Citrus Sinensis ID: 007737

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-
MIFHKLSLVFPLLCLCFTSLLTRVDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSRLTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGEFTVIAVEMQ
ccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHccccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccEEEccccccHHcccccccccccccccccccHHHHHHHccHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHcccccEEEcccHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHccEEccccccccccccccccEEEEEcccccccccccccccccccccccHHHHHHHHcccEEEcccccccccccHHHHHHHHHHHcccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccEEEEcccccHHHHHHHHHHHHcccccccccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccEccccccccccccccccHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEEEEcccccccccccEEcEEEcHHHHHHHccHHHHHHHHHcccHHHHHHHHccccccccccHHHHHHHHHHHccccEEEEccHHHHHHHHHcccccccHHHHHHHHHHccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcccHHHHHHHHHHHHccEEEEEcccccccccHccccEEEEEccccccHHHHcccccccccccccHHHHHHHHccccEEcccccccccccccHHHHHHHHHcccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHccccEEEEEEcccccccHHHcccccccEEEEEcccccHHHHHHHHHHHcccccccccEEEEccc
mifhklslVFPLLCLCFTslltrvdstqppfscdpsnpstetfpfckttlpisQRARDLVSRLTLDEKISQLVnsapaiprlgipayEWWSEALHgvagvgkgiffngtirgatsfpQVILTAASFDSYLWYRIGQAIGLEARALYNAGQaigmtfwapninifrdprwgrgqetpgedplvtgkYAVSYVrgvqgdtfnggklkgklQASACCKhftaydldnwkgttrykfdARVTMQDladtyqppfescvkqgrasgIMCAynrvngipscadrnllsktarrqwgfhgyitsdcdAVSIIYdaegyakspeDAVVDVLKAgmdvncgsfLQKHTKAAVkqkklpesEIDRALHNLFSVRMRlglfngnptmqpfgkigadvvcspAHQVLALQAAQDGIVLLknshgllplpksksvslaligpnanSAKTLlgnyagpscrsitplqALQNYVentvyypgcdtvacssasIDKAVDIAKGADHVVLMMGldqtqekeeldrvdlvlpgrQQELITRVAEAAKKPVILVLLCggpvditfakydrNIGSilwagypgeaGAVALAEVifgdhnpgeFTVIAVEMQ
MIFHKLSLVFPLLCLCFTSLLTRVDStqppfscdpsnpsTETFPFCKTTLPISQRARDLVSRLTLDEKIsqlvnsapaiprLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFtaydldnwkgTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAavkqkklpeseIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGEFTVIAVEMQ
MIFHKLSLVFPLLCLCFTSLLTRVDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSRLTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGllplpksksvslalIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGEFTVIAVEMQ
*IFHKLSLVFPLLCLCFTSLLTRVD*****************FPFCKTTLPISQRARDLVSRLTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQ****EDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAV********EIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQT****ELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGEFTVIAV***
*****LS*VFPLLCLCFTSLLTRVDSTQPPFSC****PSTETFPFCKTTLPISQRARDLVSRLTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGEFTVIAVE**
MIFHKLSLVFPLLCLCFTSLLTRVDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSRLTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQK*********KLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGEFTVIAVEMQ
*IFHKLSLVFPLLCLCFTSLLTRVDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSRLTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGEFTVIAVEMQ
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIFHKLSLVFPLLCLCFTSLLTRVDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSRLTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGEFTVIAVEMQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query591 2.2.26 [Sep-21-2011]
Q9SGZ5 767 Probable beta-D-xylosidas yes no 0.944 0.727 0.749 0.0
Q9LJN4 781 Probable beta-D-xylosidas no no 0.959 0.725 0.561 0.0
Q9LXA8 792 Probable beta-D-xylosidas no no 0.950 0.709 0.556 0.0
Q94KD8 768 Probable beta-D-xylosidas no no 0.967 0.744 0.536 0.0
Q9FGY1 774 Beta-D-xylosidase 1 OS=Ar no no 0.945 0.722 0.540 1e-180
Q9LXD6 773 Beta-D-xylosidase 3 OS=Ar no no 0.950 0.727 0.548 1e-180
Q9FLG1 784 Beta-D-xylosidase 4 OS=Ar no no 0.952 0.718 0.545 1e-180
A5JTQ3 774 Beta-xylosidase/alpha-L-a N/A no 0.959 0.732 0.519 1e-175
A5JTQ2 774 Beta-xylosidase/alpha-L-a N/A no 0.966 0.737 0.509 1e-170
Q0CB82 765 Probable exo-1,4-beta-xyl N/A no 0.937 0.724 0.408 1e-112
>sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2 Back     alignment and function desciption
 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/559 (74%), Positives = 489/559 (87%), Gaps = 1/559 (0%)

Query: 24  VDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSRLTLDEKISQLVNSAPAIPRLG 83
           V+S  PP SCDPSNP+T+ + FC+T LPI +RARDLVSRLT+DEKISQLVN+AP IPRLG
Sbjct: 17  VESAPPPHSCDPSNPTTKLYQFCRTDLPIGKRARDLVSRLTIDEKISQLVNTAPGIPRLG 76

Query: 84  IPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEAR 143
           +PAYEWWSEALHGVA  G GI FNGT++ ATSFPQVILTAASFDSY W+RI Q IG EAR
Sbjct: 77  VPAYEWWSEALHGVAYAGPGIRFNGTVKAATSFPQVILTAASFDSYEWFRIAQVIGKEAR 136

Query: 144 ALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGK 203
            +YNAGQA GMTFWAPNINIFRDPRWGRGQETPGEDP++TG YAV+YVRG+QGD+F+G K
Sbjct: 137 GVYNAGQANGMTFWAPNINIFRDPRWGRGQETPGEDPMMTGTYAVAYVRGLQGDSFDGRK 196

Query: 204 -LKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGI 262
            L   LQASACCKHFTAYDLD WKG TRY F+A+V++ DLA+TYQPPF+ C+++GRASGI
Sbjct: 197 TLSNHLQASACCKHFTAYDLDRWKGITRYVFNAQVSLADLAETYQPPFKKCIEEGRASGI 256

Query: 263 MCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDV 322
           MCAYNRVNGIPSCAD NLL++TAR QW F GYITSDCDAVSIIYDA+GYAKSPEDAV DV
Sbjct: 257 MCAYNRVNGIPSCADPNLLTRTARGQWAFRGYITSDCDAVSIIYDAQGYAKSPEDAVADV 316

Query: 323 LKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKI 382
           LKAGMDVNCGS+LQKHTK+A++QKK+ E++IDRAL NLFSVR+RLGLFNG+PT  P+G I
Sbjct: 317 LKAGMDVNCGSYLQKHTKSALQQKKVSETDIDRALLNLFSVRIRLGLFNGDPTKLPYGNI 376

Query: 383 GADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLLGNYA 442
             + VCSPAHQ LAL AA++GIVLLKN+  LLP  K    SLA+IGPNA+  KTLLGNYA
Sbjct: 377 SPNEVCSPAHQALALDAARNGIVLLKNNLKLLPFSKRSVSSLAVIGPNAHVVKTLLGNYA 436

Query: 443 GPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADHVVLMMGLDQTQE 502
           GP C+++TPL AL++YV+N VY+ GCD+VACS+A+ID+AV IAK ADHVVL+MGLDQTQE
Sbjct: 437 GPPCKTVTPLDALRSYVKNAVYHQGCDSVACSNAAIDQAVAIAKNADHVVLIMGLDQTQE 496

Query: 503 KEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYP 562
           KE+ DRVDL LPG+QQELIT VA AAKKPV+LVL+CGGPVDI+FA  +  IGSI+WAGYP
Sbjct: 497 KEDFDRVDLSLPGKQQELITSVANAAKKPVVLVLICGGPVDISFAANNNKIGSIIWAGYP 556

Query: 563 GEAGAVALAEVIFGDHNPG 581
           GEAG +A++E+IFGDHNPG
Sbjct: 557 GEAGGIAISEIIFGDHNPG 575

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 Back     alignment and function description
>sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 Back     alignment and function description
>sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 Back     alignment and function description
>sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 Back     alignment and function description
>sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia GN=Xyl1 PE=1 SV=1 Back     alignment and function description
>sp|Q0CB82|BXLB_ASPTN Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=bxlB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query591
255545664 774 Periplasmic beta-glucosidase precursor, 0.967 0.739 0.818 0.0
224066931 773 predicted protein [Populus trichocarpa] 0.945 0.723 0.819 0.0
224082152 745 predicted protein [Populus trichocarpa] 0.956 0.758 0.807 0.0
224066929 742 predicted protein [Populus trichocarpa] 0.976 0.777 0.757 0.0
302141935 1411 unnamed protein product [Vitis vinifera] 0.978 0.409 0.769 0.0
225459350 774 PREDICTED: probable beta-D-xylosidase 7- 0.978 0.746 0.769 0.0
15218202 767 putative beta-D-xylosidase 7 [Arabidopsi 0.944 0.727 0.749 0.0
297842585 766 glycosyl hydrolase family 3 protein [Ara 0.944 0.728 0.747 0.0
449465962 783 PREDICTED: probable beta-D-xylosidase 7- 0.978 0.738 0.724 0.0
449508468 783 PREDICTED: LOW QUALITY PROTEIN: probable 0.978 0.738 0.724 0.0
>gi|255545664|ref|XP_002513892.1| Periplasmic beta-glucosidase precursor, putative [Ricinus communis] gi|223546978|gb|EEF48475.1| Periplasmic beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1006 bits (2600), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/579 (81%), Positives = 520/579 (89%), Gaps = 7/579 (1%)

Query: 3   FHKLSLVFPLLCLCFTSLLTRVDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSR 62
           F     +FPLL L       ++ ST+PPFSCDPSNPST +F FCKT+LPISQR RDLVSR
Sbjct: 8   FFTFFTIFPLLIL-------QITSTEPPFSCDPSNPSTSSFLFCKTSLPISQRVRDLVSR 60

Query: 63  LTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILT 122
           LTLDEKISQLV+SAP+IPRLGIPAYEWWSEALHGVA VG+GI F G I+ ATSFPQVILT
Sbjct: 61  LTLDEKISQLVSSAPSIPRLGIPAYEWWSEALHGVANVGRGIHFEGAIKAATSFPQVILT 120

Query: 123 AASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLV 182
           AASFD+Y WYRIGQ IG EARA+YNAGQA GMTFWAPNINIFRDPRWGRGQETPGEDPLV
Sbjct: 121 AASFDAYQWYRIGQVIGREARAVYNAGQATGMTFWAPNINIFRDPRWGRGQETPGEDPLV 180

Query: 183 TGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDL 242
           TGKYAVSYVRGVQGD+F GGKLKG LQASACCKHFTAYDLDNWKG  R+ FDARVTMQDL
Sbjct: 181 TGKYAVSYVRGVQGDSFQGGKLKGHLQASACCKHFTAYDLDNWKGVNRFVFDARVTMQDL 240

Query: 243 ADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAV 302
           ADTYQPPF+SCV+QG+ASGIMCAYNRVNGIPSCAD NLLS+TAR QW FHGYI SDCDAV
Sbjct: 241 ADTYQPPFQSCVQQGKASGIMCAYNRVNGIPSCADFNLLSRTARGQWDFHGYIASDCDAV 300

Query: 303 SIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHNLFS 362
           SIIYD +GYAKSPEDAVVDVLKAGMDVNCGS+LQKHTKAAV+QKKLPE+ IDRALHNLFS
Sbjct: 301 SIIYDNQGYAKSPEDAVVDVLKAGMDVNCGSYLQKHTKAAVEQKKLPEASIDRALHNLFS 360

Query: 363 VRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSV 422
           VRMRLGLFNGNPT QPF  IG D VCS  HQ+LAL+AA++GIVLLKNS  LLPL KSK+V
Sbjct: 361 VRMRLGLFNGNPTEQPFSNIGPDQVCSQEHQILALEAARNGIVLLKNSARLLPLQKSKTV 420

Query: 423 SLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAV 482
           SLA+IGPNANS +TLLGNYAGP C+++TPLQALQ YV+NT+YY GCDTV CSSASIDKAV
Sbjct: 421 SLAVIGPNANSVQTLLGNYAGPPCKTVTPLQALQYYVKNTIYYSGCDTVKCSSASIDKAV 480

Query: 483 DIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPV 542
           DIAKG D VV++MGLDQTQE+EELDR+DLVLPG+QQELIT VA++AK P++LVLL GGPV
Sbjct: 481 DIAKGVDRVVMIMGLDQTQEREELDRLDLVLPGKQQELITNVAKSAKNPIVLVLLSGGPV 540

Query: 543 DITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPG 581
           DI+FAKYD NIGSILWAGYPGEAG +ALAE+IFGDHNPG
Sbjct: 541 DISFAKYDENIGSILWAGYPGEAGGIALAEIIFGDHNPG 579

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224066931|ref|XP_002302285.1| predicted protein [Populus trichocarpa] gi|222844011|gb|EEE81558.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224082152|ref|XP_002306583.1| predicted protein [Populus trichocarpa] gi|222856032|gb|EEE93579.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224066929|ref|XP_002302284.1| predicted protein [Populus trichocarpa] gi|222844010|gb|EEE81557.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|302141935|emb|CBI19138.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225459350|ref|XP_002285805.1| PREDICTED: probable beta-D-xylosidase 7-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|15218202|ref|NP_177929.1| putative beta-D-xylosidase 7 [Arabidopsis thaliana] gi|259585708|sp|Q9SGZ5.2|BXL7_ARATH RecName: Full=Probable beta-D-xylosidase 7; Short=AtBXL7; Flags: Precursor gi|18086336|gb|AAL57631.1| At1g78060/F28K19_32 [Arabidopsis thaliana] gi|332197942|gb|AEE36063.1| putative beta-D-xylosidase 7 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297842585|ref|XP_002889174.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp. lyrata] gi|297335015|gb|EFH65433.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449465962|ref|XP_004150696.1| PREDICTED: probable beta-D-xylosidase 7-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449508468|ref|XP_004163321.1| PREDICTED: LOW QUALITY PROTEIN: probable beta-D-xylosidase 7-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query591
TAIR|locus:2029391 767 AT1G78060 [Arabidopsis thalian 0.964 0.743 0.726 1.7e-233
TAIR|locus:2091236 781 AT3G19620 [Arabidopsis thalian 0.959 0.725 0.549 1.5e-170
TAIR|locus:2196060 768 BXL2 "beta-xylosidase 2" [Arab 0.966 0.743 0.531 8.2e-170
TAIR|locus:2142434 792 AT5G10560 [Arabidopsis thalian 0.966 0.720 0.536 1.3e-169
TAIR|locus:2157994 774 BXL1 "beta-xylosidase 1" [Arab 0.945 0.722 0.533 1e-164
TAIR|locus:2174809 784 XYL4 "beta-D-xylosidase 4" [Ar 0.961 0.724 0.536 2.4e-163
TAIR|locus:2144756 773 BXL3 "AT5G09730" [Arabidopsis 0.950 0.727 0.539 5.7e-162
ASPGD|ASPL0000029139 763 bxlB [Emericella nidulans (tax 0.898 0.695 0.395 1.5e-99
UNIPROTKB|Q5ATH9 763 bxlB "Exo-1,4-beta-xylosidase 0.898 0.695 0.395 1.5e-99
ASPGD|ASPL0000048081 803 xlnD [Emericella nidulans (tax 0.923 0.679 0.354 3.6e-89
TAIR|locus:2029391 AT1G78060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2252 (797.8 bits), Expect = 1.7e-233, P = 1.7e-233
 Identities = 415/571 (72%), Positives = 486/571 (85%)

Query:    12 LLCLCFTSLLTRVDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSRLTLDEKISQ 71
             LL L    ++  V+S  PP SCDPSNP+T+ + FC+T LPI +RARDLVSRLT+DEKISQ
Sbjct:     5 LLLLLLLFIVHGVESAPPPHSCDPSNPTTKLYQFCRTDLPIGKRARDLVSRLTIDEKISQ 64

Query:    72 LVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLW 131
             LVN+AP IPRLG+PAYEWWSEALHGVA  G GI FNGT++ ATSFPQVILTAASFDSY W
Sbjct:    65 LVNTAPGIPRLGVPAYEWWSEALHGVAYAGPGIRFNGTVKAATSFPQVILTAASFDSYEW 124

Query:   132 YRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYV 191
             +RI Q IG EAR +YNAGQA GMTFWAPNINIFRDPRWGRGQETPGEDP++TG YAV+YV
Sbjct:   125 FRIAQVIGKEARGVYNAGQANGMTFWAPNINIFRDPRWGRGQETPGEDPMMTGTYAVAYV 184

Query:   192 RGVQGDTFNGGK-LKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPF 250
             RG+QGD+F+G K L   LQASACCKHFTAYDLD WKG TRY F+A+V++ DLA+TYQPPF
Sbjct:   185 RGLQGDSFDGRKTLSNHLQASACCKHFTAYDLDRWKGITRYVFNAQVSLADLAETYQPPF 244

Query:   251 ESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEG 310
             + C+++GRASGIMCAYNRVNGIPSCAD NLL++TAR QW F GYITSDCDAVSIIYDA+G
Sbjct:   245 KKCIEEGRASGIMCAYNRVNGIPSCADPNLLTRTARGQWAFRGYITSDCDAVSIIYDAQG 304

Query:   311 YAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLF 370
             YAKSPEDAV DVLKAGMDVNCGS+LQKHTK+A++QKK+ E++IDRAL NLFSVR+RLGLF
Sbjct:   305 YAKSPEDAVADVLKAGMDVNCGSYLQKHTKSALQQKKVSETDIDRALLNLFSVRIRLGLF 364

Query:   371 NGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGXXXXXXXXXXXXXXIGPN 430
             NG+PT  P+G I  + VCSPAHQ LAL AA++GIVLLKN+                IGPN
Sbjct:   365 NGDPTKLPYGNISPNEVCSPAHQALALDAARNGIVLLKNNLKLLPFSKRSVSSLAVIGPN 424

Query:   431 ANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACSSASIDKAVDIAKGADH 490
             A+  KTLLGNYAGP C+++TPL AL++YV+N VY+ GCD+VACS+A+ID+AV IAK ADH
Sbjct:   425 AHVVKTLLGNYAGPPCKTVTPLDALRSYVKNAVYHQGCDSVACSNAAIDQAVAIAKNADH 484

Query:   491 VVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYD 550
             VVL+MGLDQTQEKE+ DRVDL LPG+QQELIT VA AAKKPV+LVL+CGGPVDI+FA  +
Sbjct:   485 VVLIMGLDQTQEKEDFDRVDLSLPGKQQELITSVANAAKKPVVLVLICGGPVDISFAANN 544

Query:   551 RNIGSILWAGYPGEAGAVALAEVIFGDHNPG 581
               IGSI+WAGYPGEAG +A++E+IFGDHNPG
Sbjct:   545 NKIGSIIWAGYPGEAGGIAISEIIFGDHNPG 575
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0010075 "regulation of meristem growth" evidence=RCA
TAIR|locus:2091236 AT3G19620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196060 BXL2 "beta-xylosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142434 AT5G10560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157994 BXL1 "beta-xylosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174809 XYL4 "beta-D-xylosidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144756 BXL3 "AT5G09730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029139 bxlB [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ATH9 bxlB "Exo-1,4-beta-xylosidase bxlB" [Aspergillus nidulans FGSC A4 (taxid:227321)] Back     alignment and assigned GO terms
ASPGD|ASPL0000048081 xlnD [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SGZ5BXL7_ARATH3, ., 2, ., 1, ., -0.74950.94410.7275yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.370.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00020870
hypothetical protein (773 aa)
(Populus trichocarpa)
Predicted Functional Partners:
grail3.3327000301
Predicted protein (63 aa)
  •     0.470
fgenesh4_pg.C_LG_IX000155
hypothetical protein (242 aa)
  •     0.460

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query591
PLN03080 779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 0.0
PRK15098 765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 9e-70
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 1e-69
COG1472397 COG1472, BglX, Beta-glucosidase-related glycosidas 3e-58
pfam01915221 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam 8e-50
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information 
 Score =  804 bits (2079), Expect = 0.0
 Identities = 334/583 (57%), Positives = 425/583 (72%), Gaps = 9/583 (1%)

Query: 4   HKLSLVFPLLCLCFTSLLTRVDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSRL 63
            +L  +F LL L       +     P F C P  P+   +PFC  +LPI  RAR LVS L
Sbjct: 3   TQLRPLFLLLFLLALGATFKAADAHPQFPCKP--PTFSAYPFCNASLPIPARARSLVSLL 60

Query: 64  TLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFN-GTIRGATSFPQVILT 122
           TLDEKI+QL N+A  +PRLGIP YEWWSE+LHG+A  G G+ FN G +  ATSFPQVIL+
Sbjct: 61  TLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNGPGVSFNSGPVSAATSFPQVILS 120

Query: 123 AASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLV 182
           AASF+  LW  IG AI +EARA+YNAGQA G+TFWAPNINIFRDPRWGRGQETPGEDP V
Sbjct: 121 AASFNRSLWRAIGSAIAVEARAMYNAGQA-GLTFWAPNINIFRDPRWGRGQETPGEDPAV 179

Query: 183 TGKYAVSYVRGVQGDTFNGGK---LKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTM 239
              Y+V +V+G QG  +   +     GKL  SACCKH+TAYDL+ W   +RY F+A VT 
Sbjct: 180 ASAYSVEFVKGFQGGKWKKVRDDGEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTE 239

Query: 240 QDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDC 299
           QD+ DTYQPPF+SC+++G+AS +MC+YN+VNG+P+CA ++LL K AR +WGF GYITSDC
Sbjct: 240 QDMEDTYQPPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQK-ARDEWGFQGYITSDC 298

Query: 300 DAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHN 359
           DAV+ I++ + Y KSPEDAV DVLKAGMD+NCGS++ +HT++A+++ K+ E +IDRAL N
Sbjct: 299 DAVATIFEYQTYTKSPEDAVADVLKAGMDINCGSYMLRHTQSAIEKGKVQEEDIDRALFN 358

Query: 360 LFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKS 419
           LFSV++RLGLF+G+P    +GK+G + VC+  H+ LAL+AA+ GIVLLKN    LPL KS
Sbjct: 359 LFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLKNDKKFLPLNKS 418

Query: 420 KSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVAC-SSASI 478
           +  SLA+IGP AN    L G+Y G  C+  T  + LQ YV+ T +  GC  V+C S    
Sbjct: 419 EVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGF 478

Query: 479 DKAVDIAKGADHVVLMMGLDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLC 538
            +A+ IAK AD VV++ GLD +QE E+ DRV L+LPG+Q +LI+ VA  +KKPV+LVL  
Sbjct: 479 GEAIAIAKRADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTG 538

Query: 539 GGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPG 581
           GGPVD++FAK D  I SILW GYPGE G  ALAE+IFGD+NPG
Sbjct: 539 GGPVDVSFAKQDPRIASILWIGYPGEVGGQALAEIIFGDYNPG 581

Length = 779
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information
>gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 591
PLN03080 779 Probable beta-xylosidase; Provisional 100.0
PRK15098 765 beta-D-glucoside glucohydrolase; Provisional 100.0
COG1472397 BglX Beta-glucosidase-related glycosidases [Carboh 100.0
PF00933299 Glyco_hydro_3: Glycosyl hydrolase family 3 N termi 100.0
PRK05337337 beta-hexosaminidase; Provisional 100.0
PF01915227 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter 99.97
>PLN03080 Probable beta-xylosidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.5e-121  Score=1041.52  Aligned_cols=563  Identities=58%  Similarity=1.048  Sum_probs=506.2

Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhcCCHHHHHHhhhcCCCCCCCCCCCchhhhhhhccccccCCC
Q 007737           23 RVDSTQPPFSCDPSNPSTETFPFCKTTLPISQRARDLVSRLTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVAGVGK  102 (591)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ll~~mtleEKv~ql~~~~~~~~~~gip~~~~~~~~~~gv~~~g~  102 (591)
                      ......++++|++  .+....||||+++++++|+++||++||+|||++||.....+++|+|||.+.||+|++||++..++
T Consensus        22 ~~~~~~~~~~c~~--~~~~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP~~~~~~d~~hGv~~~~~   99 (779)
T PLN03080         22 KAADAHPQFPCKP--PTFSAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNGP   99 (779)
T ss_pred             ccccCCCCcCCCC--ccccCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCCccceecccccccccCCC
Confidence            3344467889975  45566899999999999999999999999999999988889999999999999999999998888


Q ss_pred             ccccc-CccCCCccCchHHHHHhcCCHHHHHHHHHHHHHHHHHhhhccccccceeeceeeccCCCCCCCccCCCCCCChH
Q 007737          103 GIFFN-GTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPL  181 (591)
Q Consensus       103 g~~~~-~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~e~~a~~~~~~~~Gi~~~aPv~dv~~~p~~gr~~rsfgeDp~  181 (591)
                      |+++. +.+.++|.||.++++|||||+++++++|+++|+|+|++++.++. |+++|+|++||.|||+|||++|||||||+
T Consensus       100 g~~~~~g~~~~aT~FP~~i~laAt~d~~L~~~~g~~ig~E~ra~g~~~~~-G~~~~aP~vdi~rdPrwGR~~EtfGEDP~  178 (779)
T PLN03080        100 GVSFNSGPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQA-GLTFWAPNINIFRDPRWGRGQETPGEDPA  178 (779)
T ss_pred             ccccccCCCCCceECchHHhhhhcCCHHHHHHHHHHHHHHHHhhcccccc-CcceeecccccccCCCcCccccCcCCCHH
Confidence            88774 34567899999999999999999999999999999999776666 88889999999999999999999999999


Q ss_pred             HHHHHHHHHhchhccCcCCC----CCCCCCCceeeeeccccccCCCCCCCCcccccccccCHHHHHhhcCchHHHHHhcC
Q 007737          182 VTGKYAVSYVRGVQGDTFNG----GKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQG  257 (591)
Q Consensus       182 lv~~~a~a~v~G~q~~~g~~----~~~~~~~~v~a~~KHFpg~g~~~~~~~~~~~~~~~~~~~~l~~~~l~pF~~ai~~g  257 (591)
                      ++++|+.|||+|+|+. +..    +.+.++.+|++|+||||||+++.+.+..|...++.+++++|+|+||+||+++|++|
T Consensus       179 lv~~~a~a~V~GlQ~~-~~~~~~~~~~~~~~~V~a~~KHF~g~~~e~~~~~~r~~~~~~v~~~~L~e~yl~PF~~ai~~g  257 (779)
T PLN03080        179 VASAYSVEFVKGFQGG-KWKKVRDDGEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQPPFKSCIQEG  257 (779)
T ss_pred             HHHHHHHHHHHHhcCC-CcccccccccCCCceEEEECCeeeCCCccccCCccccCccCccCHHHHHhhhhHHHHHHHHhc
Confidence            9999999999999975 100    00113345999999999999987777788888889999999999999999999999


Q ss_pred             CccEEEeeccccCCcccccCHHHHHHHHhhhcCcceEEEccchhhHhhhccccccCCHHHHHHHHHHcCCCccCcchhHH
Q 007737          258 RASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQK  337 (591)
Q Consensus       258 ~~~~vM~s~~~v~g~pa~~s~~~l~~lLR~~~gf~G~visD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~l~~~~~~  337 (591)
                      .+++||||||.+||+|+|.|+++|++ ||+||||+|+|||||++|..+...++|..+.+|++++||+||+||+|...+.+
T Consensus       258 ~~~~VM~sYn~vnG~Pa~~s~~lL~~-LR~ewGF~G~VvSD~~a~~~~~~~~~~~~~~~ea~~~Al~AG~Dl~~~~~~~~  336 (779)
T PLN03080        258 KASCLMCSYNQVNGVPACARKDLLQK-ARDEWGFQGYITSDCDAVATIFEYQTYTKSPEDAVADVLKAGMDINCGSYMLR  336 (779)
T ss_pred             CCeEEEeCCcCcCCccccCCHHHHHH-HHHHhCcCCeEecchHHHHHhhhcccccCCHHHHHHHHHHcCCCcccCchhHH
Confidence            88899999999999999999999986 99999999999999999999988778877899999999999999999887788


Q ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCHHHHHHHHHHHhhcceecccCCCCCCCC
Q 007737          338 HTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLP  417 (591)
Q Consensus       338 ~l~~av~~g~i~~~~i~~av~ril~~k~~~gl~~~~p~~~~~~~~~~~~~~~~~~~~la~e~a~~SivLLKN~~~~LPL~  417 (591)
                      .+.+||++|++++++||+||+|||++|+++|+|+++|...+|.++....+++++|+++++|+|++|||||||++++|||+
T Consensus       337 ~l~~av~~G~i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~~~~v~~~~h~~lA~eaA~~siVLLKN~~~~LPL~  416 (779)
T PLN03080        337 HTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLKNDKKFLPLN  416 (779)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcCCCcccccccccccccCCHHHHHHHHHHHHhCEEEEecCCCCCCCC
Confidence            99999999999999999999999999999999995443334555556678899999999999999999999999999998


Q ss_pred             CCCCceEEEEccCCcccccccCCCCCCCCCcCCHHHHHHhhhhcceecCCCCcccCC-cccHHHHHHHhhcCCEEEEEee
Q 007737          418 KSKSVSLALIGPNANSAKTLLGNYAGPSCRSITPLQALQNYVENTVYYPGCDTVACS-SASIDKAVDIAKGADHVVLMMG  496 (591)
Q Consensus       418 ~~~~~kv~viGp~a~~~~~~~g~~sg~~~~~~t~~~~l~~~~~~v~~~~g~~~~~~~-~~~~~~~~~~a~~aD~vIv~~g  496 (591)
                      +.+.+||+||||+++....++|+|++.+++..+++++|+++..++.|..||....+. +..+++++++|++||+|||++|
T Consensus       417 ~~~~~~IaViGp~A~~~~~~~g~~~~~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~A~~~A~~aD~vIv~~G  496 (779)
T PLN03080        417 KSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKRADFVVVVAG  496 (779)
T ss_pred             CCCCCEEEEECCCCCCcCcCCCCCCCCCCCCCCHHHHHHHHhhcceeccCccccccCchhhHHHHHHHhccCCEEEEEeC
Confidence            765679999999999988888889998888999999999988778899998655432 3568899999999999999999


Q ss_pred             cCCCCccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeCCCeeeeccccccCCcceEEEccCCChhHHHHHHHHHhc
Q 007737          497 LDQTQEKEELDRVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFG  576 (591)
Q Consensus       497 ~~~~~~~Eg~Dr~~l~l~~~q~~li~~v~~~~~kpvIvV~~~~~P~dl~~~~~~~~v~Ail~~~~~g~~~g~AladvL~G  576 (591)
                      .+...++|+.||.+|.||+.|.+||++|++.+++|||||+++|+||+|+|+.+.++++|||++|||||++|+|+||||||
T Consensus       497 ~~~~~e~E~~Dr~~l~Lp~~Q~~LI~~va~~~~~pvIvVl~~g~Pv~l~~~~~~~~v~AIl~~~ypGqegG~AiAdvLfG  576 (779)
T PLN03080        497 LDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQALAEIIFG  576 (779)
T ss_pred             CCccccccCCCcccccCCccHHHHHHHHHhhcCCCEEEEEeCCceeeccchhccCCCCeEEEccCCcccchhhhHHHHcC
Confidence            98888999999999999999999999999864568999999999999999876778999999999999999999999999


Q ss_pred             CCCCCccCcccc-cC
Q 007737          577 DHNPGEFTVIAV-EM  590 (591)
Q Consensus       577 ~~nPsGkLP~t~-p~  590 (591)
                      ++|||||||+|| |+
T Consensus       577 ~vnPsGkLPvT~~p~  591 (779)
T PLN03080        577 DYNPGGRLPMTWYPE  591 (779)
T ss_pred             CCCCCCcCeeeeccc
Confidence            999999999998 64

>PRK15098 beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK05337 beta-hexosaminidase; Provisional Back     alignment and domain information
>PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query591
4i3g_A 829 Crystal Structure Of Desr, A Beta-glucosidase From 6e-38
4i3g_A 829 Crystal Structure Of Desr, A Beta-glucosidase From 3e-06
1ex1_A605 Beta-D-Glucan Exohydrolase From Barley Length = 605 1e-28
1lq2_A602 Crystal Structure Of Barley Beta-D-Glucan Glucohydr 1e-28
2x40_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 2e-28
2x42_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 2e-27
3usz_A 822 Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc 3e-26
3rrx_A 822 Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet 3e-26
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 1e-20
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 2e-05
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 7e-19
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 4e-05
3zyz_A 713 Crystal Structure Of A Glycoside Hydrolase Family 3 1e-17
4i8d_A 714 Crystal Structure Of Beta-D-Glucoside Glucohydrolas 1e-17
3bmx_A642 Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis 2e-06
3lk6_A616 Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) Fro 6e-06
4gyj_A648 Crystal Structure Of Mutant (D318n) Bacillus Subtil 7e-06
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure 
Iteration: 1

 Score =  155 bits (392), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 179/396 (45%), Gaps = 62/396 (15%)
Query: 53  SQRARDLVSRLTLDEKIS----------QLVNSAPAIPRLGIPAYEWWSEALHGVAGVGK 102
           + RA +LV+++TLDEKIS          Q V   P +PRLGIP     ++  +G+  VG+
Sbjct: 51  TSRAAELVAQMTLDEKISFVHWALDPDRQNVGYLPGVPRLGIPELRA-ADGPNGIRLVGQ 109
Query: 103 GIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNIN 162
                     AT+ P  +  A++FD  +    G+ +G + RAL N    +G     P +N
Sbjct: 110 T---------ATALPAPVALASTFDDTMADSYGKVMGRDGRAL-NQDMVLG-----PMMN 154
Query: 163 IFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDL 222
             R P  GR  ET  EDPLV+ + AV+ ++G+QG                  KHF A + 
Sbjct: 155 NIRVPHGGRNYETFSEDPLVSSRTAVAQIKGIQGAGL-----------MTTAKHFAANNQ 203
Query: 223 DNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLS 282
           +N     R+  +A V  Q L +   P FE+  K G AS  MCAYN +NG PSC +  LL+
Sbjct: 204 EN----NRFSVNANVDEQTLREIEFPAFEASSKAGAAS-FMCAYNGLNGKPSCGNDELLN 258
Query: 283 KTARRQWGFHGYITSD------CDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQ 336
              R QWGF G++ SD       DA++   D E   + P D     +  G       F  
Sbjct: 259 NVLRTQWGFQGWVMSDWLATPGTDAITKGLDQEMGVELPGD-----VPKGEPSPPAKFFG 313
Query: 337 KHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQP-FGKIGADVVCSPAHQVL 395
           +  K AV    +PE+ + R+   +     + GL    P  +P   K GA        Q +
Sbjct: 314 EALKTAVLNGTVPEAAVTRSAERIVGQMEKFGLLLATPAPRPERDKAGA--------QAV 365
Query: 396 ALQAAQDGIVLLKNSHGXXXXXXXXXXXXXXIGPNA 431
           + + A++G VLL+N                 IGP A
Sbjct: 366 SRKVAENGAVLLRNEGQALPLAGDAGKSIAVIGPTA 401
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 Back     alignment and structure
>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 Back     alignment and structure
>pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 Back     alignment and structure
>pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 Back     alignment and structure
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 Back     alignment and structure
>pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 Back     alignment and structure
>pdb|3BMX|A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis Length = 642 Back     alignment and structure
>pdb|3LK6|A Chain A, Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) From Bacillus Subtilis Length = 616 Back     alignment and structure
>pdb|4GYJ|A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) Length = 648 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query591
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 1e-138
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 1e-134
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 1e-128
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 1e-110
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 4e-25
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 2e-41
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 2e-26
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 2e-08
4g6c_A342 Beta-hexosaminidase 1; ssgcid, niaid, structural g 3e-04
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
 Score =  417 bits (1075), Expect = e-138
 Identities = 138/592 (23%), Positives = 232/592 (39%), Gaps = 117/592 (19%)

Query: 54  QRARDLVSRLTLDEKISQL-------------------VNSAPAIPRLGIPAYEWWSEAL 94
           ++  +++S+LTL+EK+  +                         +PR+G+PA+   ++  
Sbjct: 2   EKVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGP 60

Query: 95  HGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGM 154
            G+           T    T+FP  I+ A++++  L   +G+A+G E R        + +
Sbjct: 61  AGLRINPTRENDENTY-YTTAFPVEIMLASTWNRELLEEVGKAMGEEVRE-----YGVDV 114

Query: 155 TFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACC 214
              AP +NI R+P  GR  E   EDP+++G+ A S+V+GVQ                AC 
Sbjct: 115 LL-APAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-----------GVGACI 162

Query: 215 KHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPS 274
           KHF A + +    T R   D  V+ + L + Y   FE  VK+ +   +M AYN++NG   
Sbjct: 163 KHFVANNQE----TNRMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYC 218

Query: 275 CADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGS- 333
             +  LL K  R +WGF G++ SD  A               D  V+ LKAG D+     
Sbjct: 219 SQNEWLLKKVLREEWGFEGFVMSDWYAG--------------DNPVEQLKAGNDLIMPGK 264

Query: 334 ---------FLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGA 384
                       +    A+K+ KL E  +D  + N+  V +    F             +
Sbjct: 265 AYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFKNYRY--------S 316

Query: 385 DVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLL-GNYAG 443
           +      H  +A +A  +G+VLL+N    LPL ++  +  AL G           G+   
Sbjct: 317 NKPDLEKHAKVAYEAGAEGVVLLRN-EEALPLSENSKI--ALFGTGQIETIKGGTGSGDT 373

Query: 444 PSCRSITPLQALQNYVEN--TVYYPGC-------------------------DTVACSSA 476
               +I+ L+ ++    N                                    +  +  
Sbjct: 374 HPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFL 433

Query: 477 SIDKAVDIAKGADHVVLMMGLDQTQEKEELDR----VDLVLPGRQQELITRVAE---AAK 529
           S  +   +AK  D  V+++        E  DR     D  L   + +LI  V+       
Sbjct: 434 SEKEIHKLAKKNDVAVIVISRISG---EGYDRKPVKGDFYLSDDETDLIKTVSREFHEQG 490

Query: 530 KPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPG 581
           K VI++L  G PV++   +    +  IL     G+     +A+V+ G  NP 
Sbjct: 491 KKVIVLLNIGSPVEVVSWR--DLVDGILLVWQAGQETGRIVADVLTGRINPS 540
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Length = 351 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query591
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 100.0
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 100.0
3zyz_A 713 Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 100.0
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 100.0
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 100.0
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 100.0
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 100.0
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 100.0
4g6c_A348 Beta-hexosaminidase 1; ssgcid, niaid, structural g 100.0
4gvf_A349 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N 100.0
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 100.0
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-105  Score=918.72  Aligned_cols=486  Identities=28%  Similarity=0.422  Sum_probs=422.4

Q ss_pred             HHHHHHHHhcCCHHHHHHhhhc----CCCCCCCCCCCchhhhhhhccccccCCCcccccCccCCCccCchHHHHHhcCCH
Q 007737           53 SQRARDLVSRLTLDEKISQLVN----SAPAIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDS  128 (591)
Q Consensus        53 ~~r~~~ll~~mtleEKv~ql~~----~~~~~~~~gip~~~~~~~~~~gv~~~g~g~~~~~~~~~~t~fP~~~~laat~d~  128 (591)
                      +.|+++||++||+|||++||.+    ...+++|+|||.+ ++.|++||+..    .++.+ ..++|.||+++++|||||+
T Consensus         3 ~~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~~----~~~~~-~~~~t~fP~~~~laat~d~   76 (845)
T 3abz_A            3 KFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIRG----TKFFD-GVPSGCFPNGTGLASTFDR   76 (845)
T ss_dssp             CCCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCCC----SCSTT-CCCBCCCCCHHHHHHTCCH
T ss_pred             HHHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCeee----eeccC-CCCcCcCcCHHHHHhcCCH
Confidence            4679999999999999999986    3567899999998 67899998752    22211 1248999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcccccccee-eceeeccCCCCCCCccCCCCCCChHHHHHHHHHHhchhccCcCCCCCCCCC
Q 007737          129 YLWYRIGQAIGLEARALYNAGQAIGMTF-WAPNINIFRDPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGK  207 (591)
Q Consensus       129 ~l~~~~g~~~g~e~~a~~~~~~~~Gi~~-~aPv~dv~~~p~~gr~~rsfgeDp~lv~~~a~a~v~G~q~~~g~~~~~~~~  207 (591)
                      ++++++|+++|+|+|++       |||+ |||++||.|||+|||++|+|||||+++++|+.|||+|+|+. |        
T Consensus        77 ~l~~~~g~~~g~E~ra~-------Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~-g--------  140 (845)
T 3abz_A           77 DLLETAGKLMAKESIAK-------NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE-G--------  140 (845)
T ss_dssp             HHHHHHHHHHHHHHHHT-------TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-T--------
T ss_pred             HHHHHHHHHHHHHHHHc-------CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-C--------
Confidence            99999999999999999       9999 99999999999999999999999999999999999999998 6        


Q ss_pred             CceeeeeccccccCCCCCCCCcccccccccCHHHHHhhcCchHHHHHhcCCccEEEeeccccCCcccccCHHHHHHHHhh
Q 007737          208 LQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARR  287 (591)
Q Consensus       208 ~~v~a~~KHFpg~g~~~~~~~~~~~~~~~~~~~~l~~~~l~pF~~ai~~g~~~~vM~s~~~v~g~pa~~s~~~l~~lLR~  287 (591)
                        |++|+|||||||++.    .|...++.+++++|+|+||+||+++|+++.+++||||||.+||+|||+|+++|+++||+
T Consensus       141 --V~a~~KHFpg~g~e~----~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~  214 (845)
T 3abz_A          141 --IAATVKHFVCNDLED----QRFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRD  214 (845)
T ss_dssp             --CBCEEEEETTCCCCT----TTTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCC
T ss_pred             --eeEEeeccccCCccc----CCccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhh
Confidence              999999999999653    35556677899999999999999999744457999999999999999999999999999


Q ss_pred             hcCcceEEEccchhhHhhhccccccCCHHHHHHHHHHcCCCccCcc---hh-HHHHHHHHHcCC-CCHHHHHHHHHHHHH
Q 007737          288 QWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGS---FL-QKHTKAAVKQKK-LPESEIDRALHNLFS  362 (591)
Q Consensus       288 ~~gf~G~visD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~l~~---~~-~~~l~~av~~g~-i~~~~i~~av~ril~  362 (591)
                      ||||+|+|||||+++.              ++++|++||+||+|..   .. .+.|.+||++|. +++++||+||+|||+
T Consensus       215 e~GF~G~VvSD~~~~~--------------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~  280 (845)
T 3abz_A          215 EWKWDGMLMSDWFGTY--------------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLK  280 (845)
T ss_dssp             CTCCCSEEECCTTCCC--------------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHH
T ss_pred             ccCCCeEEEcccccHH--------------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHH
Confidence            9999999999997542              2468999999999862   22 348999999999 999999999999999


Q ss_pred             HHHHcC----CCCCCCCCCCCCCCCcccccCHHHHHHHHHHHhhcceecccCCCCCCCCCCCCceEEEEccCCccccccc
Q 007737          363 VRMRLG----LFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQDGIVLLKNSHGLLPLPKSKSVSLALIGPNANSAKTLL  438 (591)
Q Consensus       363 ~k~~~g----l~~~~p~~~~~~~~~~~~~~~~~~~~la~e~a~~SivLLKN~~~~LPL~~~~~~kv~viGp~a~~~~~~~  438 (591)
                      +|+++|    +|+ +|.    .......+++++|+++++++|++|||||||++++|||++  .+||+||||+++....++
T Consensus       281 ~k~~~g~l~~~~~-~p~----~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~G  353 (845)
T 3abz_A          281 MIKFVVDNLEKTG-IVE----NGPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSG  353 (845)
T ss_dssp             HHHHHHHTHHHHC-CCT----TCCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSC
T ss_pred             HHHHhCCcccccc-CCc----cCccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccC
Confidence            999999    898 442    222222377899999999999999999999999999986  469999999999887666


Q ss_pred             CCCCC-CCCCcCCHHHHHHhhhh-cceecCCCCcc------------------------------------c--------
Q 007737          439 GNYAG-PSCRSITPLQALQNYVE-NTVYYPGCDTV------------------------------------A--------  472 (591)
Q Consensus       439 g~~sg-~~~~~~t~~~~l~~~~~-~v~~~~g~~~~------------------------------------~--------  472 (591)
                      |+++. .+.+.+||+++|++++. ++.|..||...                                    .        
T Consensus       354 ggs~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~  433 (845)
T 3abz_A          354 GGSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFH  433 (845)
T ss_dssp             BSTTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSE
T ss_pred             CCccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCccccccee
Confidence            66554 46678999999998753 25555444200                                    0        


Q ss_pred             --------------------------------------------------------------------------------
Q 007737          473 --------------------------------------------------------------------------------  472 (591)
Q Consensus       473 --------------------------------------------------------------------------------  472 (591)
                                                                                                      
T Consensus       434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~  513 (845)
T 3abz_A          434 VTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTK  513 (845)
T ss_dssp             EEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBC
T ss_pred             eeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcc
Confidence                                                                                            


Q ss_pred             --------------------------------------------CC-cccHHHHHHHhhcCCEEEEEeecCCCCccccCC
Q 007737          473 --------------------------------------------CS-SASIDKAVDIAKGADHVVLMMGLDQTQEKEELD  507 (591)
Q Consensus       473 --------------------------------------------~~-~~~~~~~~~~a~~aD~vIv~~g~~~~~~~Eg~D  507 (591)
                                                                  .+ +..+++++++|++||+||||+|.+...++||.|
T Consensus       514 ~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~D  593 (845)
T 3abz_A          514 ERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYD  593 (845)
T ss_dssp             CEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBC
T ss_pred             cceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCC
Confidence                                                        00 023678889999999999999999899999999


Q ss_pred             CCCCCCChhHHHHHHHHHhhCCCCEEEEEeCCCeeeeccccccCCcceEEEccCCChhHHHHHHHHHhcCCCCCccCccc
Q 007737          508 RVDLVLPGRQQELITRVAEAAKKPVILVLLCGGPVDITFAKYDRNIGSILWAGYPGEAGAVALAEVIFGDHNPGEFTVIA  587 (591)
Q Consensus       508 r~~l~l~~~q~~li~~v~~~~~kpvIvV~~~~~P~dl~~~~~~~~v~Ail~~~~~g~~~g~AladvL~G~~nPsGkLP~t  587 (591)
                      |.+|.||+.|.+||++|++. +||||||+++|+|++|+|++   +++|||++|||||++|+|+||||||++|||||||+|
T Consensus       594 R~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T  669 (845)
T 3abz_A          594 RENMDLPKRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLS  669 (845)
T ss_dssp             CSSSCCCTTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSC
T ss_pred             cccccCCHHHHHHHHHHHHh-CCCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCcee
Confidence            99999999999999999999 89999999999999999884   799999999999999999999999999999999999


Q ss_pred             ccCC
Q 007737          588 VEMQ  591 (591)
Q Consensus       588 ~p~~  591 (591)
                      ||++
T Consensus       670 ~p~~  673 (845)
T 3abz_A          670 WPFK  673 (845)
T ss_dssp             BCSS
T ss_pred             eeCc
Confidence            9974
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Back     alignment and structure
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* Back     alignment and structure
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* Back     alignment and structure
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 591
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 5e-53
d1x38a2214 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, 2e-17
d1tr9a_330 c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol 9e-12
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  183 bits (465), Expect = 5e-53
 Identities = 99/397 (24%), Positives = 165/397 (41%), Gaps = 55/397 (13%)

Query: 45  FCKTTLPISQRARDLVSRLTLDEKISQLV---------------------NSAPAIPRLG 83
           +   T P+  R  DL+ R+TL EKI Q+                      +   ++PR G
Sbjct: 5   YKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKG 64

Query: 84  IPAYEWWSEALHGV----AGVGKGI---------FFNGTIRGATSFPQVILTAASFDSYL 130
             A EW  + + G          GI              + GAT FP  +   A+ D YL
Sbjct: 65  ATAKEWQ-DMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYL 123

Query: 131 WYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYA--V 188
             RIG+A  LE RA            +AP I + RDPRWGR  E+  ED  +       +
Sbjct: 124 VKRIGEATALEVRATGI------QYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELI 177

Query: 189 SYVRGVQGDTFNGG--KLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTY 246
             ++G     F  G   + GK + +AC KHF              + +  +  + L + +
Sbjct: 178 PGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGD---GGTVDGINENNTIINREGLMNIH 234

Query: 247 QPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIY 306
            P +++ + +G ++ +M +Y+  NG+   A+++L++   +    F G++ SD + +  I 
Sbjct: 235 MPAYKNAMDKGVST-VMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRIT 293

Query: 307 D--AEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQKKLPESEIDRALHNLFSVR 364
                 Y+ S + +++  L   M  N            V    +P S ID A+  +  V+
Sbjct: 294 TPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVK 353

Query: 365 MRLGLFNGNPTMQPFGKIGADVVCSPAHQVLALQAAQ 401
             +GLF  NP   P     A+ +    H+ LA +AA+
Sbjct: 354 FTMGLFE-NPYADPA---MAEQLGKQEHRDLAREAAR 386
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 Back     information, alignment and structure
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query591
d1x38a1388 Beta-D-glucan exohydrolase, N-terminal domain {Bar 100.0
d1tr9a_330 Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 100.0
d1x38a2214 Beta-D-glucan exohydrolase, C-terminal domain {Bar 99.95
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=3.7e-71  Score=588.47  Aligned_cols=340  Identities=29%  Similarity=0.465  Sum_probs=272.9

Q ss_pred             CC-CCCCCCCHHHHHHHHHhcCCHHHHHHhhhcC---------------------CCCCCCCCCCchhhhh--hhcc---
Q 007737           43 FP-FCKTTLPISQRARDLVSRLTLDEKISQLVNS---------------------APAIPRLGIPAYEWWS--EALH---   95 (591)
Q Consensus        43 ~~-~~~~~~~~~~r~~~ll~~mtleEKv~ql~~~---------------------~~~~~~~gip~~~~~~--~~~~---   95 (591)
                      .| |+||++|+++||++|+++||+|||||||++.                     ...+++.+.+...|+.  +.++   
T Consensus         2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~~   81 (388)
T d1x38a1           2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKAC   81 (388)
T ss_dssp             CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHHHHHHHHHHHHH
Confidence            46 9999999999999999999999999999753                     1235566666554321  1111   


Q ss_pred             -----cc----ccCCCcccccCccCCCccCchHHHHHhcCCHHHHHHHHHHHHHHHHHhhhcccccccee-eceeeccCC
Q 007737           96 -----GV----AGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTF-WAPNINIFR  165 (591)
Q Consensus        96 -----gv----~~~g~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~e~~a~~~~~~~~Gi~~-~aPv~dv~~  165 (591)
                           |+    +.+..++.  ....+.|.||+++++|+|||+++++++|+++|+|+|++       |||+ ||||+||.+
T Consensus        82 ~~~~~giPlli~~D~e~G~--~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~-------Gin~~~aPv~Dv~~  152 (388)
T d1x38a1          82 MSTRLGIPMIYGIDAVHGQ--NNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT-------GIQYAFAPCIAVCR  152 (388)
T ss_dssp             HTSSSCCCCEEEECCSSSS--TTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT-------TCCEECCCBCCCCS
T ss_pred             HhccCCCCceeecccccCc--ccccccccchhhhhccccCCHHHHHHHHHHhhHHHHhc-------CCccccCCcccccc
Confidence                 11    11122221  11236889999999999999999999999999999999       9999 999999999


Q ss_pred             CCCCCccCCCCCCChHHHHHHHHHHhchhccCcCCCCCC------CCCCceeeeeccccccCCCCCCCCcccccccccCH
Q 007737          166 DPRWGRGQETPGEDPLVTGKYAVSYVRGVQGDTFNGGKL------KGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTM  239 (591)
Q Consensus       166 ~p~~gr~~rsfgeDp~lv~~~a~a~v~G~q~~~g~~~~~------~~~~~v~a~~KHFpg~g~~~~~~~~~~~~~~~~~~  239 (591)
                      ||+|||++|+|||||+++++|+. +|.++|+..+ ....      .+..+|++|+|||||||....   .+......+++
T Consensus       153 ~p~~gr~~et~geDp~l~~~~~~-~v~~~~g~~~-~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~---~~~~~~~~i~~  227 (388)
T d1x38a1         153 DPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVP-KDFTSGMPFVAGKNKVAACAKHFVGDGGTVD---GINENNTIINR  227 (388)
T ss_dssp             CTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCC-TTCCTTCCCCCSTTSCBCEEEEETTGGGCGG---GCTTCEECCCH
T ss_pred             cccccccccCccCCHHHHHHHHh-hhhhhhchhh-hhhcccccccccccCcceeeeeeecCCcccc---CccccccchhH
Confidence            99999999999999999999854 4555543311 0000      123469999999999984421   12223445789


Q ss_pred             HHHHhhcCchHHHHHhcCCccEEEeeccccCCcccccCHHHHHHHHhhhcCcceEEEccchhhHhhhccccccCCHHHHH
Q 007737          240 QDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRQWGFHGYITSDCDAVSIIYDAEGYAKSPEDAV  319 (591)
Q Consensus       240 ~~l~~~~l~pF~~ai~~g~~~~vM~s~~~v~g~pa~~s~~~l~~lLR~~~gf~G~visD~~~m~~~~~~~~~~~~~~ea~  319 (591)
                      ++|++.||+||+.+|++|.. +||++|+.+||+|+|.|+++++++||++|||+|+|||||++|.++..  ++.....+++
T Consensus       228 ~~l~~~~l~pf~~~i~~g~~-~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~--~~~~~~~~~~  304 (388)
T d1x38a1         228 EGLMNIHMPAYKNAMDKGVS-TVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITT--PAGSDYSYSV  304 (388)
T ss_dssp             HHHHHHTSHHHHHHHHTTCC-EEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSS--STTTTHHHHH
T ss_pred             HHHHHHhhhhhHHHHhhccc-cccccccccCCccccCCHHHHHHHHHhccCCCceeecchhhcccccc--ccCCcHHHHH
Confidence            99999999999999998865 99999999999999999999999999999999999999999998864  3334677889


Q ss_pred             HHHHHcCCCccCcc----hhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCHHHHHH
Q 007737          320 VDVLKAGMDVNCGS----FLQKHTKAAVKQKKLPESEIDRALHNLFSVRMRLGLFNGNPTMQPFGKIGADVVCSPAHQVL  395 (591)
Q Consensus       320 ~~al~AG~D~~l~~----~~~~~l~~av~~g~i~~~~i~~av~ril~~k~~~gl~~~~p~~~~~~~~~~~~~~~~~~~~l  395 (591)
                      +.++.||+||+|.+    .+.+.|.+||++|.|+++|||+||+|||++|+++|||| +|...+.   ....+++++|+++
T Consensus       305 ~~a~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd-~p~~~~~---~~~~i~~~~h~~~  380 (388)
T d1x38a1         305 KASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADPA---MAEQLGKQEHRDL  380 (388)
T ss_dssp             HHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCGG---GGGGTTCHHHHHH
T ss_pred             HHHHhcCCCeecCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCChh---hhhhcCCHHHHHH
Confidence            99999999998753    36688999999999999999999999999999999999 6643221   1245789999999


Q ss_pred             HHHHHhhc
Q 007737          396 ALQAAQDG  403 (591)
Q Consensus       396 a~e~a~~S  403 (591)
                      ++|+|+||
T Consensus       381 a~~aA~~S  388 (388)
T d1x38a1         381 AREAARKS  388 (388)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhcC
Confidence            99999997
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure