Citrus Sinensis ID: 007956

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580---
MEVRRRSIAAAKPVHSKTIEEEETHAQLPLPLYIINALFFTLFFTVVYYLLSRWREKIRNSTPLHVVTLSEMVAIVAFVASCIYLLGFFGIDFVQSILRPSADVWASEDLEEEDSHVIIKDDSRNLPCGQALDCSHVMTLPQPQPQPQPLPSLIIDHDPNTLTFTTEEDEEMIKSVVDGTTPSYSLESKLGDCRRAAAIRREALQRSTGKSLHGLPLEGFDYGSILGQCCEMPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLRFTCSTGDAMGMNMVSKGVQNVLDFLQAEFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKGDVVRKVLKTNVDALVELNMLKNLTGSAMAGALGGFNAHASNIVTAVYIATGQDPAQNVESSHCITMMEAINDGKDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANKESPGANSRLLATIVAGSVLAGELSLMSALAAGQLVKSHMKYNRSSKDVTKASS
cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHccccccccEEEEEcccEEEccEEEccEEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEcccEEEccEEECccHHHHHHHHHHcccccccccHHHHHccccccEEEEEEEEEEEccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEECcccccccccccEEEEEccccEEEcEEEEcHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccHHHHccccEEEEEEECcccccEEEEEEcccEEEEEEccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccc
**************************QLPLPLYIINALFFTLFFTVVYYLLSRWREKIRNSTPLHVVTLSEMVAIVAFVASCIYLLGFFGIDFVQSILRPS*****************IK******P******************************************EEMIKSVVDGTTPSYSLESKLGDCRRAAAIRREALQRSTGKSLHGLPLEGFDYGSILGQCCEMPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLRFTCSTGDAMGMNMVSKGVQNVLDFLQAEFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKGDVVRKVLKTNVDALVELNMLKNLTGSAMAGALGGFNAHASNIVTAVYIATGQDPAQNVESSHCITMMEAINDGKDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGA*K****ANSRLLATIVAGSVLAGELSLMSALAAGQLVKSHMK*************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEVRRRSIAAAKPVHSKTIEEEETHAQLPLPLYIINALFFTLFFTVVYYLLSRWREKIRNSTPLHVVTLSEMVAIVAFVASCIYLLGFFGIDFVQSILRPSADVWASEDLEEEDSHVIIKDDSRNLPCGQALDCSHVMTLPQPQPQPQPLPSLIIDHDPNTLTFTTEEDEEMIKSVVDGTTPSYSLESKLGDCRRAAAIRREALQRSTGKSLHGLPLEGFDYGSILGQCCEMPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASANRGCKAIHLSGGATSVLLKDGMTRAPVVRFGSAKRAAELKLFLENPVNFDPLSMVFNKSSRFARLQAIKCAIAGKNLYLRFTCSTGDAMGMNMVSKGVQNVLDFLQAEFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKGDVVRKVLKTNVDALVELNMLKNLTGSAMAGALGGFNAHASNIVTAVYIATGQDPAQNVESSHCITMMEAINDGKDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANKESPGANSRLLATIVAGSVLAGELSLMSALAAGQLVKSHMKYNRSSKDVTKASS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants.confidentQ9XHL5
3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants.confidentP14891
3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants.probableQ41437

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.1.-15-hydroxyprostaglandin dehydrogenase (NAD(+)).probable
1.1.1.34Hydroxymethylglutaryl-CoA reductase (NADPH).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2R4F, chain A
Confidence level:very confident
Coverage over the Query: 166-562
View the alignment between query and template
View the model in PyMOL