Citrus Sinensis ID: 007813

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------59
Protein Sequence
MLVYNAGWFCTFIVFDFEQVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINSQFDGTSFPQQNPLVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEMLENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEcccccccccccccccccccccEEEEEEEcccccEEEcccccccEEEEEEEcccccccccccccHHHHHHccccccccccccccccEEEEEcccEEEccccEEEccccccccccEEEEEEEEccccccccEEEcccccEEEEEcccccccccccccccccccEEcccccccHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHcccccHHHHHHHHHHcccccccccEEEEEccccccEEEEEccccEEEEEEEccEEEccccccHHHHHHHHHHHHHHHHHccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEHHcccEEEEEHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEcccccccccccEEEEcccccEEEEEEEccccEEEcccccccEEEEEEEEcccccccccccccHHHHHHccEccccccccEEEEEEEEEEEccEEEEcEEEEEcccccccccEEEEEEEEEccccccEEEEEEEcccEEEEcccccccccccccccccHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHcccccEEEEEEccccccEEEEEccEEEEEEEEEcccEEcHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccHHHHccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mlvynagwFCTFIVFDFEQVSEEVERALAKlgpakltgrsspkriegpdgrnlqlhfrtrlslplftggkvegeqgTAIHIVLIdantghvvttgpesLVKLDVVVLEgdfnnedddnwtqeEFVSHVVKeregkrpllsgdlQVTLKegvgtlgdltftdnsswirsRKFRLGLKVASGYCEgirireaktdaftvkdhrgelykkhyppalndEVWRLEkigkdgsfhkrlnkagifTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKtcvlsgklyvyypddprnvgvVFNNIYEFCGliadgqyhsadslsesqKVHVDTLVKKAYDNWMHVIEYDGKsllgftqnksvdapptdfqtgppnytnpfsqqlalptlsvpvppeqpsmdsgltvggyndgipsrfslqsqnvninsqfdgtsfpqqnplvsvpheahiprsenvlalgppqssslvsqtigtsnpapyrgiedfFSEEEIRMRSHEMLENEDMQQHLLRIFNmggqghpsfnvaedaypysspfmanpspnysfdddssrssgkAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS
Flexible Loop (DISEMBL)
mlvynagwFCTFIVFDFEQVSEEVERALAklgpakltgrsspkriegpdgrnlqlhFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDfnnedddnwtqEEFVSHvvkeregkrpllsgdlqvtlkegvgtlgdltftdnsswirsrkfrlglkvasgycegirireaktdaftvkdhrgelykkhyppalndevWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIlgsgmsnkmWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINSQFDGTSFPQQNPLVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEMLENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS
Low Complexity Region (SEG)
MLVYNAGWFCTFIVFDFEQVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINSQFDGTSFPQQNPLVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEMLENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS
Disordered region (IsUnstruct)
*LVYNAGWFCTFIVFDFEQVSEEV****************************LQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKE****RPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFT*******************************************************************************************************************************************************LLRIFNMG****************************************AVVGWLKLKAALRWGIFIRKKA*************
Disordered Region (DISOPRED)
*LVYN**WFCTFIVFDFEQVSEEVERALA************************QLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSAD************LVKKAYDNWMHVIEYDGKSLL**********************************************************************************************************************************DFFS***************DMQQHLLRI***********************************************GWLKLKAALRWGIFIRKKAAERRAQLVE****
Disordered Region (DISEMBL)
MLVYNAGWFCTFIVFDFEQVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINSQFDGTSFPQQNPLVSVPHEAHIPRSENVLALG*************TSNPAPYRGIEDFFSEEEIRMRSHEMLENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNY*************VVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS
Disordered Region (DISPRO)
MLVYNAGWFCTFIVFDFEQVSEEVERALAKLGPAKLTG*SSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFT*****************N*****SQ*******************SGLTVGGYNDGIPSRFSLQSQNVNIN***DGTS*******VS***E**IPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEMLENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLV*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLVYNAGWFCTFIVFDFEQVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINSQFDGTSFPQQNPLVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEMLENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	588
359495503	759	PREDICTED: uncharacterized protein LOC10	0.960	0.744	0.798	0.0
147785125	637	hypothetical protein VITISV_001611 [Viti	0.960	0.886	0.796	0.0
302144195	636	unnamed protein product [Vitis vinifera]	0.957	0.885	0.799	0.0
224147096	599	predicted protein [Populus trichocarpa]	0.965	0.948	0.782	0.0
224114057	637	predicted protein [Populus trichocarpa]	0.964	0.890	0.770	0.0
357475877	629	Calmodulin-binding protein [Medicago tru	0.960	0.898	0.742	0.0
356521307	623	PREDICTED: uncharacterized protein LOC10	0.960	0.906	0.766	0.0
356555022	635	PREDICTED: uncharacterized protein LOC10	0.962	0.891	0.736	0.0
356527925	624	PREDICTED: uncharacterized protein LOC10	0.960	0.905	0.753	0.0
224114061	625	predicted protein [Populus trichocarpa]	0.942	0.886	0.743	0.0

>gi|359495503|ref|XP_002273993.2| PREDICTED: uncharacterized protein LOC100256775 [Vitis vinifera]

 Score =  938 bits (2424), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/570 (79%), Positives = 503/570 (88%), Gaps = 5/570 (0%)

Query: 20  VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAI 79
           VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQL FR+RLSLPLFTGGKVEGEQGT I
Sbjct: 192 VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQGTTI 251

Query: 80  HIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLL 139
           HIVL+DA+TGHVVT+GPES VKLDVVVLEGDFNNEDDD W QEEF SHVVKEREGKRPLL
Sbjct: 252 HIVLLDASTGHVVTSGPESSVKLDVVVLEGDFNNEDDDGWNQEEFESHVVKEREGKRPLL 311

Query: 140 SGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKD 199
           +GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFRLGLKVASGYCEG+RIREAKTDAFTVKD
Sbjct: 312 TGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGYCEGMRIREAKTDAFTVKD 371

Query: 200 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 259
           HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL
Sbjct: 372 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 431

Query: 260 GSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADS 319
           GSGMSNKMWDVLV+HAKTCVLSGKLYVYYPDD R+VGVVFNNIYE  GLIA GQYHSADS
Sbjct: 432 GSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDVRSVGVVFNNIYELSGLIAGGQYHSADS 491

Query: 320 LSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQ 379
           L+++QKV VDTLVKKAYDNW+ V+EYDGKSLL F Q+KS  +  T+   GP +Y N F  
Sbjct: 492 LTDNQKVFVDTLVKKAYDNWISVVEYDGKSLLNFNQSKSSGSSQTEVAMGPQDYPNSFDH 551

Query: 380 QLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINS--QFDGTSFPQQNP 437
           QL LP+L V VPP+QPS+   +TVGGYND +P+R+ +QSQNVN+N+  QFDGTSFP QN 
Sbjct: 552 QLTLPSLPVSVPPQQPSVGPSITVGGYNDNMPTRYPIQSQNVNLNAPMQFDGTSFPLQNQ 611

Query: 438 LVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEML 497
           L+  PH+  +P +E++LALGPP +++   Q++GTSN   YR ++DFF E+EIRMRSHEML
Sbjct: 612 LIGNPHQVQLPSNESMLALGPPPATTPGFQSVGTSN-LNYR-VDDFFPEDEIRMRSHEML 669

Query: 498 ENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVG 557
           EN+DM QHLLRIFNMG  GH S NV +D YPYSS +M   S  Y FD+D SRSSGKAVVG
Sbjct: 670 ENDDM-QHLLRIFNMGNHGHASANVTDDGYPYSSAYMPTSSTGYGFDEDRSRSSGKAVVG 728

Query: 558 WLKLKAALRWGIFIRKKAAERRAQLVELDD 587
           WLKLKAALRWGIF+RKKAAERRAQLVELD+
Sbjct: 729 WLKLKAALRWGIFVRKKAAERRAQLVELDE 758

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147785125|emb|CAN66517.1| hypothetical protein VITISV_001611 [Vitis vinifera]

 Score =  932 bits (2408), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/570 (79%), Positives = 502/570 (88%), Gaps = 5/570 (0%)

Query: 20  VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAI 79
           VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQL FR+RLSLPLFTGGKVEGEQGT I
Sbjct: 64  VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQGTTI 123

Query: 80  HIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLL 139
           HIVL+DA+TGHVVT+GPES VKLDVVVLEGDFNNEDDD W QEEF SHVVKEREGKRPLL
Sbjct: 124 HIVLLDASTGHVVTSGPESSVKLDVVVLEGDFNNEDDDGWNQEEFESHVVKEREGKRPLL 183

Query: 140 SGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKD 199
           +GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFRLGLKVASGYCEG+RIREAKTDAFTVKD
Sbjct: 184 TGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGYCEGMRIREAKTDAFTVKD 243

Query: 200 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 259
           HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL
Sbjct: 244 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 303

Query: 260 GSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADS 319
           GSGMSNKMWDVLV+HAKTCVLSGKLYVYYPDD R+VGVVFNNIYE  GLIA GQYHSADS
Sbjct: 304 GSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDVRSVGVVFNNIYELSGLIAGGQYHSADS 363

Query: 320 LSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQ 379
           L+E+QKV VDTLVKKAYDNW+ V+EYDGKSLL F Q+KS  +  T+   GP +Y N F  
Sbjct: 364 LTENQKVFVDTLVKKAYDNWISVVEYDGKSLLNFNQSKSSGSSQTEVAMGPQDYPNSFDH 423

Query: 380 QLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINS--QFDGTSFPQQNP 437
           QL LP+L V VPP+QPS+   +TVGGYND +P+R+ +QSQNVN+N+  QFDGTSFP QN 
Sbjct: 424 QLTLPSLPVSVPPQQPSVGPSITVGGYNDNMPTRYPIQSQNVNLNAPMQFDGTSFPLQNQ 483

Query: 438 LVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEML 497
           L+  PH+  +P +E++LALGPP +++   Q++GTSN   YR ++DFF E+EIRMRSHEML
Sbjct: 484 LIGNPHQVQLPSNESMLALGPPPATTPGFQSVGTSN-LNYR-VDDFFPEDEIRMRSHEML 541

Query: 498 ENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVG 557
           EN+DM QHLLRIFNMG  GH S NV +D YPYSS +M   S  Y FD+D SRSSGKAVVG
Sbjct: 542 ENDDM-QHLLRIFNMGNHGHASANVTDDGYPYSSAYMPTSSTGYGFDEDRSRSSGKAVVG 600

Query: 558 WLKLKAALRWGIFIRKKAAERRAQLVELDD 587
           WLKLKAALRWGIF+RKKAAERRAQLV+ D+
Sbjct: 601 WLKLKAALRWGIFVRKKAAERRAQLVDDDE 630

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302144195|emb|CBI23322.3| unnamed protein product [Vitis vinifera]

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/568 (79%), Positives = 501/568 (88%), Gaps = 5/568 (0%)

Query: 20  VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAI 79
           VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQL FR+RLSLPLFTGGKVEGEQGT I
Sbjct: 64  VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQGTTI 123

Query: 80  HIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLL 139
           HIVL+DA+TGHVVT+GPES VKLDVVVLEGDFNNEDDD W QEEF SHVVKEREGKRPLL
Sbjct: 124 HIVLLDASTGHVVTSGPESSVKLDVVVLEGDFNNEDDDGWNQEEFESHVVKEREGKRPLL 183

Query: 140 SGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKD 199
           +GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFRLGLKVASGYCEG+RIREAKTDAFTVKD
Sbjct: 184 TGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGYCEGMRIREAKTDAFTVKD 243

Query: 200 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 259
           HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL
Sbjct: 244 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 303

Query: 260 GSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADS 319
           GSGMSNKMWDVLV+HAKTCVLSGKLYVYYPDD R+VGVVFNNIYE  GLIA GQYHSADS
Sbjct: 304 GSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDVRSVGVVFNNIYELSGLIAGGQYHSADS 363

Query: 320 LSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQ 379
           L+++QKV VDTLVKKAYDNW+ V+EYDGKSLL F Q+KS  +  T+   GP +Y N F  
Sbjct: 364 LTDNQKVFVDTLVKKAYDNWISVVEYDGKSLLNFNQSKSSGSSQTEVAMGPQDYPNSFDH 423

Query: 380 QLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINS--QFDGTSFPQQNP 437
           QL LP+L V VPP+QPS+   +TVGGYND +P+R+ +QSQNVN+N+  QFDGTSFP QN 
Sbjct: 424 QLTLPSLPVSVPPQQPSVGPSITVGGYNDNMPTRYPIQSQNVNLNAPMQFDGTSFPLQNQ 483

Query: 438 LVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEML 497
           L+  PH+  +P +E++LALGPP +++   Q++GTSN   YR ++DFF E+EIRMRSHEML
Sbjct: 484 LIGNPHQVQLPSNESMLALGPPPATTPGFQSVGTSN-LNYR-VDDFFPEDEIRMRSHEML 541

Query: 498 ENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVG 557
           EN+DM QHLLRIFNMG  GH S NV +D YPYSS +M   S  Y FD+D SRSSGKAVVG
Sbjct: 542 ENDDM-QHLLRIFNMGNHGHASANVTDDGYPYSSAYMPTSSTGYGFDEDRSRSSGKAVVG 600

Query: 558 WLKLKAALRWGIFIRKKAAERRAQLVEL 585
           WLKLKAALRWGIF+RKKAAERRAQLVEL
Sbjct: 601 WLKLKAALRWGIFVRKKAAERRAQLVEL 628

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224147096|ref|XP_002336406.1| predicted protein [Populus trichocarpa] gi|222834923|gb|EEE73372.1| predicted protein [Populus trichocarpa]

 Score =  923 bits (2386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/574 (78%), Positives = 495/574 (86%), Gaps = 6/574 (1%)

Query: 20  VSEEVERALAKLGPAKLT---GRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQG 76
           VSEEVERALAKLGPAKLT    RSSPKR+EGPDGRNLQLHFR+RLSLPLFT GKVEGEQG
Sbjct: 27  VSEEVERALAKLGPAKLTVRECRSSPKRLEGPDGRNLQLHFRSRLSLPLFTAGKVEGEQG 86

Query: 77  TAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKR 136
            AIHIVLID NTG VVT+GPES VKLDV+VLEGDFNNEDDDNWT+EEF SHVVKEREGKR
Sbjct: 87  AAIHIVLIDGNTGRVVTSGPESSVKLDVIVLEGDFNNEDDDNWTREEFESHVVKEREGKR 146

Query: 137 PLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFT 196
           PLL+GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFRLGLKVASG CEGIR+REAKTDAFT
Sbjct: 147 PLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEGIRVREAKTDAFT 206

Query: 197 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR 256
           VKDHRGELYKKHYPPAL DEVWRLEKIGKDGSFHKRLNKAGI++VEDFLRLVVRDSQRLR
Sbjct: 207 VKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLNKAGIYSVEDFLRLVVRDSQRLR 266

Query: 257 NILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHS 316
            ILGSGMSNKMWDVLV+HAKTCVLSGKLY+YYP+D +NVGVVFNNIYE  GLIA+GQY+S
Sbjct: 267 TILGSGMSNKMWDVLVEHAKTCVLSGKLYIYYPEDEKNVGVVFNNIYELSGLIANGQYYS 326

Query: 317 ADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNP 376
           ADSLS++QKV+VD+LVKKAYDNWMH IEYDGKSLL F  N+ +DA   +  +    + N 
Sbjct: 327 ADSLSDNQKVYVDSLVKKAYDNWMHAIEYDGKSLLDFKMNQGIDALQNEVPSVQQEFLNS 386

Query: 377 FSQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINS--QFDGTSFPQ 434
           +  Q+ LPT+SVPVP EQP MDSGL VGGYND + +RFS+  QN N+N+  QFD TS P 
Sbjct: 387 YDHQVTLPTISVPVPSEQPVMDSGLAVGGYNDDMATRFSMHPQNGNLNTSFQFDATSLPS 446

Query: 435 QNPLVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSH 494
           QNPLV    +  +P S+N+LALG PQ+S+   Q+ G+SN   Y+G EDFFSEEEIR RSH
Sbjct: 447 QNPLVHTSQQIQVPGSDNLLALGRPQTSTPGFQSFGSSNLNSYKGTEDFFSEEEIRTRSH 506

Query: 495 EMLENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKA 554
           EMLEN+DM QHLLRIFNMGGQG  SFN  ED YP+SS  M    PNYSF DD SRSSGKA
Sbjct: 507 EMLENDDM-QHLLRIFNMGGQGLSSFNATEDGYPFSSTNMPTAPPNYSFGDDPSRSSGKA 565

Query: 555 VVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS 588
           VVGWLKLKAALRWGIF+RKKAAERRAQL+ELDDS
Sbjct: 566 VVGWLKLKAALRWGIFVRKKAAERRAQLIELDDS 599

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114057|ref|XP_002316655.1| predicted protein [Populus trichocarpa] gi|222859720|gb|EEE97267.1| predicted protein [Populus trichocarpa]

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/571 (77%), Positives = 490/571 (85%), Gaps = 4/571 (0%)

Query: 20  VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAI 79
           VSEEVERALAK+GPAKLTGRSSPK IEGP GRNLQLHFR+RLSLPLFTGGKVEGEQG AI
Sbjct: 69  VSEEVERALAKIGPAKLTGRSSPKCIEGPGGRNLQLHFRSRLSLPLFTGGKVEGEQGAAI 128

Query: 80  HIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLL 139
           HIVLID NTGHVVT+GPES VKLDV+VLEGDFNNEDDDNWTQEEF SHVVKEREGKRPLL
Sbjct: 129 HIVLIDGNTGHVVTSGPESSVKLDVIVLEGDFNNEDDDNWTQEEFESHVVKEREGKRPLL 188

Query: 140 SGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKD 199
           +GDLQVTLKEGVGTLG+L FTDNSSWIRSRKFRLGLKVASG CE IRIREAKTDAFTVKD
Sbjct: 189 TGDLQVTLKEGVGTLGELIFTDNSSWIRSRKFRLGLKVASGCCEDIRIREAKTDAFTVKD 248

Query: 200 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 259
           HRGELYKKHYPPALND+VWRLEKIGKDGSFHKRL KAGI++VEDFLRLVVRD QRLR IL
Sbjct: 249 HRGELYKKHYPPALNDDVWRLEKIGKDGSFHKRLTKAGIYSVEDFLRLVVRDPQRLRTIL 308

Query: 260 GSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADS 319
           GSGMSNKMWD LV+HAKTCVLSGK Y+YYP+D +NVG+VFNNIYEF GLIA+G+Y+S+ S
Sbjct: 309 GSGMSNKMWDSLVEHAKTCVLSGKHYIYYPEDAKNVGIVFNNIYEFSGLIANGEYYSSGS 368

Query: 320 LSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQ 379
           LS++QKV+VD+LVKKAYDNWMHVIEYDGKSLL F QN+ + A   D  +    + N +  
Sbjct: 369 LSDNQKVYVDSLVKKAYDNWMHVIEYDGKSLLDFKQNQGIVASQNDVPSSQQEFLNSYDH 428

Query: 380 QLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINS--QFDGTSFPQQNP 437
           Q+ LP +SVPVP EQP MDSG  VGGYN+ + +RFS+ SQN N+N+  QFD  S   QNP
Sbjct: 429 QVTLPIMSVPVPSEQPVMDSGPIVGGYNNDMAARFSIHSQNGNLNTPFQFDAASITLQNP 488

Query: 438 LVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEML 497
           +V+   +  +P ++N+LAL PPQSS    Q+ GT N   Y G ED+FSEEEIR RSHEML
Sbjct: 489 MVNTSQQIQVPGTDNLLALAPPQSSMSGFQSFGTLNLNSYGGTEDYFSEEEIRTRSHEML 548

Query: 498 ENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVG 557
           ENEDM Q+LLR F+MGGQG  SFNV ED YPYSS +M  PSP+Y F+DD SRSSGKAVVG
Sbjct: 549 ENEDM-QNLLRGFHMGGQGPSSFNVTEDGYPYSS-YMPCPSPSYCFEDDPSRSSGKAVVG 606

Query: 558 WLKLKAALRWGIFIRKKAAERRAQLVELDDS 588
           WLKLKAALRWGIF+RKKAAERRAQLVELDDS
Sbjct: 607 WLKLKAALRWGIFVRKKAAERRAQLVELDDS 637

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475877|ref|XP_003608224.1| Calmodulin-binding protein [Medicago truncatula] gi|355509279|gb|AES90421.1| Calmodulin-binding protein [Medicago truncatula]

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/571 (74%), Positives = 486/571 (85%), Gaps = 6/571 (1%)

Query: 20  VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAI 79
           VSEEVERALAKLGP KL GRSSPKRIEGPD  NLQLHF+TRLSLPLFTGGKVEGEQG AI
Sbjct: 63  VSEEVERALAKLGPTKLNGRSSPKRIEGPDDNNLQLHFKTRLSLPLFTGGKVEGEQGAAI 122

Query: 80  HIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLL 139
           HIVL+DANTGH+VT+GPES  KLDV VLEGDFNNEDD+NW++EEF SH+VKEREGKRPLL
Sbjct: 123 HIVLVDANTGHIVTSGPESCAKLDVFVLEGDFNNEDDENWSEEEFESHIVKEREGKRPLL 182

Query: 140 SGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKD 199
           SGDLQV LK+GVGTLG+++FTDNSSWIRSRKFRLGLKV+SG+C+G+RIREAK++AFTVKD
Sbjct: 183 SGDLQVILKDGVGTLGEISFTDNSSWIRSRKFRLGLKVSSGFCDGMRIREAKSEAFTVKD 242

Query: 200 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 259
           HRGELYKKHYPPAL+DEVWRLEKIGKDGSFHKRLNKAG+F VEDFLRLV+RD QRLRNIL
Sbjct: 243 HRGELYKKHYPPALHDEVWRLEKIGKDGSFHKRLNKAGVFNVEDFLRLVIRDPQRLRNIL 302

Query: 260 GSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADS 319
           GSGMSNKMWD+LV+HAKTCVLSGKLYVYYP+D RNVGVVFN+IYE  GLIA+ QYH+ADS
Sbjct: 303 GSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNHIYELSGLIANDQYHTADS 362

Query: 320 LSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQ 379
           LSESQKV+VDTLVKKAYDNWMHVIEYDGKSLL + Q+K+++        G   Y+N   Q
Sbjct: 363 LSESQKVYVDTLVKKAYDNWMHVIEYDGKSLLNYNQDKNLEPAHPQALMGSHEYSN-LIQ 421

Query: 380 QLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINS--QFDGTSFPQQNP 437
           Q ++ +L  PV   QPSMD+G TVGGY+DG  + FS+QSQN N+NS  QFD  +F  Q+ 
Sbjct: 422 QTSIHSLPHPVNTGQPSMDTGATVGGYHDGTTTSFSMQSQNTNLNSSIQFDDNAFSLQSQ 481

Query: 438 LVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEML 497
           L+SVPH+A + RSEN + LG PQ+ +   QT   SN + YR +EDFF EEEIR+RSHEML
Sbjct: 482 LMSVPHQAQLQRSENGMMLGMPQTVTHGFQTASISN-STYR-VEDFFPEEEIRIRSHEML 539

Query: 498 ENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVG 557
           ENEDMQQ LLR+FNMG   H SFN  ED YP  S +M   + +Y+FDD+   SSGKAVVG
Sbjct: 540 ENEDMQQ-LLRMFNMGSHAHASFNAHEDGYPNPSAYMPANNMSYNFDDEPKSSSGKAVVG 598

Query: 558 WLKLKAALRWGIFIRKKAAERRAQLVELDDS 588
           WLKLKAALRWGIF+RKKAA+RRAQL+ELDDS
Sbjct: 599 WLKLKAALRWGIFVRKKAADRRAQLIELDDS 629

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521307|ref|XP_003529298.1| PREDICTED: uncharacterized protein LOC100812605 [Glycine max]

 Score =  857 bits (2214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/570 (76%), Positives = 495/570 (86%), Gaps = 5/570 (0%)

Query: 20  VSEEVERALAKLGPAKL-TGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTA 78
           VSEEVERALAKLGPAKL TGRSSPKRIEGPDG+NLQLHF+TRLSLPLFTGGKVEGEQGTA
Sbjct: 56  VSEEVERALAKLGPAKLNTGRSSPKRIEGPDGKNLQLHFKTRLSLPLFTGGKVEGEQGTA 115

Query: 79  IHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPL 138
           IHIVLIDAN+GH+VT+GPES V+LDV+VLEGDFNNEDDDNW +EEF SH+VKEREGKRPL
Sbjct: 116 IHIVLIDANSGHIVTSGPESCVRLDVIVLEGDFNNEDDDNWDEEEFDSHIVKEREGKRPL 175

Query: 139 LSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVK 198
           L+GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFRLGLKVASG CE +RIREAK++ FTVK
Sbjct: 176 LTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEEMRIREAKSEPFTVK 235

Query: 199 DHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNI 258
           DHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGI+ VEDFLRLVVRD QRLRNI
Sbjct: 236 DHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYMVEDFLRLVVRDPQRLRNI 295

Query: 259 LGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSAD 318
           LGSGMSNKMWD+LV+HAKTCVLSGKLYVYYP+D RNVGVVFNNIYE  GLIA+ QY+SAD
Sbjct: 296 LGSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNNIYELSGLIANDQYYSAD 355

Query: 319 SLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFS 378
           SLSE+QKV+VDTLVKKAYDNWMHVIEYDGKSL+   ++K++D            Y+N   
Sbjct: 356 SLSENQKVYVDTLVKKAYDNWMHVIEYDGKSLINDNEDKALDTTHPQAPMTSHEYSNSL- 414

Query: 379 QQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQ-NVNINSQFDGTSFPQQNP 437
           QQ+++P L +PV P QPSMDSG+TVGGY+DG  SRFSLQ   N+N + QFD  +FP QN 
Sbjct: 415 QQISIPALPLPVHPGQPSMDSGVTVGGYHDGTASRFSLQPHPNLNSSIQFDDNAFPLQNQ 474

Query: 438 LVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEML 497
           L+S  H A +PR+EN   +GPPQSS+   + +  SNP  YRG+E++F EEEIR+RS+EML
Sbjct: 475 LMSASHHAQLPRNENGQTIGPPQSSTHGFEPVSISNPT-YRGVEEYFPEEEIRIRSNEML 533

Query: 498 ENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVG 557
           ENEDM QHLLRIFNMGGQ HP+FN  +D YP SS +++     Y+FDD+ +RSSGKAVVG
Sbjct: 534 ENEDM-QHLLRIFNMGGQPHPTFNAQDDGYPSSSTYISANPMGYNFDDEPNRSSGKAVVG 592

Query: 558 WLKLKAALRWGIFIRKKAAERRAQLVELDD 587
           WLKLKAALRWGIFIRK+AAERRAQLVELDD
Sbjct: 593 WLKLKAALRWGIFIRKQAAERRAQLVELDD 622

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555022|ref|XP_003545838.1| PREDICTED: uncharacterized protein LOC100802994 [Glycine max]

 Score =  849 bits (2193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/573 (73%), Positives = 477/573 (83%), Gaps = 7/573 (1%)

Query: 20  VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAI 79
           VSEEVE ALAKL PAKL+GRSSPK IEGPD  +LQL FRTRLSLPLFTGGKVEGE G+AI
Sbjct: 64  VSEEVECALAKLVPAKLSGRSSPKGIEGPDDSSLQLQFRTRLSLPLFTGGKVEGEHGSAI 123

Query: 80  HIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLL 139
           HIVLID  TGHVVT GP S VKLDV+VLEGDFNNEDDDNW++E F SHVVKEREGKRPLL
Sbjct: 124 HIVLIDTTTGHVVTCGPASCVKLDVIVLEGDFNNEDDDNWSEEYFDSHVVKEREGKRPLL 183

Query: 140 SGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKD 199
           +GDLQVTLKEGVGTLG+LTFTDNSSWIRSRKFR+GLKV+ G  EG+RIREAKT+AFTVKD
Sbjct: 184 TGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRMGLKVSPGCYEGMRIREAKTEAFTVKD 243

Query: 200 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 259
           HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGI+TVED ++LVVRD QRLRNIL
Sbjct: 244 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDVVQLVVRDPQRLRNIL 303

Query: 260 GSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADS 319
           GSGMSNKMWDVLV+HAKTCVLSGKLYVYYPDD RNVGVVFNNIYE  GLI + QY+SADS
Sbjct: 304 GSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLITNDQYYSADS 363

Query: 320 LSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNY--TNPF 377
           LS+ QKV+VDTLVKKAY+NWMHVIEYDG+SLL + QNK++         G  +Y  +N  
Sbjct: 364 LSDGQKVYVDTLVKKAYENWMHVIEYDGESLLNYNQNKTLGTSQPLAPVGSHDYSISNSL 423

Query: 378 SQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINS--QFDGTSFPQQ 435
            QQ ++P+L VP+   QPSM+  +TVGGY++   +R S+Q QN N++S  QFD T+FP Q
Sbjct: 424 DQQTSIPSLPVPLTTGQPSMNPAVTVGGYHNVTTTRCSMQPQNDNLHSSIQFDNTAFPLQ 483

Query: 436 NPLVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHE 495
           N L+S  H +  PR+EN L LG  Q ++   Q +  SNP  YRG+ED+F E+EIR RSHE
Sbjct: 484 NQLMSASHHSQFPRNENGLTLGTRQPATPGFQNVSISNPN-YRGLEDYFPEDEIRTRSHE 542

Query: 496 MLENEDMQQHLLRIFNM-GGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKA 554
           MLENEDM QHLLRIFNM GGQ H  FN  EDAYPYSS +M   S + + DD+ +RSSGKA
Sbjct: 543 MLENEDM-QHLLRIFNMGGGQSHAPFNTQEDAYPYSSAYMPAASMSSNLDDEQNRSSGKA 601

Query: 555 VVGWLKLKAALRWGIFIRKKAAERRAQLVELDD 587
           VVGWLKLKAALRWGIFIRK+AAERRAQLVELDD
Sbjct: 602 VVGWLKLKAALRWGIFIRKRAAERRAQLVELDD 634

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527925|ref|XP_003532556.1| PREDICTED: uncharacterized protein LOC100806393 [Glycine max]

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/571 (75%), Positives = 489/571 (85%), Gaps = 6/571 (1%)

Query: 20  VSEEVERALAKLGPAKL--TGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGT 77
           VSEEVERALAKLGPAKL  TGRSSPK IEGPDG+ LQLHF+TRLSLPLFTGGKVEGEQGT
Sbjct: 56  VSEEVERALAKLGPAKLNNTGRSSPKWIEGPDGKILQLHFKTRLSLPLFTGGKVEGEQGT 115

Query: 78  AIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRP 137
           +IHIVLIDANTGH+VT+GPES V+LDV+VLEGDFNNEDDDNW +EEF SH+VKEREGKRP
Sbjct: 116 SIHIVLIDANTGHIVTSGPESCVRLDVIVLEGDFNNEDDDNWDEEEFDSHIVKEREGKRP 175

Query: 138 LLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTV 197
           LL+GDLQVTLKEG+GTLG+LTFTDNSSWIRSRKFRLGLKVASG CE +RIREAK++ FTV
Sbjct: 176 LLTGDLQVTLKEGLGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEEMRIREAKSEPFTV 235

Query: 198 KDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRN 257
           KDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGI+TVEDFLR VVRD QRLRN
Sbjct: 236 KDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDFLRFVVRDPQRLRN 295

Query: 258 ILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSA 317
           ILGSGMSNKMWD+LV+HAKTCVLSGKLYVYYPDD RNVGVVFNNIYE  GLIA+ QY+SA
Sbjct: 296 ILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLIANDQYYSA 355

Query: 318 DSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPF 377
           DSLSE+QKV+VDTLVKKAYDNWMHVIEYDGKSL+   ++K++D            Y+N  
Sbjct: 356 DSLSENQKVYVDTLVKKAYDNWMHVIEYDGKSLINDNEDKTLDTTHPQAPMTSHEYSNSL 415

Query: 378 SQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQ-NVNINSQFDGTSFPQQN 436
            QQ+++P L +P+ P QPS+DSG+ VGGY+DG  SRFSLQ   N+N + QFD  +FP QN
Sbjct: 416 -QQISIPALPLPLHPGQPSVDSGVAVGGYHDGTASRFSLQPHPNLNSSIQFDDNAFPLQN 474

Query: 437 PLVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEM 496
            L+SV H   +PR+EN   +GPPQSS+   + +  SNP  YRG E++F EEEIR+RS+EM
Sbjct: 475 QLMSVSHHTQLPRNENGRTVGPPQSSTHGFEPLTISNPT-YRGAEEYFPEEEIRIRSNEM 533

Query: 497 LENEDMQQHLLRIFNMGGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVV 556
           LEN DMQ HLLRIFNMGGQ HP+ N  +D YP SS +++     Y+FDD+ +RSSGKAVV
Sbjct: 534 LENNDMQ-HLLRIFNMGGQSHPTLNAQDDGYPSSSTYISANPMGYNFDDEPNRSSGKAVV 592

Query: 557 GWLKLKAALRWGIFIRKKAAERRAQLVELDD 587
           GWLKLKAALRWGIFIRK+AAERRAQLVELDD
Sbjct: 593 GWLKLKAALRWGIFIRKQAAERRAQLVELDD 623

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114061|ref|XP_002316656.1| predicted protein [Populus trichocarpa] gi|222859721|gb|EEE97268.1| predicted protein [Populus trichocarpa]

 Score =  835 bits (2157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/574 (74%), Positives = 477/574 (83%), Gaps = 20/574 (3%)

Query: 20  VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAI 79
           VSEEVERALAKLGPAKL GRSSPK+IEGPDGRNLQLHFR+R+SLPLFTGGKVEGEQG AI
Sbjct: 67  VSEEVERALAKLGPAKLNGRSSPKQIEGPDGRNLQLHFRSRVSLPLFTGGKVEGEQGAAI 126

Query: 80  HIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLL 139
           HIVLIDANTG  VT+GPES VKLD++VLEGDFN+EDDDNWTQE+F SHVVKEREGKRPLL
Sbjct: 127 HIVLIDANTGCAVTSGPESSVKLDLIVLEGDFNDEDDDNWTQEKFESHVVKEREGKRPLL 186

Query: 140 SGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKD 199
           +GDLQVTLK+GVGTLG+LTFTDNSSW RSRKFRLGLKVASGYCEGIRIREAKTDA TVKD
Sbjct: 187 TGDLQVTLKQGVGTLGELTFTDNSSWTRSRKFRLGLKVASGYCEGIRIREAKTDAITVKD 246

Query: 200 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 259
           HRGELYKKHYPP LNDEVWRLEKIGKDGSFHKRLNKAGI TVEDFLRL+VRD+Q LR  L
Sbjct: 247 HRGELYKKHYPPTLNDEVWRLEKIGKDGSFHKRLNKAGIHTVEDFLRLIVRDAQGLRTTL 306

Query: 260 GSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADS 319
           GSGMSNKMWD LV+HAKTCVLSGKLY+YYPDD +NVGVVFNNIYE  GLI++GQ++SADS
Sbjct: 307 GSGMSNKMWDSLVEHAKTCVLSGKLYIYYPDDAKNVGVVFNNIYELSGLISNGQFYSADS 366

Query: 320 LSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQ 379
           L ++QK++VD+LVKKAYDNWMHVIEYDG SLL F Q++ V A   D  +G  ++ NP+  
Sbjct: 367 LPDNQKIYVDSLVKKAYDNWMHVIEYDGNSLLDFKQHQGVAASQNDVPSGHQDFLNPYDH 426

Query: 380 QLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINS--QFDGTSFPQQNP 437
           Q +LPT+SVPVP EQP + S   +GGY DG  +RFS+  QN ++N+  QFD      QNP
Sbjct: 427 QDSLPTISVPVPSEQPVVHSSPAIGGYTDGTVARFSIDPQNGSLNTPFQFDAI----QNP 482

Query: 438 LVSVPHEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEML 497
           L           + N+LALGPPQSS+  SQ    SN   +RG +DFFSEEEIR RSH+ML
Sbjct: 483 L----------GTNNLLALGPPQSSTPGSQGFCASNLNLHRGKDDFFSEEEIRTRSHDML 532

Query: 498 ENEDMQQHLLRIFNMGGQGHPSFNVAEDA---YPYSSPFMANPSPNYSFDDDSSRSSGKA 554
           ENEDMQQ LLRIFNMGGQG  S +V ED      Y      +PSPNYS  D+ SRSSGKA
Sbjct: 533 ENEDMQQ-LLRIFNMGGQGLSSNSVTEDGYPYSSYMPSPSPSPSPNYSLSDNPSRSSGKA 591

Query: 555 VVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS 588
           VVGWLKLKAALRWGIF+RKKAAERRAQLVELDDS
Sbjct: 592 VVGWLKLKAALRWGIFVRKKAAERRAQLVELDDS 625

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	588
TAIR|locus:2054000	622	AT2G18750 [Arabidopsis thalian	0.940	0.889	0.601	1.7e-171
TAIR|locus:2174522	647	AT5G57580 [Arabidopsis thalian	0.955	0.868	0.592	2.2e-169
TAIR|locus:2117557	601	AT4G25800 [Arabidopsis thalian	0.843	0.825	0.612	3.1e-154
TAIR|locus:2061112	599	AT2G24300 [Arabidopsis thalian	0.695	0.682	0.602	4.5e-152
TAIR|locus:2126679	562	AT4G31000 [Arabidopsis thalian	0.556	0.581	0.665	4.3e-147
TAIR|locus:505006222	451	SARD1 "AT1G73805" [Arabidopsis	0.557	0.727	0.459	1.6e-72
TAIR|locus:2148548	563	CBP60G "Cam-binding protein 60	0.556	0.580	0.410	3.9e-60

TAIR|locus:2054000 AT2G18750 [Arabidopsis thaliana (taxid:3702)]

 Score = 1667 (591.9 bits), Expect = 1.7e-171, P = 1.7e-171
 Identities = 343/570 (60%), Positives = 423/570 (74%)

Query:    20 VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTAI 79
             VSEEVERALAKLGPA+L+ RSSPKRIEG  GRNLQL FR+RLS+PLFTGGK+EGEQG AI
Sbjct:    65 VSEEVERALAKLGPARLSERSSPKRIEGIGGRNLQLQFRSRLSVPLFTGGKIEGEQGAAI 124

Query:    80 HIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLL 139
             H+VL+D  TGHV+T GPE+  KLDVVVL+GDFN EDDD W+ EEF  H+VKER+GKRPLL
Sbjct:   125 HVVLLDMTTGHVLTVGPEASAKLDVVVLDGDFNTEDDDGWSGEEFEGHLVKERQGKRPLL 184

Query:   140 SGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKD 199
             +GD+QVTLKEGVGTLG+L FTDNSSWIR RKFRLGL+V+SGYCEG+R+REAKT+AFTVKD
Sbjct:   185 TGDVQVTLKEGVGTLGELIFTDNSSWIRCRKFRLGLRVSSGYCEGMRVREAKTEAFTVKD 244

Query:   200 HRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNIL 259
             HRGELYKKHYPPAL+DEVWRLEKIGKDG+FHK+LNKAGI+ V++FLRL+V+DSQ+LR IL
Sbjct:   245 HRGELYKKHYPPALDDEVWRLEKIGKDGAFHKKLNKAGIYNVKEFLRLMVKDSQKLRTIL 304

Query:   260 GSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADS 319
             GSGMSN+MW+ L +H+KTCVLS  LYVYYP+D  +VGVVFNNIYEF GLI+  QY+ ADS
Sbjct:   305 GSGMSNRMWETLAEHSKTCVLSEMLYVYYPED--SVGVVFNNIYEFSGLISGKQYYPADS 362

Query:   320 LSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPFSQ 379
             LS++QK +VD LV+KAY+NW  VIEYD KSL+ F Q    D          P+  +    
Sbjct:   363 LSDNQKGYVDGLVRKAYENWEQVIEYDSKSLMNFNQVSKTDDIDYSMPVSVPSQPSTSYS 422

Query:   380 QLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINSQFDGTSFPQQNPLV 439
              + +   +       P   S L    Y     S F+ Q Q VN N+  +  S    N  V
Sbjct:   423 DVTVEAYNQSPASSFPGQ-SQLADTTYMHFGNSSFAPQDQLVN-NTH-ESQSMINSNGGV 479

Query:   440 SVP-HEAHIPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSHEMLE 498
              +    A   +++  L   PP+ +S  +    T N    RG++ F SEEEIR RS+EMLE
Sbjct:   480 RLALGPATGSQNQEQLVHPPPEINSY-NDWSNTCN----RGVDGFLSEEEIRARSNEMLE 534

Query:   499 NEDMQQHLLRIFNM-GGQGHPSFNVAEDAYPYSSPFMANPSPNYSFDDDSSRSSGKAVVG 557
             N+DMQQ LLR+F+M GG      N+ ED++ + S F      +Y  ++D S +SGKAVVG
Sbjct:   535 NDDMQQ-LLRLFSMNGGDQQTPLNMGEDSFGFHS-FGQTSMADY--EEDRS-NSGKAVVG 589

Query:   558 WLKLKAALRWGIFIRKKAAERRAQLVELDD 587
             WLK+KAA+RWG FIR+KAA+RRAQ+V+LD+
Sbjct:   590 WLKIKAAMRWGFFIRRKAAQRRAQIVQLDE 619

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2174522 AT5G57580 [Arabidopsis thaliana (taxid:3702)]

 Score = 1647 (584.8 bits), Expect = 2.2e-169, P = 2.2e-169
 Identities = 349/589 (59%), Positives = 424/589 (71%)

Query:    20 VSEEVERALAKLGPAKLTGRS--SPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGT 77
             VSEE+ERALAKLGPA+LTG S  SPKRIEGPDGR LQLHF++RLSLPLFTGGKVEGEQG 
Sbjct:    59 VSEELERALAKLGPARLTGSSGSSPKRIEGPDGRKLQLHFKSRLSLPLFTGGKVEGEQGA 118

Query:    78 AIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRP 137
              IH+VLIDANTG  V  GPE+  KL +VVLEGDFN EDD++WTQEEF SHVVKER GKRP
Sbjct:   119 VIHVVLIDANTGRAVVYGPEASAKLHIVVLEGDFNTEDDEDWTQEEFESHVVKERSGKRP 178

Query:   138 LLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTV 197
             LL+G++ VTLKEGVGTLG+L FTDNSSWIRSRKFRLGL+V SG C+G+RIREAKT+AF V
Sbjct:   179 LLTGEVYVTLKEGVGTLGELVFTDNSSWIRSRKFRLGLRVVSGCCDGMRIREAKTEAFVV 238

Query:   198 KDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRN 257
             KDHRGELYKKHYPPALND+VWRL+KIGKDG+FHK+L   GI TVEDFLR++V+DS +LR 
Sbjct:   239 KDHRGELYKKHYPPALNDDVWRLDKIGKDGAFHKKLTAEGINTVEDFLRVMVKDSPKLRT 298

Query:   258 ILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSA 317
             ILGSGMSNKMWD LV+HAKTCV S KLY+YY +D RNVGVVFNNIYE  GLI+  QY SA
Sbjct:   299 ILGSGMSNKMWDALVEHAKTCVQSSKLYIYYAEDSRNVGVVFNNIYELSGLISGDQYFSA 358

Query:   318 DSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNYTNPF 377
             DSL++SQKV+V+ LVKKAY+NW  VIEYDGKSLL   Q + +    T+ +       +  
Sbjct:   359 DSLTDSQKVYVEGLVKKAYENWNLVIEYDGKSLLDLKQPQRLSITHTNLENYSTAAIDHP 418

Query:   378 SQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNIN--SQFDGTSFP-Q 434
              Q +A  + S+P P + P + S   +GGY+  + +R+    Q +N N  +QF+  S    
Sbjct:   419 MQMVAGHSSSMP-PNQSPVL-SDFAIGGYDQTLATRYHSHPQLLNSNPRAQFEVASCSTS 476

Query:   435 QNPLVSVPHEAHIPRSE---NVLALGPPQSSSLVSQTIGTSN--PAPYRGIEDFFSEEEI 489
             Q+  +   H+     +    N LALGP QSS+   Q I  S+   A    +ED+ +  E 
Sbjct:   477 QDQFMGNLHQTQSTINNQHMNGLALGPSQSSTSGYQNINPSSVHQADLNHLEDWSNPRER 536

Query:   490 R---MRSHE--MLENEDM-----QQHLLRIFNMGGQGHPSFNVAEDAYPYSSP-FMANPS 538
                   S E   L + +M      Q  LR+F+MGG G+ S     +   Y+ P F+  P 
Sbjct:   537 GPDDFFSEEEIRLRSHEMLESEDMQQFLRLFSMGGGGNGSATHLPED-GYTFPSFLHTPM 595

Query:   539 PNYSFDDDSSRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDD 587
               Y  D+D  RS G+AVVGWLK+KAA+RWG FIR+KAAERRAQ+VELDD
Sbjct:   596 QGY--DEDRGRS-GRAVVGWLKIKAAMRWGFFIRRKAAERRAQIVELDD 641

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2117557 AT4G25800 [Arabidopsis thaliana (taxid:3702)]

 Score = 1504 (534.5 bits), Expect = 3.1e-154, P = 3.1e-154
 Identities = 319/521 (61%), Positives = 371/521 (71%)

Query:    20 VSEEVERALAKLGPAKLTGRS--SPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGT 77
             VSEEVERALAKL P +LT  S  SPKRI GPDGRNLQLHF++RLSLPLFTGG+VEGEQG 
Sbjct:    48 VSEEVERALAKLVPTRLTTSSVFSPKRIGGPDGRNLQLHFKSRLSLPLFTGGRVEGEQGA 107

Query:    78 AIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRP 137
              IH+VLIDANTG  VT GPE+ +KL+VVVL GDFNNEDD++WTQEEF SHVVKEREGKRP
Sbjct:   108 TIHVVLIDANTGRPVTVGPEASLKLEVVVLGGDFNNEDDEDWTQEEFESHVVKEREGKRP 167

Query:   138 LLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTV 197
             LL+GDL V LKEGVGTLG++ FTDNSSWIRSRKFRLGL+V SGYC+GIRIREAKT+AF+V
Sbjct:   168 LLTGDLFVVLKEGVGTLGEIVFTDNSSWIRSRKFRLGLRVPSGYCDGIRIREAKTEAFSV 227

Query:   198 KDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRN 257
             KDHRGELYKKHYPPALNDEVWRLEKIGKDG+FHKRL  AGI TVE FLR +VRDS +LR 
Sbjct:   228 KDHRGELYKKHYPPALNDEVWRLEKIGKDGAFHKRLTAAGIVTVEGFLRQLVRDSTKLRA 287

Query:   258 ILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSA 317
             ILGSGMSNKMWD+LV+HAKTCVLSGKLY+YY +D R+VGVVFNNIYE  GLI + QY SA
Sbjct:   288 ILGSGMSNKMWDLLVEHAKTCVLSGKLYIYYTEDSRSVGVVFNNIYELSGLITEDQYLSA 347

Query:   318 DSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAPPTDFQTGPPNY-TNP 376
             DSLSESQKV+VD LVKKAY+NW  V+EY+G+SLL   Q + +D   TD  T   +Y T P
Sbjct:   348 DSLSESQKVYVDGLVKKAYENWNQVVEYEGESLLNLNQPERLDISQTDPVTALASYSTVP 407

Query:   377 FSQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNINSQFDGTSFPQQN 436
              SQ    P  ++         +  LT       +P     Q   V    QF G   PQ  
Sbjct:   408 LSQ---FPEFAIE------GYNQTLTTA-----LPHNPQAQFDFVPQQDQFIGIQQPQTQ 453

Query:   437 PLVSVPHEAHIPRSENVLALGPPQS--SSLVSQTIGTSNPAPYRGIEDFFSEEEIRMRSH 494
               +   +   +       + G  Q   SS   + +            DFFSEEEIR  SH
Sbjct:   454 TNIENENVTRLVLGPPQSSTGGYQDIKSSADQENLNPFEDWTNLSENDFFSEEEIRQTSH 513

Query:   495 EMLENEDMQQHLLRIFNMGG-QGHPSFNVAEDAYPYSSPFM 534
             ++L NEDMQQ L   F+MGG +G   F     ++  ++P M
Sbjct:   514 DLLANEDMQQLL---FSMGGGKGEDGFTFP--SFMQNTPMM 549

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

TAIR|locus:2061112 AT2G24300 [Arabidopsis thaliana (taxid:3702)]

 Score = 1228 (437.3 bits), Expect = 4.5e-152, Sum P(2) = 4.5e-152
 Identities = 258/428 (60%), Positives = 311/428 (72%)

Query:    20 VSEEVERALAKLGPAKLTGRS-SPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTA 78
             VSEEVERAL++LG AKLT RS  PKRI+  +GRNLQLHFRTR+   LFTGGKVEGE+G+A
Sbjct:    55 VSEEVERALSRLGNAKLTSRSPEPKRIQDRNGRNLQLHFRTRMPPHLFTGGKVEGERGSA 114

Query:    79 IHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPL 138
             IH+VLIDANTG+VV TG ES  KL+VVVLEGDFN+EDD++WT+E F S  VKEREGKRP+
Sbjct:   115 IHVVLIDANTGNVVQTGEESASKLNVVVLEGDFNDEDDEDWTREHFESFEVKEREGKRPI 174

Query:   139 LSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVK 198
             L+GD Q+ LKEGVGTLG+LTFTDNSSWIRSRKFRLG+K ASGY +   IREAKT+ F VK
Sbjct:   175 LTGDTQIVLKEGVGTLGELTFTDNSSWIRSRKFRLGVKPASGYGDSFCIREAKTEPFAVK 234

Query:   199 DHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNI 258
             DHRGELYKKHYPPA++DEVWRL++I KDG  HK+L KA I TVEDFLRL+V+D Q+LRN+
Sbjct:   235 DHRGELYKKHYPPAVHDEVWRLDRIAKDGVLHKKLLKANIVTVEDFLRLLVKDPQKLRNL 294

Query:   259 LGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSAD 318
             LGSGMSN+MW+  V+HAKTCVL GKLYV+Y D     GVVFN+IYEF GLI +GQ+ S +
Sbjct:   295 LGSGMSNRMWENTVEHAKTCVLGGKLYVFYTDQTHATGVVFNHIYEFRGLITNGQFLSLE 354

Query:   319 SLSESQKVHVDTLVKKAYDNWMHVIEYDGKSL--LGFTQN--KSVDAPP-TDFQTGPP-- 371
             SL+  QK+  D LVK AY+NW   IEYDGK L  L   +   KS+  P     QT P   
Sbjct:   355 SLNHDQKISADILVKLAYENWHKAIEYDGKLLNCLPVAEKEIKSLLEPKMVSAQTAPNHQ 414

Query:   372 ---NYTNPFS---QQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPS-RFSLQSQNVNIN 424
                N  N  +    Q A+    VP P + P           N  +PS   ++Q  N ++ 
Sbjct:   415 QLHNQNNRQTVQGHQNAITYSPVPQPIDYPQFAQQHC----NQLLPSFPCNVQDYNRSME 470

Query:   425 SQFDGTSF 432
             S  D +S+
Sbjct:   471 SSNDSSSY 478

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

TAIR|locus:2126679 AT4G31000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1168 (416.2 bits), Expect = 4.3e-147, Sum P(3) = 4.3e-147
 Identities = 221/332 (66%), Positives = 271/332 (81%)

Query:    20 VSEEVERALAKLGPAKLTGRSS-PKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGTA 78
             VSEEVERA+++L  +K T RS+ P +I+G DGRNLQL FRTR+   LFTGGKVEGEQG+A
Sbjct:    59 VSEEVERAISRLENSKSTSRSTEPNKIQGLDGRNLQLRFRTRMPPHLFTGGKVEGEQGSA 118

Query:    79 IHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPL 138
             IH+VLIDANTG+V+ TG ES+ KL++VVL+GDFN+EDD +WT+E F S  VKEREGKRP+
Sbjct:   119 IHVVLIDANTGNVIQTGEESMTKLNIVVLDGDFNDEDDKDWTREHFESFEVKEREGKRPI 178

Query:   139 LSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVK 198
             L+GD  V +KEGVGTLG LTFTDNSSWIRSRKFRLG+K A+G+     IREAKT+ F VK
Sbjct:   179 LTGDRHVIIKEGVGTLGKLTFTDNSSWIRSRKFRLGVKPATGF----HIREAKTEPFAVK 234

Query:   199 DHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNI 258
             DHRGELYKKHYPP L+DEVWRL+KI KDG+ HK+L K+ I TVEDFL+++++D Q+LR++
Sbjct:   235 DHRGELYKKHYPPVLHDEVWRLDKIAKDGALHKKLLKSNIVTVEDFLQILMKDPQKLRSL 294

Query:   259 LGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHSAD 318
             LGSGMSN+MWD  V+HAKTCVL GKLY YY D      VVFN+IYEF GLIA+G + S++
Sbjct:   295 LGSGMSNRMWDNTVEHAKTCVLGGKLYAYYTDQTHQTAVVFNHIYEFQGLIANGHFLSSE 354

Query:   319 SLSESQKVHVDTLVKKAYDNWMHVIEYDGKSL 350
             SL+  QK+  DTLVK AY+NW  V+EY GK L
Sbjct:   355 SLNHDQKISADTLVKTAYENWHKVVEYGGKLL 386

GO:0005634 "nucleus" evidence=ISM

GO:0005516 "calmodulin binding" evidence=ISS

TAIR|locus:505006222 SARD1 "AT1G73805" [Arabidopsis thaliana (taxid:3702)]

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 159/346 (45%), Positives = 216/346 (62%)

Query:    20 VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRN--LQLHFRTRLSLPLFTGGKVEGEQGT 77
             V +EVE  ++K    +L+ RSS  RIE P+     L+L FR  L  P+FTG K+      
Sbjct:    58 VRQEVEYGISKR--FRLS-RSSSFRIEAPEATTPTLKLIFRKNLMTPIFTGSKISDVDNN 114

Query:    78 AIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRP 137
              + I+L+D +   V    P   +KLD+V L GDF +   D WT +EF S+++KER+GKRP
Sbjct:   115 PLEIILVDDSNKPVNLNRP---IKLDIVALHGDFPS--GDKWTSDEFESNIIKERDGKRP 169

Query:   138 LLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYC-EGIRIREAKTDAFT 196
             LL+G++ VT++ GV T+G++ FTDNSSWIRSRKFR+G KVA G   +G+ + EA T+A  
Sbjct:   170 LLAGEVSVTVRNGVATIGEIVFTDNSSWIRSRKFRIGAKVAKGSSGQGVVVCEAMTEAIV 229

Query:   197 VKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLR 256
             V+DHRGELYKKH+PP L DEVWRLEKIGKDG+FHK+L+   I TV+DFL+L V D   LR
Sbjct:   230 VRDHRGELYKKHHPPMLEDEVWRLEKIGKDGAFHKKLSSRHINTVQDFLKLSVVDVDELR 289

Query:   257 NILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHS 316
              ILG GMS++ W+V + HA+ C+L  KLY+     P N  ++ N I E    + DG  H 
Sbjct:   290 QILGPGMSDRKWEVTLKHARECILGNKLYI--SRGP-NFFMILNPICEVMKALIDG--HV 344

Query:   317 ADSLSESQKVHVDTLVKKAYD--NWMHVIEYDGKSLLGFTQNKSVD 360
               S     + +V  LV+ AY   N++ V E         TQ   +D
Sbjct:   345 LSSQESLNQPYVKNLVRDAYSKGNFLEVGERTANEAALLTQGDDLD 390

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0010112 "regulation of systemic acquired resistance" evidence=IGI

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0080142 "regulation of salicylic acid biosynthetic process" evidence=IGI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0001666 "response to hypoxia" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2148548 CBP60G "Cam-binding protein 60-like G" [Arabidopsis thaliana (taxid:3702)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 142/346 (41%), Positives = 204/346 (58%)

Query:    20 VSEEVERALAKLGPAKLTGRSSPKRIEGPDGRN-LQLHFRTRLSLPLFTGGKVEGEQGTA 78
             V EE++R+L     +         R E P  R+ L+L F       +FTG K+E E G+ 
Sbjct:    53 VREEIQRSLQPFLSSSCVSMER-SRSETPSSRSRLKLCFINSPPSSIFTGSKIEAEDGSP 111

Query:    79 IHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPL 138
             + I L+DA T  +V+TGP S  ++++V L  DF  E   +WT E F  +++ +REGKRPL
Sbjct:   112 LVIELVDATTNTLVSTGPFSSSRVELVPLNADFTEE---SWTVEGFNRNILTQREGKRPL 168

Query:   139 LSGDLQVTLKEGVGTL-GDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTV 197
             L+GDL V LK GVG + GD+ F+DNSSW RSRKFRLG K+     +G    EA+++AF  
Sbjct:   169 LTGDLTVMLKNGVGVITGDIAFSDNSSWTRSRKFRLGAKLTG---DGAV--EARSEAFGC 223

Query:   198 KDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRN 257
             +D RGE YKKH+PP  +DEVWRLEKI KDG    RL +  I TV+DF RL   +   L N
Sbjct:   224 RDQRGESYKKHHPPCPSDEVWRLEKIAKDGVSATRLAERKILTVKDFRRLYTVNRNELHN 283

Query:   258 ILGSGMSNKMWDVLVDHAKTCVLSG-KLYVYYPDDPRNVGVVFNNIYEFCGLIADGQYHS 316
             I+G+G+S K W+ +V HA  CVL   + Y+Y  + P  V ++FN++YE   +  +G    
Sbjct:   284 IIGAGVSKKTWNTIVSHAMDCVLDETECYIYNANTP-GVTLLFNSVYELIRVSFNGN--- 339

Query:   317 ADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGFTQNKSVDAP 362
              D  +  Q + +D L  +AY N   +   + ++ +G  Q +S+  P
Sbjct:   340 -DIQNLDQPI-LDQLKAEAYQNLNRITAVNDRTFVGHPQ-RSLQCP 382


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      588       588   0.00083  120 3  11 22  0.43    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  627 (67 KB)
  Total size of DFA:  340 KB (2170 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  58.26u 0.09s 58.35t   Elapsed:  00:00:04
  Total cpu time:  58.27u 0.09s 58.36t   Elapsed:  00:00:04
  Start:  Fri May 10 20:30:08 2013   End:  Fri May 10 20:30:12 2013

GO:0005634 "nucleus" evidence=ISM

GO:0005516 "calmodulin binding" evidence=ISS;IDA

GO:0002237 "response to molecule of bacterial origin" evidence=IEP;RCA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA;IMP

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0010112 "regulation of systemic acquired resistance" evidence=IGI

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0080142 "regulation of salicylic acid biosynthetic process" evidence=IGI

GO:0071456 "cellular response to hypoxia" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	588
pfam07887	301	pfam07887, Calmodulin_bind, Calmodulin binding pro	1e-173

>gnl|CDD|219620 pfam07887, Calmodulin_bind, Calmodulin binding protein-like

 Score =  491 bits (1266), Expect = e-173
 Identities = 186/302 (61%), Positives = 233/302 (77%), Gaps = 2/302 (0%)

Query: 52  NLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDF 111
            L+L F  +LSLP+FTG K+E E G  I I L+DANTG  VT+GP S  KL+VVVL GDF
Sbjct: 1   RLKLVFLNKLSLPIFTGSKIEAEDGAPIKIALVDANTG--VTSGPLSSAKLEVVVLHGDF 58

Query: 112 NNEDDDNWTQEEFVSHVVKEREGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKF 171
           N+EDD+NWT+EEF  ++VKEREGKRPLL+GD+ VTLK GV  +G++ FTDNSSW RSRKF
Sbjct: 59  NSEDDENWTEEEFNKNIVKEREGKRPLLTGDVTVTLKNGVAVIGEIFFTDNSSWTRSRKF 118

Query: 172 RLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHK 231
           RLG +V  G  +G+R+REA T++F VKDHRGELYKKH+PP+L DEVWRLEKIGKDG+FHK
Sbjct: 119 RLGARVVDGSYDGVRVREAVTESFVVKDHRGELYKKHHPPSLEDEVWRLEKIGKDGAFHK 178

Query: 232 RLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDD 291
           RL  +GI TV+DFLRL+ RD  +LR ILGSGMSNKMW+  + HAKTCVL  K Y+Y P  
Sbjct: 179 RLTASGINTVKDFLRLLHRDPNKLRQILGSGMSNKMWETTISHAKTCVLGDKCYIYRPAS 238

Query: 292 PRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLL 351
            +NVG+ FN++YE  G+  DG Y  A++LSE Q+  V+ LVK+AY NW ++ EYD + L 
Sbjct: 239 EKNVGLFFNSVYELVGVSFDGSYVPANNLSELQQAAVNQLVKQAYQNWNNIEEYDHEMLN 298

Query: 352 GF 353
            +
Sbjct: 299 NY 300

The members of this family are putative or actual calmodulin binding proteins expressed by various plant species. Some members , are known to be involved in the induction of plant defence responses. However, their precise function in this regards is as yet unknown. Length = 301

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	588
PF07887	299	Calmodulin_bind: Calmodulin binding protein-like;	100.0
TIGR02239	316	recomb_RAD51 DNA repair protein RAD51. This eukary	86.18
TIGR02238	313	recomb_DMC1 meiotic recombinase Dmc1. This model d	84.41
PLN03186	342	DNA repair protein RAD51 homolog; Provisional	84.15

>PF07887 Calmodulin_bind: Calmodulin binding protein-like; InterPro: IPR012416 The members of this family are putative or actual calmodulin binding proteins expressed by various plant species

Probab=100.00  E-value=3.4e-122  Score=935.92  Aligned_cols=299  Identities=69%  Similarity=1.159  Sum_probs=295.2

Q ss_pred             ceEEEEcCCCCCCcccCCcccccCCCceEEEEEeCCCCceeccCCCccceEEEEEeeCCCCCCCCCCCCHHHHhhccccc
Q 007813           52 NLQLHFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTTGPESLVKLDVVVLEGDFNNEDDDNWTQEEFVSHVVKE  131 (588)
Q Consensus        52 ~~qL~F~n~l~~pifTg~kI~ae~g~~I~V~L~D~~tg~iVt~GplSs~kvEIvVLdGDF~~~~~e~WT~eEF~~~IVk~  131 (588)
                      +|||+|+|+|++|||||++|+|+||+||+|+|+|++|+  |++||+|++|||||||||||+++++++||+|||++|||++
T Consensus         1 ~~~L~F~n~l~~pifT~~~i~a~~g~~i~V~l~d~~~~--v~~g~lss~kieIvvLdGdF~~~~~~~wT~eeF~~~iv~~   78 (299)
T PF07887_consen    1 NLQLRFLNKLSLPIFTGSKIEAEDGAPIKVALVDANTG--VTSGPLSSAKIEIVVLDGDFNDEDCEDWTEEEFNSHIVKE   78 (299)
T ss_pred             CeEEEecCCCCCCcccCCceEecCCCcEEEEEEECCCC--ccCCCCCCcEEEEEEEccccCCCccCCCCHHHHhhcEeec
Confidence            58999999999999999999999999999999999988  9999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccceEEEecCceeeccCeEeecCCCcccccccEEEEEeecCCCCcceeeeecccceEEeeCCccccccCCCC
Q 007813          132 REGKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYPP  211 (588)
Q Consensus       132 ReGk~pLL~Gdl~v~L~~Gva~l~di~FTDnSsw~rSrKFRLgaRv~~~~~~g~RI~EAvsE~FvVkDhRge~ykKh~pP  211 (588)
                      |+||+|||+|+|+|+|+||+|+|+||+|||||||+|||||||||||+++++.|+|||||+||||+|||||||+|||||||
T Consensus        79 r~gk~pLL~G~~~v~L~~G~a~l~di~FtdnSs~~rsrKFRLgarv~~~~~~~~rI~Eavse~FvVkd~Rge~~kKh~pP  158 (299)
T PF07887_consen   79 REGKRPLLTGDLQVTLKNGVATLGDISFTDNSSWIRSRKFRLGARVVSGSCDGVRIREAVSEPFVVKDHRGELYKKHYPP  158 (299)
T ss_pred             CCCCCCCCCccEEEEecCCEEEccccEEecCcccccCCcEEEEEEEccCCCCCceeEEeeecCEEEEecccccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccceeeeeeccCchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHccCCCchhHHHHHHhhcccccCCceEEEeeCC
Q 007813          212 ALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDD  291 (588)
Q Consensus       212 ~L~DeVwRLekIgKdG~~hkrL~~~gI~tV~dFLrl~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl~~k~y~y~~~~  291 (588)
                      +|+|||||||||||||+|||+|+++||+||+|||+++++||++||+|||+|||++||++||+|||||++++++|+|| ++
T Consensus       159 ~L~DeVwRLe~Igk~G~~hk~L~~~~I~tV~dFl~l~~~d~~~Lr~ilg~~ms~k~We~~v~HA~tCvl~~~~y~y~-~~  237 (299)
T PF07887_consen  159 SLDDEVWRLEKIGKDGAFHKRLKKNGINTVEDFLKLLNKDPQKLREILGSGMSNKMWETTVEHAKTCVLGDKLYVYY-DE  237 (299)
T ss_pred             CCCCchhhhhhccccCHHHHHHHHcCCccHHHHHHHHhcCHHHHHHHHhcCCChhhHHHHHHHHHhcCCCCcEEEEE-ec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999 56


Q ss_pred             CCceEEEEccccceeeeecCCeeecCCCCChHhHHHHHHHHHHHHhcccceecccCcccCCc
Q 007813          292 PRNVGVVFNNIYEFCGLIADGQYHSADSLSESQKVHVDTLVKKAYDNWMHVIEYDGKSLLGF  353 (588)
Q Consensus       292 ~~nvgl~FN~i~~lvG~~~~g~y~s~d~L~~~qk~~V~~Lk~~AY~nw~~~~e~D~~~l~n~  353 (588)
                      ++|++|+|||||+||||+|+|+|++.|+||+.||++|++||++||+||++|++||++|++||
T Consensus       238 ~~nv~l~FN~i~~lvga~~~g~y~s~d~L~~~qK~~v~~Lv~~AY~n~~~l~e~d~~~~~n~  299 (299)
T PF07887_consen  238 EQNVGLFFNCIYELVGAIFGGQYVSLDNLSSAQKAYVDKLVKQAYENWDNLEEYDGKMLNNY  299 (299)
T ss_pred             CCceEEEEcchhhEEeEEECCEEEehHHcCHHHHHHHHHHHHHHHHhhhhheecccchhccC
Confidence            78999999999999999999999999999999999999999999999999999999999986

Some members (for example, Q8H6T7 from SWISSPROT), are known to be involved in the induction of plant defence responses []. However, their precise function in this regard is as yet unknown.

>TIGR02239 recomb_RAD51 DNA repair protein RAD51

Probab=86.18  E-value=0.76  Score=48.47  Aligned_cols=50  Identities=30%  Similarity=0.353  Sum_probs=43.7

Q ss_pred             hhhhhhhhcCCccHHHHHHHHhhChHHHHHHHccCCCchhHHHHHHhhcccccCC
Q 007813          228 SFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSG  282 (588)
Q Consensus       228 ~~hkrL~~~gI~tV~dFLrl~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl~~  282 (588)
                      .--++|+++||.||+||+.   .++..|.+++  |+|...++.+.+||.+|....
T Consensus        12 ~~~~~l~~~g~~t~~~~~~---~~~~~L~~i~--~ls~~~~~~~~~~~~~~~~~~   61 (316)
T TIGR02239        12 ADIKKLQEAGLHTVESVAY---APKKQLLEIK--GISEAKADKILAEAAKLVPMG   61 (316)
T ss_pred             HHHHHHHHcCCCcHHHHHh---CCHHHHHHHh--CCCHHHHHHHHHHHHHhcccc
Confidence            3568999999999999986   4899999998  799999999999999996543

This eukaryotic sequence family consists of RAD51, a protein involved in DNA homologous recombination and repair. It is similar in sequence the exclusively meiotic recombinase DMC1 (TIGR02238), to archaeal families RadA (TIGR02236) and RadB (TIGR02237), and to bacterial RecA (TIGR02012).

>TIGR02238 recomb_DMC1 meiotic recombinase Dmc1

Probab=84.41  E-value=0.97  Score=47.72  Aligned_cols=50  Identities=28%  Similarity=0.356  Sum_probs=43.3

Q ss_pred             hhhhhhhhcCCccHHHHHHHHhhChHHHHHHHccCCCchhHHHHHHhhcccccCC
Q 007813          228 SFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSG  282 (588)
Q Consensus       228 ~~hkrL~~~gI~tV~dFLrl~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl~~  282 (588)
                      .--++|+++||.||+||+.   .++..|.++.  |+|...++.+++.|+.+...+
T Consensus        12 ~~~~~L~~~g~~t~~~~~~---~~~~~L~~~~--gls~~~~~~i~~~~~~~~~~~   61 (313)
T TIGR02238        12 ADIKKLKSAGICTVNGVIM---TTRRALCKIK--GLSEAKVDKIKEAASKIINPG   61 (313)
T ss_pred             HHHHHHHHcCCCcHHHHHh---CCHHHHHHhc--CCCHHHHHHHHHHHHhhhccc
Confidence            3558999999999999876   4899999997  799999999999999886553

This model describes DMC1, a subfamily of a larger family of DNA repair and recombination proteins. It is eukaryotic only and most closely related to eukaryotic RAD51. It also resembles archaeal RadA (TIGR02236) and RadB (TIGR02237) and bacterial RecA (TIGR02012). It has been characterized for human as a recombinase active only in meiosis.

>PLN03186 DNA repair protein RAD51 homolog; Provisional

Probab=84.15  E-value=1  Score=48.28  Aligned_cols=62  Identities=27%  Similarity=0.314  Sum_probs=49.0

Q ss_pred             cceeeeeeccCchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHccCCCchhHHHHHHhhcccccCC
Q 007813          216 EVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVLSG  282 (588)
Q Consensus       216 eVwRLekIgKdG~~hkrL~~~gI~tV~dFLrl~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl~~  282 (588)
                      ++-+|+.-|-.-.--++|+++||.||+||+..   ++..|.+|.  |+|....+.+++||.+|....
T Consensus        27 ~~~~l~~~gi~~~~i~kL~~~g~~T~~~~~~~---~~~~L~~i~--~is~~~~~~~~~~~~~~~~~~   88 (342)
T PLN03186         27 PIEQLQASGIAALDIKKLKDAGIHTVESLAYA---PKKDLLQIK--GISEAKVEKILEAASKLVPLG   88 (342)
T ss_pred             cHHHHHhCCCCHHHHHHHHHcCCCcHHHHHhC---CHHHHHHhc--CCCHHHHHHHHHHHHHhcccc
Confidence            34455443333456789999999999998764   788999998  799999999999998886544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	588
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 69.9 bits (170), Expect = 1e-12
 Identities = 74/452 (16%), Positives = 138/452 (30%), Gaps = 132/452 (29%)

Query: 103 DVV-VLEGDFNNEDDDNWTQEEFVSHVVKEREGKRPLLSGD-----------LQVTLKEG 150
           D++ V E  F  ++ D    ++    ++ + E    ++S D           L    +E 
Sbjct: 20  DILSVFEDAFV-DNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM 78

Query: 151 VGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTDAFTVKDHRGELYKKHYP 210
           V    +     N  ++ S                 R     T  +   + R  LY  +  
Sbjct: 79  VQKFVEEVLRINYKFLMSP-----------IKTEQRQPSMMTRMYI--EQRDRLYNDN-Q 124

Query: 211 PALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGM--SNKMW 268
                 V RL+   K                   LR  + + +  +N+L  G+  S K W
Sbjct: 125 VFAKYNVSRLQPYLK-------------------LRQALLELRPAKNVLIDGVLGSGKTW 165

Query: 269 ---DVLVDHAKTCVLSGKLY---VYYPDDPRNVGVVFNNIYEFCGLIADGQYHSADSLSE 322
              DV + +   C +  K++   +   + P  V  +   +        D  + S    S 
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL----YQIDPNWTSRSDHSS 221

Query: 323 SQKVHVDT--------LVKKAYDNWMHVIE--YDGKSLLGF---------TQNKSVDAPP 363
           + K+ + +        L  K Y+N + V+    + K+   F         T+ K V    
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV---- 277

Query: 364 TDFQTGPPNYTNPFSQQLALPTLSVPVPPEQPSMDSGLTVGGYNDGIPSRFSLQSQNVNI 423
           TDF +     T   S      TL+   P E                     SL  + ++ 
Sbjct: 278 TDFLSA--ATTTHISLDHHSMTLT---PDE--VK-----------------SLLLKYLDC 313

Query: 424 NSQFDGTSFPQQNPLVSVPHEAH--IPRSENVLALGPPQSSSLVSQTIGTSNPAPYRGIE 481
             Q              +P E     PR  +++A         +   + T +   +   +
Sbjct: 314 RPQ-------------DLPREVLTTNPRRLSIIA-------ESIRDGLATWDNWKHVNCD 353

Query: 482 DFFSEEEIRMRSHEMLENEDMQQHL--LRIFN 511
                  I   S  +LE  + ++    L +F 
Sbjct: 354 KL---TTIIESSLNVLEPAEYRKMFDRLSVFP 382

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 4e-06
 Identities = 90/591 (15%), Positives = 167/591 (28%), Gaps = 223/591 (37%)

Query: 15  FDFEQVSEEVERALAKLGPAKLTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGE 74
           FD + V +  +  L+K     +    S   +             T     LF        
Sbjct: 33  FDCKDVQDMPKSILSKEEIDHIIM--SKDAVS-----------GTLR---LFW------- 69

Query: 75  QGTAIHIVLIDANTGHVVTTGPESLVKLDVV-VLEGDFNNEDDDNWTQEEFVSHVVKERE 133
                            + +  E +V+  V  VL  ++       +           + E
Sbjct: 70  ----------------TLLSKQEEMVQKFVEEVLRINY------KFLMSPI------KTE 101

Query: 134 GKRPLLSGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGYCEGIRIREAKTD 193
            ++P +   + +  +       D  + DN                               
Sbjct: 102 QRQPSMMTRMYIEQR-------DRLYNDN------------------------------- 123

Query: 194 AFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQ 253
                    +++ K+        V RL+   K                   LR  + + +
Sbjct: 124 ---------QVFAKYN-------VSRLQPYLK-------------------LRQALLELR 148

Query: 254 RLRNILGSGM--SNKMW---DVLVDHAKTCVLSGKLY---VYYPDDPRNVGVVFNNIYEF 305
             +N+L  G+  S K W   DV + +   C +  K++   +   + P  V  +   +   
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL-- 206

Query: 306 CGLIADGQYHSADSLSESQKVHVDT--------LVKKAYDNWMHVIE--YDGKSLLGF-- 353
                D  + S    S + K+ + +        L  K Y+N + V+    + K+   F  
Sbjct: 207 --YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264

Query: 354 -------TQNKSVDAPPTDFQTG-----------PPNYTNPFSQQLALPTLSVPVP--PE 393
                  T+ K V    TDF +                T    + L L  L       P 
Sbjct: 265 SCKILLTTRFKQV----TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 394 QPSMDSGLTVGG----YNDGIPSRFSLQSQNVNIN--SQFDGTSFPQQNP---------L 438
           +    +   +        DG  + +    ++VN +  +    +S     P         L
Sbjct: 321 EVLTTNPRRLSIIAESIRDG-LATWD-NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378

Query: 439 VSVPHEAHIPRSENVLAL----GPPQ----------SSSLVSQTIGTSNPAPYR-GIEDF 483
              P  AHIP    +L+L                    SLV +      P      I   
Sbjct: 379 SVFPPSAHIP--TILLSLIWFDVIKSDVMVVVNKLHKYSLVEK-----QPKESTISIPS- 430

Query: 484 FSEEEIRMRSHEMLENE-DMQQHLLRIFNMGGQGHPSFNVA---EDAYPYS 530
                I +     LENE  + + ++  +N+  +   S ++     D Y YS
Sbjct: 431 -----IYLELKVKLENEYALHRSIVDHYNI-PKTFDSDDLIPPYLDQYFYS 475

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	588
1wcn_A	70	Transcription elongation protein NUSA; RNA-binding	91.69
2kz3_A	83	Putative uncharacterized protein RAD51L3; RAD51D,	86.42

>1wcn_A Transcription elongation protein NUSA; RNA-binding protein, escherichia coli NUSA, transcription regulation, regulation of RNA binding; NMR {Escherichia coli} PDB: 2jzb_B

Probab=91.69  E-value=0.034  Score=45.56  Aligned_cols=62  Identities=24%  Similarity=0.440  Sum_probs=51.2

Q ss_pred             CCccceeeeeeccCchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHccCCCchhHHHHHHhhcc-cccC
Q 007813          213 LNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKT-CVLS  281 (588)
Q Consensus       213 L~DeVwRLekIgKdG~~hkrL~~~gI~tV~dFLrl~~~d~~kLR~iLg~gmS~k~We~~v~HAkt-Cvl~  281 (588)
                      ..|++-.|++|+..-+  ++|.++||+||+|+..   .+.+.|-.|.  |+|...=+.++.-|+. |-+.
T Consensus         5 ~~~~l~~L~Gi~~~~~--~kL~e~Gi~TvedlA~---~~~~eL~~i~--gise~kA~~ii~aAr~~~w~~   67 (70)
T 1wcn_A            5 PADDLLNLEGVDRDLA--FKLAARGVCTLEDLAE---QGIDDLADIE--GLTDEKAGALIMAARNICWFG   67 (70)
T ss_dssp             CCHHHHSSTTCCHHHH--HHHHTTTCCSHHHHHT---SCHHHHHTSS--SCCHHHHHHHHHHHHHHHTTC
T ss_pred             hhhHHHHcCCCCHHHH--HHHHHcCCCcHHHHHc---CCHHHHHHcc--CCCHHHHHHHHHHHHHccCcc
Confidence            4567778888877655  8999999999998765   4788898887  7999999999999998 7553

>2kz3_A Putative uncharacterized protein RAD51L3; RAD51D, homologous recombination, unknown function; NMR {Homo sapiens}

Probab=86.42  E-value=0.55  Score=39.82  Aligned_cols=40  Identities=25%  Similarity=0.202  Sum_probs=30.7

Q ss_pred             hhhhhhcCCccHHHHHHHHhhChHHHHHHHccCCCchhHHHHHHh
Q 007813          230 HKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDH  274 (588)
Q Consensus       230 hkrL~~~gI~tV~dFLrl~~~d~~kLR~iLg~gmS~k~We~~v~H  274 (588)
                      -++|.+++|.||+||+.   .|+.+|-+++  |+|-+.=-.+..|
T Consensus        17 ~~~L~~~~I~Tv~Dfl~---~d~~eL~~~~--~ls~~~v~~l~r~   56 (83)
T 2kz3_A           17 IQLLRSHRIKTVVDLVS---ADLEEVAQKC--GLSYKALVALRRV   56 (83)
T ss_dssp             HHHHHHTTCCCHHHHTT---SCHHHHHHHH--TCCHHHHHHHHHH
T ss_pred             HHHHHHCCCCCHHHHHh---CCHHHHHHHh--CCCHHHHHHHHHH
Confidence            47899999999999975   7999999998  4565544444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	588
d1szpa1	64	DNA repair protein Rad51, N-terminal domain {Baker	89.1

>d1szpa1 a.60.4.1 (A:81-144) DNA repair protein Rad51, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: SAM domain-like
superfamily: Rad51 N-terminal domain-like
family: DNA repair protein Rad51, N-terminal domain
domain: DNA repair protein Rad51, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.10  E-value=0.061  Score=41.59  Aligned_cols=52  Identities=27%  Similarity=0.313  Sum_probs=43.5

Q ss_pred             eeccCchhhhhhhhcCCccHHHHHHHHhhChHHHHHHHccCCCchhHHHHHHhhccccc
Q 007813          222 KIGKDGSFHKRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVDHAKTCVL  280 (588)
Q Consensus       222 kIgKdG~~hkrL~~~gI~tV~dFLrl~~~d~~kLR~iLg~gmS~k~We~~v~HAktCvl  280 (588)
                      +||...+  ++|.++|++||++..   +..++.|-+|-  |++.+.=+.+++-|++++.
T Consensus        10 Gig~~~~--~kL~~aG~~Tve~ia---~~t~~~L~~i~--Gi~e~~a~KIi~~A~k~~~   61 (64)
T d1szpa1          10 GITMADV--KKLRESGLHTAEAVA---YAPRKDLLEIK--GISEAKADKLLNEAARLVP   61 (64)
T ss_dssp             TCCHHHH--HHHHTTSCCSHHHHH---HSCSHHHHTST--TCCHHHHHHHHHHHHHHSC
T ss_pred             CCCHHHH--HHHHHcCCCcHHHHH---hCCHHHHHHcC--CCCHHHHHHHHHHHHHHcC
Confidence            5666555  899999999999874   56777888885  8999999999999998764