ss_pred CCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCC-
Confidence 778876554432222 235689999999888888888888 9999999999874 44556677889999999988765
Q ss_pred CCHHHHHHHHHhcCeeEEEEecce
Q 007715 267 FAAREIATRLRVSKAKGIFTQDFI 290 (592)
Q Consensus 267 ~~~~~l~~~l~~~~~~~iv~~~~~ 290 (592)
...+++...+++.++.+++..+.+
T Consensus 165 ~~~~~~~~~i~~~~~t~~~~~P~~ 188 (436)
T 3qov_A 165 GNSKRQIKFISDFKTTALHAIPSY 188 (436)
T ss_dssp CCHHHHHHHHHHHTCCEEECCHHH
T ss_pred CCHHHHHHHHHHHCCCEEEECHHH
Confidence 467888999999999999887754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 592 | ||||
| d1pg4a_ | 643 | e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en | 3e-54 | |
| d1ry2a_ | 640 | e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast | 1e-45 | |
| d1v25a_ | 534 | e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 | 2e-26 | |
| d1lcia_ | 541 | e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali | 1e-22 | |
| d1amua_ | 514 | e.23.1.1 (A:) Phenylalanine activating domain of g | 2e-21 | |
| d1mdba_ | 536 | e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B | 1e-16 | |
| d3cw9a1 | 503 | e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc | 3e-13 |
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Score = 192 bits (490), Expect = 3e-54
Identities = 107/464 (23%), Positives = 186/464 (40%), Gaps = 30/464 (6%)
Query: 126 KFTVEHPEAYWEIALKEISVVFREAPKCILDRT-DKSKHGGTWLPGSVLNIAECCLLPSN 184
K ++ P+ +W K + + + + + + W LN+A CL
Sbjct: 25 KQSINDPDTFWGEQGKILD--WITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCL--DR 80
Query: 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243
H ++ + AI+W D +S ++Y+EL V AN L + KGD +AI MPM
Sbjct: 81 HLQENGDRTAIIWEGDDTSQSKH--ISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMV 138
Query: 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 303
A + LA G V I F+ +A + S ++ + T D +R GR PL V
Sbjct: 139 PEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNV 198
Query: 304 LGAAPLKAIVLPAIGNDVGIPLREQDLSW---KDFLSSVDYHPRPNYYSPVYNPVDAVVN 360
A LK + ++ + + + D+ W +D + P + +
Sbjct: 199 DDA--LKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLF 256
Query: 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMGPV-ILFSS 418
IL++SG+TG+PK + T + A + ++ D GD+Y ++GWV G +L+
Sbjct: 257 ILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGP 316
Query: 419 FLNGATLALYQGSPLERS---FGKFVQDAGVTVLGTVPSLVKAWRNTN--CLEGLDWTKI 473
GAT +++G P + + V V +L T P+ ++A +EG D + +
Sbjct: 317 LACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSL 376
Query: 474 RSFASTGETSNVDDDLWLSSK--AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT 531
R S GE N + W K ++++ TE + ++ L A S
Sbjct: 377 RILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTE-TGGFMITPLPGAIELKAGSATR 435
Query: 532 MTAG--LVILDECGVPYPDDQP---CVGE--VGLFPLYLGASDR 568
G ++D G P + + G G +R
Sbjct: 436 PFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHER 479
|
| >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 168 bits (426), Expect = 1e-45
Identities = 93/482 (19%), Positives = 176/482 (36%), Gaps = 23/482 (4%)
Query: 126 KFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKH----GGTWLPGSVLNIAECCLL 181
K ++E P ++ + + + + + K+ W LN C+
Sbjct: 8 KESIEDPAKFFGSKATQF-LNWSKPFDKVFIPDPKTGRPSFQNNAWFLNGQLNACYNCV- 65
Query: 182 PSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMF--SKGDAIAID 239
H K N AI++ D + +TYKEL E+V VA L KGD +A+
Sbjct: 66 -DRHALKTPNKKAIIFEGDEPGQGYS--ITYKELLEEVCQVAQVLTYSMGVRKGDTVAVY 122
Query: 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 299
MPM A+I LAI G + + F++ + R+ +K + T D RGG+
Sbjct: 123 MPMVPEAIITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIET 182
Query: 300 YSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVV 359
V A V + + +D + + YY + +
Sbjct: 183 KRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLDWATEKKKYKTYYPCTPVDSEDPL 242
Query: 360 NILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMGPV-ILFS 417
+L++SG+TG PK + + + + D DV+ ++GW+ G +++
Sbjct: 243 FLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYG 302
Query: 418 SFLNGATLALYQGSPLERSFGKF---VQDAGVTVLGTVPSLVKAWRNTN--CLEGLDWTK 472
L G +++G+P ++ ++ + + VT P+ ++ + +E
Sbjct: 303 PLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKS 362
Query: 473 IRSFASTGETSNVDDDLWLSSK--AWYNAIIESCGGTELSSAYIQ--GSLLQPQAFGAFS 528
+R S GE + W S K I+++ TE S + + P G+ S
Sbjct: 363 LRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMKPGSAS 422
Query: 529 TATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGM 588
V+LD + G + + + + + +H+ + Y G
Sbjct: 423 FPFFGIDAVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWK-NHDRYLDTYLNPYPGY 481
Query: 589 VH 590
Sbjct: 482 YF 483
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Score = 110 bits (276), Expect = 2e-26
Identities = 75/414 (18%), Positives = 125/414 (30%), Gaps = 43/414 (10%)
Query: 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243
+ TY E+ ++ + L + GD +A
Sbjct: 20 AAALFGRKEVVSRLHTGEVHR----TTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNH 75
Query: 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 303
R + Y A+ G V+ + + +EIA L ++ K + +L
Sbjct: 76 FRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLL------------ 123
Query: 304 LGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILF 363
++AI + + E+ PV P A + +
Sbjct: 124 ---PLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGEEAD----PVRVPERAACGMAY 176
Query: 364 SSGTTGEPKA--IPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421
++GTTG PK L A L DV + V + +++ L
Sbjct: 177 TTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPYAATLV 236
Query: 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481
GA L S + GVT VP++ A + G +R G
Sbjct: 237 GAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGS 296
Query: 482 TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQ---GSLLQPQAFGAFSTATMTAG--- 535
+ + + + G TE S +Q S L+ + T G
Sbjct: 297 AAPRSLIARF--ERMGVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPI 354
Query: 536 ----LVILDECGVPYPDDQPCVGEV-----GLFPLYLGASDRLLNADHEEVYFR 580
L + DE G P P D +GEV + Y G + +A + +FR
Sbjct: 355 PLVRLRVADEEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFR 408
|
| >d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Luciferase species: Firefly (Photinus pyralis) [TaxId: 7054]
Score = 99.6 bits (247), Expect = 1e-22
Identities = 62/421 (14%), Positives = 133/421 (31%), Gaps = 24/421 (5%)
Query: 168 LPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD 227
P E L +R I + + + + +TY E E + +A A+
Sbjct: 12 YPLEDGTAGE--QLHKAMKRYALVPGTIAFTDAHIEVN----ITYAEYFEMSVRLAEAMK 65
Query: 228 TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT 286
+ I + +++ + L + G V D + RE+ + +S+ +F
Sbjct: 66 RYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFV 125
Query: 287 QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346
L+ ++ K I++ + + G ++ +Y P
Sbjct: 126 SKKGLQKILNVQKKLPIIQ----KIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVP- 180
Query: 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQ---LSSIRCTAEGWAHIDLKVGDVYCWP 403
++ + I+ SSG+TG PK + + +
Sbjct: 181 ---ESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSV 237
Query: 404 TNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN 463
G + G + L E F + +QD + VP+L + +
Sbjct: 238 VPFHHGFGMFTTLGYLICGFRVVLMYRFEEEL-FLRSLQDYKIQSALLVPTLFSFFAKST 296
Query: 464 CLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQA 523
++ D + + AS G + + ++ + I + G TE +SA + +
Sbjct: 297 LIDKYDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAIL-ITPEGDDK 355
Query: 524 FGAFSTATMTAGLVILD-ECGVPYPDDQP---CVGEVGLFPLYLGASDRLLNADHEEVYF 579
GA ++D + G +Q CV + Y+ + ++ +
Sbjct: 356 PGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWL 415
Query: 580 R 580
Sbjct: 416 H 416
|
| >d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Phenylalanine activating domain of gramicidin synthetase 1 species: Bacillus brevis [TaxId: 1393]
Score = 95.3 bits (236), Expect = 2e-21
Identities = 64/402 (15%), Positives = 126/402 (31%), Gaps = 51/402 (12%)
Query: 191 NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVII 249
N VAIV ++ +TY EL + +A K + I M ++ I
Sbjct: 38 NNVAIVCENEQ--------LTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIG 89
Query: 250 YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 309
LA++ AG V I + I L S+A+ + TQ ++
Sbjct: 90 ILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVH----------------- 132
Query: 310 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 369
++ I + + + E+D R V + + ++++SGTTG
Sbjct: 133 ---LIHNIQFNGQVEIFEED----------TIKIREGTNLHVPSKSTDLAYVIYTSGTTG 179
Query: 370 EPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429
PK +++ D ++ + +F + L GA+L +
Sbjct: 180 NPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFMALLTGASLYIIL 239
Query: 430 GSPLE--RSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDD 487
+ F +++ +TV+ L+ I++ + G ++
Sbjct: 240 KDTINDFVKFEQYINQKEITVITLP------PTYVVHLDPERILSIQTLITAGSATSPSL 293
Query: 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP 547
K Y T ++ ++ + I+DE
Sbjct: 294 VNKWKEKVTYINAYGPTETTICATTWVATK-ETIGHSVPIGAPIQNTQIYIVDENLQLKS 352
Query: 548 DDQP---CVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYK 586
+ C+G GL Y + + + G +YK
Sbjct: 353 VGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYK 394
|
| >d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Dihydroxybenzoate-AMP ligase DhbE species: Bacillus subtilis [TaxId: 1423]
Score = 80.4 bits (197), Expect = 1e-16
Identities = 52/369 (14%), Positives = 100/369 (27%), Gaps = 30/369 (8%)
Query: 191 NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVII 249
+ +AI +Y+EL + +A + + D + + +P +
Sbjct: 40 DRIAITCGNTH--------WSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEV 91
Query: 250 YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL 309
A+ G + V S + EI ++A D A
Sbjct: 92 IFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSG--------FDYRSLARQ 143
Query: 310 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 369
LP + N + E+ L +D + P + + S G+TG
Sbjct: 144 VQSKLPTLKNIIVAGEAEEFLPLEDLHTEPVKLPEVKSSDVAF--------LQLSGGSTG 195
Query: 370 EPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMG-PVILFSSFLNGATLALY 428
K IP T I L VY + L +
Sbjct: 196 LSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVL 255
Query: 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDD 488
SP ++ VT+ VP L W + D + ++ G + +
Sbjct: 256 SPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAA 315
Query: 489 LWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTA-TMTAGLVILDECGVPYP 547
+ + + + + G E Y + + + + D+
Sbjct: 316 RRVKAV-FGCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRVWDDHDRDVK 374
Query: 548 DDQPCVGEV 556
+ G +
Sbjct: 375 PGET--GHL 381
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Score = 70.1 bits (170), Expect = 3e-13
Identities = 56/348 (16%), Positives = 96/348 (27%), Gaps = 31/348 (8%)
Query: 210 MTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268
+T+ ELR +V VA L +A+ P + VI LA+ G V +
Sbjct: 30 LTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRLK 89
Query: 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQ 328
+ E+A ++ + A + G+ I
Sbjct: 90 SAELAELIKRGEMTAAVIAV------------------GRQVADAIFQSGSGARIIFLGD 131
Query: 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAI--PWTQLSSIRCTA 386
+ + S P I ++SGTTG PKA P S
Sbjct: 132 LVRDGEPYSYGPPIEDPQR------EPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFM 185
Query: 387 EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGV 446
+ +V L V+G + + L + + VQ V
Sbjct: 186 STQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQV 245
Query: 447 TVLGTVPSLVKAWRNTNCLEG--LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504
T L P+ + A G L +R G T + D + + +
Sbjct: 246 TSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGAT--MPDAVLETVHQHLPGEKVNI 303
Query: 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552
GT + + + A + + I + +
Sbjct: 304 YGTTEAMNSLYMRQPKTGTEMAPGFFSEVRIVRIGGGVDEIVANGEEG 351
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 592 | |||
| d1pg4a_ | 643 | Acetyl-CoA synthetase {Salmonella enterica [TaxId: | 100.0 | |
| d1ry2a_ | 640 | Acetyl-CoA synthetase {Baker's yeast (Saccharomyce | 100.0 | |
| d1v25a_ | 534 | Long chain fatty acid-CoA ligase TT0168 {Thermus t | 100.0 | |
| d1lcia_ | 541 | Luciferase {Firefly (Photinus pyralis) [TaxId: 705 | 100.0 | |
| d1mdba_ | 536 | Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil | 100.0 | |
| d1amua_ | 514 | Phenylalanine activating domain of gramicidin synt | 100.0 | |
| d3cw9a1 | 503 | 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId | 100.0 | |
| d1l5aa2 | 250 | VibH {Vibrio cholerae [TaxId: 666]} | 98.15 | |
| d1v25a_ | 534 | Long chain fatty acid-CoA ligase TT0168 {Thermus t | 88.49 | |
| d1lcia_ | 541 | Luciferase {Firefly (Photinus pyralis) [TaxId: 705 | 87.88 | |
| d1pg4a_ | 643 | Acetyl-CoA synthetase {Salmonella enterica [TaxId: | 80.77 | |
| d3cw9a1 | 503 | 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId | 80.21 |
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Probab=100.00 E-value=5.2e-64 Score=555.02 Aligned_cols=455 Identities=24% Similarity=0.370 Sum_probs=364.3
Q ss_pred CCcCHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCC-CCCCCccCCCCcchhhhhhccccccCCCCCCceEE
Q 007715 117 PITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK-SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAI 195 (592)
Q Consensus 117 ~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al 195 (592)
.+.+|+.+++++++++..||..+++. +.|.+++.++++.... .....+||+++.+|+++|++++++ +.+||++|+
T Consensus 16 ~~~~y~~l~~~s~~~~~~fW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~N~~~n~ldrh~--~~~~d~~Al 91 (643)
T d1pg4a_ 16 NPEQYETKYKQSINDPDTFWGEQGKI--LDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHL--QENGDRTAI 91 (643)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHGGG--SCCSBCCSCCEEEECCTTCCEEEESTTCEECHHHHHTGGGH--HHHTTSEEE
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHhh--eeEECCCcccccCccCCCCCCCeeCCCChhhHHHHHHHHHH--HhCCCCEEE
Confidence 34567999999999999999999986 5688888888766432 233568999999999999999986 678999999
Q ss_pred EEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHHH
Q 007715 196 VWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIAT 274 (592)
Q Consensus 196 ~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~ 274 (592)
++.+. +.++.+++||+||.++++++|++|+++ |++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+
T Consensus 92 i~~~~--~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav~v~l~~~~~~~~l~~ 169 (643)
T d1pg4a_ 92 IWEGD--DTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAG 169 (643)
T ss_dssp EEECS--STTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHH
T ss_pred EEEec--CCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHHHHhCeEEEecCCCCCHHHHHH
Confidence 98754 345677999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHhcCeeEEEEecceeccCccccchhhHhhcC-----C--CcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCC
Q 007715 275 RLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-----P--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY 347 (592)
Q Consensus 275 ~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (592)
+++++++++||+++...+..+.......+...+ . ..++++...+..... .......+.+....... .
T Consensus 170 ~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~ 243 (643)
T d1pg4a_ 170 CIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW-QEGRDLWWRDLIEKASP-----E 243 (643)
T ss_dssp HHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC-CBTTEEEHHHHHTTSCS-----C
T ss_pred HHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCccccc-ccccchhhhhhhcccCc-----c
Confidence 999999999999998877666665555443321 1 234444433222111 11122233343332221 2
Q ss_pred CCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHH-HHHhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEE
Q 007715 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC-TAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATL 425 (592)
Q Consensus 348 ~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~l 425 (592)
..+....++|++||+|||||||+||||+++|++++.. .......++++++|++++.+|++|++++ +.++++|++|+++
T Consensus 244 ~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~ 323 (643)
T d1pg4a_ 244 HQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATT 323 (643)
T ss_dssp CCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEE
T ss_pred cCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEE
Confidence 2334567899999999999999999999999997544 4445566789999999999999999987 4578899999999
Q ss_pred EEeCCC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhcc--CC
Q 007715 426 ALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YN 498 (592)
Q Consensus 426 vl~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~--~~ 498 (592)
+++++. +++..++++|++++||++.++|++++.|++... ....++++||.+++|||++++++++++.+.++ ++
T Consensus 324 vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~ 403 (643)
T d1pg4a_ 324 LMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKC 403 (643)
T ss_dssp EEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCS
T ss_pred EEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCc
Confidence 998753 478899999999999999999999999987643 34667999999999999999999999988875 47
Q ss_pred ceeccccchhcccccccCCc-CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-------ecccCCCchhhc
Q 007715 499 AIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-------FPLYLGASDRLL 570 (592)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-------~~gY~~~~~~~~ 570 (592)
+++|.||+||+++.++...+ ..+.+.+++|+|++|++++|+|++|+++++|+ +|||+| ++||+|+++++.
T Consensus 404 ~i~~~yG~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~ivd~~g~~~~~g~--~Gel~v~~~~p~~~~~~~~~~~~~~ 481 (643)
T d1pg4a_ 404 PVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGAT--EGNLVITDSWPGQARTLFGDHERFE 481 (643)
T ss_dssp CEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEECTTCCBCCSSE--EEEEEECSCCTTCCCEETTCHHHHH
T ss_pred eEEEeechhhccceEEecCCCccCCCCCccccccCCCEEEEECCCCCCCCCCc--eEEEEEecCCCcccccccCChhhch
Confidence 89999999999865554333 23456789999999999999999999999999 599999 368999988663
Q ss_pred cc---cccccccccCcCC
Q 007715 571 NA---DHEEVYFRGMPMY 585 (592)
Q Consensus 571 ~~---~~~~~~f~~~~~~ 585 (592)
.. ...++|++||-++
T Consensus 482 ~~~~~~~~g~~~TGDl~~ 499 (643)
T d1pg4a_ 482 QTYFSTFKNMYFSGDGAR 499 (643)
T ss_dssp HHHHSSSTTSEEEEEEEE
T ss_pred hhhcccCCCeEEcCCEEE
Confidence 32 2245555555544
|
| >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.1e-60 Score=523.13 Aligned_cols=456 Identities=22% Similarity=0.323 Sum_probs=353.4
Q ss_pred CHHHHHHHHhhCHHHHHHHHHhhccceeeccccccccCCCC----CCCCCccCCCCcchhhhhhccccccCCCCCCceEE
Q 007715 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK----SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAI 195 (592)
Q Consensus 120 ~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al 195 (592)
+|+.+++++++++.+||.+++... +.|.+++.+++..... ..+...||+++.+|++++|+++++ +++||++|+
T Consensus 2 ~y~~l~~~Si~~~~~Fw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~lN~~~n~ldr~a--~~~pd~~Al 78 (640)
T d1ry2a_ 2 DYQRLHKESIEDPAKFFGSKATQF-LNWSKPFDKVFIPDPKTGRPSFQNNAWFLNGQLNACYNCVDRHA--LKTPNKKAI 78 (640)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHH-CCEEECCSCSBCBCSSSCSBCSTTCCBSTTCEECHHHHHTHHHH--TTCTTSEEE
T ss_pred CHHHHHHHHHhCHHHHHHHHHHhh-eeEecCCeEeeccCCccCCCCCCCCcCCCCCchhHHHHHHHHHH--hhCCCCEEE
Confidence 689999999999999999998886 7899999887755332 224458999999999999999986 789999999
Q ss_pred EEeccCCCCCCceEecHHHHHHHHHHHHHHHH-hh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCCCCHHHHH
Q 007715 196 VWREDRCDESAVNLMTYKELREQVMLVANALD-TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIA 273 (592)
Q Consensus 196 ~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~-~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~~~~~~l~ 273 (592)
++.+. +.+..+++||+||+++++++|++|+ ++ |++||+|+|+++|++++++++|||+++|++++|+++.++.+++.
T Consensus 79 i~~~~--~~g~~~~~Ty~eL~~~v~~~A~~L~~~~Gv~~Gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpi~~~~~~~~l~ 156 (640)
T d1ry2a_ 79 IFEGD--EPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFAGFSSNSLR 156 (640)
T ss_dssp EEECS--STTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHH
T ss_pred EEEec--CCCCeeEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHhccCceEeecCCCCCCHHHHH
Confidence 98653 3456689999999999999999997 67 99999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeeEEEEecceeccCccccchhhHhhcC---CC--cEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCCCCCC
Q 007715 274 TRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---PL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYY 348 (592)
Q Consensus 274 ~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (592)
++++++++++++++.......+.......+.+.. .. ....+.................+........ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 231 (640)
T d1ry2a_ 157 DRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLDWATEKKKYK-----TYY 231 (640)
T ss_dssp HHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCCCSSSEEEHHHHHTTSC-----SCC
T ss_pred HHHHhhhccccccchhhhhccchhhhHHHHHhhhhhhcccceeeeecccccccccccccccccccccccccc-----ccc
Confidence 9999999999999998776666555444443322 11 2222222111111111111112222222111 122
Q ss_pred CCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHH-HhhhhcCCCCCCEEEEecccchhchh-HHHHHHHHcCCEEE
Q 007715 349 SPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLA 426 (592)
Q Consensus 349 ~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv 426 (592)
...+..++|+++|+|||||||+||||+++|++++.... .....++++++|++++.+|++|+.+. +.++++|+.|++++
T Consensus 232 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~~h~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~~v 311 (640)
T d1ry2a_ 232 PCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATL 311 (640)
T ss_dssp CCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHHHHTTHHHHHHTSEEE
T ss_pred ccCCcccccCCEEEECCCCCCCCcceeeccccHHHHHHHHHHhhcCCCcccceeeccchhhhhhHHHHHHHHHHhCCEEE
Confidence 33455678999999999999999999999999766544 44456788999999999999999986 56888999999999
Q ss_pred EeCCC---CChhhHHHHHHHhCCcEEEccHHHHHHHHhcCc--CCCCCCccccEEEEecCCCChhhHHHHHHhcc--CCc
Q 007715 427 LYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNA 499 (592)
Q Consensus 427 l~~~~---~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~--~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~--~~~ 499 (592)
++++. +++..++++|++++||++.++|++++.|.+... ....++++||.+++|||++++++.+++.+.++ ..+
T Consensus 312 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~v~~gG~~l~~~~~~~~~~~~g~~~~~ 391 (640)
T d1ry2a_ 312 VFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIP 391 (640)
T ss_dssp EECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEECSSCCCHHHHHHHHHTTSCSSSC
T ss_pred EecCCCCCCCHHHHHHHHHHhCccEEEcChHHHHHHHhccccccccCCCCceEEEEEecccCcHHHHHHHHHhcCCCcce
Confidence 98753 377899999999999999999999999987643 24567999999999999999999999998876 356
Q ss_pred eeccccchhcccccccCCc--CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-------ecccCCCchhhc
Q 007715 500 IIESCGGTELSSAYIQGSL--LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-------FPLYLGASDRLL 570 (592)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-------~~gY~~~~~~~~ 570 (592)
+++.||+||++........ ..+.+.+++|+|++|++++|+|+++...+.+..+.|||++ +.||++++++|.
T Consensus 392 i~~~yg~te~~~~~~~~~~~~~~~~~~gs~G~p~~g~~~~i~d~~~~~~~~~~~~~Gel~i~~~~p~~~~gy~~~~e~t~ 471 (640)
T d1ry2a_ 392 IVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWKNHDRYL 471 (640)
T ss_dssp EEECBCCTTTCSCSEECCTTTCCCCCTTCCCEECTTCCEEEECSSSTTCEECSSCEEEEEESSCCTTSCCEETTCHHHHH
T ss_pred EEeeecccccccccccccCCCcCCCCCcccccccCCceEEEEeCCCCcccCCCCceEEEEEEecCCCcccccccCHHHHH
Confidence 9999999999865433222 2345678999999999999999776544332222599998 579999999875
Q ss_pred cccc---cccccccCcCC
Q 007715 571 NADH---EEVYFRGMPMY 585 (592)
Q Consensus 571 ~~~~---~~~~f~~~~~~ 585 (592)
+..+ .+||.+||-++
T Consensus 472 ~~~~~~~~gw~~TGDlg~ 489 (640)
T d1ry2a_ 472 DTYLNPYPGYYFTGDGAA 489 (640)
T ss_dssp HHHTSSSTTSEEEEEEEE
T ss_pred hhhccCCCCeEEcCCcee
Confidence 5432 24454555443
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.4e-50 Score=435.16 Aligned_cols=387 Identities=20% Similarity=0.186 Sum_probs=302.1
Q ss_pred ccCCCCcchhhhhhccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 007715 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (592)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~ 244 (592)
.|..+...|..+ .+++++ +++||++|+++.+. ++.+++||+||+++++++|++|.++ +++||+|+|+++|++
T Consensus 4 ~~~~~~~~~l~~-~l~~~a--~~~pd~~av~~~~~----g~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~n~~ 76 (534)
T d1v25a_ 4 STMMDEELNLWD-FLERAA--ALFGRKEVVSRLHT----GEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHF 76 (534)
T ss_dssp CCBCCCCCCTHH-HHHHHH--HHSTTCEEEEECTT----SCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH
T ss_pred CccCCCCCCHHH-HHHHHH--HHcCCCeEEEEecC----CceEEEcHHHHHHHHHHHHHHHHHCCcCCCCEEEEEeCCCH
Confidence 344444455533 455544 89999999998764 4567899999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCC
Q 007715 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIP 324 (592)
Q Consensus 245 e~v~a~lA~~k~Ga~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 324 (592)
++++++|||+++|++++|++|.++.+++.++++++++++++++.... .....+....+.....+.......
T Consensus 77 e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--- 147 (534)
T d1v25a_ 77 RHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLL------PLVEAIRGELKTVQHFVVMDEKAP--- 147 (534)
T ss_dssp HHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGH------HHHHHHGGGCSSCCEEEESSSCCC---
T ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhhccccccccchhh------hhHHHHhhcccccceeEEeecccc---
Confidence 99999999999999999999999999999999999999999988542 233333333333222222111110
Q ss_pred CccCcccHHHhhccCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHh--hhhcCCCCCCEEEE
Q 007715 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG--WAHIDLKVGDVYCW 402 (592)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~--~~~~~~~~~d~~l~ 402 (592)
........... . ........++++++|+|||||||.||||+++|++++...... ...+.....|++++
T Consensus 148 --~~~~~~~~~~~-~-------~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~d~~~~ 217 (534)
T d1v25a_ 148 --EGYLAYEEALG-E-------EADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLP 217 (534)
T ss_dssp --TTCEEHHHHCC-S-------CCCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEE
T ss_pred --ccccccccccc-c-------cccccccccCCcEEEEEecCCCCCccccccccchhhhhhhhhhhhccccccccccccc
Confidence 01111111111 1 112234567899999999999999999999999987655433 34456788999999
Q ss_pred ecccchhchhHHHHHHHHcCCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCC
Q 007715 403 PTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGET 482 (592)
Q Consensus 403 ~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~ 482 (592)
.+|+.|..+....+.+++.|+++++.....++..+..++.+++||++.++|+++..+.+.......++++||.+++||++
T Consensus 218 ~~p~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~lr~~~~gG~~ 297 (534)
T d1v25a_ 218 VVPMFHVNAWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSA 297 (534)
T ss_dssp CSCTTSHHHHTHHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTCCCSSCCEEEECSSC
T ss_pred ccchhhhccccccceeeeecceeeeccccccccccchhhhhccccccccCchhhhhhhhhhccccccccceeEEEEecCC
Confidence 99999999988888889999999998877889999999999999999999999999988765556778999999999999
Q ss_pred CChhhHHHHHHhccCCceeccccchhcccccccCCcCC----------CCccCcccccCCCceEEEECCCCCCCCCCCCc
Q 007715 483 SNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (592)
Q Consensus 483 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~g 552 (592)
++.+..+++... +.++++.||+||++.++....... ....+++|+|++|++++|+|++|+++|.+..+
T Consensus 298 ~~~~~~~~~~~~--~~~i~~~yG~te~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~~~~~ 375 (534)
T d1v25a_ 298 APRSLIARFERM--GVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVADEEGRPVPKDGKA 375 (534)
T ss_dssp CCHHHHHHHHHT--TCEEEEEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEECTTSCBCCSSSCC
T ss_pred CCHHHHHHHHHh--CCeeeeeccccccccceeecccCccccccCccccccccccceeccCCcEEEEECCCCCCCCCCCCe
Confidence 999999888755 468999999999987654432211 11347899999999999999999999885433
Q ss_pred ceeEEE-----ecccCCCchhhccccccccccc
Q 007715 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFR 580 (592)
Q Consensus 553 iGel~v-----~~gY~~~~~~~~~~~~~~~~f~ 580 (592)
+|||+| +.||+|+++.+.+....+.||.
T Consensus 376 ~Gel~v~g~~v~~gY~~~~~~t~~~~~~dg~~~ 408 (534)
T d1v25a_ 376 LGEVQLKGPWITGGYYGNEEATRSALTPDGFFR 408 (534)
T ss_dssp CEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEE
T ss_pred eEEEEEcCCcccceecCChhhhhhhcccCCCCc
Confidence 699999 7899999998866655554554
|
| >d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Luciferase species: Firefly (Photinus pyralis) [TaxId: 7054]
Probab=100.00 E-value=4.9e-49 Score=427.17 Aligned_cols=378 Identities=16% Similarity=0.158 Sum_probs=290.8
Q ss_pred CCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecCCC
Q 007715 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (592)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld~~ 266 (592)
..|+++|+++.+. .+++||+||+++++++|+.|+++ |++||+|+|+++|++++++++|||+++|+++||+++.
T Consensus 32 ~~P~~~a~~d~~~------~~~lTy~el~~~~~~lA~~L~~~Gi~~Gd~Vai~~~ns~e~~v~~lA~~~~G~i~vpl~~~ 105 (541)
T d1lcia_ 32 LVPGTIAFTDAHI------EVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDI 105 (541)
T ss_dssp TSTTCEEEEETTT------CCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCSSTHHHHHHHHHHTCEEEECCTT
T ss_pred CCCCeEEEEeCCC------CeEeeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCCHHHHHHHHHHHHhCeEEEecCCC
Confidence 4599999987543 14899999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCC--CCC
Q 007715 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY--HPR 344 (592)
Q Consensus 267 ~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 344 (592)
++.+++.++|+++++++||++++. .+.+..+...++....++....... .+....+.+....... ...
T Consensus 106 ~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 175 (541)
T d1lcia_ 106 YNERELLNSMNISQPTVVFVSKKG------LQKILNVQKKLPIIQKIIIMDSKTD----YQGFQSMYTFVTSHLPPGFNE 175 (541)
T ss_dssp CCHHHHHHHHHHHCCSEEEECGGG------HHHHHHHHHHCTTCCEEEETTCSSC----BTTBEEHHHHHHHHSCTTCCT
T ss_pred CCHHHHHHHHHhccceEEeeeccc------cccchhccccccccceeeeecCCcc----ccccchhhhhhhhhccccccc
Confidence 999999999999999999999853 2334444455554333332221110 1122233332221111 001
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhh---hcCCCCCCEEEEecccchhchhHHHHHHHHc
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (592)
....+.....++++|||+|||||||.||||+++|++++....+... ...+.+++++++..|+.|..+....+..+..
T Consensus 176 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 255 (541)
T d1lcia_ 176 YDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLIC 255 (541)
T ss_dssp TTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHHH
T ss_pred cccCccccCCCCceEEEEeeccccccccccccccchhhhhhhhhhhhccccccccccccccccccccccccccccccccc
Confidence 1122233445688999999999999999999999998776555443 3357789999999999999998888888889
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCcee
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (592)
|+.+++.. ..+......++.++++|.+.++|+++..+.........++++||.+++||+++++....++...++...++
T Consensus 256 ~~~~~~~~-~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~v~~gG~~~~~~~~~~~~~~~~~~~~~ 334 (541)
T d1lcia_ 256 GFRVVLMY-RFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIR 334 (541)
T ss_dssp TCEEEECS-SCCHHHHHHHHHHTTCSEEECCHHHHHHHHHCSCGGGSCCTTCCEEECTTCCCCHHHHHHHHHHTTCSCCB
T ss_pred cccccccc-ccccchhHHHHhhhhccccccCccccccccccccccccccccceEEEecccccccccccccccccCCceee
Confidence 98888765 56778889999999999999999999999988777777789999999999999999999999888766799
Q ss_pred ccccchhcccccccCCcCCCCccCcccccCCCceEEEEC-CCCCCCCCCCCcceeEEE-----ecccCCCchhhcccccc
Q 007715 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (592)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD-~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~ 575 (592)
+.||+||++..++.. .......+++|+|+||++++|+| ++|+++++|++ |||+| +.||+|+++.+......
T Consensus 335 ~~YG~TE~~~~~~~~-~~~~~~~~svG~p~~~~~~~i~d~d~~~~~~~g~~--Gel~v~g~~~~~gY~~~~~~~~~~~~~ 411 (541)
T d1lcia_ 335 QGYGLTETTSAILIT-PEGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQR--GELCVRGPMIMSGYVNNPEATNALIDK 411 (541)
T ss_dssp CEECCGGGSSCSEEC-CCC---CCCCBEECTTCEEEEECTTTCCBCCTTCC--EEEEEESTTSCSEETTBHHHHHHHBCT
T ss_pred ecCCccccCceEEec-CcccCCCCccccccCCCEEEEEECCCCcCCCCCCe--EEEEEccCccCCeeCCChhhhhhcccC
Confidence 999999998765443 33455678999999999999999 67999999995 99999 78999999876544444
Q ss_pred cccc-ccCcCC
Q 007715 576 EVYF-RGMPMY 585 (592)
Q Consensus 576 ~~~f-~~~~~~ 585 (592)
+.|| ++|-++
T Consensus 412 ~~~~~TGDl~~ 422 (541)
T d1lcia_ 412 DGWLHSGDIAY 422 (541)
T ss_dssp TSCEEEEEEEE
T ss_pred CccccCCCeeE
Confidence 4444 444433
|
| >d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Dihydroxybenzoate-AMP ligase DhbE species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=3.9e-46 Score=403.67 Aligned_cols=372 Identities=16% Similarity=0.129 Sum_probs=287.2
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
|+++||++|+++.++ ++||+||+++++++|++|+++ |++||+|+|+++|++++++++|||+++|+++||++
T Consensus 35 a~~~pd~~Al~~~~~--------~~Ty~el~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~~~~~v~~lA~~~~G~i~vpl~ 106 (536)
T d1mdba_ 35 AAKYGDRIAITCGNT--------HWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFAL 106 (536)
T ss_dssp HHHHTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECC
T ss_pred HHHCCCCeEEEECCE--------eEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEeCCCHHHHHHHHHHHHhCcEEEecC
Confidence 478999999999876 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
|.++.+++.+++++++++++++++........ ..........+.....+..... .....++++..
T Consensus 107 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~------- 171 (536)
T d1mdba_ 107 PSHRSSEITYFCEFAEAAAYIIPDAYSGFDYR-SLARQVQSKLPTLKNIIVAGEA-------EEFLPLEDLHT------- 171 (536)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEESEETTEEHH-HHHHHHHHHCTTCCCEEEESCC-------TTSEEGGGCCC-------
T ss_pred CCCCHHHHHHHHHhhccceEeccchhhhhhhh-hhhhhhhhccccccceeeeecc-------ccccchhhccc-------
Confidence 99999999999999999999998764211100 0011111111111111111000 11122222211
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHH-HHHH-HHcC
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSS-FLNG 422 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~-L~~G 422 (592)
.........++|+++|+|||||||.||||+++|+++...+.+....+++.++|++++..++.|..++.. ++.. +..|
T Consensus 172 -~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~~~~~~~~~~g 250 (536)
T d1mdba_ 172 -EPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAG 250 (536)
T ss_dssp -CCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTT
T ss_pred -CCcCCCccCccchHHhhhcccccccceecccccccccccccccccccccccccccccccccccccceeecccccccccc
Confidence 112233456799999999999999999999999999999988888899999999999999999988742 3334 4445
Q ss_pred CEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhccCCceec
Q 007715 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (592)
Q Consensus 423 ~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (592)
.+++.. ..+++..+...+++++++.+..+|+.+..+..........++++|.+++||+++++....++...++ ...+.
T Consensus 251 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~~~~~~~~~~~~~-~~~~~ 328 (536)
T d1mdba_ 251 GRVVLS-PSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFG-CTLQQ 328 (536)
T ss_dssp CEEEEC-SSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSCCCHHHHTTHHHHTC-SEEEE
T ss_pred cccccc-CCCCHHHHHHHHhhhccccccccchhhhhhhhhccccccccCcceeEEEeccccccccccchhhccC-ceeee
Confidence 555554 4678899999999999999999999999988776556667899999999999999999998888776 67788
Q ss_pred cccchhcccccccCCcCCCCccCcccccCC-CceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchhhccccccc
Q 007715 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATM-TAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEE 576 (592)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~-~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~~~~~~~~~ 576 (592)
.||.+|.+..+...........+++|+|++ +..+.|.+++|+++++|+. |||++ ++||+++++.+.......
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~v~~~~g~~~~~~~~--Gel~v~g~~~~~gY~~~~~~~~~~~~~~ 406 (536)
T d1mdba_ 329 VFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRVWDDHDRDVKPGET--GHLLTRGPYTIRGYYKAEEHNAASFTED 406 (536)
T ss_dssp EEECTTSCEEECCTTSCHHHHHHCCCEESSTTCEEEEECTTSCBCCTTCC--EEEEEECTTSCSSCTTCHHHHHHHBCTT
T ss_pred ccccccccccccccccccccccCCcccCCCCcceEEEEcCCCCeeccccc--ceeecCCCcccccccccccccccccccc
Confidence 888888776544433333445678999986 5677777799999999995 99999 899999998776555554
Q ss_pred ccc-ccCcCC
Q 007715 577 VYF-RGMPMY 585 (592)
Q Consensus 577 ~~f-~~~~~~ 585 (592)
.|| +++.++
T Consensus 407 ~~~~tGD~~~ 416 (536)
T d1mdba_ 407 GFYRTGDIVR 416 (536)
T ss_dssp SCEEEEEEEE
T ss_pred CccccCcccc
Confidence 444 444433
|
| >d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Phenylalanine activating domain of gramicidin synthetase 1 species: Bacillus brevis [TaxId: 1393]
Probab=100.00 E-value=9.3e-46 Score=398.90 Aligned_cols=342 Identities=17% Similarity=0.144 Sum_probs=274.5
Q ss_pred hccccccCCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhC
Q 007715 179 CLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAG 257 (592)
Q Consensus 179 ~~~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~G 257 (592)
+++++ |+++||++|+++.++ ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|
T Consensus 28 l~~~~--a~~~Pd~~Al~~~~~--------~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~~~v~~~la~~~~G 97 (514)
T d1amua_ 28 LFEEQ--VSKRPNNVAIVCENE--------QLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAG 97 (514)
T ss_dssp HHHHH--HHHCTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTT
T ss_pred HHHHH--HHhCCCCeEEEECCe--------eEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 44444 489999999999876 999999999999999999999 9999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhc
Q 007715 258 YVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (592)
Q Consensus 258 a~~vpld~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 337 (592)
++++|+++.++.+++.+++++++++++|++.... ..+.+............. ..
T Consensus 98 ~v~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~~~~~~~~~-----------------~~ 151 (514)
T d1amua_ 98 GAYVPIDIEYPKERIQYILDDSQARMLLTQKHLV---------HLIHNIQFNGQVEIFEED-----------------TI 151 (514)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGH---------HHHTTSCCCSEEEECCCS-----------------TT
T ss_pred cEEEEeCCCCCHHHHHHHHhccCCcEEEEehhhh---------hhhhhhcccccccccccc-----------------cc
Confidence 9999999999999999999999999999987532 222222222222211100 00
Q ss_pred cCCCCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcCCCCCCEEEEecccchhchhHHHHH
Q 007715 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (592)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (592)
... .......+..++++|+|+|||||||.||+|+++|+++..........+....++++++..+++|..+++.++.
T Consensus 152 ~~~----~~~~~~~p~~~~d~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~ 227 (514)
T d1amua_ 152 KIR----EGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFM 227 (514)
T ss_dssp TTS----CCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHHHHH
T ss_pred ccc----ccccCCCCCCcccceEEEEccCCCCCcccccccccccccccccccccccccccccccceeccccccccccccc
Confidence 000 0111223446789999999999999999999999999998888888899999999999999999999999999
Q ss_pred HHHcCCEEEEeCC--CCChhhHHHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecCCCChhhHHHHHHhc
Q 007715 418 SFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (592)
Q Consensus 418 ~L~~G~~lvl~~~--~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~ 495 (592)
+++.|+++++... ..+....++.+..+.++.+..+|..... ....+++++|.+++||+++++++..++..
T Consensus 228 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~G~~~~~~~~~~~~~-- 299 (514)
T d1amua_ 228 ALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVH------LDPERILSIQTLITAGSATSPSLVNKWKE-- 299 (514)
T ss_dssp HHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTT------SCTTTCCSCSEEEEESSCCCHHHHHHHTT--
T ss_pred cccccccccccccccccchhhhhhhhhhhhcccccceeeeccc------ccccccccccEEEEecccCCHHHhhhhcc--
Confidence 9999999998753 2355678899999999999999986543 23456889999999999999999887665
Q ss_pred cCCceeccccchhcccccccCCc--CCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE-----ecccCCCchh
Q 007715 496 WYNAIIESCGGTELSSAYIQGSL--LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDR 568 (592)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v-----~~gY~~~~~~ 568 (592)
+..+++.||+||++.+++.... ......++.|+++++..+.+.|++++++|+|+ +|||+| ++||+++++.
T Consensus 300 -~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~g~--~GEl~v~~~~~~~gY~~~~~~ 376 (514)
T d1amua_ 300 -KVTYINAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDENLQLKSVGE--AGELCIGGEGLARGYWKRPEL 376 (514)
T ss_dssp -TSEEEEEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEEEEEECTTSCBCCTTC--EEEEEEEETTCCCEETTCHHH
T ss_pred -ceeEEEeeccccCceeeeeccccccccCcccccccceeeeeEeeecccceecCCCC--eeEEEEccCcccccccccccc
Confidence 4679999999999876543322 23344578999999999999999999999999 599999 8999999987
Q ss_pred hcc
Q 007715 569 LLN 571 (592)
Q Consensus 569 ~~~ 571 (592)
+..
T Consensus 377 ~~~ 379 (514)
T d1amua_ 377 TSQ 379 (514)
T ss_dssp HHH
T ss_pred cce
Confidence 643
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Probab=100.00 E-value=4.8e-41 Score=359.60 Aligned_cols=365 Identities=16% Similarity=0.079 Sum_probs=276.5
Q ss_pred CCCCCCceEEEEeccCCCCCCceEecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCeEEecC
Q 007715 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (592)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTy~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~~~e~v~a~lA~~k~Ga~~vpld 264 (592)
|+++||++|+++.+.+ +++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++||+
T Consensus 12 a~~~pd~~al~~~~~~------~~~Ty~el~~~~~~~a~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~vpi~ 85 (503)
T d3cw9a1 12 ATRAPDHCALAVPARG------LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLN 85 (503)
T ss_dssp HHHSTTSEEEEEGGGT------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHhCCCCeEEEECCCC------cEEeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCCHHHHHHHHHHHHhCcEEEEeC
Confidence 4899999999987542 4899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEEecceeccCccccchhhHhhcCCCcEEEEcCCCCCCCCCCccCcccHHHhhccCCCCCC
Q 007715 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (592)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (592)
|.++.+++++++++++++++|++... .....+........++. +.++.........
T Consensus 86 ~~~~~~~i~~~l~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~i~-----------------~~~~~~~~~~~~~ 141 (503)
T d3cw9a1 86 PRLKSAELAELIKRGEMTAAVIAVGR-------QVADAIFQSGSGARIIF-----------------LGDLVRDGEPYSY 141 (503)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEESSCH-------HHHHHHHHTTCCCEEEE-----------------HHHHEETTEECCC
T ss_pred CCCCHHHHHHHHHhcCCcEEEeecch-------HHHHHHhhhcccccccc-----------------chhhhhhhccccc
Confidence 99999999999999999999988642 11112222222222211 2222221111001
Q ss_pred CCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEeCCchHHHHHHHhhhhcC--CCCCCEEEEecccchhchhH-HHHHHHHc
Q 007715 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPV-ILFSSFLN 421 (592)
Q Consensus 345 ~~~~~~~~~~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~-~~~~~L~~ 421 (592)
..........++++++|+|||||||.||+|+++|+++...+......+. ....+++++.+|+.+..... ..+.+...
T Consensus 142 ~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 221 (503)
T d3cw9a1 142 GPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALAL 221 (503)
T ss_dssp SCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEGGGHHHHHHHHHHTSCCCSSTTCEEEECSCTTSHHHHHTTHHHHHHT
T ss_pred CCccccccchhhhhhhhcccccccccccccccccchhhhhhhhccccccccccccccccccCcccccccccccccccccc
Confidence 1122233456789999999999999999999999999888776655443 45668899999988877764 45566677
Q ss_pred CCEEEEeCCCCChhhHHHHHHHhCCcEEEccHHHHHHHHhcC--cCCCCCCccccEEEEecCCCChhhHHHHHHhccCCc
Q 007715 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN--CLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (592)
Q Consensus 422 G~~lvl~~~~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~~~--~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (592)
++++++.+ ..++..+...+.+++++++..+|+.+..+.... ......+++||.+++|||+++++...++...++ ..
T Consensus 222 ~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~-~~ 299 (503)
T d3cw9a1 222 DGTYVVVE-EFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLP-GE 299 (503)
T ss_dssp TCEEEECS-SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHHHTCTTCCCTTCCEEEECSSCCCHHHHHHHHHHCC-SE
T ss_pred cccccccc-ccChHHhhhhhhhceeeccccccccccccccccccccccccccceEEEEecccccccccccccccccc-cc
Confidence 77777765 668889999999999999999999988776542 223455789999999999999999988887765 67
Q ss_pred eeccccchhcccccccCCcCCCCccCcccccCCCceEEEECCCCCCCCCCCCcceeEEE------ecccCCCchhhcccc
Q 007715 500 IIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL------FPLYLGASDRLLNAD 573 (592)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~v~IlD~~g~~vp~G~~giGel~v------~~gY~~~~~~~~~~~ 573 (592)
+.+.||.||++..+..... ......+.+.+.+...+.+.+..++.++.|+. |++.+ ..||+++++.+....
T Consensus 300 ~~~~yg~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--g~~~~~~~~~~~~~~~~~~~~t~~~~ 376 (503)
T d3cw9a1 300 KVNIYGTTEAMNSLYMRQP-KTGTEMAPGFFSEVRIVRIGGGVDEIVANGEE--GELIVAASDSAFVGYLNQPQATAEKL 376 (503)
T ss_dssp EEEEEEETTTEEEEEEESC-SSSSEEBCCTTCCEEEECTTSCTTCBCCTTCC--EEEEEECCTTSCCCBTTCHHHHHHHE
T ss_pred ccccccccccceeeeeccc-cccccccccccccceeeeeecccCcccCCCcc--ccccccccccccccccCChhhhHHHh
Confidence 9999999999865443332 22333455666667777777888999999996 87776 678889988764443
Q ss_pred ccccccccCcCC
Q 007715 574 HEEVYFRGMPMY 585 (592)
Q Consensus 574 ~~~~~f~~~~~~ 585 (592)
..+||.++|.++
T Consensus 377 ~~g~~~TgD~g~ 388 (503)
T d3cw9a1 377 QDGWYRTSDVAV 388 (503)
T ss_dssp ETTEEEEEEEEE
T ss_pred cCCceecccccc
Confidence 344554555554
|
| >d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: VibH species: Vibrio cholerae [TaxId: 666]
Probab=98.15 E-value=2.5e-09 Score=101.23 Aligned_cols=133 Identities=7% Similarity=-0.068 Sum_probs=97.8
Q ss_pred HHHhhCCChhHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHhcCCCCCCchhHHHHHhhhcccccccCCCCCCc---C
Q 007715 12 DLMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYW---F 87 (592)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~lv~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~~~~---~ 87 (592)
++.|+++.++...+|.++++++++...++ .||++||+. |++.++..+. .+ ++|+++|++++.....-... .
T Consensus 103 n~lP~r~~~~~~~t~~~ll~~v~~~~~~~~~h~~~~~~~-i~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~ 177 (250)
T d1l5aa2 103 NSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQ-IEQDQGLNAE--QS--YFMSPFINILPFESPHFADCQTEL 177 (250)
T ss_dssp EEEEEECCCCTTCBHHHHHHHHHHHHHHHHHTTTSCHHH-HHHHTTCCTT--CC--BCCCSEEEEECCCCCCCTTCEEEE
T ss_pred eeeeEEEEeCCCCCHHHHHHHHHHHHHHhhhhcCCCHHH-HHHHhcCCCC--CC--CccceEEEeeccCccCCCCCceEE
Confidence 57899999999999999999999998877 999999999 9998854332 33 45999999876443211000 0
Q ss_pred CCccccccccHHHHHHHh-CCcccccc-CCCCCcCHHHHHHHHhhCHHHHHHHHHhhccceeecccccc
Q 007715 88 PSLDQSKLTNLGNALEIH-GPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI 154 (592)
Q Consensus 88 ~~~~~~~~~dl~~~~~~~-~~~~~~~~-y~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~ 154 (592)
.........|+.+.+... ++.+...+ |+. ++|+.++|+.+.++|.++|+++..+++.+..++
T Consensus 178 ~~~~~~~~~dl~l~v~~~~~~~l~l~~~y~~-----~~~~~~~i~~l~~~~~~ll~~l~~~p~~~~~~l 241 (250)
T d1l5aa2 178 KVLASGSAEGINFTFRGSPQHELCLDITADL-----ASYPQSHWQSHCERFPRFFEQLLARFQQVEQDV 241 (250)
T ss_dssp EEEEECCCCSEEEEEEECTTSCEEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHHHHHHTTTTCH
T ss_pred EeeeccceeeEEEEEEEcCCceEEEEEEEeh-----hhCCHHHHHHHHHHHHHHHHHHHhCcCcccchh
Confidence 001122334666665544 44577788 988 999999999999999999999987777666554
|
| >d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Long chain fatty acid-CoA ligase TT0168 species: Thermus thermophilus [TaxId: 274]
Probab=88.49 E-value=2.8 Score=41.41 Aligned_cols=102 Identities=16% Similarity=-0.008 Sum_probs=76.0
Q ss_pred CCCCeEEEEeCCCCCCCCcEEEeCCchHHHH---HHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCC
Q 007715 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (592)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (592)
.||.+|++...+|- .-.+|.+.+... +.......+++++|++....+-+.... ..+|+++..|+..+.++.
T Consensus 24 ~pd~~av~~~~~g~-----~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl~~ 97 (534)
T d1v25a_ 24 FGRKEVVSRLHTGE-----VHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHL-EAYFAVPGMGAVLHTANP 97 (534)
T ss_dssp STTCEEEEECTTSC-----EEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHH-HHHHHHHHTTCEEEECCT
T ss_pred cCCCeEEEEecCCc-----eEEEcHHHHHHHHHHHHHHHHHCCcCCCCEEEEEeCCCHHHH-HHHHHHHHhCcEEEecCC
Confidence 46788876655542 234677766443 344445678999999988887766543 457789999999999887
Q ss_pred CCChhhHHHHHHHhCCcEEEccHHHHHHHHh
Q 007715 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAWRN 461 (592)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps~l~~l~~ 461 (592)
....+.+...++..++..++........+..
T Consensus 98 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 128 (534)
T d1v25a_ 98 RLSPKEIAYILNHAEDKVLLFDPNLLPLVEA 128 (534)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECGGGHHHHHH
T ss_pred CCCHHHHHHHHHhhccccccccchhhhhHHH
Confidence 7788899999999999999988877766554
|
| >d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Luciferase species: Firefly (Photinus pyralis) [TaxId: 7054]
Probab=87.88 E-value=0.63 Score=46.53 Aligned_cols=112 Identities=13% Similarity=0.039 Sum_probs=78.5
Q ss_pred EEeCCCCCCCCcEEEeCCchHHHHH---HHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCCCCChhhH
Q 007715 361 ILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSF 437 (592)
Q Consensus 361 iiyTSGTTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~~~~~~~l 437 (592)
+.++.+.++ ..+|++.+...+ .......+++++|++....+-+.+.. ..+++++..|+..+.++.....+.+
T Consensus 37 ~a~~d~~~~----~~lTy~el~~~~~~lA~~L~~~Gi~~Gd~Vai~~~ns~e~~-v~~lA~~~~G~i~vpl~~~~~~~~l 111 (541)
T d1lcia_ 37 IAFTDAHIE----VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFF-MPVLGALFIGVAVAPANDIYNEREL 111 (541)
T ss_dssp EEEEETTTC----CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCSSTH-HHHHHHHHHTCEEEECCTTCCHHHH
T ss_pred EEEEeCCCC----eEeeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCCHHHH-HHHHHHHHhCeEEEecCCCCCHHHH
Confidence 334455544 357888775443 33345568999999988776664433 4467889999999988777778899
Q ss_pred HHHHHHhCCcEEEccHHHHHHHHhcCcCCCCCCccccEEEEecC
Q 007715 438 GKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481 (592)
Q Consensus 438 ~~~i~~~~vt~l~~~Ps~l~~l~~~~~~~~~~l~sLr~v~~gGe 481 (592)
...++..+++++++....+..+.+... .++.++.+++...
T Consensus 112 ~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 151 (541)
T d1lcia_ 112 LNSMNISQPTVVFVSKKGLQKILNVQK----KLPIIQKIIIMDS 151 (541)
T ss_dssp HHHHHHHCCSEEEECGGGHHHHHHHHH----HCTTCCEEEETTC
T ss_pred HHHHHhccceEEeeeccccccchhccc----cccccceeeeecC
Confidence 999999999999999988777654321 2455666665443
|
| >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: Acetyl-CoA synthetase species: Salmonella enterica [TaxId: 28901]
Probab=80.77 E-value=3.1 Score=42.64 Aligned_cols=95 Identities=17% Similarity=0.072 Sum_probs=70.5
Q ss_pred CCCCeEEEEeCCCCCCCCcEEEeCCchHHHH---HHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCC
Q 007715 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (592)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (592)
.+|.+|+|.. +-.+|..| .+|.+.+... +.......+++++|++...++-+.... ..+++++..|+..+.++.
T Consensus 85 ~~d~~Ali~~-~~~~~~~~--~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~i-v~~lA~~~~Gav~v~l~~ 160 (643)
T d1pg4a_ 85 NGDRTAIIWE-GDDTSQSK--HISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAA-VAMLACARIGAVHSVIFG 160 (643)
T ss_dssp HTTSEEEEEE-CSSTTCEE--EEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHH-HHHHHHHHHTCEEEECCT
T ss_pred CCCCEEEEEE-ecCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHH-HHHHHHHHhCeEEEecCC
Confidence 4678887654 33344433 5777776543 334445678999999999888776554 447789999999999887
Q ss_pred CCChhhHHHHHHHhCCcEEEcc
Q 007715 431 SPLERSFGKFVQDAGVTVLGTV 452 (592)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~ 452 (592)
...++.+...+++.++.++++.
T Consensus 161 ~~~~~~l~~~l~~~~~~~li~~ 182 (643)
T d1pg4a_ 161 GFSPEAVAGCIIDSSSRLVITA 182 (643)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEE
T ss_pred CCCHHHHHHHHHhcCCCEEEEc
Confidence 7788999999999999998864
|
| >d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Acetyl-CoA synthetase-like superfamily: Acetyl-CoA synthetase-like family: Acetyl-CoA synthetase-like domain: 4-chlorobenzoyl CoA ligase species: Alcaligenes sp. [TaxId: 512]
Probab=80.21 E-value=3 Score=40.45 Aligned_cols=93 Identities=11% Similarity=-0.002 Sum_probs=67.8
Q ss_pred CCCCeEEEEeCCCCCCCCcEEEeCCchHHHH---HHHhhhhcCCCCCCEEEEecccchhchhHHHHHHHHcCCEEEEeCC
Q 007715 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (592)
Q Consensus 354 ~~~~~a~iiyTSGTTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvl~~~ 430 (592)
.||.+|++.-.+| ..+|.+.+... +.......+++++|++....+-+.+.. ..+|+++..|+..+.++.
T Consensus 15 ~pd~~al~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~Gv~~gd~V~i~~~n~~~~~-~~~lA~~~~G~v~vpi~~ 86 (503)
T d3cw9a1 15 APDHCALAVPARG-------LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVV-IAILALHRLGAVPALLNP 86 (503)
T ss_dssp STTSEEEEEGGGT-------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHH-HHHHHHHHHTCEEEEECT
T ss_pred CCCCeEEEECCCC-------cEEeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCCHHHH-HHHHHHHHhCcEEEEeCC
Confidence 4677887654444 24777766433 333445568899999988877665444 347789999999999987
Q ss_pred CCChhhHHHHHHHhCCcEEEccHH
Q 007715 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (592)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~Ps 454 (592)
...++.+..++++.++..+.....
T Consensus 87 ~~~~~~i~~~l~~~~~~~~i~~~~ 110 (503)
T d3cw9a1 87 RLKSAELAELIKRGEMTAAVIAVG 110 (503)
T ss_dssp TSCHHHHHHHHHHTTCSEEEESSC
T ss_pred CCCHHHHHHHHHhcCCcEEEeecc
Confidence 778889999999999998876543
|