Citrus Sinensis ID: 007730

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-
MGGYKKQARTSDQSSIKCRCNPVEGASFELADFVSKEDALALADNSKQTNKKAEPKSPMILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQVL
cccccccccccccccccEEEEccccccccccccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccHHHHcccccccccccccccccccccEEEEEccccccccccccHHHccccccccEEEEccccccccccEEEEEEccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccHHHccccccccccccccccHHcccccccccccHHccccccccHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccEEEccHHHHHHHHHcccccccHHHHHHHHHHHcccccccccHHHHHHccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHccc
cccccccccccccccEEEEEcccccccccHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEccccccccccccccccHHHHEcccccccEEEccccccEEEEcccccccccccccHHHHcccEEEEEEEccccccccHHHHHHHHHcccccccccHccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEcccccHHHHHEEEEEccccccccHHHHHHHHHHHHHccccEEcccccccHcHEEEccccHEEEEcccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHEHccccHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcc
mggykkqartsdqssikcrcnpvegasfeladfvsKEDALALAdnskqtnkkaepkspmiLSTAQLIAAVGQLWDSANRLaifhpkgnlidshsECKKEVLRNldkeenawvplstdskyfcvdvssagqfspmvqpnleFLKVTQkmsvfdscskkfaHSTFWTFLrsgaslsndtcvwglasagipyqlgnvhrwmtekfpagftyadsipdsekreageqcilgdttgcagasisgdtlspaskpatedhnksdlskskgqsscfnAKLMMSTRTTKSLLSDYFLKdvsdmkedcdvtrqpcsslcadycinsvassngtcekCRHLMDDDALlenkrnqsdknvvedenkmefhspktekphlslAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIAsniassapiSAVYAFTYESvkgallphlpkefhslahctaggcasvatsfiftpseRIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGwgavlcrnvphsIVKFYTYESLkqmmlpslkpgaqpntietlicggvagstaalfttpfdvvKTRLQTQVL
mggykkqartsdqssikcrcNPVEGASFELADFVSKEDALALAdnskqtnkkaepkspMILSTAQLIAAVGQLWDSANRLAIFHPkgnlidshSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATedhnksdlskskgqsscFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALlenkrnqsdknvvedenkMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSChteqksivyigrSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAAlfttpfdvvktrlqtqvl
MGGYKKQARTSDQSSIKCRCNPVEGASFELADFVSKEDALALADNSKQTNKKAEPKSPMILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGiasniassapisaVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQVL
*******************C**V*GASFELADFV*************************ILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADS************CILGDTTGC**********************************************TKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLM******************************************HAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTR******
*******************CNPVEGASFELADFV*****************************AQLIAAVGQLWDSANRLAIF***************EVLRNLDKEENAWVPLSTDSKYFC***************NLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMT*************************ILGDTTGCAGASISGDTLSPASKPATEDHNKS*****************MSTRTTKSLLSDYFLKDVSD**************LCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSD************************AKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCH****SIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMM**********NTIETLICGGVAGSTAALFTTPFDVVKTRLQTQV*
****************KCRCNPVEGASFELADFVSKEDALALAD************SPMILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGD************************SSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQVL
*************SSIKCRCNPVEGASFELADFVSKEDALALA************KSPMILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQV*
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
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MGGYKKQARTSDQSSIKCRCNPVEGASFELADFVSKEDALALADNSKQTNKKAEPKSPMILSTAQLIAAVGQLWDSANRLAIFHPKGNLIDSHSECKKEVLRNLDKEENAWVPLSTDSKYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGASISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQVL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query591 2.2.26 [Sep-21-2011]
Q55DY8308 Mitoferrin OS=Dictyosteli yes no 0.363 0.698 0.358 1e-23
Q03829368 Uncharacterized mitochond yes no 0.353 0.567 0.317 1e-23
Q75AH6 911 Mitochondrial aspartate-g yes no 0.341 0.221 0.348 2e-23
Q9FHX2412 Protein MITOFERRINLIKE 1, no no 0.340 0.487 0.358 4e-23
P10566314 Mitochondrial RNA-splicin no no 0.353 0.665 0.307 4e-21
O14281303 Uncharacterized mitochond yes no 0.350 0.683 0.322 4e-21
Q4V9P0267 S-adenosylmethionine mito yes no 0.328 0.726 0.307 1e-20
Q54MZ4434 Mitochondrial substrate c no no 0.357 0.486 0.281 2e-20
Q12482 902 Mitochondrial aspartate-g no no 0.331 0.217 0.329 3e-20
Q10442345 Uncharacterized mitochond no no 0.358 0.614 0.325 4e-20
>sp|Q55DY8|MFRN_DICDI Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1 Back     alignment and function desciption
 Score =  112 bits (279), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 8/223 (3%)

Query: 374 HAFAGALAGVFVSLCLHPVDTVKTVIQSCH--TEQKSIVYIGRSIVSERGLTGLYRGIAS 431
           H  AGA AG      ++P+DT+KT IQ+      Q S + I + I+ + G+TGL+RG+ +
Sbjct: 19  HLIAGAAAGFAEHCGMYPIDTIKTHIQAIKPGAMQTSSLQITKHIIQQHGITGLFRGLTA 78

Query: 432 NIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQ 491
             A +AP  AV+   YE +K   +    ++ H +    AG  A++ +  + +P + +KQ+
Sbjct: 79  VAAGAAPSHAVHFSIYELLKFKFIGS-DEDHHPIKVGIAGAIATMTSEAVASPMDVVKQR 137

Query: 492 MQVG-SRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSL 550
           +Q+  + Y    +    I    G+   Y+G+   L  NVP++IV F +YESLK+++ P  
Sbjct: 138 LQLQITDYKGLTDCTKRIWVKEGIRGFYSGYTTTLVMNVPYNIVYFASYESLKKIIQPWF 197

Query: 551 K---PGAQP-NTIETLICGGVAGSTAALFTTPFDVVKTRLQTQ 589
               P  +    I+ L+ GG AG  AA FT PFDVVKTRLQTQ
Sbjct: 198 NNKNPEERSYQLIDHLVAGGGAGMLAAAFTNPFDVVKTRLQTQ 240
Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. Mitochondrial iron transporter that mediates iron uptake. Probably required for heme synthesis of hemoproteins and Fe-S cluster assembly.
Dictyostelium discoideum (taxid: 44689)
>sp|Q03829|YM39_YEAST Uncharacterized mitochondrial carrier YMR166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR166C PE=1 SV=1 Back     alignment and function description
>sp|Q75AH6|AGC1_ASHGO Mitochondrial aspartate-glutamate transporter AGC1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AGC1 PE=3 SV=2 Back     alignment and function description
>sp|Q9FHX2|MFL1_ARATH Protein MITOFERRINLIKE 1, chloroplastic OS=Arabidopsis thaliana GN=MFL1 PE=2 SV=1 Back     alignment and function description
>sp|P10566|MRS3_YEAST Mitochondrial RNA-splicing protein MRS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRS3 PE=1 SV=4 Back     alignment and function description
>sp|O14281|YETC_SCHPO Uncharacterized mitochondrial carrier C8C9.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC8C9.12c PE=3 SV=1 Back     alignment and function description
>sp|Q4V9P0|SAMC_DANRE S-adenosylmethionine mitochondrial carrier protein OS=Danio rerio GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function description
>sp|Q12482|AGC1_YEAST Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGC1 PE=1 SV=1 Back     alignment and function description
>sp|Q10442|YDE9_SCHPO Uncharacterized mitochondrial carrier C12B10.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC12B10.09 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query591
359474009 703 PREDICTED: uncharacterized protein LOC10 0.967 0.813 0.546 1e-166
297742520615 unnamed protein product [Vitis vinifera] 0.884 0.850 0.566 1e-161
255537479663 mitochondrial carrier protein, putative 0.962 0.858 0.510 1e-143
224074933620 predicted protein [Populus trichocarpa] 0.908 0.866 0.473 1e-142
356527632650 PREDICTED: uncharacterized protein LOC10 0.957 0.870 0.505 1e-138
356511492643 PREDICTED: uncharacterized protein LOC10 0.950 0.874 0.492 1e-136
449452466676 PREDICTED: uncharacterized protein LOC10 0.961 0.840 0.477 1e-130
147815114 1742 hypothetical protein VITISV_000953 [Viti 0.939 0.318 0.447 1e-127
357520431597 Mitochondrial substrate carrier family p 0.815 0.807 0.464 1e-116
145340110628 Mitochondrial substrate carrier family p 0.873 0.821 0.425 1e-107
>gi|359474009|ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853340 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 325/595 (54%), Positives = 398/595 (66%), Gaps = 23/595 (3%)

Query: 1   MGGYKKQARTSDQSSIKCRCNPVEGASFELADFVSKEDALALADNSKQTNKKAEPKSPMI 60
           MG   KQ +  DQ S   R   ++ ASFE   FV ++    L DN  +  K  E KS  I
Sbjct: 1   MGFCSKQPK-RDQPSTNYRYKSLKQASFE---FVHEDYGGTLPDNDNRRAKVMESKSCEI 56

Query: 61  LSTAQLIAAVGQLWDSANR-LAIFHPKGNLIDSHSECKKE-VLRNLDKEENAWVPLSTDS 118
           LSTA+LI+AVGQ+WD A+R L+IF PK N   + ++  KE VL  L  E    VP S +S
Sbjct: 57  LSTAELISAVGQIWDCASRPLSIFQPKANSKHNDTDSNKEKVLCYLGGEGYVRVPTSANS 116

Query: 119 KYFCVDVSSAGQFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTC 178
           KYFC+D+ +A  FSPMVQPN+E L +TQKMS+F+  +   AHS F   LR GA++ N+T 
Sbjct: 117 KYFCIDLKTASLFSPMVQPNIEHLNITQKMSLFEPGNGNNAHSFFLRCLRGGANMPNET- 175

Query: 179 VW---GLASAGIPYQLGNVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAGA 235
            W   GL + GI Y LGN++RWM++           I   E  +  E CI  D T  AG 
Sbjct: 176 -WKEMGLTNVGISYDLGNIYRWMSKITLDTLRSPVDITQIENMKTKECCISKDATNTAGC 234

Query: 236 SISGDTLSPASKPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDYFLKDVSDMK 295
            I+ D   PA+ PATE    +D      + +  N ++M    +  SL +DYFL     + 
Sbjct: 235 GINIDVAIPANHPATES---ADCYTGVTEGNGANERVMNIGVSISSLCTDYFLGADHGIA 291

Query: 296 EDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKM 355
               ++R P S L AD   N ++S++   E+C+H  +         ++  + V +D+ KM
Sbjct: 292 AGDSISRTPSSELHADS--NFLSSTDFAFEECQHKTEG-------VDRQKEFVTKDKLKM 342

Query: 356 EFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRS 415
           E    K +K H  LAKQEHAFAGA AGVFVSLCLHPVDT+KTVIQSC  +QKSI  +GR 
Sbjct: 343 ETCPSKQDKHHYVLAKQEHAFAGAFAGVFVSLCLHPVDTIKTVIQSCQADQKSIFSVGRL 402

Query: 416 IVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCAS 475
           I+S+RGL G YRGI SNIASSAPISAVY FTYESVKGALLP  PKE HS+AHC AGGCAS
Sbjct: 403 IISQRGLAGFYRGITSNIASSAPISAVYTFTYESVKGALLPLFPKECHSIAHCMAGGCAS 462

Query: 476 VATSFIFTPSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVK 535
           +ATSFIFTPSE IKQQMQ+GS Y NCWNALVGIIK GGL SLYAGWGAVLCRNVPHSI+K
Sbjct: 463 IATSFIFTPSEHIKQQMQIGSHYQNCWNALVGIIKKGGLPSLYAGWGAVLCRNVPHSIIK 522

Query: 536 FYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQV 590
           FYTYESLKQ+MLPSL+P A+PNT++TL CGG+AGSTAA FTTPFDVVKTRLQTQ+
Sbjct: 523 FYTYESLKQLMLPSLQPNAKPNTLQTLACGGLAGSTAAFFTTPFDVVKTRLQTQI 577

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297742520|emb|CBI34669.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255537479|ref|XP_002509806.1| mitochondrial carrier protein, putative [Ricinus communis] gi|223549705|gb|EEF51193.1| mitochondrial carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224074933|ref|XP_002304496.1| predicted protein [Populus trichocarpa] gi|222841928|gb|EEE79475.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356527632|ref|XP_003532412.1| PREDICTED: uncharacterized protein LOC100812271 [Glycine max] Back     alignment and taxonomy information
>gi|356511492|ref|XP_003524460.1| PREDICTED: uncharacterized protein LOC100778143 [Glycine max] Back     alignment and taxonomy information
>gi|449452466|ref|XP_004143980.1| PREDICTED: uncharacterized protein LOC101216245 [Cucumis sativus] gi|449531539|ref|XP_004172743.1| PREDICTED: uncharacterized LOC101216245 [Cucumis sativus] Back     alignment and taxonomy information
>gi|147815114|emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357520431|ref|XP_003630504.1| Mitochondrial substrate carrier family protein P [Medicago truncatula] gi|355524526|gb|AET04980.1| Mitochondrial substrate carrier family protein P [Medicago truncatula] Back     alignment and taxonomy information
>gi|145340110|ref|NP_192883.2| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|332657612|gb|AEE83012.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query591
TAIR|locus:2123096628 AT4G11440 [Arabidopsis thalian 0.742 0.699 0.468 2.3e-97
DICTYBASE|DDB_G0269470308 mcfF "putative mitoferrin" [Di 0.362 0.694 0.348 4.9e-27
TAIR|locus:2060811331 AT2G30160 [Arabidopsis thalian 0.357 0.637 0.342 7.6e-25
TAIR|locus:2007387326 AT1G07030 [Arabidopsis thalian 0.382 0.693 0.313 2.7e-24
TAIR|locus:2165755412 Mfl1 "MitoFerrinLike1" [Arabid 0.351 0.504 0.358 3.6e-24
TAIR|locus:505006167345 SAMC2 "S-adenosylmethionine ca 0.402 0.689 0.315 4.2e-23
TAIR|locus:2122452325 SAMC1 "S-adenosylmethionine ca 0.373 0.68 0.331 2.4e-22
ZFIN|ZDB-GENE-031118-202332 slc25a37 "solute carrier famil 0.368 0.656 0.321 1.1e-21
UNIPROTKB|E1C4L1267 SLC25A26 "Uncharacterized prot 0.331 0.734 0.338 1.4e-21
MGI|MGI:1914832274 Slc25a26 "solute carrier famil 0.331 0.715 0.328 4.9e-21
TAIR|locus:2123096 AT4G11440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 925 (330.7 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
 Identities = 220/470 (46%), Positives = 280/470 (59%)

Query:   130 QFSPMVQPNLEFLKVTQKMSVFDSCSKKFAHSTFWTFLRSGASLSNDTCVWGLASAGIPY 189
             Q S   Q  +  L V +KM  FD  ++K         L +    S   C       G P+
Sbjct:   101 QLSSTPQSRVRLLGVAEKMYSFDPYNRKS--------LLNQTDGSKSIC-GSCKGIGFPF 151

Query:   190 QLG--NVHRWMTEKFPAGFTYADSIPDSEKREAGEQCILGDTTGCAG-ASISGDTLSPAS 246
             +     ++ WM    P+   Y +   + EKRE  E CIL   +     AS +GD      
Sbjct:   152 EARWKTLYSWMEGVLPSSTRYHEEGAEIEKRENFEGCILNPVSSKEELASRNGDGCDCVF 211

Query:   247 KPATEDHNKSDLSKSKGQSSCFNAKLMMSTRTTKSLLSDY-FL--KDVSDMKEDCDVTRQ 303
               A    ++S + + +       A+ ++ TR ++S   +Y FL  KD     +  ++   
Sbjct:   212 D-AIGAKDQSTVIEPRSLLLATVAESVVDTRVSRSNDVNYLFLLYKDRCVNNKGVNMISS 270

Query:   304 PCSSLCADYCINSVASSNGTCEKCRHLMDDDALLENKRNQSDKNVVEDENKMEFHSPKTE 363
              CS+ C D  ++S  S N   E C  ++++  LLE  RN  DK     E ++   SP+T 
Sbjct:   271 KCSTDC-DAEVSS--SGNNLDEDCLSIVENKQLLEKDRN--DK-----ETEVCLSSPETT 320

Query:   364 KPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHTEQKSIVYIGRSIVSERGLT 423
                 + AKQ HAFAGALAG+ VSLCLHP+DTVKT+IQSC  E+KS+   GRSI+SERG +
Sbjct:   321 T--YAFAKQRHAFAGALAGISVSLCLHPLDTVKTMIQSCRLEEKSLCNTGRSIISERGFS 378

Query:   424 GLYRGXXXXXXXXXXXXXVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFT 483
             GLYRG             +Y FTYE+VKG LLP  PKE+ SLAHC AGG AS+ATSFIFT
Sbjct:   379 GLYRGIASNIASSAPISALYTFTYETVKGTLLPLFPKEYCSLAHCLAGGSASIATSFIFT 438

Query:   484 PSERIKQQMQVGSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLK 543
             PSERIKQQMQV S Y NCW ALVGII+ GGL SLYAGW AVLCRN+PHSI+KFY YE++K
Sbjct:   439 PSERIKQQMQVSSHYRNCWTALVGIIQKGGLLSLYAGWTAVLCRNIPHSIIKFYVYENMK 498

Query:   544 QMMLPSLKP-G--AQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQV 590
             QM+LPS  P G  AQP T++TL CGG+AGS AA FTTPFDVVKTRLQTQ+
Sbjct:   499 QMVLPSPGPCGEMAQPTTLQTLTCGGLAGSAAAFFTTPFDVVKTRLQTQI 548
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=ISS
DICTYBASE|DDB_G0269470 mcfF "putative mitoferrin" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2060811 AT2G30160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007387 AT1G07030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165755 Mfl1 "MitoFerrinLike1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006167 SAMC2 "S-adenosylmethionine carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122452 SAMC1 "S-adenosylmethionine carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-031118-202 slc25a37 "solute carrier family 25, member 37" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C4L1 SLC25A26 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1914832 Slc25a26 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_III1045
hypothetical protein (620 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query591
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-19
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-18
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-18
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 9e-09
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-05
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 82.3 bits (204), Expect = 4e-19
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 460 KEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQV-----GSRYHNCWNALVGIIKNGGL 514
                LA   AGG A    + +  P + +K ++Q        +Y    +    I K  G+
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60

Query: 515 HSLYAGWGAVLCRNVPHSIVKFYTYESLKQMML 547
             LY G    L R  P + + F TYE+LK+++L
Sbjct: 61  RGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLL 93

Length = 96
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 591
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 99.98
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.98
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
KOG0036463 consensus Predicted mitochondrial carrier protein 99.97
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0766297 consensus Predicted mitochondrial carrier protein 99.97
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0765333 consensus Predicted mitochondrial carrier protein 99.96
KOG0769308 consensus Predicted mitochondrial carrier protein 99.95
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.95
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.95
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.95
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.94
KOG1519297 consensus Predicted mitochondrial carrier protein 99.78
KOG2745321 consensus Mitochondrial carrier protein [General f 99.73
KOG1519297 consensus Predicted mitochondrial carrier protein 99.61
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.6
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.52
KOG2745321 consensus Mitochondrial carrier protein [General f 99.32
KOG2954427 consensus Mitochondrial carrier protein [General f 98.91
KOG2954427 consensus Mitochondrial carrier protein [General f 98.14
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=4.4e-45  Score=375.90  Aligned_cols=257  Identities=23%  Similarity=0.333  Sum_probs=226.1

Q ss_pred             cCCCCChhhhhhhhcccc------cCCChhHHHHHHHhhhcccccccccccccccchhccccccccchhhHHHHHHhhhh
Q 007730          261 SKGQSSCFNAKLMMSTRT------TKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMDDD  334 (591)
Q Consensus       261 ~~~~~PLD~vKtRmQ~~~------~~~~~~~~~l~tl~~ig~~~GLyRGl~~~L~~~~~~~~~si~F~~Ye~~k~~l~~~  334 (591)
                      ..+..|||++|+|+|++.      .+.+....+..+++++| .+|||||..++++..+++.++  .|.+||.+|+.+...
T Consensus        42 rt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG-~~g~wkGn~~~~~r~~pY~av--qf~aye~~k~~~~~~  118 (320)
T KOG0752|consen   42 RTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEG-LRGFWKGNGPAQIRIIPYGAV--QFSAYEQYKKLVLGV  118 (320)
T ss_pred             HHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhc-hhhhhcCcccceeeeeecchh--hhhHHHHhhhhhhcc
Confidence            355689999999999993      45566778899999999 999999999999999998888  999999999842111


Q ss_pred             hhhhhhhccCCccchhcchhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHchHHHHHHHHhcCCC--CCCCHHHH
Q 007730          335 ALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHT--EQKSIVYI  412 (591)
Q Consensus       335 ~l~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lAG~~Ag~~s~~v~~Ple~IKtRlQ~~~~--~~~s~~~~  412 (591)
                                                   ......+...+++||++||+++++++||||++|||+-++..  .|+++.++
T Consensus       119 -----------------------------~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a  169 (320)
T KOG0752|consen  119 -----------------------------DPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHA  169 (320)
T ss_pred             -----------------------------CcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHH
Confidence                                         00113466789999999999999999999999999998876  49999999


Q ss_pred             HHHHHHhcCcccccccchhhhhhccccccchhhhhhhhcc-ccCCCCC-cccchhhhhhhhhhhhhhhhhhccchhhhhH
Q 007730          413 GRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKG-ALLPHLP-KEFHSLAHCTAGGCASVATSFIFTPSERIKQ  490 (591)
Q Consensus       413 ir~I~r~eGi~gLYrGl~~tllr~~p~s~i~f~~Ye~lk~-~l~~~~~-~~~~~~~~~laG~~Ag~vas~vt~PlDvIKt  490 (591)
                      +++|+++||++|||||+.|++++.+|+.++.|.+||.+|+ .+....+ ++.+.+..+++|++||+++.+++||||+||.
T Consensus       170 ~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRr  249 (320)
T KOG0752|consen  170 FKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRR  249 (320)
T ss_pred             HHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHH
Confidence            9999999999999999999999999999999999999999 4433332 4566788999999999999999999999999


Q ss_pred             HhhcCC--------CCCChHHHHHHHHHhhchhhccccHHHHHHHHHhhHhHHHHHHHHHHHHHccC
Q 007730          491 QMQVGS--------RYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPS  549 (591)
Q Consensus       491 R~Q~~~--------~y~~~~~~l~~I~r~eGi~GLYrGl~p~llr~~p~~ai~f~~YE~lk~~l~~~  549 (591)
                      |||+..        .|.++++|+++|+++||++|||||+.|++++.+|..++.|.+||.+|.++...
T Consensus       250 rmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~~  316 (320)
T KOG0752|consen  250 RMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRLL  316 (320)
T ss_pred             HHhccCccccccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhcc
Confidence            999976        34689999999999999999999999999999999999999999999887654

>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query591
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-05
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 8e-04
1okc_A 297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 5e-05
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure 
Iteration: 1

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 89/236 (37%), Gaps = 17/236 (7%)
Query: 338 ENKRNQSDKNVVEDENKMEFHSPKT----EKPHLSLAKQEHA------FAGALAGVFVSL 387
           E  R+  +  V   + +M F S +               EHA       AG+  G     
Sbjct: 61  EGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVA 120
Query: 388 CLHPVDTVKTVIQS-----CHTEQKSIVYIGRSIVSERGLTGLYRGXXXXXXXXXXXXXV 442
              P D VK   Q+          +S V   ++I  E G+ GL++G              
Sbjct: 121 VAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCA 180
Query: 443 YAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSERIKQQMQVGS--RYHN 500
              TY+ +K  LL           H T+   A   T+ I +P + +K +    +  +YH+
Sbjct: 181 ELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHS 240
Query: 501 CWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPSLKPGAQP 556
             +  + +++  G  + Y G+     R    ++V F TYE LK+ ++ + +    P
Sbjct: 241 AGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAP 296
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query591
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-41
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-28
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-24
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-40
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-29
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  150 bits (381), Expect = 3e-41
 Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 25/234 (10%)

Query: 376 FAGALAGVFVSLCLHPVDTVKTVIQ--------SCHTEQKSIVYIGRSIVSERGLTGLYR 427
            AG +A       + P++ VK ++Q        S   + K I+     I  E+G    +R
Sbjct: 12  LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 71

Query: 428 GIASNIASSAPISAVYAFTYESVKGALLPHLPK----EFHSLAHCTAGGCASVATSFIFT 483
           G  +N+    P  A+     +  K   L  + +      +   +  +GG A  ATS  F 
Sbjct: 72  GNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAA-GATSLCFV 130

Query: 484 -PSE--RIKQQMQVGS-----RYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVK 535
            P +  R +    VG       +    N +  I K+ GL  LY G+   +   + +    
Sbjct: 131 YPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAY 190

Query: 536 FYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQTQ 589
           F  Y++ K M+          + I + +      + A L + PFD V+ R+  Q
Sbjct: 191 FGVYDTAKGMLPDPK----NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ 240
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query591
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=2.2e-45  Score=380.26  Aligned_cols=254  Identities=21%  Similarity=0.280  Sum_probs=227.6

Q ss_pred             CCCCChhhhhhhhcccc------------cCCChhHHHHHHHhhhcccccccccccccccchhccccccccchhhHHHHH
Q 007730          262 KGQSSCFNAKLMMSTRT------------TKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRH  329 (591)
Q Consensus       262 ~~~~PLD~vKtRmQ~~~------------~~~~~~~~~l~tl~~ig~~~GLyRGl~~~L~~~~~~~~~si~F~~Ye~~k~  329 (591)
                      .+.+|||+||||||++.            .+++..+++..+++++| ++|||||+.+++++..+.+++  +|++||.+|+
T Consensus        17 ~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG-~~glyrG~~~~l~~~~~~~~i--~f~~ye~~k~   93 (303)
T 2lck_A           17 LITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEG-PRSLYNGLVAGLQRQMSFASV--RIGLYDSVKQ   93 (303)
T ss_dssp             HTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHC-HHHHHSSHHHHHHHHHHHHHH--TTTHHHHHHH
T ss_pred             HHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhC-HHHHHcCCHHHHHHHHHHHHH--HHHHHHHHHH
Confidence            45699999999999973            46788999999999999 999999999999999998888  9999999998


Q ss_pred             HhhhhhhhhhhhccCCccchhcchhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHchHHHHHHHHhcCCC-----
Q 007730          330 LMDDDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHT-----  404 (591)
Q Consensus       330 ~l~~~~l~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lAG~~Ag~~s~~v~~Ple~IKtRlQ~~~~-----  404 (591)
                      .+...                           ..    ..+....+++|++||+++.++++|+|+||+|+|++..     
T Consensus        94 ~~~~~---------------------------~~----~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~  142 (303)
T 2lck_A           94 FYTKG---------------------------SE----HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGR  142 (303)
T ss_dssp             HHSCC---------------------------CS----SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSS
T ss_pred             HHhcC---------------------------Cc----CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCC
Confidence            54221                           00    1245678999999999999999999999999999753     


Q ss_pred             CCCCHHHHHHHHHHhcCcccccccchhhhhhccccccchhhhhhhhccccCCCCCcccchhhhhhhhhhhhhhhhhhccc
Q 007730          405 EQKSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTP  484 (591)
Q Consensus       405 ~~~s~~~~ir~I~r~eGi~gLYrGl~~tllr~~p~s~i~f~~Ye~lk~~l~~~~~~~~~~~~~~laG~~Ag~vas~vt~P  484 (591)
                      .|+++++++++|+++||++|||||+.+++++.+|.++++|.+||.+|+.+.............+++|++||++++++++|
T Consensus       143 ~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P  222 (303)
T 2lck_A          143 RYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASP  222 (303)
T ss_dssp             SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCH
Confidence            68999999999999999999999999999999999999999999999988765444455667899999999999999999


Q ss_pred             hhhhhHHhhcCC--CCCChHHHHHHHHHhhchhhccccHHHHHHHHHhhHhHHHHHHHHHHHHHccC
Q 007730          485 SERIKQQMQVGS--RYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESLKQMMLPS  549 (591)
Q Consensus       485 lDvIKtR~Q~~~--~y~~~~~~l~~I~r~eGi~GLYrGl~p~llr~~p~~ai~f~~YE~lk~~l~~~  549 (591)
                      +|+||+|||++.  .|.++++++++|+++||++|||||+.|+++|.+|..+++|.+||.+|+++.+.
T Consensus       223 ~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~  289 (303)
T 2lck_A          223 VDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAA  289 (303)
T ss_dssp             HHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred             HHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence            999999999975  59999999999999999999999999999999999999999999999887643
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 591
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-16
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 9e-14
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 77.4 bits (189), Expect = 3e-16
 Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 25/242 (10%)

Query: 367 LSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQ--------SCHTEQKSIVYIGRSIVS 418
           LS  K     AG +A       + P++ VK ++Q        S   + K I+     I  
Sbjct: 4   LSFLK--DFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPK 61

Query: 419 ERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKE----FHSLAHCTAGGCA 474
           E+G    +RG  +N+    P  A+     +  K   L  + +      +   +  +GG A
Sbjct: 62  EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAA 121

Query: 475 SVATSFIFTPSERIKQQMQV-------GSRYHNCWNALVGIIKNGGLHSLYAGWGAVLCR 527
              +     P +  + ++            +    N +  I K+ GL  LY G+   +  
Sbjct: 122 GATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQG 181

Query: 528 NVPHSIVKFYTYESLKQMMLPSLKPGAQPNTIETLICGGVAGSTAALFTTPFDVVKTRLQ 587
            + +    F  Y++ K M+          + I + +      + A L + PFD V+ R+ 
Sbjct: 182 IIIYRAAYFGVYDTAKGML----PDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM 237

Query: 588 TQ 589
            Q
Sbjct: 238 MQ 239
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query591
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=7.3e-40  Score=332.21  Aligned_cols=249  Identities=15%  Similarity=0.196  Sum_probs=215.6

Q ss_pred             CCCCChhhhhhhhcccc---------cCCChhHHHHHHHhhhcccccccccccccccchhccccccccchhhHHHHHHhh
Q 007730          262 KGQSSCFNAKLMMSTRT---------TKSLLSDYFLKDVSDMKEDCDVTRQPCSSLCADYCINSVASSNGTCEKCRHLMD  332 (591)
Q Consensus       262 ~~~~PLD~vKtRmQ~~~---------~~~~~~~~~l~tl~~ig~~~GLyRGl~~~L~~~~~~~~~si~F~~Ye~~k~~l~  332 (591)
                      .+.+|||+||||+|++.         .+++..+++...++++| .++||||+.+.++...+...+  +|+.|+.+++.+.
T Consensus        22 ~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G-~~~ly~G~~~~l~~~~~~~~~--~~~~~~~~~~~~~   98 (292)
T d1okca_          22 TAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQG-FLSFWRGNLANVIRYFPTQAL--NFAFKDKYKQIFL   98 (292)
T ss_dssp             HHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHC-GGGGGTTTHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred             HHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhh-hhhhhhccchhhhhhhcccch--hHHHHHHHHHHHh
Confidence            44599999999999872         36778888999999988 899999999999999987777  9999999998664


Q ss_pred             hhhhhhhhhccCCccchhcchhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHchHHHHHHHHhcCCC------CC
Q 007730          333 DDALLENKRNQSDKNVVEDENKMEFHSPKTEKPHLSLAKQEHAFAGALAGVFVSLCLHPVDTVKTVIQSCHT------EQ  406 (591)
Q Consensus       333 ~~~l~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lAG~~Ag~~s~~v~~Ple~IKtRlQ~~~~------~~  406 (591)
                      ...                          .............+++|++||+++.++++|+|++|+|+|++..      .+
T Consensus        99 ~~~--------------------------~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~  152 (292)
T d1okca_          99 GGV--------------------------DRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREF  152 (292)
T ss_dssp             TTC--------------------------CTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSC
T ss_pred             ccc--------------------------ccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccccccccc
Confidence            440                          0111223345678899999999999999999999999999743      46


Q ss_pred             CCHHHHHHHHHHhcCcccccccchhhhhhccccccchhhhhhhhccccCCCCCcccchhhhhhhhhhhhhhhhhhccchh
Q 007730          407 KSIVYIGRSIVSERGLTGLYRGIASNIASSAPISAVYAFTYESVKGALLPHLPKEFHSLAHCTAGGCASVATSFIFTPSE  486 (591)
Q Consensus       407 ~s~~~~ir~I~r~eGi~gLYrGl~~tllr~~p~s~i~f~~Ye~lk~~l~~~~~~~~~~~~~~laG~~Ag~vas~vt~PlD  486 (591)
                      .++.+++++++++||+++||+|+.+++++.+++++++|.+||.+|+.+...  ........+++|++++++++++++|+|
T Consensus       153 ~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~a~~~t~P~d  230 (292)
T d1okca_         153 TGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIVSWMIAQTVTAVAGLVSYPFD  230 (292)
T ss_dssp             SSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc--cccchHHHHHHHHHHHHHHhhccccHH
Confidence            789999999999999999999999999999999999999999999877543  334567788999999999999999999


Q ss_pred             hhhHHhhcCC-------CCCChHHHHHHHHHhhchhhccccHHHHHHHHHhhHhHHHHHHHHH
Q 007730          487 RIKQQMQVGS-------RYHNCWNALVGIIKNGGLHSLYAGWGAVLCRNVPHSIVKFYTYESL  542 (591)
Q Consensus       487 vIKtR~Q~~~-------~y~~~~~~l~~I~r~eGi~GLYrGl~p~llr~~p~~ai~f~~YE~l  542 (591)
                      |||+|||.+.       .|.++++++++|+++||++|||||+.|+++|.++ +++.|.+||.+
T Consensus       231 vvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         231 TVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            9999999864       5889999999999999999999999999999765 68899999963
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure