Citrus Sinensis ID: 008021

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-
Protein Sequence
MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFGVIESMLMEMFAL
Secondary Structure (PSIPRED)
cccEEEEcHHHHHHHHHHHccccccccccccccEEEccccccHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHcccccccHHHHHHHHHHHEEEccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccEEEccccccccccccEEEEccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccHHcccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHccccccccEcccccEEEccccccccEEEEEcEccccccccHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHcccEEEEccHHHccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHccccccEEEEHHHHHEEEEccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccEEEEEEEccccHHHHHHHHHHccccHHHHHHHccEEEEEEEEcccccccccccccEEEccccccccccccccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHcccEEEEcccHccc
Coil and Loop (DISEMBL)
MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVpyyrfyshygfpsgghcsvpvynvkqLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLAltrspllvpgiiaFTSGQLAWAQRVSAeteyfpsqnafytraqdgHAFVTSVLYSLVECVILLMRALYLgvlfspsimmapfadsfgpqFRELWLHVVLRTLETagpafikwgqwaatrpdlfprDLCKKLselhskapehsfaYTKKTIERAFGRRLSEifdgfeeapvasgsIAQVHRASlrfrypgqkvkpIVVAVKvrhpgvgesirRDFVIINLAAKissvipavkwlRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFrrwkdvsfpkpvyplvhpAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVdnfihadmhpgNILVRVAQKKssqkrlfrskphvifldvgmtaelsktDRVNLVEFFKAVARRDGRTAAECTLRLskqqncpnpkAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFGVIESMLMEMFAL
Flexible Loop (DISEMBL)
MSRVLTFRNIWRAAQSvltnergyhseltKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSElhskapehsfaytkKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLrfrypgqkvkpiVVAVKvrhpgvgesirrdFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKkssqkrlfrskphvifldvgmtaelsktdrvNLVEFFKAVARRDGRTAAEctlrlskqqncpnpKAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFGVIESMLMEMFAL
Low Complexity Region (SEG)
MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQllcrscsvrslsvasassvaTHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFGVIESMLMEMFAL
Disordered region (IsUnstruct)
***VLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH****EHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ******RLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFGVIESMLME****
Disordered Region (DISOPRED)
**R****RNIWRAAQS***************GAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVR************HQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSG**********************TRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFGVIESMLMEMFAL
Disordered Region (DISEMBL)
MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVR*************QAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV*********LFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFGVIESMLMEMFAL
Disordered Region (DISPRO)
*SRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFGVIESMLMEMF**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFGVIESMLMEMFAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	581	2.2.26 [Sep-21-2011]
Q55G83	689	Probable serine/threonine	yes	no	0.595	0.502	0.361	4e-71
Q9P7M0	692	ABC1 family protein C21C3	yes	no	0.590	0.495	0.325	4e-54
Q02981	657	ABC1 family protein YPL10	yes	no	0.600	0.531	0.306	6e-53
Q7Z695	626	Uncharacterized aarF doma	yes	no	0.426	0.396	0.374	3e-38
Q6NSR3	617	Uncharacterized aarF doma	yes	no	0.406	0.382	0.342	3e-35
A1TTA2	522	Probable ubiquinone biosy	yes	no	0.480	0.534	0.352	9e-35
C5CWY2	521	Probable ubiquinone biosy	yes	no	0.557	0.621	0.310	2e-34
B9ME24	521	Probable ubiquinone biosy	yes	no	0.499	0.556	0.331	3e-34
A1W4D7	521	Probable ubiquinone biosy	yes	no	0.509	0.568	0.331	4e-34
A9BP42	521	Probable ubiquinone biosy	yes	no	0.478	0.533	0.327	8e-33

>sp|Q55G83|ABKC_DICDI Probable serine/threonine-protein kinase abkC OS=Dictyostelium discoideum GN=abkC PE=3 SV=1

 Score =  269 bits (688), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 222/415 (53%), Gaps = 69/415 (16%)

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           +  V + +R L LG++  PS++  P    F P  +ELW  ++L T++ +G  +IK+GQW 
Sbjct: 151 INLVKIGIRVLELGLILLPSVLTFPCC--FIPGVKELWWQLLLETIQFSGTCWIKFGQWI 208

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
           +TRPDLFP  L +K S+LHS+ P HSF +T ++IE +F G+ + ++F  F+E P+ASGS+
Sbjct: 209 STRPDLFPDLLIEKFSQLHSQCPSHSFQFTNESIENSFNGKSIKDLFLWFDEEPMASGSV 268

Query: 298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
           AQVH+A       G+     V  VKV HP V  +I+RDF II       S IP +KWL L
Sbjct: 269 AQVHKA---LTMDGK-----VAVVKVLHPNVKSNIKRDFFIIYSLIWAFSHIPEMKWLSL 320

Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417
            ES+ +F   MM Q DL  EA+HL+RF  NF+   +V FPKP+YPLV   VLVE++E G 
Sbjct: 321 PESILEFGKSMMKQADLELEASHLNRFNSNFKYNSEVIFPKPLYPLVSKEVLVESFEPGS 380

Query: 418 CVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK---KSSQ 474
            +  ++ +   H      LA IG  A ++M+LVDNF+HAD+HPGN+LVR +     KS  
Sbjct: 381 PIMDFIKKNDHH---NPTLAKIGLSAYMQMMLVDNFVHADLHPGNVLVRTSDDDNFKSID 437

Query: 475 KRLFR----------------------------------------------------SKP 482
              F+                                                    S P
Sbjct: 438 NNYFKKYNNDNDQQQQQQYNLPFKRKLYDTIEKSHKKFDSMLGGIQLKSIDFKEHQKSSP 497

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
            +IFLDVG+  +L + D+ + +E F  +   +G+  AE  +R +++  C   + +
Sbjct: 498 KLIFLDVGLVTQLGQQDKDHFIELFTEIVNGNGKEGAELLIRYAREAKCTEEEMY 552

Dictyostelium discoideum (taxid: 44689)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9P7M0|YOS3_SCHPO ABC1 family protein C21C3.03, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21C3.03 PE=3 SV=2

 Score =  213 bits (542), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 197/405 (48%), Gaps = 62/405 (15%)

Query: 184 LLMRALYLGVLFSPSIMMAPFAD--------SFGPQFRELWLHVVLRTLETAGPAFIKWG 235
           +L+R+  L ++FSP I+  PF          S       +WL  ++  LE AG  FIK G
Sbjct: 154 ILLRSFNLFIIFSPIIITLPFIALISFLHLRSLSSLTVSIWLRFLVTQLERAGATFIKLG 213

Query: 236 QWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFDGFEEAPVAS 294
           QWAA+R DLFP   CK LS+LHS    HS AYT+  I + +    + EIF  F   P+  
Sbjct: 214 QWAASRTDLFPPAFCKTLSKLHSHVTPHSLAYTQSVICKTYKVESIEEIFVNFNPIPIGV 273

Query: 295 GSIAQVHRASLR-------------------FRYPGQKVKPIV--VAVKVRHPGVGESIR 333
           G+IAQV+ A+++                   FR       P+   VA+KV HP V + I 
Sbjct: 274 GAIAQVYTATIKKAATQQDNSYFTSMLQSIGFRQKNISDAPVTQDVAIKVLHPNVEKYIS 333

Query: 334 RDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD 393
            D  I+   AK+ +++P++KWL L + V+ F   +  Q++L  EA HL++F  NFR  + 
Sbjct: 334 LDLQILGFFAKLINLVPSMKWLSLPDEVKVFGAMLNQQLNLHYEALHLNQFRLNFRGNRY 393

Query: 394 VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNF 453
           V FP P        +L+E Y  G  +S ++    G       LA+ G +AL +ML+VDNF
Sbjct: 394 VEFPAPYDDYTTNQILLEDYMPGIPLSAFLKHKSG--PFNKLLANTGNNALFQMLIVDNF 451

Query: 454 IHADMHPGNILVR---------VAQKKSSQKRLFR---------------------SKPH 483
            HAD+HPGN+LV+           Q       +++                      +P 
Sbjct: 452 THADLHPGNVLVKFYKGIPKTIFNQDNEINDSIYKILSTCSTEEWDSAMEELNILGYRPT 511

Query: 484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ 528
           ++FLD G+  +LS  D+ N ++ F+AV    G  A    +  S+Q
Sbjct: 512 LVFLDAGLVTKLSTQDQKNFLDLFQAVLTFHGYEAGLLMVERSRQ 556

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q02981|YP109_YEAST ABC1 family protein YPL109C, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL109C PE=1 SV=2

 Score =  209 bits (531), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 202/408 (49%), Gaps = 59/408 (14%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFR------------ELWLHVVLRTL 224
           ++VE V  ++R L +  +F P +++ P +  FG + +             +W  ++ + L
Sbjct: 111 NIVEPVCTILRFLEISAIFLPLLLLYPIS-WFGHKLKITDTNITETRGSLIWCQLLRKAL 169

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEI 283
           E AGP+FIK GQWA +R D+F   LC +L +LHS    HS ++T + + +A    ++ + 
Sbjct: 170 ELAGPSFIKLGQWAGSRTDIFSHALCHELGKLHSNVTAHSLSFTLEKLSQALKVDKIEDA 229

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV--------AVKVRHPGVGESIRRD 335
           FD F   P+  GSIAQV+   L  +Y   K   I +        A+K+ HP V   IRRD
Sbjct: 230 FDEFNRTPIGVGSIAQVYVGELSQKYI-DKYDNIQIGKDGNRWCAIKILHPNVRSQIRRD 288

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
             I+   A   + IP ++WL L   V QF++ M  Q+DL  EA +L RF  NF+    V 
Sbjct: 289 LKIMKFCADAINWIPTMEWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFKNSIQVK 348

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHIGTHALLKMLLVDNF 453
           FPKP  PL +  V+ E +  G  + +++   +      L   ++     A L+ML++D+F
Sbjct: 349 FPKPFLPLSNRDVMFEEHVYGLSMEKFLSTKKQINDVELCKKVSDPFVDAFLQMLILDDF 408

Query: 454 IHADMHPGNILVRVAQK-------------------------KSSQKRLFRSK------- 481
           +HAD+HPGN+++R  +                          +  Q + F  K       
Sbjct: 409 VHADLHPGNVIIRFVKTNKYGTNIISSELESYRITHDLRKKIEEDQDQDFVGKLKSVLTN 468

Query: 482 --PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK 527
             P + F+D G+  EL++ +R+N +  F A+AR DG  A E  +  S+
Sbjct: 469 YTPQICFIDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSR 516

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q7Z695|ADCK2_HUMAN Uncharacterized aarF domain-containing protein kinase 2 OS=Homo sapiens GN=ADCK2 PE=2 SV=1

 Score =  160 bits (405), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/267 (37%), Positives = 139/267 (52%), Gaps = 19/267 (7%)

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GS A V RA +    P +    I VAVKV HPG+   +  D +++ + +++  V+P +KW
Sbjct: 285 GSNAGVSRAQVPGHQP-EATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKW 343

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           L L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE
Sbjct: 344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   SS 
Sbjct: 404 ESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSS 462

Query: 475 KR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           +            L  + P       ++ LD G+ AEL   D  N    F AV    G+ 
Sbjct: 463 QEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQR 522

Query: 518 AAECTLRLSKQQNCPNPKAFIEWMRLL 544
            AE  L  ++   C + + F   M +L
Sbjct: 523 VAELILHHARASECRDVEGFKTEMAML 549

The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q6NSR3|ADCK2_MOUSE Uncharacterized aarF domain-containing protein kinase 2 OS=Mus musculus GN=Adck2 PE=2 SV=1

 Score =  150 bits (378), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 131/254 (51%), Gaps = 18/254 (7%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I VAVKV HPG+   +  D +++ + +K   ++P VKWL L E V++F   M+ Q DL  
Sbjct: 297 IPVAVKVLHPGLLSQVSMDLLLMKIGSKALGLLPGVKWLSLPEIVEEFEKLMVQQTDLRY 356

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L  F +NF+    V FP P+ PL+   +LVETYE+   VS Y  +      LK  +
Sbjct: 357 EAQNLEHFQHNFQDMASVKFPTPLRPLITRDILVETYEESVPVSSY-QQAGIPTDLKRKI 415

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV------------ 484
           A +G + LLKM+ VDNF+H D+HPGNILV+ A   S    + + + +V            
Sbjct: 416 AQLGINMLLKMIFVDNFVHGDLHPGNILVQGADGVSPSLEMQQQQVNVCDTLVATIAPAL 475

Query: 485 -----IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
                + LD G+ A+L  +D  N    F+AV    G   AE  L  ++   C + + F  
Sbjct: 476 CPLRLVLLDAGIVAKLQASDLRNFRAVFQAVVMGQGHRVAELMLHHAQANECRDVERFKA 535

Query: 540 WMRLLPSGVLRRVI 553
            M  L +   + ++
Sbjct: 536 EMATLVTQARKNIV 549

The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|A1TTA2|UBIB_ACIAC Probable ubiquinone biosynthesis protein UbiB OS=Acidovorax citrulli (strain AAC00-1) GN=ubiB PE=3 SV=1

 Score =  148 bits (374), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/306 (35%), Positives = 155/306 (50%), Gaps = 27/306 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAF R + E
Sbjct: 56  ALERLGPIFVKFGQVLSTRRDLLPPDIANELALLQDRVPPFDPDVAVATIERAFRRPVGE 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           +F  FE  PVAS SIAQVH A +R R+  ++     VAVKV  PG+   I  D  ++  +
Sbjct: 116 VFVSFERVPVASASIAQVHFAIVRDRHGVER----EVAVKVLRPGMLPVIDNDLGLMRAM 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  + S+    K L+  + V +F  ++  ++DL REAA+ ++   N  R   V  P+ ++
Sbjct: 172 AGWVESLSADGKRLKPRQVVAEFDNYLHDELDLIREAANAAQLRRNMERLGLVRIPEILW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIH 455
              HP VLV    +G  +S+        ERL++A      LA  G       +  D F H
Sbjct: 232 DFCHPEVLVMERMKGVPISQI-------ERLRAAGVDIRQLARDGVTIFFTQVFRDGFFH 284

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI  +V+ +  S  R        I LD G+   L++ D+  L + F A  RRD 
Sbjct: 285 ADMHPGNI--QVSLEPGSFGR-------YISLDFGIVGSLTEFDKEYLAQNFTAFFRRDY 335

Query: 516 RTAAEC 521
           +  AE 
Sbjct: 336 KRVAEL 341

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Acidovorax citrulli (strain AAC00-1) (taxid: 397945)

>sp|C5CWY2|UBIB_VARPS Probable ubiquinone biosynthesis protein UbiB OS=Variovorax paradoxus (strain S110) GN=ubiB PE=3 SV=1

 Score =  147 bits (371), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 168/357 (47%), Gaps = 33/357 (9%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLR------------------TLETA 227
           MR  Y G+      +     +     F++ WL VV R                   LE  
Sbjct: 1   MRRFYRGIFIVWVALRYGLDELVLTSFQKPWLRVVARIVSIGRNLDAPRGQRLREALERL 60

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP F+K+GQ  +TR DL P D+  +L+ L  + P    A    TIERAF R + ++F  F
Sbjct: 61  GPIFVKFGQVLSTRRDLLPPDIADELAFLQDRVPPFPSAVAIATIERAFRRPVGDVFVQF 120

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK-IS 346
           +E P+AS SIAQVH A++R      + +   VAVKV  P +   I +D  ++ + A  + 
Sbjct: 121 DETPIASASIAQVHFATIR----TDEGEVREVAVKVLRPSMRGVIEKDLALMAMMAGWVE 176

Query: 347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP 406
            + P  K L+  E V +F  ++  ++DL REAA+ ++   N    + V  P+  +   HP
Sbjct: 177 KLSPDGKRLKPREVVGEFDKYLHDELDLVREAANAAQLRRNMASLELVLIPEMFWDFCHP 236

Query: 407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR 466
            V+V     G  +++ +D L+        LA  G       +  D F HADMHPGNI V 
Sbjct: 237 EVIVMERMNGVPIAQ-LDRLRAAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVS 295

Query: 467 VAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
           +A +   +          I LD G+   L+++D+  L + F A  RRD +  AE  L
Sbjct: 296 LAPETFGR---------YISLDFGIIGTLTESDKEYLAQNFVAFFRRDYKRVAELHL 343

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Variovorax paradoxus (strain S110) (taxid: 543728)

>sp|B9ME24|UBIB_ACIET Probable ubiquinone biosynthesis protein UbiB OS=Acidovorax ebreus (strain TPSY) GN=ubiB PE=3 SV=1

 Score =  146 bits (369), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 159/335 (47%), Gaps = 45/335 (13%)

Query: 212 FRELWLHVVLRT------------------LETAGPAFIKWGQWAATRPDLFPRDLCKKL 253
           FR+ WL  V R                   LE+ GP F+K+GQ  +TR DL P D+  +L
Sbjct: 27  FRQPWLRAVTRVITFGRKLDAPRGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADEL 86

Query: 254 SELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK 313
           + L  + P         TIERAF R + E+F  F+  PVAS SIAQVH A +R R    +
Sbjct: 87  ALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFAVIRDRQGHAR 146

Query: 314 VKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQV 372
                VAVKV  PG+   I +D  ++ + A  + S+    K L+  E V +F  ++  ++
Sbjct: 147 ----EVAVKVLRPGMLPVIDKDLALMRMMAGWVESLSADGKRLKPREVVAEFDNYLHDEL 202

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DL REAA+ ++   N +    V  P+  +   H  VLV    +G  +++        ERL
Sbjct: 203 DLVREAANAAQLRRNMQGLDLVLIPEVFWDFCHAEVLVMERMKGVPINQV-------ERL 255

Query: 433 KSA------LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIF 486
           +SA      LA  G       +  D F HADMHPGNI V +A +   +          I 
Sbjct: 256 RSAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGR---------YIS 306

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           LD G+   L++ D+  L + F A  RRD +  AE 
Sbjct: 307 LDFGIVGTLTEFDKEYLAQNFTAFFRRDYKRVAEL 341

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Acidovorax ebreus (strain TPSY) (taxid: 535289)

>sp|A1W4D7|UBIB_ACISJ Probable ubiquinone biosynthesis protein UbiB OS=Acidovorax sp. (strain JS42) GN=ubiB PE=3 SV=1

 Score =  146 bits (369), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 157/329 (47%), Gaps = 33/329 (10%)

Query: 212 FRELWLHVVLRT------------------LETAGPAFIKWGQWAATRPDLFPRDLCKKL 253
           FR+ WL  V R                   LE+ GP F+K+GQ  +TR DL P D+  +L
Sbjct: 27  FRQPWLRAVTRVITFGRKLDAPRGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADEL 86

Query: 254 SELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK 313
           + L  + P         TIERAF R + E+F  F+  PVAS SIAQVH A +R R    +
Sbjct: 87  ALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFAVIRDRQGHAR 146

Query: 314 VKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQV 372
                VAVKV  PG+   I +D  ++ + A  + S+    K L+  E V +F  ++  ++
Sbjct: 147 ----EVAVKVLRPGMLPVIDKDLALMRMMAGWVESLSADGKRLKPREVVAEFDNYLHDEL 202

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DL REAA+ ++   N +    V  P+  +   H  VLV    +G  +++ VD L+     
Sbjct: 203 DLVREAANAAQLRRNMQGLDLVLIPEVFWDFCHAEVLVMERMKGVPINQ-VDRLRSAGVD 261

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMT 492
              LA  G       +  D F HADMHPGNI V +A +   +          I LD G+ 
Sbjct: 262 IPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGR---------YISLDFGIV 312

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAEC 521
             L++ D+  L + F A  RRD +  AE 
Sbjct: 313 GTLTEFDKEYLAQNFTAFFRRDYKRVAEL 341

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Acidovorax sp. (strain JS42) (taxid: 232721)

>sp|A9BP42|UBIB_DELAS Probable ubiquinone biosynthesis protein UbiB OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ubiB PE=3 SV=1

 Score =  142 bits (357), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 150/305 (49%), Gaps = 27/305 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+ ++L+ L  + P         TIERAF ++L +I
Sbjct: 57  LEELGPIFVKFGQVLSTRSDLMPPDVAEELARLQDRVPPFDSQIAVDTIERAFRKKLDQI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A +  R   Q+     VAVKV  PG+   I +D  ++++ A
Sbjct: 117 FVSFEREPVASASIAQVHFAVISDRNGVQR----DVAVKVLRPGMKTVIDKDLALMHMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  +    K L+  + V +F  ++  ++DL REA++ ++   N      V  P+  + 
Sbjct: 173 RWVERLSADGKRLKPRQVVAEFDNYLHDELDLIREASNAAQLRRNMEGLDLVLIPEVYWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
                V+V     G  +S+        ERL+ A      LA  G       +  D F HA
Sbjct: 233 FCRSDVMVMQRMTGVPISQV-------ERLREAGVDIPKLARDGVTIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI+V +  +   +          I LD G+   L++ D+  L + F A  RRD +
Sbjct: 286 DMHPGNIMVSLEPETFGR---------YISLDFGIVGTLTEYDKEYLAQNFTAFFRRDYK 336

Query: 517 TAAEC 521
             AE 
Sbjct: 337 RVAEL 341

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Delftia acidovorans (strain DSM 14801 / SPH-1) (taxid: 398578)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	581
224078834	635	predicted protein [Populus trichocarpa]	0.920	0.842	0.714	0.0
356549423	625	PREDICTED: uncharacterized aarF domain-c	0.912	0.848	0.738	0.0
224114105	609	predicted protein [Populus trichocarpa]	0.874	0.834	0.741	0.0
356524754	622	PREDICTED: probable serine/threonine-pro	0.910	0.850	0.700	0.0
449517365	624	PREDICTED: probable serine/threonine-pro	0.912	0.849	0.691	0.0
225469916	579	PREDICTED: uncharacterized aarF domain-c	0.820	0.823	0.765	0.0
356554983	516	PREDICTED: probable serine/threonine-pro	0.729	0.821	0.825	0.0
297849522	624	ABC1 family protein [Arabidopsis lyrata	0.912	0.849	0.664	0.0
357475969	630	aarF domain-containing protein kinase, p	0.925	0.853	0.655	0.0
42561917	624	aarF domain-containing kinase [Arabidops	0.912	0.849	0.656	0.0

>gi|224078834|ref|XP_002305646.1| predicted protein [Populus trichocarpa] gi|222848610|gb|EEE86157.1| predicted protein [Populus trichocarpa]

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/543 (71%), Positives = 448/543 (82%), Gaps = 8/543 (1%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHS---ELTKYGAVVAVGLRVPYYRFYSHYGFPSGGH 57
           + R LT  NI + A+ + + ++   +   E+ KYG VV+VGL +P +R+YS Y FPS G+
Sbjct: 6   VGRFLTIGNIKKVARLIFSKQKSSSNQLLEVKKYGTVVSVGLHLPQFRYYSQYSFPSRGY 65

Query: 58  CSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQ 117
            S  +YNVK+   R C     S  S S V T  AQ+AWKRL    S     FP ISRIAQ
Sbjct: 66  SSFALYNVKEQFGRRCFTSCYS--STSDVVTRNAQLAWKRLCRKGSANGWSFPRISRIAQ 123

Query: 118 AFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYS 177
           A SLALTRS L+VP  +A T GQ+AWAQR   E++++P  N+ Y RAQDGHA+VT ++ +
Sbjct: 124 AVSLALTRSHLVVPSALALTCGQVAWAQRTLVESDFYP--NSLYMRAQDGHAYVTLLVSA 181

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQW 237
           +V+  +LL+RA+YL +LFSPS+MMAPFADS GP+FR++WLHVV RTLE AGPAFIKWGQW
Sbjct: 182 VVDAFVLLVRAIYLAILFSPSMMMAPFADSCGPEFRKIWLHVVHRTLEKAGPAFIKWGQW 241

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
           AATRPDLFPRDLC KLSELHSKAPEHSFAYTKKTIERAFGR+LSEIF+ FEE PVASGSI
Sbjct: 242 AATRPDLFPRDLCTKLSELHSKAPEHSFAYTKKTIERAFGRKLSEIFEDFEEVPVASGSI 301

Query: 298 AQVHRASLRFRYPGQK-VKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLR 356
           AQVHRASLRFRYPG+K  KP +VAVKVRHPGVGESIRRDF+IINL AKIS+ IP + WLR
Sbjct: 302 AQVHRASLRFRYPGKKQTKPTIVAVKVRHPGVGESIRRDFMIINLVAKISTFIPTLNWLR 361

Query: 357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG 416
           LDES+QQF VFMMSQVDLAREAA LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE+YEQG
Sbjct: 362 LDESLQQFGVFMMSQVDLAREAAQLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVESYEQG 421

Query: 417 ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR 476
           E VS YVD+L+GH R+KSALAHIGTHALLKMLLVDNFIHADMHPGNILVR+++  SS+KR
Sbjct: 422 ESVSHYVDDLEGHNRIKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRLSKNSSSRKR 481

Query: 477 LFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKA 536
           LF+SKPHVIFLDVGMTAELS+ DR+NL+ FFKAVA RDGRTAAE  L LSK+QNCPNPKA
Sbjct: 482 LFKSKPHVIFLDVGMTAELSQGDRINLINFFKAVATRDGRTAAESALSLSKRQNCPNPKA 541

Query: 537 FIE 539
           FIE
Sbjct: 542 FIE 544

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549423|ref|XP_003543093.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2-like [Glycine max]

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/536 (73%), Positives = 446/536 (83%), Gaps = 6/536 (1%)

Query: 7   FRNIWRAAQSVL-TNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNV 65
            RNI RAAQSV   N R  + E++K G VV+VG  + + R Y  Y FPS    S   +  
Sbjct: 2   LRNIRRAAQSVCRINSR--YLEVSKNGPVVSVGPNIHHCRLYMQYKFPSEACSSFLWHGT 59

Query: 66  KQLLCRSCSVRSLSVASASSVATHQAQIAWKRLF-YYSSFRDQIFP-CISRIAQAFSLAL 123
           ++   +  S R+ SV SAS+  TH +QIAWKRL+  Y S  D  FP  ++ IAQA SLAL
Sbjct: 60  REGFRKRGSFRNFSVTSASNTVTHHSQIAWKRLYRKYCSSGDGTFPPTVNMIAQAVSLAL 119

Query: 124 TRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVI 183
            RS LLVPGI+AFT G+LA AQ+  A+ E +PSQN  Y RAQDG+ ++ +  + +VE +I
Sbjct: 120 ARSYLLVPGILAFTCGELALAQQNWADAERYPSQNGLYMRAQDGYNYMFTFAFIIVEGLI 179

Query: 184 LLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPD 243
           LLMRALYL +LFSPSI+MAPFAD FGP FR+LWLHVV RTLE +GPAFIKWGQWAATRPD
Sbjct: 180 LLMRALYLAILFSPSIVMAPFADCFGPNFRKLWLHVVHRTLEKSGPAFIKWGQWAATRPD 239

Query: 244 LFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           LFPRDLC KLSELH+KAPEHSF YTKKTIERAFGR++SEIFD FEE PVASGSIAQVHRA
Sbjct: 240 LFPRDLCTKLSELHTKAPEHSFCYTKKTIERAFGRKISEIFDNFEELPVASGSIAQVHRA 299

Query: 304 SLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ 363
           SL+ RYPGQ+ KP++VAVKVRHPGVGESIRRDF IINLAAKIS  IPA+ WLRLDESVQQ
Sbjct: 300 SLKCRYPGQQAKPLLVAVKVRHPGVGESIRRDFAIINLAAKISKFIPALNWLRLDESVQQ 359

Query: 364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV 423
           FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE+GE VS YV
Sbjct: 360 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEKGESVSYYV 419

Query: 424 DELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH 483
           D+LQGHER+KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV+Q K S+KRLF+SKPH
Sbjct: 420 DDLQGHERVKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVSQNK-SRKRLFKSKPH 478

Query: 484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
           V+FLDVGMTAELS +DRVNL+EFFKAVARRDGRTAAEC L LS QQNCPNP+AFIE
Sbjct: 479 VVFLDVGMTAELSGSDRVNLLEFFKAVARRDGRTAAECALNLSNQQNCPNPEAFIE 534

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114105|ref|XP_002316668.1| predicted protein [Populus trichocarpa] gi|222859733|gb|EEE97280.1| predicted protein [Populus trichocarpa]

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/514 (74%), Positives = 435/514 (84%), Gaps = 6/514 (1%)

Query: 27  ELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVRSLSVASASSV 86
           E+ ++G VV+V L +P +R YS Y FPS  + S  + N+K+   R C  R+ S  S    
Sbjct: 10  EVKEHGTVVSVCLHLPQFRNYSQYSFPSREYSSFALCNIKEQFGRRCFTRNYSFTS--DA 67

Query: 87  ATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQR 146
            TH AQ+AWKRLF   S     FP ISRIAQA SLALTRS L+VP  +  T GQ+AWAQR
Sbjct: 68  VTHNAQLAWKRLFRKGSASGWSFPRISRIAQAVSLALTRSQLVVPSALVLTCGQVAWAQR 127

Query: 147 VSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFAD 206
              E +Y+P   + Y RAQDGHA+VTS++ ++VE  +LL+RA+YL +LFSPS++MAPFAD
Sbjct: 128 TLVEPDYYP--GSLYMRAQDGHAYVTSLVSAIVEAFVLLVRAIYLAILFSPSLLMAPFAD 185

Query: 207 SFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFA 266
           S GP+FR++WLHVV RTLE AGPAFIKWGQWAATRPDLFPRDLC KLSELHSKAPEHSFA
Sbjct: 186 SCGPEFRKMWLHVVHRTLEKAGPAFIKWGQWAATRPDLFPRDLCTKLSELHSKAPEHSFA 245

Query: 267 YTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK-VKPIVVAVKVRH 325
           YTKKTIERAFGR+LSEIF+GFEE PVASGSIAQVHRASL+  YPG+K  KP VVAVKVRH
Sbjct: 246 YTKKTIERAFGRKLSEIFEGFEEVPVASGSIAQVHRASLKCHYPGKKQTKPTVVAVKVRH 305

Query: 326 PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
           PGVGESIRRDF+IINL AKIS+ +PA+ WLRLDESVQQFAVFMMSQVDLAREAAHLSRFI
Sbjct: 306 PGVGESIRRDFMIINLVAKISTFLPALNWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 365

Query: 386 YNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALL 445
           YNFRRWKDVSFPKPVYPLVHPAVLVE+YEQGE VS YVD+L+GH  +K+ALAHIGTHALL
Sbjct: 366 YNFRRWKDVSFPKPVYPLVHPAVLVESYEQGESVSHYVDDLEGHNWIKTALAHIGTHALL 425

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE 505
           KMLLVDNFIHADMHPGNILVRV+   SS+KRLF+SKPHV+FLDVGMTAELS+ DRVNL++
Sbjct: 426 KMLLVDNFIHADMHPGNILVRVS-PNSSRKRLFKSKPHVVFLDVGMTAELSQGDRVNLID 484

Query: 506 FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
           FFKA+ARRDGRTAAECTLRLSK+QNCPNPKAFIE
Sbjct: 485 FFKAIARRDGRTAAECTLRLSKRQNCPNPKAFIE 518

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524754|ref|XP_003530993.1| PREDICTED: probable serine/threonine-protein kinase abkC-like [Glycine max]

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/534 (70%), Positives = 434/534 (81%), Gaps = 5/534 (0%)

Query: 9   NIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQL 68
           N+ + AQS+L   R  + E ++  A  +VG  +   R Y  Y FP  G  S   +  ++ 
Sbjct: 4   NVGKVAQSILRTHRRRYLEASRNEAFTSVGPNIKQCRMYMQYKFPIEGCNSFLWHWTREN 63

Query: 69  LCRSCSVRSLSVASASSVATHQAQIAWKRLFY-YSSFRDQIFPCISRIAQAFSLALTRSP 127
             + CS R+ SV SA +VA + ++IAWK L+  YSS     F  I+ IAQA SLALTRS 
Sbjct: 64  FHKGCSFRNFSVTSARNVAAYNSRIAWKLLYKKYSSNGYNGFTSINMIAQAVSLALTRSY 123

Query: 128 LLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMR 187
           LLVPG +AF SG+LA AQ+  A+TE++PSQNA Y  AQDG+ ++ + ++ +VE ++LL+R
Sbjct: 124 LLVPGFLAFASGKLALAQQNGADTEFYPSQNALYMHAQDGYGYMFAFVFIVVESLVLLVR 183

Query: 188 ALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPR 247
           A+YL +LFSPSI+MAP AD FGP+FR++WL VV RTLE AGPAFIKWGQWAATRPDLFPR
Sbjct: 184 AIYLAILFSPSILMAPLADYFGPEFRKMWLSVVHRTLEKAGPAFIKWGQWAATRPDLFPR 243

Query: 248 DLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRF 307
           DLC KL+EL +KAP+HSF+YTKKTIERAFGR++SEIF+ FEE PVASGSIAQVHRASL++
Sbjct: 244 DLCTKLAELQTKAPQHSFSYTKKTIERAFGRKISEIFENFEEVPVASGSIAQVHRASLKY 303

Query: 308 RYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF 367
           RYPGQ+ KP+VVAVKVRHPGVGESIRRDF IINL AK S  I A+ WLRLDESVQQFAVF
Sbjct: 304 RYPGQQAKPLVVAVKVRHPGVGESIRRDFAIINLVAKSSKFIHALNWLRLDESVQQFAVF 363

Query: 368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ 427
           MMSQVDLAREAAHLSRFIYNFRR +DVSFPKPVYPLVHPAVLVETYE GE VS YVDELQ
Sbjct: 364 MMSQVDLAREAAHLSRFIYNFRRSRDVSFPKPVYPLVHPAVLVETYENGESVSHYVDELQ 423

Query: 428 GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFL 487
           GHER+KSALAHIGT+ALLKMLLVDNFIHADMHPGNILVR        KRLF+SKPHVIFL
Sbjct: 424 GHERIKSALAHIGTNALLKMLLVDNFIHADMHPGNILVR----SKPHKRLFKSKPHVIFL 479

Query: 488 DVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWM 541
           DVGMTAELS +DRVNL+EFFKAVA RDGRTAAECTLRLSKQQNCPNPKAF+E M
Sbjct: 480 DVGMTAELSGSDRVNLLEFFKAVAHRDGRTAAECTLRLSKQQNCPNPKAFVEEM 533

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517365|ref|XP_004165716.1| PREDICTED: probable serine/threonine-protein kinase abkC-like [Cucumis sativus]

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/531 (69%), Positives = 434/531 (81%), Gaps = 1/531 (0%)

Query: 9   NIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQL 68
           NI +A +S+ TN R  H E+   G  V V   + + +  SHY F + GH   P+Y  K+ 
Sbjct: 4   NIRKAVRSLHTNHRFRHLEVRNIGTTVTVEPLL-HNKLLSHYRFLARGHGFSPLYCTKRN 62

Query: 69  LCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPL 128
           L  + + R+  + + S+V  HQAQ  WKR+    S      P ++ +A+AF LA++RS L
Sbjct: 63  LSLTRNSRNFCIWTTSNVVKHQAQFVWKRVCSKFSSNGYSIPTLNEVARAFCLAMSRSHL 122

Query: 129 LVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRA 188
           +VPGI AFT G+LA AQR     + +PS N+FY RAQDGHA++ S+L+S +E +ILL RA
Sbjct: 123 IVPGIFAFTCGELACAQRTLTNMDPYPSHNSFYIRAQDGHAYLISLLFSTLEGIILLFRA 182

Query: 189 LYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRD 248
           LYL +LFSPSI+MAPFAD FG +FR+LWL VV R+LE  GPAFIKWGQWAATRPDLFPRD
Sbjct: 183 LYLAILFSPSILMAPFADVFGLRFRKLWLQVVHRSLEKGGPAFIKWGQWAATRPDLFPRD 242

Query: 249 LCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFR 308
           LC +LS+LH+KAPEHSFAY++KTIERAFGR+LSEIF+ FEE PVASGSIAQVHRASL+FR
Sbjct: 243 LCIELSKLHTKAPEHSFAYSRKTIERAFGRKLSEIFENFEEEPVASGSIAQVHRASLKFR 302

Query: 309 YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
           YPGQ+++P+VVAVKVRHPGVGE IRRDF+II+  AKIS  IP + WLRLDESVQQFAVFM
Sbjct: 303 YPGQQMEPMVVAVKVRHPGVGELIRRDFIIIDFVAKISKFIPTLNWLRLDESVQQFAVFM 362

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
           MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE VS YVD L+G
Sbjct: 363 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGESVSHYVDGLEG 422

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD 488
           +ERLKS+LAHIGTHALLKMLLVDNFIHADMHPGNILVRV+ +KS +KRLF+SKPHV+FLD
Sbjct: 423 YERLKSSLAHIGTHALLKMLLVDNFIHADMHPGNILVRVSPEKSRRKRLFKSKPHVVFLD 482

Query: 489 VGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
           VGMTAELS  DRVNL+EFFKAVARRDGRT AE  L+L+KQQNCP+P+AFIE
Sbjct: 483 VGMTAELSGNDRVNLLEFFKAVARRDGRTVAERALKLAKQQNCPDPEAFIE 533

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469916|ref|XP_002269141.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2-like [Vitis vinifera]

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/477 (76%), Positives = 417/477 (87%)

Query: 63  YNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLA 122
           +  +  +C+    ++ S  SAS+VATH AQ+AW+RL+   S   + FP + RIAQA SLA
Sbjct: 12  FGTRNSICKHGYSKNFSAVSASNVATHHAQVAWRRLYEIFSCNGKTFPPLGRIAQAVSLA 71

Query: 123 LTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECV 182
           L+RS L+VPG+ AFT G+LA AQR    T+++PS+N  Y RAQDGHA+VTS+L+S+ E V
Sbjct: 72  LSRSHLVVPGMFAFTFGELALAQRPLEYTDHYPSRNTLYMRAQDGHAYVTSLLFSVFEGV 131

Query: 183 ILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRP 242
           +L +RALYL +LFSP I+MAPFADSFG +FR LWL VV  TLE AGPAFIKWGQWAATRP
Sbjct: 132 VLFLRALYLAILFSPCIVMAPFADSFGHRFRNLWLQVVHGTLEKAGPAFIKWGQWAATRP 191

Query: 243 DLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHR 302
           DLF RD+C KL+ELH+KAPEHSFAYTKKTIE+AFGR LSEIF+ FEE PVASGSIAQVHR
Sbjct: 192 DLFARDICTKLAELHTKAPEHSFAYTKKTIEKAFGRNLSEIFEDFEELPVASGSIAQVHR 251

Query: 303 ASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ 362
           ASL+FRYPGQ+VKP+VVAVKVRHPGVGESIRRDF+IINL AKIS+ IP ++WLRLDESVQ
Sbjct: 252 ASLKFRYPGQQVKPVVVAVKVRHPGVGESIRRDFLIINLVAKISNFIPTLRWLRLDESVQ 311

Query: 363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRY 422
           QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE+YE GE VS Y
Sbjct: 312 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVESYEHGESVSHY 371

Query: 423 VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP 482
           VD+L+G +R+KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV Q KSS+KRLF+SKP
Sbjct: 372 VDDLEGQKRIKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVTQSKSSRKRLFKSKP 431

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
           HVIFLDVGMTAELSK+D+VNL+ FFKAVARRDGRTAAEC LRLSKQQNCPNPKAFI+
Sbjct: 432 HVIFLDVGMTAELSKSDQVNLLGFFKAVARRDGRTAAECALRLSKQQNCPNPKAFIK 488

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554983|ref|XP_003545820.1| PREDICTED: probable serine/threonine-protein kinase abkC-like [Glycine max]

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/425 (82%), Positives = 385/425 (90%), Gaps = 1/425 (0%)

Query: 115 IAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSV 174
           IAQA SLAL RS  LVPGI+AFT G+LA AQR  AE E +PSQN  Y RAQDG+ ++ + 
Sbjct: 2   IAQAVSLALARSYFLVPGILAFTWGELALAQRNWAEAERYPSQNGLYMRAQDGYNYMFTF 61

Query: 175 LYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKW 234
            + +VE +ILLMRALYL +LFSPSI+MAPFAD FGP FR+LWL+VV RTLE +GPAFIKW
Sbjct: 62  TFIIVEGLILLMRALYLAILFSPSIVMAPFADCFGPNFRKLWLNVVHRTLEKSGPAFIKW 121

Query: 235 GQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVAS 294
           GQWAATRPDLFPRDLC KLSELH+KAPEHSF+YTKKTIERAFGR++SEIFD FEE PVAS
Sbjct: 122 GQWAATRPDLFPRDLCTKLSELHTKAPEHSFSYTKKTIERAFGRKISEIFDNFEELPVAS 181

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GSIAQVHRASL+ RYPGQ+ KP++VAVKVRHPGVGESIRRDF IINLAAKIS  IPA+ W
Sbjct: 182 GSIAQVHRASLKCRYPGQQAKPLLVAVKVRHPGVGESIRRDFAIINLAAKISKFIPALNW 241

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE
Sbjct: 242 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 301

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +GE VS YVD+LQGHER+KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV+Q K S+
Sbjct: 302 KGESVSYYVDDLQGHERVKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVSQSK-SR 360

Query: 475 KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNP 534
           KRLF+SKPHV+FLDVGMTAELS +DRVNL+EFFKAVARRDGRTAAEC L LSKQQNCPNP
Sbjct: 361 KRLFKSKPHVVFLDVGMTAELSGSDRVNLLEFFKAVARRDGRTAAECALNLSKQQNCPNP 420

Query: 535 KAFIE 539
           +AFIE
Sbjct: 421 EAFIE 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849522|ref|XP_002892642.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297338484|gb|EFH68901.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/542 (66%), Positives = 430/542 (79%), Gaps = 12/542 (2%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYG-FPSGGHCS 59
           MSR L  R + +  QS+L+N++   S+   Y       LR P +R YS  G  PS G+C 
Sbjct: 1   MSRFLISRIVGKQTQSLLSNQKERVSQWGSYRTAFTAALRSPQFRTYSSSGRVPSNGYCI 60

Query: 60  VPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAF 119
           +   ++K         RS S   A +V +H AQ+AWKRL Y  S R      IS +AQAF
Sbjct: 61  LAFRDLKGSFLSKHLSRSYSTVPARNVVSHHAQVAWKRLHYKYSER------ISTMAQAF 114

Query: 120 SLALTRSPLLVPGIIAFTSGQLAWAQRV-SAETEYFPSQNAFYTRAQDGHAFVTSVLYSL 178
           SL+LTRS LL+PGI+A T GQ+AWAQR   +   ++ S  + YTRA++G  F++S+L+S+
Sbjct: 115 SLSLTRSHLLIPGIVALTCGQVAWAQRAPGSGINHYASDKSLYTRAKNGPIFLSSLLFSV 174

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           +E  IL+ RA Y+  LF+PSI+M    +S GP+FR++WL +V RTLE AGPAFIKWGQWA
Sbjct: 175 IEGFILIGRAFYIACLFTPSILMGLVVESCGPRFRKIWLQMVHRTLERAGPAFIKWGQWA 234

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
           ATRPDLFP+DLC +LS+LHS APEHSFAYTKKTIE+AFGR+LSEIF+ FEE PVASGSIA
Sbjct: 235 ATRPDLFPKDLCLQLSKLHSNAPEHSFAYTKKTIEKAFGRKLSEIFEEFEEVPVASGSIA 294

Query: 299 QVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD 358
           QVHRASLRF+YPGQK K  +VAVKVRHPGVGESIRRDFVIINL AKIS++IPA+KWLRLD
Sbjct: 295 QVHRASLRFQYPGQKSKSSLVAVKVRHPGVGESIRRDFVIINLVAKISTLIPALKWLRLD 354

Query: 359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC 418
           ESVQQF VFM+SQVDLAREA+HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE GE 
Sbjct: 355 ESVQQFGVFMLSQVDLAREASHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEHGES 414

Query: 419 VSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF 478
           V+RYVD ++GHE +K+ LAHIGTHALLKMLLVDNFIHADMHPGNILVR   KK+S   LF
Sbjct: 415 VARYVDGMEGHEWIKTRLAHIGTHALLKMLLVDNFIHADMHPGNILVR---KKASGGGLF 471

Query: 479 RS-KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
           ++ KPH++FLDVGMTAELSK DR NL++FFKAVARRDGRTAAE TL+LS++QNCPNP+AF
Sbjct: 472 KTKKPHIVFLDVGMTAELSKNDRENLLDFFKAVARRDGRTAAERTLKLSRKQNCPNPEAF 531

Query: 538 IE 539
           IE
Sbjct: 532 IE 533

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475969|ref|XP_003608270.1| aarF domain-containing protein kinase, putative [Medicago truncatula] gi|87240485|gb|ABD32343.1| Protein kinase-like [Medicago truncatula] gi|355509325|gb|AES90467.1| aarF domain-containing protein kinase, putative [Medicago truncatula]

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/540 (65%), Positives = 425/540 (78%), Gaps = 2/540 (0%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSV 60
           M +     +I RAA+S+L   +  +  +++   +++V   +   R Y  Y FP+ G  S+
Sbjct: 1   MDKFFMLGHIGRAAESILRIHKSRYLGVSRNAGLLSVAPNINRCRTYMQYKFPNEGCSSI 60

Query: 61  PVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRL-FYYSSFRDQIFPCISRIAQAF 119
                ++   + CS  + +  SA ++  H+++IAWK L   Y S        +  IAQA 
Sbjct: 61  MWRGARENFHKGCSFWNFTAFSAKNITAHKSRIAWKLLRKIYPSNGYSGSTSVHMIAQAV 120

Query: 120 SLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLV 179
           SLAL RS  LVP I AF  G+LA AQ+  ++   +PS NA    AQDG++++ +  + +V
Sbjct: 121 SLALARSCFLVPSIFAFACGELALAQQNQSDAGSYPSPNALCMSAQDGYSYMFAFAFVVV 180

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAA 239
           E ++LL RA+YL +LFSPSI+MAP AD FGP+FR++WL VV RTLE AGPAFIKWGQWAA
Sbjct: 181 EGLVLLGRAIYLAILFSPSILMAPLADYFGPEFRKMWLRVVHRTLERAGPAFIKWGQWAA 240

Query: 240 TRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQ 299
           TRPDLFP+D+C KL+ELHSKAPEHSF+YTKKTIE AFGR++SEIF+ FEE PVASGSIAQ
Sbjct: 241 TRPDLFPQDICTKLAELHSKAPEHSFSYTKKTIESAFGRKISEIFENFEELPVASGSIAQ 300

Query: 300 VHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE 359
           VHRASL++RYPGQ+ KP++VAVKVRHPGVGESIRRDF IIN  AK S  IPA+ WLRLDE
Sbjct: 301 VHRASLKYRYPGQQAKPMLVAVKVRHPGVGESIRRDFAIINFVAKSSKFIPALNWLRLDE 360

Query: 360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECV 419
           SVQQFAVFMMSQVDLAREAAHL+RFIYNFR+W+DVSFPKPVYPLVHPAVLVETYE GE V
Sbjct: 361 SVQQFAVFMMSQVDLAREAAHLNRFIYNFRQWRDVSFPKPVYPLVHPAVLVETYENGESV 420

Query: 420 SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFR 479
           S YVDELQGHE +KSALAHIG++ALLKMLLVDNFIHADMHPGNILVRV Q K ++K  F+
Sbjct: 421 SHYVDELQGHEGIKSALAHIGSNALLKMLLVDNFIHADMHPGNILVRVPQSK-ARKPFFK 479

Query: 480 SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
           SKPHVIFLDVGMTAELS +DRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP+PKA+IE
Sbjct: 480 SKPHVIFLDVGMTAELSGSDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPDPKAYIE 539

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42561917|ref|NP_172606.3| aarF domain-containing kinase [Arabidopsis thaliana] gi|332190608|gb|AEE28729.1| aarF domain-containing kinase [Arabidopsis thaliana]

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/542 (65%), Positives = 432/542 (79%), Gaps = 12/542 (2%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYG-FPSGGHCS 59
           MSRVL  + + +  QS+++N++   S+   Y       LR P  R YS  G  PS  +C+
Sbjct: 1   MSRVLISKIVGKQTQSLVSNQKDRVSQWGSYRTAFTAALRSPQLRTYSSSGRIPSNVYCT 60

Query: 60  VPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAF 119
               ++K     +   RS + A A +V +H AQIAW+RL Y  S R      IS IAQAF
Sbjct: 61  FAFRDLKGSFLSNHLSRSYTTAPARNVVSHHAQIAWRRLHYKYSER------ISTIAQAF 114

Query: 120 SLALTRSPLLVPGIIAFTSGQLAWAQRV-SAETEYFPSQNAFYTRAQDGHAFVTSVLYSL 178
           SL+LTRS LL+PGI+A T GQ+AWAQR   +   ++ S  + YTRA++G  F++S+L+S+
Sbjct: 115 SLSLTRSHLLIPGIVAVTCGQVAWAQRAPGSGINHYASDKSLYTRAKNGPIFLSSLLFSV 174

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           +E  IL+ RA Y+  LF+P+I+M    +S GP+FR++WL +V RTLE AGPAFIKWGQWA
Sbjct: 175 IEGFILIGRAFYIACLFTPTILMGLVVESCGPRFRKIWLEMVHRTLERAGPAFIKWGQWA 234

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
           ATRPDLFP+DLC +LS+LHS APEHSFAYTKKTIE+AFGR+LSEIF+ F+E PVASGSIA
Sbjct: 235 ATRPDLFPKDLCSQLSKLHSNAPEHSFAYTKKTIEKAFGRKLSEIFEEFDEVPVASGSIA 294

Query: 299 QVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD 358
           QVHRASLRF+YPGQK K  +VAVKVRHPGVGESIRRDFVIINL AKIS++IPA+KWLRLD
Sbjct: 295 QVHRASLRFQYPGQKSKSSLVAVKVRHPGVGESIRRDFVIINLVAKISTLIPALKWLRLD 354

Query: 359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC 418
           ESVQQF VFM+SQVDLAREA+HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE GE 
Sbjct: 355 ESVQQFGVFMLSQVDLAREASHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEHGES 414

Query: 419 VSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF 478
           V+RYVD ++GHE +K+ LAHIGTHALLKMLLVDNFIHADMHPGNILVR   KK+S+  LF
Sbjct: 415 VARYVDGMEGHEWIKTRLAHIGTHALLKMLLVDNFIHADMHPGNILVR---KKASRGGLF 471

Query: 479 RS-KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
           ++ KPH++FLDVGMTAEL+K DR NL++FFKAVARRDGRTAAE TL+LS++QNCPNP+AF
Sbjct: 472 KTKKPHIVFLDVGMTAELAKNDRENLLDFFKAVARRDGRTAAERTLKLSRKQNCPNPEAF 531

Query: 538 IE 539
           IE
Sbjct: 532 IE 533

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	581
TAIR|locus:2200096	624	AT1G11390 [Arabidopsis thalian	0.912	0.849	0.647	1.2e-182
TAIR|locus:2200903	621	AT1G61640 [Arabidopsis thalian	0.855	0.800	0.589	7.6e-151
DICTYBASE|DDB_G0267774	689	abkC "ABC1 family protein kina	0.476	0.402	0.446	9.8e-70
UNIPROTKB|C9JE15	590	ADCK2 "Uncharacterized aarF do	0.442	0.435	0.365	1e-55
UNIPROTKB|Q7Z695	626	ADCK2 "Uncharacterized aarF do	0.442	0.410	0.365	2.7e-55
UNIPROTKB|E2RRE7	627	ADCK2 "Uncharacterized protein	0.409	0.379	0.368	6.1e-53
UNIPROTKB|F1P1M5	544	ADCK2 "Uncharacterized protein	0.402	0.430	0.384	2.7e-52
RGD|1311058	616	Adck2 "aarF domain containing	0.390	0.368	0.362	1.6e-51
UNIPROTKB|E1BNG1	625	ADCK2 "Uncharacterized protein	0.376	0.350	0.368	1.2e-50
ASPGD|ASPL0000064939	685	AN6996 [Emericella nidulans (t	0.268	0.227	0.392	1e-49

TAIR|locus:2200096 AT1G11390 [Arabidopsis thaliana (taxid:3702)]

 Score = 1772 (628.8 bits), Expect = 1.2e-182, P = 1.2e-182
 Identities = 351/542 (64%), Positives = 423/542 (78%)

Query:     1 MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYG-FPSGGHCS 59
             MSRVL  + + +  QS+++N++   S+   Y       LR P  R YS  G  PS  +C+
Sbjct:     1 MSRVLISKIVGKQTQSLVSNQKDRVSQWGSYRTAFTAALRSPQLRTYSSSGRIPSNVYCT 60

Query:    60 VPVYNVKQXXXXXXXXXXXXXXXXXXXXTHQAQIAWKRLFYYSSFRDQIFPCISRIAQAF 119
                 ++K                     +H AQIAW+RL Y  S R      IS IAQAF
Sbjct:    61 FAFRDLKGSFLSNHLSRSYTTAPARNVVSHHAQIAWRRLHYKYSER------ISTIAQAF 114

Query:   120 SLALTRSPLLVPGIIAFTSGQLAWAQRVSAE-TEYFPSQNAFYTRAQDGHAFVTSVLYSL 178
             SL+LTRS LL+PGI+A T GQ+AWAQR       ++ S  + YTRA++G  F++S+L+S+
Sbjct:   115 SLSLTRSHLLIPGIVAVTCGQVAWAQRAPGSGINHYASDKSLYTRAKNGPIFLSSLLFSV 174

Query:   179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
             +E  IL+ RA Y+  LF+P+I+M    +S GP+FR++WL +V RTLE AGPAFIKWGQWA
Sbjct:   175 IEGFILIGRAFYIACLFTPTILMGLVVESCGPRFRKIWLEMVHRTLERAGPAFIKWGQWA 234

Query:   239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
             ATRPDLFP+DLC +LS+LHS APEHSFAYTKKTIE+AFGR+LSEIF+ F+E PVASGSIA
Sbjct:   235 ATRPDLFPKDLCSQLSKLHSNAPEHSFAYTKKTIEKAFGRKLSEIFEEFDEVPVASGSIA 294

Query:   299 QVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD 358
             QVHRASLRF+YPGQK K  +VAVKVRHPGVGESIRRDFVIINL AKIS++IPA+KWLRLD
Sbjct:   295 QVHRASLRFQYPGQKSKSSLVAVKVRHPGVGESIRRDFVIINLVAKISTLIPALKWLRLD 354

Query:   359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC 418
             ESVQQF VFM+SQVDLAREA+HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE GE 
Sbjct:   355 ESVQQFGVFMLSQVDLAREASHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEHGES 414

Query:   419 VSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF 478
             V+RYVD ++GHE +K+ LAHIGTHALLKMLLVDNFIHADMHPGNILVR   KK+S+  LF
Sbjct:   415 VARYVDGMEGHEWIKTRLAHIGTHALLKMLLVDNFIHADMHPGNILVR---KKASRGGLF 471

Query:   479 RSK-PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
             ++K PH++FLDVGMTAEL+K DR NL++FFKAVARRDGRTAAE TL+LS++QNCPNP+AF
Sbjct:   472 KTKKPHIVFLDVGMTAELAKNDRENLLDFFKAVARRDGRTAAERTLKLSRKQNCPNPEAF 531

Query:   538 IE 539
             IE
Sbjct:   532 IE 533

GO:0005886 "plasma membrane" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200903 AT1G61640 [Arabidopsis thaliana (taxid:3702)]

 Score = 1472 (523.2 bits), Expect = 7.6e-151, P = 7.6e-151
 Identities = 302/512 (58%), Positives = 385/512 (75%)

Query:    35 VAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQXXXXXXXXXXXXXXXXXXXXTH----Q 90
             + V +++P +R  S+     G H    ++NVK                     ++     
Sbjct:    27 INVSVKLPQFRIQSN-----GYHTLGLLHNVKGRFLGSNHHQLARRSYSIAVASNVVKQH 81

Query:    91 AQIAWKRLFYYSSF-RDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSA 149
             AQ++W RL    +  R    P IS+IAQA SL+L RS  L+PG++A T  Q+A+AQRV  
Sbjct:    82 AQVSWGRLVQRVTLSRSWNLPRISQIAQACSLSLARSHFLLPGLLALTYRQVAYAQRVVP 141

Query:   150 E-TEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSF 208
                 Y PS  + Y  + +    ++S+++S V+ V+L+ RALYL +LFSP+++MA    + 
Sbjct:   142 NPVVYSPSHISPYRSSINFPIVLSSLVFSAVKGVVLIGRALYLAILFSPNVIMALLGFAC 201

Query:   209 GPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYT 268
             GP++R+L   V+ RTLE AGPAFIK+GQW ATRPD F +DLC +LS+LHS APEHSFA+T
Sbjct:   202 GPRYRQLQYEVLHRTLEKAGPAFIKFGQWIATRPDRFNKDLCLQLSKLHSNAPEHSFAFT 261

Query:   269 KKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328
             KK+IE AFGR+LSEIF+ F+EAPVASGSIAQVHRASL+F+Y GQKVK   VAVKVRHP V
Sbjct:   262 KKSIENAFGRKLSEIFEEFDEAPVASGSIAQVHRASLKFQYAGQKVKSSEVAVKVRHPCV 321

Query:   329 GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
              E+++RDFVIIN  A++++ IP + WLRLDE VQQF+V+M+SQVDL+REA+HLSRFIYNF
Sbjct:   322 EETMKRDFVIINFVARLTTFIPGLNWLRLDECVQQFSVYMLSQVDLSREASHLSRFIYNF 381

Query:   389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
             R WKDVSFPKP+YPL+HPAVLVETYE GE V+RYVD  +G E+LK+ +AHIGT+ALLKML
Sbjct:   382 RGWKDVSFPKPIYPLIHPAVLVETYEHGESVARYVDGSEGQEKLKAKVAHIGTNALLKML 441

Query:   449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRS-KPHVIFLDVGMTAELSKTDRVNLVEFF 507
             LVDNFIHADMHPGNILVR     ++++ LFRS KPH++FLDVGMTAELSKTDR NL+ FF
Sbjct:   442 LVDNFIHADMHPGNILVR---PNNTRRGLFRSRKPHIVFLDVGMTAELSKTDRDNLLGFF 498

Query:   508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
             KAVARRDGRTAAE TL+LSKQQNCP+P+AFI+
Sbjct:   499 KAVARRDGRTAAERTLKLSKQQNCPDPQAFIK 530

GO:0005886 "plasma membrane" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

DICTYBASE|DDB_G0267774 abkC "ABC1 family protein kinase AbkC" [Dictyostelium discoideum (taxid:44689)]

 Score = 618 (222.6 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
 Identities = 130/291 (44%), Positives = 185/291 (63%)

Query:   179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
             +  V + +R L LG++  PS++  P    F P  +ELW  ++L T++ +G  +IK+GQW 
Sbjct:   151 INLVKIGIRVLELGLILLPSVLTFPCC--FIPGVKELWWQLLLETIQFSGTCWIKFGQWI 208

Query:   239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
             +TRPDLFP  L +K S+LHS+ P HSF +T ++IE +F G+ + ++F  F+E P+ASGS+
Sbjct:   209 STRPDLFPDLLIEKFSQLHSQCPSHSFQFTNESIENSFNGKSIKDLFLWFDEEPMASGSV 268

Query:   298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
             AQVH+A       G+     V  VKV HP V  +I+RDF II       S IP +KWL L
Sbjct:   269 AQVHKA---LTMDGK-----VAVVKVLHPNVKSNIKRDFFIIYSLIWAFSHIPEMKWLSL 320

Query:   358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417
              ES+ +F   MM Q DL  EA+HL+RF  NF+   +V FPKP+YPLV   VLVE++E G 
Sbjct:   321 PESILEFGKSMMKQADLELEASHLNRFNSNFKYNSEVIFPKPLYPLVSKEVLVESFEPGS 380

Query:   418 CVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVA 468
              +  ++ +   H      LA IG  A ++M+LVDNF+HAD+HPGN+LVR +
Sbjct:   381 PIMDFIKKNDHHN---PTLAKIGLSAYMQMMLVDNFVHADLHPGNVLVRTS 428

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0004672 "protein kinase activity" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|C9JE15 ADCK2 "Uncharacterized aarF domain-containing protein kinase 2" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 1.0e-55, Sum P(2) = 1.0e-55
 Identities = 101/276 (36%), Positives = 142/276 (51%)

Query:   295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
             GS A V RA +    P +    I VAVKV HPG+   +  D +++ + +++  V+P +KW
Sbjct:   285 GSNAGVSRAQVPGHQP-EATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKW 343

Query:   355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
             L L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE
Sbjct:   344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403

Query:   415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
             +   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   SS 
Sbjct:   404 ESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSS 462

Query:   475 KR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
             +            L  + P       ++ LD G+ AEL   D  N    F AV    G+ 
Sbjct:   463 QEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQR 522

Query:   518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSGVLRRVI 553
              AE  L  ++   C + + F   M +L +   +  I
Sbjct:   523 VAELILHHARASECRDVEGFKTEMAMLVTQARKNTI 558

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q7Z695 ADCK2 "Uncharacterized aarF domain-containing protein kinase 2" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
 Identities = 101/276 (36%), Positives = 142/276 (51%)

Query:   295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
             GS A V RA +    P +    I VAVKV HPG+   +  D +++ + +++  V+P +KW
Sbjct:   285 GSNAGVSRAQVPGHQP-EATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKW 343

Query:   355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
             L L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE
Sbjct:   344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403

Query:   415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
             +   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   SS 
Sbjct:   404 ESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSS 462

Query:   475 KR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
             +            L  + P       ++ LD G+ AEL   D  N    F AV    G+ 
Sbjct:   463 QEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQR 522

Query:   518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSGVLRRVI 553
              AE  L  ++   C + + F   M +L +   +  I
Sbjct:   523 VAELILHHARASECRDVEGFKTEMAMLVTQARKNTI 558

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E2RRE7 ADCK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 382 (139.5 bits), Expect = 6.1e-53, Sum P(2) = 6.1e-53
 Identities = 97/263 (36%), Positives = 141/263 (53%)

Query:   295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
             GS A + +AS+    P  + KP   I VAVKV HPG+   ++ D +++ + +++ +++P 
Sbjct:   286 GSNAVMSQASV----PADQPKPDHLIPVAVKVLHPGLLSQVQMDLLLMKMGSRVLALLPG 341

Query:   352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
             +KWL L E V++F   M+ Q+DL  EA +L  F  NF     V FP P+ P V   VLVE
Sbjct:   342 IKWLSLPEIVEEFEKLMVHQIDLRYEARNLEHFQCNFLNVNSVKFPTPLRPFVTRDVLVE 401

Query:   412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ-- 469
             TYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   
Sbjct:   402 TYEESVPVSSY-QQAGIPVDLKKKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGL 460

Query:   470 KKSSQKRL---------------FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
              +S + +L                R    ++ LD G+ AEL  TD  N    F AVA   
Sbjct:   461 SRSQEAQLQQMDVCDTLVATMAPARCPLRLVLLDAGIVAELQATDLSNFRAVFLAVAMGQ 520

Query:   515 GRTAAECTLRLSKQQNCPNPKAF 537
             G+  AE  L  ++   C + + F
Sbjct:   521 GQRVAELILHHARASECRDVEGF 543

GO:0005739 "mitochondrion" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|F1P1M5 ADCK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 379 (138.5 bits), Expect = 2.7e-52, Sum P(2) = 2.7e-52
 Identities = 97/252 (38%), Positives = 133/252 (52%)

Query:   319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
             VAVKV HPG+   ++ D  ++ L + I  ++P  KWL L E V++F   M+ Q+DL  EA
Sbjct:   225 VAVKVLHPGLVHQVQMDLFLMKLGSHIIGLLPGFKWLSLTEIVEEFEKLMLQQIDLHYEA 284

Query:   379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH 438
              +L RF  NF     V FP PV+PLV   VLVET+E+ E +SRY+      E L+  LA 
Sbjct:   285 RNLERFRQNFLDVDFVKFPTPVHPLVTTDVLVETFEESEPISRYLHTEVATE-LRQRLAK 343

Query:   439 IGTHALLKMLLVDNFIHADMHPGNILVR-VAQKKSSQKR-----------LFRSKPH--- 483
             +G   LLKM+ VDNF+HAD+HPGNILV+  A   +S K            +   +P    
Sbjct:   344 MGMDMLLKMVFVDNFVHADLHPGNILVQGTACISTSCKEQTAIVDLCDTLVVEVQPPFRQ 403

Query:   484 --VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWM 541
               ++ LD G+ AEL   D  N    F AV +  G   AE  L  ++   C + + F   M
Sbjct:   404 LCLVLLDAGIVAELQSADMQNFRAVFTAVVQGQGEKVAELILHHARANQCQDIERFKAEM 463

Query:   542 RLLPSGVLRRVI 553
               L + V R  I
Sbjct:   464 AELVTKVRRNTI 475

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

RGD|1311058 Adck2 "aarF domain containing kinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 365 (133.5 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
 Identities = 90/248 (36%), Positives = 129/248 (52%)

Query:   310 PGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366
             PGQ  K    I VAVKV HPG+   +  D +++ + ++   +IP VKWL L E V++F  
Sbjct:   286 PGQPPKSDHLIPVAVKVLHPGLLSQVYIDLLLMKIGSQALGLIPGVKWLSLPEIVEEFEK 345

Query:   367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
              M+ Q DL  EA +L  F +NF+    V FP P++PL+   +LVETYE+   VS Y  + 
Sbjct:   346 LMVQQTDLRYEAQNLEHFQHNFQNMASVKFPTPLHPLITRDILVETYEESVPVSSY-QQA 404

Query:   427 QGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV-- 484
                  LK  +A +G + L KM+ VDNF+H D+HPGNILV+ A   SS   + + +  V  
Sbjct:   405 GVPTDLKRKIAQLGINMLFKMIFVDNFVHGDLHPGNILVQGADGVSSSLEMQQQQVDVYD 464

Query:   485 ---------------IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ 529
                            + LD G+ A+L  +D  N    F AVA   G   AE  L  ++  
Sbjct:   465 TLVATIAPALCPLRLVLLDAGIVAKLQASDLRNFRAVFLAVAMGQGHRVAELMLHHAQAN 524

Query:   530 NCPNPKAF 537
              C + + F
Sbjct:   525 ECKDVEKF 532

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0016301 "kinase activity" evidence=IEA

UNIPROTKB|E1BNG1 ADCK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 361 (132.1 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
 Identities = 88/239 (36%), Positives = 128/239 (53%)

Query:   317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
             + VAVKV HPG+   ++ D +++ + +++ +V+P +KWL L E V++F   M+ Q+DL  
Sbjct:   305 VPVAVKVLHPGLLAQVQMDLLLMKMGSRVLTVLPGIKWLSLPEIVEEFEKLMVQQIDLRY 364

Query:   377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER-LKSA 435
             EA +L  F  NF     V FP P+ P V   VLVETYE+   VS Y  +  G    +K  
Sbjct:   365 EARNLELFQCNFLNVNSVKFPTPLRPFVTKDVLVETYEESVPVSSY--QHAGIPLDVKRK 422

Query:   436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ--KKSSQKRL---------------F 478
             +A +G + LLKM+ VDNF+HAD+HPGNILV+ A    +  + RL                
Sbjct:   423 IARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLAQGPEARLQPVDVCEALVVAVSPA 482

Query:   479 RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
             R    ++ LD G+ AEL   D  N    F AVA   G+  AE  L  ++   C + + F
Sbjct:   483 RCPLRLVLLDAGIVAELQAADLRNFRAVFMAVAMGQGQRVAELILHHARASECEDVEGF 541

GO:0005739 "mitochondrion" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

ASPGD|ASPL0000064939 AN6996 [Emericella nidulans (taxid:162425)]

 Score = 267 (99.0 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
 Identities = 62/158 (39%), Positives = 87/158 (55%)

Query:   312 QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ 371
             ++V    VAVKV HP V   IRRD  I++  A + + +P + WL   + V QF   M  Q
Sbjct:   288 RRVPSSYVAVKVLHPRVERLIRRDLRIMSFFASLLNAVPTMHWLSFPDEVAQFGEMMKLQ 347

Query:   372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER 431
             +DL  EA +L  F   FR      FP P        VL+E + QG  +S ++++  G   
Sbjct:   348 LDLRIEATNLKIFREKFRSRTTAWFPYPYLDYSTREVLIEEFAQGIPLSTFLEK--GGGV 405

Query:   432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ 469
              +  +A+ G  A L MLL+DNF+HAD+HPGNI+VR  Q
Sbjct:   406 YQHEIANEGLDAFLHMLLIDNFVHADLHPGNIMVRFYQ 443

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	581
COG0661	517	COG0661, AarF, Predicted unusual protein kinase [G	7e-74
TIGR01982	437	TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase	9e-61
PRK04750	537	PRK04750, ubiB, putative ubiquinone biosynthesis p	1e-41
pfam03109	117	pfam03109, ABC1, ABC1 family	2e-30

>gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only]

 Score =  244 bits (625), Expect = 7e-74
 Identities = 108/306 (35%), Positives = 148/306 (48%), Gaps = 23/306 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
             LE  GP FIK GQ  +TRPDL P +  ++L++L  + P   F   ++ IE   GR + 
Sbjct: 63  LALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIE 122

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+F  FE  P+AS SIAQVHRA L+    G++     VAVKV+ PG+ E I  D  ++  
Sbjct: 123 ELFSEFEPEPIASASIAQVHRAVLK---SGEE-----VAVKVQRPGIRERIEADLKLLRR 174

Query: 342 AAKISSVIPAVKW-LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A++   +P     L L E V +F   +  ++D  REAA+  RF  NF+   DV  PK  
Sbjct: 175 LARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVY 234

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      VL   +  G  +S  +  L+     +  LA +   A L+ LL D F HAD HP
Sbjct: 235 WEYTTRRVLTMEWIDGIKISD-IAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHP 293

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV             RS   ++ LD G+   L    R  L E   A   RD    AE
Sbjct: 294 GNILV-------------RSDGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAE 340

Query: 521 CTLRLS 526
             + L 
Sbjct: 341 LHVELG 346

Length = 517

>gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase

 Score =  207 bits (529), Expect = 9e-61
 Identities = 120/346 (34%), Positives = 161/346 (46%), Gaps = 35/346 (10%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQW 237
           LVE  I  +    L  L  P         S G + R          LE  GP FIK+GQ 
Sbjct: 19  LVESPIGPLSLRLLRRLLLPFSNRENRLMSRGERLR--------LALEELGPTFIKFGQT 70

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
            +TR DL P D+ ++LS L  + P   F   +K IE A G  L E+F  FEE P+A+ SI
Sbjct: 71  LSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASI 130

Query: 298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLR 356
           AQVHRA L     G++     VAVKV  PG+ ++I  D  ++  LA  +  + P  + LR
Sbjct: 131 AQVHRARL---VDGKE-----VAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLR 182

Query: 357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG 416
             E V++F   +  ++DL REAA+ S    NF+    V  P+  +      VL   +  G
Sbjct: 183 PTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDG 242

Query: 417 ECVSRY--VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
             +S    +DE  G +R   ALA     + L  +L D F HAD+HPGNI V         
Sbjct: 243 IPLSDIAALDE-AGLDR--KALAENLARSFLNQVLRDGFFHADLHPGNIFV--------- 290

Query: 475 KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
                    +I LD G+   LS+ DR  L E       RD R  AE
Sbjct: 291 ----LKDGKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAE 332

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437

>gnl|CDD|235310 PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed

 Score =  157 bits (399), Expect = 1e-41
 Identities = 102/298 (34%), Positives = 142/298 (47%), Gaps = 18/298 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DLFP D+  +L+ L  + P    A  +  IE+A G  + E 
Sbjct: 59  LEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEW 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           FD F+  P+AS SIAQVH A L+    G++     V VKV  P +   I  D  ++  LA
Sbjct: 119 FDDFDIKPLASASIAQVHFARLKDN--GRE-----VVVKVLRPDILPVIDADLALMYRLA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + L+  E V +F   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 RWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  VS  V  L+        LA  G       +  D F HADMHPGN
Sbjct: 232 YCSETVMVMERMYGIPVSD-VAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           I V     ++         P  I LD G+   L+K D+  L E F A   RD R  AE
Sbjct: 291 IFVSYDPPEN---------PRYIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAE 339

Length = 537

>gnl|CDD|111949 pfam03109, ABC1, ABC1 family

 Score =  114 bits (289), Expect = 2e-30
 Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 11/127 (8%)

Query: 275 AFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRR 334
             G  + E+F  F+E P+A+ SIAQVHRA L+    G++     VAVKV+ PGV + IR 
Sbjct: 2   ELGAPVEEVFAEFDEEPIAAASIAQVHRAVLKD---GEE-----VAVKVQRPGVKKRIRS 53

Query: 335 DFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           D  ++   AKI           LD  V +F   +  ++D  REAA+  +F  NF     V
Sbjct: 54  DLKLLKFLAKILKKFF--PGFDLDWLVDEFRKSLPQELDFLREAANAEKFRENFADLPWV 111

Query: 395 SFPKPVY 401
             PK VY
Sbjct: 112 YVPK-VY 117

This family includes ABC1 from yeast and AarF from E. coli. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex and E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins. Length = 117

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	581
COG0661	517	AarF Predicted unusual protein kinase [General fun	100.0
KOG1236	565	consensus Predicted unusual protein kinase [Genera	100.0
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	100.0
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	100.0
KOG1235	538	consensus Predicted unusual protein kinase [Genera	100.0
KOG1234	363	consensus ABC (ATP binding cassette) 1 protein [Ge	100.0
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	99.95
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.84
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.83
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.82
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.81
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.79
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.79
KOG0605	550	consensus NDR and related serine/threonine kinases	99.77
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.77
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.75
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.75
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.74
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.74
smart00090	237	RIO RIO-like kinase.	99.73
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.72
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.71
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.71
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.71
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.67
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.67
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.66
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.65
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.65
PRK14879	211	serine/threonine protein kinase; Provisional	99.65
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.64
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.64
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.63
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.63
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.62
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.62
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.62
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.61
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.61
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.6
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.6
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.6
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.6
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.6
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.6
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.6
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.58
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.58
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.58
KOG0578	550	consensus p21-activated serine/threonine protein k	99.58
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.58
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.58
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.58
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.57
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.57
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.57
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.57
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.57
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.57
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.57
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.57
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.57
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.57
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.57
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.57
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.56
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.56
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.56
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.56
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.56
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.55
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.55
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.55
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.55
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.55
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.55
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.55
KOG0198	313	consensus MEKK and related serine/threonine protei	99.55
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.55
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.54
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.54
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.54
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.54
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.54
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.54
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.54
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.54
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.54
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.54
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.54
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.54
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.54
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.53
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.53
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.53
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.53
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.53
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.53
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.52
PRK09188	365	serine/threonine protein kinase; Provisional	99.52
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.52
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.52
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.52
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.52
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.52
PTZ00284	467	protein kinase; Provisional	99.52
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.52
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.51
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.51
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.51
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.51
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.51
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.51
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.51
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.51
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.5
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.5
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.5
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.5
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.5
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.5
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.5
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.5
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.49
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.49
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.49
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.49
PTZ00036	440	glycogen synthase kinase; Provisional	99.49
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.49
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.49
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.48
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.48
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.48
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.48
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.48
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.48
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.48
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.47
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.47
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.47
PHA03212	391	serine/threonine kinase US3; Provisional	99.47
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.47
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.46
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.46
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.46
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.46
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.46
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.46
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.46
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.46
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.45
PTZ00283	496	serine/threonine protein kinase; Provisional	99.45
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.45
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.45
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.45
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.45
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.45
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.45
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.45
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.45
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.45
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.45
PTZ00267	478	NIMA-related protein kinase; Provisional	99.45
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.45
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.44
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.44
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.44
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.44
KOG0589	426	consensus Serine/threonine protein kinase [General	99.44
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.44
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.44
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.44
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.44
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.44
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.44
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.44
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.44
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.44
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.43
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.43
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.43
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.43
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.43
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.43
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.43
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.43
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.43
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.43
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.42
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.42
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.42
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.42
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.42
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.42
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.42
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.42
PHA02988	283	hypothetical protein; Provisional	99.42
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.42
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.41
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.41
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.41
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.41
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.41
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.41
KOG0610	459	consensus Putative serine/threonine protein kinase	99.41
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.41
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.41
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.41
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.41
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.41
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.41
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.41
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.41
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.41
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.4
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.4
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.4
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.4
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.4
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.4
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.4
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.4
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.4
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.4
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.4
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.4
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.4
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.4
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.4
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.4
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.4
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.4
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.4
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.4
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.4
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.4
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.4
PHA03207	392	serine/threonine kinase US3; Provisional	99.39
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.39
PRK12274	218	serine/threonine protein kinase; Provisional	99.39
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.39
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.39
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.39
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.39
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.39
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.39
PHA03211	461	serine/threonine kinase US3; Provisional	99.39
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.39
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.39
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.38
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.38
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.38
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.38
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.38
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.38
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.38
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.38
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.38
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.38
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.38
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.38
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.38
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.38
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.38
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.38
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.37
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.37
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.37
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.37
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.37
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.37
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.37
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.37
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.37
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.37
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.37
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.37
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.37
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.37
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.37
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.37
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.37
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.37
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	99.37
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.37
PRK10345	210	hypothetical protein; Provisional	99.37
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.37
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.36
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.36
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.36
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.36
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.36
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.36
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.36
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.36
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.36
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.36
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.36
PHA03209	357	serine/threonine kinase US3; Provisional	99.36
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.36
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.35
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.35
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.35
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.35
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.35
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.35
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.35
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.35
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.35
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.34
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.34
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.34
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.34
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.34
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.34
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.34
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.34
PHA02882	294	putative serine/threonine kinase; Provisional	99.34
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.34
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.34
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.33
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.33
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.33
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.33
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.33
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.33
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.33
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.33
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.33
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.33
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.33
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.33
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.33
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.33
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.32
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.32
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.32
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.31
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.31
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.31
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.31
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.31
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.31
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.31
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.31
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.3
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.3
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.3
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.3
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.3
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.3
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.3
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.29
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.29
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.29
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.29
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.29
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.28
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.28
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.28
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.28
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.28
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.27
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.27
PLN00009	294	cyclin-dependent kinase A; Provisional	99.27
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.27
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.27
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.27
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.26
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.26
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.26
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.26
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.26
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.25
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.25
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.25
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.25
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.24
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.24
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.24
PHA03210	501	serine/threonine kinase US3; Provisional	99.24
COG0478	304	RIO-like serine/threonine protein kinase fused to	99.23
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.23
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.23
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.22
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	99.22
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.22
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.21
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.21
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.21
KOG0586	596	consensus Serine/threonine protein kinase [General	99.2
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.19
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.18
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.18
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.17
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.17
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.16
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.14
KOG3653	534	consensus Transforming growth factor beta/activin	99.13
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.11
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.11
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.11
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.11
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.09
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.08
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.08
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.08
KOG3087	229	consensus Serine/threonine protein kinase [General	99.07
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.06
KOG1152	772	consensus Signal transduction serine/threonine kin	99.06
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.06
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.05
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.04
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.04
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.03
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.02
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.01
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.97
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.96
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.95
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.94
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.9
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.9
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.89
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.87
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.87
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.83
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.83
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.78
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.77
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.76
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.74
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.73
KOG2270	520	consensus Serine/threonine protein kinase involved	98.71
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.61
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	98.54
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.53
KOG0584	632	consensus Serine/threonine protein kinase [General	98.5
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	98.49
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.46
PRK10593	297	hypothetical protein; Provisional	98.45
PF01636	239	APH: Phosphotransferase enzyme family This family	98.43
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.43
PLN00181	793	protein SPA1-RELATED; Provisional	98.38
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.36
PRK05231	319	homoserine kinase; Provisional	98.33
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.27
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.26
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.26
KOG2268	465	consensus Serine/threonine protein kinase [Signal	98.24
PLN02756	418	S-methyl-5-thioribose kinase	98.15
PRK12396	409	5-methylribose kinase; Reviewed	98.08
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.06
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	98.01
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.97
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.9
PRK09902	216	hypothetical protein; Provisional	97.87
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.79
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.73
PRK06148	1013	hypothetical protein; Provisional	97.68
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.62
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.61
COG2334	331	Putative homoserine kinase type II (protein kinase	97.45
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.42
PLN02236	344	choline kinase	97.42
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.38
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.38
PRK06149	972	hypothetical protein; Provisional	97.35
PRK11768	325	serine/threonine protein kinase; Provisional	97.34
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.33
PLN02876	822	acyl-CoA dehydrogenase	97.32
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.16
KOG2269	531	consensus Serine/threonine protein kinase [Signal	97.15
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.98
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.78
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.74
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.72
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	96.48
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	96.23
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	95.95
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	95.82
PTZ00384	383	choline kinase; Provisional	95.78
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	95.31
PRK10271	188	thiK thiamine kinase; Provisional	95.27
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	94.44
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.15
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	93.46
PTZ00296	442	choline kinase; Provisional	93.18
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	91.47
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	90.96
KOG2686	366	consensus Choline kinase [Cell wall/membrane/envel	90.88
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	89.55
COG4857	408	Predicted kinase [General function prediction only	89.51
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	88.92
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	88.63
cd00142	219	PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like f	88.62
cd00892	237	PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-rela	88.45
smart00146	202	PI3Kc Phosphoinositide 3-kinase, catalytic domain.	88.33
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	87.98
KOG0590	601	consensus Checkpoint kinase and related serine/thr	87.97

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=100.00  E-value=2.1e-73  Score=624.48  Aligned_cols=339  Identities=33%  Similarity=0.488  Sum_probs=317.4

Q ss_pred             HHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCce
Q 008021          211 QFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEA  290 (581)
Q Consensus       211 ~~~~~~~~~l~~~le~lGp~fIKlGQ~lstr~dllP~e~~~~L~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~  290 (581)
                      ..++.-.++|+.+|++|||+|||+||++|||+|++|++|+++|++|||++||+|+++++++|++++|.+++++|++||++
T Consensus        52 ~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~  131 (517)
T COG0661          52 ELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPE  131 (517)
T ss_pred             HHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence            33555668999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccc-ccccccChhHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI-PAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~-p~l~~l~l~e~v~ef~~~l~  369 (581)
                      |||+||+||||+|++++        |++|||||||||+++.+..|+.+|+.++++.+.+ |+.+.+++.+++++|.+.+.
T Consensus       132 PiAsASIaQVH~A~L~s--------G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~  203 (517)
T COG0661         132 PIASASIAQVHRAVLKS--------GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR  203 (517)
T ss_pred             chhhhhHhhheeEEecC--------CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence            99999999999999986        6999999999999999999999999999999854 55567999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL  449 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~  449 (581)
                      .|+||++||+|+++|++||++.+.+++|++||++|+++||||||++|.++++...- +..+.....+++.++++|++|++
T Consensus       204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l-~~~g~d~k~ia~~~~~~f~~q~~  282 (517)
T COG0661         204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAAL-KSAGIDRKELAELLVRAFLRQLL  282 (517)
T ss_pred             HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHH-HhcCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999997532 22445567899999999999999


Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCC
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ  529 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~  529 (581)
                      .+||||+|||||||+|+       .+|      +++++|||+++.+++++|..+++++.|++++|++++++.+.++|..+
T Consensus       283 ~dgffHaDpHpGNi~v~-------~~g------~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~  349 (517)
T COG0661         283 RDGFFHADPHPGNILVR-------SDG------RIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVP  349 (517)
T ss_pred             hcCccccCCCccceEEe-------cCC------cEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCC
Confidence            99999999999999999       677      99999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhHh----hccccHHHHHHHHHHHHHHhhHH
Q 008021          530 NCPNPKAFIEWMRLLPSGV----LRRVIWSILLSACSNYLRKFGVI  571 (581)
Q Consensus       530 ~~~D~~~f~~~l~~l~~~~----~~~~~~~~ll~~~~~~lr~~~~~  571 (581)
                      +..|...|...++.+...+    +......+++..++++.++|++.
T Consensus       350 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  395 (517)
T COG0661         350 PDTDRDPLAAAIRAVLEPIYGKPLEEISFGEILDKLFEVARRFPMR  395 (517)
T ss_pred             CccchHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCcc
Confidence            9899999999999998775    45568899999999999988864

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=100.00  E-value=4.8e-70  Score=565.93  Aligned_cols=385  Identities=44%  Similarity=0.718  Sum_probs=353.3

Q ss_pred             HHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCC
Q 008021          185 LMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHS  264 (581)
Q Consensus       185 ~~R~~~l~~~f~p~~~~~p~~~~~~~~~~~~~~~~l~~~le~lGp~fIKlGQ~lstr~dllP~e~~~~L~~Lqd~~pp~~  264 (581)
                      -.|...+.+.|.|..+++|++.  .+++...|++.|++++|..||+|||+|||+|||+|+||+++|.+|++||.+++|||
T Consensus        91 ~~r~~~l~~fffpllll~~~t~--~~r~s~lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs  168 (565)
T KOG1236|consen   91 HLRLWLLLVFFFPLLLLYPLTY--LPRFSTLWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHS  168 (565)
T ss_pred             hhHHHHHHHHhhhHHHhccccc--cCchHHHHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCc
Confidence            4466778889999999999884  46788999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-ChhhhhccCCceeecccceeEEEEEEeccCCCCC--------CCCCeEEEEEEecCCchhhHHHH
Q 008021          265 FAYTKKTIERAFGR-RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQ--------KVKPIVVAVKVRHPGVGESIRRD  335 (581)
Q Consensus       265 ~~~~~~~le~elG~-~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~--------~~~g~~VAVKV~~P~v~~~i~~D  335 (581)
                      +..+++.+.+++|. +++|+|++|++.|||+|||||||+|+++..|-++        +...+.|||||.||+++++|+.|
T Consensus       169 ~a~T~k~l~qa~~~~~~~eiF~efn~~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~D  248 (565)
T KOG1236|consen  169 FAFTKKKLRQAFGVKKIEEIFSEFNREPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLD  248 (565)
T ss_pred             hHHHHHHHHHHHCcCcHHHHHHhcCCcccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHH
Confidence            99999999999998 9999999999999999999999999987433221        23468999999999999999999


Q ss_pred             HHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccC
Q 008021          336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQ  415 (581)
Q Consensus       336 l~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~  415 (581)
                      +.||+..+++.+++|.+.|+++++.+++|...+..|+|+++||.|+.+|..||++...|.+|+|+.++.++.||+++|++
T Consensus       249 l~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~  328 (565)
T KOG1236|consen  249 LGILGFGAKLINNVPDLSWLSLPLEVKQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYER  328 (565)
T ss_pred             HHHHhhhhhhhhhcCccccccCcchHHHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeeccccccccc-------------------
Q 008021          416 GECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR-------------------  476 (581)
Q Consensus       416 G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g-------------------  476 (581)
                      |.++..+++..++++...+.++..+++++++|++.+||+|+|+|||||+++..+......|                   
T Consensus       329 Gl~v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~  408 (565)
T KOG1236|consen  329 GLSVLRFVKWKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRS  408 (565)
T ss_pred             cccHHhhhhcccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhh
Confidence            9999999987666666788999999999999999999999999999999997654210000                   


Q ss_pred             -----------ccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhh
Q 008021          477 -----------LFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLP  545 (581)
Q Consensus       477 -----------~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~  545 (581)
                                 ..+.+|+++++|-|++.+++++++.||..+|.|+++.|+|+++++|++.++.++|+||+.|..++++++
T Consensus       409 e~~d~~~~~~~~~~~~P~lvflDtGiv~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv  488 (565)
T KOG1236|consen  409 EVRDARFTDSPDLEYEPTLVFLDTGIVTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLV  488 (565)
T ss_pred             hhhhhhhhccccccCCCeEEEecchhhhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHH
Confidence                       123579999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHh-----hccccHHHHHHHHHHHHHHhhHH
Q 008021          546 SGV-----LRRVIWSILLSACSNYLRKFGVI  571 (581)
Q Consensus       546 ~~~-----~~~~~~~~ll~~~~~~lr~~~~~  571 (581)
                      ..+     ++-.+.++++++|+...|+|-+.
T Consensus       489 ~~~~st~sl~tl~i~~ll~em~tmvreH~V~  519 (565)
T KOG1236|consen  489 LKARSTKSLRTLNIGDLLSEMFTMVREHHVR  519 (565)
T ss_pred             HHhhhhcccCcCcHHHHHHHHHHHHHHhhee
Confidence            886     45579999999999999999753

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=100.00  E-value=2.3e-68  Score=588.35  Aligned_cols=338  Identities=31%  Similarity=0.415  Sum_probs=312.3

Q ss_pred             HHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccc
Q 008021          217 LHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGS  296 (581)
Q Consensus       217 ~~~l~~~le~lGp~fIKlGQ~lstr~dllP~e~~~~L~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGS  296 (581)
                      .++++.+|+++||+|||+||++|||+|++|++||++|++|||++||+|+++++++++++||.+++++|.+||++|||+||
T Consensus        52 ~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaS  131 (537)
T PRK04750         52 GERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASAS  131 (537)
T ss_pred             HHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhc-ccccccccChhHHHHHHHHHHHHHHHHH
Q 008021          297 IAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLA  375 (581)
Q Consensus       297 igQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~-~~p~l~~l~l~e~v~ef~~~l~~ElDf~  375 (581)
                      +||||+|+++++       |++|||||+||++.+.|..|+++|+.++++.+ ..|..+.+++.+++++|.+.+.+|+||.
T Consensus       132 iaQVh~A~l~~~-------G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~  204 (537)
T PRK04750        132 IAQVHFARLKDN-------GREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM  204 (537)
T ss_pred             ccEEEEEEECCC-------CCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence            999999999874       69999999999999999999999999999887 5788888999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEe
Q 008021          376 REAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH  455 (581)
Q Consensus       376 ~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H  455 (581)
                      +|++|+.+|+++|.+.+.+++|++|+++|+++||||||++|.+++++.. ....+.....+++.+++.++.|++.+||||
T Consensus       205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~-l~~~g~d~~~la~~~v~~~~~Qif~~GffH  283 (537)
T PRK04750        205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAA-LRAAGTDMKLLAERGVEVFFTQVFRDGFFH  283 (537)
T ss_pred             HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHH-HHhcCCCHHHHHHHHHHHHHHHHHhCCeee
Confidence            9999999999999999999999999999999999999999999998532 122223456799999999999999999999


Q ss_pred             cCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHH
Q 008021          456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPK  535 (581)
Q Consensus       456 ~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~  535 (581)
                      +|||||||+|+.+.+   .      .++++++|||+++.+++++|..+.+++.|+.++|++++++.++++|..++..|.+
T Consensus       284 aDpHPGNIlv~~~g~---~------~~~i~llDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~  354 (537)
T PRK04750        284 ADMHPGNIFVSYDPP---E------NPRYIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVE  354 (537)
T ss_pred             CCCChHHeEEecCCC---C------CCeEEEEecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHH
Confidence            999999999982211   2      2389999999999999999999999999999999999999999999998889999


Q ss_pred             HHHHHHHHhhhHhh----ccccHHHHHHHHHHHHHHhhHH
Q 008021          536 AFIEWMRLLPSGVL----RRVIWSILLSACSNYLRKFGVI  571 (581)
Q Consensus       536 ~f~~~l~~l~~~~~----~~~~~~~ll~~~~~~lr~~~~~  571 (581)
                      .|..++..++..++    ++.+.++++.+++++.|+|++-
T Consensus       355 ~l~~~i~~~~~~~~~~~l~~i~~~~~l~~l~~~~r~~~~~  394 (537)
T PRK04750        355 ELEFAIRAVCEPIFDKPLAEISFGHVLLRLFNTARRFNVE  394 (537)
T ss_pred             HHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHCCCc
Confidence            99999999988864    5678999999999999999864

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=100.00  E-value=1.5e-65  Score=557.69  Aligned_cols=332  Identities=33%  Similarity=0.465  Sum_probs=308.7

Q ss_pred             HHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccc
Q 008021          217 LHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGS  296 (581)
Q Consensus       217 ~~~l~~~le~lGp~fIKlGQ~lstr~dllP~e~~~~L~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGS  296 (581)
                      .++++++++++||+|||+||++|||+|++|++||++|++|||++||+|+++++++++++||.+++++|.+||++|||+||
T Consensus        50 ~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plasaS  129 (437)
T TIGR01982        50 GERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAAS  129 (437)
T ss_pred             HHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceeeee
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhc-ccccccccChhHHHHHHHHHHHHHHHHH
Q 008021          297 IAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLA  375 (581)
Q Consensus       297 igQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~-~~p~l~~l~l~e~v~ef~~~l~~ElDf~  375 (581)
                      +||||+|++++        |++||||||||++.+.+..|+.+++.++++.+ ..|..+.+++.+++++|...+.+|+||.
T Consensus       130 igQVh~A~l~~--------G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       130 IAQVHRARLVD--------GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             hhheEEEEecC--------CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            99999999975        69999999999999999999999999998876 5687788899999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEe
Q 008021          376 REAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH  455 (581)
Q Consensus       376 ~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H  455 (581)
                      +||+|+.+|+++|++.+.+.+|++|+++|+++||||||++|.++.++..... .......++..+++.++.|+|.+|++|
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~ia~~~~~~~l~ql~~~g~~H  280 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLDRKALAENLARSFLNQVLRDGFFH  280 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCCHHHHHHHHHHHHHHHHHhCCcee
Confidence            9999999999999999999999999999999999999999999998764311 112345688888888999999999999


Q ss_pred             cCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHH
Q 008021          456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPK  535 (581)
Q Consensus       456 ~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~  535 (581)
                      +|||||||+++       ++|      +++++|||+++.++++.+..+.+++.|++.+|++.+++.+.+++..+...|.+
T Consensus       281 ~D~hPgNilv~-------~~g------~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~  347 (437)
T TIGR01982       281 ADLHPGNIFVL-------KDG------KIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMA  347 (437)
T ss_pred             CCCCcccEEEC-------CCC------cEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHH
Confidence            99999999998       667      89999999999999999999999999999999999999999999988889999


Q ss_pred             HHHHHHHHhhhHhh----ccccHHHHHHHHHHHHHHhhH
Q 008021          536 AFIEWMRLLPSGVL----RRVIWSILLSACSNYLRKFGV  570 (581)
Q Consensus       536 ~f~~~l~~l~~~~~----~~~~~~~ll~~~~~~lr~~~~  570 (581)
                      .|..++..++..+.    .+.+.++++.+++++.++|++
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (437)
T TIGR01982       348 EFEQAIRAIGEPIFGQPLKEISVGRLLAGLFKITRDFNM  386 (437)
T ss_pred             HHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHCCc
Confidence            99999999987753    456788999999999998875

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=100.00  E-value=5.7e-65  Score=556.12  Aligned_cols=305  Identities=30%  Similarity=0.438  Sum_probs=277.0

Q ss_pred             HHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccce
Q 008021          218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI  297 (581)
Q Consensus       218 ~~l~~~le~lGp~fIKlGQ~lstr~dllP~e~~~~L~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSi  297 (581)
                      ++|+++++.|||+|||+||.+|||+||+|+||.++|+.|||++||.|++++.+++++|+|.+++++|.+||++|||+||+
T Consensus        95 ~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASl  174 (538)
T KOG1235|consen   95 ERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASL  174 (538)
T ss_pred             HHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcch
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhc-ccccccccChhHHHHHHHHHHHHHHHHHH
Q 008021          298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAR  376 (581)
Q Consensus       298 gQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~-~~p~l~~l~l~e~v~ef~~~l~~ElDf~~  376 (581)
                      ||||+|++++        |+.||||||||++++.+..|+.+++.++...+ .+|.++   +.-+++|+++.+.+|+||.+
T Consensus       175 aQVhrA~L~~--------G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~---~~~lvdE~~~~L~~ELDF~~  243 (538)
T KOG1235|consen  175 AQVHRARLKN--------GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFD---LVWLVDEIAKSLPQELDFTK  243 (538)
T ss_pred             hheEEEEecC--------CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCc---hhhHHHHHHhhhHhhcchHH
Confidence            9999999986        69999999999999999999999999999886 578665   56678999999999999999


Q ss_pred             HHHHHHHHHHhcccCC---CcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCe
Q 008021          377 EAAHLSRFIYNFRRWK---DVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNF  453 (581)
Q Consensus       377 Ea~nl~rf~~~f~~~~---~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~  453 (581)
                      ||+|.++|+++|++.+   .|++|++||++|+++||||||++|.+++|.. .....+-.+..++..+.+++++||+.+||
T Consensus       244 EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~-~i~~~gi~~~~i~~~l~~~~~~qIf~~Gf  322 (538)
T KOG1235|consen  244 EAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLD-AIDKRGISPHDILNKLVEAYLEQIFKTGF  322 (538)
T ss_pred             HHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHH-HHHHcCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999988   7999999999999999999999999999863 33344455678999999999999999999


Q ss_pred             EecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCC
Q 008021          454 IHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPN  533 (581)
Q Consensus       454 ~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D  533 (581)
                      ||||||||||+|+.++   ..++      +++++|||+++.+++..|..++++|.|++..|...+.+...+++... ..+
T Consensus       323 fHaDPHPGNilv~~~~---~~~~------~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~-d~~  392 (538)
T KOG1235|consen  323 FHADPHPGNILVRPNP---EGDE------EIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL-DDL  392 (538)
T ss_pred             ccCCCCCCcEEEecCC---CCCc------cEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc-chh
Confidence            9999999999999322   1233      99999999999999999999999999999988888888887777765 446


Q ss_pred             HHHHHHHHHHh
Q 008021          534 PKAFIEWMRLL  544 (581)
Q Consensus       534 ~~~f~~~l~~l  544 (581)
                      ..-|.++|...
T Consensus       393 ~~~fa~~l~~~  403 (538)
T KOG1235|consen  393 YPLFATALTGR  403 (538)
T ss_pred             hhhhHHHHhCC
Confidence            66777777664

>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]

Probab=100.00  E-value=8.5e-33  Score=275.36  Aligned_cols=264  Identities=23%  Similarity=0.254  Sum_probs=245.4

Q ss_pred             CCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEE
Q 008021          242 PDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAV  321 (581)
Q Consensus       242 ~dllP~e~~~~L~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAV  321 (581)
                      ..++|+...+.|++.++.+-.+|..++.+++.+++|.+|.+-|++||+.|.+++||||||+|++++        |.+|||
T Consensus         7 ~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~--------g~eVav   78 (363)
T KOG1234|consen    7 GSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLAD--------GPEVAV   78 (363)
T ss_pred             CCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcC--------CCeeee
Confidence            467899999999999999999999999999999999999999999999999999999999999986        699999


Q ss_pred             EEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc
Q 008021          322 KVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY  401 (581)
Q Consensus       322 KV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~  401 (581)
                      |||+||+.+.|+.|+..+..+++....+|.  .+.++..++..++.|..|.||.+||....+|+..+++++++++|.++.
T Consensus        79 KiQYPGva~sI~SD~~nl~~lLn~s~llPk--GLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~  156 (363)
T KOG1234|consen   79 KIQYPGVARSIDSDANNLSRLLNFSGLLPK--GLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVD  156 (363)
T ss_pred             ecCCCchhhhccCcHHHHHHHHhhcccccc--cccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHH
Confidence            999999999999999999999998888884  677889999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCC
Q 008021          402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK  481 (581)
Q Consensus       402 ~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~  481 (581)
                      ++|+.+||+||++.|.+|....   ...+..+..++..+++..++.|++..|+..||.-+|++.+.      ...     
T Consensus       157 Elct~rvlt~el~~G~pid~~~---~~sQ~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~------~tk-----  222 (363)
T KOG1234|consen  157 ELCTVRVLTLELGQGLPIDKTA---KLSQETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNG------RTK-----  222 (363)
T ss_pred             hhccchhhhhhhhcCccchhhh---cccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCC------Ccc-----
Confidence            9999999999999999998753   23456678899999999999999999999999999999982      222     


Q ss_pred             CeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCC
Q 008021          482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQN  530 (581)
Q Consensus       482 ~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~  530 (581)
                       +|.|+|||.+++.+.+.-..+++++.|.+.+|.+.+.+.-.+++.-..
T Consensus       223 -~i~LlDFGAsr~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg  270 (363)
T KOG1234|consen  223 -KIELLDFGASREYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLTG  270 (363)
T ss_pred             -eEEEEeccccccccHHHHHHHHHHHHHHHhcchHHHHHHHHHhccccc
Confidence             899999999999999999999999999999999999999999988654

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=99.95  E-value=2.7e-28  Score=220.45  Aligned_cols=119  Identities=41%  Similarity=0.621  Sum_probs=113.6

Q ss_pred             HHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccccc
Q 008021          274 RAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVK  353 (581)
Q Consensus       274 ~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~  353 (581)
                      ++||.+++++|++||++||||||+||||+|++++        |++|||||+||++++.+..|+.+|+.++++++.++...
T Consensus         1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~--------g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~   72 (119)
T PF03109_consen    1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKD--------GEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFR   72 (119)
T ss_pred             CCcCCCHHHHHHHCCcchhhheehhhheeeeecc--------cchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence            4799999999999999999999999999999986        69999999999999999999999999999998776666


Q ss_pred             ccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccc
Q 008021          354 WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV  400 (581)
Q Consensus       354 ~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~  400 (581)
                      ++++.+++++|.+.+.+|+||++||+|+++|+++|++.+++++|++|
T Consensus        73 ~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy  119 (119)
T PF03109_consen   73 RLDLEEIVDEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY  119 (119)
T ss_pred             ccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence            88999999999999999999999999999999999999999999986

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.84  E-value=1.6e-20  Score=196.04  Aligned_cols=203  Identities=18%  Similarity=0.181  Sum_probs=133.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||+||||.||+|+++++       |..||||-....                               .......+.+
T Consensus        15 ~~~iG~GsfavVykg~h~~~-------~~~VAIK~i~~~-------------------------------~l~~k~~e~L   56 (429)
T KOG0595|consen   15 SREIGSGSFAVVYKGRHKKS-------GTEVAIKCIAKK-------------------------------KLNKKLVELL   56 (429)
T ss_pred             hhhccCcceEEEEEeEeccC-------CceEEeeeehhh-------------------------------ccCHHHHHHH
Confidence            34499999999999999986       799999964321                               0112223445


Q ss_pred             HHHHHHHHHHH--HHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch-hhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAA--HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE-RLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~--nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~-~~~~~la~~~i~a~l  445 (581)
                      ..|+.+..|.+  |+.++.+......             .-+||||||+|++|++|+....... ...+.+..++. +.+
T Consensus        57 ~~Ei~iLkel~H~nIV~l~d~~~~~~-------------~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA-~al  122 (429)
T KOG0595|consen   57 LSEIKILKELKHPNIVRLLDCIEDDD-------------FIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLA-SAL  122 (429)
T ss_pred             HHHHHHHHhcCCcceeeEEEEEecCC-------------eEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHH-HHH
Confidence            55666655543  4444433332222             2359999999999999997643222 22222333333 348


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh-cHHHHHHHHHh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR-DGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~-D~~~~~e~ll~  524 (581)
                      +.|++++||||||||.|||+.....   .+    ..+.+++.|||+++.+.+..-       .+-+.+ +.|-|+|.+ .
T Consensus       123 q~L~~~~IiHRDLKPQNiLLs~~~~---~~----~~~~LKIADFGfAR~L~~~~~-------a~tlcGSplYMAPEV~-~  187 (429)
T KOG0595|consen  123 QFLHENNIIHRDLKPQNILLSTTAR---ND----TSPVLKIADFGFARFLQPGSM-------AETLCGSPLYMAPEVI-M  187 (429)
T ss_pred             HHHHHCCeeeccCCcceEEeccCCC---CC----CCceEEecccchhhhCCchhH-------HHHhhCCccccCHHHH-H
Confidence            8899999999999999999983211   11    116899999999999986432       222334 455566665 4


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILL  558 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll  558 (581)
                      ...++...|.|+.+..+.+++.+.  ++...-.+|+
T Consensus       188 ~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~  223 (429)
T KOG0595|consen  188 SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELL  223 (429)
T ss_pred             hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHH
Confidence            577777889999999999998873  4433334444

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.83  E-value=8.4e-20  Score=177.23  Aligned_cols=183  Identities=19%  Similarity=0.182  Sum_probs=117.5

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      .+||+||+||||+|++. +       |+.||||+.+|+... ...+...+.....   +....+..++...+.       
T Consensus         3 ~~ig~G~~~~Vy~a~~~-~-------g~~vavKv~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------   63 (190)
T cd05145           3 GCISTGKEANVYHARTG-D-------GEELAVKIYKTSTLS-FKDRDKYIEGDPR---FRSRYSKSNPRKLVF-------   63 (190)
T ss_pred             ceeecCCCcEEEEEEcC-C-------CCEEEEEEEEcCcce-EeeHHHHhcCCcc---cccccccCCHHHHHH-------
Confidence            68999999999999986 3       699999999998532 1221111110000   000000112222222       


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHH-HHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRY-VDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~-l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                        ..+.+|.+++.++..     +++.+|.++.  ....+|||||++|.++... +............++..++.+ +..+
T Consensus        64 --~~~~~E~~~l~~l~~-----~~i~~p~~~~--~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~-l~~l  133 (190)
T cd05145          64 --AWAEKEFRNLKRLYE-----AGVPVPEPIL--LKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQ-MRRL  133 (190)
T ss_pred             --HHHHHHHHHHHHHHh-----CCCCCceEEE--ecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHH-HHHH
Confidence              223578888888864     3566777764  3456999999999865432 322222222334566666655 6677


Q ss_pred             hh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          449 LV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       449 ~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      |. .|++|+||||+|||++       . +      +++|+|||+++.++...       ..+++.+|...+...+
T Consensus       134 H~~~givHrDlkP~NIll~-------~-~------~~~liDFG~a~~~~~~~-------~~~~~~~~~~~~~~~~  187 (190)
T cd05145         134 YQEAGLVHGDLSEYNILYH-------D-G------KPYIIDVSQAVELDHPN-------ALEFLRRDIRNINRFF  187 (190)
T ss_pred             HHhCCEecCCCChhhEEEE-------C-C------CEEEEEcccceecCCCC-------HHHHHHHHHHHHHHHh
Confidence            87 9999999999999997       2 3      79999999999987753       3345678887776554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.82  E-value=9.4e-20  Score=184.16  Aligned_cols=188  Identities=21%  Similarity=0.191  Sum_probs=137.8

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      .-+|+||+|.|++++.++|       |+.||||.....-.                            +   ....+..+
T Consensus         8 gkvGEGSYGvV~KCrnk~T-------gqIVAIKkF~Esed----------------------------d---~~VkKIAl   49 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCRNKDT-------GQIVAIKKFVESED----------------------------D---PVVKKIAL   49 (396)
T ss_pred             hccccCcceEEEEeccCCc-------ccEEEEEeeccCCc----------------------------c---HHHHHHHH
Confidence            3589999999999999997       89999996432100                            0   12233445


Q ss_pred             HHHHHHHHH--HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch-hhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREA--AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE-RLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea--~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~-~~~~~la~~~i~a~l~  446 (581)
                      +|+.+....  .|+..+.+.|+....++             ||.|||+-.-|.++-..+.+.. ..-..+....+++ +.
T Consensus        50 REIrmLKqLkH~NLVnLiEVFrrkrklh-------------LVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~a-i~  115 (396)
T KOG0593|consen   50 REIRMLKQLKHENLVNLIEVFRRKRKLH-------------LVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKA-IH  115 (396)
T ss_pred             HHHHHHHhcccchHHHHHHHHHhcceeE-------------EEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHH-hh
Confidence            666665554  37777777777666555             9999999888877644332221 1112233333333 66


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|.+|++|||+||+||||+       ..|      .++|+|||+++.++. --.+    ++-.+...||+++|+++.-.
T Consensus       116 ~cHk~n~IHRDIKPENILit-------~~g------vvKLCDFGFAR~L~~-pgd~----YTDYVATRWYRaPELLvGDt  177 (396)
T KOG0593|consen  116 FCHKNNCIHRDIKPENILIT-------QNG------VVKLCDFGFARTLSA-PGDN----YTDYVATRWYRAPELLVGDT  177 (396)
T ss_pred             hhhhcCeecccCChhheEEe-------cCC------cEEeccchhhHhhcC-Ccch----hhhhhhhhhccChhhhcccC
Confidence            78899999999999999999       777      999999999999874 1223    33446788999999999988


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++.++|+|+.+|.+.||+++
T Consensus       178 qYG~pVDiWAiGCv~aEl~~G  198 (396)
T KOG0593|consen  178 QYGKPVDIWAIGCVFAELLTG  198 (396)
T ss_pred             cCCCcccchhhhHHHHHHhcC
Confidence            888999999999999999988

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.81  E-value=1e-19  Score=199.41  Aligned_cols=207  Identities=16%  Similarity=0.066  Sum_probs=147.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||||-||.++.|       ++.|||||.+-...-                                     .
T Consensus       191 ~e~LGkGtFGQVvk~~d~~T-------~e~VAIKIiKN~k~f-------------------------------------~  226 (586)
T KOG0667|consen  191 LEVLGKGSFGQVVKAYDHKT-------GEIVAIKIIKNKKRF-------------------------------------L  226 (586)
T ss_pred             EEEecccccceeEEEEecCC-------CcEEEEEeeccChHH-------------------------------------H
Confidence            57899999999999999987       799999997654110                                     0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcch---hhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGHE---RLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~~---~~~~~la~~~i~a  443 (581)
                      .++   ..|.+-++++.+. .......+-+.+.-+  -...+||.|.+ +..|.++++...-.+   ..-+.++..++.+
T Consensus       227 ~Q~---~~Ei~iL~~ln~~-d~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~  301 (586)
T KOG0667|consen  227 RQA---QIEIRILELLNKH-DPDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTA  301 (586)
T ss_pred             HHH---HHHHHHHHHHhcc-CCCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence            000   1234444444421 112222333333333  34458999988 678999987643222   2234566666655


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       |..|++.|+|||||||+|||+.       .-+    +++|++||||.+...++... .       -++..+|+++|++|
T Consensus       302 -L~~L~~l~IIHcDLKPENILL~-------~~~----r~~vKVIDFGSSc~~~q~vy-t-------YiQSRfYRAPEVIL  361 (586)
T KOG0667|consen  302 -LLFLHELGIIHCDLKPENILLK-------DPK----RSRIKVIDFGSSCFESQRVY-T-------YIQSRFYRAPEVIL  361 (586)
T ss_pred             -HHHHHhCCeeeccCChhheeec-------cCC----cCceeEEecccccccCCcce-e-------eeeccccccchhhc
Confidence             7788999999999999999997       221    34899999999998766543 2       25788999999999


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHHH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNYL  565 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~l  565 (581)
                      .+- +...+|+|.|+|.++||+.|.  +...+.-+++..+..++
T Consensus       362 Glp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~l  404 (586)
T KOG0667|consen  362 GLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVL  404 (586)
T ss_pred             cCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHh
Confidence            854 556899999999999999994  88888889998888876

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.79  E-value=1.1e-18  Score=169.95  Aligned_cols=167  Identities=17%  Similarity=0.207  Sum_probs=101.7

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      ..||+|++|+||+|++. +       |++||||+.+++.......| ..+....++...++   ..++...+..+     
T Consensus         3 ~~ig~G~~~~Vy~a~~~-~-------g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~-----   65 (190)
T cd05147           3 GCISTGKEANVYHATTA-N-------GEERAIKIYKTSILVFKDRD-RYVSGEFRFRHGYC---KSNPRKMVRTW-----   65 (190)
T ss_pred             CccccccceEEEEEECC-C-------CCEEEEEEEEecccccccHH-HhhcCCchhhcccc---CCCHHHHHHHH-----
Confidence            57999999999999986 3       69999999998754322222 11100000000000   11222222221     


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHH-HhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV-DELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l-~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                          ..+|.+++.++..     .++..|.++  .....+|||||++|.++.... ....-....-..++..++. .+.++
T Consensus        66 ----~~~E~~~l~~l~~-----~~v~~p~~~--~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~-~L~~l  133 (190)
T cd05147          66 ----AEKEMRNLKRLVT-----AGIPCPEPI--LLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQ-IMRIL  133 (190)
T ss_pred             ----HHHHHHHHHHHHH-----CCCCCCcEE--EecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHH-HHHHH
Confidence                2468888888854     244445554  345569999999997765432 2211111111223333333 36777


Q ss_pred             -hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh
Q 008021          449 -LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD  499 (581)
Q Consensus       449 -~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~  499 (581)
                       |..|++|+||||+|||++       + +      +++|+|||++.......
T Consensus       134 ~H~~giiHrDlkP~NIli~-------~-~------~v~LiDFG~a~~~~~~~  171 (190)
T cd05147         134 YQDCRLVHADLSEYNLLYH-------D-G------KLYIIDVSQSVEHDHPH  171 (190)
T ss_pred             HHhCCcccCCCCHHHEEEE-------C-C------cEEEEEccccccCCCcC
Confidence             689999999999999998       3 4      79999999998665543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.79  E-value=6.6e-19  Score=175.45  Aligned_cols=205  Identities=15%  Similarity=0.075  Sum_probs=149.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-+|+|.+|.||+|+...+       |+.||||-.+.+                               +.-+.+..+.
T Consensus         7 ~~~lGEG~~gvVyka~d~~t-------~~~VAIKKIkl~-------------------------------~~kdGi~~ta   48 (318)
T KOG0659|consen    7 LEKLGEGTYGVVYKARDTET-------GKRVAIKKIKLG-------------------------------NAKDGINRTA   48 (318)
T ss_pred             hhhhcCcceEEEEEEEecCC-------CcEEEEEEeecc-------------------------------ccccCccHHH
Confidence            46799999999999999887       799999976655                               1112233456


Q ss_pred             HHHHHHHHHHH--HHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHH---HHHHHHH
Q 008021          369 MSQVDLAREAA--HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL---AHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~--nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~l---a~~~i~a  443 (581)
                      .+|+.+.+|.+  |+..+.+.|-...++.             ||.||++- +|...+++... ...+..+   +.+..+ 
T Consensus        49 lREIK~Lqel~h~nIi~LiD~F~~~~~l~-------------lVfEfm~t-dLe~vIkd~~i-~l~pa~iK~y~~m~Lk-  112 (318)
T KOG0659|consen   49 LREIKLLQELKHPNIIELIDVFPHKSNLS-------------LVFEFMPT-DLEVVIKDKNI-ILSPADIKSYMLMTLK-  112 (318)
T ss_pred             HHHHHHHHHccCcchhhhhhhccCCCceE-------------EEEEeccc-cHHHHhccccc-ccCHHHHHHHHHHHHH-
Confidence            67788877764  7777777776655554             99999974 57766654211 1111111   222222 


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                      -+..+|.+.++|||+||.|+|++       ++|      ++++.|||+++.+.+.++..--.     +-..+|++.|++.
T Consensus       113 Gl~y~H~~~IlHRDlKPnNLLis-------~~g------~lKiADFGLAr~f~~p~~~~~~~-----V~TRWYRAPELLf  174 (318)
T KOG0659|consen  113 GLAYCHSKWILHRDLKPNNLLIS-------SDG------QLKIADFGLARFFGSPNRIQTHQ-----VVTRWYRAPELLF  174 (318)
T ss_pred             HHHHHHhhhhhcccCCccceEEc-------CCC------cEEeecccchhccCCCCcccccc-----eeeeeccChHHhc
Confidence            26678899999999999999999       788      99999999999888776655433     5568999999999


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH--hhccccHHHHHHHHHHHH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG--VLRRVIWSILLSACSNYL  565 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~--~~~~~~~~~ll~~~~~~l  565 (581)
                      ..-.+...+|+|+.+|.++||+.+  .+....-=++++-++++|
T Consensus       175 Gsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~L  218 (318)
T KOG0659|consen  175 GSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRAL  218 (318)
T ss_pred             cchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHc
Confidence            887788899999999999999987  366655445555555544

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.77  E-value=6.1e-18  Score=181.77  Aligned_cols=198  Identities=17%  Similarity=0.163  Sum_probs=129.1

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ++|+ -++||.|+||+||.|+-++|       |+.+|+|+++..       |+                           
T Consensus       141 ~DFe~Lk~IgkGAfGeVrLarKk~T-------g~iyAmK~LkKS-------~M---------------------------  179 (550)
T KOG0605|consen  141 DDFELLKVIGKGAFGEVRLARKKDT-------GEIYAMKILKKS-------EM---------------------------  179 (550)
T ss_pred             ccchhheeeccccceeEEEEEEccC-------CcEEeeecccHH-------HH---------------------------
Confidence            4566 68999999999999999987       799999986532       11                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCC--cEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP--AVLVETYEQGECVSRYVDELQGH--ERLKSALAHI  439 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~--~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~  439 (581)
                               .=++|.+|+..=++.+.....-.+.+.|+.+..+  -+|||||++|+.+..++......  ...+.-+|+.
T Consensus       180 ---------~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~  250 (550)
T KOG0605|consen  180 ---------LKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAET  250 (550)
T ss_pred             ---------HhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHH
Confidence                     1111222222222222222222344555555443  36999999999999887543211  1222345554


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH--------------
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE--------------  505 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~--------------  505 (581)
                      .+  .+..||.+|+|||||||.|+||+       ..|      +|+|.|||+++-+....+..+.+              
T Consensus       251 vl--AI~~iH~~gyIHRDIKPdNlLiD-------~~G------HiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~  315 (550)
T KOG0605|consen  251 VL--AIESIHQLGYIHRDIKPDNLLID-------AKG------HIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKP  315 (550)
T ss_pred             HH--HHHHHHHcCcccccCChhheeec-------CCC------CEeeccccccchhhhhhhhhhhcchhhhhhhhccCCC
Confidence            42  37889999999999999999999       888      99999999998765544433211              


Q ss_pred             ----------------------------HHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          506 ----------------------------FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       506 ----------------------------l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                                                  +..+.+-.--|-|+|.++.-+... .-|-|++++.|.|++.|+
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~-~cDwWSLG~ImyEmLvGy  385 (550)
T KOG0605|consen  316 SDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGK-ECDWWSLGCIMYEMLVGY  385 (550)
T ss_pred             ccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCc-cccHHHHHHHHHHHHhCC
Confidence                                        011111111245667777766444 459999999999998774

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=1.5e-18  Score=184.10  Aligned_cols=204  Identities=16%  Similarity=0.118  Sum_probs=134.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +-+|.|+||.||+|+.+.+       |+.||||-.+....                          .++|.+.      .
T Consensus        16 ~klGDGTfGsV~la~~~~~-------~~~VAIK~MK~Kf~--------------------------s~ee~~n------L   56 (538)
T KOG0661|consen   16 RKLGDGTFGSVYLAKSKET-------GELVAIKKMKKKFY--------------------------SWEECMN------L   56 (538)
T ss_pred             HHhcCCcceeEEEeeecCC-------CceeeHHHHHhhhc--------------------------cHHHHHH------H
Confidence            4589999999999999886       68999995332211                          1111111      1


Q ss_pred             HHHHHHH---HHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHH--H
Q 008021          370 SQVDLAR---EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA--L  444 (581)
Q Consensus       370 ~ElDf~~---Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a--~  444 (581)
                      +|+...+   +..|+..+.+.+.+..            +.-.+||||++ ..|.+++++.. ..-....+-.++.+.  -
T Consensus        57 REvksL~kln~hpniikL~Evi~d~~------------~~L~fVfE~Md-~NLYqLmK~R~-r~fse~~irnim~QilqG  122 (538)
T KOG0661|consen   57 REVKSLRKLNPHPNIIKLKEVIRDND------------RILYFVFEFMD-CNLYQLMKDRN-RLFSESDIRNIMYQILQG  122 (538)
T ss_pred             HHHHHHHhcCCCCcchhhHHHhhccC------------ceEeeeHHhhh-hhHHHHHhhcC-CcCCHHHHHHHHHHHHHH
Confidence            2222211   1224444444444333            22348999996 47888886531 111112232222222  2


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      |..||++||||||+||+||||.       ...      -|+|.|||+++++....-      ++..+...+|+|.|++|+
T Consensus       123 L~hiHk~GfFHRDlKPENiLi~-------~~~------~iKiaDFGLARev~SkpP------YTeYVSTRWYRAPEvLLr  183 (538)
T KOG0661|consen  123 LAHIHKHGFFHRDLKPENILIS-------GND------VIKIADFGLAREVRSKPP------YTEYVSTRWYRAPEVLLR  183 (538)
T ss_pred             HHHHHhcCcccccCChhheEec-------ccc------eeEecccccccccccCCC------cchhhhcccccchHHhhh
Confidence            7889999999999999999998       333      799999999999865432      234467899999999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh--HhhccccHHHHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS--GVLRRVIWSILLSACSNYL  565 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~--~~~~~~~~~~ll~~~~~~l  565 (581)
                      -+.+..++|.|+++|.|.|+..  ..|...+.-+.+..+-.+|
T Consensus       184 s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VL  226 (538)
T KOG0661|consen  184 SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVL  226 (538)
T ss_pred             ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHh
Confidence            9999999999999999999863  3455555545554444444

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=2.4e-18  Score=177.68  Aligned_cols=214  Identities=18%  Similarity=0.099  Sum_probs=141.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+|||.|++|.|..|+.+.+       |+.||||-..--    ++.                           .-.++..
T Consensus        27 ~~~iG~GAyGvVcsA~~~~t-------~~~VAIKKi~~~----F~~---------------------------~~~akRt   68 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDKRT-------GEKVAIKKILNP----FEN---------------------------QIDAKRT   68 (359)
T ss_pred             cccccCcceeeEEEEEEcCC-------CCEeehhhhhhh----hhc---------------------------hHHHHHH
Confidence            58999999999999999986       799999942200    000                           1122334


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhH-HHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLK-SALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~-~~la~~~i~a~l~~  447 (581)
                      .+|+.+.++.+|     +|+-...++..|... +--..-++|+|++ +..|.+.++......... +-+.-+++. .++.
T Consensus        69 lRElklLr~~~H-----eNIi~l~di~~p~~~-~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLr-gLKy  140 (359)
T KOG0660|consen   69 LRELKLLRHLRH-----ENIIGLLDIFRPPSR-DKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILR-GLKY  140 (359)
T ss_pred             HHHHHHHHHhcC-----CCcceEEeecccccc-cccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHH-hcch
Confidence            455554443321     122222334444111 1122336999999 678888876532111111 112222222 2667


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      +|..|++|||+||+|++++       .+.      .++++|||+++.+++.   .--..++..+...+|+++|+++....
T Consensus       141 iHSAnViHRDLKPsNll~n-------~~c------~lKI~DFGLAR~~~~~---~~~~~mTeYVaTRWYRAPElll~~~~  204 (359)
T KOG0660|consen  141 IHSANVIHRDLKPSNLLLN-------ADC------DLKICDFGLARYLDKF---FEDGFMTEYVATRWYRAPELLLNSSE  204 (359)
T ss_pred             hhcccccccccchhheeec-------cCC------CEEeccccceeecccc---CcccchhcceeeeeecCHHHHhcccc
Confidence            8889999999999999999       555      8999999999998765   22345566678899999999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhH--hhccccHHHHHHHHHHH
Q 008021          528 QQNCPNPKAFIEWMRLLPSG--VLRRVIWSILLSACSNY  564 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~--~~~~~~~~~ll~~~~~~  564 (581)
                      +...+|+|+.+|.++|++.+  .|...+.-.++.-+.++
T Consensus       205 Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~  243 (359)
T KOG0660|consen  205 YTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILEL  243 (359)
T ss_pred             ccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHh
Confidence            99999999999999999987  45555544444444444

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.75  E-value=8.9e-19  Score=186.90  Aligned_cols=216  Identities=16%  Similarity=0.098  Sum_probs=147.4

Q ss_pred             CCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecC-----CchhhHHHHHHHHHHHHHHhccccc
Q 008021          277 GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP-----GVGESIRRDFVIINLAAKISSVIPA  351 (581)
Q Consensus       277 G~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P-----~v~~~i~~Dl~il~~la~~~~~~p~  351 (581)
                      +..-.+.|+.++  -||.|.|||||+|+...+       |+.||+|-.+-     +....+.+++.||+.+-+       
T Consensus       112 ~~r~~~~feki~--kIGeGTyg~VYkAr~~~t-------gkivALKKvr~d~~~~~~~~t~~REI~ILr~l~H-------  175 (560)
T KOG0600|consen  112 GPRRADSFEKIE--KIGEGTYGQVYKARDLET-------GKIVALKKVRFDNEKEGFPITAIREIKILRRLDH-------  175 (560)
T ss_pred             cccchHHHHHHH--HhcCcchhheeEeeeccc-------CcEEEEEEeecccCCCcchHHHHHHHHHHHhcCC-------
Confidence            333445566554  599999999999999886       79999996553     323333344444432210       


Q ss_pred             ccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc--
Q 008021          352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--  429 (581)
Q Consensus       352 l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--  429 (581)
                                                 .|+.++.+       +.    .....+.-+||.||++- .|.-++......  
T Consensus       176 ---------------------------pNIikL~e-------iv----t~~~~~siYlVFeYMdh-DL~GLl~~p~vkft  216 (560)
T KOG0600|consen  176 ---------------------------PNIIKLEE-------IV----TSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFT  216 (560)
T ss_pred             ---------------------------Ccccceee-------EE----EecCCceEEEEEecccc-hhhhhhcCCCcccC
Confidence                                       12211111       11    11134455799999975 355544332111  


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA  509 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~A  509 (581)
                      ...-.-+..+++.. ++.+|..||+|||||..|||++       .+|      .++|.|||+++..+.+....+    +.
T Consensus       217 ~~qIKc~mkQLl~G-l~~cH~~gvlHRDIK~SNiLid-------n~G------~LKiaDFGLAr~y~~~~~~~~----T~  278 (560)
T KOG0600|consen  217 EPQIKCYMKQLLEG-LEYCHSRGVLHRDIKGSNILID-------NNG------VLKIADFGLARFYTPSGSAPY----TS  278 (560)
T ss_pred             hHHHHHHHHHHHHH-HHHHhhcCeeeccccccceEEc-------CCC------CEEeccccceeeccCCCCccc----cc
Confidence            11112233333333 7778899999999999999999       788      999999999998887776653    33


Q ss_pred             HHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH--hhccccHHHHHHHHHHHH
Q 008021          510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG--VLRRVIWSILLSACSNYL  565 (581)
Q Consensus       510 l~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~--~~~~~~~~~ll~~~~~~l  565 (581)
                      -+-.-+|++.|++|.-..+...+|.|...|.|.||+.+  +++....-+++.-+++++
T Consensus       279 rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklc  336 (560)
T KOG0600|consen  279 RVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLC  336 (560)
T ss_pred             ceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHh
Confidence            44556789999999999999999999999999999987  677777777888888776

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.74  E-value=5.3e-18  Score=187.04  Aligned_cols=200  Identities=18%  Similarity=0.236  Sum_probs=136.1

Q ss_pred             hccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC----chhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG----VGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       284 F~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~----v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      +..+..+-+|.|++|+||+++++.+       |+.||||+.++.    -.+...+++.+|+.+.                
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnket-------G~~vAvK~~~~~~~~r~~e~~~~EieilkKLn----------------   69 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKET-------GRLVAVKTFNKESSLRPRERWCREIEILKKLN----------------   69 (732)
T ss_pred             cceeehhhhcCCccceeeeeccccc-------ccchhHHhhhhhcccchHHHHHHHHHHHHHcC----------------
Confidence            3344578899999999999999987       799999987653    2233333444443211                


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcchhh-HHHH
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHERL-KSAL  436 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~-~~~l  436 (581)
                                        ..|+.+..         .+|..-.  --+...|||||||.|++|...++.++..... ..++
T Consensus        70 ------------------h~NIVk~f---------~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~  122 (732)
T KOG4250|consen   70 ------------------HPNIVKLF---------DIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEF  122 (732)
T ss_pred             ------------------chhhhhhc---------ccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHH
Confidence                              12333221         1222211  1245679999999999999999765432222 2233


Q ss_pred             HHHH--HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          437 AHIG--THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       437 a~~~--i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      ...+  +.+.+..|+++||+|||||||||++-...     +|    +.--+|+|||.++++++..      .+.+++-..
T Consensus       123 l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge-----dg----q~IyKLtDfG~Arel~d~s------~~~S~vGT~  187 (732)
T KOG4250|consen  123 LDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE-----DG----QSIYKLTDFGAARELDDNS------LFTSLVGTE  187 (732)
T ss_pred             HHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC-----CC----ceEEeeecccccccCCCCC------eeeeecCch
Confidence            3222  23458889999999999999999997322     23    2357899999999999877      455666555


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .|-++++.-+-+.+....|.|+|+..+.+.++|.
T Consensus       188 ~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~  221 (732)
T KOG4250|consen  188 EYLHPELYERQKKYTATVDLWSFGVTLYECATGE  221 (732)
T ss_pred             hhcChHHHhhccCcCceeehhhhhhHHHHHhccC
Confidence            6666666654466777889999999999999884

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.74  E-value=2.6e-18  Score=175.68  Aligned_cols=208  Identities=14%  Similarity=0.088  Sum_probs=143.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -.-|++|++|.||||+++.|       ++.||+|-.+++-+.                +-+|               -.-
T Consensus        81 lnrI~EGtyGiVYRakdk~t-------~eIVALKr~kmekek----------------~GFP---------------Its  122 (419)
T KOG0663|consen   81 LNRIEEGTYGVVYRAKDKKT-------DEIVALKRLKMEKEK----------------EGFP---------------ITS  122 (419)
T ss_pred             HhhcccCcceeEEEeccCCc-------ceeEEeeeccccccc----------------CCCc---------------chh
Confidence            46799999999999999987       799999987776321                0122               112


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCC-cccccccccCC-CCcEEEEeccCCccHHHHHHhhhcch--hhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPLV-HPAVLVETYEQGECVSRYVDELQGHE--RLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~-V~vP~~~~~l~-t~~VLVmEyi~G~~L~~~l~~~~~~~--~~~~~la~~~i~a~  444 (581)
                      .+|++...      +++     +++ |.+-+++..-. ..-++||||++- .|..+++.....-  ...+.+.-++++. 
T Consensus       123 LREIniLl------~~~-----H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~g-  189 (419)
T KOG0663|consen  123 LREINILL------KAR-----HPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRG-  189 (419)
T ss_pred             HHHHHHHH------hcC-----CCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHH-
Confidence            23333322      221     222 22223332221 234699999975 5666666543111  1112233333333 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ++.||.+.++||||||.|+|+.       ++|      .+++.|||+++.....     .+-++.++-.-+|++.|+++.
T Consensus       190 lk~lH~~wilHRDLK~SNLLm~-------~~G------~lKiaDFGLAR~ygsp-----~k~~T~lVVTLWYRaPELLLG  251 (419)
T KOG0663|consen  190 LKHLHDNWILHRDLKTSNLLLS-------HKG------ILKIADFGLAREYGSP-----LKPYTPLVVTLWYRAPELLLG  251 (419)
T ss_pred             HHHHhhceeEecccchhheeec-------cCC------cEEecccchhhhhcCC-----cccCcceEEEeeecCHHHhcC
Confidence            8889999999999999999999       788      9999999999988765     222344556678899999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH--hhccccHHHHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG--VLRRVIWSILLSACSNYL  565 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~--~~~~~~~~~ll~~~~~~l  565 (581)
                      .-.+...+|+|++.|.+.+++.+  .+.....-++++.+++++
T Consensus       252 ~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~ll  294 (419)
T KOG0663|consen  252 AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLL  294 (419)
T ss_pred             CcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHh
Confidence            88899999999999999999877  566666667777777766

>smart00090 RIO RIO-like kinase

Probab=99.73  E-value=1.2e-16  Score=161.21  Aligned_cols=187  Identities=22%  Similarity=0.199  Sum_probs=123.5

Q ss_pred             ceeecccceeEEEEEE-eccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccc--cccChhHHHHHHH
Q 008021          289 EAPVASGSIAQVHRAS-LRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAV--KWLRLDESVQQFA  365 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~-l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l--~~l~l~e~v~ef~  365 (581)
                      .++||+|++|+||+|+ ...+       |++||||+.+++.......+.        .....+.+  ...+..+.     
T Consensus        33 ~~~Lg~G~~g~Vy~a~~~~~~-------g~~vaiK~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-----   92 (237)
T smart00090       33 GGCISTGKEANVYHALDFDGS-------GKERAVKIYRTGTLEFKRRDR--------YVDGDFRFKYRKINPRKL-----   92 (237)
T ss_pred             CCeeccCcceeEEEEEecCCC-------CcEEEEEEEEcCcceecchhh--------hcccchhhccCCCCHHHH-----
Confidence            3689999999999998 4332       699999999886432111100        00000000  00111111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHH-hhhcchhhHHHHHHHHHHHH
Q 008021          366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       366 ~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~-~~~~~~~~~~~la~~~i~a~  444 (581)
                          .+..+.+|++++.++...     .+.+|+++..  ...+|||||++|.++..+.. ...........++..++. .
T Consensus        93 ----~~~~~~~E~~~L~~L~~~-----~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~-~  160 (237)
T smart00090       93 ----VRLWAEKEFRNLQRLYEA-----GVPVPKPIAW--RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILE-E  160 (237)
T ss_pred             ----HHHHHHHHHHHHHHHHhc-----CCCCCeeeEe--cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHH-H
Confidence                123457799999888642     5667887742  45799999999988876532 111111111345555444 4


Q ss_pred             HHHhhhCC-eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          445 LKMLLVDN-FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G-~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                      ++++|..| ++|+|+||+||+++        ++      +++|+|||++...++..+.       +++.+|...+...+.
T Consensus       161 l~~LH~~g~iiH~Dikp~NIli~--------~~------~i~LiDFg~a~~~~~~~~~-------~~~~~d~~~~~~~~~  219 (237)
T smart00090      161 MRKLYKEGELVHGDLSEYNILVH--------DG------KVVIIDVSQSVELDHPMAL-------EFLERDIRNIIRFFR  219 (237)
T ss_pred             HHHHHhcCCEEeCCCChhhEEEE--------CC------CEEEEEChhhhccCCcchH-------HHHHHHHHHHHHHHH
Confidence            88899999 99999999999997        23      7999999999987776543       558999999999998


Q ss_pred             hhcCC
Q 008021          524 RLSKQ  528 (581)
Q Consensus       524 ~l~~~  528 (581)
                      +.+..
T Consensus       220 ~~~~~  224 (237)
T smart00090      220 RKGVD  224 (237)
T ss_pred             HcCCC
Confidence            88653

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.72  E-value=4.8e-18  Score=175.76  Aligned_cols=210  Identities=20%  Similarity=0.133  Sum_probs=144.6

Q ss_pred             CceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       288 d~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      +.+-+|+||||.||+|.+..+       +++||||-..|+-+ .-.+++.+|+.+-     +|                 
T Consensus        28 ~~~liG~GsFg~Vyq~~~~e~-------~~~vAIKKv~~d~r-~knrEl~im~~l~-----Hp-----------------   77 (364)
T KOG0658|consen   28 AVRLIGSGSFGVVYQAKLRET-------EEEVAIKKVLQDKR-YKNRELQIMRKLD-----HP-----------------   77 (364)
T ss_pred             eeEEEeecccceEEEEEEcCC-------CceeEEEEecCCCC-cCcHHHHHHHhcC-----Cc-----------------
Confidence            367899999999999999875       68999998777633 2334444444110     11                 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhh----hcchhhHHH-HHHHHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL----QGHERLKSA-LAHIGTH  442 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~----~~~~~~~~~-la~~~i~  442 (581)
                                  |+.++...|.....-  -++|      .-|||||++ .+|.++++..    .......-+ ..-++.+
T Consensus        78 ------------NIV~L~~~f~~~~~~--d~~~------lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfr  136 (364)
T KOG0658|consen   78 ------------NIVRLLYFFSSSTES--DEVY------LNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFR  136 (364)
T ss_pred             ------------CeeeEEEEEEecCCC--chhH------HHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHH
Confidence                        222222222110000  0011      127999995 5777776531    111111111 2223333


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      . +..||..|++|||+||.||||+   +   .+|      .++|+|||.++.+.+.+...      +-....+|+++|++
T Consensus       137 g-l~yLh~~~IcHRDIKPqNlLvD---~---~tg------~LKicDFGSAK~L~~~epni------SYicSRyYRaPELi  197 (364)
T KOG0658|consen  137 G-LAYLHSHGICHRDIKPQNLLVD---P---DTG------VLKICDFGSAKVLVKGEPNI------SYICSRYYRAPELI  197 (364)
T ss_pred             H-HHHHHhcCcccCCCChheEEEc---C---CCC------eEEeccCCcceeeccCCCce------eEEEeccccCHHHH
Confidence            3 7778999999999999999999   2   456      99999999999987766542      23467899999999


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH--hhccccHHHHHHHHHHHHHH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG--VLRRVIWSILLSACSNYLRK  567 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~--~~~~~~~~~ll~~~~~~lr~  567 (581)
                      +....+...+|.|+-+|.|.||+.+  .|......+++..+.+++..
T Consensus       198 fga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~  244 (364)
T KOG0658|consen  198 FGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGT  244 (364)
T ss_pred             cCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999999988  58888888888888888743

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.71  E-value=9.5e-18  Score=173.21  Aligned_cols=210  Identities=17%  Similarity=0.143  Sum_probs=135.2

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      -||+|++|.||+|+.+.+       |+.||+|.++-.-++                +-.|               ....+
T Consensus        18 klGeGtyg~Vykar~~~~-------g~~VALKkirl~~~~----------------EG~P---------------~taiR   59 (323)
T KOG0594|consen   18 KLGEGTYGVVYKARSKRT-------GKFVALKKIRLEFEE----------------EGVP---------------STAIR   59 (323)
T ss_pred             HhCCCCceEEEEEEEecC-------CCEEEEEEEeccccc----------------cCCC---------------chhhH
Confidence            399999999999999986       799999987644211                0011               12234


Q ss_pred             HHHHHHHHHH---HHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHHH
Q 008021          371 QVDLAREAAH---LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGTH  442 (581)
Q Consensus       371 ElDf~~Ea~n---l~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i~  442 (581)
                      |+.+.++.++   +.++.+.+.....       ....+.-.||+||++ .+|.++++....     ....-+.+..+++.
T Consensus        60 Eisllk~L~~~~~iv~L~dv~~~~~~-------~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~  131 (323)
T KOG0594|consen   60 EISLLKRLSHANHIVRLHDVIHTSNN-------HRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLR  131 (323)
T ss_pred             HHHHHHHhCCCcceEEEEeeeeeccc-------ccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHH
Confidence            4444444322   1111111111100       001123458999996 478888876442     11122334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      . +..+|.+|++|||+||.||||+       ++|      .++|+|||+++...-..+. +   ..-++. =+++++|.+
T Consensus       132 g-l~~~H~~~IlHRDLKPQNlLi~-------~~G------~lKlaDFGlAra~~ip~~~-y---t~evvT-lWYRaPEvL  192 (323)
T KOG0594|consen  132 G-LAFLHSHGILHRDLKPQNLLIS-------SSG------VLKLADFGLARAFSIPMRT-Y---TPEVVT-LWYRAPEVL  192 (323)
T ss_pred             H-HHHHHhCCeecccCCcceEEEC-------CCC------cEeeeccchHHHhcCCccc-c---cccEEE-eeccCHHHh
Confidence            3 7778999999999999999999       778      9999999999866533222 1   111112 236999999


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH--hhccccHHHHHHHHHHHH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG--VLRRVIWSILLSACSNYL  565 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~--~~~~~~~~~ll~~~~~~l  565 (581)
                      +.-..+...+|.|.++|.+.|++.+  .|......+++..+++++
T Consensus       193 lGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~l  237 (323)
T KOG0594|consen  193 LGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLL  237 (323)
T ss_pred             cCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHc
Confidence            9877788999999999999999987  365666666666666655

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.71  E-value=1.7e-17  Score=172.07  Aligned_cols=186  Identities=17%  Similarity=0.179  Sum_probs=125.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ...||+|+-|.||++.++.|       ++.+|+|+.+-++..                                ++.+.+
T Consensus        84 ~~~lG~G~gG~V~kv~Hk~t-------~~i~AlK~I~~~~~~--------------------------------~~~~Qi  124 (364)
T KOG0581|consen   84 LGVLGSGNGGTVYKVRHKPT-------GKIYALKVILLNIDP--------------------------------ALQKQI  124 (364)
T ss_pred             hhhcccCCCcEEEEEEEcCC-------CeEEEEEeecccCCH--------------------------------HHHHHH
Confidence            46799999999999999986       799999998544322                                223445


Q ss_pred             HHHHHHHHHHH--HHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAA--HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~--nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                      .+|++..+++.  ++..|...|.....            .-.++|||++|++|+++...... ....-..++...++. |
T Consensus       125 ~rEl~il~~~~spyIV~~ygaF~~~~~------------~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~G-L  191 (364)
T KOG0581|consen  125 LRELEILRSCQSPYIVGFYGAFYSNGE------------EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRG-L  191 (364)
T ss_pred             HHHHHHHhhCCCCCeeeEeEEEEeCCc------------eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHH-H
Confidence            56666655542  33333333322221            12489999999999998864211 122224455555554 7


Q ss_pred             HHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..||+ +++||||+||.||||.       ..|      +|+|+|||.++.+.......|..       .-.|-++|-+-.
T Consensus       192 ~YLh~~~~IIHRDIKPsNlLvN-------skG------eVKicDFGVS~~lvnS~a~tfvG-------T~~YMsPERi~g  251 (364)
T KOG0581|consen  192 SYLHEERKIIHRDIKPSNLLVN-------SKG------EVKICDFGVSGILVNSIANTFVG-------TSAYMSPERISG  251 (364)
T ss_pred             HHHhhccCeeeccCCHHHeeec-------cCC------CEEeccccccHHhhhhhcccccc-------cccccChhhhcC
Confidence            78885 9999999999999999       778      99999999999987774444432       223334444322


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       ..+...-|.|.|+-.|-|+..+
T Consensus       252 -~~Ys~~sDIWSLGLsllE~a~G  273 (364)
T KOG0581|consen  252 -ESYSVKSDIWSLGLSLLELAIG  273 (364)
T ss_pred             -CcCCcccceecccHHHHHHhhC
Confidence             3344456788888777777766

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.71  E-value=2.1e-16  Score=153.90  Aligned_cols=170  Identities=18%  Similarity=0.137  Sum_probs=112.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhh--HHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGES--IRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~--i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      .++||+|++|+||+|...+        |+.||||+.+++....  ...+-..+          +.   ....+..     
T Consensus        20 ~~~i~~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~~~----------~~---~~~~~~~-----   73 (198)
T cd05144          20 GNQIGVGKESDVYLALDPD--------GNPVALKFHRLGRTSFRKVKRKRDYL----------GD---RKHASWL-----   73 (198)
T ss_pred             CCccccCcceEEEEEEcCC--------CCEEEEEEEecccchhhhhcchHHHH----------hc---cccchhH-----
Confidence            4789999999999998853        6999999988753111  00000000          00   0000001     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                       -..+.++..|...+..+...     ++.+|.++.  ....++||||++|.++.+....     .....++..++.. +.
T Consensus        74 -~~~~~~~~~E~~~l~~l~~~-----~i~v~~~~~--~~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~-l~  139 (198)
T cd05144          74 -YLSRLAAQKEFAALKALYEE-----GFPVPKPID--WNRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEE-IV  139 (198)
T ss_pred             -HHhHHHHHHHHHHHHHHHHc-----CCCCCceee--cCCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHH-HH
Confidence             11223455666666665432     356677664  3566999999999999876431     1123455555544 57


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHH----HHHHHHHH
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNL----VEFFKAVA  511 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l----~~l~~Al~  511 (581)
                      .+|..|++|+|+||+||+++       .++      +++|+|||++..++.+.+..+    .+.+.++.
T Consensus       140 ~lh~~gi~H~Dl~p~Nill~-------~~~------~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~  195 (198)
T cd05144         140 KAYKHGIIHGDLSEFNILVD-------DDE------KIYIIDWPQMVSTDHPNAEELLDRDVENILRFF  195 (198)
T ss_pred             HHHHCCCCcCCCCcccEEEc-------CCC------cEEEEECCccccCCCccHHHHHHHHHHHHHHHH
Confidence            78999999999999999998       666      899999999999999888886    44444443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.67  E-value=1e-15  Score=146.72  Aligned_cols=166  Identities=21%  Similarity=0.173  Sum_probs=104.7

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      ++||+|++|+||+|++..        |++||||+.+|+.......+..++..      ........++....        
T Consensus         3 ~~lg~G~~g~Vy~a~~~~--------~~~vavKv~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--------   60 (187)
T cd05119           3 GPIGTGKEADVYLALDGD--------GEPVAVKIYRTGRTSFKKRKRYRTGD------YRFGRKKSNWRYLS--------   60 (187)
T ss_pred             cccccccceeEEEEECCC--------CCEEEEEEEecCccchhhhhhhhHHH------HHhccCCcchhhhh--------
Confidence            579999999999999863        68999999998754432222211100      00000111111111        


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCC-----ccHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG-----ECVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G-----~~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                       +.....|.+++.++...     .+.+|+++.  +...+|||||++|     ..+.+....     .....++..++.+ 
T Consensus        61 -~~~~~~e~~~l~~l~~~-----~~~~~~~~~--~~~~~lv~e~~~g~~~~~~~l~~~~~~-----~~~~~~~~~~~~~-  126 (187)
T cd05119          61 -RLWAEKEFRNLKRLYEA-----GVPVPKPID--LNRHVLVMEFIGGDGIPAPRLKDVRLL-----EDPEELYDQILEL-  126 (187)
T ss_pred             -hHHHHHHHHHHHHHHHc-----CCCCCceEe--cCCCEEEEEEeCCCCccChhhhhhhhc-----ccHHHHHHHHHHH-
Confidence             11223455566655432     356777763  4567999999999     444443211     1223455554444 


Q ss_pred             HHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH
Q 008021          445 LKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE  505 (581)
Q Consensus       445 l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~  505 (581)
                      +..+|. .|++|+|+||+||+++        ++      .++++|||++.....+....+.+
T Consensus       127 l~~lh~~~~ivH~Dl~p~Nili~--------~~------~~~liDfg~a~~~~~~~~~~~~~  174 (187)
T cd05119         127 MRKLYREAGLVHGDLSEYNILVD--------DG------KVYIIDVPQAVEIDHPNAEEFLR  174 (187)
T ss_pred             HHHHhhccCcCcCCCChhhEEEE--------CC------cEEEEECcccccccCcchHHHHH
Confidence            677888 9999999999999998        23      79999999999888877666553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.67  E-value=9.8e-16  Score=153.44  Aligned_cols=145  Identities=13%  Similarity=0.117  Sum_probs=100.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+++|.|.+|+||.+.. .        +..+|||+.+|.....                              +.+....
T Consensus        36 ~~~l~~~~f~~v~l~~~-~--------~~~~iiKvf~~~~~~~------------------------------~~~~~~f   76 (232)
T PRK10359         36 IKVFRNIDDTKVSLIDT-D--------YGKYILKVFAPKVKRT------------------------------ERFLKSF   76 (232)
T ss_pred             EEEecCCCceEEEEEec-C--------CCcEEEEEechhcCch------------------------------HHHHHhh
Confidence            57899999999998654 2        4689999999874321                              0111111


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--------cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--------PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--------~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~  440 (581)
                      ...=-|++|++++.++.+     +++..|..+.        .+++..+|||||++|.+|.++...   .    ...... 
T Consensus        77 ~~g~~~e~Ea~~l~rL~~-----~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~---~----~~~~~~-  143 (232)
T PRK10359         77 VKGDYYENLIVQTDRVRS-----EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI---S----EDVKAK-  143 (232)
T ss_pred             hhhHHHHHHHHHHHHHHH-----CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc---c----HHHHHH-
Confidence            112235788888988853     3455555441        135678999999999999987421   1    122222 


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD  499 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~  499 (581)
                      +...+.++|..|++|||||||||+++       ++|       ++|+|||.+.....+.
T Consensus       144 i~~~l~~lH~~gi~H~Dikp~Nili~-------~~g-------i~liDfg~~~~~~e~~  188 (232)
T PRK10359        144 IKASIESLHQHGMVSGDPHKGNFIVS-------KNG-------LRIIDLSGKRCTAQRK  188 (232)
T ss_pred             HHHHHHHHHHcCCccCCCChHHEEEe-------CCC-------EEEEECCCcccccchh
Confidence            23458999999999999999999998       443       9999999998775433

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.66  E-value=2.8e-16  Score=169.13  Aligned_cols=194  Identities=19%  Similarity=0.193  Sum_probs=124.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||.||+.+|++|+.+.+       ++++||||.-...         |++                      +     
T Consensus        78 g~~lGeGSYStV~~A~~~~t-------~keYAiKVl~K~~---------Iik----------------------e-----  114 (604)
T KOG0592|consen   78 GKILGEGSYSTVVLAREKAT-------GKEYAIKVLDKRY---------IIK----------------------E-----  114 (604)
T ss_pred             hheeccccceeEEEeeecCC-------CceeeHhhhhHHH---------HHh----------------------h-----
Confidence            57899999999999999986       7999999843210         000                      0     


Q ss_pred             HHHHHH-HHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhcchh-hHHHHHHHHHHHH
Q 008021          369 MSQVDL-AREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQGHER-LKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf-~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~~~~-~~~~la~~~i~a~  444 (581)
                       .-++| .+|-..+.++.    +++++.  +.|..+.  ..-+.|+||++++.|-+++...+.-.. ..+-.|..++++ 
T Consensus       115 -~KvkYV~~Ek~~l~~L~----~hPgiv--kLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldA-  186 (604)
T KOG0592|consen  115 -KKVKYVTREKEALTQLS----GHPGIV--KLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDA-  186 (604)
T ss_pred             -cccchhhHHHHHHHHhh----CCCCeE--EEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHH-
Confidence             00111 12322333332    333322  3333332  344789999999999999875432211 122334444554 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHH--HHHH------HHHHhhcHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNL--VEFF------KAVARRDGR  516 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l--~~l~------~Al~~~D~~  516 (581)
                      ++.||.+|||||||||+|||++       .+|      +++|.|||.++.+++.....=  ..--      ...+ +..+
T Consensus       187 leylH~~GIIHRDlKPENILLd-------~dm------hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFV-GTAe  252 (604)
T KOG0592|consen  187 LEYLHSNGIIHRDLKPENILLD-------KDG------HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFV-GTAE  252 (604)
T ss_pred             HHHHHhcCceeccCChhheeEc-------CCC------cEEEeeccccccCChhhccccCccCcccccCccccee-eeec
Confidence            8999999999999999999999       888      999999999999988654410  0000      0001 1112


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      -+.-.+|.-+......|.|+|+|.|.+++.|
T Consensus       253 YVSPElL~~~~~~~~sDiWAlGCilyQmlaG  283 (604)
T KOG0592|consen  253 YVSPELLNDSPAGPSSDLWALGCILYQMLAG  283 (604)
T ss_pred             ccCHHHhcCCCCCcccchHHHHHHHHHHhcC
Confidence            2333344446666677999999999999977

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.65  E-value=4.2e-16  Score=165.25  Aligned_cols=194  Identities=16%  Similarity=0.132  Sum_probs=120.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+       |+.||||+.+....  ..                            .+...  
T Consensus         6 ~~~LG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~--~~----------------------------~~~~~--   46 (363)
T cd05628           6 LKVIGRGAFGEVRLVQKKDT-------GHVYAMKILRKADM--LE----------------------------KEQVG--   46 (363)
T ss_pred             eEEEEeCCCEEEEEEEECCC-------CCEEEEEEEEHHHH--HH----------------------------hhHHH--
Confidence            57899999999999999865       69999998653200  00                            00001  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                          .+..|...+.++     +++  .+++.+..+  ....+|||||++|++|.+++..... .......++..++. .+
T Consensus        47 ----~~~~E~~il~~~-----~~~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~-aL  114 (363)
T cd05628          47 ----HIRAERDILVEA-----DSL--WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVL-AI  114 (363)
T ss_pred             ----HHHHHHHHHHhC-----CCC--CcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHH-HH
Confidence                122333333222     112  233333222  2345799999999999998854221 11112233334443 37


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHH-------------------
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF-------------------  506 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l-------------------  506 (581)
                      ..||..|++|||+||.|||++       .+|      .++|+|||+++.+....+..+...                   
T Consensus       115 ~~lH~~givHrDlKp~NILi~-------~~~------~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (363)
T cd05628         115 DSIHQLGFIHRDIKPDNLLLD-------SKG------HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRK  181 (363)
T ss_pred             HHHHhCCeEecCCCHHHeEEC-------CCC------CEEEeeccCcccccccccccccccccccccccccccccccccc
Confidence            889999999999999999998       667      899999999987654322211100                   


Q ss_pred             ---H--------HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          507 ---F--------KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       507 ---~--------~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                         +        ....-.-.+.+.|.+.. .......|.|+|+..+.+++.+
T Consensus       182 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G  232 (363)
T cd05628         182 AETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIG  232 (363)
T ss_pred             cchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhC
Confidence               0        01111224567777654 3344567999999999999877

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=2.3e-16  Score=171.95  Aligned_cols=180  Identities=20%  Similarity=0.172  Sum_probs=130.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecC------CchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP------GVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P------~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      .+-||.|+||+||+|+...+       |+.||+||...      +.++                                
T Consensus        23 g~~LGkGgFA~cYe~~~~~t-------ge~~A~KvVpk~~l~k~~~re--------------------------------   63 (592)
T KOG0575|consen   23 GRFLGKGGFARCYEARDLDT-------GEVVAVKVVPKKLLKKPKQRE--------------------------------   63 (592)
T ss_pred             eeeeccCcceEEEEEEEcCC-------CcEEEEEEeehHHhcCcchHH--------------------------------
Confidence            57899999999999999776       79999999642      2222                                


Q ss_pred             HHHHHHHHHHHHHHHH--HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHH
Q 008021          363 QFAVFMMSQVDLAREA--AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHI  439 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea--~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~  439 (581)
                          .+.+|+...+..  .|+.+|...|++..+|+             ||.|.|+-.+|.++.+.... .+.....+..+
T Consensus        64 ----Kv~~EIeIHr~L~HpnIV~f~~~FEDs~nVY-------------ivLELC~~~sL~el~Krrk~ltEpEary~l~Q  126 (592)
T KOG0575|consen   64 ----KVLNEIEIHRSLKHPNIVQFYHFFEDSNNVY-------------IVLELCHRGSLMELLKRRKPLTEPEARYFLRQ  126 (592)
T ss_pred             ----HHHHHHHHHHhcCCCcEEeeeeEeecCCceE-------------EEEEecCCccHHHHHHhcCCCCcHHHHHHHHH
Confidence                334444444443  36777878888877776             89999999999999864221 11222334444


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh-hH-HHHHHHHHHHHhhcH-H
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT-DR-VNLVEFFKAVARRDG-R  516 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~-~r-~~l~~l~~Al~~~D~-~  516 (581)
                      ++.. ++.||.+||+|||||-|||+++       ++-      +|+|.|||+++.+..+ +| ..+|        +.. |
T Consensus       127 Iv~G-lkYLH~~~IiHRDLKLGNlfL~-------~~~------~VKIgDFGLAt~le~~~Erk~TlC--------GTPNY  184 (592)
T KOG0575|consen  127 IVEG-LKYLHSLGIIHRDLKLGNLFLN-------ENM------NVKIGDFGLATQLEYDGERKKTLC--------GTPNY  184 (592)
T ss_pred             HHHH-HHHHHhcCceecccchhheeec-------CcC------cEEecccceeeeecCcccccceec--------CCCcc
Confidence            4433 8889999999999999999999       555      8999999999998744 33 3444        333 3


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      -++|.+.+ ....-..|.|+.++.|..|+.+
T Consensus       185 IAPEVl~k-~gHsfEvDiWSlGcvmYtLL~G  214 (592)
T KOG0575|consen  185 IAPEVLNK-SGHSFEVDIWSLGCVMYTLLVG  214 (592)
T ss_pred             cChhHhcc-CCCCCchhhhhhhhHHHhhhhC
Confidence            45566553 3344468999999999999876

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.65  E-value=1e-14  Score=142.47  Aligned_cols=144  Identities=19%  Similarity=0.220  Sum_probs=102.9

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      ++||+|++|.||+|...         |..|+||+..|.....-..|                          .     ..
T Consensus         2 ~~l~~G~~~~vy~~~~~---------~~~~~vK~~~~~~~~~~~~~--------------------------~-----~~   41 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFL---------GIKAVIKWRIPKRYRHPELD--------------------------E-----RI   41 (211)
T ss_pred             cccccCceEEEEEEeeC---------CCceEEEEeCCcCCcChHHH--------------------------H-----HH
Confidence            57899999999999872         57899999776532111101                          0     01


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL  449 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~  449 (581)
                      ....+.+|++++.++..     .++.+|.++.......+++|||++|.+|.+++.....   ....++..+.. .+.++|
T Consensus        42 ~~~~~~~E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~---~~~~i~~~i~~-~l~~lH  112 (211)
T PRK14879         42 RRERTRREARIMSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM---EELELSREIGR-LVGKLH  112 (211)
T ss_pred             HHHHHHHHHHHHHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH---HHHHHHHHHHH-HHHHHH
Confidence            22345667777766542     3577888876666778999999999999998754221   23345544443 478899


Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      ..|++|+|+||+|||++       . +      .++++|||++...+
T Consensus       113 ~~~i~H~Dl~p~Nil~~-------~-~------~~~liDf~~a~~~~  145 (211)
T PRK14879        113 SAGIIHGDLTTSNMILS-------G-G------KIYLIDFGLAEFSK  145 (211)
T ss_pred             hCCcccCCCCcccEEEE-------C-C------CEEEEECCcccCCC
Confidence            99999999999999997       2 3      79999999988644

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=1.1e-15  Score=163.49  Aligned_cols=194  Identities=19%  Similarity=0.175  Sum_probs=128.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.|+.|....+       |+.||||+......                    +... ..+.+       .+
T Consensus        22 ~~~lG~GsfgkV~~a~~~~t-------~~~vAiKii~~~~~--------------------~~~~-~~~~~-------~i   66 (370)
T KOG0583|consen   22 GRTLGSGSFGKVKLAKHRLT-------GEKVAIKIIDRKKV--------------------SSKS-QKLDE-------LI   66 (370)
T ss_pred             eeeecCCCCeeEEEeeeccC-------CCeEEEEEechhcc--------------------cccc-cccch-------hh
Confidence            58899999999999999876       79999997544300                    0000 01111       11


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                      .      +|..++.++.    .++++.--..+....+.-++||||+.|+.|.+++..... .+.....+-.+++.+ +.+
T Consensus        67 ~------rEi~~~~~~~----~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisa-v~y  135 (370)
T KOG0583|consen   67 K------REISILRRLR----SHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISA-VAY  135 (370)
T ss_pred             H------HHHHHHHHhc----cCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHH-HHH
Confidence            1      3334444443    223333222223334456899999999999999876221 111223344444444 888


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccc-cccCCCCeEEEEecccccccC-H-hhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQK-RLFRSKPHVIFLDVGMTAELS-K-TDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~-g~~~~~~~lvLiDFGl~~~L~-~-~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +|..|++||||||+|||++       .+ +      .++|+|||++.... + +.-..+|       -...|.+.|++..
T Consensus       136 ~H~~gi~HRDLK~ENilld-------~~~~------~~Kl~DFG~s~~~~~~~~~l~t~c-------Gsp~Y~aPEvl~~  195 (370)
T KOG0583|consen  136 CHSRGIVHRDLKPENILLD-------GNEG------NLKLSDFGLSAISPGEDGLLKTFC-------GSPAYAAPEVLSG  195 (370)
T ss_pred             HHhCCEeeCCCCHHHEEec-------CCCC------CEEEeccccccccCCCCCcccCCC-------CCcccCCHHHhCC
Confidence            9999999999999999999       44 6      89999999999873 2 2222222       3446788888877


Q ss_pred             hc-CCCCCCCHHHHHHHHHHhhhHh
Q 008021          525 LS-KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       525 l~-~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .. ......|.|+++-.|..++.+.
T Consensus       196 ~~~Y~g~~aDvWS~GViLy~ml~G~  220 (370)
T KOG0583|consen  196 KGTYSGKAADVWSLGVILYVLLCGR  220 (370)
T ss_pred             CCCcCCchhhhhhhHHHHHHHHhCC
Confidence            67 5567889999999999998884

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.64  E-value=1.9e-15  Score=158.41  Aligned_cols=207  Identities=18%  Similarity=0.137  Sum_probs=126.9

Q ss_pred             HHHhCCChhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccc
Q 008021          273 ERAFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA  351 (581)
Q Consensus       273 e~elG~~~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~  351 (581)
                      ++++++..-++.+.|. .++||+|++|+||+|....+       ++.||||+..........                  
T Consensus         3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~------------------   57 (343)
T cd07878           3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRL-------RQKVAVKKLSRPFQSLIH------------------   57 (343)
T ss_pred             HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCC-------CCEEEEEEeCchhhhhHH------------------
Confidence            3455554445555555 58999999999999998764       689999987543211000                  


Q ss_pred             ccccChhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc
Q 008021          352 VKWLRLDESVQQFAVFMMSQVDLAREA--AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH  429 (581)
Q Consensus       352 l~~l~l~e~v~ef~~~l~~ElDf~~Ea--~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~  429 (581)
                                   .....+|+......  .|+.++.+.+...       .........+++||++ |.+|.+++......
T Consensus        58 -------------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~l~~~~~~~~l~  116 (343)
T cd07878          58 -------------ARRTYRELRLLKHMKHENVIGLLDVFTPA-------TSIENFNEVYLVTNLM-GADLNNIVKCQKLS  116 (343)
T ss_pred             -------------HHHHHHHHHHHHhcCCCchhhhhhhhccc-------ccccccCcEEEEeecC-CCCHHHHHhcCCCC
Confidence                         00011111111111  1222222222111       1111223457899987 77888876532222


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA  509 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~A  509 (581)
                      ......++..++.+ +..||..|++|+|+||+||+++       .++      .++|+|||++..++.....        
T Consensus       117 ~~~~~~i~~qi~~a-L~~LH~~~ivHrdikp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~--------  174 (343)
T cd07878         117 DEHVQFLIYQLLRG-LKYIHSAGIIHRDLKPSNVAVN-------EDC------ELRILDFGLARQADDEMTG--------  174 (343)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHCCeecccCChhhEEEC-------CCC------CEEEcCCccceecCCCcCC--------
Confidence            22223444444444 7789999999999999999998       667      8999999999876543211        


Q ss_pred             HHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       510 l~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......+.+.|.+..........|.|+++..+.+++.+
T Consensus       175 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  212 (343)
T cd07878         175 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKG  212 (343)
T ss_pred             ccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHC
Confidence            11233456777776544455678999999999999877

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.63  E-value=5.2e-16  Score=165.79  Aligned_cols=194  Identities=16%  Similarity=0.100  Sum_probs=118.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||+|++|+||+|+.+.+       |+.||||+.+..-.  .                            -.+..   
T Consensus         6 ~~~LG~G~~g~Vy~~~~~~~-------~~~~aiK~i~~~~~--~----------------------------~~~~~---   45 (381)
T cd05626           6 IKTLGIGAFGEVCLACKVDT-------HALYAMKTLRKKDV--L----------------------------NRNQV---   45 (381)
T ss_pred             EEEEeecCCEEEEEEEECCC-------CCEEEEEEEEHHHh--h----------------------------hhHHH---
Confidence            46799999999999999875       79999998653200  0                            00000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|...+.++     ++++  +++.+..  .....++||||++|++|.+++...... ......++..++. .+
T Consensus        46 ---~~~~~E~~il~~l-----~h~~--iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~-aL  114 (381)
T cd05626          46 ---AHVKAERDILAEA-----DNEW--VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTL-AI  114 (381)
T ss_pred             ---HHHHHHHHHHHhc-----CCCC--eeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHH-HH
Confidence               1223333333322     1222  2222222  223458999999999999987543211 1111223333333 37


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHH---------------------
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV---------------------  504 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~---------------------  504 (581)
                      ..+|..|++|+|+||.|||++       .+|      +++|+|||++..+.......+.                     
T Consensus       115 ~~LH~~givHrDlKp~Nili~-------~~~------~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (381)
T cd05626         115 ESVHKMGFIHRDIKPDNILID-------LDG------HIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVS  181 (381)
T ss_pred             HHHHhCCeeecCCcHHHEEEC-------CCC------CEEEeeCcCCcccccccccccccccccccccccCccccccccc
Confidence            889999999999999999998       667      8999999997654211100000                     


Q ss_pred             ------------H---------HHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          505 ------------E---------FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       505 ------------~---------l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                                  .         .-..++-...+.+.|.+... ......|.|+|+..+.+++.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DiwSlG~il~elltG  244 (381)
T cd05626         182 NCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK-GYTQLCDWWSVGVILFEMLVG  244 (381)
T ss_pred             ccccccccchhhccccccccccccccccCCccccCHHHHcCC-CCCCccceeehhhHHHHHHhC
Confidence                        0         00011223356777877543 344568999999999999877

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=2.5e-15  Score=157.07  Aligned_cols=186  Identities=17%  Similarity=0.103  Sum_probs=119.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+........                                    .
T Consensus         6 ~~~ig~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~------------------------------------~   42 (333)
T cd05600           6 LTQVGQGGYGQVFLAKKKDT-------GEIVALKRMKKSLLFK------------------------------------L   42 (333)
T ss_pred             EEEEeecCCeEEEEEEECCC-------CCEEEEEEEEHHHHhh------------------------------------h
Confidence            57899999999999999865       6899999865431000                                    0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                      ...-.+.+|...+.++.     +++  +++.+..  .....+|||||++|.+|.+++..... .......++..++.+ +
T Consensus        43 ~~~~~~~~e~~~l~~~~-----h~~--iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~-l  114 (333)
T cd05600          43 NEVRHVLTERDILTTTK-----SEW--LVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEA-V  114 (333)
T ss_pred             hHHHHHHHHHHHHHhCC-----CCC--CccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence            00012233443333221     222  2222222  22345799999999999999864221 111222333344433 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.||+++       .+|      .++|+|||++.......        ........+.++|.+...
T Consensus       115 ~~lH~~~ivH~dlkp~Nil~~-------~~~------~~kL~Dfg~a~~~~~~~--------~~~~gt~~y~aPE~~~~~  173 (333)
T cd05600         115 DALHELGYIHRDLKPENFLID-------ASG------HIKLTDFGLSKGIVTYA--------NSVVGSPDYMAPEVLRGK  173 (333)
T ss_pred             HHHHHCCccccCCCHHHEEEC-------CCC------CEEEEeCcCCccccccc--------CCcccCccccChhHhcCC
Confidence            889999999999999999998       667      89999999988664411        011122345667766443


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       ......|.++|+..+.+++.+
T Consensus       174 -~~~~~~DvwslG~il~ell~g  194 (333)
T cd05600         174 -GYDFTVDYWSLGCMLYEFLCG  194 (333)
T ss_pred             -CCCCccceecchHHHhhhhhC
Confidence             444567999999999998876

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.62  E-value=2.6e-15  Score=155.72  Aligned_cols=190  Identities=21%  Similarity=0.176  Sum_probs=124.0

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      .++|+ -+.||.||||+|+..+.+++       ++..|+||+....                               +++
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt-------~kiYAmKvl~K~~-------------------------------iv~   65 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDT-------GKIYAMKVLKKKK-------------------------------IVE   65 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEccc-------CceeehhhhhhhH-------------------------------hhh
Confidence            45677 68999999999999999987       7999999865420                               000


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhcchh--hHHHHH
Q 008021          363 Q-FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQGHER--LKSALA  437 (581)
Q Consensus       363 e-f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~~~~--~~~~la  437 (581)
                      . -.+.+..      |..-+++..     ++. .+ .-++.+.  .+-+||+||+.|+.|--.++....-..  .+--+|
T Consensus        66 ~~e~~~~~~------Er~IL~~v~-----hPF-iv-~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYla  132 (357)
T KOG0598|consen   66 KKEVRHTKA------ERNILSKIK-----HPF-IV-KLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLA  132 (357)
T ss_pred             hhhHHHHHH------HHHHHHhCC-----CCc-Ee-eeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHH
Confidence            0 0011222      222222211     111 11 2222333  344899999999999887764221111  122344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc-CHhh-HHHHHHHHHHHHhhcH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL-SKTD-RVNLVEFFKAVARRDG  515 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L-~~~~-r~~l~~l~~Al~~~D~  515 (581)
                      ++.  ..+..||..||||||+||+|||++       .+|      +|+|.|||++++- ...+ -..||       -.-.
T Consensus       133 Ei~--lAL~~LH~~gIiyRDlKPENILLd-------~~G------Hi~LtDFgL~k~~~~~~~~t~tfc-------GT~e  190 (357)
T KOG0598|consen  133 EIV--LALGYLHSKGIIYRDLKPENILLD-------EQG------HIKLTDFGLCKEDLKDGDATRTFC-------GTPE  190 (357)
T ss_pred             HHH--HHHHHHHhCCeeeccCCHHHeeec-------CCC------cEEEeccccchhcccCCCcccccc-------CCcc
Confidence            443  358999999999999999999999       888      9999999999843 3222 22333       2234


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |-|+|.+++- .+....|-|+++..+.+++.+
T Consensus       191 YmAPEil~~~-gy~~~vDWWsLGillYeML~G  221 (357)
T KOG0598|consen  191 YMAPEILLGK-GYDKAVDWWSLGILLYEMLTG  221 (357)
T ss_pred             ccChHHHhcC-CCCcccchHhHHHHHHHHhhC
Confidence            5667777664 556788999999999999877

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.62  E-value=1.9e-14  Score=139.44  Aligned_cols=140  Identities=21%  Similarity=0.215  Sum_probs=98.1

Q ss_pred             ecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHH
Q 008021          292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ  371 (581)
Q Consensus       292 IgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~E  371 (581)
                      ||+|++|.||+|...         |.+|+||+..+.....-..|.                               ..+.
T Consensus         2 ig~G~~~~vy~~~~~---------~~~~viK~~~~~~~~~~~~~~-------------------------------~~~~   41 (199)
T TIGR03724         2 IAKGAEAIIYLGDFL---------GLKAVIKERVPKSYRHPELDE-------------------------------RIRR   41 (199)
T ss_pred             CCCCceEEEEEeecC---------CccEEEEEecCCcCcCchHHH-------------------------------HHHH
Confidence            789999999999852         589999986654211100000                               0111


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhC
Q 008021          372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD  451 (581)
Q Consensus       372 lDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~  451 (581)
                      -.+.+|.+++.++..     .++.+|.++.......++||||++|.+|.+++.....      .++..+.. .+..+|..
T Consensus        42 ~~~~~E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~------~~~~~i~~-~l~~lH~~  109 (199)
T TIGR03724        42 ERTRNEARLLSRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND------ELLREIGR-LVGKLHKA  109 (199)
T ss_pred             HHHHHHHHHHHHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH------HHHHHHHH-HHHHHHHC
Confidence            234567777766643     3567888876666677999999999999987644110      34444443 37789999


Q ss_pred             CeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          452 NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       452 G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      |++|+|+||+||+++        ++      +++++|||++...++
T Consensus       110 gi~H~Dl~~~Nil~~--------~~------~~~liDfg~a~~~~~  141 (199)
T TIGR03724       110 GIVHGDLTTSNIIVR--------DD------KLYLIDFGLGKYSDE  141 (199)
T ss_pred             CeecCCCCcceEEEE--------CC------cEEEEECCCCcCCCc
Confidence            999999999999997        23      799999999887544

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.62  E-value=5.6e-15  Score=153.71  Aligned_cols=122  Identities=17%  Similarity=0.120  Sum_probs=83.8

Q ss_pred             CcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ..++||||++|++|.+++...... ......++..++.+ +..||..|++|+|+||.||+++       .+|      .+
T Consensus        70 ~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~a-l~~LH~~~ivH~dlkp~Nill~-------~~~------~~  135 (316)
T cd05592          70 HLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICG-LQFLHKKGIIYRDLKLDNVLLD-------KDG------HI  135 (316)
T ss_pred             EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHCCEEeCCCCHHHeEEC-------CCC------CE
Confidence            457999999999999887543211 11122334444444 7889999999999999999998       667      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++..........     ........+.++|.+.. .......|.|+|+..+.+++.+
T Consensus       136 kL~Dfg~a~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G  192 (316)
T cd05592         136 KIADFGMCKENMNGEGKA-----STFCGTPDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIG  192 (316)
T ss_pred             EEccCcCCeECCCCCCcc-----ccccCCccccCHHHHcC-CCCCCcccchhHHHHHHHHHhC
Confidence            999999987643322110     11122335667776643 3344567999999999999877

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=1.3e-14  Score=148.92  Aligned_cols=186  Identities=16%  Similarity=0.127  Sum_probs=117.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+....-..    +.                                
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~~~----~~--------------------------------   42 (291)
T cd05612           6 IKTVGTGTFGRVHLVRDRIS-------EHYYALKVMAIPEVI----RL--------------------------------   42 (291)
T ss_pred             eeeeecCCCeEEEEEEEcCC-------CCEEEEEEEEHHHHh----hh--------------------------------
Confidence            57899999999999999865       699999986532100    00                                


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                      ...-.+.+|...+.++.     +++  +.+.+..  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        43 ~~~~~~~~E~~~l~~l~-----hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~-l  114 (291)
T cd05612          43 KQEQHVHNEKRVLKEVS-----HPF--IIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCA-L  114 (291)
T ss_pred             HHHHHHHHHHHHHHhCC-----CCc--HhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence            00011223333332221     111  1122211  12334699999999999998864321 111122334444443 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .+|      .++|+|||++..+......        ......+.++|.+.. 
T Consensus       115 ~~lH~~~i~H~dlkp~NIli~-------~~~------~~kl~Dfg~~~~~~~~~~~--------~~gt~~y~aPE~~~~-  172 (291)
T cd05612         115 EYLHSKEIVYRDLKPENILLD-------KEG------HIKLTDFGFAKKLRDRTWT--------LCGTPEYLAPEVIQS-  172 (291)
T ss_pred             HHHHHCCeeecCCCHHHeEEC-------CCC------CEEEEecCcchhccCCccc--------ccCChhhcCHHHHcC-
Confidence            889999999999999999998       667      8999999998876543211        112234566776644 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+|+..+.+++.+
T Consensus       173 ~~~~~~~DiwSlG~il~~l~~g  194 (291)
T cd05612         173 KGHNKAVDWWALGILIYEMLVG  194 (291)
T ss_pred             CCCCchhhHHHHHHHHHHHHhC
Confidence            3344567999999999999876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.61  E-value=4.6e-15  Score=154.84  Aligned_cols=199  Identities=14%  Similarity=0.044  Sum_probs=120.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.....    ..|+.||||+.......   .+.                                
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~----~~~~~~aiK~~~~~~~~---~~~--------------------------------   45 (332)
T cd05614           5 LKVLGTGAYGKVFLVRKVTGH----DTGKLYAMKVLQKAALV---QKA--------------------------------   45 (332)
T ss_pred             EEEEeecCCEEEEEEEEcccC----CCCCEEEEEEEEHHHHh---hhh--------------------------------
Confidence            468999999999999875311    12689999986532100   000                                


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                      ...-.+..|...+.++    .+.+.+.............++||||++|++|.+++..... .......++..++.+ +..
T Consensus        46 ~~~~~~~~e~~~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~-l~~  120 (332)
T cd05614          46 KTVEHTRTERNVLEHV----RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILA-LEH  120 (332)
T ss_pred             hHHHHHHHHHHHHHhc----cCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HHH
Confidence            0001123344333332    2223322111111223345799999999999988754221 111122333344443 788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      ||..|++|+|+||.|||++       .+|      .++|+|||++..+.........    .....-.+.+.|.+.....
T Consensus       121 lH~~~ivHrDlkp~Nili~-------~~~------~~kl~DfG~~~~~~~~~~~~~~----~~~gt~~y~aPE~~~~~~~  183 (332)
T cd05614         121 LHKLGIVYRDIKLENILLD-------SEG------HVVLTDFGLSKEFLSEEKERTY----SFCGTIEYMAPEIIRGKGG  183 (332)
T ss_pred             HHHCCcEecCCCHHHeEEC-------CCC------CEEEeeCcCCccccccCCCccc----cccCCccccCHHHhcCCCC
Confidence            9999999999999999998       667      8999999998765332211100    1112334667777654333


Q ss_pred             CCCCCCHHHHHHHHHHhhhHh
Q 008021          528 QQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .....|.|+|+..+.+++.+.
T Consensus       184 ~~~~~DiwslG~il~elltg~  204 (332)
T cd05614         184 HGKAVDWWSLGILIFELLTGA  204 (332)
T ss_pred             CCCccccccchhhhhhhhcCC
Confidence            445679999999999998773

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.60  E-value=6.5e-15  Score=154.11  Aligned_cols=190  Identities=14%  Similarity=0.121  Sum_probs=122.4

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      .+|+ .+.||+|++|.||+|+.+.+       |+.||||+.+..-       +...                   +    
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~-------~~~~-------------------~----   60 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGT-------GEYYAIKCLKKRE-------ILKM-------------------K----   60 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCC-------CCEEEEEEEEHHH-------Hhhh-------------------h----
Confidence            3444 57899999999999999865       7999999865420       0000                   0    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                            ..-++.+|...+.++.     ++++  ++.+.  ......++||||++|.+|.+++..... .......++..+
T Consensus        61 ------~~~~~~~E~~~l~~l~-----hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi  127 (329)
T PTZ00263         61 ------QVQHVAQEKSILMELS-----HPFI--VNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAEL  127 (329)
T ss_pred             ------hHHHHHHHHHHHHhCC-----CCCC--CcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHH
Confidence                  0012334544444331     2222  22222  223455899999999999988764321 111122233333


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||.|||++       .+|      .++|+|||++..+++....        ......+.++|
T Consensus       128 ~~a-L~~LH~~~ivH~dlkp~NIll~-------~~~------~~kl~Dfg~~~~~~~~~~~--------~~gt~~y~aPE  185 (329)
T PTZ00263        128 VLA-FEYLHSKDIIYRDLKPENLLLD-------NKG------HVKVTDFGFAKKVPDRTFT--------LCGTPEYLAPE  185 (329)
T ss_pred             HHH-HHHHHHCCeeecCCCHHHEEEC-------CCC------CEEEeeccCceEcCCCcce--------ecCChhhcCHH
Confidence            333 7889999999999999999998       677      8999999999877553321        11122456677


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.. .......|.|+|+..+.+++.+
T Consensus       186 ~~~~-~~~~~~~DiwslG~il~elltg  211 (329)
T PTZ00263        186 VIQS-KGHGKAVDWWTMGVLLYEFIAG  211 (329)
T ss_pred             HHcC-CCCCCcceeechHHHHHHHHcC
Confidence            6643 3344567999999999999876

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=2.7e-15  Score=158.54  Aligned_cols=194  Identities=16%  Similarity=0.161  Sum_probs=120.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+...+       |+.||||+....       ++.                     +  .+...  
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~-------~~~vaiK~~~~~-------~~~---------------------~--~~~~~--   46 (364)
T cd05599           6 IKVIGRGAFGEVRLVQKKDT-------GHIYAMKKLRKS-------EML---------------------E--KEQVA--   46 (364)
T ss_pred             EEEEEecCCEEEEEEEECCC-------CCEEEEEEEEHH-------Hhh---------------------h--hhHHH--
Confidence            57899999999999999865       699999986532       000                     0  00001  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                          .+.+|...+..+.     +++  +++.+..+  ....+|||||++|++|.+++..... .......++..++.+ +
T Consensus        47 ----~~~~E~~il~~l~-----h~~--iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~a-L  114 (364)
T cd05599          47 ----HVRAERDILAEAD-----NPW--VVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILA-I  114 (364)
T ss_pred             ----HHHHHHHHHHhCC-----CCC--CcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence                1223333333221     222  22333222  3345799999999999998754221 112222344444443 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHH-------------------
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF-------------------  506 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l-------------------  506 (581)
                      ..||..|++|+|+||+|||++       .+|      .++|+|||++..+...........                   
T Consensus       115 ~~lH~~~ivH~Dlkp~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (364)
T cd05599         115 DSIHKLGYIHRDIKPDNLLLD-------AKG------HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSS  181 (364)
T ss_pred             HHHHHCCeEeccCCHHHeEEC-------CCC------CEEEeecccceeccccccccccccccccccccccccccccccc
Confidence            889999999999999999998       677      899999999876643221111000                   


Q ss_pred             ------H--------HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          507 ------F--------KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       507 ------~--------~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                            +        ...+....+.++|.+.. .......|.|+|++.+.+++.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G  235 (364)
T cd05599         182 KRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVG  235 (364)
T ss_pred             cccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcC
Confidence                  0        00111234667777644 3344567999999999999876

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.60  E-value=1.7e-15  Score=160.38  Aligned_cols=194  Identities=16%  Similarity=0.145  Sum_probs=119.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+.++...  ..                            .+..   
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~--~~----------------------------~~~~---   45 (360)
T cd05627           6 LKVIGRGAFGEVRLVQKKDT-------GHIYAMKILRKADM--LE----------------------------KEQV---   45 (360)
T ss_pred             EEEEeeCCCEEEEEEEECCC-------CCEEEEEEEEHHHH--hh----------------------------hhhH---
Confidence            57899999999999999875       79999998764200  00                            0000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.++.|...+.++     +++  .+++.+..+.  ...+|||||++|++|.+++..... .......++..++.+ +
T Consensus        46 ---~~~~~e~~~l~~l-----~~~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~-L  114 (360)
T cd05627          46 ---AHIRAERDILVEA-----DGA--WVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLA-I  114 (360)
T ss_pred             ---HHHHHHHHHHHhC-----CCC--CEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               1122333333222     112  2333332222  345899999999999998754221 111122333344433 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHH-------------------
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF-------------------  506 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l-------------------  506 (581)
                      ..||..|++|+||||+|||++       .+|      .++|+|||++..+.......+..-                   
T Consensus       115 ~~lH~~givHrDLkp~NIli~-------~~~------~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (360)
T cd05627         115 DAIHQLGFIHRDIKPDNLLLD-------AKG------HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRK  181 (360)
T ss_pred             HHHHHCCeEccCCCHHHEEEC-------CCC------CEEEeeccCCcccccccccccccccccCCcccccccccccccc
Confidence            889999999999999999998       677      899999999886643322111000                   


Q ss_pred             -----------HHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          507 -----------FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       507 -----------~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                                 ....+-.-.+.++|.+.. .......|.|+|+..+.+++.+
T Consensus       182 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG  232 (360)
T cd05627         182 AETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIG  232 (360)
T ss_pred             cccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccceeeecccC
Confidence                       001112234667777644 3344567999999999998876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.60  E-value=8.4e-15  Score=148.24  Aligned_cols=188  Identities=19%  Similarity=0.164  Sum_probs=127.4

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      .++|+ -..+|.||||.||..+.+.+       |.-.|+|++..+       ++.-|+.+                    
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~-------g~yYAmKvL~k~-------~vVklKQv--------------------   88 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHS-------GNYYAMKVLDKQ-------KVVKLKQV--------------------   88 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccC-------CceeehhhcCHH-------HHHHHHHH--------------------
Confidence            45566 67899999999999999875       799999985432       11111111                    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-----CCCcEEEEeccCCccHHHHHHhhhcchhhHHH-H
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-----VHPAVLVETYEQGECVSRYVDELQGHERLKSA-L  436 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-----~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~-l  436 (581)
                               --..+|-+-+.+          +.+|-++.-+     .+.-.+||||++|+.|..+++....-.....+ .
T Consensus        89 ---------eH~~nEk~vL~~----------v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFY  149 (355)
T KOG0616|consen   89 ---------EHTHNEKRVLKA----------VSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFY  149 (355)
T ss_pred             ---------HHHhhHHHHHhh----------ccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHH
Confidence                     111223332322          2333333211     23347999999999999998753322111122 2


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      |..++ ..++.||..++++||+||+|||++       .+|      .|++.|||.++.++... ..        +.+..+
T Consensus       150 AAeiv-lAleylH~~~iiYRDLKPENiLlD-------~~G------~iKitDFGFAK~v~~rT-~T--------lCGTPe  206 (355)
T KOG0616|consen  150 AAEIV-LALEYLHSLDIIYRDLKPENLLLD-------QNG------HIKITDFGFAKRVSGRT-WT--------LCGTPE  206 (355)
T ss_pred             HHHHH-HHHHHHHhcCeeeccCChHHeeec-------cCC------cEEEEeccceEEecCcE-EE--------ecCCcc
Confidence            33333 458999999999999999999999       888      99999999999997762 22        346655


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      -+|-..+..-.+....|-|+|+--+.|++.+
T Consensus       207 YLAPEii~sk~ynkavDWWalGVLIYEMlaG  237 (355)
T KOG0616|consen  207 YLAPEIIQSKGYNKAVDWWALGVLIYEMLAG  237 (355)
T ss_pred             ccChHHhhcCCCCcchhHHHHHHHHHHHHcC
Confidence            5555555666666789999999999998876

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.60  E-value=1.3e-14  Score=151.05  Aligned_cols=193  Identities=16%  Similarity=0.077  Sum_probs=117.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||||+...+.... ..+                                 
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~~~~-~~~---------------------------------   43 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGT-------DELYAIKILKKDVVIQ-DDD---------------------------------   43 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCC-------CCEEEEEEEEHHHhhh-hhH---------------------------------
Confidence            46899999999999999764       6899999976531100 000                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                        ...+..|...+...    ...+.+.....+.......++||||++|++|.+++..... .......++..++.+ +..
T Consensus        44 --~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~a-L~~  116 (323)
T cd05616          44 --VECTMVEKRVLALS----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIG-LFF  116 (323)
T ss_pred             --HHHHHHHHHHHHhc----cCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-HHH
Confidence              00112232222221    1222221111111122345799999999999988754221 111122344444444 778


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      ||..|++|+|+||+|||++       .+|      .++|+|||++..........     ....-.-.+.++|.+.. ..
T Consensus       117 LH~~~ivHrDlkp~Nill~-------~~~------~~kL~DfG~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~  177 (323)
T cd05616         117 LHSKGIIYRDLKLDNVMLD-------SEG------HIKIADFGMCKENMWDGVTT-----KTFCGTPDYIAPEIIAY-QP  177 (323)
T ss_pred             HHHCCEEecCCCHHHeEEC-------CCC------cEEEccCCCceecCCCCCcc-----ccCCCChhhcCHHHhcC-CC
Confidence            9999999999999999998       677      89999999987543211110     00011123556666543 44


Q ss_pred             CCCCCCHHHHHHHHHHhhhHh
Q 008021          528 QQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .....|.|+|+..+.+++.+.
T Consensus       178 ~~~~~DiwSlGvil~elltg~  198 (323)
T cd05616         178 YGKSVDWWAFGVLLYEMLAGQ  198 (323)
T ss_pred             CCCccchhchhHHHHHHHhCC
Confidence            556789999999999998873

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.60  E-value=1e-14  Score=151.74  Aligned_cols=189  Identities=20%  Similarity=0.087  Sum_probs=115.9

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      .||.|++|+||+|+.+.+       |+.||||+...+....                          .+.+         
T Consensus         2 ~lG~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~~~~--------------------------~~~~---------   39 (321)
T cd05591           2 VLGKGSFGKVMLAELKGT-------DEVYAIKVLKKDVILQ--------------------------DDDV---------   39 (321)
T ss_pred             ccccCCCeEEEEEEECCC-------CCEEEEEEEeHHHhhh--------------------------hhHH---------
Confidence            589999999999999764       6899999865431000                          0000         


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHHHH
Q 008021          371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALLKM  447 (581)
Q Consensus       371 ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l~~  447 (581)
                       -.+..|.+.+...    .+++.+  ++.+..  ....-+|||||++|.+|.+++...... ......++..++.+ +..
T Consensus        40 -~~~~~e~~il~~~----~~hp~i--~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~a-L~~  111 (321)
T cd05591          40 -DCTMTEKRILALA----AKHPFL--TALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLA-LMF  111 (321)
T ss_pred             -HHHHHHHHHHHhc----cCCCCc--cceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HHH
Confidence             0112232222211    123322  222222  223458999999999998877542211 11122334444443 788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      ||..|++|+|+||.||+++       .+|      .++|+|||++..........     ........+.++|.+.. ..
T Consensus       112 LH~~~ivHrDikp~Nill~-------~~~------~~kL~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~  172 (321)
T cd05591         112 LHRHGVIYRDLKLDNILLD-------AEG------HCKLADFGMCKEGILNGVTT-----TTFCGTPDYIAPEILQE-LE  172 (321)
T ss_pred             HHHCCeeccCCCHHHeEEC-------CCC------CEEEeecccceecccCCccc-----cccccCccccCHHHHcC-CC
Confidence            9999999999999999998       677      89999999987542221110     00111234566676543 34


Q ss_pred             CCCCCCHHHHHHHHHHhhhHh
Q 008021          528 QQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .....|.++|+..+.+++.+.
T Consensus       173 ~~~~~DvwslG~il~el~tg~  193 (321)
T cd05591         173 YGPSVDWWALGVLMYEMMAGQ  193 (321)
T ss_pred             CCCccceechhHHHHHHhcCC
Confidence            445679999999999998763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.60  E-value=1.2e-14  Score=151.40  Aligned_cols=190  Identities=19%  Similarity=0.105  Sum_probs=114.9

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|+||+|+.+.+       |+.||||+..++...   .+                       +.++       
T Consensus         1 ~~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~---~~-----------------------~~~~-------   40 (320)
T cd05590           1 RVLGKGSFGKVMLARLKES-------GRLYAVKVLKKDVIL---QD-----------------------DDVE-------   40 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCC-------CCEEEEEEEEHHHHh---hc-----------------------cHHH-------
Confidence            3589999999999999864       689999987643100   00                       0000       


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l~  446 (581)
                         .+..|...+...    ..++++  ++.+.  ......++||||++|.+|.+++...... ......++..++.+ +.
T Consensus        41 ---~~~~e~~~l~~~----~~h~~i--v~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~-L~  110 (320)
T cd05590          41 ---CTMTEKRILSLA----RNHPFL--TQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSA-LM  110 (320)
T ss_pred             ---HHHHHHHHHHhc----cCCCch--hceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHH-HH
Confidence               011222222111    112222  22222  1223457999999999999887542211 11122334444433 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||+|||++       .+|      .++|+|||++..........     ......-.+.++|.+.. .
T Consensus       111 ~lH~~~ivH~dlkp~NIli~-------~~~------~~kL~DfG~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~  171 (320)
T cd05590         111 FLHDKGIIYRDLKLDNVLLD-------HEG------HCKLADFGMCKEGIFNGKTT-----STFCGTPDYIAPEILQE-M  171 (320)
T ss_pred             HHHHCCeEeCCCCHHHeEEC-------CCC------cEEEeeCCCCeecCcCCCcc-----cccccCccccCHHHHcC-C
Confidence            89999999999999999998       677      89999999987542211100     00111223556666543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ......|.|+|+..+.+++.+.
T Consensus       172 ~~~~~~DiwslG~il~el~~g~  193 (320)
T cd05590         172 LYGPSVDWWAMGVLLYEMLCGH  193 (320)
T ss_pred             CCCCccchhhhHHHHHHHhhCC
Confidence            3445679999999999998763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.58  E-value=7e-15  Score=153.33  Aligned_cols=190  Identities=14%  Similarity=0.047  Sum_probs=117.1

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|+.+.+       |+.||||+.++.....                          .+          
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~~~~--------------------------~~----------   37 (323)
T cd05571           1 KLLGKGTFGKVILVREKAT-------GKYYAMKILKKEVIIA--------------------------KD----------   37 (323)
T ss_pred             CeeeeCCCeEEEEEEECCC-------CCEEEEEEEEHHHhhh--------------------------hH----------
Confidence            3589999999999999764       7999999876421000                          00          


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKML  448 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L  448 (581)
                      ....+.+|.+.+.++.     ++++.-...+.......++||||++|.+|.+++..... .......++..++.+ ++.|
T Consensus        38 ~~~~~~~e~~~l~~l~-----hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~-L~~l  111 (323)
T cd05571          38 EVAHTLTESRVLQNTR-----HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA-LGYL  111 (323)
T ss_pred             HHHHHHHHHHHHHhCC-----CCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHH
Confidence            0011233444443321     22222111111223345799999999999988754221 111122334444443 7889


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|+||.||+++       .+|      .++|+|||++..........     ........+.+.|.+.. ...
T Consensus       112 H~~~ivHrDlkp~NIll~-------~~~------~~kl~DfG~a~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~  172 (323)
T cd05571         112 HSCDVVYRDLKLENLMLD-------KDG------HIKITDFGLCKEGISDGATM-----KTFCGTPEYLAPEVLED-NDY  172 (323)
T ss_pred             HhCCeEeCCCCHHHEEEC-------CCC------CEEEeeCCCCcccccCCCcc-----cceecCccccChhhhcC-CCC
Confidence            999999999999999998       667      89999999987532211110     01112234566666543 334


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.|+++..+.+++.+
T Consensus       173 ~~~~DiwSlG~il~elltg  191 (323)
T cd05571         173 GRAVDWWGLGVVMYEMMCG  191 (323)
T ss_pred             CccccCcccchhhhhhhcC
Confidence            5578999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.58  E-value=2.2e-14  Score=149.68  Aligned_cols=190  Identities=16%  Similarity=0.090  Sum_probs=117.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|..+.+       |+.||||+...+...   .+                       +.+       
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~---~~-----------------------~~~-------   44 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGT-------DELYAIKILKKDVVI---QD-----------------------DDV-------   44 (323)
T ss_pred             EEEEEecCCeEEEEEEECCC-------CCEEEEEEEEHHHhh---hh-----------------------hHH-------
Confidence            47899999999999998765       799999986542100   00                       000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+..|...+...    ...+.  ++..+.  ......++||||++|++|.+++..... .......++..++.+ +
T Consensus        45 ---~~~~~e~~~l~~~----~~~~~--i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~a-l  114 (323)
T cd05615          45 ---ECTMVEKRVLALQ----DKPPF--LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVG-L  114 (323)
T ss_pred             ---HHHHHHHHHHHhc----cCCCc--hhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence               0112233322211    11121  222221  112345799999999999988754221 112223344444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||+|||++       .+|      .++|+|||++..........     ........+.++|.+.. 
T Consensus       115 ~~lH~~~ivHrDikp~Nill~-------~~~------~ikL~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-  175 (323)
T cd05615         115 FFLHRRGIIYRDLKLDNVMLD-------SEG------HIKIADFGMCKEHMVDGVTT-----RTFCGTPDYIAPEIIAY-  175 (323)
T ss_pred             HHHHHCCeeccCCCHHHeEEC-------CCC------CEEEeccccccccCCCCccc-----cCccCCccccCHHHHcC-
Confidence            889999999999999999998       667      89999999987543221110     00111234566776543 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+|+..+.+++.+
T Consensus       176 ~~~~~~~DiwslGvil~elltG  197 (323)
T cd05615         176 QPYGKSVDWWAYGVLLYEMLAG  197 (323)
T ss_pred             CCCCCccchhhhHHHHHHHHhC
Confidence            3445578999999999999877

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=1.8e-14  Score=149.42  Aligned_cols=189  Identities=16%  Similarity=0.084  Sum_probs=117.1

Q ss_pred             ecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHH
Q 008021          292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ  371 (581)
Q Consensus       292 IgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~E  371 (581)
                      ||+|++|.||+|+...+       ++.||||+..+....    +                      ..          ..
T Consensus         1 lg~G~~g~Vy~~~~~~~-------~~~~aiK~i~~~~~~----~----------------------~~----------~~   37 (312)
T cd05585           1 IGKGSFGKVMQVRKRDT-------QRIYALKTIRKAHIV----S----------------------RS----------EV   37 (312)
T ss_pred             CCcCCCeEEEEEEECCC-------CCEEEEEEEEHHHhh----h----------------------hh----------HH
Confidence            68999999999999865       689999986532000    0                      00          00


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhh
Q 008021          372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLV  450 (581)
Q Consensus       372 lDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~  450 (581)
                      ..+..|...+.++     +++++.-...........++||||++|++|.+++..... .......++..++.+ +..||.
T Consensus        38 ~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~-l~~lH~  111 (312)
T cd05585          38 THTLAERTVLAQV-----NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCA-LENLHK  111 (312)
T ss_pred             HHHHHHHHHHHhC-----CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHh
Confidence            1123344444333     123222111111223456899999999999998754221 111122344444443 788999


Q ss_pred             CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCC
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQN  530 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~  530 (581)
                      .|++|+|+||.|||++       .+|      .++|+|||++..........     ........+.++|.+.. .....
T Consensus       112 ~~i~HrDlkp~Nili~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~~~  172 (312)
T cd05585         112 FNVIYRDLKPENILLD-------YQG------HIALCDFGLCKLNMKDDDKT-----NTFCGTPEYLAPELLLG-HGYTK  172 (312)
T ss_pred             CCeEeCCCCHHHeEEC-------CCC------cEEEEECcccccCccCCCcc-----ccccCCcccCCHHHHcC-CCCCC
Confidence            9999999999999998       667      89999999987543221110     01112234567776654 33445


Q ss_pred             CCCHHHHHHHHHHhhhHh
Q 008021          531 CPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       531 ~~D~~~f~~~l~~l~~~~  548 (581)
                      ..|.|+|+..+.+++.+.
T Consensus       173 ~~DvwslGvil~el~tg~  190 (312)
T cd05585         173 AVDWWTLGVLLYEMLTGL  190 (312)
T ss_pred             ccceechhHHHHHHHhCC
Confidence            679999999999998773

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=1.4e-14  Score=157.04  Aligned_cols=208  Identities=15%  Similarity=0.146  Sum_probs=143.5

Q ss_pred             HHHHHHHHHHHh-CCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHH
Q 008021          265 FAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA  343 (581)
Q Consensus       265 ~~~~~~~le~el-G~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la  343 (581)
                      -+++...+..-. ..++.+.|..|  +-||.|+-|-||.|+...+       ++.||||...-.  .+-.          
T Consensus       255 ~~~~~~~l~~v~~~~dP~~~y~~~--~kigqgaSG~vy~A~~~~~-------~~~VaiK~m~l~--~Q~~----------  313 (550)
T KOG0578|consen  255 KEEILAKLKRVVSQGDPRSKYTDF--KKIGQGATGGVYVARKIST-------KQEVAIKRMDLR--KQPK----------  313 (550)
T ss_pred             HHHHHHHhheeccCCChhhhhcch--hhhccccccceeeeeeccC-------CceEEEEEEEec--cCCc----------
Confidence            334444444322 33455556655  4599999999999999875       689999974311  1100          


Q ss_pred             HHhcccccccccChhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHH
Q 008021          344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE--AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR  421 (581)
Q Consensus       344 ~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~E--a~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~  421 (581)
                                           ++.+..|+...++  ..|+..|.+.|-..             ..-+.||||++|++|.+
T Consensus       314 ---------------------keLilnEi~Vm~~~~H~NiVnfl~Sylv~-------------deLWVVMEym~ggsLTD  359 (550)
T KOG0578|consen  314 ---------------------KELLLNEILVMRDLHHPNIVNFLDSYLVG-------------DELWVVMEYMEGGSLTD  359 (550)
T ss_pred             ---------------------hhhhHHHHHHHHhccchHHHHHHHHhccc-------------ceeEEEEeecCCCchhh
Confidence                                 1233445555444  34777777655322             33458999999999999


Q ss_pred             HHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHH
Q 008021          422 YVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRV  501 (581)
Q Consensus       422 ~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~  501 (581)
                      .+....-....-..+.+..+++ |+.||..|++|+|+|-.|||+.       .+|      .++|.|||++..++++...
T Consensus       360 vVt~~~~~E~qIA~Icre~l~a-L~fLH~~gIiHrDIKSDnILL~-------~~g------~vKltDFGFcaqi~~~~~K  425 (550)
T KOG0578|consen  360 VVTKTRMTEGQIAAICREILQG-LKFLHARGIIHRDIKSDNILLT-------MDG------SVKLTDFGFCAQISEEQSK  425 (550)
T ss_pred             hhhcccccHHHHHHHHHHHHHH-HHHHHhcceeeeccccceeEec-------cCC------cEEEeeeeeeeccccccCc
Confidence            8865322222222333333333 8899999999999999999999       788      8999999999999887621


Q ss_pred             HHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          502 NLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       502 ~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                            .+-+-+-+|.+|......-.++...|.|.++-..-|++++
T Consensus       426 ------R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveG  465 (550)
T KOG0578|consen  426 ------RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEG  465 (550)
T ss_pred             ------cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcC
Confidence                  1123467777777777778888899999999999999988

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.58  E-value=1.4e-14  Score=154.56  Aligned_cols=188  Identities=22%  Similarity=0.218  Sum_probs=122.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeE-EEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIV-VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~-VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      +-+|+|++|+||+|..+         |+. ||||+..+.-...                           +.        
T Consensus        47 ~~iG~G~~g~V~~~~~~---------g~~~vavK~~~~~~~~~---------------------------~~--------   82 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWR---------GTDVVAVKIISDPDFDD---------------------------ES--------   82 (362)
T ss_pred             hhcccCCceeEEEEEeC---------CceeEEEEEecchhcCh---------------------------HH--------
Confidence            34999999999999997         456 9999876642110                           00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccCCCCcEEEEeccCCccHHHHHHhh-hcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDEL-QGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~-~~~--~~~~~~la~~~i~a~  444 (581)
                        +-+|++|+.-+.+++     +++| .+...+.+-...-.|||||++|++|.+++... ...  ....-.++..++. .
T Consensus        83 --~~~f~~E~~il~~l~-----HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiAr-G  154 (362)
T KOG0192|consen   83 --RKAFRREASLLSRLR-----HPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIAR-G  154 (362)
T ss_pred             --HHHHHHHHHHHHhCC-----CCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHH-H
Confidence              345777887776642     3332 22222211111247999999999999998652 111  1112233333333 3


Q ss_pred             HHHhhhCC-eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH-HHHHHH
Q 008021          445 LKMLLVDN-FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR-TAAECT  522 (581)
Q Consensus       445 l~~L~~~G-~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~-~~~e~l  522 (581)
                      +..||..+ +||+||||.||||+       .++     ..++++|||+++......     .-..+ ..+.+. -|+|.+
T Consensus       155 m~YLH~~~~iIHrDLK~~NiLv~-------~~~-----~~~KI~DFGlsr~~~~~~-----~~~~~-~~GT~~wMAPEv~  216 (362)
T KOG0192|consen  155 MEYLHSEGPIIHRDLKSDNILVD-------LKG-----KTLKIADFGLSREKVISK-----TSMTS-VAGTYRWMAPEVL  216 (362)
T ss_pred             HHHHhcCCCeeecccChhhEEEc-------CCC-----CEEEECCCccceeecccc-----ccccC-CCCCccccChhhh
Confidence            77899999 99999999999999       331     279999999998765432     00000 233333 444554


Q ss_pred             Hh-hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LR-LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~-l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. -..+....|...|.-.+.+++++
T Consensus       217 ~~~~~~~~~K~DvySFgIvlWEl~t~  242 (362)
T KOG0192|consen  217 RGEKSPYTEKSDVYSFGIVLWELLTG  242 (362)
T ss_pred             cCCCCcCCccchhhhHHHHHHHHHHC
Confidence            43 46677888999999999999987

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.58  E-value=1.4e-14  Score=151.75  Aligned_cols=189  Identities=14%  Similarity=0.073  Sum_probs=118.5

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|+||+|..+.+       |+.||||+..+.....                          .+          
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-------~~~~avK~~~~~~~~~--------------------------~~----------   37 (328)
T cd05593           1 KLLGKGTFGKVILVREKAS-------GKYYAMKILKKEVIIA--------------------------KD----------   37 (328)
T ss_pred             CeeeeCCCEEEEEEEECCC-------CCEEEEEEEEHHHhhh--------------------------hh----------
Confidence            3589999999999999765       7999999976431100                          00          


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                      ...++.+|.+.+.++     .++++  ++.+.  ......++||||++|.+|.+++..... .......++..++.+ +.
T Consensus        38 ~~~~~~~E~~~l~~l-----~hp~i--v~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~a-L~  109 (328)
T cd05593          38 EVAHTLTESRVLKNT-----RHPFL--TSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSA-LD  109 (328)
T ss_pred             HHHHHHHHHHHHHhC-----CCCCC--cceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-HH
Confidence            001223344444332     12222  22222  223345899999999999887754221 111223344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||.|||++       .+|      .++|+|||++.........     .........+.+.|.+.. .
T Consensus       110 ~LH~~~ivHrDikp~NIll~-------~~~------~~kL~DfG~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~-~  170 (328)
T cd05593         110 YLHSGKIVYRDLKLENLMLD-------KDG------HIKITDFGLCKEGITDAAT-----MKTFCGTPEYLAPEVLED-N  170 (328)
T ss_pred             HHHhCCeEecccCHHHeEEC-------CCC------cEEEecCcCCccCCCcccc-----cccccCCcCccChhhhcC-C
Confidence            89999999999999999998       667      8999999998754221110     001112234566776543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ......|.++|+..+.+++.+.
T Consensus       171 ~~~~~~DiwslGvil~elltG~  192 (328)
T cd05593         171 DYGRAVDWWGLGVVMYEMMCGR  192 (328)
T ss_pred             CCCccCCccccchHHHHHhhCC
Confidence            4456789999999999998773

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.58  E-value=1.3e-14  Score=148.53  Aligned_cols=188  Identities=14%  Similarity=0.119  Sum_probs=117.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+       ++.||||+.+.......                                    
T Consensus        10 ~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~~------------------------------------   46 (288)
T cd07871          10 LDKLGEGTYATVFKGRSKLT-------ENLVALKEIRLEHEEGA------------------------------------   46 (288)
T ss_pred             eeEEecCCCEEEEEEEECCC-------CCEEEEEEecccccCCc------------------------------------
Confidence            57899999999999998765       69999998653211000                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        +..+.+|.+.+.++.     ++++  .+.+...  ....++||||++| +|.+++.....  .......++..++.+ 
T Consensus        47 --~~~~~~E~~~l~~l~-----h~ni--v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~a-  115 (288)
T cd07871          47 --PCTAIREVSLLKNLK-----HANI--VTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRG-  115 (288)
T ss_pred             --chhHHHHHHHHHhCC-----CCCE--eeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHH-
Confidence              001123444443331     2222  2222222  2335799999998 78877754221  111123344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||.|||++       .+|      +++|+|||++..........     ......-.+.++|.+..
T Consensus       116 L~~LH~~~ivH~dlkp~Nil~~-------~~~------~~kl~DfG~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~  177 (288)
T cd07871         116 LSYCHKRKILHRDLKPQNLLIN-------EKG------ELKLADFGLARAKSVPTKTY-----SNEVVTLWYRPPDVLLG  177 (288)
T ss_pred             HHHHHhCCcccCCCCHHHEEEC-------CCC------CEEECcCcceeeccCCCccc-----cCceecccccChHHhcC
Confidence            7889999999999999999998       667      89999999987643221110     00011234566776654


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      -.......|.|+++..+.+++++.
T Consensus       178 ~~~~~~~~DiwslG~~l~~l~~g~  201 (288)
T cd07871         178 STEYSTPIDMWGVGCILYEMATGR  201 (288)
T ss_pred             CcccCcHHHHHHHHHHHHHHHhCC
Confidence            444555679999999999998773

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.57  E-value=3.9e-15  Score=160.65  Aligned_cols=186  Identities=17%  Similarity=0.185  Sum_probs=130.9

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +-||.||+|.||||+.+.+       .+.||+|+...--  .-+.|+                             +.+.
T Consensus         8 e~iG~Gsfg~VYKgrrK~t-------~~~vAik~i~K~g--r~~k~l-----------------------------~~l~   49 (808)
T KOG0597|consen    8 EMIGEGSFGRVYKGRRKYT-------IQVVAIKFIDKSG--RNEKEL-----------------------------KNLR   49 (808)
T ss_pred             HHhcCCccceeeecccccc-------eeEEEEEEehhcC--CchHHH-----------------------------HHHH
Confidence            5689999999999999876       6999999853221  111222                             2344


Q ss_pred             HHHHHHHHHH--HHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAA--HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~--nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                      +|++..++.+  |+..|.+.|+...+             -++|.||+.| .|..+++.... ....-.+++..++.+ ++
T Consensus        50 ~ev~i~r~lkHpniv~m~esfEt~~~-------------~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsa-L~  114 (808)
T KOG0597|consen   50 QEVRILRSLKHPNIVEMLESFETSAH-------------LWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSA-LY  114 (808)
T ss_pred             HHHHHHHhcCCcchhhHHHhhcccce-------------EEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHH-HH
Confidence            5555555543  56666655544333             3589999999 88888865322 223335566666655 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||.++++|||+||.|||+.       ..|      .++|+|||+++.++...      .+..-+.+...-++-.+++-+
T Consensus       115 yLhs~rilhrd~kPqniLl~-------~~~------~~KlcdFg~Ar~m~~~t------~vltsikGtPlYmAPElv~e~  175 (808)
T KOG0597|consen  115 YLHSNRILHRDMKPQNILLE-------KGG------TLKLCDFGLARAMSTNT------SVLTSIKGTPLYMAPELVEEQ  175 (808)
T ss_pred             HHHhcCcccccCCcceeeec-------CCC------ceeechhhhhhhcccCc------eeeeeccCcccccCHHHHcCC
Confidence            99999999999999999999       667      89999999999876632      112223455444444455667


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+....|.|++++.+.|++.+
T Consensus       176 pyd~~sDlWslGcilYE~~~G  196 (808)
T KOG0597|consen  176 PYDHTSDLWSLGCILYELYVG  196 (808)
T ss_pred             CccchhhHHHHHHHHHHHhcC
Confidence            777788999999999998766

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.57  E-value=6.4e-15  Score=157.18  Aligned_cols=194  Identities=17%  Similarity=0.135  Sum_probs=117.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       ++.||||+....       +..                       ....    
T Consensus         6 ~~~LG~G~~g~Vy~a~~~~~-------~~~~aiK~i~~~-------~~~-----------------------~~~~----   44 (382)
T cd05625           6 IKTLGIGAFGEVCLARKVDT-------KALYAMKTLRKK-------DVL-----------------------LRNQ----   44 (382)
T ss_pred             EEEEEeCCCEEEEEEEECCC-------CCEEEEEEEeHH-------Hhh-----------------------hHHH----
Confidence            47899999999999999765       699999986532       000                       0000    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|...+.++.     +++  +++.+..+  ....+|||||++|++|.+++..... .......++..++. .+
T Consensus        45 --~~~~~~E~~il~~~~-----h~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~-al  114 (382)
T cd05625          45 --VAHVKAERDILAEAD-----NEW--VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTC-AV  114 (382)
T ss_pred             --HHHHHHHHHHHHhCC-----CCc--CCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHH-HH
Confidence              012233443333321     222  22333222  2345899999999999998754221 11111223333333 37


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHH----------------------
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNL----------------------  503 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l----------------------  503 (581)
                      ..+|..|++|+|+||.|||++       .+|      .++|+|||++..+.......+                      
T Consensus       115 ~~lH~~~ivHrDlKp~NILl~-------~~g------~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (382)
T cd05625         115 ESVHKMGFIHRDIKPDNILID-------RDG------HIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPA  181 (382)
T ss_pred             HHHHhCCeecCCCCHHHEEEC-------CCC------CEEEeECCCCccccccccccccccccccccccccccccccccc
Confidence            889999999999999999998       677      899999999754321000000                      


Q ss_pred             ----------HH----------HHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          504 ----------VE----------FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       504 ----------~~----------l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                                ..          ....+.-...+.++|.+... .+....|.|++++.+.+++.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~DiwSlGvil~elltG  244 (382)
T cd05625         182 NCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVG  244 (382)
T ss_pred             cccccccccchhhhhccccccccccccccCcccCCHHHhcCC-CCCCeeeEEechHHHHHHHhC
Confidence                      00          00011122346778877543 344577999999999999876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.57  E-value=2e-14  Score=149.82  Aligned_cols=192  Identities=15%  Similarity=0.054  Sum_probs=116.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|..+.+       |+.||||+.++....  ..                        +.    .+  
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~~~--~~------------------------~~----~~--   44 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKT-------GELYAIKALKKGDII--AR------------------------DE----VE--   44 (324)
T ss_pred             EEEEeecCCEEEEEEEECCC-------CCEEEEEEEEHHHhh--hh------------------------hH----HH--
Confidence            46799999999999999765       699999997653100  00                        00    00  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                          .+..|.+-+.... .. .++++  .+.+  .......++||||++|.+|..++....-.......++..++.+ +.
T Consensus        45 ----~l~~e~~~~~~~~-~l-~hp~i--~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~a-l~  115 (324)
T cd05589          45 ----SLMCEKRIFETAN-SE-RHPFL--VNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLG-LQ  115 (324)
T ss_pred             ----HHHHHHHHHHhcc-cc-CCCCh--hceeeEEEcCCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHH-HH
Confidence                1122222221111 00 12222  2222  1223445899999999999887754222222223344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||.||+++       .+|      .++|+|||++..........     ........+.+.|.+.. .
T Consensus       116 ~lH~~~ivHrdlkp~Nill~-------~~~------~~kL~Dfg~~~~~~~~~~~~-----~~~~g~~~y~aPE~~~~-~  176 (324)
T cd05589         116 YLHENKIVYRDLKLDNLLLD-------TEG------FVKIADFGLCKEGMGFGDRT-----STFCGTPEFLAPEVLTE-T  176 (324)
T ss_pred             HHHhCCeEecCCCHHHeEEC-------CCC------cEEeCcccCCccCCCCCCcc-----cccccCccccCHhHhcC-C
Confidence            89999999999999999998       667      89999999887542211100     00111223556666543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.|+|+..+.+++.+
T Consensus       177 ~~~~~~DiwslG~il~el~~G  197 (324)
T cd05589         177 SYTRAVDWWGLGVLIYEMLVG  197 (324)
T ss_pred             CCCcccchhhHHHHHHHHHhC
Confidence            344567999999999999877

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.57  E-value=1.7e-14  Score=154.04  Aligned_cols=191  Identities=15%  Similarity=0.117  Sum_probs=120.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||+|+....-  ....                            .     
T Consensus        48 ~~~lG~G~fg~Vy~~~~~~~-------~~~~aiK~i~~~~--~~~~----------------------------~-----   85 (371)
T cd05622          48 VKVIGRGAFGEVQLVRHKST-------RKVYAMKLLSKFE--MIKR----------------------------S-----   85 (371)
T ss_pred             EEEEeecCCeEEEEEEECCC-------CcEEEEEEEEHHH--hhhh----------------------------H-----
Confidence            57899999999999999875       7999999864310  0000                            0     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                       ..-.+.+|...+..+     ++++  +++.+..+  ....++||||++|++|.+++............++..++.+ ++
T Consensus        86 -~~~~~~~e~~i~~~~-----~hp~--iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~a-L~  156 (371)
T cd05622          86 -DSAFFWEERDIMAFA-----NSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA-LD  156 (371)
T ss_pred             -HHHHHHHHHHHHHhC-----CCCC--CCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHH-HH
Confidence             001122333322221     1222  22233222  2345799999999999998865322222223334444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+||||.|||++       .+|      +++|+|||++..+........    ......-.+.++|.+....
T Consensus       157 ~LH~~~ivHrDLkp~NIll~-------~~~------~ikL~DfG~a~~~~~~~~~~~----~~~~gt~~y~aPE~l~~~~  219 (371)
T cd05622         157 AIHSMGFIHRDVKPDNMLLD-------KSG------HLKLADFGTCMKMNKEGMVRC----DTAVGTPDYISPEVLKSQG  219 (371)
T ss_pred             HHHHCCEEeCCCCHHHEEEC-------CCC------CEEEEeCCceeEcCcCCcccc----cCcccCccccCHHHHhccC
Confidence            89999999999999999998       667      899999999987754321110    0111223456777765432


Q ss_pred             ---CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 ---KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ---~~~~~~D~~~f~~~l~~l~~~  547 (581)
                         ......|.|+|+..+.+++.+
T Consensus       220 ~~~~~~~~~DiwSlGvilyell~G  243 (371)
T cd05622         220 GDGYYGRECDWWSVGVFLYEMLVG  243 (371)
T ss_pred             CCccCCCccceeehhHHHHHHHhC
Confidence               234567999999999999876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=1.2e-14  Score=152.14  Aligned_cols=191  Identities=14%  Similarity=0.133  Sum_probs=117.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       ++.||||+.+..       +.  ..                     ..     
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~-------~~--~~---------------------~~-----   43 (331)
T cd05597           6 LKVIGRGAFGEVAVVKMKNT-------GQVYAMKILNKW-------EM--LK---------------------RA-----   43 (331)
T ss_pred             EEEEEecCCeEEEEEEECCC-------CCEEEEEEEEHH-------HH--hh---------------------hh-----
Confidence            47899999999999999875       689999986531       00  00                     00     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                       ..-.+.+|...+..+     +++.  ++..+..+  ....++||||++|++|.+++.....  .......++..++. .
T Consensus        44 -~~~~~~~e~~~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~-~  114 (331)
T cd05597          44 -ETACFREERDVLVNG-----DRRW--ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVL-A  114 (331)
T ss_pred             -hHHHHHHHHHHHHhC-----CCCC--CCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH-H
Confidence             001122333322221     1222  22222222  2345799999999999998854221  11112233333333 3


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||.|||++       .+|      .++|+|||++..+.......-.    .....-.+.+.|.+..
T Consensus       115 l~~lH~~~ivH~dlkp~Nill~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~----~~~gt~~y~aPE~~~~  177 (331)
T cd05597         115 IDSVHQLGYVHRDIKPDNVLLD-------KNG------HIRLADFGSCLRLLADGTVQSN----VAVGTPDYISPEILQA  177 (331)
T ss_pred             HHHHHhCCeEECCCCHHHEEEC-------CCC------CEEEEECCceeecCCCCCcccc----ceeccccccCHHHHhh
Confidence            7889999999999999999998       667      8999999998766543221100    0011224566777653


Q ss_pred             h----cCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 L----SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l----~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .    +......|.|+|+..+.+++.+
T Consensus       178 ~~~~~~~~~~~~DiwslG~~l~el~~g  204 (331)
T cd05597         178 MEDGKGRYGPECDWWSLGVCMYEMLYG  204 (331)
T ss_pred             ccccccCCCCcceeehhhhHHHHHhhC
Confidence            2    2234467999999999998876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.57  E-value=1.2e-14  Score=155.16  Aligned_cols=191  Identities=13%  Similarity=0.069  Sum_probs=120.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||+|+....-.                               ...     
T Consensus        48 ~~~lG~G~fg~Vy~~~~~~~-------~~~~aiK~~~~~~~-------------------------------~~~-----   84 (370)
T cd05621          48 VKVIGRGAFGEVQLVRHKSS-------QKVYAMKLLSKFEM-------------------------------IKR-----   84 (370)
T ss_pred             EEEEEecCCeEEEEEEECCC-------CCEEEEEEEEHHHh-------------------------------hhh-----
Confidence            46799999999999999875       69999998642100                               000     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                      ...-.+..|...+..+     ++++  +++.+..  .....++||||++|++|.+++............++..++.+ +.
T Consensus        85 ~~~~~~~~e~~i~~~~-----~hp~--iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~a-L~  156 (370)
T cd05621          85 SDSAFFWEERDIMAFA-----NSPW--VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLA-LD  156 (370)
T ss_pred             hhHHHHHHHHHHHHhC-----CCCC--EeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHH-HH
Confidence            0001122233322221     1222  2222222  22345899999999999998865322222223344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|+||+|||++       .+|      .++|+|||++..+........    ......-.+.++|.+....
T Consensus       157 ~LH~~~IvHrDLKp~NILl~-------~~~------~~kL~DFG~a~~~~~~~~~~~----~~~~gt~~Y~aPE~~~~~~  219 (370)
T cd05621         157 AIHSMGLIHRDVKPDNMLLD-------KHG------HLKLADFGTCMKMDETGMVRC----DTAVGTPDYISPEVLKSQG  219 (370)
T ss_pred             HHHHCCeEecCCCHHHEEEC-------CCC------CEEEEecccceecccCCceec----ccCCCCcccCCHHHHhccC
Confidence            89999999999999999998       667      899999999987754322110    0111223467777776543


Q ss_pred             ---CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 ---KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ---~~~~~~D~~~f~~~l~~l~~~  547 (581)
                         ......|.|+++..+.+++.+
T Consensus       220 ~~~~~~~~~DiwSlG~ilyell~G  243 (370)
T cd05621         220 GDGYYGRECDWWSVGVFLFEMLVG  243 (370)
T ss_pred             CCCCCCcccCEEeehHHHHHHHhC
Confidence               234568999999999998876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=9.5e-15  Score=153.20  Aligned_cols=197  Identities=18%  Similarity=0.126  Sum_probs=127.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.+|+|.+|.|-+|..+.+       |+.||||+.+..--..             .   -+                ..
T Consensus       177 ~~~LGsGafg~Vkla~e~~t-------gk~vAiKIi~krk~~~-------------~---s~----------------~~  217 (475)
T KOG0615|consen  177 SKTLGSGAFGLVKLAYEKKT-------GKQVAIKIINKRKSTG-------------C---SR----------------AI  217 (475)
T ss_pred             eeeecCCceeEEEEEEEccc-------CcEEEeeeeehhhccc-------------c---cc----------------cc
Confidence            68899999999999999987       7999999976531000             0   00                01


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                      ..+.|.++|..-+.++.     +|.|.--+-+.+-....++||||++|+.|-+.+-.... ....-+.+..+++.+ ++.
T Consensus       218 ~~~~~v~~EieILkkL~-----HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~a-vkY  291 (475)
T KOG0615|consen  218 AKTRDVQNEIEILKKLS-----HPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTA-VKY  291 (475)
T ss_pred             cchhhhHHHHHHHHhcC-----CCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHH-HHH
Confidence            12344556666665542     23322111111222233799999999999988754221 222234555666555 788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh-hHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT-DRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~-~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      ||+.|++||||||.|||+....    .      ...+++.|||+++..... ..+.+|       -.-.|-|+|.+..-+
T Consensus       292 LH~~GI~HRDiKPeNILl~~~~----e------~~llKItDFGlAK~~g~~sfm~TlC-------GTpsYvAPEVl~~kg  354 (475)
T KOG0615|consen  292 LHSQGIIHRDIKPENILLSNDA----E------DCLLKITDFGLAKVSGEGSFMKTLC-------GTPSYVAPEVLASKG  354 (475)
T ss_pred             HHHcCcccccCCcceEEeccCC----c------ceEEEecccchhhccccceehhhhc-------CCccccChhheecCC
Confidence            9999999999999999998221    1      238999999999987543 334444       233567778776654


Q ss_pred             CCC--CCCCHHHHHHHHHHhhhH
Q 008021          527 KQQ--NCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~--~~~D~~~f~~~l~~l~~~  547 (581)
                      ...  ...|.|.+++.+.-.+++
T Consensus       355 ~~~~~~kVDiWSlGcvLfvcLsG  377 (475)
T KOG0615|consen  355 VEYYPSKVDIWSLGCVLFVCLSG  377 (475)
T ss_pred             eecccchheeeeccceEEEEecc
Confidence            432  356889988887766655

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.57  E-value=2.7e-14  Score=148.86  Aligned_cols=190  Identities=16%  Similarity=0.077  Sum_probs=116.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||||+.+++....                          .+.+       
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~-------~~~~avK~~~~~~~~~--------------------------~~~~-------   44 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGT-------DELYAIKILKKDVIIQ--------------------------DDDV-------   44 (324)
T ss_pred             EEEEeeccCeEEEEEEECCC-------CCEEEEEEEEHHHhhh--------------------------hhHH-------
Confidence            47899999999999998764       6899999976531100                          0000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+..|.+.+..+.    ..+.  ++..+.  ......++||||++|++|.+++..... .......++..++.+ +
T Consensus        45 ---~~~~~e~~~l~~~~----~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~a-l  114 (324)
T cd05587          45 ---ECTMVEKRVLALPG----KPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIG-L  114 (324)
T ss_pred             ---HHHHHHHHHHHhcC----CCCc--eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence               01223333333221    1111  222221  122345799999999999988754221 111122233334433 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||.|||++       .+|      .++|+|||++..........     ........+.++|.+.. 
T Consensus       115 ~~lH~~~ivH~dlkp~Nill~-------~~~------~~kL~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-  175 (324)
T cd05587         115 FFLHSKGIIYRDLKLDNVMLD-------AEG------HIKIADFGMCKENIFGGKTT-----RTFCGTPDYIAPEIIAY-  175 (324)
T ss_pred             HHHHHCCeEecCCCHHHeEEc-------CCC------CEEEeecCcceecCCCCCce-----eeecCCccccChhhhcC-
Confidence            889999999999999999998       667      89999999986432111100     00111234556666543 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++++..+.+++.+
T Consensus       176 ~~~~~~~DiwslGvil~elltG  197 (324)
T cd05587         176 QPYGKSVDWWAFGVLLYEMLAG  197 (324)
T ss_pred             CCCCcccchhhhHHHHHHHHhC
Confidence            3344567999999999999877

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.57  E-value=2e-14  Score=146.85  Aligned_cols=190  Identities=17%  Similarity=0.120  Sum_probs=119.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|..+.+       |+.||||+..+.....                                    .
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~~------------------------------------~   41 (285)
T cd05631           5 YRVLGKGGFGEVCACQVRAT-------GKMYACKKLEKKRIKK------------------------------------R   41 (285)
T ss_pred             EEEEecCCCEEEEEEEEecC-------CceEEEEEeeHhhhhh------------------------------------h
Confidence            46799999999999999865       7999999865431100                                    0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l  445 (581)
                      ..+..+.+|.+.+.++.     ++.+.............++||||++|++|.+++......   ......++..++.+ +
T Consensus        42 ~~~~~~~~E~~il~~l~-----~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~-l  115 (285)
T cd05631          42 KGEAMALNEKRILEKVN-----SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG-L  115 (285)
T ss_pred             hhHHHHHHHHHHHHhcC-----CCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHH-H
Confidence            01122344555554432     122211111112233468999999999998876432111   11112233333333 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||.|||++       .++      .++|+|||++..++......      .......+.+.|.+.. 
T Consensus       116 ~~lH~~~iiH~dikp~Nill~-------~~~------~~kl~Dfg~~~~~~~~~~~~------~~~g~~~y~aPE~~~~-  175 (285)
T cd05631         116 EDLQRERIVYRDLKPENILLD-------DRG------HIRISDLGLAVQIPEGETVR------GRVGTVGYMAPEVINN-  175 (285)
T ss_pred             HHHHhCCEEeCCCCHHHEEEC-------CCC------CEEEeeCCCcEEcCCCCeec------CCCCCCCccCHhhhcC-
Confidence            789999999999999999998       666      89999999988764332110      1112334566776643 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+|+..+.+++.+
T Consensus       176 ~~~~~~~DvwslGvil~el~~g  197 (285)
T cd05631         176 EKYTFSPDWWGLGCLIYEMIQG  197 (285)
T ss_pred             CCCCcccCchhHHHHHHHHHhC
Confidence            3445567999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.57  E-value=2.3e-15  Score=160.15  Aligned_cols=194  Identities=18%  Similarity=0.147  Sum_probs=116.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.+..       +..                       .....   
T Consensus         6 ~~~lG~G~~g~V~~a~~~~~-------~~~~avK~~~~~-------~~~-----------------------~~~~~---   45 (376)
T cd05598           6 IKTIGIGAFGEVCLVRKVDT-------NALYAMKTLRKA-------DVL-----------------------MRNQA---   45 (376)
T ss_pred             EEEEEeCCCeEEEEEEECCC-------CCEEEEEEEcHH-------HHH-----------------------hhhhH---
Confidence            57899999999999999875       799999986432       000                       00000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|...+.++     ++++  +++.+..  .....++||||++|++|.+++..... .......++..++. .+
T Consensus        46 ---~~~~~E~~il~~l-----~h~~--iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~-al  114 (376)
T cd05598          46 ---AHVKAERDILAEA-----DNEW--VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTC-AI  114 (376)
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--cceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHH-HH
Confidence               1122333333322     1222  2222322  23445799999999999998864321 11111223333333 37


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh---------------------------
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT---------------------------  498 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~---------------------------  498 (581)
                      ..||..|++|+||||+|||++       .+|      .++|+|||++..+...                           
T Consensus       115 ~~lH~~~ivHrDlkp~Nill~-------~~~------~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (376)
T cd05598         115 ESVHKMGFIHRDIKPDNILID-------RDG------HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEID  181 (376)
T ss_pred             HHHHHCCeEeCCCCHHHEEEC-------CCC------CEEEEeCCCCccccccccccccccccccccccccccccccccc
Confidence            889999999999999999998       667      8999999997543100                           


Q ss_pred             -------hHHHHHH----HHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          499 -------DRVNLVE----FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       499 -------~r~~l~~----l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                             .+.....    .-..+.-...+.++|.+.. .......|.|+|+..+.+++.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell~G  240 (376)
T cd05598         182 RCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVG  240 (376)
T ss_pred             cccccchhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehhhC
Confidence                   0000000    0001112234566776644 3344567999999999988766

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=5e-15  Score=155.13  Aligned_cols=194  Identities=16%  Similarity=0.061  Sum_probs=119.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+...+       |+.||||+.+.....  .                            .+     
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~~~--~----------------------------~~-----   43 (350)
T cd05573           6 IKVIGRGAFGEVWLVRDKDT-------GQVYAMKVLRKSDMI--K----------------------------RN-----   43 (350)
T ss_pred             EEEEEeCCcEEEEEEEECCC-------CCEEEEEEEEHHHHh--h----------------------------cc-----
Confidence            46899999999999999864       699999997542100  0                            00     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                       ..-.+..|...+..+.     +++  +++.+..  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        44 -~~~~~~~e~~~l~~~~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~a-L  114 (350)
T cd05573          44 -QIAHVRAERDILADAD-----SPW--IVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLA-L  114 (350)
T ss_pred             -HHHHHHHHHHHHHhcC-----CCC--ccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence             0011223333332221     111  2222221  22345799999999999998865311 112223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHH----------------------
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNL----------------------  503 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l----------------------  503 (581)
                      ..||..|++|+|+||.|||++       .+|      .++|+|||++..+........                      
T Consensus       115 ~~LH~~giiH~Dlkp~NIll~-------~~~------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (350)
T cd05573         115 DSVHKLGFIHRDIKPDNILID-------ADG------HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHK  181 (350)
T ss_pred             HHHHHCCeeccCCCHHHeEEC-------CCC------CEEeecCCCCccCcccCcccccccccccccccccccccccccc
Confidence            889999999999999999998       677      899999999987655430000                      


Q ss_pred             --HHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          504 --VEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       504 --~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                        ..........-.+.++|.+... ......|.++|+..+.+++.+
T Consensus       182 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g  226 (350)
T cd05573         182 QRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYG  226 (350)
T ss_pred             cccccccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccC
Confidence              0000011122345666766443 445578999999999999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.57  E-value=2.3e-14  Score=149.43  Aligned_cols=123  Identities=17%  Similarity=0.138  Sum_probs=83.3

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      ...++||||++|.+|.+++...... ......++..++++ +..+|..|++|+|+||+|||++       .+|      .
T Consensus        69 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~-L~~lH~~giiHrDlkp~Nili~-------~~~------~  134 (325)
T cd05602          69 DKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASA-LGYLHSLNIVYRDLKPENILLD-------SQG------H  134 (325)
T ss_pred             CeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHHCCeEecCCCHHHeEEC-------CCC------C
Confidence            3458999999999999887542211 11122344444444 7889999999999999999998       667      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++..........     ........+.+.|.+.. .......|.|+++..+.+++.+
T Consensus       135 ~kl~DfG~a~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g  192 (325)
T cd05602         135 IVLTDFGLCKENIEHNGTT-----STFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYG  192 (325)
T ss_pred             EEEccCCCCcccccCCCCc-----ccccCCccccCHHHHcC-CCCCCccccccccHHHHHHhcC
Confidence            9999999987542211100     00112234566776643 3344567999999999999876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.56  E-value=3.4e-14  Score=147.83  Aligned_cols=190  Identities=17%  Similarity=0.063  Sum_probs=116.5

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||.|++|.||+|+.+.+       |+.||||+.+++... ...+.                                 
T Consensus         1 ~~lg~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~-~~~~~---------------------------------   39 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGK-------GEYFAVKALKKDVVL-IDDDV---------------------------------   39 (316)
T ss_pred             CeeeeCCCeEEEEEEECCC-------CCEEEEEEEEHHHhh-hcchH---------------------------------
Confidence            3589999999999999865       799999997653110 00000                                 


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                        -....|...+...    .+++  .+++.+..  .....++||||++|.+|.+++..... .......++..++.+ +.
T Consensus        40 --~~~~~e~~~l~~~----~~~~--~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~-l~  110 (316)
T cd05620          40 --ECTMVEKRVLALA----WENP--FLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCG-LQ  110 (316)
T ss_pred             --HHHHHHHHHHHhc----cCCC--CccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HH
Confidence              0011222222211    1122  22333322  22345799999999999988754221 111122333444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|+||+||+++       .+|      .++|+|||++..........     ........+.++|.+.. .
T Consensus       111 ~lH~~~ivHrDlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~  171 (316)
T cd05620         111 FLHSKGIIYRDLKLDNVMLD-------RDG------HIKIADFGMCKENVFGDNRA-----STFCGTPDYIAPEILQG-L  171 (316)
T ss_pred             HHHHCCeEecCCCHHHeEEC-------CCC------CEEeCccCCCeecccCCCce-----eccCCCcCccCHHHHcC-C
Confidence            89999999999999999998       667      89999999986432111100     01112234566776643 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ......|.|+++..+.+++.+.
T Consensus       172 ~~~~~~DiwslGvil~el~~g~  193 (316)
T cd05620         172 KYTFSVDWWSFGVLLYEMLIGQ  193 (316)
T ss_pred             CCCcccchhhhHHHHHHHHhCC
Confidence            3445679999999999998773

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=1.6e-14  Score=153.74  Aligned_cols=194  Identities=15%  Similarity=0.140  Sum_probs=118.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+....-  ...                        .+.+       
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~--~~~------------------------~~~~-------   45 (377)
T cd05629           6 VKVIGKGAFGEVRLVQKKDT-------GKIYAMKTLLKSE--MFK------------------------KDQL-------   45 (377)
T ss_pred             eEEEeecCCEEEEEEEECCC-------CCEEEEEEEEHHH--HHH------------------------hHHH-------
Confidence            47899999999999999875       7999999864310  000                        0000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|.+.+.++     ++++  +++.+..+  ....+|||||++|++|.+++...... ......++..++.+ +
T Consensus        46 ---~~~~~E~~il~~l-----~hp~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~a-L  114 (377)
T cd05629          46 ---AHVKAERDVLAES-----DSPW--VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLA-I  114 (377)
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--cceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               1123344333322     1222  23333222  23458999999999999987542211 11122233334433 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHH-HHHHH-----------------
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVN-LVEFF-----------------  507 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~-l~~l~-----------------  507 (581)
                      +.||..|++|+|+||.|||++       .+|      .++|+|||+++.+....... +..+.                 
T Consensus       115 ~~LH~~givHrDlkp~NIll~-------~~~------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (377)
T cd05629         115 EAVHKLGFIHRDIKPDNILID-------RGG------HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAV  181 (377)
T ss_pred             HHHHhCCeeccCCCHHHEEEC-------CCC------CEEEeeccccccccccccccccccccccccccccccccccccc
Confidence            889999999999999999998       667      89999999987543211100 00000                 


Q ss_pred             ----------------H--------HHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          508 ----------------K--------AVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       508 ----------------~--------Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                                      .        ..+-.-.+.+.|.+.. .......|.|+|++.+.+++.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG  244 (377)
T cd05629         182 DSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIMFECLIG  244 (377)
T ss_pred             ccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchhhhhhhcC
Confidence                            0        0111224667777643 3344578999999999999876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.56  E-value=2.3e-14  Score=149.44  Aligned_cols=123  Identities=18%  Similarity=0.135  Sum_probs=82.7

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      ...++||||++|++|.+++..... .......++..++.+ +..||..|++|+|+||+|||++       .+|      .
T Consensus        69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~a-l~~lH~~givH~Dlkp~NIll~-------~~~------~  134 (325)
T cd05604          69 EKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASA-LGYLHSINIVYRDLKPENILLD-------SQG------H  134 (325)
T ss_pred             CEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHCCeeecCCCHHHeEEC-------CCC------C
Confidence            456899999999999887754221 111222344444444 7889999999999999999998       677      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++..........     ........+.+.|.+.. .......|.++|+..+.+++.+
T Consensus       135 ~kL~DfG~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G  192 (325)
T cd05604         135 VVLTDFGLCKEGIAQSDTT-----TTFCGTPEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYG  192 (325)
T ss_pred             EEEeecCCcccCCCCCCCc-----ccccCChhhCCHHHHcC-CCCCCcCccccccceehhhhcC
Confidence            9999999987532211100     00112234556666543 3344567999999999998876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.56  E-value=2.7e-14  Score=148.72  Aligned_cols=189  Identities=19%  Similarity=0.139  Sum_probs=114.8

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||.|++|+||+|+.+.+       |+.||||+..+.....                              ..      
T Consensus         1 ~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~------------------------------~~------   37 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKAD-------GKFYAVKVLQKKAILK------------------------------KK------   37 (323)
T ss_pred             CeeeeCCCeEEEEEEECCC-------CCEEEEEEEEHHHHhh------------------------------hh------
Confidence            3589999999999999865       7999999865431000                              00      


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                      .+.++..|...+   .+.+ .+++  +++.+..  .....++||||++|.+|.+++..... .......++..++++ +.
T Consensus        38 ~~~~~~~e~~~~---~~~l-~hp~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~-l~  110 (323)
T cd05575          38 EQKHIMAERNVL---LKNV-KHPF--LVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASA-LG  110 (323)
T ss_pred             HHHHHHHHHHHH---HhhC-CCCC--CCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-HH
Confidence            001111222111   1111 1222  2222222  22345899999999999988754221 111122344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||+|||++       .+|      .++|+|||++..........     ........+.++|.+.. .
T Consensus       111 ~lH~~givH~dikp~NIll~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~  171 (323)
T cd05575         111 YLHSLNIIYRDLKPENILLD-------SQG------HVVLTDFGLCKEGIEHSKTT-----STFCGTPEYLAPEVLRK-Q  171 (323)
T ss_pred             HHHHCCeEeCCCCHHHeEEC-------CCC------cEEEeccCCCcccccCCCcc-----ccccCChhhcChhhhcC-C
Confidence            89999999999999999998       677      89999999987532211110     00111224556666543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.++|+..+.+++.+
T Consensus       172 ~~~~~~DvwslG~il~ell~g  192 (323)
T cd05575         172 PYDRTVDWWCLGAVLYEMLYG  192 (323)
T ss_pred             CCCccccccccchhhhhhhcC
Confidence            344567999999999998876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.56  E-value=2.6e-14  Score=149.74  Aligned_cols=191  Identities=17%  Similarity=0.105  Sum_probs=116.1

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|+||+|+.+.+       ++.||||+........                          .+.++       
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~--------------------------~~~~~-------   40 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKT-------ERIYAMKVVKKELVND--------------------------DEDID-------   40 (329)
T ss_pred             CeeeeCCCeEEEEEEECCC-------CCEEEEEEEEhhHhcc--------------------------hhHHH-------
Confidence            4689999999999999865       6899999976531100                          00000       


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKML  448 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L  448 (581)
                         .+..|...+.+.    .+++++.-...+.......++||||++|.+|.+++..... .......++..++.+ +..+
T Consensus        41 ---~~~~E~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~-l~~l  112 (329)
T cd05618          41 ---WVQTEKHVFEQA----SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA-LNYL  112 (329)
T ss_pred             ---HHHHHHHHHHhc----CCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHH
Confidence               012232222211    1223222111111223456899999999999887754221 112223344444444 7889


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|+||.||+++       .+|      .++|+|||++..........     ......-.+.++|.+.. ...
T Consensus       113 H~~~ivH~Dikp~Nili~-------~~~------~~kL~DfG~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~  173 (329)
T cd05618         113 HERGIIYRDLKLDNVLLD-------SEG------HIKLTDYGMCKEGLRPGDTT-----STFCGTPNYIAPEILRG-EDY  173 (329)
T ss_pred             HHCCeeeCCCCHHHEEEC-------CCC------CEEEeeCCccccccCCCCcc-----ccccCCccccCHHHHcC-CCC
Confidence            999999999999999998       677      89999999987532211100     00111223456666543 334


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.|+|+..+.+++.+
T Consensus       174 ~~~~DiwslG~il~el~~g  192 (329)
T cd05618         174 GFSVDWWALGVLMFEMMAG  192 (329)
T ss_pred             CCccceecccHHHHHHhhC
Confidence            4568999999999998876

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.55  E-value=1.4e-14  Score=150.95  Aligned_cols=188  Identities=15%  Similarity=0.080  Sum_probs=116.4

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|+||+|+.+.+       |+.||||+..+.....                          .+          
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-------~~~~a~K~~~~~~~~~--------------------------~~----------   37 (325)
T cd05594           1 KLLGKGTFGKVILVKEKAT-------GRYYAMKILKKEVIVA--------------------------KD----------   37 (325)
T ss_pred             CeeeeCCCEEEEEEEECCC-------CCEEEEEEEEHHHhhh--------------------------hh----------
Confidence            3589999999999998765       7999999975431000                          00          


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                      ....+.+|.+.+..+     .++++  ++.+.  ......+|||||++|.+|.+++..... .......++..++.+ +.
T Consensus        38 ~~~~~~~e~~~l~~~-----~hp~i--~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~a-L~  109 (325)
T cd05594          38 EVAHTLTENRVLQNS-----RHPFL--TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA-LD  109 (325)
T ss_pred             HHHHHHHHHHHHHhC-----CCCCC--CceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-HH
Confidence            001123344433322     12222  22222  223445899999999999888754221 111122334444443 78


Q ss_pred             Hhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          447 MLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       447 ~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      .||. .|++|+|+||.|||++       .+|      .++|+|||++..........     ........+.+.|.+.. 
T Consensus       110 ~lH~~~~ivHrDikp~NIll~-------~~~------~~kL~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-  170 (325)
T cd05594         110 YLHSEKNVVYRDLKLENLMLD-------KDG------HIKITDFGLCKEGIKDGATM-----KTFCGTPEYLAPEVLED-  170 (325)
T ss_pred             HHHhcCCEEecCCCCCeEEEC-------CCC------CEEEecCCCCeecCCCCccc-----ccccCCcccCCHHHHcc-
Confidence            8996 7999999999999998       677      89999999987532211110     01112234566676543 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+|+..+.+++.+
T Consensus       171 ~~~~~~~DiwslG~il~el~tG  192 (325)
T cd05594         171 NDYGRAVDWWGLGVVMYEMMCG  192 (325)
T ss_pred             CCCCCccccccccceeeeeccC
Confidence            3445577999999999888876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.55  E-value=1.6e-14  Score=150.70  Aligned_cols=188  Identities=14%  Similarity=0.063  Sum_probs=115.9

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|+.+.+       |+.||+|+.+......                          .+          
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~--------------------------~~----------   37 (323)
T cd05595           1 KLLGKGTFGKVILVREKAT-------GRYYAMKILRKEVIIA--------------------------KD----------   37 (323)
T ss_pred             CeeeeCCCEEEEEEEECCC-------CCEEEEEEEEHHHhhh--------------------------hH----------
Confidence            3589999999999998764       7999999976431100                          00          


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                      ...++.+|.+.+.++.     +++  +++.+.  ......+|||||++|.+|.+++..... .......++..++.+ +.
T Consensus        38 ~~~~~~~E~~~l~~l~-----hp~--i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~a-L~  109 (323)
T cd05595          38 EVAHTVTESRVLQNTR-----HPF--LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA-LE  109 (323)
T ss_pred             HHHHHHHHHHHHHhCC-----CCC--CcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HH
Confidence            0011233444443321     222  222221  223445799999999999887754221 112223344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||.|||++       .+|      .++|+|||++..........     ........+.+.|.+.. .
T Consensus       110 ~LH~~~ivH~Dlkp~NIll~-------~~~------~~kL~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~  170 (323)
T cd05595         110 YLHSRDVVYRDIKLENLMLD-------KDG------HIKITDFGLCKEGISDGATM-----KTFCGTPEYLAPEVLED-N  170 (323)
T ss_pred             HHHHCCeEecCCCHHHEEEc-------CCC------CEEecccHHhccccCCCCcc-----ccccCCcCcCCcccccC-C
Confidence            89999999999999999998       667      89999999887532211100     00111223455665532 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.++|+..+.+++.+
T Consensus       171 ~~~~~~DiwSlGvil~ell~g  191 (323)
T cd05595         171 DYGRAVDWWGLGVVMYEMMCG  191 (323)
T ss_pred             CCCchhchhhhHHHHHHHHhC
Confidence            344567999999999998876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.55  E-value=1.3e-14  Score=153.24  Aligned_cols=187  Identities=14%  Similarity=0.111  Sum_probs=114.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+......+..                                .   
T Consensus        79 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~--------------------------------~---  116 (353)
T PLN00034         79 VNRIGSGAGGTVYKVIHRPT-------GRLYALKVIYGNHEDTV--------------------------------R---  116 (353)
T ss_pred             hhhccCCCCeEEEEEEECCC-------CCEEEEEEEecCCcHHH--------------------------------H---
Confidence            46799999999999998764       69999999765421110                                0   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                         -++.+|.+.+.++.     ++++.-..-+.......++||||++|.+|.+...   ........++..++.+ +..|
T Consensus       117 ---~~~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~i~~qi~~a-L~~L  184 (353)
T PLN00034        117 ---RQICREIEILRDVN-----HPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI---ADEQFLADVARQILSG-IAYL  184 (353)
T ss_pred             ---HHHHHHHHHHHhCC-----CCCcceeeeEeccCCeEEEEEecCCCCccccccc---CCHHHHHHHHHHHHHH-HHHH
Confidence               12233444443321     2222111111222344579999999999875421   1111223355555544 7889


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh---h
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR---L  525 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~---l  525 (581)
                      |..|++|+|+||.|||++       .++      .++|+|||++..+.......     ........+.+.|.+..   .
T Consensus       185 H~~~ivHrDlkp~NIll~-------~~~------~~kL~DfG~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~  246 (353)
T PLN00034        185 HRRHIVHRDIKPSNLLIN-------SAK------NVKIADFGVSRILAQTMDPC-----NSSVGTIAYMSPERINTDLNH  246 (353)
T ss_pred             HHCCEeecCCCHHHEEEc-------CCC------CEEEcccccceecccccccc-----cccccCccccCcccccccccc
Confidence            999999999999999998       666      89999999987664322110     00111223445554421   1


Q ss_pred             cCC-CCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQ-QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~-~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. ....|.|+|+..+.+++.+
T Consensus       247 ~~~~~~~~DvwslGvil~el~~g  269 (353)
T PLN00034        247 GAYDGYAGDIWSLGVSILEFYLG  269 (353)
T ss_pred             CcCCCcchhHHHHHHHHHHHHhC
Confidence            111 2357999999999998876

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.55  E-value=3.4e-14  Score=147.72  Aligned_cols=123  Identities=18%  Similarity=0.139  Sum_probs=82.2

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      ...++||||++|.+|.+.+..... .......++..++.+ +..||..|++|+|+||.||+++       .+|      .
T Consensus        69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~-L~~lH~~~ivH~Dlkp~NIll~-------~~~------~  134 (321)
T cd05603          69 EKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASA-IGYLHSLNIIYRDLKPENILLD-------SQG------H  134 (321)
T ss_pred             CEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHCCeEeccCCHHHeEEC-------CCC------C
Confidence            345799999999999887754221 111122344444444 7889999999999999999998       677      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++..........     ........+.+.|.+.. .......|.|.|+..+.+++.+
T Consensus       135 ~kl~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g  192 (321)
T cd05603         135 VVLTDFGLCKEGVEPEETT-----STFCGTPEYLAPEVLRK-EPYDRTVDWWCLGAVLYEMLYG  192 (321)
T ss_pred             EEEccCCCCccCCCCCCcc-----ccccCCcccCCHHHhcC-CCCCCcCcccccchhhhhhhcC
Confidence            9999999987532211100     00112234566676543 3344567999999999998876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.55  E-value=3.6e-14  Score=148.51  Aligned_cols=188  Identities=18%  Similarity=0.094  Sum_probs=116.2

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|+.+.+       |+.||||+.++....    +                      .+.++       
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-------~~~~aiK~i~~~~~~----~----------------------~~~~~-------   40 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKT-------RRIYAMKVIKKELVN----D----------------------DEDID-------   40 (329)
T ss_pred             CeEeeCCCeEEEEEEECCC-------CCEEEEEEEEHHHhh----h----------------------hhHHH-------
Confidence            3589999999999999865       699999997653110    0                      00000       


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                         .+..|...+.++    .+++++  ++.+..  .....+|||||++|.+|.+++..... .......++..++.+ +.
T Consensus        41 ---~~~~e~~il~~~----~~hp~I--v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~-l~  110 (329)
T cd05588          41 ---WVQTEKHVFETA----SNHPFL--VGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLA-LN  110 (329)
T ss_pred             ---HHHHHHHHHHhc----cCCCCC--CceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-HH
Confidence               012233222222    123332  222222  23445899999999999888754221 112223344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc-CHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL-SKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L-~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      .+|..|++|+|+||+||+++       .+|      .++|+|||++... .......      .......+.++|.+.. 
T Consensus       111 ~lH~~~ivH~dlkp~Nili~-------~~~------~~kL~Dfg~~~~~~~~~~~~~------~~~gt~~y~aPE~~~~-  170 (329)
T cd05588         111 FLHERGIIYRDLKLDNVLLD-------AEG------HIKLTDYGMCKEGIRPGDTTS------TFCGTPNYIAPEILRG-  170 (329)
T ss_pred             HHHHCCeEecCCCHHHeEEC-------CCC------CEEECcCccccccccCCCccc------cccCCccccCHHHHcC-
Confidence            89999999999999999998       667      8999999998752 2111110      1112234556666543 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+|+..+.+++.+
T Consensus       171 ~~~~~~~DiwslG~~l~el~~g  192 (329)
T cd05588         171 EDYGFSVDWWALGVLMFEMMAG  192 (329)
T ss_pred             CCCCCccceechHHHHHHHHHC
Confidence            3344567999999999998876

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.55  E-value=3.1e-14  Score=146.39  Aligned_cols=198  Identities=20%  Similarity=0.212  Sum_probs=118.9

Q ss_pred             ceeecccceeEEEEEEeccCCC---------CCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          289 EAPVASGSIAQVHRASLRFRYP---------GQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~---------G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      .+.||+|++|.||+|+.....+         -....+..||||+.+++.....                           
T Consensus        10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~---------------------------   62 (304)
T cd05096          10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNA---------------------------   62 (304)
T ss_pred             eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHH---------------------------
Confidence            5679999999999998753100         0011256899999887632110                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch---------
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE---------  430 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~---------  430 (581)
                                 ..+|.+|.+.+.++.     ++++.-..-+.......++||||++|++|.+++.......         
T Consensus        63 -----------~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  126 (304)
T cd05096          63 -----------RNDFLKEVKILSRLK-----DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAV  126 (304)
T ss_pred             -----------HHHHHHHHHHHhhcC-----CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcccccccccccccc
Confidence                       123445555554432     2222211111122345689999999999999875421100         


Q ss_pred             -----------hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh
Q 008021          431 -----------RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD  499 (581)
Q Consensus       431 -----------~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~  499 (581)
                                 .....++..++.+ +..||..|++|+|+||.||+++       .++      .++|+|||++..+....
T Consensus       127 ~~~~~~~~~~~~~~~~i~~~i~~a-l~~lH~~~ivH~dlkp~Nill~-------~~~------~~kl~DfG~~~~~~~~~  192 (304)
T cd05096         127 PPAHCLPAISYSSLLHVALQIASG-MKYLSSLNFVHRDLATRNCLVG-------ENL------TIKIADFGMSRNLYAGD  192 (304)
T ss_pred             ccccccccccHHHHHHHHHHHHHH-HHHHHHCCccccCcchhheEEc-------CCc------cEEECCCccceecccCc
Confidence                       0112344444443 7889999999999999999998       666      89999999988664332


Q ss_pred             HHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          500 RVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       500 r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......   .......+.+.|.+.. +......|.++|+..+.+++..
T Consensus       193 ~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~  236 (304)
T cd05096         193 YYRIQG---RAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILML  236 (304)
T ss_pred             eeEecC---cCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHc
Confidence            110000   0000112445555433 4455567999999999988753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.55  E-value=5.1e-14  Score=148.50  Aligned_cols=203  Identities=16%  Similarity=0.121  Sum_probs=118.6

Q ss_pred             CCChhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccccccc
Q 008021          277 GRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWL  355 (581)
Q Consensus       277 G~~~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l  355 (581)
                      |...-.++..|. .+.||+|++|.||+|....+       ++.||||+........-.                      
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~~----------------------   59 (355)
T cd07874           9 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL-------DRNVAIKKLSRPFQNQTH----------------------   59 (355)
T ss_pred             CchhhhhhhceeEEEEeeecCCEEEEEEEecCC-------CceEEEEEeCCcccChHH----------------------
Confidence            333334455565 57999999999999998764       689999986543211000                      


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhH
Q 008021          356 RLDESVQQFAVFMMSQVDLAREA--AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLK  433 (581)
Q Consensus       356 ~l~e~v~ef~~~l~~ElDf~~Ea--~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~  433 (581)
                               .....+|+......  .|+.++...+       .+....+.....++||||++|. +.+.+... ......
T Consensus        60 ---------~~~~~~E~~~l~~l~h~niv~~~~~~-------~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~-l~~~~~  121 (355)
T cd07874          60 ---------AKRAYRELVLMKCVNHKNIISLLNVF-------TPQKSLEEFQDVYLVMELMDAN-LCQVIQME-LDHERM  121 (355)
T ss_pred             ---------HHHHHHHHHHHHHhCCCchhceeeee-------eccccccccceeEEEhhhhccc-HHHHHhhc-CCHHHH
Confidence                     00011121111111  1111111111       1110001112347999999885 44444321 111112


Q ss_pred             HHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh
Q 008021          434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR  513 (581)
Q Consensus       434 ~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~  513 (581)
                      ..++..++++ +..||..|++|+|+||+||+++       .+|      .++|+|||++..........      .....
T Consensus       122 ~~~~~qi~~a-L~~LH~~givHrDikp~Nill~-------~~~------~~kl~Dfg~~~~~~~~~~~~------~~~~t  181 (355)
T cd07874         122 SYLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVK-------SDC------TLKILDFGLARTAGTSFMMT------PYVVT  181 (355)
T ss_pred             HHHHHHHHHH-HHHHHhCCcccCCCChHHEEEC-------CCC------CEEEeeCcccccCCCccccC------Ccccc
Confidence            2344444444 7889999999999999999998       667      89999999998765432110      11223


Q ss_pred             cHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          514 DGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       514 D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..+.++|.+.. .......|.++|+..+.+++.+
T Consensus       182 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g  214 (355)
T cd07874         182 RYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRH  214 (355)
T ss_pred             CCccCHHHHcC-CCCCchhhHHHHHHHHHHHHhC
Confidence            45677777644 2344567999999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.55  E-value=8.9e-15  Score=152.50  Aligned_cols=131  Identities=18%  Similarity=0.232  Sum_probs=87.9

Q ss_pred             cEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeeccccccc-ccccCCCCe
Q 008021          407 AVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ-KRLFRSKPH  483 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~-~g~~~~~~~  483 (581)
                      -.+.|||++|++|.+++....+  ....-.......++. +..||.+||+|||+||.|||+.       . +|      .
T Consensus        91 ~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~G-L~ylHs~g~vH~DiK~~NiLl~-------~~~~------~  156 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEG-LAYLHSKGIVHCDIKPANILLD-------PSNG------D  156 (313)
T ss_pred             eEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHH-HHHHHhCCEeccCcccceEEEe-------CCCC------e
Confidence            4689999999999999976442  222223333333333 7889999999999999999999       5 56      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCC-CCCCHHHHHHHHHHhhhHhhccccHHHH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ-NCPNPKAFIEWMRLLPSGVLRRVIWSIL  557 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~-~~~D~~~f~~~l~~l~~~~~~~~~~~~l  557 (581)
                      ++|.|||++..+.......  .--....-.-.+-++|.+.. +... ...|.|+++|.+-|++++   +..|++.
T Consensus       157 ~KlaDFG~a~~~~~~~~~~--~~~~~~~Gtp~~maPEvi~~-g~~~~~~sDiWSlGCtVvEM~Tg---~~PW~~~  225 (313)
T KOG0198|consen  157 VKLADFGLAKKLESKGTKS--DSELSVQGTPNYMAPEVIRN-GEVARRESDIWSLGCTVVEMLTG---KPPWSEF  225 (313)
T ss_pred             EEeccCccccccccccccc--cccccccCCccccCchhhcC-CCcCCccchhhhcCCEEEeccCC---CCcchhh
Confidence            9999999999876400000  00000111233456677665 4333 378999999999999987   4555553

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=1.8e-14  Score=150.40  Aligned_cols=124  Identities=16%  Similarity=0.122  Sum_probs=83.9

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      ...++||||++|.+|.+++...... ......++..++.+ +..||..|++|+||||.|||++       .+|      .
T Consensus        69 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~a-l~~LH~~~ivHrDlkp~Nili~-------~~~------~  134 (330)
T cd05586          69 SDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLA-LEHLHKYDIVYRDLKPENILLD-------ATG------H  134 (330)
T ss_pred             CeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHHCCeEeccCCHHHeEEC-------CCC------C
Confidence            4468999999999998887542211 11122334444444 7889999999999999999998       667      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++..........     ........+.+.|.+..........|.|+++..+.+++.+
T Consensus       135 ~kl~Dfg~a~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG  193 (330)
T cd05586         135 IALCDFGLSKANLTDNKTT-----NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCG  193 (330)
T ss_pred             EEEecCCcCcCCCCCCCCc-----cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccC
Confidence            9999999987543221110     0111233567777775433345567999999888888766

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.54  E-value=1.5e-15  Score=144.09  Aligned_cols=204  Identities=16%  Similarity=0.167  Sum_probs=141.7

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|.+|.|++|+.+++       ++.||+|-.+-+                               +--+....+..
T Consensus         8 ekigegtygtvfkarn~~t-------~eivalkrvrld-------------------------------dddegvpssal   49 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNRET-------HEIVALKRVRLD-------------------------------DDDEGVPSSAL   49 (292)
T ss_pred             HhhcCCcceeeEecccCCc-------cceEEEEEEecc-------------------------------CCCCCCcHHHH
Confidence            5799999999999999987       799999965433                               22223334567


Q ss_pred             HHHHHHHHHH--HHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH---
Q 008021          370 SQVDLAREAA--HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---  444 (581)
Q Consensus       370 ~ElDf~~Ea~--nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~---  444 (581)
                      +|+-+..|.+  |+.|+.+....++.+             .||.|||+- .|..|.+...+.  ...++++..+-.+   
T Consensus        50 reicllkelkhknivrl~dvlhsdkkl-------------tlvfe~cdq-dlkkyfdslng~--~d~~~~rsfmlqllrg  113 (292)
T KOG0662|consen   50 REICLLKELKHKNIVRLHDVLHSDKKL-------------TLVFEFCDQ-DLKKYFDSLNGD--LDPEIVRSFMLQLLRG  113 (292)
T ss_pred             HHHHHHHHhhhcceeehhhhhccCcee-------------EEeHHHhhH-HHHHHHHhcCCc--CCHHHHHHHHHHHHhh
Confidence            7788888764  666666554444333             489999964 677777654332  2233333322222   


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +...|.+++.|||+||.|+++.       .+|      +++|.|||+++.+.-..|-     +.|-+-.-+++-.+.+..
T Consensus       114 l~fchshnvlhrdlkpqnllin-------~ng------elkladfglarafgipvrc-----ysaevvtlwyrppdvlfg  175 (292)
T KOG0662|consen  114 LGFCHSHNVLHRDLKPQNLLIN-------RNG------ELKLADFGLARAFGIPVRC-----YSAEVVTLWYRPPDVLFG  175 (292)
T ss_pred             hhhhhhhhhhhccCCcceEEec-------cCC------cEEecccchhhhcCCceEe-----eeceeeeeeccCcceeee
Confidence            4456789999999999999999       788      9999999998876543321     122223334566677777


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH---hhccccHHHHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG---VLRRVIWSILLSACSNYL  565 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~---~~~~~~~~~ll~~~~~~l  565 (581)
                      ..-+...+|+|.-.+.++|+...   .+...++.+.+..++.++
T Consensus       176 akly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~l  219 (292)
T KOG0662|consen  176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL  219 (292)
T ss_pred             eehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHh
Confidence            66777899999999999998755   477777777777777765

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.54  E-value=1.5e-14  Score=151.41  Aligned_cols=193  Identities=12%  Similarity=0.120  Sum_probs=116.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||||+....-         ...                     .      
T Consensus         6 ~~~lG~G~fg~V~~~~~~~~-------~~~~aiK~~~~~~---------~~~---------------------~------   42 (331)
T cd05624           6 IKVIGRGAFGEVAVVKMKHT-------ERIYAMKILNKWE---------MLK---------------------R------   42 (331)
T ss_pred             EEEEeeCCCeEEEEEEECCC-------CCEEEEEEEeHHH---------HHh---------------------h------
Confidence            47899999999999998764       6899999864310         000                     0      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                      .....+.+|...+...     ..+.+....-+.......+|||||++|++|.+++.....  .......++..++. .++
T Consensus        43 ~~~~~~~~e~~~l~~~-----~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~-~L~  116 (331)
T cd05624          43 AETACFREERNVLVNG-----DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVL-AIH  116 (331)
T ss_pred             HHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH-HHH
Confidence            0001122232222211     122221111111122345799999999999999865221  11122233333443 378


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh-
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL-  525 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l-  525 (581)
                      .+|..|++|+|+||+|||++       .+|      .++|+|||++..+.........    .....-.+.+.|.+... 
T Consensus       117 ~lH~~~iiHrDlkp~Nill~-------~~~------~~kl~DfG~a~~~~~~~~~~~~----~~~gt~~y~aPE~~~~~~  179 (331)
T cd05624         117 SIHQLHYVHRDIKPDNVLLD-------MNG------HIRLADFGSCLKMNQDGTVQSS----VAVGTPDYISPEILQAME  179 (331)
T ss_pred             HHHHCCeeeccCchHHEEEc-------CCC------CEEEEeccceeeccCCCceeec----cccCCcccCCHHHHhccc
Confidence            89999999999999999998       666      8999999998876543221100    00112235566665432 


Q ss_pred             ---cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 ---SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ---~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                         +......|.|+|+..+.+++.+
T Consensus       180 ~~~~~~~~~~DiwSlGvil~ell~g  204 (331)
T cd05624         180 DGMGKYGPECDWWSLGVCMYEMLYG  204 (331)
T ss_pred             cCCCCCCCcccEEeeehhhhhhhhC
Confidence               2334567999999999888876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.54  E-value=1.8e-14  Score=150.21  Aligned_cols=191  Identities=18%  Similarity=0.149  Sum_probs=118.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+.....    +                      .+.        
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~~~----~----------------------~~~--------   44 (330)
T cd05601           6 KSLVGRGHFGEVQVVREKAT-------GDIYAMKVMKKSVLL----A----------------------QET--------   44 (330)
T ss_pred             EEEEEeccCEEEEEEEECCC-------CCEEEEEEEEHHHhh----h----------------------hhH--------
Confidence            57899999999999999865       799999986542100    0                      000        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        +-.+..|...+...     .++.  +++.+..  .....+|||||++|.+|.+++.....  .......++..++.+ 
T Consensus        45 --~~~~~~e~~i~~~~-----~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~a-  114 (330)
T cd05601          45 --VSFFEEERDILSIS-----NSPW--IPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLA-  114 (330)
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--CcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHH-
Confidence              01122233322221     1222  2233222  23446899999999999999865311  111122233334433 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||.||+++       .+|      .++|+|||++..+.......-    ........+.++|.+..
T Consensus       115 L~~lH~~~i~H~Dlkp~NIll~-------~~~------~~kL~Dfg~a~~~~~~~~~~~----~~~~gt~~y~aPE~~~~  177 (330)
T cd05601         115 IHSVHQMGYVHRDIKPENVLID-------RTG------HIKLADFGSAARLTANKMVNS----KLPVGTPDYIAPEVLTT  177 (330)
T ss_pred             HHHHHHCCeEcccCchHheEEC-------CCC------CEEeccCCCCeECCCCCceee----ecccCCccccCHHHhcc
Confidence            7889999999999999999998       677      899999999987654322110    00011224566776653


Q ss_pred             h-----cCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 L-----SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l-----~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .     .......|.|+|+..+.+++.+
T Consensus       178 ~~~~~~~~~~~~~DiwslG~il~el~~g  205 (330)
T cd05601         178 MNGDGKGTYGVECDWWSLGVIAYEMIYG  205 (330)
T ss_pred             ccccccCCCCCcceeecccceeeeeccC
Confidence            2     2233456899998888888766

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.54  E-value=3.1e-14  Score=148.46  Aligned_cols=192  Identities=18%  Similarity=0.118  Sum_probs=116.0

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|+.....    ..|+.||||+.+....   ..+                                ..
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~----~~~~~~avK~~~~~~~---~~~--------------------------------~~   42 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGA----DTGKIFAMKVLKKATI---VRN--------------------------------QK   42 (323)
T ss_pred             ceeeecCCeEEEEEEEcccC----CCCCEEEEEEEEHHHH---Hhh--------------------------------hh
Confidence            57999999999999875311    1268999998653200   000                                00


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l~  446 (581)
                      ....+.+|...+.++.     ++++  ++.+..  .....++||||++|.+|.+++...... ......++..++.+ +.
T Consensus        43 ~~~~~~~E~~il~~l~-----hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~-l~  114 (323)
T cd05584          43 DTAHTKAERNILEAVK-----HPFI--VDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLA-LE  114 (323)
T ss_pred             hHHHHHHHHHHHHhCC-----CCch--hceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHH-HH
Confidence            1112334544444331     2222  222222  223457999999999999887542211 11112233333333 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||.|||++       .+|      .++|+|||++..........     ......-.+.++|.+.. .
T Consensus       115 ~lH~~~ivH~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~  175 (323)
T cd05584         115 HLHQQGIIYRDLKPENILLD-------AQG------HVKLTDFGLCKESIHEGTVT-----HTFCGTIEYMAPEILMR-S  175 (323)
T ss_pred             HHHHCCeecCCCCHHHeEEC-------CCC------CEEEeeCcCCeecccCCCcc-----cccCCCccccChhhccC-C
Confidence            89999999999999999998       667      89999999987542221110     00111223566666543 2


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.++|+..+.+++.+
T Consensus       176 ~~~~~~DiwslG~il~ell~G  196 (323)
T cd05584         176 GHGKAVDWWSLGALMYDMLTG  196 (323)
T ss_pred             CCCCcceecccHHHHHHHhcC
Confidence            334567999999999998876

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.54  E-value=1.3e-14  Score=145.92  Aligned_cols=188  Identities=13%  Similarity=0.106  Sum_probs=123.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.||||.|||+....+       |..||.|-.+=+.                               +-+.-+..+
T Consensus        24 l~~IG~GsFg~vykv~~~~~-------g~l~a~K~i~f~~-------------------------------md~k~rq~~   65 (375)
T KOG0591|consen   24 LKKIGRGSFGEVYKVQCLLD-------GKLVALKKIQFGM-------------------------------MDAKARQDC   65 (375)
T ss_pred             HHHHcCCcchheEEeeeccC-------cchhhhhhcchhh-------------------------------ccHHHHHHH
Confidence            56799999999999999875       6999998433221                               111122334


Q ss_pred             HHHHHHHHHHH--HHHHHHH-hcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch-hhH-HHHHHHHHHH
Q 008021          369 MSQVDLAREAA--HLSRFIY-NFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE-RLK-SALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~--nl~rf~~-~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~-~~~-~~la~~~i~a  443 (581)
                      ..|+++.+..+  |+.++.. .|.+...|.            .|||||++++.|++.++.-.... ..+ ..+....++.
T Consensus        66 v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl------------nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL  133 (375)
T KOG0591|consen   66 VKEISLLKQLNHPNIVQYYAHSFIEDNEVL------------NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQL  133 (375)
T ss_pred             HHHHHHHHhcCCchHHHHHHHhhhccchhh------------HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHH
Confidence            55666665543  6666654 443333311            28999999999999986533221 111 2222222221


Q ss_pred             --HHHHhhh--CC--eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          444 --LLKMLLV--DN--FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       444 --~l~~L~~--~G--~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                        .+..+|.  ..  ++|||+||+||+++       .+|      .++|-|||+.+.++.+..-     -.+++-.-++-
T Consensus       134 ~~AL~~cH~~~~r~~VmHRDIKPaNIFl~-------~~g------vvKLGDfGL~r~l~s~~tf-----A~S~VGTPyYM  195 (375)
T KOG0591|consen  134 CRALYHCHSKIPRGTVMHRDIKPANIFLT-------ANG------VVKLGDFGLGRFLSSKTTF-----AHSLVGTPYYM  195 (375)
T ss_pred             HHHHHHHhccccccceeeccCcchheEEc-------CCC------ceeeccchhHhHhcchhHH-----HHhhcCCCccc
Confidence              1444554  44  99999999999999       777      8999999999998776432     24455556666


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhh
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLP  545 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~  545 (581)
                      -+|.+.+ ..+....|.|+++|.+.|+.
T Consensus       196 SPE~i~~-~~Y~~kSDiWslGCllyEMc  222 (375)
T KOG0591|consen  196 SPERIHE-SGYNFKSDIWSLGCLLYEMC  222 (375)
T ss_pred             CHHHHhc-CCCCcchhHHHHHHHHHHHH
Confidence            6666655 44556779999999888864

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.54  E-value=2.2e-14  Score=152.96  Aligned_cols=194  Identities=14%  Similarity=0.114  Sum_probs=119.8

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||.|++|.||+|+.+.+       |+.||||+....-       +                        ... 
T Consensus        44 ~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~-------~------------------------~~~-   84 (370)
T cd05596          44 DFDVIKVIGRGAFGEVQLVRHKSS-------KQVYAMKLLSKFE-------M------------------------IKR-   84 (370)
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCC-------CCEEEEEEEEHHH-------h------------------------hhh-
Confidence            344 57899999999999999865       7999999864310       0                        000 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH  442 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~  442 (581)
                          ...-.+.+|...+..+     ++++  +++.+.  ......++||||++|++|.+++............++..++.
T Consensus        85 ----~~~~~~~~e~~il~~~-----~h~~--iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~  153 (370)
T cd05596          85 ----SDSAFFWEERDIMAHA-----NSEW--IVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVL  153 (370)
T ss_pred             ----hhHHHHHHHHHHHHhC-----CCCC--cceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHH
Confidence                0001122333333222     1222  222222  12234579999999999999886532222222333334444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..||..|++|+|+||.|||++       .+|      .++|+|||++..+........    ........+.++|.+
T Consensus       154 a-L~~LH~~~ivHrDLkp~NILl~-------~~~------~~kL~DfG~~~~~~~~~~~~~----~~~~gt~~y~aPE~~  215 (370)
T cd05596         154 A-LDAIHSMGFIHRDVKPDNMLLD-------KSG------HLKLADFGTCMKMDANGMVRC----DTAVGTPDYISPEVL  215 (370)
T ss_pred             H-HHHHHHCCeeccCCCHHHEEEc-------CCC------CEEEEeccceeeccCCCcccC----CCCCCCcCeECHHHh
Confidence            3 7889999999999999999998       677      899999999887654321100    000112235566766


Q ss_pred             Hhhc---CCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLS---KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~---~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....   ......|.|+|+..+.+++.+
T Consensus       216 ~~~~~~~~~~~~~DiwSlGvilyelltG  243 (370)
T cd05596         216 KSQGGDGYYGRECDWWSVGVFLYEMLVG  243 (370)
T ss_pred             ccCCCCCCCCCceeeeehhHHHHHHHhC
Confidence            5432   234567999999999998876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.54  E-value=1.3e-14  Score=155.27  Aligned_cols=192  Identities=20%  Similarity=0.243  Sum_probs=127.0

Q ss_pred             ChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       279 ~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      ++..+|.-|.++.+|||-||.||-|+.+.+       |++|||||+..-                    .+|.       
T Consensus       559 d~stvYQif~devLGSGQFG~VYgg~hRkt-------GrdVAvKvIdKl--------------------rFp~-------  604 (888)
T KOG4236|consen  559 DISTVYQIFADEVLGSGQFGTVYGGKHRKT-------GRDVAVKVIDKL--------------------RFPT-------  604 (888)
T ss_pred             hHHHHHHhhhHhhccCCcceeeecceeccc-------Cceeeeeeeecc--------------------cCCC-------
Confidence            456778888899999999999999999987       799999985321                    2332       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHH
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSAL  436 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~l  436 (581)
                                .+|-.+++|.+-++.+     .+++|.--.-..+-..+-..|||-+.|..|.-++....+.  .+..+-+
T Consensus       605 ----------kqesqlR~EVaILq~l-----~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFl  669 (888)
T KOG4236|consen  605 ----------KQESQLRNEVAILQNL-----HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFL  669 (888)
T ss_pred             ----------chHHHHHHHHHHHHhc-----CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHH
Confidence                      2344456676665543     2344433222222223335799999998888776543222  1222223


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh-HHHHHHHHHHHHhhcH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD-RVNLVEFFKAVARRDG  515 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~-r~~l~~l~~Al~~~D~  515 (581)
                      ..+++ ..|+.||..||+|+||||.|||+.-..          .=|+++|+|||.++.+.+.. |+.       ++-.-.
T Consensus       670 vtQIL-~ALr~LH~knIvHCDLKPENVLLas~~----------~FPQvKlCDFGfARiIgEksFRrs-------VVGTPA  731 (888)
T KOG4236|consen  670 VTQIL-VALRYLHFKNIVHCDLKPENVLLASAS----------PFPQVKLCDFGFARIIGEKSFRRS-------VVGTPA  731 (888)
T ss_pred             HHHHH-HHHHHhhhcceeeccCCchheeeccCC----------CCCceeeccccceeecchhhhhhh-------hcCCcc
Confidence            33333 348889999999999999999998221          23599999999999998753 433       345556


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHH
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFI  538 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~  538 (581)
                      |.+.|.+..-|.. ...|+|...
T Consensus       732 YLaPEVLrnkGyN-rSLDMWSVG  753 (888)
T KOG4236|consen  732 YLAPEVLRNKGYN-RSLDMWSVG  753 (888)
T ss_pred             ccCHHHHhhcccc-ccccceeee
Confidence            6777777665544 466777554

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.54  E-value=3.9e-14  Score=143.93  Aligned_cols=191  Identities=15%  Similarity=0.128  Sum_probs=116.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||||+........                               +....+
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~-------~~~~avK~~~~~~~~~-------------------------------~~~~~~   47 (287)
T cd07848           6 LGVVGEGAYGVVLKCRHKET-------KEIVAIKKFKDSEENE-------------------------------EVKETT   47 (287)
T ss_pred             EEEecccCCEEEEEEEECCC-------CcEEEEEEEecccccc-------------------------------cchhhH
Confidence            46799999999999999865       7999999876431100                               000011


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                            .+|...+.++.     ++++.-..-+.......++||||++|..+..+...... .......++..++.+ +..
T Consensus        48 ------~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~-L~~  115 (287)
T cd07848          48 ------LRELKMLRTLK-----QENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKA-IHW  115 (287)
T ss_pred             ------HHHHHHHHhCC-----CccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHH
Confidence                  12222222211     11111000011122345799999999887765432111 111122344444443 778


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      +|..|++|+|+||+||+++       .++      .++|+|||++..+.........    .......+.+.|.+.. ..
T Consensus       116 lH~~~i~H~dlkp~Nill~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~-~~  177 (287)
T cd07848         116 CHKNDIVHRDIKPENLLIS-------HND------VLKLCDFGFARNLSEGSNANYT----EYVATRWYRSPELLLG-AP  177 (287)
T ss_pred             HHHCCeecCCCCHHHEEEc-------CCC------cEEEeeccCccccccccccccc----ccccccccCCcHHHcC-CC
Confidence            9999999999999999998       666      8999999999877543322211    1112334566776643 33


Q ss_pred             CCCCCCHHHHHHHHHHhhhH
Q 008021          528 QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....|.|+|+..+.+++.+
T Consensus       178 ~~~~~DiwslGvil~el~~g  197 (287)
T cd07848         178 YGKAVDMWSVGCILGELSDG  197 (287)
T ss_pred             CCCchhHHhHHHHHHHHHhC
Confidence            45578999999999999877

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.54  E-value=1.4e-14  Score=149.09  Aligned_cols=189  Identities=17%  Similarity=0.192  Sum_probs=115.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+       |+.||||+.+......                                     
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~-------------------------------------   45 (303)
T cd07869          10 LEKLGEGSYATVYKGKSKVN-------GKLVALKVIRLQEEEG-------------------------------------   45 (303)
T ss_pred             eeeEEecCCEEEEEEEECCC-------CCEEEEEEeccccccc-------------------------------------
Confidence            57899999999999999764       6999999865321100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                       .+..+.+|+..+.++     +++++.-..-+.......++||||++| ++.+++.....  .......++..++.+ +.
T Consensus        46 -~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~a-l~  117 (303)
T cd07869          46 -TPFTAIREASLLKGL-----KHANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRG-LS  117 (303)
T ss_pred             -cchhHHHHHHHHhhC-----CCCCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHH-HH
Confidence             001122344433332     122322111122223456899999976 45555433211  111123344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|+||+|||++       .+|      .++|+|||++...+......     ......-.+.++|.+....
T Consensus       118 ~lH~~~ivH~dlkp~Nill~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~  179 (303)
T cd07869         118 YIHQRYILHRDLKPQNLLIS-------DTG------ELKLADFGLARAKSVPSHTY-----SNEVVTLWYRPPDVLLGST  179 (303)
T ss_pred             HHHHCCeecCCCCHHHEEEC-------CCC------CEEECCCCcceeccCCCccC-----CCCcccCCCCChHHHcCCC
Confidence            89999999999999999998       666      89999999987543221100     0001123456677765544


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.|+++..+.+++.+
T Consensus       180 ~~~~~~DiwslG~il~~l~~g  200 (303)
T cd07869         180 EYSTCLDMWGVGCIFVEMIQG  200 (303)
T ss_pred             CCCcHHHHHHHHHHHHHHHhC
Confidence            455567999999999998876

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.54  E-value=5.2e-14  Score=148.55  Aligned_cols=192  Identities=14%  Similarity=0.092  Sum_probs=121.7

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      +++|+ .+.||+|++|.||+|+.+.+  +    +..||||+.......  .                        .+.+ 
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~--~----~~~vavK~~~~~~~~--~------------------------~~~~-   75 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNE--D----FPPVAIKRFEKSKII--K------------------------QKQV-   75 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECC--C----CeEEEEEEEEHHHhh--h------------------------hhhH-
Confidence            33444 57899999999999997653  1    478999975421000  0                        0000 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHI  439 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~  439 (581)
                               -.+.+|...+..+.     ++++  ++.+..  .....++||||++|++|.+++..... .......++..
T Consensus        76 ---------~~~~~E~~~l~~l~-----hp~I--v~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~q  139 (340)
T PTZ00426         76 ---------DHVFSERKILNYIN-----HPFC--VNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQ  139 (340)
T ss_pred             ---------HHHHHHHHHHHhCC-----CCCC--cceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHH
Confidence                     12334544444331     2222  222221  22345799999999999998864322 11122334444


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      ++.+ +..+|..|++|+|+||+|||++       .+|      .++|+|||++..++.....        ......+.++
T Consensus       140 i~~a-L~~LH~~~ivHrDLkp~NILl~-------~~~------~ikL~DFG~a~~~~~~~~~--------~~gt~~y~aP  197 (340)
T PTZ00426        140 IVLI-FEYLQSLNIVYRDLKPENLLLD-------KDG------FIKMTDFGFAKVVDTRTYT--------LCGTPEYIAP  197 (340)
T ss_pred             HHHH-HHHHHHCCeEccCCCHHHEEEC-------CCC------CEEEecCCCCeecCCCcce--------ecCChhhcCH
Confidence            4443 7889999999999999999998       677      8999999999876543211        1122346677


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+.. .......|.|+|+..+.+++.+
T Consensus       198 E~~~~-~~~~~~~DiwSlGvil~ell~G  224 (340)
T PTZ00426        198 EILLN-VGHGKAADWWTLGIFIYEILVG  224 (340)
T ss_pred             HHHhC-CCCCccccccchhhHHHHHhcC
Confidence            77654 3344567999999999999876

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.54  E-value=4.2e-14  Score=147.87  Aligned_cols=189  Identities=19%  Similarity=0.097  Sum_probs=116.5

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|+||+|+.+.+       ++.||||+.+.....    +                      .+.++       
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~----~----------------------~~~~~-------   40 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKN-------DQIYAMKVVKKELVH----D----------------------DEDID-------   40 (327)
T ss_pred             CeeeeCCCeEEEEEEECCC-------CCEEEEEEEEHHHhh----h----------------------hhHHH-------
Confidence            3689999999999999864       699999997653110    0                      00000       


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                         .+.+|...+.+.    ..++.  ++..+.  ......++||||++|.+|.+++..... .......++..++.+ +.
T Consensus        41 ---~~~~e~~~~~~~----~~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~a-l~  110 (327)
T cd05617          41 ---WVQTEKHVFEQA----SSNPF--LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIA-LN  110 (327)
T ss_pred             ---HHHHHHHHHHhh----cCCCC--EeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HH
Confidence               122333333222    12222  222222  223445799999999999887754221 112223344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|+||.|||++       .+|      .++|+|||++..........     ......-.+.++|.+.. .
T Consensus       111 ~lH~~~ivHrDlkp~Nili~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~  171 (327)
T cd05617         111 FLHERGIIYRDLKLDNVLLD-------ADG------HIKLTDYGMCKEGLGPGDTT-----STFCGTPNYIAPEILRG-E  171 (327)
T ss_pred             HHHHCCeeccCCCHHHEEEe-------CCC------CEEEeccccceeccCCCCce-----ecccCCcccCCHHHHCC-C
Confidence            89999999999999999998       667      89999999987532111100     00111223456666543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.|+|+..+.+++.+
T Consensus       172 ~~~~~~DiwslGvil~ell~g  192 (327)
T cd05617         172 EYGFSVDWWALGVLMFEMMAG  192 (327)
T ss_pred             CCCchheeehhHHHHHHHHhC
Confidence            344567999999999998876

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.54  E-value=4.8e-14  Score=145.55  Aligned_cols=190  Identities=15%  Similarity=0.114  Sum_probs=116.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||||+.+.......                                    
T Consensus        11 ~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~~------------------------------------   47 (309)
T cd07872          11 LEKLGEGTYATVFKGRSKLT-------ENLVALKEIRLEHEEGA------------------------------------   47 (309)
T ss_pred             EEEecccCCEEEEEEEecCC-------CCeEEEEEeeccccCCc------------------------------------
Confidence            57899999999999998764       68999998754321100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                        +..+.+|...+.++.     ++++.-..-+.......++||||++| ++.+++.....  .......++..++.+ +.
T Consensus        48 --~~~~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~a-L~  118 (309)
T cd07872          48 --PCTAIREVSLLKDLK-----HANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRG-LA  118 (309)
T ss_pred             --chhHHHHHHHHHhCC-----CCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH-HH
Confidence              011223444443331     22222111111123456899999987 67766643221  111122344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|+||+||+++       .++      .++|+|||++...........     .....-.+.++|.+....
T Consensus       119 ~lH~~~ivH~dlkp~Nill~-------~~~------~~kl~Dfg~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~  180 (309)
T cd07872         119 YCHRRKVLHRDLKPQNLLIN-------ERG------ELKLADFGLARAKSVPTKTYS-----NEVVTLWYRPPDVLLGSS  180 (309)
T ss_pred             HHHHCCeecCCCCHHHEEEC-------CCC------CEEECccccceecCCCccccc-----cccccccccCCHHHhCCC
Confidence            89999999999999999998       666      899999999875433221100     001123455666665444


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ......|.++|+..+.+++++.
T Consensus       181 ~~~~~~DiwslG~il~el~tg~  202 (309)
T cd07872         181 EYSTQIDMWGVGCIFFEMASGR  202 (309)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCC
Confidence            4455679999999999998873

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.54  E-value=4.2e-14  Score=145.45  Aligned_cols=185  Identities=18%  Similarity=0.127  Sum_probs=113.5

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      ..||+|++|+||+|+...+       |+.||||+.+-....                                       
T Consensus        26 ~~lg~g~~g~v~~~~~~~~-------~~~v~iK~~~~~~~~---------------------------------------   59 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSS-------GKLVAVKKMDLRKQQ---------------------------------------   59 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCC-------CeEEEEEEecccchh---------------------------------------
Confidence            4699999999999999764       799999975322100                                       


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKM  447 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~  447 (581)
                      .+-++.+|...+.++.     ++++  ++.+.  ......++||||++|.+|.+++............++..++.+ +..
T Consensus        60 ~~~~~~~e~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~-l~~  131 (292)
T cd06657          60 RRELLFNEVVIMRDYQ-----HENV--VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKA-LSV  131 (292)
T ss_pred             HHHHHHHHHHHHHhcC-----Ccch--hheeeEEEeCCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHH-HHH
Confidence            0112333333332221     1111  11111  122345799999999999998754222222223344444443 788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      +|..|++|+|++|.||+++       .++      .++|+|||++..+..+....-     .......+.+.|.+. -..
T Consensus       132 lH~~givH~dl~p~Nilv~-------~~~------~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~y~~pE~~~-~~~  192 (292)
T cd06657         132 LHAQGVIHRDIKSDSILLT-------HDG------RVKLSDFGFCAQVSKEVPRRK-----SLVGTPYWMAPELIS-RLP  192 (292)
T ss_pred             HHHCCeecCCCCHHHEEEC-------CCC------CEEEcccccceeccccccccc-----ccccCccccCHHHhc-CCC
Confidence            9999999999999999998       666      899999999876654322110     011112344555442 233


Q ss_pred             CCCCCCHHHHHHHHHHhhhH
Q 008021          528 QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....|.++|+..+.+++++
T Consensus       193 ~~~~~Dv~slGvil~el~tg  212 (292)
T cd06657         193 YGPEVDIWSLGIMVIEMVDG  212 (292)
T ss_pred             CCchhhHHHHHHHHHHHHhC
Confidence            34466888888888888865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.53  E-value=3.5e-14  Score=150.94  Aligned_cols=123  Identities=15%  Similarity=0.097  Sum_probs=81.4

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ..++||||+++ ++.+++..... .......++..++.+ +..||..|++|+|+||.|||++       .++      .+
T Consensus        78 ~~~lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~a-L~~LH~~~ivH~dlkp~Nili~-------~~~------~~  142 (372)
T cd07853          78 EIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRG-LKYLHSAGILHRDIKPGNLLVN-------SNC------VL  142 (372)
T ss_pred             eEEEEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHH-HHHHHhCCeeCCCCChHHEEEC-------CCC------CE
Confidence            34799999976 56665533211 111123344444444 7889999999999999999998       667      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++............    .......+.+.|.+..-.......|.|+|+..+.+++.+
T Consensus       143 kL~Dfg~a~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  201 (372)
T cd07853         143 KICDFGLARVEEPDESKHMT----QEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGR  201 (372)
T ss_pred             EeccccceeecccCccccCC----CCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcC
Confidence            99999998765433211110    011233466777765433345567999999999999877

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.53  E-value=1.2e-13  Score=140.55  Aligned_cols=121  Identities=17%  Similarity=0.125  Sum_probs=83.3

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK  481 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~  481 (581)
                      ..-++||||++| ++.+++......   ......++..++.+ +..+|..|++|+|+||.|||++       .+|     
T Consensus        82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~a-L~~lH~~~iiH~dlkp~Nil~~-------~~~-----  147 (290)
T cd07862          82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG-LDFLHSHRVVHRDLKPQNILVT-------SSG-----  147 (290)
T ss_pred             CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHH-HHHHHHCCeeeCCCCHHHEEEc-------CCC-----
Confidence            345899999986 787777542211   11223344444444 7889999999999999999998       667     


Q ss_pred             CeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       482 ~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .++|+|||++...+.....      ........+.++|.+.. .......|.++|+..+.+++.+
T Consensus       148 -~~kl~Dfg~~~~~~~~~~~------~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g  205 (290)
T cd07862         148 -QIKLADFGLARIYSFQMAL------TSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRR  205 (290)
T ss_pred             -CEEEccccceEeccCCccc------ccccccccccChHHHhC-CCCCCccchHHHHHHHHHHHcC
Confidence             8999999998766543111      11112334567777644 3444567999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.53  E-value=4.6e-14  Score=146.75  Aligned_cols=193  Identities=16%  Similarity=0.107  Sum_probs=118.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......                                     
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~-------------------------------------   40 (338)
T cd07859           5 QEVIGKGSYGVVCSAIDTHT-------GEKVAIKKINDVFEHV-------------------------------------   40 (338)
T ss_pred             EEEEeecCCeEEEEEEECCC-------CCEEEEEEechhhccc-------------------------------------
Confidence            46799999999999998765       6999999865321100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-ccccccc----CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYP----LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~----l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~  442 (581)
                      .....+.+|.+.+.++.     ++++. +...+..    ....-++||||++| +|.+++..... .......++..++.
T Consensus        41 ~~~~~~~~E~~~l~~l~-----hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~  114 (338)
T cd07859          41 SDATRILREIKLLRLLR-----HPDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHHQFFLYQLLR  114 (338)
T ss_pred             hhHHHHHHHHHHHHhCC-----CCCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHHhcccCCHHHHHHHHHHHHH
Confidence            00112334555444432     22211 1111110    01234799999965 77777654221 11222334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..||..|++|+|+||.|||++       .+|      .++|+|||++..........  ..+........+.++|.+
T Consensus       115 a-L~~LH~~~ivH~dlkp~NIll~-------~~~------~~kL~Dfg~~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~  178 (338)
T cd07859         115 A-LKYIHTANVFHRDLKPKNILAN-------ADC------KLKICDFGLARVAFNDTPTA--IFWTDYVATRWYRAPELC  178 (338)
T ss_pred             H-HHHHHHCCeecCCCCHHHeEEC-------CCC------cEEEccCccccccccccCcc--ccccCCCCCCCcCCHHHH
Confidence            4 7889999999999999999998       677      89999999987653321111  111111223345677766


Q ss_pred             Hhh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ... .......|.|+|+..+.+++.+
T Consensus       179 ~~~~~~~~~~~DvwSlGvvl~el~tg  204 (338)
T cd07859         179 GSFFSKYTPAIDIWSIGCIFAEVLTG  204 (338)
T ss_pred             hccccccCchhHHHHHHHHHHHHHcC
Confidence            543 3445567999999999999876

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.53  E-value=1e-13  Score=140.28  Aligned_cols=193  Identities=18%  Similarity=0.129  Sum_probs=116.4

Q ss_pred             hhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          281 SEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       281 ~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      .+.|..  .+.||+|++|.||+|.+..+       |+.||||+.........                            
T Consensus         3 ~~~y~~--~~~l~~g~~~~vy~~~~~~~-------~~~vaiK~~~~~~~~~~----------------------------   45 (277)
T cd06642           3 EELFTK--LERIGKGSFGEVYKGIDNRT-------KEVVAIKIIDLEEAEDE----------------------------   45 (277)
T ss_pred             HHHHHH--HHHhcCCCCeeEEEEEEcCC-------CeEEEEEEeccccchHH----------------------------
Confidence            444543  35699999999999998764       68999998653311100                            


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH  438 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~  438 (581)
                      .          -++.+|...+.++     +++++  ++.+.  ......++||||++|.+|.+++............++.
T Consensus        46 ~----------~~~~~e~~~l~~l-----~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  108 (277)
T cd06642          46 I----------EDIQQEITVLSQC-----DSPYI--TRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR  108 (277)
T ss_pred             H----------HHHHHHHHHHHcC-----CCCcc--HhhhcccccCCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHH
Confidence            0          1223344333322     11221  11221  1223457999999999999987542222222233444


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++++ +..+|..|++|+|++|+||+++       .++      .+++.|||++..+.......-     .......+.+
T Consensus       109 ~i~~~-l~~lH~~~ivH~dl~p~ni~i~-------~~~------~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~y~a  169 (277)
T cd06642         109 EILKG-LDYLHSERKIHRDIKAANVLLS-------EQG------DVKLADFGVAGQLTDTQIKRN-----TFVGTPFWMA  169 (277)
T ss_pred             HHHHH-HHHHhcCCeeccCCChheEEEe-------CCC------CEEEccccccccccCcchhhh-----cccCcccccC
Confidence            44444 6788999999999999999998       666      899999999987765432110     0011123344


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .|.+.. .......|.++|+..+.+++.+
T Consensus       170 PE~~~~-~~~~~~~Dv~slG~il~el~tg  197 (277)
T cd06642         170 PEVIKQ-SAYDFKADIWSLGITAIELAKG  197 (277)
T ss_pred             HHHhCc-CCCchhhhHHHHHHHHHHHHhC
Confidence            554432 2233456778887777777665

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.53  E-value=9.1e-14  Score=145.27  Aligned_cols=84  Identities=20%  Similarity=0.196  Sum_probs=58.0

Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh-hcHHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR-RDGRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~-~D~~~~~e~ll  523 (581)
                      +..||..|++|+|+||.|||++       .++      .++|+|||++..+.........    .... .-.+.++|.+.
T Consensus       187 L~~LH~~~ivHrDiKp~Nil~~-------~~~------~~kl~DfG~a~~~~~~~~~~~~----~~~~~~~~y~aPE~~~  249 (338)
T cd05102         187 MEFLASRKCIHRDLAARNILLS-------ENN------VVKICDFGLARDIYKDPDYVRK----GSARLPLKWMAPESIF  249 (338)
T ss_pred             HHHHHHCCEECCCCccceEEEc-------CCC------cEEEeecccccccccCcchhcc----cCCCCCccccCcHHhh
Confidence            7889999999999999999998       666      8999999999876432211000    0000 01245566553


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      . .......|.|+|+..+.++++
T Consensus       250 ~-~~~~~~sDiwslG~il~el~~  271 (338)
T cd05102         250 D-KVYTTQSDVWSFGVLLWEIFS  271 (338)
T ss_pred             c-CCCCcccCHHHHHHHHHHHHh
Confidence            3 334456799999999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.53  E-value=9.2e-14  Score=145.41  Aligned_cols=185  Identities=15%  Similarity=0.115  Sum_probs=119.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+.+.+       |..||+|+.+.+.....                                ..  
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~-------~~~~a~k~~~~~~~~~~--------------------------------~~--   48 (331)
T cd06649          10 ISELGAGNGGVVTKVQHKPS-------GLIMARKLIHLEIKPAI--------------------------------RN--   48 (331)
T ss_pred             EEeecCCCCEEEEEEEECCC-------CcEEEEEEeecccCHHH--------------------------------HH--
Confidence            46799999999999999865       69999999765422110                                01  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                          ++.+|.+.+.++.     +++  +.+.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        49 ----~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~-l  116 (331)
T cd06649          49 ----QIIRELQVLHECN-----SPY--IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRG-L  116 (331)
T ss_pred             ----HHHHHHHHHHHCC-----CCC--CCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence                1233444443331     222  222221  122345799999999999999865221 111222334343433 6


Q ss_pred             HHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..+|. ++++|+|+||.|||++       .+|      .++|+|||++..+.+.....       ......+.+.|.+..
T Consensus       117 ~~lH~~~~ivH~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-------~~g~~~y~aPE~~~~  176 (331)
T cd06649         117 AYLREKHQIMHRDVKPSNILVN-------SRG------EIKLCDFGVSGQLIDSMANS-------FVGTRSYMSPERLQG  176 (331)
T ss_pred             HHHhhcCCEEcCCCChhhEEEc-------CCC------cEEEccCccccccccccccc-------CCCCcCcCCHhHhcC
Confidence            67886 4799999999999998       667      89999999988765432211       112334566776643


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .......|.++|+..+.+++.+
T Consensus       177 -~~~~~~~DiwslG~il~el~tg  198 (331)
T cd06649         177 -THYSVQSDIWSMGLSLVELAIG  198 (331)
T ss_pred             -CCCCchHhHHHHHHHHHHHHhC
Confidence             3344567999999999998876

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.52  E-value=3.8e-14  Score=148.35  Aligned_cols=191  Identities=16%  Similarity=0.136  Sum_probs=116.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+++.+.+       ++.||||+....       +.  ..                     ..     
T Consensus         6 ~~~lG~G~fg~V~~~~~~~~-------~~~~aiK~~~~~-------~~--~~---------------------~~-----   43 (332)
T cd05623           6 LKVIGRGAFGEVAVVKLKNA-------DKVFAMKILNKW-------EM--LK---------------------RA-----   43 (332)
T ss_pred             EEEEEeCCCeEEEEEEECCC-------CCEEEEEEEeHH-------HH--HH---------------------hh-----
Confidence            57899999999999999764       689999985321       00  00                     00     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                       ....+..|...+...     +++.  ++..+..  .....+|||||++|++|.+++......  ......++..++.+ 
T Consensus        44 -~~~~~~~e~~~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~a-  114 (332)
T cd05623          44 -ETACFREERDVLVNG-----DNQW--ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIA-  114 (332)
T ss_pred             -HHHHHHHHHHHHhhC-----CCCC--EeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH-
Confidence             001123333322221     1222  2222221  223457999999999999998652211  11122333333333 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||.|||++       .++      .++|+|||++..+.........    .....-.+.+.|.+..
T Consensus       115 l~~lH~~~iiHrDlkp~Nili~-------~~~------~~kL~DfG~a~~~~~~~~~~~~----~~~gt~~y~aPE~~~~  177 (332)
T cd05623         115 IDSVHQLHYVHRDIKPDNILMD-------MNG------HIRLADFGSCLKLMEDGTVQSS----VAVGTPDYISPEILQA  177 (332)
T ss_pred             HHHHHHCCeEecCCCHHHEEEC-------CCC------CEEEeecchheecccCCcceec----ccccCccccCHHHHhc
Confidence            7889999999999999999998       666      8999999998765433211100    0011223566776653


Q ss_pred             h----cCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 L----SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l----~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .    +......|.|+|+..+.+++.+
T Consensus       178 ~~~~~~~~~~~~DvwSlGvil~ell~g  204 (332)
T cd05623         178 MEDGKGKYGPECDWWSLGVCMYEMLYG  204 (332)
T ss_pred             cccCCCCCCCcCCEEeeHHHHHHHhcC
Confidence            2    2344567999999999998876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.52  E-value=5.8e-14  Score=149.82  Aligned_cols=142  Identities=19%  Similarity=0.208  Sum_probs=95.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+++.+  +    |+.||||+..+...                        +.. .+         
T Consensus        23 ~~~IG~G~fg~Vy~a~~~~~--~----~~~vAiK~~~~~~~------------------------~~~-~~---------   62 (365)
T PRK09188         23 TAVLKRDVFSTVERGYFAGD--P----GTARAVRRRVSEVP------------------------WWS-KP---------   62 (365)
T ss_pred             ccEEeecCcEEEEEEEEcCC--C----CeEEEEEEeccccc------------------------ccc-cH---------
Confidence            67899999999999998652  1    57899998654311                        000 00         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                      ..+..|.+|++.+.++.     ++++ +|..+.  ....+|||||++|.+|... .   ...  ...+...+++ .+..+
T Consensus        63 ~~~~~~~~E~~iL~~L~-----h~~i-v~~l~~--~~~~~LVmE~~~G~~L~~~-~---~~~--~~~~~~~i~~-aL~~l  127 (365)
T PRK09188         63 LARHLAAREIRALKTVR-----GIGV-VPQLLA--TGKDGLVRGWTEGVPLHLA-R---PHG--DPAWFRSAHR-ALRDL  127 (365)
T ss_pred             HHHHHHHHHHHHHHhcc-----CCCC-CcEEEE--cCCcEEEEEccCCCCHHHh-C---ccc--hHHHHHHHHH-HHHHH
Confidence            00123566777776553     2222 344443  3457899999999999732 1   111  1233444443 48889


Q ss_pred             hhCCeEecCC-CCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          449 LVDNFIHADM-HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       449 ~~~G~~H~Dl-HPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      |..|++|||+ ||+|||++       .++      +++|+|||++..+.+.
T Consensus       128 H~~gIiHrDL~KP~NILv~-------~~~------~ikLiDFGlA~~~~~~  165 (365)
T PRK09188        128 HRAGITHNDLAKPQNWLMG-------PDG------EAAVIDFQLASVFRRR  165 (365)
T ss_pred             HHCCCeeCCCCCcceEEEc-------CCC------CEEEEECccceecccC
Confidence            9999999999 89999998       566      8999999999987653

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.52  E-value=1.5e-14  Score=157.60  Aligned_cols=192  Identities=17%  Similarity=0.195  Sum_probs=124.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -++||-|.||.|..++-.+|       ...+|.|.++.       .|.-.                       +.-...+
T Consensus       634 ik~iGvGAFGeV~Lv~KvDT-------~~lYAmKTLrK-------aDVl~-----------------------rnQvaHV  676 (1034)
T KOG0608|consen  634 IKTIGVGAFGEVCLVRKVDT-------RALYAMKTLRK-------ADVLM-----------------------RNQVAHV  676 (1034)
T ss_pred             EeeecccccceeEEEeecch-------hhHHHHhhhHH-------HHHHh-----------------------hhhhhhh
Confidence            47899999999999988765       46677775432       12211                       1111234


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCc--EEEEeccCCccHHHHHHhhhcchhhHHHHHHHHH---HH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA--VLVETYEQGECVSRYVDELQGHERLKSALAHIGT---HA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~--VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i---~a  443 (581)
                      ..|-|...||.|             -.|.+.|+.+..+.  +.||||++|+.+..++-..+   ...+.+|+-.+   .+
T Consensus       677 KAERDILAEADn-------------~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmg---IFeE~LARFYIAEltc  740 (1034)
T KOG0608|consen  677 KAERDILAEADN-------------EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG---IFEEDLARFYIAELTC  740 (1034)
T ss_pred             hhhhhhHhhcCC-------------cceEEEEEEeccCCceEEEEeccCCccHHHHHHHhc---cCHHHHHHHHHHHHHH
Confidence            556666666654             12335555554333  57999999999988764322   22333433222   24


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH-----------hh-------------
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK-----------TD-------------  499 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~-----------~~-------------  499 (581)
                      .++.+|+-|||||||||.||||+       .+|      +|+|.|||+++-+.-           ..             
T Consensus       741 AiesVHkmGFIHRDiKPDNILID-------rdG------HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d  807 (1034)
T KOG0608|consen  741 AIESVHKMGFIHRDIKPDNILID-------RDG------HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWAD  807 (1034)
T ss_pred             HHHHHHhccceecccCccceEEc-------cCC------ceeeeeccccccceeccccccccCCCccccccCCCchhhcc
Confidence            47889999999999999999999       889      999999999875420           00             


Q ss_pred             -------------HHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          500 -------------RVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       500 -------------r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                                   +..-.-+-..++-.--|-+.|.+.+-|..+.| |-|...-.|.+++.+
T Consensus       808 ~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c-dwws~gvil~em~~g  867 (1034)
T KOG0608|consen  808 ISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC-DWWSVGVILYEMLVG  867 (1034)
T ss_pred             ccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc-hhhHhhHHHHHHhhC
Confidence                         00001122233333345667777777777766 899999999998766

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.52  E-value=5.4e-14  Score=139.96  Aligned_cols=188  Identities=18%  Similarity=0.162  Sum_probs=111.7

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|+||+|+++.+       |+.||||+.........                                     
T Consensus         1 ~~lg~g~~g~vy~~~~~~~-------~~~~a~k~~~~~~~~~~-------------------------------------   36 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRAD-------NTPVAVKSCRETLPPDL-------------------------------------   36 (252)
T ss_pred             CccCcccCccEEEEEEecC-------CceEEEEecCccCCHHH-------------------------------------
Confidence            4689999999999999764       68999998654321110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALLKM  447 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l~~  447 (581)
                       +-++.+|.+.+.++     +++++.-...+.......++||||++|.+|.+++......  ......++..++.+ +..
T Consensus        37 -~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~-L~~  109 (252)
T cd05084          37 -KAKFLQEARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAG-MEY  109 (252)
T ss_pred             -HHHHHHHHHHHHhC-----CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHH-HHH
Confidence             11233444433332     1232221111122234568999999999999988542211  11112334444443 678


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc-HHHHHHHHHhhc
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD-GRTAAECTLRLS  526 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D-~~~~~e~ll~l~  526 (581)
                      +|..|++|+|++|+||+++       .++      .++|+|||++..+.+.......    ...... .+.++|.+ .-+
T Consensus       110 lH~~~i~H~dl~p~nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~-~~~  171 (252)
T cd05084         110 LESKHCIHRDLAARNCLVT-------EKN------VLKISDFGMSREEEDGVYASTG----GMKQIPVKWTAPEAL-NYG  171 (252)
T ss_pred             HHhCCccccccchheEEEc-------CCC------cEEECccccCcccccccccccC----CCCCCceeecCchhh-cCC
Confidence            8999999999999999998       666      8999999998765432111000    000000 13344443 223


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 008021          527 KQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ......|.++|+..+.+++.
T Consensus       172 ~~~~~~Dv~slG~il~e~~~  191 (252)
T cd05084         172 RYSSESDVWSFGILLWEAFS  191 (252)
T ss_pred             CCChHHHHHHHHHHHHHHHh
Confidence            33345688888888877764

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.52  E-value=1.3e-13  Score=146.00  Aligned_cols=118  Identities=17%  Similarity=0.113  Sum_probs=80.1

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEE
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIF  486 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvL  486 (581)
                      .++||||++| .+.+++... ........++..++.+ +..+|..|++|+|+||.||+++       .++      .++|
T Consensus       104 ~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kL  167 (364)
T cd07875         104 VYIVMELMDA-NLCQVIQME-LDHERMSYLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVK-------SDC------TLKI  167 (364)
T ss_pred             EEEEEeCCCC-CHHHHHHhc-CCHHHHHHHHHHHHHH-HHHHhhCCeecCCCCHHHEEEC-------CCC------cEEE
Confidence            4799999987 455554321 1111122344444443 7889999999999999999998       667      8999


Q ss_pred             EecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       487 iDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|||++.........      ........+.+.|.+.. .......|.++|+..+.+++.+
T Consensus       168 ~DfG~a~~~~~~~~~------~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g  221 (364)
T cd07875         168 LDFGLARTAGTSFMM------TPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKG  221 (364)
T ss_pred             EeCCCccccCCCCcc------cCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHHhC
Confidence            999999765442211      01122345667777654 3344567999999999999877

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.52  E-value=8.9e-14  Score=135.51  Aligned_cols=179  Identities=24%  Similarity=0.189  Sum_probs=106.7

Q ss_pred             EEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHH
Q 008021          300 VHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA  379 (581)
Q Consensus       300 VyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~  379 (581)
                      ||.|...+        |++||||+-+.+... ++.    .+   .....-+.+........     .....+.-..+|++
T Consensus         2 Vy~~~~~~--------~~~~a~K~~r~~~~~-Fk~----~~---~y~~~~~r~~~~~~~~~-----~~~~~~~~~~~E~~   60 (188)
T PF01163_consen    2 VYHAIDPD--------GEEVAVKIYRTGRTS-FKR----RK---KYRDYDYRFKKYRHKSS-----WRYLIREWAKKEFR   60 (188)
T ss_dssp             EEEEEECT--------TEEEEEEEE-S---S-S-H----HH---HHTTTSTTSTTC--G-------CHHHHHHHHHHHHH
T ss_pred             EEEEECCC--------CCEEEEEEeccCceE-EEE----ee---eeecccchhcccccccC-----HHHHHHHHHHHHHH
Confidence            88888754        699999999887432 222    11   11111111110000000     01122345577899


Q ss_pred             HHHHHHHhcccCCCcccccccccCCCCcEEEEeccC--CccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecC
Q 008021          380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQ--GECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD  457 (581)
Q Consensus       380 nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~--G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~D  457 (581)
                      ++.++.     ..++.+|+|+  ...+++|||||++  |.++..+.+.. ........+...+++.+..+++..|++|+|
T Consensus        61 ~L~~l~-----~~Gv~vP~p~--~~~~~~ivME~I~~~G~~~~~l~~~~-~~~~~~~~~~~~il~~~~~~~~~~givHGD  132 (188)
T PF01163_consen   61 NLKRLY-----EAGVPVPKPY--DYNRNVIVMEYIGEDGVPLPRLKDVD-LSPEEPKELLEEILEEIIKMLHKAGIVHGD  132 (188)
T ss_dssp             HHHHCC-----CTT-SS--EE--EEETTEEEEE--EETTEEGGCHHHCG-GGGSTHHHHHHHHHHHHHHHHHCTTEEESS
T ss_pred             HHHHHH-----HCCccCCcEE--EEeCCEEEEEecCCCccchhhHHhcc-ccchhHHHHHHHHHHHHHHHHHhcCceecC
Confidence            988764     3368899998  5578999999999  99998865432 112234556666667678888999999999


Q ss_pred             CCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       458 lHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |++.||++.       + +      ++++||||.+.......-..       ++.+|...+.+-+-+.+..
T Consensus       133 Ls~~NIlv~-------~-~------~~~iIDf~qav~~~~p~a~~-------~l~RDi~ni~~fF~~~~~~  182 (188)
T PF01163_consen  133 LSEYNILVD-------D-G------KVYIIDFGQAVDSSHPNAEE-------LLRRDIENIIRFFKKKGVQ  182 (188)
T ss_dssp             -STTSEEEE-------T-T------CEEE--GTTEEETTSTTHHH-------HHHHHHHHHHHHHHCCC--
T ss_pred             CChhhEEee-------c-c------eEEEEecCcceecCCccHHH-------HHHHHHHHHHHHHHHhCCC
Confidence            999999998       3 3      69999999998877554444       3477888888777665543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.52  E-value=1e-13  Score=137.09  Aligned_cols=141  Identities=20%  Similarity=0.223  Sum_probs=98.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -++||+||||.+|.|....+       |++||||+-...++                   .|.                 
T Consensus        20 vrkiGsGSFGdIy~~~~i~~-------ge~VAiK~Es~~a~-------------------hpq-----------------   56 (341)
T KOG1163|consen   20 VRKIGSGSFGDIYLGISITS-------GEEVAIKLESSKAK-------------------HPQ-----------------   56 (341)
T ss_pred             EEeecCCchhheeeeeeccC-------CceEEEEeecccCC-------------------Ccc-----------------
Confidence            47999999999999998764       79999998655432                   221                 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCC--CcEEEEeccCCccHHHHHHhhhcchhhH--HHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH--PAVLVETYEQGECVSRYVDELQGHERLK--SALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t--~~VLVmEyi~G~~L~~~l~~~~~~~~~~--~~la~~~i~a~  444 (581)
                           +..|++--..    +  ...+.+|.+.+-.+.  -+||||+.+ |.+|.++..-+...-..+  .-+|+.++.- 
T Consensus        57 -----L~yEskvY~i----L--~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~R-  123 (341)
T KOG1163|consen   57 -----LLYESKVYRI----L--QGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSR-  123 (341)
T ss_pred             -----hhHHHHHHHH----h--ccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHH-
Confidence                 1234432222    2  235678887765543  469999988 999999876543322222  2355555543 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ++.+|.++|+|||+||.|+|......    ..      ++-|||||+++..
T Consensus       124 iEyvH~r~fiHRDIKPdNFLMGlgrh----~~------kl~LIDFGLaKky  164 (341)
T KOG1163|consen  124 IEYVHLRNFIHRDIKPDNFLMGLGRH----CN------KLYLIDFGLAKKY  164 (341)
T ss_pred             HHHHHhhccccccCCccceeeccccc----cc------eEEEEeccchhhh
Confidence            78899999999999999999985332    22      8999999999865

>PTZ00284 protein kinase; Provisional

Probab=99.52  E-value=1.3e-13  Score=151.52  Aligned_cols=201  Identities=15%  Similarity=0.119  Sum_probs=114.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|++..+       ++.||||+.+....                                  +....
T Consensus       134 ~~~lG~G~fg~V~~a~~~~~-------~~~vAvK~i~~~~~----------------------------------~~~~~  172 (467)
T PTZ00284        134 LSLLGEGTFGKVVEAWDRKR-------KEYCAVKIVRNVPK----------------------------------YTRDA  172 (467)
T ss_pred             EEEEEeccCEEEEEEEEcCC-------CeEEEEEEEecchh----------------------------------hHHHH
Confidence            46899999999999999764       68999998642100                                  00111


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc---ccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV---YPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~---~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~  444 (581)
                      ..|+.+..+.++..     .  .....++..+   ..-....++|||++ |..|.+++..... .......++..++.+ 
T Consensus       173 ~~e~~~l~~l~~~~-----~--~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~a-  243 (467)
T PTZ00284        173 KIEIQFMEKVRQAD-----P--ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVA-  243 (467)
T ss_pred             HHHHHHHHHHhhcC-----c--ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHH-
Confidence            22333333332211     0  0111122222   11123457899988 6677776643211 111223344444444 


Q ss_pred             HHHhhh-CCeEecCCCCCCEEEeeccccccc---ccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          445 LKMLLV-DNFIHADMHPGNILVRVAQKKSSQ---KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       445 l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~---~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +..||. .|++||||||+|||++........   .........++|+|||.+........        ..+....+.+.|
T Consensus       244 L~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~--------~~~gt~~Y~APE  315 (467)
T PTZ00284        244 LDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRT--------AIVSTRHYRSPE  315 (467)
T ss_pred             HHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccc--------cccCCccccCcH
Confidence            788997 599999999999999822100000   00000123699999998754322111        112234577888


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .+... .+....|.|+|++.+.+++.+.
T Consensus       316 ~~~~~-~~~~~~DiwSlGvil~elltG~  342 (467)
T PTZ00284        316 VVLGL-GWMYSTDMWSMGCIIYELYTGK  342 (467)
T ss_pred             HhhcC-CCCcHHHHHHHHHHHHHHHhCC
Confidence            87543 3445679999999999999873

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=9.7e-14  Score=140.09  Aligned_cols=193  Identities=20%  Similarity=0.148  Sum_probs=119.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+.+.+....                            ..       
T Consensus         6 ~~~l~~g~~g~v~~~~~~~~-------~~~~~iK~~~~~~~~~----------------------------~~-------   43 (277)
T cd06917           6 LELIGRGAYGAVYRGKHVPT-------GRVVALKIINLDTPDD----------------------------DV-------   43 (277)
T ss_pred             hhheeccCCceEEEEEEcCC-------CcEEEEEEecCCCCch----------------------------hH-------
Confidence            36799999999999998764       6999999876542110                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                         -++.+|...+.++..  ..++++.-..-+.......++||||++|.+|.+++....-.......++..++.+ +..+
T Consensus        44 ---~~~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~-l~~l  117 (277)
T cd06917          44 ---SDIQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVA-LKYI  117 (277)
T ss_pred             ---HHHHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHH-HHHH
Confidence               012344444444421  1122222111111223446899999999999998754321222223344444444 6789


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|++|.||+++       .++      .++|+|||++..+.........     ......+.+.|.+..-...
T Consensus       118 h~~~i~H~dl~p~ni~i~-------~~~------~~~l~dfg~~~~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~  179 (277)
T cd06917         118 HKVGVIHRDIKAANILVT-------NTG------NVKLCDFGVAALLNQNSSKRST-----FVGTPYWMAPEVITEGKYY  179 (277)
T ss_pred             HhCCcccCCcCHHHEEEc-------CCC------CEEEccCCceeecCCCcccccc-----ccCCcceeCHHHhccCCcc
Confidence            999999999999999999       666      8999999998876554321100     0112234455655332223


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.++|+..+.+++.+
T Consensus       180 ~~~~Dv~slG~~l~~ll~g  198 (277)
T cd06917         180 DTKADIWSLGITIYEMATG  198 (277)
T ss_pred             ccchhHHHHHHHHHHHHhC
Confidence            4567899999998888876

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=6e-14  Score=154.89  Aligned_cols=208  Identities=15%  Similarity=0.065  Sum_probs=136.4

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|. ...+|.||||.|+.|.++.+       ++..|||+++.+.-- .+.|+.-+                         
T Consensus       369 ~F~~l~vLGkGsFGkV~lae~k~~-------~e~yAIK~LKK~~Il-~~d~Ve~~-------------------------  415 (694)
T KOG0694|consen  369 DFRLLAVLGRGSFGKVLLAELKGT-------NEYYAIKVLKKGDIL-QRDEVESL-------------------------  415 (694)
T ss_pred             ceEEEEEeccCcCceEEEEEEcCC-------CcEEEEEEeecccee-ccccHHHH-------------------------
Confidence            344 57899999999999999976       799999999877310 01111100                         


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCC--cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP--AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH  442 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~--~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~  442 (581)
                                ..|.+-++ +..   .++.+.  ..+.-+.|+  -+.||||+.|+++..+.+.. .-...+..+...-+-
T Consensus       416 ----------~~EkrI~~-la~---~HPFL~--~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~-~F~e~rarfyaAev~  478 (694)
T KOG0694|consen  416 ----------MCEKRIFE-LAN---RHPFLV--NLFSCFQTKEHLFFVMEYVAGGDLMHHIHTD-VFSEPRARFYAAEVV  478 (694)
T ss_pred             ----------HHHHHHHH-Hhc---cCCeEe--ecccccccCCeEEEEEEecCCCcEEEEEecc-cccHHHHHHHHHHHH
Confidence                      12222221 111   222211  122223333  36799999999966554321 111122333333334


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC-H-hhHHHHHHHHHHHHhhcHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS-K-TDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~-~-~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      ..|+.||++|||+||+|-.|||++       .+|      .++|+||||+++-- . .....|        .+..+-+|-
T Consensus       479 l~L~fLH~~~IIYRDlKLdNiLLD-------~eG------h~kiADFGlcKe~m~~g~~TsTf--------CGTpey~aP  537 (694)
T KOG0694|consen  479 LGLQFLHENGIIYRDLKLDNLLLD-------TEG------HVKIADFGLCKEGMGQGDRTSTF--------CGTPEFLAP  537 (694)
T ss_pred             HHHHHHHhcCceeeecchhheEEc-------ccC------cEEecccccccccCCCCCccccc--------cCChhhcCh
Confidence            558999999999999999999999       888      99999999999753 2 223334        355555555


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      .++.-..+...+|=|+|+--|.+++.+.  +...+.+++++.+.+-
T Consensus       538 Eil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d  583 (694)
T KOG0694|consen  538 EVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND  583 (694)
T ss_pred             hhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC
Confidence            5555566778999999999999998874  7888888888877654

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.51  E-value=1.7e-13  Score=142.66  Aligned_cols=190  Identities=18%  Similarity=0.085  Sum_probs=116.2

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|+...+       ++.||||+.++..... .                         +..        
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~-~-------------------------~~~--------   39 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGT-------NQFFAIKALKKDVVLM-D-------------------------DDV--------   39 (316)
T ss_pred             CeeeeCCCEEEEEEEECCC-------CCEEEEEEEEHHHhhh-c-------------------------chH--------
Confidence            3589999999999999765       6899999976542100 0                         000        


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                        -.+..|...+..    ..+++.+  ++.+..  .....++||||++|++|.+++..... .......++..++.+ +.
T Consensus        40 --~~~~~e~~~l~~----~~~hp~i--v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~a-l~  110 (316)
T cd05619          40 --ECTMVEKRVLSL----AWEHPFL--THLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICG-LQ  110 (316)
T ss_pred             --HHHHHHHHHHHh----ccCCCcC--cceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HH
Confidence              001122222211    1122322  222221  22345799999999999998864221 112223344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||.||+++       .++      .++|+|||++..........     ........+.++|.+.. .
T Consensus       111 ~LH~~~ivHrdikp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~  171 (316)
T cd05619         111 FLHSKGIVYRDLKLDNILLD-------TDG------HIKIADFGMCKENMLGDAKT-----CTFCGTPDYIAPEILLG-Q  171 (316)
T ss_pred             HHHhCCeEeCCCCHHHEEEC-------CCC------CEEEccCCcceECCCCCCce-----eeecCCccccCHHHHcC-C
Confidence            89999999999999999998       666      89999999987532111100     00111224566676543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ......|.|+|+..+.+++.+.
T Consensus       172 ~~~~~~DvwslG~il~el~~G~  193 (316)
T cd05619         172 KYNTSVDWWSFGVLLYEMLIGQ  193 (316)
T ss_pred             CCCchhhhhhHHHHHHHHHhCC
Confidence            3445679999999999998763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.51  E-value=1.1e-13  Score=141.05  Aligned_cols=188  Identities=16%  Similarity=0.094  Sum_probs=115.0

Q ss_pred             ecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHH
Q 008021          292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ  371 (581)
Q Consensus       292 IgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~E  371 (581)
                      ||+|++|.||++..+.+       |+.||||+........                          .   ..       .
T Consensus         1 lg~G~~g~Vy~~~~~~~-------~~~~avK~~~~~~~~~--------------------------~---~~-------~   37 (280)
T cd05608           1 LGKGGFGEVSACQMRAT-------GKLYACKKLNKKRLKK--------------------------R---KG-------Y   37 (280)
T ss_pred             CCCCCceeEEEEEEccC-------CcEEEEEeeeHHHHhh--------------------------h---HH-------H
Confidence            68999999999999865       6999999854321000                          0   00       0


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHHHHHHH
Q 008021          372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGTHALLK  446 (581)
Q Consensus       372 lDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i~a~l~  446 (581)
                      -.+..|.+.+.++.     ++.+....-........++||||++|++|.+++.....     .......++..++.+ +.
T Consensus        38 ~~~~~E~~il~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~-l~  111 (280)
T cd05608          38 EGAMVEKRILAKVH-----SRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG-LE  111 (280)
T ss_pred             HHHHHHHHHHHhCC-----CCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH-HH
Confidence            11234544444331     22222111111223446899999999999887632111     111112334444433 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|++|.||+++       .++      .++|+|||++..+.......     ........+.+.|.+.. .
T Consensus       112 ~lH~~~i~H~dlkp~Nili~-------~~~------~~~l~dfg~~~~~~~~~~~~-----~~~~g~~~y~aPE~~~~-~  172 (280)
T cd05608         112 HLHQRRIIYRDLKPENVLLD-------NDG------NVRISDLGLAVELKDGQSKT-----KGYAGTPGFMAPELLQG-E  172 (280)
T ss_pred             HHHHCCcccCCCCHHHEEEC-------CCC------CEEEeeCccceecCCCCccc-----cccCCCcCccCHHHhcC-C
Confidence            89999999999999999998       666      89999999987765432110     00111224556666643 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.++|+..+.+++.+
T Consensus       173 ~~~~~~DvwslG~il~el~~g  193 (280)
T cd05608         173 EYDFSVDYFALGVTLYEMIAA  193 (280)
T ss_pred             CCCccccHHHHHHHHHHHHhC
Confidence            344567999999999998876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.51  E-value=4e-15  Score=150.48  Aligned_cols=162  Identities=22%  Similarity=0.223  Sum_probs=114.3

Q ss_pred             HHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHh
Q 008021          267 YTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKIS  346 (581)
Q Consensus       267 ~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~  346 (581)
                      ...+.=+.++.++++|+|+-.  +.+|.||+|.||+|.++.+       |+.||||-..-+      .            
T Consensus        18 ~~~KLd~~sL~K~PEEVFDi~--~KLGEGSYGSV~KAIH~Es-------G~v~AIK~VPV~------s------------   70 (502)
T KOG0574|consen   18 DGFKLDSSALNKPPEEVFDIV--GKLGEGSYGSVHKAIHRES-------GHVLAIKKVPVD------T------------   70 (502)
T ss_pred             cccccChhhhcCChHHHHHHH--HHhcCCcchHHHHHHHhcc-------CcEEEEEecCcc------c------------
Confidence            445556678899999998754  4599999999999999986       799999953321      2            


Q ss_pred             cccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHH
Q 008021          347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVD  424 (581)
Q Consensus       347 ~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~  424 (581)
                               +|.+++.++  ++++|+|                   .-++.+.|..|  .+.-++|||||..+++++.++
T Consensus        71 ---------DLQEIIKEI--SIMQQC~-------------------S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R  120 (502)
T KOG0574|consen   71 ---------DLQEIIKEI--SIMQQCK-------------------SKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMR  120 (502)
T ss_pred             ---------hHHHHHHHH--HHHHHcC-------------------CchhhhhhhhhccCCceEeehhhcCCCcHHHHHH
Confidence                     334444433  1222222                   12233334333  245579999999999999986


Q ss_pred             hhhcchhhHHHHHHHHHHHH--HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh
Q 008021          425 ELQGHERLKSALAHIGTHAL--LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD  499 (581)
Q Consensus       425 ~~~~~~~~~~~la~~~i~a~--l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~  499 (581)
                      .. .......+++..+-..+  |+.||.-.-+|||+|.||||+.       .+|      ..+|.|||.++++++..
T Consensus       121 ~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN-------T~G------~AKLADFGVAGQLTDTM  183 (502)
T KOG0574|consen  121 AR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN-------TDG------IAKLADFGVAGQLTDTM  183 (502)
T ss_pred             Hh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc-------ccc------hhhhhhccccchhhhhH
Confidence            42 22233455665554433  7788888889999999999999       788      89999999999998864

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.51  E-value=1.9e-13  Score=134.14  Aligned_cols=185  Identities=18%  Similarity=0.152  Sum_probs=119.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|+||+|....+       |+.|++|+.++...+                                      
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~--------------------------------------   39 (253)
T cd05122           5 LEKIGKGGFGEVYKARHKRT-------GKEVAIKVIKLESKE--------------------------------------   39 (253)
T ss_pred             eeeeccCCceEEEEEEECCC-------CcEEEEEEecccchh--------------------------------------
Confidence            57899999999999999764       689999998765320                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                       ..-++.+|...+.++.     .++  ++..+.  ......+++|||++|.+|.+++.....  .......++..++.+ 
T Consensus        40 -~~~~~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~-  110 (253)
T cd05122          40 -KKEKIINEIQILKKCK-----HPN--IVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKG-  110 (253)
T ss_pred             -HHHHHHHHHHHHHhCC-----CCC--EeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHH-
Confidence             0112233443333321     122  222221  123456899999999999998765311  111223344444443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|+||+++       .++      +++|+|||.+..+.......      .......+..+|.+..
T Consensus       111 l~~lh~~~i~h~dl~p~ni~i~-------~~~------~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~PE~~~~  171 (253)
T cd05122         111 LEYLHSNGIIHRDIKAANILLT-------SDG------EVKLIDFGLSAQLSDTKARN------TMVGTPYWMAPEVING  171 (253)
T ss_pred             HHHhhcCCEecCCCCHHHEEEc-------cCC------eEEEeecccccccccccccc------ceecCCcccCHHHHcC
Confidence            7889999999999999999998       666      89999999998877654200      0112223445554432


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       +......|.++|+..+.+++.+
T Consensus       172 -~~~~~~~Dv~slG~il~~l~~g  193 (253)
T cd05122         172 -KPYDYKADIWSLGITAIELAEG  193 (253)
T ss_pred             -CCCCccccHHHHHHHHHHHHhC
Confidence             3344567999999999888876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.51  E-value=3e-14  Score=141.57  Aligned_cols=191  Identities=21%  Similarity=0.181  Sum_probs=120.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       ++.||+|+....-...-                               ..   
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~-------~~~~~~K~~~~~~~~~~-------------------------------~~---   42 (260)
T PF00069_consen    4 VKKLGSGGFGTVYKAKNKKN-------GQKVAVKIIDKSEIEEE-------------------------------ER---   42 (260)
T ss_dssp             EEEEEEESSEEEEEEEETTT-------TEEEEEEEEESTTHHHH-------------------------------HH---
T ss_pred             eEEEEeCCCEEEEEEEECCC-------CeEEEEEEecccccccc-------------------------------cc---
Confidence            36899999999999999875       68999999776522110                               00   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHh-hhcchhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDE-LQGHERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~-~~~~~~~~~~la~~~i~a~l~~  447 (581)
                         .....|...+.++.     ++.+.-...+......-+++|||++|.+|.+++.. ..........++..++++ +..
T Consensus        43 ---~~~~~e~~~~~~l~-----~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~-L~~  113 (260)
T PF00069_consen   43 ---EENIREIKILRRLR-----HPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEA-LAY  113 (260)
T ss_dssp             ---HHHHHHHHHHHHHT-----BTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHH-HHH
T ss_pred             ---chhhhhhhcccccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccc
Confidence               00112444444442     23322111122224456799999999999999872 222222234455555554 889


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      ||..|++|+|++|.||+++       .++      +++|+|||.+...+.....     .......+.+.++|.+.....
T Consensus       114 Lh~~~i~H~dikp~NIl~~-------~~~------~~~l~Dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~  175 (260)
T PF00069_consen  114 LHSKGIVHRDIKPENILLD-------ENG------EVKLIDFGSSVKLSENNEN-----FNPFVGTPEYMAPEVLQQGKK  175 (260)
T ss_dssp             HHHTTEEESSBSGGGEEES-------TTS------EEEESSGTTTEESTSTTSE-----BSSSSSSGGGSCHHHHTTTSS
T ss_pred             ccccccccccccccccccc-------ccc------ccccccccccccccccccc-----ccccccccccccccccccccc
Confidence            9999999999999999999       666      8999999998753111000     000112334556666543444


Q ss_pred             CCCCCCHHHHHHHHHHhhhH
Q 008021          528 QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....|.++++..+.+++.+
T Consensus       176 ~~~~~Di~slG~il~~l~~~  195 (260)
T PF00069_consen  176 YTRKSDIWSLGIILYELLTG  195 (260)
T ss_dssp             BSTHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccc
Confidence            55566888888888888776

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.51  E-value=2.1e-13  Score=141.89  Aligned_cols=188  Identities=18%  Similarity=0.067  Sum_probs=114.8

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      -||+|++|.||+|+.+.+       ++.||||+.+......  .                        +..         
T Consensus         2 ~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~--~------------------------~~~---------   39 (318)
T cd05570           2 VLGKGSFGKVLLAELKGT-------DELYAVKVLKKDVILQ--D------------------------DDV---------   39 (318)
T ss_pred             eeeeCCCeEEEEEEECCC-------CCEEEEEEEEHHHHhh--h------------------------hHH---------
Confidence            489999999999999764       6899999865431000  0                        000         


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       371 ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                       -.+..|...+...    ..+++  +++.+.  .....-++||||++|.+|.+++..... .......++..++.+ +..
T Consensus        40 -~~~~~e~~il~~~----~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~-l~~  111 (318)
T cd05570          40 -ECTMTEKRVLALA----GKHPF--LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLG-LQF  111 (318)
T ss_pred             -HHHHHHHHHHHhc----cCCCC--ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-HHH
Confidence             0112233322221    12222  223322  122345799999999999988754321 112222344444444 778


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      ||..|++|+|++|.||+++       .+|      .++|+|||++...........     .....-.+.++|.+.. ..
T Consensus       112 LH~~~ivH~dlkp~Nill~-------~~~------~~kl~Dfg~~~~~~~~~~~~~-----~~~g~~~y~aPE~~~~-~~  172 (318)
T cd05570         112 LHERGIIYRDLKLDNVLLD-------SEG------HIKIADFGMCKEGILGGVTTS-----TFCGTPDYIAPEILSY-QP  172 (318)
T ss_pred             HHhCCeEccCCCHHHeEEC-------CCC------cEEecccCCCeecCcCCCccc-----ceecCccccCHHHhcC-CC
Confidence            9999999999999999998       667      899999998865321111000     0011223456666643 33


Q ss_pred             CCCCCCHHHHHHHHHHhhhH
Q 008021          528 QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....|.|+|+..+.+++.+
T Consensus       173 ~~~~~DiwslGvil~~l~~G  192 (318)
T cd05570         173 YGPAVDWWALGVLLYEMLAG  192 (318)
T ss_pred             CCcchhhhhHHHHHHHHhhC
Confidence            44567999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.51  E-value=8.8e-14  Score=143.74  Aligned_cols=196  Identities=18%  Similarity=0.129  Sum_probs=117.0

Q ss_pred             CCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCc-hhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHH
Q 008021          287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV-GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA  365 (581)
Q Consensus       287 fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v-~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~  365 (581)
                      ++...||.|++|.||+|+.++.     ..++.||||+....- ...                                  
T Consensus         4 ~~~~~lG~G~~g~Vy~~~~~~~-----~~~~~~aiK~~~~~~~~~~----------------------------------   44 (317)
T cd07868           4 YEGCKVGRGTYGHVYKAKRKDG-----KDDRDYALKQIEGTGISMS----------------------------------   44 (317)
T ss_pred             ccccccccCCCeEEEEEEEccC-----CCCceEEEEEECCCCCcHH----------------------------------
Confidence            5567899999999999997642     125899999865321 111                                  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccC-CCCcEEEEeccCCccHHHHHHhhhc----------chhhH
Q 008021          366 VFMMSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG----------HERLK  433 (581)
Q Consensus       366 ~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~----------~~~~~  433 (581)
                              ..+|.+.+.++.     ++++ .+...+... ...-+++|||++| ++.+++.....          .....
T Consensus        45 --------~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~  110 (317)
T cd07868          45 --------ACREIALLRELK-----HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMV  110 (317)
T ss_pred             --------HHHHHHHHHhcC-----CCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHH
Confidence                    122333333321     2222 111111111 1224689999976 67666542110          01111


Q ss_pred             HHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh
Q 008021          434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR  513 (581)
Q Consensus       434 ~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~  513 (581)
                      ..++..++.+ +..||..|++|+|+||.|||+....+   .++      .++|+|||++..++..... ... .......
T Consensus       111 ~~i~~qi~~a-l~~LH~~~ivHrDlkp~Nil~~~~~~---~~~------~~kl~DfG~a~~~~~~~~~-~~~-~~~~~~t  178 (317)
T cd07868         111 KSLLYQILDG-IHYLHANWVLHRDLKPANILVMGEGP---ERG------RVKIADMGFARLFNSPLKP-LAD-LDPVVVT  178 (317)
T ss_pred             HHHHHHHHHH-HHHHHhCCEEcCCCCHHHEEEecCCC---CcC------cEEEeecCceeccCCCCcc-ccc-cCCcccc
Confidence            2344444444 78899999999999999999962111   344      8999999999766433211 000 0011122


Q ss_pred             cHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          514 DGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       514 D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..+.++|.+..........|.|+++..+.+++.+
T Consensus       179 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  212 (317)
T cd07868         179 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS  212 (317)
T ss_pred             ccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhC
Confidence            3467788876655556678999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.50  E-value=4.3e-13  Score=131.47  Aligned_cols=187  Identities=18%  Similarity=0.179  Sum_probs=112.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccc-ccccChhHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA-VKWLRLDESVQQFAVFM  368 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~-l~~l~l~e~v~ef~~~l  368 (581)
                      .+||+|--|.||.|...+. ++....+.+|||||-+....+-     +-.+....--..+.. ..+.+....+..     
T Consensus         3 g~i~~GKEa~V~~~~~~~~-~~~~~~~~~~avKi~r~~~~~F-----k~~~~y~~~~~rf~~~~~k~~~~~~~~~-----   71 (197)
T cd05146           3 GCISTGKESVVLHANGGSN-ETEQVIPTECAIKVFKTTLNEF-----KNRDKYIKDDYRFKDRFSKLNPRKIIRM-----   71 (197)
T ss_pred             CccccCcceEEEEEecCcc-cccccCCceEEEEEEeccceeE-----cChhhhccCCcccccCcCCCCHHHHHHH-----
Confidence            4799999999999986431 0001125799999988664321     111100000001110 001222223322     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHH-HHHhhhcchhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR-YVDELQGHERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~-~l~~~~~~~~~~~~la~~~i~a~l~~  447 (581)
                          --++|++++.++.+.     ++.+|+|+  ...+++|||||++|..+.. .+++..........+....+..+..+
T Consensus        72 ----wa~kE~r~L~rl~~~-----Gv~vP~pi--~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l  140 (197)
T cd05146          72 ----WAEKEMHNLKRMQKA-----GIPCPEVV--VLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQL  140 (197)
T ss_pred             ----HHHHHHHHHHHHHHc-----CCCCCeEE--EecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHH
Confidence                235789999988754     68899999  4589999999998753211 11111111111233445555555556


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      +|..|++|+||+|.|||+.       + |      +++|||||.+...+...-..|+       .+|...+.
T Consensus       141 ~H~~glVHGDLs~~NIL~~-------~-~------~v~iIDF~qav~~~hp~a~~~l-------~RD~~ni~  191 (197)
T cd05146         141 YKECNLVHADLSEYNMLWH-------D-G------KVWFIDVSQSVEPTHPHGLEFL-------FRDCRNVI  191 (197)
T ss_pred             HHhCCeecCCCCHHHEEEE-------C-C------cEEEEECCCceeCCCCCHHHHH-------HHHHHHHH
Confidence            6899999999999999997       3 4      7999999999998876655543       45555444

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.50  E-value=4.4e-13  Score=126.32  Aligned_cols=182  Identities=20%  Similarity=0.157  Sum_probs=114.5

Q ss_pred             ecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHH
Q 008021          292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ  371 (581)
Q Consensus       292 IgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~E  371 (581)
                      ||+|++|+||+++...+       |++++||+.+++....                                      .+
T Consensus         1 l~~g~~~~v~~~~~~~~-------~~~~~~K~~~~~~~~~--------------------------------------~~   35 (215)
T cd00180           1 LGEGGFGTVYLARDKKT-------GKKVAIKIIKKEDSSS--------------------------------------LL   35 (215)
T ss_pred             CCcCCceEEEEEEecCC-------CcEEEEEEeccccchh--------------------------------------HH
Confidence            68999999999999753       6999999987763211                                      11


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhh--hcchhhHHHHHHHHHHHHHHH
Q 008021          372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHALLKM  447 (581)
Q Consensus       372 lDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~--~~~~~~~~~la~~~i~a~l~~  447 (581)
                      -.+.+|.+.+.++..       ..+|+++..  .....+++|||++|.+|.+++...  .........++..++.+ +..
T Consensus        36 ~~~~~e~~~~~~l~~-------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~  107 (215)
T cd00180          36 EELLREIEILKKLNH-------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEG-LEY  107 (215)
T ss_pred             HHHHHHHHHHHhcCC-------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH-HHH
Confidence            223445444444321       234444332  234678999999999999998653  12222223344444444 788


Q ss_pred             hhhCCeEecCCCCCCEEEeeccccccc-ccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQ-KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~-~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      +|..|++|+|++|+||++.       . ++      +++|+|||.+........     ..........+...+.+....
T Consensus       108 lh~~~~~H~dl~~~ni~~~-------~~~~------~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~  169 (215)
T cd00180         108 LHSNGIIHRDLKPENILLD-------SDNG------KVKLADFGLSKLLTSDKS-----LLKTIVGTPAYMAPEVLLGKG  169 (215)
T ss_pred             HHhCCeeccCCCHhhEEEe-------CCCC------cEEEecCCceEEccCCcc-----hhhcccCCCCccChhHhcccC
Confidence            9999999999999999999       4 55      899999999987765532     011111222333344332211


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 008021          527 KQQNCPNPKAFIEWMRLL  544 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l  544 (581)
                      ......|.+.++..+.++
T Consensus       170 ~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         170 YYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             CCCchhhhHHHHHHHHHH
Confidence            333456778777666554

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.50  E-value=2.3e-13  Score=136.92  Aligned_cols=204  Identities=14%  Similarity=0.071  Sum_probs=120.2

Q ss_pred             hccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       284 F~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      |..+..++||+|++|+||+|....+       |+.||||..+.........                       ......
T Consensus         1 ~~~~~~~~lg~g~~~~vy~~~~~~~-------~~~~a~K~~~~~~~~~~~~-----------------------~~~~~~   50 (272)
T cd06629           1 FKWVKGELIGKGTYGRVYLALNVTT-------GEMMAVKQVELPATIAGRH-----------------------DSRQKD   50 (272)
T ss_pred             CceeecceecccCceEEEEEeecCC-------Cceeeeeeeechhhhhccc-----------------------chHHHH
Confidence            4456678999999999999998764       6899999765331110000                       000000


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                      ..+      .+..|...+.++.     +++  +++.+  .......++||||++|.+|.+++..... .......++..+
T Consensus        51 ~~~------~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi  117 (272)
T cd06629          51 MVK------ALRSEIETLKDLD-----HLN--IVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQV  117 (272)
T ss_pred             HHH------HHHHHHHHHHhcC-----CCC--cceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHH
Confidence            001      2233444443331     222  22222  1223455899999999999998765321 111122344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..+|..|++|+|++|+||+++       .++      +++++|||++............   ........+.++|
T Consensus       118 ~~~-l~~lH~~~i~H~dl~~~nil~~-------~~~------~~~l~d~~~~~~~~~~~~~~~~---~~~~~~~~y~~PE  180 (272)
T cd06629         118 LEG-LAYLHSKGILHRDLKADNLLVD-------ADG------ICKISDFGISKKSDDIYDNDQN---MSMQGSVFWMAPE  180 (272)
T ss_pred             HHH-HHHHhhCCeeecCCChhhEEEc-------CCC------eEEEeecccccccccccccccc---ccccCCccccCHH
Confidence            444 6789999999999999999998       666      8999999998765432111000   0001112334455


Q ss_pred             HHHhhc-CCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLS-KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~-~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+..-. ......|.++|+..+.+++.+
T Consensus       181 ~~~~~~~~~~~~~Dv~slG~~l~~l~~g  208 (272)
T cd06629         181 VIHSYSQGYSAKVDIWSLGCVVLEMFAG  208 (272)
T ss_pred             HhccccCCCCccchhHHHHHHHHHHHhC
Confidence            543322 234457889988888888876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.50  E-value=1.8e-13  Score=143.64  Aligned_cols=186  Identities=14%  Similarity=0.116  Sum_probs=119.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||+|+.+.......                                    
T Consensus        10 ~~~lg~g~~g~V~~~~~~~~-------~~~~a~k~~~~~~~~~~------------------------------------   46 (333)
T cd06650          10 ISELGAGNGGVVFKVSHKPS-------GLIMARKLIHLEIKPAI------------------------------------   46 (333)
T ss_pred             eccccCCCCEEEEEEEECCC-------CcEEEEEEeecccCHHH------------------------------------
Confidence            46799999999999999764       68999998765432110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|.+.+.++.     ++++  ++.+.  ......+|||||++|.+|.+++..... .......++..++.+ +
T Consensus        47 --~~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~-l  116 (333)
T cd06650          47 --RNQIIRELQVLHECN-----SPYI--VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG-L  116 (333)
T ss_pred             --HHHHHHHHHHHHHCC-----CCcc--cceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence              012334554444331     2222  22221  123456899999999999998864221 111112333333333 6


Q ss_pred             HHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..+|. +|++|+|+||+|||++       .+|      .++|+|||++..+.......       ......+.+.|.+..
T Consensus       117 ~~lH~~~~ivH~dlkp~Nili~-------~~~------~~kL~Dfg~~~~~~~~~~~~-------~~~~~~y~aPE~~~~  176 (333)
T cd06650         117 TYLREKHKIMHRDVKPSNILVN-------SRG------EIKLCDFGVSGQLIDSMANS-------FVGTRSYMSPERLQG  176 (333)
T ss_pred             HHHHhcCCEEecCCChhhEEEc-------CCC------CEEEeeCCcchhhhhhcccc-------CCCCccccCHHHhcC
Confidence            67786 5899999999999998       667      89999999987664432111       112234667776643


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                       .......|.|+|+..+.+++.+.
T Consensus       177 -~~~~~~~DvwslG~il~~l~~g~  199 (333)
T cd06650         177 -THYSVQSDIWSMGLSLVEMAIGR  199 (333)
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHCC
Confidence             33445679999999999988763

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.50  E-value=1.1e-13  Score=142.68  Aligned_cols=195  Identities=16%  Similarity=0.087  Sum_probs=117.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+       ++.||||...++....                              ...    
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~-------~~~v~ik~~~~~~~~~------------------------------~~~----   44 (305)
T cd05609           6 IKLISNGAYGAVYLVRHKET-------RQRFAMKKINKQNLIL------------------------------RNQ----   44 (305)
T ss_pred             eeEeecCCCeeEEEEEECCC-------CcEEEEEEeehhhhhh------------------------------HHH----
Confidence            57899999999999999875       6899999765431000                              000    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCC--cEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP--AVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~--~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|.+.+.++     +++  .+++.+..+.+.  .++||||++|.+|.+++..... .......++..++. .+
T Consensus        45 --~~~~~~e~~~l~~~-----~~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~-~l  114 (305)
T cd05609          45 --IQQVFVERDILTFA-----ENP--FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVL-AL  114 (305)
T ss_pred             --HHHHHHHHHHHHhC-----CCC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHH-HH
Confidence              01223344333322     122  344555444444  3899999999999999865321 11112233333333 37


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHH---------HHH-HHHHhhcH
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV---------EFF-KAVARRDG  515 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~---------~l~-~Al~~~D~  515 (581)
                      ..+|..|++|+|+||+||+++       .+|      .++|+|||++..........+.         ... ........
T Consensus       115 ~~lH~~~i~H~dl~p~NIll~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (305)
T cd05609         115 EYLHNYGIVHRDLKPDNLLIT-------SMG------HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPE  181 (305)
T ss_pred             HHHHHCCccccCCchHHEEEC-------CCC------CEEEeeCCCccccCcCccccccccccccchhhccccCCccCcc
Confidence            889999999999999999998       667      8999999987531110000000         000 00011223


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +.+.|.+.. .......|.++|+..+.+++.+.
T Consensus       182 y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~  213 (305)
T cd05609         182 YIAPEVILR-QGYGKPVDWWAMGIILYEFLVGC  213 (305)
T ss_pred             ccCchhccC-CCCCchhhHHHHHHHHHHHHhCC
Confidence            455666544 33445679999999988887763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.50  E-value=1.2e-13  Score=140.00  Aligned_cols=188  Identities=18%  Similarity=0.097  Sum_probs=117.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       ++.||||+.......                                      
T Consensus         9 ~~~lg~g~~~~vy~~~~~~~-------~~~vaiK~~~~~~~~--------------------------------------   43 (277)
T cd06640           9 LERIGKGSFGEVFKGIDNRT-------QQVVAIKIIDLEEAE--------------------------------------   43 (277)
T ss_pred             hhhcccCCCeEEEEEEEccC-------CEEEEEEEEeccccH--------------------------------------
Confidence            35699999999999998764       689999986422100                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                      ...-++.+|...+.++.     ++  .+++.+..  .....++||||++|.+|.+++............++..++.+ +.
T Consensus        44 ~~~~~~~~e~~~l~~l~-----h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~-l~  115 (277)
T cd06640          44 DEIEDIQQEITVLSQCD-----SP--YVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKG-LD  115 (277)
T ss_pred             HHHHHHHHHHHHHHhCC-----CC--CEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHH-HH
Confidence            00123344544443331     22  22333322  23456899999999999998864222211122233333333 67


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|++|+||+++       .++      .++++|||++..+.......-     ......++.+.|.+.. .
T Consensus       116 ~lh~~~ivH~dl~p~Nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~y~apE~~~~-~  176 (277)
T cd06640         116 YLHSEKKIHRDIKAANVLLS-------EQG------DVKLADFGVAGQLTDTQIKRN-----TFVGTPFWMAPEVIQQ-S  176 (277)
T ss_pred             HHHhCCccCcCCChhhEEEc-------CCC------CEEEcccccceeccCCccccc-----cccCcccccCHhHhcc-C
Confidence            88999999999999999998       666      899999999977655332110     0112234455665432 2


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ......|.++|+..+.+++.+.
T Consensus       177 ~~~~~~Dv~slG~il~el~tg~  198 (277)
T cd06640         177 AYDSKADIWSLGITAIELAKGE  198 (277)
T ss_pred             CCccHHHHHHHHHHHHHHHHCC
Confidence            3334568888888888887663

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.50  E-value=1.6e-13  Score=139.80  Aligned_cols=190  Identities=14%  Similarity=0.075  Sum_probs=115.9

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      .||+|++|.||+|....+       |+.||||+.++.....-..                                    
T Consensus         1 ~lg~G~~g~Vy~~~~~~~-------~~~~aiK~~~~~~~~~~~~------------------------------------   37 (279)
T cd05633           1 IIGRGGFGEVYGCRKADT-------GKMYAMKCLDKKRIKMKQG------------------------------------   37 (279)
T ss_pred             CcccCCCeEEEEEEECCC-------CcEEEEEEEEccccccchH------------------------------------
Confidence            479999999999999764       6999999887642110000                                    


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       371 ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                      +..+.+|...+ ++... .+++.+  +..+..  .....++||||++|.+|.+++..... .......++..++.+ +..
T Consensus        38 ~~~~~~~~~~~-~~~~~-~~~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~a-l~~  112 (279)
T cd05633          38 ETLALNERIML-SLVST-GDCPFI--VCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILG-LEH  112 (279)
T ss_pred             HHHHHHHHHHH-HHHhh-CCCCcE--eEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-HHH
Confidence            00011111111 11110 112222  222222  22345799999999999988754221 112223344444444 788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      +|..|++|+|+||+||+++       .++      .++|+|||++..++.......       .....+.+.|.+..-..
T Consensus       113 lH~~~ivH~dikp~Nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~-------~~~~~y~aPE~~~~~~~  172 (279)
T cd05633         113 MHNRFVVYRDLKPANILLD-------EHG------HVRISDLGLACDFSKKKPHAS-------VGTHGYMAPEVLQKGTA  172 (279)
T ss_pred             HHHCCcCCCCCCHHHEEEC-------CCC------CEEEccCCcceeccccCccCc-------CCCcCccCHHHhcCCCC
Confidence            9999999999999999998       666      899999999876543322110       12334556666543223


Q ss_pred             CCCCCCHHHHHHHHHHhhhHh
Q 008021          528 QQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .....|.|+|+..+.+++.+.
T Consensus       173 ~~~~~Di~slG~~l~~l~~g~  193 (279)
T cd05633         173 YDSSADWFSLGCMLFKLLRGH  193 (279)
T ss_pred             CCchhhhHHHHHHHHHHHhCC
Confidence            345679999999999988763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.50  E-value=1.8e-13  Score=139.32  Aligned_cols=121  Identities=17%  Similarity=0.117  Sum_probs=83.1

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ..++||||++|.+|.+++..... .......++..++.+ +..+|..|++|+|++|.||+++       .++      .+
T Consensus        71 ~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~-l~~lH~~~i~H~di~p~nili~-------~~~------~~  136 (278)
T cd05606          71 KLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILG-LEHMHNRFVVYRDLKPANILLD-------EHG------HV  136 (278)
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHHCCEEcCCCCHHHEEEC-------CCC------CE
Confidence            45799999999999988754221 112223344444444 6789999999999999999998       666      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++..+........       .....+.+.|.+..-.......|.++++..+.+++.+
T Consensus       137 kl~dfg~~~~~~~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g  192 (278)
T cd05606         137 RISDLGLACDFSKKKPHAS-------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG  192 (278)
T ss_pred             EEccCcCccccCccCCcCc-------CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhC
Confidence            9999999876654332211       1233455666654333344567999999988888876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=3.6e-13  Score=137.57  Aligned_cols=188  Identities=17%  Similarity=0.136  Sum_probs=118.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|....+       ++.||||+........                                    -
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~------------------------------------~   41 (285)
T cd05605           5 YRVLGKGGFGEVCACQVRAT-------GKMYACKKLEKKRIKK------------------------------------R   41 (285)
T ss_pred             EEEEecCCCeEEEEEEEcCC-------CceEEEEEEehhhhhh------------------------------------h
Confidence            36799999999999998764       6999999865431000                                    0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                      ..+..+.+|...+.++.     ++++  +..+.  ......++||||++|++|.+++.....   .......++..++.+
T Consensus        42 ~~~~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~  114 (285)
T cd05605          42 KGEAMALNEKQILEKVN-----SRFV--VSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG  114 (285)
T ss_pred             hhHHHHHHHHHHHHhcC-----CCCE--eeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence            01223345555554432     1222  11221  122346899999999999987643211   111112233344443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|.||+++       .++      .++|+|||++..+.......      .......+.+.|.+.
T Consensus       115 -l~~lH~~~ivH~dlkp~Nil~~-------~~~------~~~l~Dfg~~~~~~~~~~~~------~~~~~~~y~aPE~~~  174 (285)
T cd05605         115 -LEDLHRERIVYRDLKPENILLD-------DYG------HIRISDLGLAVEIPEGETIR------GRVGTVGYMAPEVVK  174 (285)
T ss_pred             -HHHHHHCCcEecCCCHHHEEEC-------CCC------CEEEeeCCCceecCCCCccc------cccCCCCccCcHHhc
Confidence             6789999999999999999998       666      89999999988764332110      001122345566653


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . .......|.|+|+..+.+++.+
T Consensus       175 ~-~~~~~~~Diws~G~~l~el~~g  197 (285)
T cd05605         175 N-ERYTFSPDWWGLGCLIYEMIEG  197 (285)
T ss_pred             C-CCCCccccchhHHHHHHHHHHC
Confidence            3 3344567999999999998876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=1.5e-13  Score=137.19  Aligned_cols=196  Identities=13%  Similarity=0.025  Sum_probs=119.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|....+       |++||||+.+......                           +..       
T Consensus         7 ~~~lg~g~~~~vy~~~~~~~-------~~~~~lk~~~~~~~~~---------------------------~~~-------   45 (263)
T cd06625           7 GKLLGQGAFGRVYLCYDVDT-------GRELAVKQVPFDPDSP---------------------------ETK-------   45 (263)
T ss_pred             cceecCCCceEEEEEEEcCC-------CcEEEEEEEeecccch---------------------------hhH-------
Confidence            67999999999999998764       6999999876542110                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                      .+--++.+|...+.++.     ++++.-..-+.......++||||++|.+|.+++..... .......++..++.+ +..
T Consensus        46 ~~~~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-l~~  119 (263)
T cd06625          46 KEVNALECEIQLLKNLQ-----HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEG-VEY  119 (263)
T ss_pred             HHHHHHHHHHHHHHhCC-----CCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHH-HHH
Confidence            00012345555554331     23332211122223356799999999999998764221 112223445455544 678


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      +|..|++|+|++|+||+++       .++      +++|+|||++..+.........  .........+.+.|.+.. ..
T Consensus       120 lH~~~i~H~dl~p~nilv~-------~~~------~~~l~dfg~~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~  183 (263)
T cd06625         120 LHSNMIVHRDIKGANILRD-------SAG------NVKLGDFGASKRLQTICSSGTG--MKSVTGTPYWMSPEVISG-EG  183 (263)
T ss_pred             HHhCCeecCCCCHHHEEEc-------CCC------CEEEeecccceecccccccccc--ccCCCcCccccCcceecc-CC
Confidence            9999999999999999998       666      8999999998766442211100  000011123444444432 22


Q ss_pred             CCCCCCHHHHHHHHHHhhhH
Q 008021          528 QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....|.++++..+.+++.+
T Consensus       184 ~~~~~Di~slG~il~el~~g  203 (263)
T cd06625         184 YGRKADVWSVGCTVVEMLTE  203 (263)
T ss_pred             CCchhhhHHHHHHHHHHHhC
Confidence            34567888888888888876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.49  E-value=1.5e-13  Score=139.77  Aligned_cols=186  Identities=15%  Similarity=0.078  Sum_probs=114.7

Q ss_pred             ecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHH
Q 008021          292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ  371 (581)
Q Consensus       292 IgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~E  371 (581)
                      ||+|++|+||+++.+.+       |+.||+|+........   +                                 ..+
T Consensus         1 lg~G~~g~Vy~~~~~~~-------~~~~a~K~~~~~~~~~---~---------------------------------~~~   37 (277)
T cd05607           1 LGKGGFGEVCAVQVKNT-------GKMYACKKLDKKRLKK---K---------------------------------SGE   37 (277)
T ss_pred             CCCCCceEEEEEEEccC-------CcEEEEEEEcHHHhhc---c---------------------------------hhh
Confidence            68999999999999875       7999999864321000   0                                 000


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHHH
Q 008021          372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLK  446 (581)
Q Consensus       372 lDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l~  446 (581)
                      -.+..|...+.++     +++++.  +.+.  +.....++||||++|.+|.+++......   ......++..++.+ +.
T Consensus        38 ~~~~~E~~il~~l-----~hp~i~--~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~a-l~  109 (277)
T cd05607          38 KMALLEKEILEKV-----NSPFIV--NLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCG-IL  109 (277)
T ss_pred             HHHHHHHHHHHhc-----CCCcEE--EEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHH-HH
Confidence            0111233333322     122222  2221  2234568999999999998876432211   11112233344433 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|++|.||+++       .++      .++|+|||++..+.......      .......+.+.|.+... 
T Consensus       110 ~lH~~~ivH~dikp~Nili~-------~~~------~~~l~Dfg~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~-  169 (277)
T cd05607         110 HLHSMDIVYRDMKPENVLLD-------DQG------NCRLSDLGLAVELKDGKTIT------QRAGTNGYMAPEILKEE-  169 (277)
T ss_pred             HHHHCCEEEccCChHhEEEc-------CCC------CEEEeeceeeeecCCCceee------ccCCCCCccCHHHHccC-
Confidence            89999999999999999998       666      89999999987665422110      01122345667766443 


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ......|.++++..+.+++.+.
T Consensus       170 ~~~~~~DvwslGv~l~el~~g~  191 (277)
T cd05607         170 PYSYPVDWFAMGCSIYEMVAGR  191 (277)
T ss_pred             CCCCchhHHHHHHHHHHHHhCC
Confidence            3555679999999999988763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.49  E-value=1.3e-13  Score=143.13  Aligned_cols=190  Identities=17%  Similarity=0.103  Sum_probs=116.0

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+++....    ...|+.||||+.+.....                                     ..
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~----~~~~~~~aiK~~~~~~~~-------------------------------------~~   40 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITG----PDAGQLYAMKVLKKATLK-------------------------------------VR   40 (318)
T ss_pred             ceeeeCCCEEEEEEEEecc----CCCCCEEEEEEEEHHHhh-------------------------------------hh
Confidence            5689999999999986421    012699999986532100                                     00


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                      ....+.+|.+.+.++.     +++  +++.+..  .....++||||++|.+|.+++..... .......++..++.+ +.
T Consensus        41 ~~~~~~~E~~~l~~l~-----h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~-l~  112 (318)
T cd05582          41 DRVRTKMERDILAEVN-----HPF--IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA-LD  112 (318)
T ss_pred             hHHHHHHHHHHHHhCC-----CCC--cccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HH
Confidence            0112234554444331     222  2222222  22345799999999999988754221 112223344444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||.||+++       .+|      .++|+|||++...........     .....-.+.+.|.+.. .
T Consensus       113 ~lH~~~i~H~dlkp~Nil~~-------~~~------~~kL~Dfg~~~~~~~~~~~~~-----~~~g~~~y~aPE~~~~-~  173 (318)
T cd05582         113 HLHSLGIIYRDLKPENILLD-------EEG------HIKLTDFGLSKESIDHEKKAY-----SFCGTVEYMAPEVVNR-R  173 (318)
T ss_pred             HHHHCCEecCCCCHHHeEEC-------CCC------cEEEeeccCCcccCCCCCcee-----cccCChhhcCHHHHcC-C
Confidence            89999999999999999998       667      899999999876543321111     0111223455665543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.++|+..+.+++.+
T Consensus       174 ~~~~~~DiwslG~il~el~tg  194 (318)
T cd05582         174 GHTQSADWWSFGVLMFEMLTG  194 (318)
T ss_pred             CCCCccceeccceEeeeeccC
Confidence            334567999999888888766

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.49  E-value=1.7e-13  Score=149.80  Aligned_cols=121  Identities=16%  Similarity=0.112  Sum_probs=80.9

Q ss_pred             EEEEeccCCccHHHHHHhhh-c----chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCC
Q 008021          408 VLVETYEQGECVSRYVDELQ-G----HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP  482 (581)
Q Consensus       408 VLVmEyi~G~~L~~~l~~~~-~----~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~  482 (581)
                      ++||||++| ++.+++.... .    .......++..++.+ +..||..|++|||+||.|||++       .++     .
T Consensus       143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~g-L~yLH~~~IiHrDLKp~NILl~-------~~~-----~  208 (440)
T PTZ00036        143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRA-LAYIHSKFICHRDLKPQNLLID-------PNT-----H  208 (440)
T ss_pred             EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH-HHHHHHCCEecCCcCHHHEEEc-------CCC-----C
Confidence            489999987 5655553211 0    111122334444444 7889999999999999999998       332     1


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .++|+|||++..+.......      .....-.+.++|.+.....+....|.|+|+..+.+++.+.
T Consensus       209 ~vkL~DFGla~~~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~  268 (440)
T PTZ00036        209 TLKLCDFGSAKNLLAGQRSV------SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY  268 (440)
T ss_pred             ceeeeccccchhccCCCCcc------cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            69999999998765432211      0112334678888765445556789999999999999873

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.49  E-value=3.5e-13  Score=133.76  Aligned_cols=187  Identities=17%  Similarity=0.150  Sum_probs=112.6

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||.|++|.||+|...+        ++.||+|+.++.....                                      
T Consensus         1 ~~ig~g~~g~vy~~~~~~--------~~~~a~K~~~~~~~~~--------------------------------------   34 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKD--------KTPVAVKTCKEDLPQE--------------------------------------   34 (250)
T ss_pred             CccCCCCCceEEEEEecC--------CcEEEEEecCCcCCHH--------------------------------------
Confidence            468999999999998754        5899999876553211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALLKM  447 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l~~  447 (581)
                      .+.++.+|...+.++     +++++.-+..+.......++||||++|.+|.+++......  ......+...++.+ +..
T Consensus        35 ~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~-l~~  108 (250)
T cd05085          35 LKIKFLSEARILKQY-----DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAG-MAY  108 (250)
T ss_pred             HHHHHHHHHHHHHhC-----CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHH
Confidence            012344555555443     2333222222222334568999999999999987542221  11112233333333 678


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      +|..|++|+|++|+||+++       .++      .++|+|||++..........-. . .  ...-.+.++|.+ ..+.
T Consensus       109 lH~~~~~H~dl~p~nili~-------~~~------~~~l~d~g~~~~~~~~~~~~~~-~-~--~~~~~y~aPE~~-~~~~  170 (250)
T cd05085         109 LESKNCIHRDLAARNCLVG-------ENN------VLKISDFGMSRQEDDGIYSSSG-L-K--QIPIKWTAPEAL-NYGR  170 (250)
T ss_pred             HHhCCeeecccChheEEEc-------CCC------eEEECCCccceeccccccccCC-C-C--CCcccccCHHHh-ccCC
Confidence            8999999999999999998       666      8999999988654332110000 0 0  000123445544 2233


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 008021          528 QQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~  546 (581)
                      .....|.++|+..+.+++.
T Consensus       171 ~~~~~Di~slG~ll~~~~~  189 (250)
T cd05085         171 YSSESDVWSYGILLWETFS  189 (250)
T ss_pred             CCchhHHHHHHHHHHHHhc
Confidence            3445678888777777765

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.49  E-value=3.3e-13  Score=136.80  Aligned_cols=195  Identities=19%  Similarity=0.147  Sum_probs=118.7

Q ss_pred             hhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       280 ~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      ++++|..  .+.||+|++|.||+|....+       ++.||||+.......                             
T Consensus         2 ~~~~~~~--~~~ig~G~~~~vy~~~~~~~-------~~~~aiK~~~~~~~~-----------------------------   43 (277)
T cd06641           2 PEELFTK--LEKIGKGSFGEVFKGIDNRT-------QKVVAIKIIDLEEAE-----------------------------   43 (277)
T ss_pred             HHHhhhh--heeEeecCCeEEEEEEECCC-------CcEEEEEEeccccch-----------------------------
Confidence            4556653  35699999999999998654       689999985422100                             


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHH
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA  437 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la  437 (581)
                               ...-++.+|...+.++.     ++++  .+.+  .......++||||++|.++.+++............++
T Consensus        44 ---------~~~~~~~~e~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~  107 (277)
T cd06641          44 ---------DEIEDIQQEITVLSQCD-----SPYV--TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL  107 (277)
T ss_pred             ---------HHHHHHHHHHHHHHhcC-----CCCE--eEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHH
Confidence                     00123444555444332     2222  2222  1223456899999999999998864322222223344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..+|..|++|+|++|+||+++       .+|      .++++|||++..+.......     .......++.
T Consensus       108 ~~l~~~-l~~lh~~~i~h~dl~p~Ni~i~-------~~~------~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~y~  168 (277)
T cd06641         108 REILKG-LDYLHSEKKIHRDIKAANVLLS-------EHG------EVKLADFGVAGQLTDTQIKR-----NTFVGTPFWM  168 (277)
T ss_pred             HHHHHH-HHHHccCCeecCCCCHHhEEEC-------CCC------CEEEeecccceecccchhhh-----ccccCCcccc
Confidence            444443 6788999999999999999998       666      89999999987765432111     0011122334


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +.|.+.. .......|.++|+..+.+++.+.
T Consensus       169 ~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~  198 (277)
T cd06641         169 APEVIKQ-SAYDSKADIWSLGITAIELAKGE  198 (277)
T ss_pred             Chhhhcc-CCCCchhhHHHHHHHHHHHHcCC
Confidence            4444322 23334567888888887777663

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.48  E-value=1.2e-13  Score=138.74  Aligned_cols=198  Identities=17%  Similarity=0.177  Sum_probs=119.5

Q ss_pred             ChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       279 ~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      +++..|+.  .+.||.|++|+||+|....+       ++.||||+....-..                            
T Consensus         3 ~~~~~y~~--~~~lg~g~~g~vy~~~~~~~-------~~~~aik~~~~~~~~----------------------------   45 (272)
T cd06637           3 DPAGIFEL--VELVGNGTYGQVYKGRHVKT-------GQLAAIKVMDVTGDE----------------------------   45 (272)
T ss_pred             ChhhhhhH--HHheeecCCeEEEEEEEcCC-------CcEEEEEEEEcCCcc----------------------------
Confidence            34455543  35799999999999999764       699999986432100                            


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcc-cccccc-----cCCCCcEEEEeccCCccHHHHHHhhhcc---
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVY-----PLVHPAVLVETYEQGECVSRYVDELQGH---  429 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~-----~l~t~~VLVmEyi~G~~L~~~l~~~~~~---  429 (581)
                                  +.++..|...+.++.    +++++. +...+.     ......+++|||++|.+|.+++......   
T Consensus        46 ------------~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~  109 (272)
T cd06637          46 ------------EEEIKQEINMLKKYS----HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK  109 (272)
T ss_pred             ------------HHHHHHHHHHHHHhc----CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCC
Confidence                        011222333333221    111111 111110     0112346999999999999988653211   


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA  509 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~A  509 (581)
                      ......++..++.+ +..||..|++|+|+||+||+++       .++      .++|+|||++..+.......     ..
T Consensus       110 ~~~~~~~~~qi~~~-l~~LH~~~ivh~dl~~~nili~-------~~~------~~~l~Dfg~~~~~~~~~~~~-----~~  170 (272)
T cd06637         110 EEWIAYICREILRG-LSHLHQHKVIHRDIKGQNVLLT-------ENA------EVKLVDFGVSAQLDRTVGRR-----NT  170 (272)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHCCCccCCCCHHHEEEC-------CCC------CEEEccCCCceecccccccC-----Cc
Confidence            11112244444443 7889999999999999999998       666      89999999988664432111     11


Q ss_pred             HHhhcHHHHHHHHHhh----cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          510 VARRDGRTAAECTLRL----SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       510 l~~~D~~~~~e~ll~l----~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ......+.+.|.+...    .......|.++|+..+.+++.+.
T Consensus       171 ~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~  213 (272)
T cd06637         171 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA  213 (272)
T ss_pred             ccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            1122345666666422    22334679999999999988763

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.48  E-value=5.4e-13  Score=132.46  Aligned_cols=189  Identities=14%  Similarity=0.055  Sum_probs=119.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.|++|.....-..  .                                   
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~--~-----------------------------------   40 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKAD-------KRVYAMKQIDLSKMN--R-----------------------------------   40 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCC-------CcEEEEEEeehhhCC--H-----------------------------------
Confidence            46799999999999999764       699999975432100  0                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcchhhH---HHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGHERLK---SALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~---~~la~~~i~a  443 (581)
                      ...-++.+|.+.+.++.     +++  +.+.+..  .....++||||++|.+|.+++..........   ..++..++.+
T Consensus        41 ~~~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~a  113 (256)
T cd08529          41 REREEAIDEARVLAKLD-----SSY--IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG  113 (256)
T ss_pred             HHHHHHHHHHHHHHhcC-----CCC--eehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            00122334444443331     222  1222211  1234589999999999999986532211111   2334344444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|.||+++       .++      .++|.|||++..+.......     ........+.+.|...
T Consensus       114 -l~~lH~~~i~h~dl~~~nili~-------~~~------~~~l~df~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~  174 (256)
T cd08529         114 -LAHLHSKKILHRDIKSLNLFLD-------AYD------NVKIGDLGVAKLLSDNTNFA-----NTIVGTPYYLSPELCE  174 (256)
T ss_pred             -HHHHHHCCcccCCCCcceEEEe-------CCC------CEEEcccccceeccCccchh-----hccccCccccCHHHhc
Confidence             6788999999999999999999       666      89999999988775432211     1112233455666554


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      . +......|.++|+..+.+++.+.
T Consensus       175 ~-~~~~~~~Di~slG~il~~l~~g~  198 (256)
T cd08529         175 D-KPYNEKSDVWALGVVLYECCTGK  198 (256)
T ss_pred             C-CCCCCccchHHHHHHHHHHHhCC
Confidence            3 33445679999999999998773

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.48  E-value=1.3e-13  Score=139.84  Aligned_cols=119  Identities=19%  Similarity=0.133  Sum_probs=80.7

Q ss_pred             cEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          407 AVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      -+++|||++| ++.+++......   ......++..++.+ +..+|..|++|+|+||+||+++       .+|      .
T Consensus        82 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~a-l~~lH~~~ivH~dikp~Nili~-------~~~------~  146 (288)
T cd07863          82 VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRG-LDFLHANCIVHRDLKPENILVT-------SGG------Q  146 (288)
T ss_pred             EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEC-------CCC------C
Confidence            4799999987 677776542211   11223344444444 7889999999999999999998       666      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++..++......      .......+.++|.+.. +......|.|+++..+.+++.+
T Consensus       147 ~kl~dfg~~~~~~~~~~~~------~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g  203 (288)
T cd07863         147 VKLADFGLARIYSCQMALT------PVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRR  203 (288)
T ss_pred             EEECccCccccccCcccCC------CccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhC
Confidence            9999999987664322110      0111234567776644 3345577999999999998866

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.48  E-value=1.3e-13  Score=136.80  Aligned_cols=191  Identities=16%  Similarity=0.075  Sum_probs=114.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       ++.|+||+....-....                        ..+..    +.+
T Consensus         5 ~~~ig~g~~~~vy~~~~~~~-------~~~~~ik~~~~~~~~~~------------------------~~~~~----~~~   49 (258)
T cd06632           5 GELLGSGSFGSVYEGLNLDD-------GDFFAVKEVSLADDGQT------------------------GQEAV----KQL   49 (258)
T ss_pred             cceeeecCCceEEEEEEcCC-------CcEEEEEEEEEcccccc------------------------chHHH----HHH
Confidence            57899999999999999754       68999998754311100                        00111    111


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                      .      +|..-+.++.     +++  +++.+.  ......+++|||++|.+|.+++..... .......++..++.+ +
T Consensus        50 ~------~e~~~l~~~~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~-l  115 (258)
T cd06632          50 E------QEIALLSKLQ-----HPN--IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLG-L  115 (258)
T ss_pred             H------HHHHHHHhcC-----CCC--chheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence            2      2322222221     111  111111  112345799999999999999865321 112222344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|+||+++       .++      .++|+|||++..+.......      .......+.++|.+..-
T Consensus       116 ~~lH~~~i~H~dl~~~ni~~~-------~~~------~~kl~d~~~~~~~~~~~~~~------~~~~~~~y~~pe~~~~~  176 (258)
T cd06632         116 EYLHDRNTVHRDIKGANILVD-------TNG------VVKLADFGMAKQVVEFSFAK------SFKGSPYWMAPEVIAQQ  176 (258)
T ss_pred             HHHHHCCcccCCCCHHHEEEC-------CCC------CEEEccCccceecccccccc------ccCCCcceeCHHHhcCC
Confidence            788999999999999999998       666      89999999988765433100      01111223445554332


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       177 ~~~~~~~D~~slG~~l~~l~~g  198 (258)
T cd06632         177 GGYGLAADIWSLGCTVLEMATG  198 (258)
T ss_pred             CCCCchhhhHHHHHHHHHHHhC
Confidence            2244457888888888888765

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.48  E-value=1.9e-13  Score=143.87  Aligned_cols=208  Identities=21%  Similarity=0.168  Sum_probs=120.1

Q ss_pred             HHHhCCChhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccc
Q 008021          273 ERAFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA  351 (581)
Q Consensus       273 e~elG~~~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~  351 (581)
                      ++|.+..+.++-..|. .++||+|++|.||+|....+       |+.||||+.+......                    
T Consensus         3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~--------------------   55 (343)
T cd07880           3 RQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRT-------GAKVAIKKLYRPFQSE--------------------   55 (343)
T ss_pred             hhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCC-------CcEEEEEEecccccch--------------------
Confidence            4455555555555554 67999999999999998764       6999999865431100                    


Q ss_pred             ccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch
Q 008021          352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIY-NFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE  430 (581)
Q Consensus       352 l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~-~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~  430 (581)
                                 ....      .+.+|...+.++.. +.-....+..+..........++||||+ |.++.+++.......
T Consensus        56 -----------~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~  117 (343)
T cd07880          56 -----------LFAK------RAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHEKLSE  117 (343)
T ss_pred             -----------HHHH------HHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhcCCCCH
Confidence                       0001      12233333333211 0000000111111111122347999999 778888775422222


Q ss_pred             hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          431 RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       431 ~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      .....++..++.+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+...... +       
T Consensus       118 ~~~~~i~~qi~~a-l~~LH~~gi~H~dlkp~Nill~-------~~~------~~kl~dfg~~~~~~~~~~~-~-------  175 (343)
T cd07880         118 DRIQFLVYQMLKG-LKYIHAAGIIHRDLKPGNLAVN-------EDC------ELKILDFGLARQTDSEMTG-Y-------  175 (343)
T ss_pred             HHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEc-------CCC------CEEEeecccccccccCccc-c-------
Confidence            2223344445444 7889999999999999999998       666      8999999998766432110 0       


Q ss_pred             HhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       511 ~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....+.+.|.+..........|.++++..+.+++.+
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g  212 (343)
T cd07880         176 VVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTG  212 (343)
T ss_pred             ccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            0112234455554323333456788888887777765

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.48  E-value=2.7e-13  Score=136.06  Aligned_cols=187  Identities=16%  Similarity=0.055  Sum_probs=116.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+.......                                    
T Consensus        14 ~~~lg~g~~g~vy~~~~~~~-------~~~~aik~~~~~~~~~~------------------------------------   50 (267)
T cd06646          14 IQRVGSGTYGDVYKARNLHT-------GELAAVKIIKLEPGDDF------------------------------------   50 (267)
T ss_pred             hheeecCCCeEEEEEEECCC-------CeEEEEEEEecCccchH------------------------------------
Confidence            57899999999999998764       69999999765421100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         ..+.+|+..+.++     +++++  ++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        51 ---~~~~~e~~~l~~~-----~h~~i--i~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~-l  119 (267)
T cd06646          51 ---SLIQQEIFMVKEC-----KHCNI--VAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQG-L  119 (267)
T ss_pred             ---HHHHHHHHHHHhc-----CCCCe--eeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               0123344433332     12222  22221  122345789999999999998754221 111223344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh-
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR-  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~-  524 (581)
                      ..+|..|++|+|++|+||+++       .++      .++|+|||++..+........     .......+.+.|.+.. 
T Consensus       120 ~~lH~~~i~H~dl~p~nill~-------~~~------~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~y~~PE~~~~~  181 (267)
T cd06646         120 AYLHSKGKMHRDIKGANILLT-------DNG------DVKLADFGVAAKITATIAKRK-----SFIGTPYWMAPEVAAVE  181 (267)
T ss_pred             HHHHHCCccccCCCHHHEEEC-------CCC------CEEECcCccceeecccccccC-----ccccCccccCHhHcccc
Confidence            788999999999999999998       666      899999999987643221100     0011223455565432 


Q ss_pred             -hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 -LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 -l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .+......|.|+|+..+.+++.+
T Consensus       182 ~~~~~~~~~Dvws~G~il~el~~g  205 (267)
T cd06646         182 KNGGYNQLCDIWAVGITAIELAEL  205 (267)
T ss_pred             cCCCCcchhhHHHHHHHHHHHHhC
Confidence             12233467999999999888765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.48  E-value=5e-14  Score=154.79  Aligned_cols=197  Identities=19%  Similarity=0.164  Sum_probs=134.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC------chhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG------VGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~------v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      .+.+|.||-|.|-.|++..|       |+.+||||....      ....|++++.||+.+.+     |            
T Consensus        17 gkTLG~Gstg~vrlakh~~T-------GqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H-----p------------   72 (786)
T KOG0588|consen   17 GKTLGKGSTGCVRLAKHAET-------GQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH-----P------------   72 (786)
T ss_pred             cccccCCCCceehhhhcccc-------cceeEEEeeccccccccccccchhhhhHHHHHhcC-----C------------
Confidence            57899999999999999987       899999997543      23456666666664321     1            


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGT  441 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i  441 (581)
                                       |.-++.             -+|+-...-+||.||++|+-|-+++-..+.. .......-.+++
T Consensus        73 -----------------nVl~Ly-------------dVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi  122 (786)
T KOG0588|consen   73 -----------------NVLRLY-------------DVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQIL  122 (786)
T ss_pred             -----------------Ceeeee-------------eeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHH
Confidence                             111111             1233334457999999999999987553221 111222333333


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccc-ccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA-ELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~-~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      .. +..+|..||+|||+||.|+|++       ..+      .|++.||||+. +.+...-++-|       -.-.|.+.|
T Consensus       123 ~g-v~yCH~~~icHRDLKpENlLLd-------~~~------nIKIADFGMAsLe~~gklLeTSC-------GSPHYA~PE  181 (786)
T KOG0588|consen  123 DG-VSYCHAFNICHRDLKPENLLLD-------VKN------NIKIADFGMASLEVPGKLLETSC-------GSPHYAAPE  181 (786)
T ss_pred             HH-HHHHhhhcceeccCCchhhhhh-------ccc------CEeeeccceeecccCCccccccC-------CCcccCCch
Confidence            33 6678899999999999999999       555      79999999987 44444455544       223567777


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSA  560 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~  560 (581)
                      .+......+...|+|.=+-.+..|+.+.  |.+.++..|+-.
T Consensus       182 IV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlK  223 (786)
T KOG0588|consen  182 IVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLK  223 (786)
T ss_pred             hhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHH
Confidence            7766666666789999888888888884  566666666543

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.47  E-value=3.2e-13  Score=137.92  Aligned_cols=191  Identities=16%  Similarity=0.102  Sum_probs=116.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+..+.....                                    -
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~-------~~~~aiK~~~~~~~~~------------------------------------~   41 (285)
T cd05632           5 YRVLGKGGFGEVCACQVRAT-------GKMYACKRLEKKRIKK------------------------------------R   41 (285)
T ss_pred             EEEEecCCCeEEEEEEECCC-------CcEEEEEEeehhhhhh------------------------------------h
Confidence            36799999999999999765       6999999865431000                                    0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~l  445 (581)
                      ..+..+.+|.+.+.++.     ++++....-........+++|||++|.+|.+++.....   .......++..++.+ +
T Consensus        42 ~~~~~~~~E~~il~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~-l  115 (285)
T cd05632          42 KGESMALNEKQILEKVN-----SQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG-L  115 (285)
T ss_pred             hHHHHHHHHHHHHHHcC-----CcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHH-H
Confidence            00112334555554432     12221111111122345799999999999987743221   111122344444443 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||+||+++       .++      .++|+|||++..++......      .......+.+.|.+.. 
T Consensus       116 ~~lH~~~iiH~dikp~Nili~-------~~~------~~kl~Dfg~~~~~~~~~~~~------~~~g~~~~~aPE~~~~-  175 (285)
T cd05632         116 EDLHRENTVYRDLKPENILLD-------DYG------HIRISDLGLAVKIPEGESIR------GRVGTVGYMAPEVLNN-  175 (285)
T ss_pred             HHHHhCCeeecCCCHHHEEEC-------CCC------CEEEecCCcceecCCCCccc------CCCCCcCccChHHhcC-
Confidence            789999999999999999998       566      89999999887654322110      0111223455665533 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .......|.+.|+..+.+++.+.
T Consensus       176 ~~~~~~~Di~slG~~l~~l~~g~  198 (285)
T cd05632         176 QRYTLSPDYWGLGCLIYEMIEGQ  198 (285)
T ss_pred             CCCCcccchHHHHHHHHHHHhCC
Confidence            33444568888888888887663

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.47  E-value=2.9e-13  Score=143.09  Aligned_cols=191  Identities=19%  Similarity=0.122  Sum_probs=112.8

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ..+. .+.||+|++|.||+|+...+       |+.||||+.........                           .   
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~---------------------------~---   63 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVL-------GINVAVKKLSRPFQNQT---------------------------H---   63 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCC-------CceeEEEEecccccchh---------------------------H---
Confidence            3344 58999999999999998764       79999998754311100                           0   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCc-ccccccc-----cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVY-----PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA  437 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~-----~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la  437 (581)
                             ...+.+|...+..+.     ++++ .+...+.     +.....++||||++|.. .+.+.. .........++
T Consensus        64 -------~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l-~~~~~~-~~~~~~~~~~~  129 (359)
T cd07876          64 -------AKRAYRELVLLKCVN-----HKNIISLLNVFTPQKSLEEFQDVYLVMELMDANL-CQVIHM-ELDHERMSYLL  129 (359)
T ss_pred             -------HHHHHHHHHHHHhCC-----CCCEeeeeeeeccCCCccccceeEEEEeCCCcCH-HHHHhc-cCCHHHHHHHH
Confidence                   001122332222221     1111 1111110     11123479999998854 333322 11111122344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..||..|++|+|+||.||+++       .+|      .++|+|||++.........      ........+.
T Consensus       130 ~qi~~~-L~~LH~~~ivHrDlkp~NIl~~-------~~~------~~kl~Dfg~a~~~~~~~~~------~~~~~t~~y~  189 (359)
T cd07876         130 YQMLCG-IKHLHSAGIIHRDLKPSNIVVK-------SDC------TLKILDFGLARTACTNFMM------TPYVVTRYYR  189 (359)
T ss_pred             HHHHHH-HHHHHhCCcccCCCCHHHEEEC-------CCC------CEEEecCCCccccccCccC------CCCcccCCCC
Confidence            444433 7889999999999999999998       677      8999999998764332110      0011123456


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|.+.. .......|.++++..+.+++.+
T Consensus       190 aPE~~~~-~~~~~~~DiwSlG~il~el~tg  218 (359)
T cd07876         190 APEVILG-MGYKENVDIWSVGCIMGELVKG  218 (359)
T ss_pred             CchhccC-CCCCcchhhHHHHHHHHHHHhC
Confidence            6776644 3344567999999999999877

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=9.2e-14  Score=150.61  Aligned_cols=214  Identities=21%  Similarity=0.210  Sum_probs=129.8

Q ss_pred             hCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEec-CCchhhHHHHHHHHHHHHHHhcccccccc
Q 008021          276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH-PGVGESIRRDFVIINLAAKISSVIPAVKW  354 (581)
Q Consensus       276 lG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~-P~v~~~i~~Dl~il~~la~~~~~~p~l~~  354 (581)
                      +..+++.+|.++  .-||-||||-||-|++..+       .+.||||-.. .|-                          
T Consensus        20 ~k~DPEklf~dL--rEIGHGSFGAVYfArd~~n-------~evVAIKKMsySGK--------------------------   64 (948)
T KOG0577|consen   20 FKDDPEKLFSDL--REIGHGSFGAVYFARDVRN-------SEVVAIKKMSYSGK--------------------------   64 (948)
T ss_pred             ccCCHHHHHHHH--HHhcCCccceeEEeeccCc-------cceeeeeecccccc--------------------------
Confidence            356788888744  5599999999999999875       6999999532 221                          


Q ss_pred             cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHH
Q 008021          355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKS  434 (581)
Q Consensus       355 l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~  434 (581)
                          ...+.+. -+..|+.|.+..+           +++..--+-.+--.+..+||||||=| +-+|+++-...+ ....
T Consensus        65 ----Qs~EKWq-DIlKEVrFL~~l~-----------HPntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKp-lqEv  126 (948)
T KOG0577|consen   65 ----QSNEKWQ-DILKEVRFLRQLR-----------HPNTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKP-LQEV  126 (948)
T ss_pred             ----ccHHHHH-HHHHHHHHHHhcc-----------CCCcccccceeeccchHHHHHHHHhc-cHHHHHHHHhcc-chHH
Confidence                1111111 1233444444322           11111000011112445799999987 456665432211 1123


Q ss_pred             HHHHHHHHH--HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh
Q 008021          435 ALAHIGTHA--LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR  512 (581)
Q Consensus       435 ~la~~~i~a--~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~  512 (581)
                      +||.+...+  .|..||.++.||||+|.||||++       +.|      .|+|.|||.+.-.++.+.  |       +-
T Consensus       127 EIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs-------e~g------~VKLaDFGSAsi~~PAns--F-------vG  184 (948)
T KOG0577|consen  127 EIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS-------EPG------LVKLADFGSASIMAPANS--F-------VG  184 (948)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHhhhccccceEec-------CCC------eeeeccccchhhcCchhc--c-------cC
Confidence            444443332  38889999999999999999999       777      899999999988777542  2       22


Q ss_pred             hcHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHhhhH----------------------hhccccHHHHHHHHHHH
Q 008021          513 RDGRTAAECTLRL--SKQQNCPNPKAFIEWMRLLPSG----------------------VLRRVIWSILLSACSNY  564 (581)
Q Consensus       513 ~D~~~~~e~ll~l--~~~~~~~D~~~f~~~l~~l~~~----------------------~~~~~~~~~ll~~~~~~  564 (581)
                      .-|--++++++.|  |.++...|+|.++-.--+|..+                      .++...|++-|......
T Consensus       185 TPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~  260 (948)
T KOG0577|consen  185 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDS  260 (948)
T ss_pred             CccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHH
Confidence            3333456777666  4455667777764332232211                      36777888877665554

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.47  E-value=1.9e-13  Score=147.29  Aligned_cols=180  Identities=14%  Similarity=0.020  Sum_probs=112.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       ++.||||+....   .                                     
T Consensus        97 ~~~lg~G~~g~V~~~~d~~~-------~~~vaiK~~~~~---~-------------------------------------  129 (391)
T PHA03212         97 LETFTPGAEGFAFACIDNKT-------CEHVVIKAGQRG---G-------------------------------------  129 (391)
T ss_pred             EEEEcCCCCeEEEEEEECCC-------CCEEEEechhhh---h-------------------------------------
Confidence            47799999999999999875       799999952210   0                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                           +.+|++.+.++.     +++|  .+.+.  ......++|||++.| .|.+++..... .......++..++.+ +
T Consensus       130 -----~~~E~~il~~l~-----HpnI--v~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~l~~~~~~~i~~qi~~a-L  195 (391)
T PHA03212        130 -----TATEAHILRAIN-----HPSI--IQLKGTFTYNKFTCLILPRYKT-DLYCYLAAKRNIAICDILAIERSVLRA-I  195 (391)
T ss_pred             -----hHHHHHHHHhCC-----CCCC--CCEeEEEEECCeeEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence                 123443333331     2222  22221  223445799999965 56666543211 111123344444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||+|||++       .+|      .++|+|||++...........    ......-.+.+.|.+.. 
T Consensus       196 ~ylH~~~IvHrDiKP~NIll~-------~~~------~vkL~DFG~a~~~~~~~~~~~----~~~~gt~~y~aPE~~~~-  257 (391)
T PHA03212        196 QYLHENRIIHRDIKAENIFIN-------HPG------DVCLGDFGAACFPVDINANKY----YGWAGTIATNAPELLAR-  257 (391)
T ss_pred             HHHHhCCcccCCCChHhEEEc-------CCC------CEEEEeCCccccccccccccc----ccccCccCCCChhhhcC-
Confidence            889999999999999999998       666      899999999865432211111    01112233456666543 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+|+..+.+++.+
T Consensus       258 ~~~~~~~DiwSlGvil~elltg  279 (391)
T PHA03212        258 DPYGPAVDIWSAGIVLFEMATC  279 (391)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHC
Confidence            3445567999999999999876

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.47  E-value=3.7e-13  Score=143.88  Aligned_cols=84  Identities=19%  Similarity=0.195  Sum_probs=59.0

Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh-hcHHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR-RDGRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~-~D~~~~~e~ll  523 (581)
                      +..+|..|++|+|+||.|||++       .++      .++|+|||++..+.........    .... ...+.++|.+.
T Consensus       227 l~~lH~~~ivH~Dlkp~Nill~-------~~~------~~kl~DfG~a~~~~~~~~~~~~----~~~~~~~~y~aPE~~~  289 (375)
T cd05104         227 MSFLASKNCIHRDLAARNILLT-------HGR------ITKICDFGLARDIRNDSNYVVK----GNARLPVKWMAPESIF  289 (375)
T ss_pred             HHHHHHCCeeccCCchhhEEEE-------CCC------cEEEecCccceeccCccccccc----CCCCCCcceeChhHhc
Confidence            7789999999999999999998       555      8999999999876543221100    0000 01245666654


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      . +......|.++|+..+.++++
T Consensus       290 ~-~~~~~~sDi~slG~~l~ellt  311 (375)
T cd05104         290 N-CVYTFESDVWSYGILLWEIFS  311 (375)
T ss_pred             C-CCCCCCCCHHHHHHHHHHHHh
Confidence            3 445557799999999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.46  E-value=3.6e-13  Score=140.86  Aligned_cols=204  Identities=17%  Similarity=0.119  Sum_probs=126.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.+|+|.+|.|-+|+.+..       |+.||||.++.+.-+ -+.|+.-+                             
T Consensus        58 ~etLGkGTYGKVk~A~e~~s-------gR~VAiKsIrKdkIk-deqDlvhI-----------------------------  100 (668)
T KOG0611|consen   58 TETLGKGTYGKVKLAYEHKS-------GREVAIKSIRKDKIK-DEQDLVHI-----------------------------  100 (668)
T ss_pred             HHHhcCCcccceeehhhccC-------CcEeehhhhhhhhcc-cHHHHHHH-----------------------------
Confidence            46799999999999999775       799999976654211 01222211                             


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l  445 (581)
                            ++|.+-+..+     +++++.  .+|.  +-..+-||||||..|+.|.+|+.+.... .+....+-++++.+ .
T Consensus       101 ------RREIeIMSsL-----NHPhII--~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSA-V  166 (668)
T KOG0611|consen  101 ------RREIEIMSSL-----NHPHII--QIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSA-V  166 (668)
T ss_pred             ------HHHHHHHhhc-----CCCcee--ehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHH-H
Confidence                  2222222111     122221  2222  2234458999999999999999763321 22223344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh-hHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT-DRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~-~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..+|.++++|||||-.|||++       .++      .+++.|||+.--..+. ....||.       .--|.-.|..-.
T Consensus       167 hYCHknrVvHRDLKLENILLD-------~N~------NiKIADFGLSNly~~~kfLqTFCG-------SPLYASPEIvNG  226 (668)
T KOG0611|consen  167 HYCHKNRVVHRDLKLENILLD-------QNN------NIKIADFGLSNLYADKKFLQTFCG-------SPLYASPEIVNG  226 (668)
T ss_pred             HHHhhccceecccchhheeec-------CCC------CeeeeccchhhhhccccHHHHhcC-------CcccCCccccCC
Confidence            678999999999999999999       556      8999999998755432 3334432       223344444444


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSN  563 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~  563 (581)
                      .-...+..|-|++.--+..|+-+.  |...+...|...+.+
T Consensus       227 ~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~  267 (668)
T KOG0611|consen  227 TPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISR  267 (668)
T ss_pred             CCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhc
Confidence            444456678899998888888773  555555555544443

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=1.3e-13  Score=147.19  Aligned_cols=186  Identities=20%  Similarity=0.216  Sum_probs=124.7

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|+ ..-||.|++|.||+|.+.+        |+.||||...++....                                 
T Consensus        76 ~Fs~~~~ig~Ggfg~VYkG~l~~--------~~~vAVK~~~~~~~~~---------------------------------  114 (361)
T KOG1187|consen   76 NFSESNLIGEGGFGTVYKGVLSD--------GTVVAVKRLSSNSGQG---------------------------------  114 (361)
T ss_pred             CCchhcceecCCCeEEEEEEECC--------CCEEEEEEecCCCCcc---------------------------------
Confidence            466 5789999999999999975        5899999766542110                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC---C-CcEEEEeccCCccHHHHHHhhhc---chhhHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV---H-PAVLVETYEQGECVSRYVDELQG---HERLKSALA  437 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~---t-~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la  437 (581)
                            +.+|.+|...+.+++     ++++.   .+..+|   . .++||.||++.++|.+.+.....   .=..+-.||
T Consensus       115 ------~~eF~~Ei~~ls~l~-----H~Nlv---~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa  180 (361)
T KOG1187|consen  115 ------EREFLNEVEILSRLR-----HPNLV---KLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIA  180 (361)
T ss_pred             ------hhHHHHHHHHHhcCC-----CcCcc---cEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHH
Confidence                  123666776666543     23332   122334   2 47999999999999998755322   112234566


Q ss_pred             HHHHHHHHHHhhhCC---eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH-hhHHHHHHHHHHHHhh
Q 008021          438 HIGTHALLKMLLVDN---FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK-TDRVNLVEFFKAVARR  513 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G---~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~-~~r~~l~~l~~Al~~~  513 (581)
                      .-.+++ +..||...   ++|||+||.|||++       .+.      +.++.|||++...+. +.......      .+
T Consensus       181 ~g~A~g-L~yLH~~~~~~iiHrDiKssNILLD-------~~~------~aKlsDFGLa~~~~~~~~~~~~~~------~g  240 (361)
T KOG1187|consen  181 LGAARG-LAYLHEGCPPPIIHRDIKSSNILLD-------EDF------NAKLSDFGLAKLGPEGDTSVSTTV------MG  240 (361)
T ss_pred             HHHHHH-HHHHccCCCCCEecCCCCHHHeeEC-------CCC------CEEccCccCcccCCccccceeeec------CC
Confidence            555554 78888754   99999999999999       666      899999999966654 22111000      23


Q ss_pred             c-HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          514 D-GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       514 D-~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . +|.+.|.. ..+......|+.+|+-.|-|++++
T Consensus       241 t~gY~~PEy~-~~g~lt~KsDVySFGVvllElitg  274 (361)
T KOG1187|consen  241 TFGYLAPEYA-STGKLTEKSDVYSFGVVLLELITG  274 (361)
T ss_pred             CCccCChhhh-ccCCcCcccccccchHHHHHHHhC
Confidence            3 34444444 336666778999999998888876

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.46  E-value=4.1e-13  Score=137.92  Aligned_cols=188  Identities=14%  Similarity=0.107  Sum_probs=113.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+       ++.||+|..+........                                   
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~-------~~~vaiK~~~~~~~~~~~-----------------------------------   48 (301)
T cd07873          11 LDKLGEGTYATVYKGRSKLT-------DNLVALKEIRLEHEEGAP-----------------------------------   48 (301)
T ss_pred             eeEeccCcCEEEEEEEEcCC-------CcEEEEEEEecccccCch-----------------------------------
Confidence            57899999999999998764       689999987543211100                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                         .++.+|...+.++.     ++++  ++.+.  ......++||||++| ++.+++......  ......++..++.+ 
T Consensus        49 ---~~~~~E~~~l~~l~-----h~nI--~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~a-  116 (301)
T cd07873          49 ---CTAIREVSLLKDLK-----HANI--VTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRG-  116 (301)
T ss_pred             ---hHHHHHHHHHHhcC-----CCCc--ceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHH-
Confidence               01122333333321     2222  22221  122345799999986 777776542211  11112233334443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||+||+++       .++      .++|+|||++..........     ..-.....+.++|.+..
T Consensus       117 L~~lH~~~i~H~dlkp~Nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~  178 (301)
T cd07873         117 LNYCHRRKVLHRDLKPQNLLIN-------ERG------ELKLADFGLARAKSIPTKTY-----SNEVVTLWYRPPDILLG  178 (301)
T ss_pred             HHHHHhCCeeCCCCCHHHEEEC-------CCC------cEEECcCcchhccCCCCCcc-----cccceeecccCcHHHhC
Confidence            7889999999999999999998       666      89999999987543222110     00011233455665544


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ........|.++|+..+.+++++.
T Consensus       179 ~~~~~~~~Dv~slG~~l~el~tg~  202 (301)
T cd07873         179 STDYSTQIDMWGVGCIFYEMSTGR  202 (301)
T ss_pred             CCCCccHHHHHHHHHHHHHHHhCC
Confidence            333444568999999998888773

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.46  E-value=5.5e-14  Score=153.24  Aligned_cols=190  Identities=18%  Similarity=0.174  Sum_probs=120.5

Q ss_pred             hhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          280 LSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       280 ~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      |+..++++. .++||+||||.||||.+.          -+||||+..-+-                     |      -+
T Consensus       387 WeIp~~ev~l~~rIGsGsFGtV~Rg~wh----------GdVAVK~Lnv~~---------------------p------t~  429 (678)
T KOG0193|consen  387 WEIPPEEVLLGERIGSGSFGTVYRGRWH----------GDVAVKLLNVDD---------------------P------TP  429 (678)
T ss_pred             cccCHHHhhccceeccccccceeecccc----------cceEEEEEecCC---------------------C------CH
Confidence            444444444 689999999999999996          279999865321                     0      01


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCC--CcEEEEeccCCccHHHHHHhhhcchhh--HH
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH--PAVLVETYEQGECVSRYVDELQGHERL--KS  434 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t--~~VLVmEyi~G~~L~~~l~~~~~~~~~--~~  434 (581)
                      +-.+.          |++|..++.+-++.     +|.   .+-.+++  +..+|..||+|-+|..++...+..-..  ..
T Consensus       430 ~qlqa----------FKnEVa~lkkTRH~-----NIl---LFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~i  491 (678)
T KOG0193|consen  430 EQLQA----------FKNEVAVLKKTRHE-----NIL---LFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTI  491 (678)
T ss_pred             HHHHH----------HHHHHHHHhhcchh-----hhe---eeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHH
Confidence            22222          46676666544321     111   1112222  226899999999999988643221111  23


Q ss_pred             HHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH---hhHH---HHHHHHH
Q 008021          435 ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK---TDRV---NLVEFFK  508 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~---~~r~---~l~~l~~  508 (581)
                      .||+..++. +..||..||||+|||.-||++.       +++      +|+|.|||+++.-+.   +...   ...-+| 
T Consensus       492 dIAqQiaqG-M~YLHAK~IIHrDLKSnNIFl~-------~~~------kVkIgDFGLatvk~~w~g~~q~~qp~gsilw-  556 (678)
T KOG0193|consen  492 DIAQQIAQG-MDYLHAKNIIHRDLKSNNIFLH-------EDL------KVKIGDFGLATVKTRWSGEQQLEQPHGSLLW-  556 (678)
T ss_pred             HHHHHHHHh-hhhhhhhhhhhhhccccceEEc-------cCC------cEEEecccceeeeeeeccccccCCCccchhh-
Confidence            466666554 7889999999999999999998       667      999999999874322   1111   111122 


Q ss_pred             HHHhhcHHHHHHHHH--hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          509 AVARRDGRTAAECTL--RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       509 Al~~~D~~~~~e~ll--~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                              -|+|++.  +--.+....|+++|+..+.||+.+
T Consensus       557 --------mAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg  589 (678)
T KOG0193|consen  557 --------MAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTG  589 (678)
T ss_pred             --------hcHHHHhhcccCCCCcccchhhhhHHHHHHHhC
Confidence                    2334332  223334467999999999999877

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=1.6e-13  Score=145.33  Aligned_cols=194  Identities=20%  Similarity=0.200  Sum_probs=129.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|.-|+||+|+...+       ++.||||+..                               |+.+-.++    
T Consensus        31 ~e~IG~G~sa~V~~A~c~p~-------~e~VAIK~in-------------------------------LEkc~~~l----   68 (516)
T KOG0582|consen   31 QEVIGVGASAVVYLARCIPT-------NEVVAIKIIN-------------------------------LEKCNNDL----   68 (516)
T ss_pred             EEEEeccceeEeeeeeeccc-------CCEEEEEEee-------------------------------hhhhhhhH----
Confidence            36799999999999999875       7999999742                               22111111    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHH--H
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA--L  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a--~  444 (581)
                         -++++|..++..+     ++++|.  +.+..+.  +.-++||.|+.|+++.+++...-..+-....++.++-+.  .
T Consensus        69 ---d~l~kE~~~msl~-----~HPNIv--~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lka  138 (516)
T KOG0582|consen   69 ---DALRKEVQTMSLI-----DHPNIV--TYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKA  138 (516)
T ss_pred             ---HHHHHHHHHhhhc-----CCCCcc--eEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHH
Confidence               1135566666433     233322  1111122  344789999999999999876322222223344333222  2


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH-HH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC-TL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~-ll  523 (581)
                      |..||.+|.||||+|+||||++       .+|      .|+|.|||....+-+.-.++-.++ ...+..-+.-++|. +.
T Consensus       139 L~YLH~~G~IHRdvKAgnILi~-------~dG------~VkLadFgvsa~l~~~G~R~~~rf-~tfvgtp~wmAPEvl~q  204 (516)
T KOG0582|consen  139 LDYLHQNGHIHRDVKAGNILID-------SDG------TVKLADFGVSASLFDSGDRQVTRF-NTFVGTPCWMAPEVLMQ  204 (516)
T ss_pred             HHHHHhcCceecccccccEEEc-------CCC------cEEEcCceeeeeecccCceeeEee-ccccCcccccChHHhhh
Confidence            7889999999999999999999       888      999999999887766543333343 44445556677787 45


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .+-.++-..|.|.|+-..-||..+.
T Consensus       205 ~~~GYdfKaDIwSfGITA~ELA~G~  229 (516)
T KOG0582|consen  205 QLHGYDFKADIWSFGITACELAHGH  229 (516)
T ss_pred             cccCccchhhhhhhhHHHHHHhcCC
Confidence            5555666789999988888887773

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.46  E-value=5.1e-13  Score=133.82  Aligned_cols=186  Identities=18%  Similarity=0.159  Sum_probs=114.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|....        ++.||||..+++-..                                      
T Consensus        11 ~~~lg~g~~~~v~~~~~~~--------~~~v~iK~~~~~~~~--------------------------------------   44 (261)
T cd05068          11 LRKLGAGQFGEVWEGLWNN--------TTPVAVKTLKPGTMD--------------------------------------   44 (261)
T ss_pred             EEEecccCCccEEEEEecC--------CeEEEEEeeCCCccc--------------------------------------
Confidence            4889999999999999754        478999987664110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l  445 (581)
                        +-++.+|...+.++.     ++++.-...+.......+++|||++|.+|.+++....+.   ......++..++.+ +
T Consensus        45 --~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~-l  116 (261)
T cd05068          45 --PKDFLAEAQIMKKLR-----HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASG-M  116 (261)
T ss_pred             --HHHHHHHHHHHHHCC-----CCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHH-H
Confidence              112344554444432     222211111222234568999999999999998643211   11122334444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||+||+++       .++      .++|+|||++..+...........    .....+.+.|.+. .
T Consensus       117 ~~lH~~~i~H~dl~p~Nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~~----~~~~~y~aPE~~~-~  178 (261)
T cd05068         117 AYLEAQNYIHRDLAARNVLVG-------ENN------ICKVADFGLARVIKEDIYEAREGA----KFPIKWTAPEAAL-Y  178 (261)
T ss_pred             HHHHhCCeeeccCCcceEEEc-------CCC------CEEECCcceEEEccCCcccccCCC----cCceeccCccccc-c
Confidence            788999999999999999999       666      899999999887653221111000    0001233444332 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.++|+..+.++++
T Consensus       179 ~~~~~~~Di~slG~~l~el~t  199 (261)
T cd05068         179 NRFSIKSDVWSFGILLTEIVT  199 (261)
T ss_pred             CCCCchhhHHHHHHHHHHHHh
Confidence            333445688888888888876

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.46  E-value=9.4e-13  Score=138.73  Aligned_cols=191  Identities=19%  Similarity=0.146  Sum_probs=116.9

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      +.|+ .++||+|++|.||+|....+       |+.||||+.........                               
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~~~~~-------~~~vaiK~~~~~~~~~~-------------------------------   58 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAFDTKT-------GLRVAVKKLSRPFQSII-------------------------------   58 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEEEcCC-------CeEEEEEEecCcchhhH-------------------------------
Confidence            3444 57999999999999998764       69999998765321100                               


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCc-cccccc-----ccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPV-----YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA  437 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~-----~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la  437 (581)
                            .+-.+.+|...+.++.     ++++ .+...+     .......+++|++. |.+|.+++....-.......++
T Consensus        59 ------~~~~~~~Ei~~l~~l~-----h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~  126 (345)
T cd07877          59 ------HAKRTYRELRLLKHMK-----HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI  126 (345)
T ss_pred             ------HHHHHHHHHHHHHHcC-----CCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHH
Confidence                  0011223444444332     1111 111111     01112346888886 7788887653222222223344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..+|..|++|+|+||.||+++       .+|      .++|+|||++.........        ......+.
T Consensus       127 ~qi~~a-L~~LH~~~ivH~dlkp~NIll~-------~~~------~~kl~dfg~~~~~~~~~~~--------~~~~~~y~  184 (345)
T cd07877         127 YQILRG-LKYIHSADIIHRDLKPSNLAVN-------EDC------ELKILDFGLARHTDDEMTG--------YVATRWYR  184 (345)
T ss_pred             HHHHHH-HHHHHHCCeeecCCChHHEEEc-------CCC------CEEEecccccccccccccc--------cccCCCcc
Confidence            444444 7889999999999999999998       667      8999999998765432211        01122345


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.|.+..........|.++|+..+.+++.+
T Consensus       185 aPE~~~~~~~~~~~~DvwslG~il~el~~g  214 (345)
T cd07877         185 APEIMLNWMHYNQTVDIWSVGCIMAELLTG  214 (345)
T ss_pred             CHHHHhCccCCCchhhHHHHHHHHHHHHhC
Confidence            666665434445567999999999998876

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.46  E-value=7.7e-13  Score=132.27  Aligned_cols=185  Identities=20%  Similarity=0.199  Sum_probs=116.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|..+.+       ++.||+|+...+.....                                    
T Consensus         6 ~~~ig~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~~------------------------------------   42 (265)
T cd06605           6 LGELGAGNSGVVSKVLHRPT-------GKIMAVKTIRLEINEAI------------------------------------   42 (265)
T ss_pred             HHHhcCCCCeEEEEEEEcCC-------CcEEEEEEEecccChHH------------------------------------
Confidence            46799999999999999864       69999998765522110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        +-++.+|...+.++.     ++++  ++.+.  ......+++|||++|.+|.+++.....  .......++..++.+ 
T Consensus        43 --~~~~~~e~~~l~~~~-----~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~-  112 (265)
T cd06605          43 --QKQILRELDILHKCN-----SPYI--VGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKG-  112 (265)
T ss_pred             --HHHHHHHHHHHHHCC-----CCch--hhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHH-
Confidence              111222333232221     1111  11111  112345799999999999999865311  111223344444444 


Q ss_pred             HHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          445 LKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       445 l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                      +..+|. .|++|+|++|+||+++       .+|      .++|+|||.+..+.......       ......+.+.|.+.
T Consensus       113 l~~lH~~~~i~H~dl~~~ni~~~-------~~~------~~~l~d~g~~~~~~~~~~~~-------~~~~~~y~~PE~~~  172 (265)
T cd06605         113 LTYLHEKHKIIHRDVKPSNILVN-------SRG------QIKLCDFGVSGQLVNSLAKT-------FVGTSSYMAPERIQ  172 (265)
T ss_pred             HHHHcCCCCeecCCCCHHHEEEC-------CCC------CEEEeecccchhhHHHHhhc-------ccCChhccCHHHHc
Confidence            678899 9999999999999999       666      89999999987765443322       11122344455443


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . .......|.++|+..+.+++.+
T Consensus       173 ~-~~~~~~~Dv~slG~~l~~l~~g  195 (265)
T cd06605         173 G-NDYSVKSDIWSLGLSLIELATG  195 (265)
T ss_pred             C-CCCCchhhHHHHHHHHHHHHhC
Confidence            2 3344456888888888888775

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.45  E-value=4.5e-13  Score=135.81  Aligned_cols=190  Identities=17%  Similarity=0.157  Sum_probs=115.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.+|+|++|+||+|+...+       ++.||+|+....-..                                      
T Consensus        21 ~~~lg~g~~~~v~~~~~~~~-------~~~~a~K~~~~~~~~--------------------------------------   55 (282)
T cd06636          21 VEVVGNGTYGQVYKGRHVKT-------GQLAAIKVMDVTEDE--------------------------------------   55 (282)
T ss_pred             heeeccCCCeEEEEEEEcCC-------CcEEEEEEEecChHH--------------------------------------
Confidence            46899999999999999764       689999986432100                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc------cccccccCCCCcEEEEeccCCccHHHHHHhhhcch---hhHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS------FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE---RLKSALAHI  439 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~------vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~---~~~~~la~~  439 (581)
                        .-++..|...+.++.    +++++.      +.....+.....+++|||++|++|.+++.......   .....+...
T Consensus        56 --~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~q  129 (282)
T cd06636          56 --EEEIKLEINMLKKYS----HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICRE  129 (282)
T ss_pred             --HHHHHHHHHHHHHhc----CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHH
Confidence              011223333333331    122211      00000011233479999999999999886532211   111223333


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      ++.+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+.......     ........+.+.
T Consensus       130 i~~a-l~~LH~~~ivH~dl~~~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~y~aP  190 (282)
T cd06636         130 ILRG-LAHLHAHKVIHRDIKGQNVLLT-------ENA------EVKLVDFGVSAQLDRTVGRR-----NTFIGTPYWMAP  190 (282)
T ss_pred             HHHH-HHHHHHCCcccCCCCHHHEEEC-------CCC------CEEEeeCcchhhhhccccCC-----CcccccccccCH
Confidence            4433 7789999999999999999998       666      89999999987654322110     011123345666


Q ss_pred             HHHHh----hcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          520 ECTLR----LSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       520 e~ll~----l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      |.+..    ........|.|+|+..+.+++.+.
T Consensus       191 E~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~  223 (282)
T cd06636         191 EVIACDENPDATYDYRSDIWSLGITAIEMAEGA  223 (282)
T ss_pred             hhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence            66542    122334579999999999988763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.45  E-value=6.2e-13  Score=147.77  Aligned_cols=122  Identities=16%  Similarity=0.074  Sum_probs=81.0

Q ss_pred             EEEEeccCCccHHHHHHhhhcc-----hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCC
Q 008021          408 VLVETYEQGECVSRYVDELQGH-----ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP  482 (581)
Q Consensus       408 VLVmEyi~G~~L~~~l~~~~~~-----~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~  482 (581)
                      ++||||++|++|.+++......     ......++..++. .+..+|..|++|+||||.|||++       .++      
T Consensus       115 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~-aL~~lH~~~IiHrDLKP~NILl~-------~~~------  180 (496)
T PTZ00283        115 ALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLL-AVHHVHSKHMIHRDIKSANILLC-------SNG------  180 (496)
T ss_pred             EEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHH-HHHHHHhCCEecCCCCHHHEEEe-------CCC------
Confidence            5899999999999988542111     1111223333333 37889999999999999999998       667      


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++|+|||++..+.........   ....-...+.++|.+.. .......|.|+|+..+.+++.+
T Consensus       181 ~vkL~DFGls~~~~~~~~~~~~---~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG  241 (496)
T PTZ00283        181 LVKLGDFGFSKMYAATVSDDVG---RTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTL  241 (496)
T ss_pred             CEEEEecccCeecccccccccc---ccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHC
Confidence            8999999998765432211100   00111224566666643 3344567999999999998876

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.45  E-value=3.7e-13  Score=156.96  Aligned_cols=194  Identities=15%  Similarity=0.125  Sum_probs=118.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.+.+....                          +    ..    
T Consensus         7 i~~LGkGgfG~VYlA~d~~t-------g~~VAIK~I~~~l~~~--------------------------e----~~----   45 (932)
T PRK13184          7 IRLIGKGGMGEVYLAYDPVC-------SRRVALKKIREDLSEN--------------------------P----LL----   45 (932)
T ss_pred             EEEEecCCCEEEEEEEECCC-------CcEEEEEEECcccccC--------------------------H----HH----
Confidence            57899999999999998765       7999999876542210                          0    00    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcch------------hhHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHE------------RLKS  434 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~------------~~~~  434 (581)
                        +-+|.+|++.+.++.     ++++  ++.+.  ......++||||++|++|.+++.......            ....
T Consensus        46 --~~rflrEi~ILs~L~-----HPNI--Vkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL  116 (932)
T PRK13184         46 --KKRFLREAKIAADLI-----HPGI--VPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFL  116 (932)
T ss_pred             --HHHHHHHHHHHHhCC-----CcCc--CeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHH
Confidence              112344555444331     2222  22221  12334589999999999999886421100            0011


Q ss_pred             HHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHH-HHHH------H
Q 008021          435 ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVN-LVEF------F  507 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~-l~~l------~  507 (581)
                      .++..++++ +..+|..|++|+|+||+||+++       .+|      .++++|||++.......... -...      .
T Consensus       117 ~I~~QIa~A-L~yLHs~GIIHRDLKPeNILLd-------~dg------~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~  182 (932)
T PRK13184        117 SIFHKICAT-IEYVHSKGVLHRDLKPDNILLG-------LFG------EVVILDWGAAIFKKLEEEDLLDIDVDERNICY  182 (932)
T ss_pred             HHHHHHHHH-HHHHHHCCccccCCchheEEEc-------CCC------CEEEEecCcceecccccccccccccccccccc
Confidence            233333333 7889999999999999999998       667      89999999998762211000 0000      0


Q ss_pred             ------HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          508 ------KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       508 ------~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                            ..++-.-.+.++|.+.. .......|.++|+..+.+++++
T Consensus       183 s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVILyELLTG  227 (932)
T PRK13184        183 SSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVILYQMLTL  227 (932)
T ss_pred             cccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHHHHHHHC
Confidence                  00111223556666543 3344567999999999998876

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.45  E-value=2.3e-13  Score=138.99  Aligned_cols=191  Identities=14%  Similarity=0.079  Sum_probs=115.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|....+       |+.||||..+......-                            .+..    
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~-------~~~v~iK~~~~~~~~~~----------------------------~~~~----   45 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKET-------GRIVAIKKIKLGERKEA----------------------------KDGI----   45 (298)
T ss_pred             eeeeeeccccEEEEEEECCC-------CcEEEEEEEeccccccc----------------------------cchh----
Confidence            35799999999999998764       68999998765421100                            0000    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhh--cchhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~--~~~~~~~~la~~~i~a~  444 (581)
                        +-.+.+|...+.++.     ++++  .+.+.  ......++||||+ +.+|.+++....  ........++..++++ 
T Consensus        46 --~~~~~~e~~~l~~~~-----h~~i--~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~a-  114 (298)
T cd07841          46 --NFTALREIKLLQELK-----HPNI--IGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRG-  114 (298)
T ss_pred             --hHHHHHHHHHHhhcC-----CCCC--hhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHH-
Confidence              011223333333321     1221  11221  1123457999999 889999886532  1112223445455544 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|+||+++       .+|      .++|+|||++..+.......-..     .....+.+.|.+..
T Consensus       115 l~~lH~~~i~H~dl~p~nill~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~-----~~~~~y~aPE~~~~  176 (298)
T cd07841         115 LEYLHSNWILHRDLKPNNLLIA-------SDG------VLKLADFGLARSFGSPNRKMTHQ-----VVTRWYRAPELLFG  176 (298)
T ss_pred             HHHHHhCCeeecCCChhhEEEc-------CCC------CEEEccceeeeeccCCCcccccc-----ccceeeeCHHHHhC
Confidence            7789999999999999999999       667      89999999988765432110000     00112445555533


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ........|.++|+..+.+++.+
T Consensus       177 ~~~~~~~~Dv~slG~il~e~~~g  199 (298)
T cd07841         177 ARHYGVGVDMWSVGCIFAELLLR  199 (298)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHcC
Confidence            33344567888888888888766

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.45  E-value=5.8e-13  Score=134.34  Aligned_cols=190  Identities=13%  Similarity=0.132  Sum_probs=114.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+++..  +  ..+..||+|+.+.+....                                     
T Consensus        10 ~~~ig~G~fg~V~~~~~~~~--~--~~~~~vaik~~~~~~~~~-------------------------------------   48 (266)
T cd05064          10 ERILGTGRFGELCRGCLKLP--S--KRELPVAIHTLRAGCSDK-------------------------------------   48 (266)
T ss_pred             eeeecccCCCeEEEEEEecC--C--CceeeEEEEecCCCCCHH-------------------------------------
Confidence            46899999999999987632  1  125899999876542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                       .+.+|.+|...+.++     ++++  +++.+.  ......++||||++|.+|.+++.....  .......++..++.+ 
T Consensus        49 -~~~~~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~a-  119 (266)
T cd05064          49 -QRRGFLAEALTLGQF-----DHSN--IVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASG-  119 (266)
T ss_pred             -HHHHHHHHHHHHhcC-----CCCC--cCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHH-
Confidence             012234454444332     1222  222221  123456899999999999998864321  111122344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||.||+++       .++      .+++.|||.......+....  . . .......+.++|.+..
T Consensus       120 l~~lH~~~iiH~dikp~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~--~-~-~~~~~~~y~aPE~~~~  182 (266)
T cd05064         120 MKYLSEMGYVHKGLAAHKVLVN-------SDL------VCKISGFRRLQEDKSEAIYT--T-M-SGKSPVLWAAPEAIQY  182 (266)
T ss_pred             HHHHHHCCEeeccccHhhEEEc-------CCC------cEEECCCcccccccccchhc--c-c-CCCCceeecCHHHHhh
Confidence            6789999999999999999998       666      89999999876543221100  0 0 0000112455565533


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       +......|.++|+..+.+++.
T Consensus       183 -~~~~~~~Di~slG~~l~ell~  203 (266)
T cd05064         183 -HHFSSASDVWSFGIVMWEVMS  203 (266)
T ss_pred             -CCccchhHHHHHHHHHHHHhc
Confidence             444556788998888888653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=1.7e-12  Score=129.77  Aligned_cols=118  Identities=19%  Similarity=0.189  Sum_probs=78.2

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ..+++|||++|.+|.+++..... .......++..++.+ +..+|..|++|+|++|.||+++       .++      .+
T Consensus        71 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a-L~~lH~~~i~H~dl~p~nil~~-------~~~------~~  136 (260)
T cd05611          71 YLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLG-VEDLHQRGIIHRDIKPENLLID-------QTG------HL  136 (260)
T ss_pred             eEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHCCeecCCCCHHHeEEC-------CCC------cE
Confidence            45899999999999998865321 112223444444444 6789999999999999999998       666      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++........         ......+.++|.+.. .......|.++|+..+.+++.+
T Consensus       137 ~l~dfg~~~~~~~~~~---------~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g  189 (260)
T cd05611         137 KLTDFGLSRNGLENKK---------FVGTPDYLAPETILG-VGDDKMSDWWSLGCVIFEFLFG  189 (260)
T ss_pred             EEeecccceecccccc---------CCCCcCccChhhhcC-CCCcchhhhHHHHHHHHHHHHC
Confidence            9999998775432110         011122344454433 2234456888888888877765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.45  E-value=4.5e-13  Score=134.65  Aligned_cols=195  Identities=17%  Similarity=0.127  Sum_probs=115.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|+||+|+.+.+       |++||||+..+.....-                                    
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~-------~~~~~ik~~~~~~~~~~------------------------------------   42 (280)
T cd05581           6 GKIIGEGSFSTVVLAKEKET-------NKEYAIKILDKRQLIKE------------------------------------   42 (280)
T ss_pred             eeeecCCCceEEEEEEEcCC-------CCEEEEEEechHhccch------------------------------------
Confidence            57899999999999999764       79999999654210000                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                      ..+-++.+|...+.++.    ++++  +++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        43 ~~~~~~~~e~~~~~~l~----~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~-l  115 (280)
T cd05581          43 KKVKYVKIEKEVLTRLN----GHPG--IIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLA-L  115 (280)
T ss_pred             HHHHHHHHHHHHHHhcc----cCCC--chhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence            00111222333332221    1111  222221  122345799999999999998865321 222223344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHH---------------HHHHHH
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV---------------EFFKAV  510 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~---------------~l~~Al  510 (581)
                      ..||..|++|+|++|.||+++       .+|      .++++|||++..+.......-.               ......
T Consensus       116 ~~Lh~~~~~H~dl~~~ni~i~-------~~~------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (280)
T cd05581         116 EYLHSKGIIHRDLKPENILLD-------KDM------HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASF  182 (280)
T ss_pred             HHHHHCCeeecCCCHHHeEEC-------CCC------CEEecCCccccccCCccccccCCCCCccccccccccccccccc
Confidence            779999999999999999998       677      8999999998876554321000               000000


Q ss_pred             HhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       511 ~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ...-.+.+.|.+.. .......|.+.++..+.+++.+
T Consensus       183 ~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g  218 (280)
T cd05581         183 VGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTG  218 (280)
T ss_pred             cCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhC
Confidence            01112233443322 3334457888888888888776

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.45  E-value=4.7e-14  Score=139.27  Aligned_cols=160  Identities=19%  Similarity=0.281  Sum_probs=108.0

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      .++|| .+|+|.|-||+||.|+.+.+       +-.||+||....       .  |+.                     .
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks-------~~IvalKVlfKs-------q--i~~---------------------~   63 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKS-------LFIVALKVLFKS-------Q--ILK---------------------T   63 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccC-------CcEEEEeeeeHH-------H--HHH---------------------h
Confidence            35677 89999999999999999886       789999996432       0  000                     0


Q ss_pred             HHHHHHHHHHHHHHH--HHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch---hhHHHHH
Q 008021          363 QFAVFMMSQVDLARE--AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE---RLKSALA  437 (581)
Q Consensus       363 ef~~~l~~ElDf~~E--a~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~---~~~~~la  437 (581)
                      +....+.+|+....-  ..|+-|+...|.+...++             |++||..++.+.+.+.+.....   .......
T Consensus        64 ~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy-------------LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi  130 (281)
T KOG0580|consen   64 QVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY-------------LILEYAPRGELYKDLQEGRMKRFDEQRAATYI  130 (281)
T ss_pred             cchhhhhheeEeecccCCccHHhhhhheeccceeE-------------EEEEecCCchHHHHHHhcccccccccchhHHH
Confidence            111122222222111  126666666666655554             9999998888887776422211   1112233


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF  507 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~  507 (581)
                      ...+.+ +..+|..+++|||+||.|+|++       .+|      .+++.|||-+..-+...|..+|.-+
T Consensus       131 ~q~A~A-l~y~h~k~VIhRdiKpenlLlg-------~~~------~lkiAdfGwsV~~p~~kR~tlcgt~  186 (281)
T KOG0580|consen  131 KQLANA-LLYCHLKRVIHRDIKPENLLLG-------SAG------ELKIADFGWSVHAPSNKRKTLCGTL  186 (281)
T ss_pred             HHHHHH-HHHhccCCcccCCCCHHHhccC-------CCC------CeeccCCCceeecCCCCceeeeccc
Confidence            333344 6678899999999999999999       677      8999999998887777788877654

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.45  E-value=1e-12  Score=130.42  Aligned_cols=127  Identities=20%  Similarity=0.215  Sum_probs=79.8

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ..+++|||++|.+|.+++..... .......++..++++ +..+|..|++|+|++|.||+++       .++      .+
T Consensus        67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~-L~~lH~~~i~H~di~~~nil~~-------~~~------~~  132 (265)
T cd05579          67 NLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLA-LEYLHSNGIIHRDLKPDNILID-------SNG------HL  132 (265)
T ss_pred             EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHcCeecCCCCHHHeEEc-------CCC------CE
Confidence            34799999999999998865321 222223445555544 6789999999999999999998       666      89


Q ss_pred             EEEecccccccCHhhHHHH--HHHH-HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNL--VEFF-KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l--~~l~-~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++...........  ...- ........+.+.|.+.. .......|.++|+..+.+++++
T Consensus       133 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g  197 (265)
T cd05579         133 KLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVG  197 (265)
T ss_pred             EEEecccchhcccCcccccccccccccCcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhC
Confidence            9999998765432211000  0000 00011122344444433 2234467888888888888876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.45  E-value=5.5e-13  Score=133.03  Aligned_cols=193  Identities=19%  Similarity=0.121  Sum_probs=120.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||.|++|+||+|....+       ++.|+||+........   +                                 
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~---~---------------------------------   42 (267)
T cd06610           6 IEVIGVGATAVVYAAICLPN-------NEKVAIKRIDLEKCQT---S---------------------------------   42 (267)
T ss_pred             eeeecCCCCeEEEEEEEcCC-------CcEEEEEEeccCCcch---H---------------------------------
Confidence            57899999999999998754       6899999865321100   0                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc----chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG----HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~----~~~~~~~la~~~i~  442 (581)
                        .-++.+|+..+.++.     +++  +++.+.  ......+++|||++|.+|.+++.....    .......+...++.
T Consensus        43 --~~~~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~  113 (267)
T cd06610          43 --VDELRKEVQAMSQCN-----HPN--VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLK  113 (267)
T ss_pred             --HHHHHHHHHHHHhcC-----CCC--EEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence              012233444333221     122  222222  123445799999999999999865322    11112233444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..+|..|++|+|++|.||+++       +++      .++|+|||++..+........ ..-........+.+.|.+
T Consensus       114 a-l~~lh~~~i~h~~l~p~ni~~~-------~~~------~~~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~  178 (267)
T cd06610         114 G-LEYLHSNGQIHRDIKAGNILLG-------EDG------SVKIADFGVSASLADGGDRTR-KVRKTFVGTPCWMAPEVM  178 (267)
T ss_pred             H-HHHHHhCCeecCCCCHHhEEEc-------CCC------CEEEcccchHHHhccCccccc-cccccccCChhhcChHHH
Confidence            4 6788999999999999999998       666      899999999887765432210 000111122344556666


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ..........|.++|+..+.+++++.
T Consensus       179 ~~~~~~~~~~Dv~slG~i~~~l~~g~  204 (267)
T cd06610         179 EQVHGYDFKADIWSFGITAIELATGA  204 (267)
T ss_pred             ccccCcCcccchHhHhHHHHHHHhCC
Confidence            54434455679999999999998873

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.45  E-value=6.7e-13  Score=134.18  Aligned_cols=191  Identities=18%  Similarity=0.139  Sum_probs=116.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||+|+........                   .            .    
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~~-------------------~------------~----   43 (286)
T cd07847           6 LSKIGEGSYGVVFKCRNRET-------GQIVAIKKFVESEDDP-------------------V------------I----   43 (286)
T ss_pred             eeeecccCCeEEEEEEECCC-------CcEEEEEEEeecccCc-------------------c------------c----
Confidence            36799999999999999864       6999999865321000                   0            0    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                        +-.+.+|...+.++.     ++++.-..-+.......++||||++|..+..+...... .......++..++.+ +..
T Consensus        44 --~~~~~~e~~~l~~~~-----h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~-l~~  115 (286)
T cd07847          44 --KKIALREIRMLKQLK-----HPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQA-VNF  115 (286)
T ss_pred             --cHHHHHHHHHHHhCC-----CCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHH-HHH
Confidence              001223333333221     12221111111222345799999999998887643211 112223344444444 778


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      ||..|++|+|++|.||+++       .+|      +++|+|||++..++......-     .......+.+.|.+..-..
T Consensus       116 LH~~~i~H~dl~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~~aPE~~~~~~~  177 (286)
T cd07847         116 CHKHNCIHRDVKPENILIT-------KQG------QIKLCDFGFARILTGPGDDYT-----DYVATRWYRAPELLVGDTQ  177 (286)
T ss_pred             HHHCCceecCCChhhEEEc-------CCC------cEEECccccceecCCCccccc-----CcccccccCCHHHHhCCCC
Confidence            9999999999999999998       667      899999999987765432100     0011223445565433233


Q ss_pred             CCCCCCHHHHHHHHHHhhhH
Q 008021          528 QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....|.++|+..+.+++.+
T Consensus       178 ~~~~~Di~slG~i~~~l~~g  197 (286)
T cd07847         178 YGPPVDVWAIGCVFAELLTG  197 (286)
T ss_pred             cCchhhhHHHHHHHHHHHhC
Confidence            34467999999999998876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.45  E-value=1.1e-12  Score=138.44  Aligned_cols=118  Identities=18%  Similarity=0.114  Sum_probs=81.0

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEE
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIF  486 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvL  486 (581)
                      .++||||++| ++.+.+... -.......++..++.+ +..||..|++|+|+||+||+++       .+|      .++|
T Consensus        96 ~~lv~e~~~~-~l~~~~~~~-l~~~~~~~~~~ql~~a-L~~LH~~gi~H~dlkp~Nil~~-------~~~------~~kL  159 (353)
T cd07850          96 VYLVMELMDA-NLCQVIQMD-LDHERMSYLLYQMLCG-IKHLHSAGIIHRDLKPSNIVVK-------SDC------TLKI  159 (353)
T ss_pred             EEEEEeccCC-CHHHHHhhc-CCHHHHHHHHHHHHHH-HHHHHhCCeeeCCCCHHHEEEC-------CCC------CEEE
Confidence            4799999987 666665432 1111223344444443 7889999999999999999998       667      8999


Q ss_pred             EecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       487 iDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|||++..+.......      .......+.++|.+.. .......|.++|+..+.+++.+
T Consensus       160 ~Dfg~~~~~~~~~~~~------~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g  213 (353)
T cd07850         160 LDFGLARTAGTSFMMT------PYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRG  213 (353)
T ss_pred             ccCccceeCCCCCCCC------CCcccccccCHHHHhC-CCCCCchhhHhHHHHHHHHHHC
Confidence            9999998765432210      0011234566776644 3445678999999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.45  E-value=4.9e-13  Score=147.71  Aligned_cols=189  Identities=13%  Similarity=0.038  Sum_probs=116.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|....+  +    ++.||+|....+...                                      
T Consensus        72 ~~~lg~G~~g~vy~a~~~~~--~----~~~vv~K~~~~~~~~--------------------------------------  107 (478)
T PTZ00267         72 TTLVGRNPTTAAFVATRGSD--P----KEKVVAKFVMLNDER--------------------------------------  107 (478)
T ss_pred             EEEEEeCCCcEEEEEEEcCC--C----CeEEEEEEcccCCHH--------------------------------------
Confidence            57899999999999987652  2    478999964322100                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhh-hc----chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDEL-QG----HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~-~~----~~~~~~~la~~~i  441 (581)
                       ....+++|...+.++     ++++  +++.+..  .....+|||||++|++|.+++... ..    .......++..++
T Consensus       108 -~~~~~~~E~~~l~~l-----~Hpn--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~  179 (478)
T PTZ00267        108 -QAAYARSELHCLAAC-----DHFG--IVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIV  179 (478)
T ss_pred             -HHHHHHHHHHHHHhC-----CCCC--EeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence             001123454444432     1222  3333322  234568999999999999877531 11    1111122333333


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      . .+..+|..|++|+||||.|||++       .+|      .++|+|||++..+.........   ....-.-++.+.|.
T Consensus       180 ~-aL~~lH~~~ivHrDlkp~NIll~-------~~~------~~kL~DFgla~~~~~~~~~~~~---~~~~gt~~y~aPE~  242 (478)
T PTZ00267        180 L-ALDEVHSRKMMHRDLKSANIFLM-------PTG------IIKLGDFGFSKQYSDSVSLDVA---SSFCGTPYYLAPEL  242 (478)
T ss_pred             H-HHHHHHhCCEEECCcCHHhEEEC-------CCC------cEEEEeCcCceecCCccccccc---cccCCCccccCHhH
Confidence            3 37889999999999999999999       667      8999999999877543221110   01111223556665


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. .......|.++|+..+.+++.+
T Consensus       243 ~~~-~~~~~~~Dv~slG~~l~el~tg  267 (478)
T PTZ00267        243 WER-KRYSKKADMWSLGVILYELLTL  267 (478)
T ss_pred             hCC-CCCCcHHhHHHHHHHHHHHHhC
Confidence            533 3344456888888888888776

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.45  E-value=3.7e-13  Score=138.46  Aligned_cols=188  Identities=17%  Similarity=0.099  Sum_probs=116.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       |+.||||.....-...                                     
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~-------~~~vaiK~~~~~~~~~-------------------------------------   59 (297)
T cd06656          24 FEKIGQGASGTVYTAIDIAT-------GQEVAIKQMNLQQQPK-------------------------------------   59 (297)
T ss_pred             eeeeccCCCeEEEEEEECCC-------CCEEEEEEEecCccch-------------------------------------
Confidence            46799999999999998764       6899999864321100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                        .-.+.+|...+..+     +++++.-+..+.......++||||++|.+|.+++............++..++.+ +..|
T Consensus        60 --~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~-L~~L  131 (297)
T cd06656          60 --KELIINEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-LDFL  131 (297)
T ss_pred             --HHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHH-HHHH
Confidence              00122333333221     222322111122223456899999999999998754322222223344444443 7789


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|++|.|||++       .+|      .++++|||++..+++.....     ........+.++|.+.. ...
T Consensus       132 H~~~i~H~dL~p~Nili~-------~~~------~~~l~Dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~-~~~  192 (297)
T cd06656         132 HSNQVIHRDIKSDNILLG-------MDG------SVKLTDFGFCAQITPEQSKR-----STMVGTPYWMAPEVVTR-KAY  192 (297)
T ss_pred             HHCCcccCCCCHHHEEEC-------CCC------CEEECcCccceEccCCccCc-----CcccCCccccCHHHHcC-CCC
Confidence            999999999999999998       666      89999999988765443211     00011223444555433 333


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.++|+..+.+++.+
T Consensus       193 ~~~~Di~slGvil~~l~tg  211 (297)
T cd06656         193 GPKVDIWSLGIMAIEMVEG  211 (297)
T ss_pred             CcHHHHHHHHHHHHHHHhC
Confidence            3456888888888888766

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.44  E-value=6.3e-13  Score=135.04  Aligned_cols=184  Identities=16%  Similarity=0.127  Sum_probs=115.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       ++.||||+...+....                                     
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~-------~~~~aiK~~~~~~~~~-------------------------------------   41 (279)
T cd06619           6 QEILGHGNGGTVYKAYHLLT-------RRILAVKVIPLDITVE-------------------------------------   41 (279)
T ss_pred             eeeeccCCCeEEEEEEEcCC-------CcEEEEEEEecCCChH-------------------------------------
Confidence            46899999999999998764       6899999865431100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                       .+-++.+|.+.+.++.     ++++.-+.-+........+||||++|.++..+..   ........++..++.+ +..+
T Consensus        42 -~~~~~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~qi~~~-l~~l  111 (279)
T cd06619          42 -LQKQIMSELEILYKCD-----SPYIIGFYGAFFVENRISICTEFMDGGSLDVYRK---IPEHVLGRIAVAVVKG-LTYL  111 (279)
T ss_pred             -HHHHHHHHHHHHHhCC-----CCCeeeEEEEEEECCEEEEEEecCCCCChHHhhc---CCHHHHHHHHHHHHHH-HHHH
Confidence             0112334444443331     2222211111122234579999999999976532   1122223455555444 7889


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|+||.||+++       .+|      .++|+|||++..+.......+       .....+.++|.+.. ...
T Consensus       112 H~~~i~H~dlkp~Nill~-------~~~------~~~l~dfg~~~~~~~~~~~~~-------~~~~~y~aPE~~~~-~~~  170 (279)
T cd06619         112 WSLKILHRDVKPSNMLVN-------TRG------QVKLCDFGVSTQLVNSIAKTY-------VGTNAYMAPERISG-EQY  170 (279)
T ss_pred             HHCCEeeCCCCHHHEEEC-------CCC------CEEEeeCCcceecccccccCC-------CCChhhcCceeecC-CCC
Confidence            999999999999999998       667      899999999887654322211       11123344554432 233


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.++|+..+.+++.+
T Consensus       171 ~~~~DvwslG~~l~~l~~g  189 (279)
T cd06619         171 GIHSDVWSLGISFMELALG  189 (279)
T ss_pred             CCcchHHHHHHHHHHHHhC
Confidence            4467899999888888765

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.44  E-value=8e-13  Score=135.04  Aligned_cols=186  Identities=15%  Similarity=0.056  Sum_probs=118.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       ++.||||+.++....    +                                .
T Consensus         6 ~~~ig~g~~~~vy~~~~~~~-------~~~~aiK~~~~~~~~----~--------------------------------~   42 (290)
T cd05580           6 IKTLGTGSFGRVMLVRHKGS-------GKYYALKILSKAKIV----K--------------------------------L   42 (290)
T ss_pred             EEEeecCCCeEEEEEEEcCC-------CCEEEEEEEEHHHhh----h--------------------------------h
Confidence            47899999999999999764       699999987543100    0                                0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                      ...-.+.+|++.+.++.     +++  +++.+..  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        43 ~~~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~-l  114 (290)
T cd05580          43 KQVEHVLNEKRILQSIR-----HPF--LVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLA-L  114 (290)
T ss_pred             hHHHHHHHHHHHHHhCC-----CCC--ccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence            00112344555444432     222  2222222  22345799999999999998754321 111222334444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .+|      .++|+|||++..+.....        .......+.++|.+.. 
T Consensus       115 ~~lH~~~i~H~dl~p~nili~-------~~~------~~kl~dfg~~~~~~~~~~--------~~~~~~~y~aPE~~~~-  172 (290)
T cd05580         115 EYLHSLDIVYRDLKPENLLLD-------SDG------YIKITDFGFAKRVKGRTY--------TLCGTPEYLAPEIILS-  172 (290)
T ss_pred             HHHHHCCEecCCCCHHHEEEC-------CCC------CEEEeeCCCccccCCCCC--------CCCCCccccChhhhcC-
Confidence            789999999999999999998       667      899999999887755411        1112223455665533 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.+.|+..+.+++.+
T Consensus       173 ~~~~~~~Di~slG~il~~l~~g  194 (290)
T cd05580         173 KGYGKAVDWWALGILIYEMLAG  194 (290)
T ss_pred             CCCCccccHHHHHHHHHHHHhC
Confidence            2333457888888888888876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.44  E-value=1.7e-12  Score=134.69  Aligned_cols=205  Identities=22%  Similarity=0.184  Sum_probs=125.7

Q ss_pred             HHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccc
Q 008021          270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI  349 (581)
Q Consensus       270 ~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~  349 (581)
                      .+...-++.++++.|.  +.+.||+|++|+||+|+...+       |+.||||+....-..                   
T Consensus        13 ~~~~~~~~~~~~~~f~--~~~~lg~G~~~~v~~~~~~~~-------~~~valK~~~~~~~~-------------------   64 (317)
T cd06635          13 EIAELFFKEDPEKLFT--DLREIGHGSFGAVYFARDVRT-------NEVVAIKKMSYSGKQ-------------------   64 (317)
T ss_pred             HHHHHhcCCCchhhhh--hhheeccCCCeEEEEEEEcCC-------CcEEEEEEEecCCCC-------------------
Confidence            3555667888888877  356799999999999998764       689999986532110                   


Q ss_pred             ccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc
Q 008021          350 PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH  429 (581)
Q Consensus       350 p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~  429 (581)
                             ..+.          ..++.+|++.+.++.     ++++.-...+.......++||||++| ++.+++......
T Consensus        65 -------~~~~----------~~~~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~  121 (317)
T cd06635          65 -------SNEK----------WQDIIKEVKFLQRIK-----HPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKP  121 (317)
T ss_pred             -------chHH----------HHHHHHHHHHHHhCC-----CCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCC
Confidence                   0000          112344554444332     22221111111123456899999998 566655331111


Q ss_pred             --hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHH
Q 008021          430 --ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF  507 (581)
Q Consensus       430 --~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~  507 (581)
                        ......++..++.+ +..+|..|++|+|++|+||+++       .++      .++|+|||++...+.....      
T Consensus       122 l~~~~~~~i~~~i~~~-l~~lH~~~i~H~dL~p~Nil~~-------~~~------~~kl~dfg~~~~~~~~~~~------  181 (317)
T cd06635         122 LQEVEIAAITHGALQG-LAYLHSHNMIHRDIKAGNILLT-------EPG------QVKLADFGSASIASPANSF------  181 (317)
T ss_pred             CCHHHHHHHHHHHHHH-HHHHHHCCcccCCCCcccEEEC-------CCC------CEEEecCCCccccCCcccc------
Confidence              11112233333333 7788999999999999999998       666      8999999998765543211      


Q ss_pred             HHHHhhcHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          508 KAVARRDGRTAAECTLRL--SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       508 ~Al~~~D~~~~~e~ll~l--~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                         .....+.+.|.+...  +......|.++|+..+.+++.+.
T Consensus       182 ---~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~  221 (317)
T cd06635         182 ---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  221 (317)
T ss_pred             ---cCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCC
Confidence               112234556665432  33445678899988888887663

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.44  E-value=1e-12  Score=135.89  Aligned_cols=185  Identities=14%  Similarity=0.107  Sum_probs=117.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       |+.||+|..+.+....                                ..   
T Consensus         6 ~~~lg~G~~g~v~~~~~~~~-------~~~~a~k~~~~~~~~~--------------------------------~~---   43 (308)
T cd06615           6 LGELGAGNGGVVTKVLHRPS-------GLIMARKLIHLEIKPA--------------------------------IR---   43 (308)
T ss_pred             EeeccCCCCeEEEEEEEcCC-------CeEEEEEEeccccCHH--------------------------------HH---
Confidence            56799999999999998765       6899999866542211                                00   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -++.+|.+.+.++.     ++++  .+.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        44 ---~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~-l  112 (308)
T cd06615          44 ---NQIIRELKVLHECN-----SPYI--VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRG-L  112 (308)
T ss_pred             ---HHHHHHHHHHHhCC-----CCCC--CeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               11233444443321     2222  11111  122345799999999999999864321 112223344444443 6


Q ss_pred             HHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..+|. .|++|+|++|.||+++       .++      .++|+|||++..+.......+       .....+.+.|.+..
T Consensus       113 ~~lH~~~~i~H~dl~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~-------~~~~~~~aPE~~~~  172 (308)
T cd06615         113 TYLREKHKIMHRDVKPSNILVN-------SRG------EIKLCDFGVSGQLIDSMANSF-------VGTRSYMSPERLQG  172 (308)
T ss_pred             HHHHhhCCEEECCCChHHEEEe-------cCC------cEEEccCCCcccccccccccC-------CCCcCccChhHhcC
Confidence            77886 6999999999999998       666      899999999876644322111       12334556666532


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .......|.++|+..+.+++.+
T Consensus       173 -~~~~~~~DiwslG~~l~~l~~g  194 (308)
T cd06615         173 -THYTVQSDIWSLGLSLVEMAIG  194 (308)
T ss_pred             -CCCCccchHHHHHHHHHHHHhC
Confidence             3344567999999999998876

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.44  E-value=7e-14  Score=150.08  Aligned_cols=208  Identities=14%  Similarity=0.132  Sum_probs=141.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.+|.|+||.++..+.+.+       +..+|+|...-.-                          .     -+.-+...
T Consensus         9 ~~~iG~GafG~a~lvrhk~~-------~~~~vlK~I~l~~--------------------------~-----t~~~r~~A   50 (426)
T KOG0589|consen    9 LRQVGRGAFGSALLVRHKSD-------DKLYVLKKINLEK--------------------------L-----TEPERRSA   50 (426)
T ss_pred             hhhcCccccchhhhhhhccC-------CceEEEEEEeccc--------------------------c-----CchhhHHH
Confidence            36799999999999988764       5799999754210                          0     00111123


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCC-cccccccccCCCC-cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH--
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPLVHP-AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL--  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~-V~vP~~~~~l~t~-~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~--  444 (581)
                      .+|+++      +.++.     +|+ |..+.. |...+. -.+||+|++|+++.+.+....+.....+.+....+++.  
T Consensus        51 ~~E~~l------is~~~-----hP~iv~y~ds-~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~a  118 (426)
T KOG0589|consen   51 IQEMDL------LSKLL-----HPNIVEYKDS-FEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLA  118 (426)
T ss_pred             HHHHHH------HHhcc-----CCCeeeeccc-hhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence            333333      32221     222 222222 222333 57999999999999998765544344456666666544  


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||+.+++|||+|+.||+++       .++      .|+|-|||+++.+.++.-.+     .. +-++.+.+...+++
T Consensus       119 v~ylH~~~iLHRDlK~~Niflt-------k~~------~VkLgDfGlaK~l~~~~~~a-----~t-vvGTp~YmcPEil~  179 (426)
T KOG0589|consen  119 VNYLHENRVLHRDLKCANIFLT-------KDK------KVKLGDFGLAKILNPEDSLA-----ST-VVGTPYYMCPEILS  179 (426)
T ss_pred             HHHHHhhhhhcccchhhhhhcc-------ccC------ceeecchhhhhhcCCchhhh-----he-ecCCCcccCHHHhC
Confidence            6779999999999999999999       676      89999999999998876222     22 34554444444555


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh--HhhccccHHHHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS--GVLRRVIWSILLSACSNYL  565 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~--~~~~~~~~~~ll~~~~~~l  565 (581)
                      =-.+....|.|+++|.|.|+..  ..|+..+++.|...+++..
T Consensus       180 d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~  222 (426)
T KOG0589|consen  180 DIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL  222 (426)
T ss_pred             CCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc
Confidence            4556677899999999999864  4688888999888887766

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.44  E-value=1.1e-12  Score=133.08  Aligned_cols=186  Identities=17%  Similarity=0.130  Sum_probs=111.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||.|++|.||+|....+       |+.||+|+.+....+..                            .    ..+
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~-------~~~~a~k~~~~~~~~~~----------------------------~----~~~   46 (286)
T cd06622           6 LDELGKGNYGSVYKVLHRPT-------GVTMAMKEIRLELDESK----------------------------F----NQI   46 (286)
T ss_pred             hhhhcccCCeEEEEEEEcCC-------CcEEEEEEeecccCHHH----------------------------H----HHH
Confidence            46799999999999999764       69999997653321100                            0    011


Q ss_pred             HHHHHHHHHH--HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhh----cchhhHHHHHHHHHH
Q 008021          369 MSQVDLAREA--AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ----GHERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea--~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~----~~~~~~~~la~~~i~  442 (581)
                      .+|++.....  .|+.++...+..             ....++||||++|.+|.+++....    -.......++..++.
T Consensus        47 ~~e~~~l~~~~~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~  113 (286)
T cd06622          47 IMELDILHKAVSPYIVDFYGAFFI-------------EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVK  113 (286)
T ss_pred             HHHHHHHHhcCCCcHHhhhhheec-------------CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHH
Confidence            1222222211  133333322221             123469999999999999876521    111122334444444


Q ss_pred             HHHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          443 ALLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       443 a~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      + +..||. .|++|+|++|.||+++       .++      .++|+|||++..+........       .....+.+.|.
T Consensus       114 ~-l~~LH~~~~i~H~dl~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~-------~~~~~y~aPE~  172 (286)
T cd06622         114 G-LKFLKEEHNIIHRDVKPTNVLVN-------GNG------QVKLCDFGVSGNLVASLAKTN-------IGCQSYMAPER  172 (286)
T ss_pred             H-HHHHHhcCCEeeCCCCHHHEEEC-------CCC------CEEEeecCCcccccCCccccC-------CCccCccCcch
Confidence            4 667885 6999999999999998       566      899999999876643222111       01112344554


Q ss_pred             HHhhcC-----CCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSK-----QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~-----~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.....     .....|.++|+..+.+++.+
T Consensus       173 ~~~~~~~~~~~~~~~~DiwslG~il~~l~~g  203 (286)
T cd06622         173 IKSGGPNQNPTYTVQSDVWSLGLSILEMALG  203 (286)
T ss_pred             hcCCCCCccCCCCcccchHhHHHHHHHHHhC
Confidence            422111     13356889999998888876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.44  E-value=9.8e-13  Score=134.51  Aligned_cols=189  Identities=16%  Similarity=0.122  Sum_probs=116.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|..+.+       ++.||||...+.....-                              +.    
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~-------~~~~avK~~~~~~~~~~------------------------------~~----   43 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRAT-------GKMYACKKLEKKRIKKR------------------------------KG----   43 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCC-------CceEEEEEEehhhccch------------------------------HH----
Confidence            46799999999999999875       79999998655311100                              00    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-cccccccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~  444 (581)
                        +-.+.+|...+.++.     ++.+. +... .......++||||++|.+|.+++......   ......++..++.+ 
T Consensus        44 --~~~~~~E~~il~~l~-----~~~i~~~~~~-~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~-  114 (285)
T cd05630          44 --ESMALNEKQILEKVN-----SRFVVSLAYA-YETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG-  114 (285)
T ss_pred             --HHHHHHHHHHHHhCC-----CCCeeeeeEE-EecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH-
Confidence              001123443333321     11111 1111 11223457999999999999887532211   11112233333333 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       .++      .++|+|||++...+......      .......+.+.|.+..
T Consensus       115 l~~lH~~~iiH~dikp~Nil~~-------~~~------~~~l~Dfg~~~~~~~~~~~~------~~~g~~~y~aPE~~~~  175 (285)
T cd05630         115 LEDLHQERIVYRDLKPENILLD-------DHG------HIRISDLGLAVHVPEGQTIK------GRVGTVGYMAPEVVKN  175 (285)
T ss_pred             HHHHHhCCEEeCCCCHHHEEEC-------CCC------CEEEeeccceeecCCCcccc------CCCCCccccChHHHcC
Confidence            6789999999999999999998       666      89999999987654332110      0011234556666543


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .......|.|.|+..+.+++.+
T Consensus       176 -~~~~~~~DiwslG~~l~~l~~g  197 (285)
T cd05630         176 -ERYTFSPDWWALGCLLYEMIAG  197 (285)
T ss_pred             -CCCCCccccHHHHHHHHHHHhC
Confidence             4445567999999999888876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.44  E-value=6.4e-13  Score=134.52  Aligned_cols=195  Identities=16%  Similarity=0.151  Sum_probs=116.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|.....  +....+..||+|+.+.......                                    
T Consensus        10 ~~~lg~G~~g~Vy~~~~~~~--~~~~~~~~v~~K~~~~~~~~~~------------------------------------   51 (283)
T cd05048          10 LEELGEGAFGKVYKGELTGP--NERLSATSVAIKTLKENAEPKV------------------------------------   51 (283)
T ss_pred             hhcccCccCCcEEEEEEecC--CCCcceeeEEEEecccCCCHHH------------------------------------
Confidence            57899999999999998653  1112247899998664421110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc-----------------hh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-----------------ER  431 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------------~~  431 (581)
                        .-+|.+|...+.++.     ++++.-...+.......+++|||++|.+|.+++......                 ..
T Consensus        52 --~~~~~~ei~~l~~l~-----h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  124 (283)
T cd05048          52 --QQEFRQEAELMSDLQ-----HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCS  124 (283)
T ss_pred             --HHHHHHHHHHHHhcC-----CcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHH
Confidence              012334544444331     222211111112234567999999999999988642110                 01


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ....++..++.+ +..||..|++|+|+||.||+++       .++      .++|+|||++..+..........   ...
T Consensus       125 ~~~~~~~~l~~a-l~~lH~~~i~H~dlkp~Nil~~-------~~~------~~~L~dfg~~~~~~~~~~~~~~~---~~~  187 (283)
T cd05048         125 DFLHIAIQIAAG-MEYLSSHHFVHRDLAARNCLVG-------EGL------TVKISDFGLSRDIYSADYYRVQS---KSL  187 (283)
T ss_pred             HHHHHHHHHHHH-HHHHHhCCeeccccccceEEEc-------CCC------cEEECCCcceeeccccccccccC---CCc
Confidence            112344444444 7889999999999999999998       666      89999999987653322111000   000


Q ss_pred             hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          512 RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..-.+.++|.+.. +......|.++|+..+.++++
T Consensus       188 ~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~  221 (283)
T cd05048         188 LPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFS  221 (283)
T ss_pred             ccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHc
Confidence            0112455665533 344456799999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.44  E-value=1.2e-12  Score=137.63  Aligned_cols=204  Identities=19%  Similarity=0.147  Sum_probs=122.2

Q ss_pred             hCCChhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccc
Q 008021          276 FGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW  354 (581)
Q Consensus       276 lG~~~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~  354 (581)
                      .++...++...++ ..+||+|++|+||+|+...+       ++.||||+........-                      
T Consensus         6 ~~~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~-------~~~~aiK~~~~~~~~~~----------------------   56 (343)
T cd07851           6 LNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKT-------GRKVAIKKLSRPFQSAI----------------------   56 (343)
T ss_pred             hccceecccCceEEEEEeccCCceEEEEEEECCC-------CcEEEEEecccccchhh----------------------
Confidence            3343444444554 68999999999999999764       68999998654311100                      


Q ss_pred             cChhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhh
Q 008021          355 LRLDESVQQFAVFMMSQVDLAREA--AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL  432 (581)
Q Consensus       355 l~l~e~v~ef~~~l~~ElDf~~Ea--~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~  432 (581)
                               ....+..|++.....  .|+..+.+.+....       ........++||||+ |.+|.+++....-....
T Consensus        57 ---------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~  119 (343)
T cd07851          57 ---------HAKRTYRELRLLKHMDHENVIGLLDVFTPAS-------SLEDFQDVYLVTHLM-GADLNNIVKCQKLSDDH  119 (343)
T ss_pred             ---------HHHHHHHHHHHHHhccCCCHHHHHHHhhccc-------cccccccEEEEEecC-CCCHHHHHhcCCCCHHH
Confidence                     000011122211111  12222222211110       001122357999998 56898887542222222


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh
Q 008021          433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR  512 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~  512 (581)
                      ...++..++.+ +..+|..|++|+|++|.||+++       .+|      .++|+|||++..........        ..
T Consensus       120 ~~~~~~ql~~a-L~~LH~~gi~H~dlkp~Nill~-------~~~------~~kL~dfg~~~~~~~~~~~~--------~~  177 (343)
T cd07851         120 IQFLVYQILRG-LKYIHSAGIIHRDLKPSNIAVN-------EDC------ELKILDFGLARHTDDEMTGY--------VA  177 (343)
T ss_pred             HHHHHHHHHHH-HHHHHHCCeecCCCCHHHeEEC-------CCC------CEEEccccccccccccccCC--------cc
Confidence            23344444444 6789999999999999999998       667      89999999998765432111        11


Q ss_pred             hcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          513 RDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       513 ~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ...+.++|.+..........|.++|+..+.+++.+
T Consensus       178 ~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg  212 (343)
T cd07851         178 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG  212 (343)
T ss_pred             cccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhC
Confidence            22355666665433444567999999999998877

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.44  E-value=4e-13  Score=138.50  Aligned_cols=197  Identities=17%  Similarity=0.114  Sum_probs=114.7

Q ss_pred             CCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       287 fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      ++...||.|++|.||+|+.++.     ..+..||||.....-..                                    
T Consensus         4 ~~g~~lG~G~~g~Vy~~~~~~~-----~~~~~~a~k~~~~~~~~------------------------------------   42 (317)
T cd07867           4 YEGCKVGRGTYGHVYKAKRKDG-----KDEKEYALKQIEGTGIS------------------------------------   42 (317)
T ss_pred             eeceEeccCCCeeEEEEEecCC-----CccceEEEEEecCCCCc------------------------------------
Confidence            4567899999999999998642     12589999986543100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCc-cccccccc-CCCCcEEEEeccCCccHHHHHHhhhc----------chhhHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQG----------HERLKS  434 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~----------~~~~~~  434 (581)
                           ..+.+|.+.+.++.     ++++ .+...+.. ....-++||||++| ++.+++.....          ......
T Consensus        43 -----~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~  111 (317)
T cd07867          43 -----MSACREIALLRELK-----HPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVK  111 (317)
T ss_pred             -----HHHHHHHHHHHhCC-----CCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHH
Confidence                 01123433333321     2222 11111111 12234799999987 56555532110          011112


Q ss_pred             HHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          435 ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      .++..++.+ +..||..|++|+|+||.||++....+   .+|      .++|+|||++..+....... .. .......-
T Consensus       112 ~i~~qi~~a-L~~lH~~~ivH~Dlkp~Nil~~~~~~---~~~------~~kl~DfG~a~~~~~~~~~~-~~-~~~~~~t~  179 (317)
T cd07867         112 SLLYQILDG-IHYLHANWVLHRDLKPANILVMGEGP---ERG------RVKIADMGFARLFNSPLKPL-AD-LDPVVVTF  179 (317)
T ss_pred             HHHHHHHHH-HHHHHhCCEEcCCCCHHHEEEccCCC---CCC------cEEEeeccceeccCCCcccc-cc-cCcceecc
Confidence            344444443 78899999999999999999962111   344      89999999998664432110 00 00111122


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.++|.+..........|.|+|+..+.+++++
T Consensus       180 ~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg  212 (317)
T cd07867         180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTS  212 (317)
T ss_pred             cccCcHHhcCCCccCcHHHHHhHHHHHHHHHhC
Confidence            456677765434445567999999999999877

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.44  E-value=4.5e-13  Score=140.82  Aligned_cols=200  Identities=19%  Similarity=0.134  Sum_probs=118.2

Q ss_pred             HhCCChhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccccc
Q 008021          275 AFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVK  353 (581)
Q Consensus       275 elG~~~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~  353 (581)
                      +.++.+.++...|. .++||+|++|.||+|+...+       |+.||||+.+......                      
T Consensus         5 ~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~-------~~~vaiK~~~~~~~~~----------------------   55 (342)
T cd07879           5 EVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRT-------GEKVAIKKLSRPFQSE----------------------   55 (342)
T ss_pred             hhhhhhhccccceEEEEEeeecCCeEEEEEEeCCC-------CcEEEEEEecCccccc----------------------
Confidence            44555555555665 68999999999999998764       6999999865431100                      


Q ss_pred             ccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCc-cccccc-----ccCCCCcEEEEeccCCccHHHHHHhhh
Q 008021          354 WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPV-----YPLVHPAVLVETYEQGECVSRYVDELQ  427 (581)
Q Consensus       354 ~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~-----~~l~t~~VLVmEyi~G~~L~~~l~~~~  427 (581)
                               .+...      +.+|.+.+.++.     ++++ .+...+     .......++||||+++ .+.++... .
T Consensus        56 ---------~~~~~------~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~  113 (342)
T cd07879          56 ---------IFAKR------AYRELTLLKHMQ-----HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMGH-P  113 (342)
T ss_pred             ---------cchhH------HHHHHHHHHhcC-----CCCccchhheecccccCCCCceEEEEeccccc-CHHHHHcC-C
Confidence                     00001      112222222211     1111 111111     0111234799999975 56655421 1


Q ss_pred             cchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHH
Q 008021          428 GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF  507 (581)
Q Consensus       428 ~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~  507 (581)
                      ........++..++.+ +..+|..|++|+|++|+||+++       .+|      .++|+|||++...+......     
T Consensus       114 ~~~~~~~~~~~qi~~a-L~~LH~~~i~H~dlkp~NIll~-------~~~------~~kL~dfg~~~~~~~~~~~~-----  174 (342)
T cd07879         114 LSEDKVQYLVYQMLCG-LKYIHSAGIIHRDLKPGNLAVN-------EDC------ELKILDFGLARHADAEMTGY-----  174 (342)
T ss_pred             CCHHHHHHHHHHHHHH-HHHHHHCCcccCCCCHHHEEEC-------CCC------CEEEeeCCCCcCCCCCCCCc-----
Confidence            1111222334444443 7789999999999999999998       667      89999999987654322110     


Q ss_pred             HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       508 ~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                         .....+.+.|.+..........|.++|+..+.+++.+
T Consensus       175 ---~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g  211 (342)
T cd07879         175 ---VVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTG  211 (342)
T ss_pred             ---eeeecccChhhhcCccccCchHHHHHHHHHHHHHHhC
Confidence               0112345566654433344567999999999999876

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.44  E-value=5e-13  Score=143.66  Aligned_cols=194  Identities=18%  Similarity=0.158  Sum_probs=128.1

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||.|.||+||+++.+.+       |+.+|+|+........                          ..          
T Consensus        41 ~~lG~G~Fg~v~~~~~~~t-------g~~~A~K~i~k~~~~~--------------------------~~----------   77 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKST-------GKEVACKVIPKRKLRG--------------------------KE----------   77 (382)
T ss_pred             hhhCCCCceEEEEEEecCC-------CceeEEEEeehhhccc--------------------------cc----------
Confidence            7899999999999999986       7999999875431100                          00          


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCC-cccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~-V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                      ..-+..+|.+.++++..    +++ |.++..+ +....-+||||+++|+.|-+.+....-.......+....+++ ++++
T Consensus        78 ~~~~v~~Ev~il~~l~~----hpniv~l~~~~-e~~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~a-v~~l  151 (382)
T KOG0032|consen   78 DREDVRREVAILQQLSG----HPNIVQLKDAF-EDPDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEA-VKYL  151 (382)
T ss_pred             cHHHHHHHHHHHHhccC----CCCEEEEEEEE-EcCCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHH-HHHH
Confidence            11234556655554432    232 3333333 233455799999999999988755311122223344444444 8889


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|+||+|+|+...+.   .++      .++++|||++....+..+..      .++-..++-++|.+.. ..+
T Consensus       152 H~~gvvHrDlKpEN~L~~~~~~---~~~------~ik~~DFGla~~~~~~~~~~------~~~Gtp~y~APEvl~~-~~y  215 (382)
T KOG0032|consen  152 HSLGVVHRDLKPENLLLASKDE---GSG------RIKLIDFGLAKFIKPGERLH------TIVGTPEYVAPEVLGG-RPY  215 (382)
T ss_pred             HhCCceeccCCHHHeeeccccC---CCC------cEEEeeCCCceEccCCceEe------eecCCccccCchhhcC-CCC
Confidence            9999999999999999983221   123      89999999999887733222      2344555666666543 455


Q ss_pred             CCCCCHHHHHHHHHHhhhHh
Q 008021          529 QNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ....|.|+.+..+.-|+.++
T Consensus       216 ~~~~DiWS~Gvi~yiLL~G~  235 (382)
T KOG0032|consen  216 GDEVDVWSIGVILYILLSGV  235 (382)
T ss_pred             CcccchhHHHHHHHHHhhCC
Confidence            56789999999999988774

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.44  E-value=8.5e-13  Score=130.64  Aligned_cols=192  Identities=18%  Similarity=0.156  Sum_probs=117.4

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||.|++|+||+|......    ..+..|+||+.++.....                                      
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~----~~~~~~~ik~~~~~~~~~--------------------------------------   38 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKD----GKTTEVAVKTLKEDASEE--------------------------------------   38 (262)
T ss_pred             CccccCCceEEEEEEEecCC----CCCceEEeEeeccccchh--------------------------------------
Confidence            46899999999999997410    125899999977653211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhh--------c--chhhHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ--------G--HERLKSALAHI  439 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~--------~--~~~~~~~la~~  439 (581)
                      ..-++.+|.+.+.++.     ++++.-..-+........++|||++|.+|.+++....        .  .......++..
T Consensus        39 ~~~~~~~e~~~l~~~~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (262)
T cd00192          39 ERKDFLKEARVMKKLG-----HPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQ  113 (262)
T ss_pred             HHHHHHHHHHHHhhcC-----CCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHH
Confidence            0112334444444332     2222111111112345589999999999999986531        1  11222334444


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      ++.+ +..||..|++|+|++|.||+++       .++      .++|+|||.+..+........   .........+.++
T Consensus       114 l~~a-l~~lH~~~i~H~di~p~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~---~~~~~~~~~y~aP  176 (262)
T cd00192         114 IAKG-MEYLASKKFVHRDLAARNCLVG-------EDL------VVKISDFGLSRDVYDDDYYRK---KTGGKLPIRWMAP  176 (262)
T ss_pred             HHHH-HHHHHcCCcccCccCcceEEEC-------CCC------cEEEccccccccccccccccc---ccCCCcCccccCH
Confidence            4444 7889999999999999999999       566      899999999987765431000   0000011124455


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      |.+.. .......|.++++..+.+++.
T Consensus       177 E~~~~-~~~~~~~Di~slG~il~~l~~  202 (262)
T cd00192         177 ESLKD-GIFTSKSDVWSFGVLLWEIFT  202 (262)
T ss_pred             HHhcc-CCcchhhccHHHHHHHHHHHh
Confidence            54433 234456788888888888876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.44  E-value=7.4e-13  Score=136.35  Aligned_cols=124  Identities=19%  Similarity=0.165  Sum_probs=84.1

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ...+++|||++|.+|.+++............++..++.+ +..+|..|++|+|++|+||+++       .++      .+
T Consensus        91 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~-L~~LH~~~ivH~dl~p~Nill~-------~~~------~~  156 (297)
T cd06659          91 EELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQA-LCYLHSQGVIHRDIKSDSILLT-------LDG------RV  156 (297)
T ss_pred             CeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHeEEc-------cCC------cE
Confidence            345799999999999987754222222223344444544 7789999999999999999998       667      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +|+|||++..+..+....     ........+.+.|.+.. .......|.++|+..+.+++.+.
T Consensus       157 kL~dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~  214 (297)
T cd06659         157 KLSDFGFCAQISKDVPKR-----KSLVGTPYWMAPEVISR-TPYGTEVDIWSLGIMVIEMVDGE  214 (297)
T ss_pred             EEeechhHhhcccccccc-----cceecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCC
Confidence            999999987665432211     00112234455665533 33445679999999999988763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.43  E-value=1e-12  Score=132.22  Aligned_cols=189  Identities=17%  Similarity=0.074  Sum_probs=110.3

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      .||.|++|+||+|+....     .....||||.........                                      .
T Consensus         2 ~lg~G~fg~v~~~~~~~~-----~~~~~~~~k~~~~~~~~~--------------------------------------~   38 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRG-----MSKARVVVKELRASATPD--------------------------------------E   38 (269)
T ss_pred             cCCccCCceEEEEEEecC-----CCCeEEEEeecCccCChH--------------------------------------H
Confidence            489999999999986542     124689999754331110                                      0


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc------hhhHHHHHHHHHH
Q 008021          371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH------ERLKSALAHIGTH  442 (581)
Q Consensus       371 ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~------~~~~~~la~~~i~  442 (581)
                      +.++.+|...+..+     +++++  .+.+.  ......++||||++|++|.+++......      ......++..++.
T Consensus        39 ~~~~~~e~~~~~~l-----~h~ni--i~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~  111 (269)
T cd05042          39 QLLFLQEVQPYREL-----NHPNV--LQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVAS  111 (269)
T ss_pred             HHHHHHHHHHHHhC-----CCCCc--ceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHH
Confidence            12234444433322     12222  12221  1234568999999999999998653221      1111234444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..+|..|++|+|+||.||+++       .++      +++++|||++.....+......   ......-.+.++|.+
T Consensus       112 ~-l~~lH~~~ivH~dlkp~Nill~-------~~~------~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~  174 (269)
T cd05042         112 G-LLWLHQADFIHSDLALRNCQLT-------ADL------SVKIGDYGLALEQYPEDYYITK---DCHAVPLRWLAPELV  174 (269)
T ss_pred             H-HHHHHhcCEecccccHhheEec-------CCC------cEEEeccccccccccchheecc---CCCCCcccccCHHHH
Confidence            4 7789999999999999999998       666      8999999998654332110000   000000113445554


Q ss_pred             Hhh------cCCCCCCCHHHHHHHHHHhhh
Q 008021          523 LRL------SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       523 l~l------~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ...      .......|.|+|+..+.+++.
T Consensus       175 ~~~~~~~~~~~~~~~~DiwslG~~l~el~~  204 (269)
T cd05042         175 EIRGQDLLPKDQTKKSNIWSLGVTMWELFT  204 (269)
T ss_pred             hhccccccccccchhhHHHHHHHHHHHHHh
Confidence            321      122345688888888888876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.43  E-value=2.7e-13  Score=144.39  Aligned_cols=206  Identities=19%  Similarity=0.138  Sum_probs=120.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHh-cccccccccChhHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKIS-SVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~-~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      .+-||+|++|.|-+|+...+       |+.|||||.+..-            +..... ..-|.++...++.        
T Consensus       102 ~~eiG~G~yGkVkLar~~~~-------~~l~AiKil~K~~------------~~~~~~~~~~~a~~~~~~ek--------  154 (576)
T KOG0585|consen  102 IKEIGSGQYGKVKLARDEVD-------GKLYAIKILPKKE------------LRRQYGFPRQPAMKLMPIEK--------  154 (576)
T ss_pred             hhhhcCCccceEEEEeecCC-------CcEEEEEeechhh------------hhhhcccccccccccCcHHH--------
Confidence            46799999999999999764       7999999976431            000000 0112222122221        


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHH---HHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI---GTHA  443 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~---~i~a  443 (581)
                            .++|...+.++.+    ..-|..-+++.+ .++.-+||.|||.++.+...-....   .....-|+.   .+-.
T Consensus       155 ------v~~EIailKkl~H----~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~---els~~~Ar~ylrDvv~  221 (576)
T KOG0585|consen  155 ------VRREIAILKKLHH----PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP---ELSEQQARKYLRDVVL  221 (576)
T ss_pred             ------HHHHHHHHHhcCC----cCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcc---cccHHHHHHHHHHHHH
Confidence                  2345445554431    112233333433 3456689999999988875321111   011122222   2223


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                      -|+.||.+|++||||||.|+|++       .+|      +++|.|||.+-..+...-++.-+.+...+-.-..-|.|+..
T Consensus       222 GLEYLH~QgiiHRDIKPsNLLl~-------~~g------~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~  288 (576)
T KOG0585|consen  222 GLEYLHYQGIIHRDIKPSNLLLS-------SDG------TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCS  288 (576)
T ss_pred             HHHHHHhcCeeccccchhheEEc-------CCC------cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhc
Confidence            48899999999999999999999       778      99999999887663322222222222222222334555554


Q ss_pred             h---hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 R---LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~---l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .   ........|.|+++-.|.=++.+
T Consensus       289 ~~~~~~~~g~a~DiWalGVTLYCllfG  315 (576)
T KOG0585|consen  289 GGNSFSYSGFALDIWALGVTLYCLLFG  315 (576)
T ss_pred             CCCCccccchhhhhhhhhhhHHHhhhc
Confidence            4   23344578999988888776655

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.43  E-value=1.5e-12  Score=147.01  Aligned_cols=128  Identities=16%  Similarity=0.071  Sum_probs=78.0

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcch------------------hh---HHHHHHHHHHHHHHHhhhCCeEecCCCCCCE
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGHE------------------RL---KSALAHIGTHALLKMLLVDNFIHADMHPGNI  463 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~~------------------~~---~~~la~~~i~a~l~~L~~~G~~H~DlHPGNI  463 (581)
                      ...+|||||++|.+|.+++.......                  ..   -..++..++.+ +..+|..|++|||+||.||
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~a-L~yLH~~gIiHRDLKP~NI  286 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFA-LDGLHSTGIVHRDVKPQNI  286 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHH-HHHHHHCCEEeCcCCHHHE
Confidence            34579999999999999875421100                  00   01233333333 7889999999999999999


Q ss_pred             EEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC---------------
Q 008021          464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ---------------  528 (581)
Q Consensus       464 LV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~---------------  528 (581)
                      |++.      .++      .++|+|||+++.+.......-    ........+.++|.+......               
T Consensus       287 Ll~~------~~~------~~KL~DFGlA~~l~~~~~~~~----~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~  350 (566)
T PLN03225        287 IFSE------GSG------SFKIIDLGAAADLRVGINYIP----KEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPV  350 (566)
T ss_pred             EEeC------CCC------cEEEEeCCCccccccccccCC----cccccCCCccChHHhhccCCCCCCccccccccccch
Confidence            9981      235      899999999976532211000    000111234555544322211               


Q ss_pred             ------CCCCCHHHHHHHHHHhhhHhh
Q 008021          529 ------QNCPNPKAFIEWMRLLPSGVL  549 (581)
Q Consensus       529 ------~~~~D~~~f~~~l~~l~~~~~  549 (581)
                            +...|.|+|...+.+++.+.+
T Consensus       351 l~~~~~~~k~DVwSlGviL~el~~~~~  377 (566)
T PLN03225        351 LWQLNLPDRFDIYSAGLIFLQMAFPNL  377 (566)
T ss_pred             hccccCCCCcccHHHHHHHHHHHhCcC
Confidence                  122399999999999886543

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.43  E-value=9.7e-13  Score=132.59  Aligned_cols=189  Identities=18%  Similarity=0.098  Sum_probs=112.8

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      .||+|++|.||+|+....     ..+..||+|..+.....                                      ..
T Consensus         2 ~lg~G~~g~Vy~~~~~~~-----~~~~~~~~k~~~~~~~~--------------------------------------~~   38 (269)
T cd05087           2 EIGNGWFGKVILGEVNSG-----YTPAQVVVKELRVSASV--------------------------------------QE   38 (269)
T ss_pred             cccccCCceEEEEEEcCC-----CCceEEEEEecCCCCCh--------------------------------------HH
Confidence            589999999999987532     12478999975543110                                      11


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc------hhhHHHHHHHHHH
Q 008021          371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH------ERLKSALAHIGTH  442 (581)
Q Consensus       371 ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~------~~~~~~la~~~i~  442 (581)
                      +.++.+|...+.++.     ++++  ++.+.  ......++||||++|.+|.+++......      ......++..++.
T Consensus        39 ~~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~  111 (269)
T cd05087          39 QMKFLEEAQPYRSLQ-----HSNL--LQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIAL  111 (269)
T ss_pred             HHHHHHHHHHHHhCC-----CCCE--eeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHH
Confidence            234555665554442     2222  22222  2234568999999999999988542211      0111233444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..+|..|++|+|+||.||+++       .++      .++|+|||++.....+......   ......-.+.++|.+
T Consensus       112 a-l~~lH~~~i~H~dlkp~nil~~-------~~~------~~kL~dfg~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~  174 (269)
T cd05087         112 G-LLHLHKNNFIHSDLALRNCLLT-------ADL------TVKIGDYGLSHNKYKEDYYVTP---DQLWVPLRWIAPELV  174 (269)
T ss_pred             H-HHHHHHCCEeccccCcceEEEc-------CCC------cEEECCccccccccCcceeecC---CCcCCcccccCHhHh
Confidence            4 6788999999999999999998       566      8999999988654322110000   000001123455554


Q ss_pred             Hhh------cCCCCCCCHHHHHHHHHHhhh
Q 008021          523 LRL------SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       523 l~l------~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ...      .......|.++|+..+.+++.
T Consensus       175 ~~~~~~~~~~~~~~~~DiwslG~~l~el~~  204 (269)
T cd05087         175 DEVHGNLLVVDQTKESNVWSLGVTIWELFE  204 (269)
T ss_pred             ccccccccccCCCccchhHHHHHHHHHHHh
Confidence            321      122446788888888888774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.43  E-value=1.1e-12  Score=134.77  Aligned_cols=123  Identities=18%  Similarity=0.157  Sum_probs=80.6

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ...++||||++|.+|.+++............++..++.+ +..+|..|++|+|++|.||+++       .++      .+
T Consensus        92 ~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~-l~~LH~~~ivH~dlkp~Nill~-------~~~------~~  157 (292)
T cd06658          92 DELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRA-LSYLHNQGVIHRDIKSDSILLT-------SDG------RI  157 (292)
T ss_pred             CeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHHCCEeecCCCHHHEEEc-------CCC------CE
Confidence            345799999999999998754221222223344444444 7889999999999999999998       666      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++..+.......     ........+.+.|.+.. .......|.++|+..+.+++.+
T Consensus       158 kL~dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g  214 (292)
T cd06658         158 KLSDFGFCAQVSKEVPKR-----KSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDG  214 (292)
T ss_pred             EEccCcchhhcccccccC-----ceeecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhC
Confidence            999999887654332111     00011223445555432 2333457888888888888776

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.43  E-value=4.9e-12  Score=141.82  Aligned_cols=143  Identities=17%  Similarity=0.177  Sum_probs=98.1

Q ss_pred             CceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       288 d~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      ..+.||+|++|.||+|...         ++.+++|+..+.....                          .+.-+.    
T Consensus       337 ~~~~iG~G~~g~Vy~~~~~---------~~~~v~k~~~~~~~~~--------------------------~~~~~~----  377 (535)
T PRK09605        337 PDHLIGKGAEADIKKGEYL---------GRDAVIKERVPKGYRH--------------------------PELDER----  377 (535)
T ss_pred             ccceeccCCcEEEEEEeec---------CccceeEEEecccccc--------------------------hhHHHH----
Confidence            4678999999999999875         3567777654431110                          000000    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKM  447 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~  447 (581)
                       ...-.+.+|++.+.++.     .+++..|..+.......+|||||++|.+|.+++..       ...++..+.+. +..
T Consensus       378 -~~~~~~~~E~~~l~~l~-----~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~~-------~~~~~~~i~~~-L~~  443 (535)
T PRK09605        378 -LRTERTRAEARLLSEAR-----RAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLEG-------NPELVRKVGEI-VAK  443 (535)
T ss_pred             -HHHHHHHHHHHHHHhhc-----ccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHHH-------HHHHHHHHHHH-HHH
Confidence             11123566777777664     24556666665555678999999999999998742       23344444443 788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      +|..|++|+|+||+|||+.       . +      +++|+|||+++..++
T Consensus       444 lH~~giiHrDlkp~NILl~-------~-~------~~~liDFGla~~~~~  479 (535)
T PRK09605        444 LHKAGIVHGDLTTSNFIVR-------D-D------RLYLIDFGLGKYSDL  479 (535)
T ss_pred             HHhCCCccCCCChHHEEEE-------C-C------cEEEEeCcccccCCc
Confidence            9999999999999999996       2 3      799999999987654

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.43  E-value=1.2e-12  Score=130.21  Aligned_cols=127  Identities=17%  Similarity=0.167  Sum_probs=82.1

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP  482 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~  482 (581)
                      ...++||||++|.+|.+++......  ......++..++.+ +..||..|++|+|+||+||+++....+   +   ...+
T Consensus        73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~-l~~LH~~~i~H~dlkp~Nill~~~~~~---~---~~~~  145 (259)
T cd05037          73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASA-LHYLEDKKLVHGNVCGKNILVARYGLN---E---GYVP  145 (259)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHH-HHHHhhCCeecccCccceEEEecCccc---c---CCce
Confidence            4568999999999999988653211  11122334444443 788999999999999999999832110   0   1123


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++|+|||++..+......         .....+.+.|.+... .......|.++|+..+.+++.+
T Consensus       146 ~~kl~Dfg~a~~~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~  202 (259)
T cd05037         146 FIKLSDPGIPITVLSREER---------VERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN  202 (259)
T ss_pred             eEEeCCCCccccccccccc---------ccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC
Confidence            7999999998876441110         112234566665443 2344457899999888888763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.43  E-value=1.4e-12  Score=130.91  Aligned_cols=86  Identities=22%  Similarity=0.263  Sum_probs=75.2

Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ++.||..||.|||+||||+||+       .+.      -++++|||+++.-+.+++.++..-    +-..|+++.|++..
T Consensus       169 LKYLHsA~ILHRDIKPGNLLVN-------SNC------vLKICDFGLARvee~d~~~hMTqE----VVTQYYRAPEiLMG  231 (449)
T KOG0664|consen  169 LKYLHTANILHRDIKPGNLLVN-------SNC------ILKICDFGLARTWDQRDRLNMTHE----VVTQYYRAPELLMG  231 (449)
T ss_pred             hHHHhhcchhhccCCCccEEec-------cCc------eEEecccccccccchhhhhhhHHH----HHHHHhccHHHhhc
Confidence            7889999999999999999998       554      899999999999888888776532    34578999999988


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .-.+.+.+|.|...+...||+.+
T Consensus       232 aRhYs~AvDiWSVGCIFaELLgR  254 (449)
T KOG0664|consen  232 ARRYTGAVDIWSVGCIFAELLQR  254 (449)
T ss_pred             chhhcCccceehhhHHHHHHHhh
Confidence            88888999999999999999877

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.43  E-value=8.6e-13  Score=132.25  Aligned_cols=200  Identities=18%  Similarity=0.114  Sum_probs=116.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ...||.|++|+||+|....+       ++.||||+....-...-                        ......++.   
T Consensus         5 ~~~ig~g~~~~v~~a~~~~~-------~~~~~~k~~~~~~~~~~------------------------~~~~~~~~~---   50 (267)
T cd06628           5 GALIGSGSFGSVYLGMNASS-------GELMAVKQVELPSVSAS------------------------SKDRKRSML---   50 (267)
T ss_pred             cceeecCCCeEEEEEEecCC-------CcEEEEEEecCCCcccc------------------------hhHHHHHHH---
Confidence            46899999999999998754       68999998654311100                        000001111   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -++.+|...+.++.     +++  +++.+.  ......+++|||++|.+|.+++..... .......++..++.+ +
T Consensus        51 ---~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~-l  119 (267)
T cd06628          51 ---DALAREIALLKELQ-----HEN--IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKG-L  119 (267)
T ss_pred             ---HHHHHHHHHHHhcC-----CCC--eeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHH-H
Confidence               12334444444332     222  222221  223456799999999999999865321 111222344444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHH-HHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRV-NLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~-~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..+|..|++|+|++|.||+++       +++      .++|+|||++..+...... .....-......-.+.+.|.+..
T Consensus       120 ~~lH~~~ivH~di~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~  186 (267)
T cd06628         120 NYLHNRGIIHRDIKGANILVD-------NKG------GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ  186 (267)
T ss_pred             HHHHhcCcccccCCHHHEEEc-------CCC------CEEecccCCCcccccccccCCccccccccCCCcCccChhHhcc
Confidence            789999999999999999998       666      8999999998877532110 00000000001112344554432


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       +......|.+.++..+.+++.+
T Consensus       187 -~~~~~~~Dv~slG~il~~l~~g  208 (267)
T cd06628         187 -TSYTRKADIWSLGCLVVEMLTG  208 (267)
T ss_pred             -CCCCchhhhHHHHHHHHHHhhC
Confidence             2333456888888888888765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.43  E-value=5.8e-13  Score=134.82  Aligned_cols=188  Identities=15%  Similarity=0.106  Sum_probs=113.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......                           .    ..   
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~---------------------------~----~~---   43 (285)
T cd07861           5 IEKIGEGTYGVVYKGRNKKT-------GQIVAMKKIRLESEEE---------------------------G----VP---   43 (285)
T ss_pred             eeEecccCceEEEEEEECCC-------CcEEEEEEeccccccC---------------------------C----ch---
Confidence            46899999999999998764       6999999865431100                           0    00   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc----chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG----HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~----~~~~~~~la~~~i~  442 (581)
                         -.+.+|...+.++.     +++  +++.+..  .....++||||++| ++.+++.....    .......++..++.
T Consensus        44 ---~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~  112 (285)
T cd07861          44 ---STAIREISLLKELQ-----HPN--IVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQ  112 (285)
T ss_pred             ---HHHHHHHHHHHhcC-----CCC--EeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence               01123333333331     222  2222211  12345799999986 67777653221    11111234444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..+|..|++|+|++|.||+++       .+|      .++|+|||++..+....+..-..     .....+.+.|.+
T Consensus       113 ~-L~~lH~~~i~H~dl~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~-----~~~~~y~aPE~~  173 (285)
T cd07861         113 G-ILFCHSRRVLHRDLKPQNLLID-------NKG------VIKLADFGLARAFGIPVRVYTHE-----VVTLWYRAPEVL  173 (285)
T ss_pred             H-HHHHHhCCeeecCCCHHHEEEc-------CCC------cEEECcccceeecCCCcccccCC-----cccccccChHHh
Confidence            4 7889999999999999999998       677      89999999987654322110000     011234556655


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..........|.++|+..+.+++++
T Consensus       174 ~~~~~~~~~~Dv~slG~il~~l~tg  198 (285)
T cd07861         174 LGSPRYSTPVDIWSIGTIFAEMATK  198 (285)
T ss_pred             cCCCCcCcHHHHHHHHHHHHHHHHC
Confidence            4433334457899999999988876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.42  E-value=9.6e-13  Score=131.95  Aligned_cols=197  Identities=12%  Similarity=0.079  Sum_probs=116.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|....        |+.||||..........                          ...++     
T Consensus         5 ~~~ig~g~~~~v~~~~~~~--------~~~~avk~~~~~~~~~~--------------------------~~~~~-----   45 (265)
T cd06631           5 GEVLGKGAYGTVYCGLTNQ--------GQLIAVKQVELDTSNVL--------------------------AAEKE-----   45 (265)
T ss_pred             cceEeccCCeEEEEEEEcC--------CCeEEEEEeecCccchh--------------------------hHHHH-----
Confidence            4679999999999998743        68999998664321100                          00000     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|+..+.++.     ++++  ++.+.  ......+++|||++|.+|.+++..... .......++..++.+ +
T Consensus        46 --~~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~-l  115 (265)
T cd06631          46 --YEKLQEEVDLLKSLK-----HVNI--VQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDG-V  115 (265)
T ss_pred             --HHHHHHHHHHHHhcC-----CCCE--eeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence              012344544444332     1222  22221  122445899999999999999865221 111122333344433 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhH-HHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR-VNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r-~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..+|..|++|+|++|.||+++       .++      .++|+|||++..+..... ...............+.+.|.+..
T Consensus       116 ~~lH~~~i~H~dl~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  182 (265)
T cd06631         116 AYLHNNCVVHRDIKGNNVMLM-------PNG------IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE  182 (265)
T ss_pred             HHHHhCCcccCCcCHHhEEEC-------CCC------eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcC
Confidence            789999999999999999998       666      899999998876532110 001111111122334455555433


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                       .......|.+.|+..+.+++.+.
T Consensus       183 -~~~~~~~Dv~slG~~~~~l~~g~  205 (265)
T cd06631         183 -SGYGRKSDIWSIGCTVFEMATGK  205 (265)
T ss_pred             -CCCcchhhHHHHHHHHHHHHhCC
Confidence             22334578899988888888763

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.42  E-value=2.1e-12  Score=127.92  Aligned_cols=190  Identities=19%  Similarity=0.201  Sum_probs=116.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+...+ .  ...++.||+|+.+++....                                     
T Consensus         4 ~~~lg~g~~g~v~~~~~~~~-~--~~~~~~vaiK~~~~~~~~~-------------------------------------   43 (258)
T smart00219        4 GKKLGEGAFGEVYKGTLKGL-S--GEKEVEVAVKTLKEDADEQ-------------------------------------   43 (258)
T ss_pred             cceeccCCCcceEEEEecCC-C--CCCCceEEEEEccCCCChH-------------------------------------
Confidence            36799999999999999763 1  0124899999987652210                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                       ..-++..|...+.++     +++++  ++.+.  ......+++|||++|.+|.+++.....   .......++..++.+
T Consensus        44 -~~~~~~~e~~~l~~l-----~~~~i--~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~  115 (258)
T smart00219       44 -QIEEFLREARIMRKL-----DHPNI--VKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARG  115 (258)
T ss_pred             -HHHHHHHHHHHHHhc-----CCCch--heEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHH
Confidence             011223343333332     12222  22221  122456899999999999998864322   112223344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh-cHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR-DGRTAAECT  522 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~-D~~~~~e~l  522 (581)
                       +..+|..|++|+|++|+||+++       .++      .++|+|||++..........  .   ..... -.+.+.|.+
T Consensus       116 -l~~lh~~~~~h~dl~~~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~--~---~~~~~~~~y~~Pe~~  176 (258)
T smart00219      116 -MEYLESKNFIHRDLAARNCLVG-------ENL------VVKISDFGLSRDLYDDDYYK--K---KGGKLPIRWMAPESL  176 (258)
T ss_pred             -HHHHhcCCeeecccccceEEEc-------cCC------eEEEcccCCceecccccccc--c---ccCCCcccccChHHh
Confidence             7789999999999999999998       666      89999999988765441100  0   00000 122344444


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       .........|.+.++..+.+++.
T Consensus       177 -~~~~~~~~~Di~slG~i~~~l~~  199 (258)
T smart00219      177 -KDGKFTSKSDVWSFGVLLWEIFT  199 (258)
T ss_pred             -ccCCCCcchhHHHHHHHHHHHHh
Confidence             33444456788888888888775

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.42  E-value=1.3e-12  Score=139.62  Aligned_cols=85  Identities=15%  Similarity=0.129  Sum_probs=59.4

Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||.|||++       .++      .++|+|||++..+............   ...-.+.+.|.+..
T Consensus       225 L~yLH~~giiHrDLkp~Nil~~-------~~~------~~kL~DfGla~~~~~~~~~~~~~~~---~~~~~y~aPE~~~~  288 (374)
T cd05106         225 MDFLASKNCIHRDVAARNVLLT-------DGR------VAKICDFGLARDIMNDSNYVVKGNA---RLPVKWMAPESIFD  288 (374)
T ss_pred             HHHHHHCCEEeccCchheEEEe-------CCC------eEEEeeceeeeeccCCcceeeccCC---CCccceeCHHHhcC
Confidence            7889999999999999999998       666      8999999998876443211110000   00012556666533


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       +......|.++|+..+.+++.
T Consensus       289 -~~~~~~~DvwSlGvil~ellt  309 (374)
T cd05106         289 -CVYTVQSDVWSYGILLWEIFS  309 (374)
T ss_pred             -CCCCccccHHHHHHHHHHHHh
Confidence             445567899999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.42  E-value=2.3e-12  Score=129.20  Aligned_cols=189  Identities=14%  Similarity=0.065  Sum_probs=116.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+...+       |+.||||...+-...                         + .          
T Consensus         7 ~~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~-------------------------~-~----------   43 (267)
T cd08228           7 EKKIGRGQFSEVYRATCLLD-------RKPVALKKVQIFEMM-------------------------D-A----------   43 (267)
T ss_pred             eeeeccCCCeeEEEEEEeCC-------CCEEEEEEeeccccC-------------------------C-H----------
Confidence            57899999999999998764       699999975532000                         0 0          


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i  441 (581)
                      ..+.++.+|...+.++.     +++  +++.+..  ......++|||++|.+|.+++.....     .......++..++
T Consensus        44 ~~~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~  116 (267)
T cd08228          44 KARQDCVKEIDLLKQLN-----HPN--VIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLC  116 (267)
T ss_pred             HHHHHHHHHHHHHHhCC-----Ccc--eeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHH
Confidence            01123344544443331     222  2222221  22345799999999999988753211     1111123444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+.......     ......-.+.++|.
T Consensus       117 ~~-l~~LH~~~i~H~dl~~~nil~~-------~~~------~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~~aPE~  177 (267)
T cd08228         117 SA-VEHMHSRRVMHRDIKPANVFIT-------ATG------VVKLGDLGLGRFFSSKTTAA-----HSLVGTPYYMSPER  177 (267)
T ss_pred             HH-HHHHhhCCeeCCCCCHHHEEEc-------CCC------CEEECccccceeccchhHHH-----hcCCCCccccChhh
Confidence            44 6779999999999999999998       666      89999999988765433210     01111123445665


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +... ......|.+.|+..+.+++.+
T Consensus       178 ~~~~-~~~~~~Di~slG~~l~el~~g  202 (267)
T cd08228         178 IHEN-GYNFKSDIWSLGCLLYEMAAL  202 (267)
T ss_pred             hccC-CCCchhhHHHHHHHHHHHhcC
Confidence            5432 233456888888888888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.42  E-value=1.4e-12  Score=130.91  Aligned_cols=194  Identities=13%  Similarity=0.033  Sum_probs=119.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|...++       |+.||||+.+......                        ...+.+       
T Consensus         7 ~~~l~~g~~g~v~~~~~~~~-------~~~v~ik~~~~~~~~~------------------------~~~~~~-------   48 (265)
T cd06652           7 GKLLGQGAFGRVYLCYDADT-------GRELAVKQVQFDPESP------------------------ETSKEV-------   48 (265)
T ss_pred             eeEEecCCceEEEEEEEcCC-------CcEEEEEEeecCcCCc------------------------ccHHHH-------
Confidence            57899999999999999775       6999999865431100                        000000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a  443 (581)
                         -.+.+|...+.++.     ++++  ++.+...    ....+++|||++|.+|.+++..... .......++..++.+
T Consensus        49 ---~~~~~E~~~l~~l~-----h~~i--~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~  118 (265)
T cd06652          49 ---NALECEIQLLKNLL-----HERI--VQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEG  118 (265)
T ss_pred             ---HHHHHHHHHHHhcC-----CCCe--eeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence               12344555555442     2222  2222111    1234589999999999998754221 112223445444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|.||+++       .++      .++|+|||++..+.......  .-.........+.+.|.+.
T Consensus       119 -l~~lH~~~i~H~dl~p~nil~~-------~~~------~~~l~Dfg~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  182 (265)
T cd06652         119 -VSYLHSNMIVHRDIKGANILRD-------SVG------NVKLGDFGASKRLQTICLSG--TGMKSVTGTPYWMSPEVIS  182 (265)
T ss_pred             -HHHHHhCCEecCCCCHHHEEec-------CCC------CEEECcCccccccccccccc--cccccCCCCccccChhhhc
Confidence             7889999999999999999998       666      89999999887654211000  0000111223455666654


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . .......|.++|+..+.+++.+
T Consensus       183 ~-~~~~~~~Dv~slG~il~el~~g  205 (265)
T cd06652         183 G-EGYGRKADIWSVGCTVVEMLTE  205 (265)
T ss_pred             C-CCCCcchhHHHHHHHHHHHhhC
Confidence            3 3344567999999999988876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.42  E-value=9.6e-13  Score=131.92  Aligned_cols=189  Identities=15%  Similarity=0.106  Sum_probs=113.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||.....-.    .+                                .
T Consensus         7 ~~~ig~g~~g~v~~~~~~~~-------~~~~~vK~~~~~~~----~~--------------------------------~   43 (267)
T cd08229           7 EKKIGRGQFSEVYRATCLLD-------GVPVALKKVQIFDL----MD--------------------------------A   43 (267)
T ss_pred             hhhhcccCCeEEEEEeecCC-------CceEEEEeeeehhh----hh--------------------------------H
Confidence            47899999999999998764       68999996442100    00                                0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcc-----hhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGH-----ERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~-----~~~~~~la~~~i  441 (581)
                      ...-++.+|.+.+..+.     +++  +++.+..+  ....+++|||++|.+|.+++......     ......++..++
T Consensus        44 ~~~~~~~~e~~~l~~~~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~  116 (267)
T cd08229          44 KARADCIKEIDLLKQLN-----HPN--VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC  116 (267)
T ss_pred             HHHHHHHHHHHHHHHcc-----CCc--hhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence            01123344444333321     122  22222222  23457999999999999987642111     111123333444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      ++ +..||..|++|+|++|.||+++       .++      .++++|||++..+.......     ........+.++|.
T Consensus       117 ~~-l~~LH~~~i~H~dl~p~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~ape~  177 (267)
T cd08229         117 SA-LEHMHSRRVMHRDIKPANVFIT-------ATG------VVKLGDLGLGRFFSSKTTAA-----HSLVGTPYYMSPER  177 (267)
T ss_pred             HH-HHHHHHCCeecCCCCHHHEEEc-------CCC------CEEECcchhhhccccCCccc-----ccccCCcCccCHHH
Confidence            43 7789999999999999999998       666      89999999887654322110     01111223344554


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. .......|.++|+..+.+++.+
T Consensus       178 ~~~-~~~~~~~Dv~slG~il~~l~~g  202 (267)
T cd08229         178 IHE-NGYNFKSDIWSLGCLLYEMAAL  202 (267)
T ss_pred             hcC-CCccchhhHHHHHHHHHHHHhC
Confidence            432 2233456888888888888766

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.42  E-value=1.7e-12  Score=140.54  Aligned_cols=85  Identities=15%  Similarity=0.161  Sum_probs=56.8

Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.|||++       .++      .++|+|||++..+.......-..   .......+.++|.+..
T Consensus       250 L~~LH~~~ivH~dikp~Nill~-------~~~------~~kL~DfGla~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~  313 (400)
T cd05105         250 MEFLASKNCVHRDLAARNVLLA-------QGK------IVKICDFGLARDIMHDSNYVSKG---STFLPVKWMAPESIFD  313 (400)
T ss_pred             HHHHHhCCeeCCCCChHhEEEe-------CCC------EEEEEeCCcceeccccccccccC---CcCCCcceEChhhhcC
Confidence            7789999999999999999998       666      89999999987654322110000   0000112445555533


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       .......|.|+|...+.+++.
T Consensus       314 -~~~~~~~DiwSlGvil~ellt  334 (400)
T cd05105         314 -NLYTTLSDVWSYGILLWEIFS  334 (400)
T ss_pred             -CCCCchhhHHHHHHHHHHHHH
Confidence             334456799999998888764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.42  E-value=1e-12  Score=131.28  Aligned_cols=186  Identities=21%  Similarity=0.229  Sum_probs=113.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.        +..||+|....+-.                                       
T Consensus         9 ~~~lg~G~~~~vy~~~~~~--------~~~~a~K~~~~~~~---------------------------------------   41 (256)
T cd05114           9 MKELGSGQFGVVHLGKWRA--------QIKVAIKAINEGAM---------------------------------------   41 (256)
T ss_pred             eeEecCCcCceEEEEEecc--------CceEEEEecccCCc---------------------------------------
Confidence            4679999999999999865        47899997554310                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                       .+-+|.+|+..+.++.     ++++.-...+.......++||||++|.+|.+++.....  .......++..++.+ +.
T Consensus        42 -~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~-l~  114 (256)
T cd05114          42 -SEEDFIEEAKVMMKLS-----HPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEG-ME  114 (256)
T ss_pred             -cHHHHHHHHHHHHHCC-----CCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHH-HH
Confidence             0123444555444432     22222111112233456899999999999998864222  111123344444443 67


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|++|+||+++       .++      .+++.|||++..+.......-.    .......+.+.|.+. ..
T Consensus       115 ~lH~~~i~H~dl~p~ni~i~-------~~~------~~kl~d~g~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~-~~  176 (256)
T cd05114         115 YLERNSFIHRDLAARNCLVS-------STG------VVKVSDFGMTRYVLDDEYTSSS----GAKFPVKWSPPEVFN-FS  176 (256)
T ss_pred             HHHHCCccccccCcceEEEc-------CCC------eEEECCCCCccccCCCceeccC----CCCCchhhCChhhcc-cC
Confidence            89999999999999999998       666      8999999988765432211100    000001234455432 22


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 008021          527 KQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ......|.++|+..+.+++.
T Consensus       177 ~~~~~~Di~s~G~~l~el~~  196 (256)
T cd05114         177 KYSSKSDVWSFGVLMWEVFT  196 (256)
T ss_pred             ccchhhhhHHHHHHHHHHHc
Confidence            33345688888888888776

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>PHA02988 hypothetical protein; Provisional

Probab=99.42  E-value=2.8e-12  Score=131.46  Aligned_cols=186  Identities=11%  Similarity=-0.014  Sum_probs=119.0

Q ss_pred             CceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       288 d~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      +...|++|+++.||+|...         |+.||||+.+.....                          -.+.++     
T Consensus        24 ~~~~i~~g~~~~v~~~~~~---------~~~vavK~~~~~~~~--------------------------~~~~~~-----   63 (283)
T PHA02988         24 TSVLIKENDQNSIYKGIFN---------NKEVIIRTFKKFHKG--------------------------HKVLID-----   63 (283)
T ss_pred             CCeEEeeCCceEEEEEEEC---------CEEEEEEeccccccc--------------------------cHHHHH-----
Confidence            3578999999999999983         599999986543110                          001111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCcccccccc---c---CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY---P---LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~---~---l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                           +|.+|...+.++.     +++  +.+.+.   +   -....++||||++|++|.+++..... .......++..+
T Consensus        64 -----~~~~E~~~l~~l~-----h~n--Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i  131 (283)
T PHA02988         64 -----ITENEIKNLRRID-----SNN--ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDC  131 (283)
T ss_pred             -----HHHHHHHHHHhcC-----CCC--EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHH
Confidence                 2345666665542     222  222221   1   12245799999999999999864221 111123344333


Q ss_pred             HHHHHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          441 THALLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       441 i~a~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      +.. +..+|. .|++|+|++|.||+++       .+|      .++++|||++..++......        ...-.+.++
T Consensus       132 ~~~-l~~lH~~~~~~Hrdlkp~nill~-------~~~------~~kl~dfg~~~~~~~~~~~~--------~~~~~y~aP  189 (283)
T PHA02988        132 CKG-LYNLYKYTNKPYKNLTSVSFLVT-------ENY------KLKIICHGLEKILSSPPFKN--------VNFMVYFSY  189 (283)
T ss_pred             HHH-HHHHHhcCCCCCCcCChhhEEEC-------CCC------cEEEcccchHhhhccccccc--------cCcccccCH
Confidence            333 677887 5999999999999999       667      89999999987654422111        111234566


Q ss_pred             HHHHhh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+... .......|.++|+..+.+++.+
T Consensus       190 E~~~~~~~~~~~k~Di~SlGvil~el~~g  218 (283)
T PHA02988        190 KMLNDIFSEYTIKDDIYSLGVVLWEIFTG  218 (283)
T ss_pred             HHhhhccccccchhhhhHHHHHHHHHHHC
Confidence            666543 4455678999999999999887

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.42  E-value=1.7e-12  Score=129.72  Aligned_cols=180  Identities=18%  Similarity=0.150  Sum_probs=112.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|...         |..||+|....+..                                       
T Consensus        11 ~~~lg~g~~~~v~~~~~~---------~~~~~~k~~~~~~~---------------------------------------   42 (256)
T cd05082          11 LQTIGKGEFGDVMLGDYR---------GNKVAVKCIKNDAT---------------------------------------   42 (256)
T ss_pred             eeeecccCCCeEEEEEEc---------CCcEEEEEeCCCch---------------------------------------
Confidence            478999999999999874         58899998543210                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~  444 (581)
                        .-++.+|+..+.++.     ++++ .+...+.......+++|||++|.+|.+++......   ......++..++.+ 
T Consensus        43 --~~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~-  114 (256)
T cd05082          43 --AQAFLAEASVMTQLR-----HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA-  114 (256)
T ss_pred             --HHHHHHHHHHHHhCC-----CCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH-
Confidence              012344554444331     1221 11111112223458999999999999988643221   11112334444433 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|+||+++       .++      .++|+|||++...........        ..-.+.+.|.+. 
T Consensus       115 l~~lH~~~i~H~dlkp~nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~~--------~~~~y~aPE~~~-  172 (256)
T cd05082         115 MEYLEANNFVHRDLAARNVLVS-------EDN------VAKVSDFGLTKEASSTQDTGK--------LPVKWTAPEALR-  172 (256)
T ss_pred             HHHHHhCCEeccccchheEEEc-------CCC------cEEecCCccceeccccCCCCc--------cceeecCHHHHc-
Confidence            7889999999999999999998       667      899999999876543221100        011345555543 


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ........|.++|+..+.+++.
T Consensus       173 ~~~~~~~~Dv~slG~i~~~l~~  194 (256)
T cd05082         173 EKKFSTKSDVWSFGILLWEIYS  194 (256)
T ss_pred             cCCCCchhhhHHHHHHHHHHHh
Confidence            2334456789999988888875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.41  E-value=1.9e-12  Score=131.96  Aligned_cols=196  Identities=14%  Similarity=0.040  Sum_probs=113.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.....    .+|+.||+|+........                      .       ....   
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~----~~g~~~aiK~~~~~~~~~----------------------~-------~~~~---   48 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGH----DSGKLYAMKVLKKATIVQ----------------------K-------AKTT---   48 (290)
T ss_pred             eeeeccCCcceEEEEEeccCC----CCCceEEEEEeehhhhhh----------------------c-------chHH---
Confidence            467999999999999985311    126899999865421000                      0       0000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcch-hhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHE-RLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~-~~~~~la~~~i~a~l  445 (581)
                         -.+.+|.+.+.++.    +.+.+  +..+.  +.....++||||++|.+|.+++....... .....++..++. .+
T Consensus        49 ---~~~~~e~~~l~~l~----~~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~-al  118 (290)
T cd05613          49 ---EHTRTERQVLEHIR----QSPFL--VTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVL-AL  118 (290)
T ss_pred             ---HHHHHHHHHHHhcc----cCCCh--hceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHH-HH
Confidence               01123333333332    22222  22221  12234469999999999999875422111 111222223333 37


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .++      +++|+|||++..+.........    .......+.++|.+...
T Consensus       119 ~~lH~~~i~H~dl~p~nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~  181 (290)
T cd05613         119 EHLHKLGIIYRDIKLENILLD-------SNG------HVVLTDFGLSKEFHEDEVERAY----SFCGTIEYMAPDIVRGG  181 (290)
T ss_pred             HHHHhCCeeccCCCHHHeEEC-------CCC------CEEEeeCccceecccccccccc----cccCCcccCChhhccCC
Confidence            889999999999999999998       666      8999999998876543211110    01111223455554321


Q ss_pred             -cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 -SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 -~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .......|.+.|+..+.+++.+
T Consensus       182 ~~~~~~~~Dv~slG~~l~~ll~g  204 (290)
T cd05613         182 DGGHDKAVDWWSMGVLMYELLTG  204 (290)
T ss_pred             CCCCCccccHHHHHHHHHHHhcC
Confidence             1223457888888888888766

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.41  E-value=2.2e-12  Score=130.45  Aligned_cols=187  Identities=14%  Similarity=0.121  Sum_probs=114.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+...+       |+.||||+.+.+....                            ..       
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~~----------------------------~~-------   42 (284)
T cd07836           5 LEKLGEGTYATVYKGRNRTT-------GEIVALKEIHLDAEEG----------------------------TP-------   42 (284)
T ss_pred             eeeeccCCceEEEEEEECCC-------CeEEEEEEeccccccc----------------------------ch-------
Confidence            57899999999999999764       7999999876442110                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc----chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG----HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~----~~~~~~~la~~~i~  442 (581)
                         -.+.+|...+.++.     +++  +++.+..  .....+|||||++| ++.+++.....    .......++..++.
T Consensus        43 ---~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~  111 (284)
T cd07836          43 ---STAIREISLMKELK-----HEN--IVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLK  111 (284)
T ss_pred             ---HHHHHHHHHHHhhc-----CCC--EeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence               01123444444332     222  2233222  23456899999998 77777654221    11112234444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..+|..|++|+|++|.||+++       +++      .++|+|||++..+.......-.     -.....+.+.|.+
T Consensus       112 ~-l~~lH~~~i~h~dl~p~ni~~~-------~~~------~~~l~d~g~~~~~~~~~~~~~~-----~~~~~~y~~PE~~  172 (284)
T cd07836         112 G-IAFCHENRVLHRDLKPQNLLIN-------KRG------ELKLADFGLARAFGIPVNTFSN-----EVVTLWYRAPDVL  172 (284)
T ss_pred             H-HHHHHHCCeeeCCCCHHHEEEC-------CCC------cEEEeecchhhhhcCCcccccc-----ccccccccChHHh
Confidence            4 6788999999999999999998       667      8999999998765432111000     0011234445554


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..-.......|.++|+..+.+++.+
T Consensus       173 ~~~~~~~~~~Dv~slG~~l~~l~~g  197 (284)
T cd07836         173 LGSRTYSTSIDIWSVGCIMAEMITG  197 (284)
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            3322334456888888888888876

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.41  E-value=1.2e-12  Score=131.48  Aligned_cols=187  Identities=16%  Similarity=0.083  Sum_probs=113.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       ++.||||+.+.......                                    
T Consensus        14 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~~------------------------------------   50 (267)
T cd06645          14 IQRIGSGTYGDVYKARNVNT-------GELAAIKVIKLEPGEDF------------------------------------   50 (267)
T ss_pred             HHHhCCCCCeEEEEEEEcCC-------CcEEEEEEEecCchhHH------------------------------------
Confidence            46799999999999998764       69999999765421100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         ..+.+|...+..+     +++++.  +.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        51 ---~~~~~e~~~~~~l-----~h~~ii--~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~-l  119 (267)
T cd06645          51 ---AVVQQEIIMMKDC-----KHSNIV--AYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQG-L  119 (267)
T ss_pred             ---HHHHHHHHHHHhC-----CCCCee--eEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               0111222222211     112211  1111  112344799999999999998754221 111122334444443 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh-
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR-  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~-  524 (581)
                      ..+|..|++|+|++|+||+++       .++      .++|+|||++..+.......     ........+.+.|.+.. 
T Consensus       120 ~~lH~~~i~H~dlkp~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~  181 (267)
T cd06645         120 YYLHSKGKMHRDIKGANILLT-------DNG------HVKLADFGVSAQITATIAKR-----KSFIGTPYWMAPEVAAVE  181 (267)
T ss_pred             HHHHHCCeecCCCCHHHEEEC-------CCC------CEEECcceeeeEccCccccc-----ccccCcccccChhhhccc
Confidence            788999999999999999998       666      89999999987664321110     00011223455665531 


Q ss_pred             -hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 -LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 -l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .+......|.|+|+..+.+++.+
T Consensus       182 ~~~~~~~~~DvwSlG~il~~l~~~  205 (267)
T cd06645         182 RKGGYNQLCDIWAVGITAIELAEL  205 (267)
T ss_pred             cCCCCCchhhhHHHHHHHHHHhcC
Confidence             22344567899998888888765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.41  E-value=1.8e-12  Score=129.55  Aligned_cols=184  Identities=17%  Similarity=0.157  Sum_probs=115.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|.+..        ++.||||+..++...                                      
T Consensus        11 ~~~ig~g~~~~v~~~~~~~--------~~~~~vK~~~~~~~~--------------------------------------   44 (261)
T cd05034          11 ERKLGAGQFGEVWMGTWNG--------TTKVAVKTLKPGTMS--------------------------------------   44 (261)
T ss_pred             eeeeccCcceEEEEEEEcC--------CceEEEEEecCCccC--------------------------------------
Confidence            4789999999999999764        488999987764210                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a  443 (581)
                        .-++.+|...+.++.     +++  +++.+.  ......+++|||++|.+|.+++....+.   ......++..++.+
T Consensus        45 --~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~a  115 (261)
T cd05034          45 --PEAFLQEAQIMKKLR-----HDK--LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEG  115 (261)
T ss_pred             --HHHHHHHHHHHhhCC-----CCC--EeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHH
Confidence              012233444443321     222  223322  2224568999999999999988643211   11122344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|.||+++       .++      .++|+|||.+..+...........    .....+.+.|.+.
T Consensus       116 -l~~lh~~~i~h~di~p~nili~-------~~~------~~~l~d~g~~~~~~~~~~~~~~~~----~~~~~y~~PE~~~  177 (261)
T cd05034         116 -MAYLESRNYIHRDLAARNILVG-------ENL------VCKIADFGLARLIEDDEYTAREGA----KFPIKWTAPEAAN  177 (261)
T ss_pred             -HHHHHhCCcccCCcchheEEEc-------CCC------CEEECccccceeccchhhhhhhcc----CCCccccCHHHhc
Confidence             6788999999999999999998       666      899999999887754221110000    0011244555443


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      . .......|.++|+..+.++++
T Consensus       178 ~-~~~~~~~Di~slG~il~~l~t  199 (261)
T cd05034         178 Y-GRFTIKSDVWSFGILLTEIVT  199 (261)
T ss_pred             c-CCcCchhHHHHHHHHHHHHHh
Confidence            2 233345688999888888876

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.41  E-value=2.5e-12  Score=128.45  Aligned_cols=189  Identities=15%  Similarity=0.082  Sum_probs=115.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|....+       |+.||+|..++....                         +  .   .     
T Consensus         7 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~-------------------------~--~---~-----   44 (267)
T cd08224           7 EKKIGKGQFSVVYKAICLLD-------GRVVALKKVQIFEMM-------------------------D--A---K-----   44 (267)
T ss_pred             eeeeccCCceEEEEEEEcCC-------CCEEEEEEeeccccc-------------------------c--h---h-----
Confidence            57899999999999999854       699999986542100                         0  0   0     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i  441 (581)
                       ..-++.+|.+.+.++.     ++++  ++.+.  .......++|||++|.+|.+++.....     .......++..++
T Consensus        45 -~~~~~~~ei~~l~~~~-----~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~  116 (267)
T cd08224          45 -ARQDCLKEIDLLKQLD-----HPNV--IKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC  116 (267)
T ss_pred             -hHHHHHHHHHHHHhCC-----CCCe--eeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHH
Confidence             0112233433333221     1221  22221  122345799999999999998754211     1111122333344


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..+|..|++|+|++|.||+++       .+|      .++|+|||++..+........     .......+.+.|.
T Consensus       117 ~~-l~~lh~~~i~h~dl~p~nil~~-------~~~------~~~l~d~~~~~~~~~~~~~~~-----~~~~~~~y~apE~  177 (267)
T cd08224         117 SA-LEHMHSKRIMHRDIKPANVFIT-------ATG------VVKLGDLGLGRFFSSKTTAAH-----SLVGTPYYMSPER  177 (267)
T ss_pred             HH-HHHHHhCCEecCCcChhhEEEC-------CCC------cEEEeccceeeeccCCCcccc-----eecCCccccCHHH
Confidence            43 6778999999999999999998       666      899999999876654321110     0011223455665


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. .......|.+.|+..+.+++.+
T Consensus       178 ~~~-~~~~~~~Di~slG~il~~l~~g  202 (267)
T cd08224         178 IHE-NGYNFKSDIWSLGCLLYEMAAL  202 (267)
T ss_pred             hcc-CCCCchhcHHHHHHHHHHHHHC
Confidence            533 2334467999999998888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.41  E-value=2e-12  Score=128.90  Aligned_cols=191  Identities=19%  Similarity=0.155  Sum_probs=114.5

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|....+ .|   ....||||+..++...                            +          
T Consensus         1 ~~ig~g~~~~v~~~~~~~~-~~---~~~~vaiK~~~~~~~~----------------------------~----------   38 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTS-GG---KVIPVAVKCLKSDKLS----------------------------D----------   38 (257)
T ss_pred             CcCCccCcccEEeeeEecC-CC---CceEEEEeecCCcccH----------------------------H----------
Confidence            4689999999999998652 11   1347999987765321                            0          


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCc-ccccccccCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHALL  445 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~l  445 (581)
                      ..-++.+|.+.+.++.     ++++ .+.....+  ....+||||++|.+|.+++.....   .......++..++.+ +
T Consensus        39 ~~~~~~~e~~~l~~l~-----h~~iv~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~-L  110 (257)
T cd05040          39 IMDDFLKEAAIMHSLD-----HENLIRLYGVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANG-M  110 (257)
T ss_pred             HHHHHHHHHHHHhhcC-----CCCccceeEEEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHH-H
Confidence            0112233444443332     1221 11111222  456799999999999998865321   111122334444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||.||+++       .++      .++|+|||++..+...........  .......+.++|.+. .
T Consensus       111 ~~lH~~~i~H~di~p~nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~--~~~~~~~y~~pE~~~-~  174 (257)
T cd05040         111 RYLESKRFIHRDLAARNILLA-------SDD------KVKIGDFGLMRALPQNEDHYVMEE--HLKVPFAWCAPESLR-T  174 (257)
T ss_pred             HHHHhCCccccccCcccEEEe-------cCC------EEEeccccccccccccccceeccc--CCCCCceecCHHHhc-c
Confidence            788999999999999999999       666      899999999887754321100000  000111334445432 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.++|+..+.++++
T Consensus       175 ~~~~~~~Di~slG~~l~el~t  195 (257)
T cd05040         175 RTFSHASDVWMFGVTLWEMFT  195 (257)
T ss_pred             cCcCchhhhHHHHHHHHHHHh
Confidence            334445788888888888875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.41  E-value=2.2e-12  Score=135.69  Aligned_cols=145  Identities=20%  Similarity=0.215  Sum_probs=99.1

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|+ -+-+|.|.+|.||.|.++.+       +...|+||.-...-   ...    +.+                      
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t-------~~~fAmKVmdK~~l---~~r----kKl----------------------  121 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGT-------NCLFAMKVMDKESL---ASR----KKL----------------------  121 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCC-------CceEEEEEecHHHH---hhh----hHH----------------------
Confidence            344 46799999999999999875       68999999643210   000    000                      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCc--EEEEeccCCccHHHHHHhhhcc----hhhHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA--VLVETYEQGECVSRYVDELQGH----ERLKSALAH  438 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~--VLVmEyi~G~~L~~~l~~~~~~----~~~~~~la~  438 (581)
                           ..  ...|..-+       ...++--+|..|..+.+.+  +||||||+|+.|..+.+...+.    ...+--.|+
T Consensus       122 -----~R--a~tE~eIL-------~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAE  187 (459)
T KOG0610|consen  122 -----KR--AQTEREIL-------SLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAE  187 (459)
T ss_pred             -----HH--HHHHHHHH-------HhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHH
Confidence                 00  01122222       2234455788888887776  6899999999999887653321    111222333


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      .+  ..|+.||--|||.|||||+||||+       .+|      +|.|.||-++...
T Consensus       188 vl--~ALEYLHmlGivYRDLKPENILvr-------edG------HIMLsDFDLS~~~  229 (459)
T KOG0610|consen  188 VL--LALEYLHMLGIVYRDLKPENILVR-------EDG------HIMLSDFDLSLRC  229 (459)
T ss_pred             HH--HHHHHHHhhceeeccCCcceeEEe-------cCC------cEEeeeccccccC
Confidence            33  358999999999999999999999       889      9999999987654

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.41  E-value=1.3e-12  Score=130.62  Aligned_cols=186  Identities=15%  Similarity=0.151  Sum_probs=114.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....        ++.||||...++-..                              .       
T Consensus        11 ~~~lg~g~~g~v~~~~~~~--------~~~v~iK~~~~~~~~------------------------------~-------   45 (261)
T cd05072          11 VKKLGAGQFGEVWMGYYNN--------STKVAVKTLKPGTMS------------------------------V-------   45 (261)
T ss_pred             eeecCCcCCceEEEEEecC--------CceEEEEEccCCchh------------------------------H-------
Confidence            4789999999999999754        578999986653110                              0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchh---hHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER---LKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~---~~~~la~~~i~a~l  445 (581)
                         -++.+|...+.++.     ++++.-...+.......+++|||++|.+|.+++........   ....++..++.+ +
T Consensus        46 ---~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~-l  116 (261)
T cd05072          46 ---QAFLEEANLMKTLQ-----HDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG-M  116 (261)
T ss_pred             ---HHHHHHHHHHHhCC-----CCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH-H
Confidence               01233444443331     22222111122223445899999999999998864322111   112233333333 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .++      .++|.|||++..+.........    .......+.+.|.+. .
T Consensus       117 ~~LH~~~i~H~dl~p~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~-~  178 (261)
T cd05072         117 AYIERKNYIHRDLRAANVLVS-------ESL------MCKIADFGLARVIEDNEYTARE----GAKFPIKWTAPEAIN-F  178 (261)
T ss_pred             HHHHHCCeeccccchhhEEec-------CCC------cEEECCCccceecCCCceeccC----CCccceecCCHHHhc-c
Confidence            889999999999999999998       666      8999999999876543211100    000011244555442 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +......|.++|+..+.++++
T Consensus       179 ~~~~~~~Di~slG~~l~~l~t  199 (261)
T cd05072         179 GSFTIKSDVWSFGILLYEIVT  199 (261)
T ss_pred             CCCChhhhhhhhHHHHHHHHc
Confidence            334445788888888888886

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.41  E-value=1.3e-12  Score=134.28  Aligned_cols=189  Identities=16%  Similarity=0.092  Sum_probs=118.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||.........                                     
T Consensus        25 ~~~lg~g~~~~v~~~~~~~~-------~~~v~ik~~~~~~~~~-------------------------------------   60 (296)
T cd06654          25 FEKIGQGASGTVYTAMDVAT-------GQEVAIRQMNLQQQPK-------------------------------------   60 (296)
T ss_pred             EEEecCCCCeEEEEEEECCC-------CcEEEEEEEecCCcch-------------------------------------
Confidence            46799999999999998754       6899999764331100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                        .-.+.+|...+.++     +++++.-..-........++||||++|.+|.+++............++..++.+ +..+
T Consensus        61 --~~~~~~e~~~l~~~-----~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~a-L~~L  132 (296)
T cd06654          61 --KELIINEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-LEFL  132 (296)
T ss_pred             --HHHHHHHHHHHHhC-----CCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHH-HHHH
Confidence              01123343333322     122222111111123456899999999999998864322222223344444444 6788


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|++|.||+++       .++      .++|+|||++..+.......-     .......+.+.|.+.. ...
T Consensus       133 H~~gi~H~dLkp~Nill~-------~~~------~~kl~dfg~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~-~~~  193 (296)
T cd06654         133 HSNQVIHRDIKSDNILLG-------MDG------SVKLTDFGFCAQITPEQSKRS-----TMVGTPYWMAPEVVTR-KAY  193 (296)
T ss_pred             HHCCcccCCCCHHHEEEc-------CCC------CEEECccccchhccccccccC-----cccCCccccCHHHHcC-CCC
Confidence            999999999999999998       666      899999999876654332110     0011223455665533 334


Q ss_pred             CCCCCHHHHHHHHHHhhhHh
Q 008021          529 QNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ....|.++|+..+.+++.+.
T Consensus       194 ~~~~Dv~s~Gvil~~l~~g~  213 (296)
T cd06654         194 GPKVDIWSLGIMAIEMIEGE  213 (296)
T ss_pred             CccchHHHHHHHHHHHHhCC
Confidence            45679999999999988763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.41  E-value=1.7e-12  Score=129.29  Aligned_cols=187  Identities=18%  Similarity=0.104  Sum_probs=116.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+...+       |+.|+||+..+.....                                     
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~-------~~~~~vk~~~~~~~~~-------------------------------------   41 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPT-------GKIYALKKIHVDGDEE-------------------------------------   41 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCC-------CcEEEEEEeccCcchH-------------------------------------
Confidence            47899999999999999875       6999999876652210                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                       ..-++.+|.+.+.++.     +++  +++.+.  ......++||||++|.+|.+++..... .......++..++++ +
T Consensus        42 -~~~~~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~-l  112 (264)
T cd06623          42 -FRKQLLRELKTLRSCE-----SPY--VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKG-L  112 (264)
T ss_pred             -HHHHHHHHHHHHHhcC-----CCC--eeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence             0112344544444432     122  222221  223456899999999999999864221 222223444455544 7


Q ss_pred             HHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..+|. .|++|+|++|+||+++       .++      .++|+|||++..+.......-     .......+.+.|.+ .
T Consensus       113 ~~lh~~~~~~H~~l~~~ni~~~-------~~~------~~~l~df~~~~~~~~~~~~~~-----~~~~~~~y~~pE~~-~  173 (264)
T cd06623         113 DYLHTKRHIIHRDIKPSNLLIN-------SKG------EVKIADFGISKVLENTLDQCN-----TFVGTVTYMSPERI-Q  173 (264)
T ss_pred             HHHhccCCCccCCCCHHHEEEC-------CCC------CEEEccCccceecccCCCccc-----ceeecccccCHhhh-C
Confidence            78999 9999999999999998       666      899999999887654332210     00001112233332 2


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....+...|.++|+..+.+++.+
T Consensus       174 ~~~~~~~~Dv~slG~il~~l~tg  196 (264)
T cd06623         174 GESYSYAADIWSLGLTLLECALG  196 (264)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhC
Confidence            22333456777777777777665

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.41  E-value=6.2e-13  Score=134.68  Aligned_cols=122  Identities=15%  Similarity=0.159  Sum_probs=79.0

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          406 PAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      ..+++|||++| ++.+++.....  .......++..++++ +..||..|++|+|+||+||+++       .++      .
T Consensus        73 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~a-l~~LH~~~i~H~dl~~~nil~~-------~~~------~  137 (284)
T cd07839          73 KLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKG-LAFCHSHNVLHRDLKPQNLLIN-------KNG------E  137 (284)
T ss_pred             ceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHHHHHCCEecCCCCHHHEEEc-------CCC------c
Confidence            45799999987 66666543211  111223344444444 7889999999999999999998       666      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++..+....+..     ......-.+.++|.+..........|.++|+..+.+++++
T Consensus       138 ~~l~dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg  196 (284)
T cd07839         138 LKLADFGLARAFGIPVRCY-----SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA  196 (284)
T ss_pred             EEECccchhhccCCCCCCc-----CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhc
Confidence            9999999987654322110     0001112345666664433344567999999999998865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.41  E-value=1.4e-12  Score=130.62  Aligned_cols=184  Identities=17%  Similarity=0.168  Sum_probs=115.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|....        +..||+|..+++...                                      
T Consensus        11 ~~~ig~g~~~~v~~~~~~~--------~~~~~~k~~~~~~~~--------------------------------------   44 (260)
T cd05070          11 IKKLGNGQFGEVWMGTWNG--------NTKVAVKTLKPGTMS--------------------------------------   44 (260)
T ss_pred             hheeccccCceEEEEEecC--------CceeEEEEecCCCCC--------------------------------------
Confidence            4679999999999998754        578999998765211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~  444 (581)
                        +-++.+|..-+.++.     ++++ .+....  .....+++|||++|.+|.+++.....   .......++..++.+ 
T Consensus        45 --~~~~~~E~~~l~~l~-----~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a-  114 (260)
T cd05070          45 --PESFLEEAQIMKKLR-----HDKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG-  114 (260)
T ss_pred             --HHHHHHHHHHHHhcC-----CCceEEEEeEE--CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH-
Confidence              012334444443332     1221 111111  23446899999999999998864221   111123344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       +++      .++|+|||++..+...........    ...-.+.++|.+. 
T Consensus       115 l~~lH~~~i~H~di~p~Nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~~----~~~~~y~aPE~~~-  176 (260)
T cd05070         115 MAYIERMNYIHRDLRSANILVG-------DGL------VCKIADFGLARLIEDNEYTARQGA----KFPIKWTAPEAAL-  176 (260)
T ss_pred             HHHHHHCCcccCCCccceEEEe-------CCc------eEEeCCceeeeeccCcccccccCC----CCCccccChHHHh-
Confidence            6788999999999999999998       666      899999999987654321110000    0011245556543 


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ........|.++|+..+.+++.
T Consensus       177 ~~~~~~~~Di~slG~~l~~l~~  198 (260)
T cd05070         177 YGRFTIKSDVWSFGILLTELVT  198 (260)
T ss_pred             cCCCcchhhhHHHHHHHHHHHh
Confidence            2344456788999988888876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.41  E-value=2.7e-12  Score=128.05  Aligned_cols=181  Identities=19%  Similarity=0.147  Sum_probs=112.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|...         |+.||||.......                                       
T Consensus        11 ~~~ig~g~~g~v~~~~~~---------~~~v~iK~~~~~~~---------------------------------------   42 (256)
T cd05039          11 GATIGKGEFGDVMLGDYR---------GQKVAVKCLKDDST---------------------------------------   42 (256)
T ss_pred             eeeeecCCCceEEEEEec---------CcEEEEEEeccchh---------------------------------------
Confidence            578999999999999874         58999998654311                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~l  445 (581)
                       ..-.+.+|...+.++.     ++++.-...+.......++||||++|.+|.+++.....   .......++..++.+ +
T Consensus        43 -~~~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~-l  115 (256)
T cd05039          43 -AAQAFLAEASVMTTLR-----HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEG-M  115 (256)
T ss_pred             -HHHHHHHHHHHHHhcC-----CcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH-H
Confidence             0011223333333321     12221111111224566899999999999999865321   112223344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||+||+++       .+|      .++|+|||.+...+......        .....+.++|.+. .
T Consensus       116 ~~lh~~~i~H~di~p~Nili~-------~~~------~~~l~d~g~~~~~~~~~~~~--------~~~~~~~ape~~~-~  173 (256)
T cd05039         116 EYLEEKNFVHRDLAARNVLVS-------EDL------VAKVSDFGLAKEASQGQDSG--------KLPVKWTAPEALR-E  173 (256)
T ss_pred             HHHHhCCccchhcccceEEEe-------CCC------CEEEcccccccccccccccC--------CCcccccCchhhc-C
Confidence            789999999999999999998       666      89999999988774332211        0112344455442 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +......|.+.|+..+.+++.
T Consensus       174 ~~~~~~~Di~slG~il~~l~~  194 (256)
T cd05039         174 KKFSTKSDVWSFGILLWEIYS  194 (256)
T ss_pred             CcCCcHHHHHHHHHHHHHHHh
Confidence            334445688888888777764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.41  E-value=2.7e-12  Score=127.67  Aligned_cols=190  Identities=14%  Similarity=0.065  Sum_probs=114.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||.|++|.||+|+.+.+       ++.||||....+....                           ...       
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~~---------------------------~~~-------   43 (257)
T cd08223           5 VRVVGKGSYGEVSLVRHRTD-------GKQYVIKKLNLRNASR---------------------------RER-------   43 (257)
T ss_pred             EEEecCCCCeEEEEEEEcCC-------CcEEEEEEEehhhcCH---------------------------HHH-------
Confidence            47899999999999999764       6899999854221000                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-cccccccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~  444 (581)
                         -.+.+|...+.++.     ++++. +...+.......+++|||++|.+|.+++......   ......++..++.+ 
T Consensus        44 ---~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~-  114 (257)
T cd08223          44 ---KAAEQEAQLLSQLK-----HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMA-  114 (257)
T ss_pred             ---HHHHHHHHHHHhCC-----CCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH-
Confidence               01233433333321     12211 1111111122347999999999999988642211   11122334344433 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       .++      .++|+|||++..+......     .........+.+.|.+..
T Consensus       115 l~~lH~~~i~H~di~p~nil~~-------~~~------~~~l~df~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~  176 (257)
T cd08223         115 LQYLHEKHILHRDLKTQNVFLT-------RTN------IIKVGDLGIARVLENQCDM-----ASTLIGTPYYMSPELFSN  176 (257)
T ss_pred             HHHHHhCCeeccCCCchhEEEe-------cCC------cEEEecccceEEecccCCc-----cccccCCcCccChhHhcC
Confidence            7889999999999999999998       666      8999999998766432210     001112223455555433


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       +......|.++|+..+.+++++
T Consensus       177 -~~~~~~~Dv~slG~il~~l~~g  198 (257)
T cd08223         177 -KPYNYKSDVWALGCCVYEMATL  198 (257)
T ss_pred             -CCCCchhhhHHHHHHHHHHHcC
Confidence             3344567889998888888766

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.41  E-value=1.2e-12  Score=131.35  Aligned_cols=192  Identities=21%  Similarity=0.259  Sum_probs=111.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|++..+  |  .....||||..+++.....                                    
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~--~--~~~~~~~ik~~~~~~~~~~------------------------------------   49 (268)
T cd05063          10 QKVIGAGEFGEVFRGILKMP--G--RKEVAVAIKTLKPGYTEKQ------------------------------------   49 (268)
T ss_pred             eeEecCCCCccEEEEEEecC--C--CCceEEEEEeccccCCHHH------------------------------------
Confidence            67899999999999999753  2  1134899998765522110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                        .-++.+|++.+.++.     +++  +.+.+.  ......++||||++|.+|.+++....+.  ......++..++.+ 
T Consensus        50 --~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~a-  119 (268)
T cd05063          50 --RQDFLSEASIMGQFS-----HHN--IIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAG-  119 (268)
T ss_pred             --HHHHHHHHHHHhcCC-----CCC--eeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-
Confidence              012334444333221     122  222221  1223458999999999999988643221  11122333333433 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||.||+++       .++      .++++|||+...+.......+.....  .....+.++|.+..
T Consensus       120 l~~lH~~~i~H~dlkp~Nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~--~~~~~y~~PE~~~~  184 (268)
T cd05063         120 MKYLSDMNYVHRDLAARNILVN-------SNL------ECKVSDFGLSRVLEDDPEGTYTTSGG--KIPIRWTAPEAIAY  184 (268)
T ss_pred             HHHHHHCCeeccccchhhEEEc-------CCC------cEEECCCccceecccccccceeccCC--CcCceecCHHHhhc
Confidence            7889999999999999999998       566      89999999988665433222110000  00001334443322


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       .......|.++|+..+.+++.
T Consensus       185 -~~~~~~~Dv~slG~il~ell~  205 (268)
T cd05063         185 -RKFTSASDVWSFGIVMWEVMS  205 (268)
T ss_pred             -CCcChHhHHHHHHHHHHHHHh
Confidence             233345577777777766554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.41  E-value=8.2e-13  Score=133.77  Aligned_cols=123  Identities=20%  Similarity=0.151  Sum_probs=80.4

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ..++||||++|.++.++...... .......++..++.+ +..||..|++|+|++|.||+++       +++      .+
T Consensus        74 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~-l~~LH~~~i~h~~l~p~ni~~~-------~~~------~~  139 (286)
T cd07846          74 RLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRG-IEFCHSHNIIHRDIKPENILVS-------QSG------VV  139 (286)
T ss_pred             eEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHH-HHHHHHCCccccCCCHHHEEEC-------CCC------cE
Confidence            35799999999999887643211 112223344444443 6788999999999999999998       666      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++..+.......     ........+.+.|.+..-.......|.++|+..+.+++.+
T Consensus       140 ~l~dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g  197 (286)
T cd07846         140 KLCDFGFARTLAAPGEVY-----TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTG  197 (286)
T ss_pred             EEEeeeeeeeccCCcccc-----CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcC
Confidence            999999988765433210     0011122334455543323333457889999888888876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=1.2e-12  Score=132.15  Aligned_cols=189  Identities=18%  Similarity=0.119  Sum_probs=117.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.......                            +..       
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~----------------------------~~~-------   43 (274)
T cd06609           6 LECIGKGSFGEVYKAIDKRT-------NQVVAIKVIDLEEAE----------------------------DEI-------   43 (274)
T ss_pred             hhhhcCCCCeEEEEEEECCC-------CeEEEEEEeeccccc----------------------------hHH-------
Confidence            36799999999999999764       699999986432100                            000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                         -++.+|.+.+.++.     ++++.-+..+.......++|+||++|.+|.+++............++..++.+ +..+
T Consensus        44 ---~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~-l~~l  114 (274)
T cd06609          44 ---EDIQQEIQFLSQCR-----SPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLG-LEYL  114 (274)
T ss_pred             ---HHHHHHHHHHHHcC-----CCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHH-HHHH
Confidence               11233433333321     22222221122223456799999999999998865322222223344444444 6678


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|++|.||+++       .+|      .++|+|||++..+........     .......+.+.|.+.... .
T Consensus       115 h~~~i~h~dl~p~ni~i~-------~~~------~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~y~~PE~~~~~~-~  175 (274)
T cd06609         115 HEEGKIHRDIKAANILLS-------EEG------DVKLADFGVSGQLTSTMSKRN-----TFVGTPFWMAPEVIKQSG-Y  175 (274)
T ss_pred             HhCCcccCCCCHHHEEEC-------CCC------CEEEcccccceeecccccccc-----cccCCccccChhhhccCC-C
Confidence            999999999999999999       666      899999999988765421110     011122345566554322 4


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.+.|+..+.+++++
T Consensus       176 ~~~sDv~slG~il~~l~tg  194 (274)
T cd06609         176 DEKADIWSLGITAIELAKG  194 (274)
T ss_pred             CchhhHHHHHHHHHHHHhC
Confidence            4567888888888888776

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.40  E-value=1.7e-12  Score=131.62  Aligned_cols=187  Identities=20%  Similarity=0.128  Sum_probs=112.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+...+       |+.||||+..+....                                      
T Consensus        23 ~~~lg~g~~~~vy~~~~~~~-------~~~~~ik~~~~~~~~--------------------------------------   57 (286)
T cd06638          23 IETIGKGTYGKVFKVLNKKN-------GSKAAVKILDPIHDI--------------------------------------   57 (286)
T ss_pred             eeeeccCCCcEEEEEEECCC-------CceeEEEeeccccch--------------------------------------
Confidence            47899999999999999764       689999986542100                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-------CCCCcEEEEeccCCccHHHHHHhhhc-chhh----HHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-------LVHPAVLVETYEQGECVSRYVDELQG-HERL----KSAL  436 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-------l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~----~~~l  436 (581)
                        +-++.+|...+.++.    +++++  ++.+..       -....++||||++|.+|.+++..... ....    ...+
T Consensus        58 --~~~~~~e~~~l~~l~----~h~~i--~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  129 (286)
T cd06638          58 --DEEIEAEYNILKALS----DHPNV--VKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYI  129 (286)
T ss_pred             --HHHHHHHHHHHHHHh----cCCCe--eeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHH
Confidence              001223333333332    12222  222211       11235899999999999998753211 1111    1223


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +..++.+ +..+|..|++|+|++|+||++.       .++      .++|+|||++..+.......-     .......+
T Consensus       130 ~~~i~~~-l~~lH~~~i~H~dlkp~nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~-----~~~~~~~y  190 (286)
T cd06638         130 LHEALMG-LQHLHVNKTIHRDVKGNNILLT-------TEG------GVKLVDFGVSAQLTSTRLRRN-----TSVGTPFW  190 (286)
T ss_pred             HHHHHHH-HHHHHhCCccccCCCHHhEEEC-------CCC------CEEEccCCceeecccCCCccc-----cccCCCcc
Confidence            3333333 6789999999999999999998       666      799999999877654321100     00111224


Q ss_pred             HHHHHHHh----hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLR----LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~----l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++|.+..    ........|.++|+..+.++.++
T Consensus       191 ~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g  225 (286)
T cd06638         191 MAPEVIACEQQLDSTYDARCDVWSLGITAIELGDG  225 (286)
T ss_pred             cChhhhchhhhccccccchhhhhhHHHHHHHHhcC
Confidence            45554421    12233456888888888887765

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.40  E-value=3e-12  Score=127.17  Aligned_cols=184  Identities=20%  Similarity=0.124  Sum_probs=117.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       ++.|++|.......                                       
T Consensus         8 ~~~i~~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~---------------------------------------   41 (256)
T cd06612           8 LEKLGEGSYGSVYKAIHKET-------GQVVAIKVVPVEED---------------------------------------   41 (256)
T ss_pred             hhhhcCCCCeEEEEEEEcCC-------CcEEEEEEeecHHH---------------------------------------
Confidence            46799999999999999764       68999998543210                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        .-++.+|.+.+.++     +++++  ++.+..  .....+++|||++|.+|.+++.....  .......++..++.+ 
T Consensus        42 --~~~~~~e~~~~~~l-----~~~~i--~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~-  111 (256)
T cd06612          42 --LQEIIKEISILKQC-----DSPYI--VKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKG-  111 (256)
T ss_pred             --HHHHHHHHHHHHhC-----CCCcE--eeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHH-
Confidence              01233444444433     22222  222211  22345799999999999998854221  112223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|+||+++       .++      .++|.|||++..+.........     ......+.+.|.+..
T Consensus       112 l~~lh~~~i~H~dl~~~ni~~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~-----~~~~~~y~~PE~~~~  173 (256)
T cd06612         112 LEYLHSNKKIHRDIKAGNILLN-------EEG------QAKLADFGVSGQLTDTMAKRNT-----VIGTPFWMAPEVIQE  173 (256)
T ss_pred             HHHHHHCCcccCCCCcceEEEC-------CCC------cEEEcccccchhcccCcccccc-----ccCCccccCHHHHhc
Confidence            6788999999999999999998       667      8999999998877654321100     111223445555432


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .......|.++|+..+.+++.+
T Consensus       174 -~~~~~~~Di~s~G~il~~l~~g  195 (256)
T cd06612         174 -IGYNNKADIWSLGITAIEMAEG  195 (256)
T ss_pred             -CCCCchhhHHHHHHHHHHHHhC
Confidence             3344457899999888888765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.40  E-value=2.1e-12  Score=130.32  Aligned_cols=195  Identities=17%  Similarity=0.148  Sum_probs=117.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+..+.  .+...++.||||+........                                     
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~--~~~~~~~~vaiK~~~~~~~~~-------------------------------------   50 (280)
T cd05049          10 KRELGEGAFGKVFLGECYHL--EPENDKELVAVKTLKETASND-------------------------------------   50 (280)
T ss_pred             HhhccccCCceEeeeeeccc--cCcCCcceEEEEeecccCCHH-------------------------------------
Confidence            46799999999999998642  111225899999865331110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc---------------hhhH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---------------ERLK  433 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---------------~~~~  433 (581)
                       .+-++.+|++.+.++.     ++++.-..-+.......++||||++|.+|.+++......               ....
T Consensus        51 -~~~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~  124 (280)
T cd05049          51 -ARKDFEREAELLTNFQ-----HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQL  124 (280)
T ss_pred             -HHHHHHHHHHHHHhcC-----CCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHH
Confidence             0123455665555442     222211111122234568999999999999998643210               0011


Q ss_pred             HHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh
Q 008021          434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR  513 (581)
Q Consensus       434 ~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~  513 (581)
                      ..++..++.+ +..+|..|++|+|++|+||+++       .++      .++|+|||++..+..........   .....
T Consensus       125 ~~~~~~i~~~-l~~lH~~~i~h~dlkp~nili~-------~~~------~~kl~d~g~~~~~~~~~~~~~~~---~~~~~  187 (280)
T cd05049         125 LQIAVQIASG-MVYLASQHFVHRDLATRNCLVG-------YDL------VVKIGDFGMSRDVYTTDYYRVGG---HTMLP  187 (280)
T ss_pred             HHHHHHHHHH-HHHHhhCCeeccccccceEEEc-------CCC------eEEECCcccceecccCcceecCC---CCccc
Confidence            2233333333 6788999999999999999998       667      89999999987653221100000   00001


Q ss_pred             cHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          514 DGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       514 D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..+.++|.+. -+......|.|+|+..+.+++.
T Consensus       188 ~~y~aPE~~~-~~~~~~~~Di~slG~il~e~~~  219 (280)
T cd05049         188 IRWMPPESIM-YRKFTTESDVWSFGVVLWEIFT  219 (280)
T ss_pred             ceecChhhhc-cCCcchhhhHHHHHHHHHHHHh
Confidence            1245556543 3444556799999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.40  E-value=2.1e-12  Score=129.56  Aligned_cols=184  Identities=17%  Similarity=0.169  Sum_probs=110.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|.+..        +..||+|+.+++-..                                      
T Consensus        11 ~~~ig~g~~~~v~~~~~~~--------~~~~~lK~~~~~~~~--------------------------------------   44 (260)
T cd05069          11 DVKLGQGCFGEVWMGTWNG--------TTKVAIKTLKPGTMM--------------------------------------   44 (260)
T ss_pred             eeeecCcCCCeEEEEEEcC--------CceEEEEEcccCCcc--------------------------------------
Confidence            4679999999999999864        357999987664110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~  444 (581)
                        +-++.+|.+.+.++.     ++++ .+...+  .....+++|||++|.+|.+++......   ......++..++.+ 
T Consensus        45 --~~~~~~E~~~l~~l~-----h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a-  114 (260)
T cd05069          45 --PEAFLQEAQIMKKLR-----HDKLVPLYAVV--SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADG-  114 (260)
T ss_pred             --HHHHHHHHHHHHhCC-----CCCeeeEEEEE--cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHH-
Confidence              012333444443331     2221 111111  123468999999999999988642211   11123344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|+||+++       +++      .++|+|||++..+............    ..-.+.+.|.+. 
T Consensus       115 l~~lH~~~i~H~dl~~~Nill~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~~~----~~~~y~~Pe~~~-  176 (260)
T cd05069         115 MAYIERMNYIHRDLRAANILVG-------DNL------VCKIADFGLARLIEDNEYTARQGAK----FPIKWTAPEAAL-  176 (260)
T ss_pred             HHHHHhCCEeecccCcceEEEc-------CCC------eEEECCCccceEccCCcccccCCCc----cchhhCCHHHhc-
Confidence            6788999999999999999998       666      8999999998766432211100000    001133344332 


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      -+......|.++|+..+.++++
T Consensus       177 ~~~~~~~~Di~slG~~l~el~t  198 (260)
T cd05069         177 YGRFTIKSDVWSFGILLTELVT  198 (260)
T ss_pred             cCCcChHHHHHHHHHHHHHHHh
Confidence            2333344577777777777775

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.40  E-value=2e-12  Score=131.93  Aligned_cols=193  Identities=19%  Similarity=0.157  Sum_probs=111.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.++...|  ..+..||||+......                                      .
T Consensus        11 ~~~lg~G~~g~Vy~~~~~~~~~~--~~~~~vavK~~~~~~~--------------------------------------~   50 (288)
T cd05061          11 LRELGQGSFGMVYEGNARDIIKG--EAETRVAVKTVNESAS--------------------------------------L   50 (288)
T ss_pred             eeeecCCCCcEEEEEEEeccCCC--CcceEEEEEECCCcCC--------------------------------------H
Confidence            47899999999999987642111  1246899997543211                                      0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc-----------hhhHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH-----------ERLKSA  435 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------~~~~~~  435 (581)
                      ..+.++.+|...+.++.     ++++  ++.+.  ......++||||++|++|.+++......           ......
T Consensus        51 ~~~~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  123 (288)
T cd05061          51 RERIEFLNEASVMKGFT-----CHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ  123 (288)
T ss_pred             HHHHHHHHHHHHHHhCC-----CCCe--eeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHH
Confidence            01123444544444331     2222  22221  2234568999999999999998642210           011122


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      ++..++.+ +..+|..|++|+|+||.||+++       .++      .++|+|||++..+.......-.  ... ...-.
T Consensus       124 ~~~~l~~~-l~~lH~~~i~H~dikp~nili~-------~~~------~~~L~Dfg~~~~~~~~~~~~~~--~~~-~~~~~  186 (288)
T cd05061         124 MAAEIADG-MAYLNAKKFVHRDLAARNCMVA-------HDF------TVKIGDFGMTRDIYETDYYRKG--GKG-LLPVR  186 (288)
T ss_pred             HHHHHHHH-HHHHHhCCCcCCCCChheEEEc-------CCC------cEEECcCCcccccccccccccc--CCC-ccccc
Confidence            33344443 6789999999999999999998       666      8999999998765332110000  000 00011


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +.+.|.+.. +......|.++|+..+.++..
T Consensus       187 y~~pE~~~~-~~~~~~~DvwslG~~l~el~~  216 (288)
T cd05061         187 WMAPESLKD-GVFTTSSDMWSFGVVLWEITS  216 (288)
T ss_pred             ccCHHHhcc-CCCChHhHHHHHHHHHHHHHh
Confidence            334444322 333445678888887777764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.40  E-value=9.1e-13  Score=133.24  Aligned_cols=189  Identities=17%  Similarity=0.099  Sum_probs=113.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+...+       |+.||||+........                               ..    
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~vK~~~~~~~~~-------------------------------~~----   42 (286)
T cd07832           5 LGRIGEGAHGIVFKAKDRET-------GETVALKKVALRRLEG-------------------------------GI----   42 (286)
T ss_pred             EeecccCCCcEEEEEEECCC-------CceEEEEEEEcccccc-------------------------------hh----
Confidence            36799999999999998764       6999999876431100                               00    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        +-++.+|...+.++.     +++  +++.+.  ......++||||+ |.+|.+++.....  .......++..++.+ 
T Consensus        43 --~~~~~~e~~~l~~~~-----~~~--i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~-  111 (286)
T cd07832          43 --PNQALREIKALQACQ-----HPY--VVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKG-  111 (286)
T ss_pred             --hHHHHHHHHHHHhCC-----CCC--CcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-
Confidence              012233443333321     222  222221  1234457999999 9999998754221  111223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||.||+++       .++      .++|+|||++..+.......+..    ......+.++|.+..
T Consensus       112 l~~lH~~~i~H~dl~p~ni~~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~  174 (286)
T cd07832         112 VAYMHANGIMHRDLKPANLLIS-------ADG------VLKIADFGLARLFSEEEPRLYSH----QVATRWYRAPELLYG  174 (286)
T ss_pred             HHHHHHCCeecCCcCHHHEEEc-------CCC------cEEEeeeeecccccCCCCCcccc----ccCcccccCceeeec
Confidence            7788999999999999999998       566      89999999988775543211110    011112344444322


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      -.......|.+.++..+.+++.+
T Consensus       175 ~~~~~~~~Di~slG~~l~~l~tg  197 (286)
T cd07832         175 ARKYDPGVDLWAVGCIFAELLNG  197 (286)
T ss_pred             cccCCchhHHHHHHHHHHHHHcC
Confidence            22223456888888888887765

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.40  E-value=1.3e-12  Score=131.81  Aligned_cols=191  Identities=16%  Similarity=0.132  Sum_probs=115.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+.+......                               ++    
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~-------~~~~~~K~~~~~~~~~-------------------------------~~----   41 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKT-------GELVALKKIRMENEKE-------------------------------GF----   41 (287)
T ss_pred             eEEeccCCCeEEEEEEECCC-------CeEEEEEEEecccccc-------------------------------cc----
Confidence            36789999999999999764       6999999977652100                               00    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-cccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        ..++.+|...+.++.     ++++. +...+..- ....++||||+++ ++.+++.....  .......++..++++ 
T Consensus        42 --~~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~a-  112 (287)
T cd07840          42 --PITAIREIKLLQKLR-----HPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEG-  112 (287)
T ss_pred             --hHHHHHHHHHHHhcc-----CCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHH-
Confidence              012233444443332     12211 11111111 2456899999987 78877644211  111122344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|+||+++       ++|      .++|+|||++..+..........    ....-.+.++|.+..
T Consensus       113 l~~LH~~~~~h~dl~p~nil~~-------~~~------~~~l~d~g~~~~~~~~~~~~~~~----~~~~~~y~~PE~~~~  175 (287)
T cd07840         113 LQYLHSNGILHRDIKGSNILIN-------NDG------VLKLADFGLARPYTKRNSADYTN----RVITLWYRPPELLLG  175 (287)
T ss_pred             HHHHHHCCceeccCcHHHeEEc-------CCC------CEEEccccceeeccCCCcccccc----cccccccCCceeeEc
Confidence            6789999999999999999999       677      89999999998775543211110    001112344454433


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ........|.++|+..+.+++.+
T Consensus       176 ~~~~~~~~Dv~slG~~l~el~t~  198 (287)
T cd07840         176 ATRYGPEVDMWSVGCILAELFLG  198 (287)
T ss_pred             cccCChHHHHHHHHHHHHHHHhC
Confidence            23334456889998888888876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.40  E-value=2.9e-12  Score=127.91  Aligned_cols=188  Identities=16%  Similarity=0.079  Sum_probs=113.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||.|++|.||+|+...+       |+.||+|+.........                          .         
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~~--------------------------~---------   42 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDT-------KKMFAMKYMNKQKCVEK--------------------------G---------   42 (258)
T ss_pred             EEEeccCCCceEEEEEEccC-------CcEEEEEEEehhhhcch--------------------------h---------
Confidence            57899999999999998764       68999998654210000                          0         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhh-hcchhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~-~~~~~~~~~la~~~i~a~l  445 (581)
                       ..-++.+|.+.+.++.     +++  +++.+..  -....++||||++|.+|.+++... .........++..++++ +
T Consensus        43 -~~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~-l  113 (258)
T cd05578          43 -SVRNVLNERRILQELN-----HPF--LVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLA-L  113 (258)
T ss_pred             -HHHHHHHHHHHHHhCC-----CCC--hHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHH-H
Confidence             0011223333332221     111  1122111  123457999999999999988653 11111222333334433 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .++      .++|+|||.+..........      .......+.+.|.+.. 
T Consensus       114 ~~lh~~~i~h~dl~~~nil~~-------~~~------~~~l~d~~~~~~~~~~~~~~------~~~~~~~y~~PE~~~~-  173 (258)
T cd05578         114 EYLHSKGIIHRDIKPDNILLD-------EQG------HVHITDFNIATKVTPDTLTT------STSGTPGYMAPEVLCR-  173 (258)
T ss_pred             HHHHhCCeeccCCCHHHeEEc-------CCC------CEEEeecccccccCCCcccc------ccCCChhhcCHHHHcc-
Confidence            789999999999999999998       666      89999999988765542111      0011112334444433 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       174 ~~~~~~~Di~slG~~l~~l~~g  195 (258)
T cd05578         174 QGYSVAVDWWSLGVTAYECLRG  195 (258)
T ss_pred             cCCCCcccchhhHHHHHHHHhC
Confidence            2234456888888888888766

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.40  E-value=2.5e-12  Score=129.15  Aligned_cols=191  Identities=20%  Similarity=0.252  Sum_probs=111.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+  +  .+...||||+.+++.....                                    
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~--~--~~~~~vaik~~~~~~~~~~------------------------------------   48 (266)
T cd05033           9 EKVIGGGEFGEVCRGRLKLP--G--KKEIDVAIKTLKAGSSDKQ------------------------------------   48 (266)
T ss_pred             eeEecCCccceEEEEEEccC--C--CCcceEEEEEcCCCCChHH------------------------------------
Confidence            57899999999999998642  1  1146899998766522111                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                        +-+|..|...+.++.     +++  +.+.+.  ......+++|||++|.+|.+++....+.  ......++..++.+ 
T Consensus        49 --~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~-  118 (266)
T cd05033          49 --RLDFLTEASIMGQFD-----HPN--IIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASG-  118 (266)
T ss_pred             --HHHHHHHHHHHHhCC-----CCC--cceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHH-
Confidence              112334444444331     122  222221  1223458999999999999998643221  11112333333333 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       .++      .++|+|||++..+...........   ....-.+.+.|.+. 
T Consensus       119 l~~Lh~~~i~H~di~p~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~~---~~~~~~y~~Pe~~~-  181 (266)
T cd05033         119 MKYLSEMNYVHRDLAARNILVN-------SNL------VCKVSDFGLSRRLEDSEATYTTKG---GKIPIRWTAPEAIA-  181 (266)
T ss_pred             HHHHHhCCcccCCCCcceEEEc-------CCC------CEEECccchhhcccccccceeccC---CCCCccccChhhhc-
Confidence            6789999999999999999998       666      899999999887742111100000   00000123333332 


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      -.......|.++|+..+.+++.
T Consensus       182 ~~~~~~~~Dv~slG~~l~~l~~  203 (266)
T cd05033         182 YRKFTSASDVWSFGIVMWEVMS  203 (266)
T ss_pred             cCCCccccchHHHHHHHHHHHc
Confidence            2233345677777777777654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.40  E-value=2.6e-12  Score=132.44  Aligned_cols=190  Identities=17%  Similarity=0.110  Sum_probs=116.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+       |+.||+|+.+......                        .            
T Consensus        12 ~~~ig~g~~~~v~~~~~~~~-------~~~vaiK~~~~~~~~~------------------------~------------   48 (309)
T cd07845          12 LNRIGEGTYGIVYRARDTTS-------GEIVALKKVRMDNERD------------------------G------------   48 (309)
T ss_pred             eeeeeecCCEEEEEEEECCC-------CcEEEEEEEEeccCCC------------------------C------------
Confidence            46799999999999999865       7999999876431110                        0            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCC-cccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~-V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                       .+..+.+|...+.++.     +++ +.+...+..- ....++||||++| ++.+++.....  .......++..++.+ 
T Consensus        49 -~~~~~~~E~~~l~~l~-----h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~-  120 (309)
T cd07845          49 -IPISSLREITLLLNLR-----HPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRG-  120 (309)
T ss_pred             -CcchhhHHHHHHHhCC-----CCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHH-
Confidence             0011122433333321     122 1121222111 1235899999987 67777654221  111223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|+||+++       .++      .++|+|||++..+.......     ........+.++|.+..
T Consensus       121 l~~lH~~~i~H~dl~p~nil~~-------~~~------~~kL~dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~  182 (309)
T cd07845         121 LQYLHENFIIHRDLKVSNLLLT-------DKG------CLKIADFGLARTYGLPAKPM-----TPKVVTLWYRAPELLLG  182 (309)
T ss_pred             HHHHHhCCeecCCCCHHHEEEC-------CCC------CEEECccceeeecCCccCCC-----CcccccccccChhhhcC
Confidence            7889999999999999999998       666      89999999988765432100     00001123456666554


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ........|.++++..+.+++.+
T Consensus       183 ~~~~~~~~DvwslG~il~el~~g  205 (309)
T cd07845         183 CTTYTTAIDMWAVGCILAELLAH  205 (309)
T ss_pred             CCCcCchHHHHHHHHHHHHHHhC
Confidence            33344567999999999998876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.40  E-value=2.1e-12  Score=129.76  Aligned_cols=187  Identities=19%  Similarity=0.148  Sum_probs=113.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|..+++       ++.||+|+...+...                              .       
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~-------~~~~~~K~~~~~~~~------------------------------~-------   46 (263)
T cd05052          11 KHKLGGGQYGEVYEGVWKKY-------SLTVAVKTLKEDTME------------------------------V-------   46 (263)
T ss_pred             eeecCCcccceEEEEEEecC-------CceEEEEEecCCchH------------------------------H-------
Confidence            57899999999999999764       689999986543110                              0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l  445 (581)
                         -++.+|.+.+.++.     ++++.-..-+.......+++|||++|.+|.+++......   ......++..++++ +
T Consensus        47 ---~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~-l  117 (263)
T cd05052          47 ---EEFLKEAAVMKEIK-----HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-M  117 (263)
T ss_pred             ---HHHHHHHHHHHhCC-----CCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH-H
Confidence               01233333333221     111110000111233457999999999999988542211   11122344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||++.       .++      .++|+|||++..+............    ....+.+.|.+.. 
T Consensus       118 ~~lH~~~i~H~dlkp~nil~~-------~~~------~~kl~df~~~~~~~~~~~~~~~~~~----~~~~y~aPE~~~~-  179 (263)
T cd05052         118 EYLEKKNFIHRDLAARNCLVG-------ENH------LVKVADFGLSRLMTGDTYTAHAGAK----FPIKWTAPESLAY-  179 (263)
T ss_pred             HHHHhCCEeecccCcceEEEc-------CCC------cEEeCCCccccccccceeeccCCCC----CccccCCHHHhcc-
Confidence            789999999999999999998       666      8999999998876543211100000    0012444554422 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.++|+..+.++++
T Consensus       180 ~~~~~~~Dv~slG~il~el~t  200 (263)
T cd05052         180 NKFSIKSDVWAFGVLLWEIAT  200 (263)
T ss_pred             CCCCchhHHHHHHHHHHHHHc
Confidence            233345688888888888876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.40  E-value=1.1e-12  Score=133.33  Aligned_cols=192  Identities=14%  Similarity=0.116  Sum_probs=115.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+  | ...++.|+||...+....                            +         
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~--~-~~~~~~~~ik~~~~~~~~----------------------------~---------   49 (283)
T cd05090          10 MEELGECAFGKIYKGHLYLP--G-MDHAQLVAIKTLKDINNP----------------------------Q---------   49 (283)
T ss_pred             eeeccccCCcceEEEEEecC--C-CCCcceEEEEeccCCCCH----------------------------H---------
Confidence            47899999999999996432  1 012589999986543110                            0         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc------------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG------------------  428 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~------------------  428 (581)
                       ..-++.+|...+.++.     +++  +++.+..  .....++||||++|.+|.+++.....                  
T Consensus        50 -~~~~~~~E~~~l~~l~-----h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  121 (283)
T cd05090          50 -QWGEFQQEASLMAELH-----HPN--IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSL  121 (283)
T ss_pred             -HHHHHHHHHHHHhhCC-----CCC--eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCcccccccccccccccc
Confidence             0112344554444332     222  2223221  23456899999999999998742110                  


Q ss_pred             chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHH
Q 008021          429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK  508 (581)
Q Consensus       429 ~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~  508 (581)
                      .......++..++.+ +..+|..|++|+|++|.|||++       .++      .++|.|||++..+.........   .
T Consensus       122 ~~~~~~~i~~~i~~a-l~~lH~~~i~H~dlkp~nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~~---~  184 (283)
T cd05090         122 DHGDFLHIAIQIAAG-MEYLSSHFFVHKDLAARNILIG-------EQL------HVKISDLGLSREIYSADYYRVQ---P  184 (283)
T ss_pred             CHHHHHHHHHHHHHH-HHHHHhcCeehhccccceEEEc-------CCC------cEEeccccccccccCCcceecc---c
Confidence            001112234444443 7889999999999999999998       566      8999999999876433211100   0


Q ss_pred             HHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       509 Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .....-.+.+.|.+.. +......|.++|+..+.++++
T Consensus       185 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~  221 (283)
T cd05090         185 KSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFS  221 (283)
T ss_pred             CCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHc
Confidence            0000112445554432 344556799999999999886

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.40  E-value=2e-12  Score=129.85  Aligned_cols=185  Identities=21%  Similarity=0.219  Sum_probs=112.4

Q ss_pred             ecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHH
Q 008021          292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ  371 (581)
Q Consensus       292 IgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~E  371 (581)
                      ||+|++|.||+|+++.. +    .+..||||+..+.......                                      
T Consensus         3 ig~G~~g~v~~~~~~~~-~----~~~~vavk~~~~~~~~~~~--------------------------------------   39 (257)
T cd05115           3 LGSGNFGCVKKGVYKMR-K----KQIDVAIKVLKNENEKSVR--------------------------------------   39 (257)
T ss_pred             cCCCCcccEEEEEEecC-C----CceeEEEEEcccccChHHH--------------------------------------
Confidence            89999999999987632 1    1578999987654211100                                      


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHh
Q 008021          372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKML  448 (581)
Q Consensus       372 lDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L  448 (581)
                      -+|.+|+.-+.++.     ++++  .+.+.. .....++||||++|.+|.+++.....  .......++..++.+ +..+
T Consensus        40 ~~~~~E~~~l~~l~-----h~~i--i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~-l~~l  111 (257)
T cd05115          40 DEMMREAEIMHQLD-----NPYI--VRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMG-MKYL  111 (257)
T ss_pred             HHHHHHHHHHHhcC-----CCCe--EEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH-HHHH
Confidence            12334544444331     1221  111111 12345899999999999998854221  112223344444444 6778


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh---cHHHHHHHHHhh
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR---DGRTAAECTLRL  525 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~---D~~~~~e~ll~l  525 (581)
                      |..|++|+|+||+||+++       .++      .++|+|||++..+.........     ....   -.+.++|.+. .
T Consensus       112 H~~~i~H~dlkp~nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~-~  172 (257)
T cd05115         112 EGKNFVHRDLAARNVLLV-------NQH------YAKISDFGLSKALGADDSYYKA-----RSAGKWPLKWYAPECIN-F  172 (257)
T ss_pred             HhcCeeecccchheEEEc-------CCC------cEEeccCCccccccCCccceec-----cCCCCCCcccCCHHHHc-c
Confidence            999999999999999998       566      8999999998765433221100     0000   1234455443 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.++|+..+.+++.
T Consensus       173 ~~~~~~~Di~slG~~l~el~~  193 (257)
T cd05115         173 RKFSSRSDVWSYGITMWEAFS  193 (257)
T ss_pred             CCCCchhhHHHHHHHHHHHhc
Confidence            344456788999888888774

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.40  E-value=1.5e-12  Score=131.94  Aligned_cols=187  Identities=16%  Similarity=0.089  Sum_probs=113.3

Q ss_pred             ecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHH
Q 008021          292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ  371 (581)
Q Consensus       292 IgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~E  371 (581)
                      ||+|++|.||+|....+       |+.||||+.+......                                    ...+
T Consensus         1 lg~g~~g~vy~~~~~~~-------~~~~~ik~~~~~~~~~------------------------------------~~~~   37 (277)
T cd05577           1 LGKGGFGEVCACQVKAT-------GKMYACKKLDKKRLKK------------------------------------RKGE   37 (277)
T ss_pred             CCCCCceeEEEEEEcCC-------CcEEEEEEEehhhhhh------------------------------------hhhh
Confidence            68999999999998764       6999999865431000                                    0011


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHh
Q 008021          372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKML  448 (581)
Q Consensus       372 lDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l~~L  448 (581)
                      ..+.+|...+.++.     ++.+.-...+.......++||||++|.+|.+++......   ......++..++.+ +..+
T Consensus        38 ~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~-l~~l  111 (277)
T cd05577          38 QMALNEKKILEKVS-----SRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICG-LEHL  111 (277)
T ss_pred             HHHHHHHHHHHhCC-----CCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHH-HHHH
Confidence            22334555554432     222211111112234568999999999999988543211   11112233344443 6789


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|++|.||+++       .++      .++|+|||.+..+.......      .......+.++|.+.. ...
T Consensus       112 H~~~i~H~di~p~Nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~------~~~~~~~y~~PE~~~~-~~~  171 (277)
T cd05577         112 HQRRIVYRDLKPENVLLD-------DHG------NVRISDLGLAVELKGGKKIK------GRAGTPGYMAPEVLQG-EVY  171 (277)
T ss_pred             HhCCcccCCCCHHHEEEC-------CCC------CEEEccCcchhhhccCCccc------cccCCCCcCCHHHhcC-CCC
Confidence            999999999999999998       666      89999999887654321110      0011223445555432 223


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.+.|+..+.+++.+
T Consensus       172 ~~~~Di~slG~il~~l~~g  190 (277)
T cd05577         172 DFSVDWFALGCTLYEMIAG  190 (277)
T ss_pred             CchhhhHHHHHHHHHHhhC
Confidence            4456888888888887765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.40  E-value=2.9e-12  Score=128.27  Aligned_cols=198  Identities=15%  Similarity=0.083  Sum_probs=118.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|....+       |+.||+|+.++....... +                          .      
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~-------~~~~alk~~~~~~~~~~~-~--------------------------~------   44 (268)
T cd06630           5 GQQLGTGAFSSCYQARDVKT-------GTLMAVKQVTYVRNTSSE-Q--------------------------E------   44 (268)
T ss_pred             cceecCcCceEEEEEEEcCC-------CcEEEEEEeecccCCchh-H--------------------------H------
Confidence            46799999999999998764       699999987643211000 0                          0      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                      ...-++.+|++.+.++.     ++++  ++.+..  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        45 ~~~~~~~~e~~~l~~l~-----h~~i--v~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~a-l  116 (268)
T cd06630          45 EVVEALRKEIRLMARLN-----HPHI--IRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRG-L  116 (268)
T ss_pred             HHHHHHHHHHHHHHHcC-----CCce--ehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHH-H
Confidence            00122344555554432     1222  222221  12344799999999999998864321 112223344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|+||+++       .++     ..++|+|||.+..+....... ...-........+.+.|.+.. 
T Consensus       117 ~~LH~~~i~H~~i~~~nil~~-------~~~-----~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~-  182 (268)
T cd06630         117 SYLHENQIIHRDVKGANLLID-------STG-----QRLRIADFGAAARLAAKGTGA-GEFQGQLLGTIAFMAPEVLRG-  182 (268)
T ss_pred             HHHHhCCeecCCCCHHHEEEc-------CCC-----CEEEEcccccccccccccccC-CccccccccccceeCHhHhcc-
Confidence            889999999999999999997       333     169999999988775431110 000000011123344554422 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .......|.+.++..+.+++.+.
T Consensus       183 ~~~~~~~Dv~slG~~l~~l~~g~  205 (268)
T cd06630         183 EQYGRSCDVWSVGCVIIEMATAK  205 (268)
T ss_pred             CCCCcccchHHHHHHHHHHHhCC
Confidence            23345679999999999888764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.40  E-value=4e-12  Score=131.14  Aligned_cols=189  Identities=15%  Similarity=0.109  Sum_probs=109.2

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCe--EEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPI--VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~--~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      +|+ .+.||.|++|+||+|..+.+       |.  .|++|.......+.                               
T Consensus         8 ~~~~~~~lg~G~~g~V~~a~~~~~-------~~~~~~~ik~~~~~~~~~-------------------------------   49 (303)
T cd05088           8 DIKFQDVIGEGNFGQVLKARIKKD-------GLRMDAAIKRMKEYASKD-------------------------------   49 (303)
T ss_pred             hceeeeeecCCCCceEEEEEEccC-------CceeeEEEEEecccCCHH-------------------------------
Confidence            344 57899999999999998764       44  45666543321100                               


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc------------
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG------------  428 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~------------  428 (581)
                             ..-++.+|...+.++.    ++++  +++.+  .......++||||++|.+|.+++.....            
T Consensus        50 -------~~~~~~~Ei~~l~~l~----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  116 (303)
T cd05088          50 -------DHRDFAGELEVLCKLG----HHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS  116 (303)
T ss_pred             -------HHHHHHHHHHHHHHhc----CCCC--cceEEEEECCCCCceEEEEeCCCCcHHHHHHhccccccccccccccc
Confidence                   0112333444444331    2222  22322  2233456899999999999998864211            


Q ss_pred             -----chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHH
Q 008021          429 -----HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNL  503 (581)
Q Consensus       429 -----~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l  503 (581)
                           .......++..++++ +..+|..|++|+|++|.|||++       .++      .++|+|||++...........
T Consensus       117 ~~~~l~~~~~~~~~~qi~~a-l~~LH~~gi~H~dlkp~Nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~  182 (303)
T cd05088         117 TASTLSSQQLLHFAADVARG-MDYLSQKQFIHRDLAARNILVG-------ENY------VAKIADFGLSRGQEVYVKKTM  182 (303)
T ss_pred             ccCcCCHHHHHHHHHHHHHH-HHHHHhCCccccccchheEEec-------CCC------cEEeCccccCcccchhhhccc
Confidence                 011112233344443 7889999999999999999998       666      899999999864321111100


Q ss_pred             HHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          504 VEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       504 ~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..      ..-.+.+.|.+.. .......|.++|+..+.++++
T Consensus       183 ~~------~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt  218 (303)
T cd05088         183 GR------LPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVS  218 (303)
T ss_pred             CC------CcccccCHHHHhc-cCCcccccchhhhhHHHHHHh
Confidence            00      0001334443322 233445678888877777764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.40  E-value=1.7e-12  Score=131.99  Aligned_cols=194  Identities=17%  Similarity=0.183  Sum_probs=115.1

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|+....  + ...++.||||..++......                                     
T Consensus        10 ~~lg~g~~g~v~~~~~~~~--~-~~~~~~va~K~~~~~~~~~~-------------------------------------   49 (284)
T cd05079          10 RDLGEGHFGKVELCRYDPE--G-DNTGEQVAVKSLKPESGGNH-------------------------------------   49 (284)
T ss_pred             eecCCCCceeEEEEEEccC--C-CCccceEEEEEcCccccHHH-------------------------------------
Confidence            5699999999999986421  0 11268999998776522110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCc-ccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                       .-++.+|...+.++.     ++++ .+.....+. ....++||||++|.+|.+++.....  .......++..++.+ +
T Consensus        50 -~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~a-L  122 (284)
T cd05079          50 -IADLKKEIEILRNLY-----HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKG-M  122 (284)
T ss_pred             -HHHHHHHHHHHHhCC-----CCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHH-H
Confidence             012334444444331     1221 111111111 1234799999999999998854221  111223344444443 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||.||+++       .++      .++|.|||++..+.......  ...........+.+.|.+.. 
T Consensus       123 ~~lH~~gi~H~dlkp~Nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~-  186 (284)
T cd05079         123 DYLGSRQYVHRDLAARNVLVE-------SEH------QVKIGDFGLTKAIETDKEYY--TVKDDLDSPVFWYAPECLIQ-  186 (284)
T ss_pred             HHHHHCCeeecccchheEEEc-------CCC------CEEECCCccccccccCccce--eecCCCCCCccccCHHHhcc-
Confidence            889999999999999999998       666      89999999988765432110  00000011112455565533 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +......|.++|+..+.+++.
T Consensus       187 ~~~~~~~Di~slG~il~ellt  207 (284)
T cd05079         187 SKFYIASDVWSFGVTLYELLT  207 (284)
T ss_pred             CCCCccccchhhhhhhhhhhc
Confidence            334456799999999988875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.40  E-value=2.1e-12  Score=131.48  Aligned_cols=189  Identities=15%  Similarity=0.078  Sum_probs=111.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||+|++|.||+|+...+       |+.||||+.+......                        .            
T Consensus         6 ~~~lg~g~~g~vy~~~~~~~-------~~~v~lK~~~~~~~~~------------------------~------------   42 (295)
T cd07837           6 LEKIGEGTYGKVYKARDKNT-------GKLVALKKTRLEMDEE------------------------G------------   42 (295)
T ss_pred             eeEecccCCeEEEEEEECCC-------CcEEEEEeehhhcccc------------------------C------------
Confidence            46799999999999999764       6999999865431110                        0            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CC-----CcEEEEeccCCccHHHHHHhhhc------chhhHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VH-----PAVLVETYEQGECVSRYVDELQG------HERLKSA  435 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t-----~~VLVmEyi~G~~L~~~l~~~~~------~~~~~~~  435 (581)
                       ...++.+|...+.++.    .++++  ++.+...  ..     ..++||||++| ++.+++.....      .......
T Consensus        43 -~~~~~~~E~~~l~~l~----~~~~i--~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~  114 (295)
T cd07837          43 -IPPTALREISLLQMLS----ESIYI--VRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKS  114 (295)
T ss_pred             -CchHHHHHHHHHHHcc----CCCCc--cceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHH
Confidence             0011223433333332    11111  1111110  01     13799999998 68777654221      1112223


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeeccccccc-ccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ-KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~-~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      ++..++++ +..||..|++|+|++|+||+++       . ++      .++|.|||++..+..........     ...-
T Consensus       115 ~~~qi~~~-L~~LH~~~i~H~dl~~~nil~~-------~~~~------~~kl~dfg~~~~~~~~~~~~~~~-----~~~~  175 (295)
T cd07837         115 FMYQLLKG-VAHCHKHGVMHRDLKPQNLLVD-------KQKG------LLKIADLGLGRAFSIPVKSYTHE-----IVTL  175 (295)
T ss_pred             HHHHHHHH-HHHHHHCCeeecCCChHHEEEe-------cCCC------eEEEeecccceecCCCccccCCc-----cccc
Confidence            44444444 7889999999999999999998       4 55      89999999987654321110000     0112


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.++|.+..........|.++|+..+.+++.+
T Consensus       176 ~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g  208 (295)
T cd07837         176 WYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRK  208 (295)
T ss_pred             CCCChHHhhCCCCCCchHHHHHHHHHHHHHHcC
Confidence            244556554333334567888888888887766

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=2.9e-12  Score=126.64  Aligned_cols=189  Identities=16%  Similarity=0.145  Sum_probs=117.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|+||+|+...+       |++|+||........                           ++..       
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~---------------------------~~~~-------   43 (254)
T cd06627           5 GDLIGRGAFGVVYKGLNLET-------GDFVAIKQISLEKIK---------------------------EEAL-------   43 (254)
T ss_pred             eeEEcccCCeEEEEEEEcCC-------CcEEEEEEecccccC---------------------------HHHH-------
Confidence            57899999999999998764       689999987654110                           0000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -++.+|.+.+.++.     ++++  ++.+  .......+++|||++|.+|.+++..... .......++..++.+ +
T Consensus        44 ---~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~-l  112 (254)
T cd06627          44 ---KSIMQEIDLLKNLK-----HPNI--VKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQG-L  112 (254)
T ss_pred             ---HHHHHHHHHHHhCC-----CCCc--cEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHH-H
Confidence               12234444444332     1222  2222  1123445799999999999998865321 122223344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|+||+++       .++      .++|+|||++..+.......     ........+.+.|.... 
T Consensus       113 ~~lH~~~i~H~dl~p~ni~i~-------~~~------~~~l~d~~~~~~~~~~~~~~-----~~~~~~~~y~~pe~~~~-  173 (254)
T cd06627         113 AYLHEQGVIHRDIKAANILTT-------KDG------VVKLADFGVATKLNDVSKDD-----ASVVGTPYWMAPEVIEM-  173 (254)
T ss_pred             HHHhhCCcccCCCCHHHEEEC-------CCC------CEEEeccccceecCCCcccc-----cccccchhhcCHhhhcC-
Confidence            789999999999999999998       566      89999999998876544320     00011112344444322 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .......|.++++..+.+++.+.
T Consensus       174 ~~~~~~~Dv~~lG~~l~~l~~g~  196 (254)
T cd06627         174 SGASTASDIWSLGCTVIELLTGN  196 (254)
T ss_pred             CCCCcchhHHHHHHHHHHHHhCC
Confidence            22344578888888888877653

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.40  E-value=3e-12  Score=128.73  Aligned_cols=188  Identities=15%  Similarity=0.053  Sum_probs=114.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ...||.|++|.||+|++..+       ++.|+||.........                                     
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~-------~~~v~~k~~~~~~~~~-------------------------------------   48 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLST-------QVRIAIKEIPERDSRY-------------------------------------   48 (268)
T ss_pred             eEEEecCCceEEEEeEecCC-------CcEEEEEEecCCCHHH-------------------------------------
Confidence            56899999999999998764       6899999765442110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc----chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG----HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~----~~~~~~~la~~~i~  442 (581)
                        .-++.+|+..+.++.     ++++.  +.+.  ......+++|||++|.+|.+++.....    .......++..++.
T Consensus        49 --~~~~~~e~~~l~~l~-----h~~iv--~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~  119 (268)
T cd06624          49 --VQPLHEEIALHSYLK-----HRNIV--QYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILE  119 (268)
T ss_pred             --HHHHHHHHHHHHhcC-----CCCee--eeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHH
Confidence              012344554444332     22221  2221  122345799999999999998864211    11111223333333


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..+|..|++|+|++|.||+++.      .++      .++|+|||++..+........     .....-.+.+.|.+
T Consensus       120 a-l~~lH~~~i~h~dl~p~nil~~~------~~~------~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~~aPE~~  181 (268)
T cd06624         120 G-LKYLHDNQIVHRDIKGDNVLVNT------YSG------VVKISDFGTSKRLAGINPCTE-----TFTGTLQYMAPEVI  181 (268)
T ss_pred             H-HHHHHHCCEeecCCCHHHEEEcC------CCC------eEEEecchhheecccCCCccc-----cCCCCccccChhhh
Confidence            3 77899999999999999999971      244      899999999876543221100     00011233455554


Q ss_pred             Hhhc-CCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLS-KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~-~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .... ......|.++|+..+.+++.+
T Consensus       182 ~~~~~~~~~~~Dv~slGvvl~~l~~g  207 (268)
T cd06624         182 DKGPRGYGAPADIWSLGCTIVEMATG  207 (268)
T ss_pred             ccccccCCchhhhHHHHHHHHHHHhC
Confidence            3321 133456888988888888766

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.40  E-value=1.9e-12  Score=128.98  Aligned_cols=184  Identities=20%  Similarity=0.158  Sum_probs=113.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|....        ++.+|||+...+...                                      
T Consensus         9 ~~~ig~g~~g~v~~~~~~~--------~~~~~~k~~~~~~~~--------------------------------------   42 (256)
T cd05112           9 VQEIGSGQFGLVWLGYWLE--------KRKVAIKTIREGAMS--------------------------------------   42 (256)
T ss_pred             EeeecCcccceEEEEEEeC--------CCeEEEEECCCCCCC--------------------------------------
Confidence            5789999999999998864        478999987644210                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                        +-+|.+|.+.+.++.     +++  +++.+  .......++||||++|.+|.+++......  ......++..++.+ 
T Consensus        43 --~~~~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~-  112 (256)
T cd05112          43 --EEDFIEEAQVMMKLS-----HPK--LVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEG-  112 (256)
T ss_pred             --HHHHHHHHHHHHhCC-----CCC--eeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHH-
Confidence              112344555554431     222  22222  22334568999999999999988643221  11112233333333 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|+||+++       .++      .++|+|||++..+..........    ....-.+.+.|.+..
T Consensus       113 l~~lH~~~i~h~dl~p~ni~i~-------~~~------~~~l~d~g~~~~~~~~~~~~~~~----~~~~~~~~aPe~~~~  175 (256)
T cd05112         113 MAYLESSNVIHRDLAARNCLVG-------ENQ------VVKVSDFGMTRFVLDDQYTSSTG----TKFPVKWSSPEVFSF  175 (256)
T ss_pred             HHHHHHCCccccccccceEEEc-------CCC------eEEECCCcceeecccCcccccCC----CccchhhcCHhHhcc
Confidence            6778999999999999999998       566      89999999987654332110000    000012345554432


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       +......|.++|+..+.+++.
T Consensus       176 -~~~~~~~Dv~slG~~l~el~~  196 (256)
T cd05112         176 -SKYSSKSDVWSFGVLMWEVFS  196 (256)
T ss_pred             -CCcChHHHHHHHHHHHHHHHc
Confidence             334445688888888888775

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.40  E-value=1.7e-12  Score=131.92  Aligned_cols=124  Identities=18%  Similarity=0.198  Sum_probs=78.5

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeeccccccccccc-CCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF-RSK  481 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~-~~~  481 (581)
                      ...++||||++|.+|..++....+  .......++..++.+ +..+|..|++|+|+||.||+++       ..|.. ...
T Consensus        89 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~-l~~lH~~~iiH~dlkp~Nill~-------~~~~~~~~~  160 (274)
T cd05076          89 SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASA-LSYLEDKNLVHGNVCAKNILLA-------RLGLAEGTS  160 (274)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHHHHcCCccCCCCCcccEEEe-------ccCcccCcc
Confidence            456899999999999998754222  112223444444444 7889999999999999999998       22210 113


Q ss_pred             CeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhh
Q 008021          482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLP  545 (581)
Q Consensus       482 ~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~  545 (581)
                      +.+++.|||+..........         .....+.+.|.+..........|.++|+..+.++.
T Consensus       161 ~~~kl~d~g~~~~~~~~~~~---------~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~  215 (274)
T cd05076         161 PFIKLSDPGVSFTALSREER---------VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEIC  215 (274)
T ss_pred             ceeeecCCcccccccccccc---------ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHH
Confidence            36899999987543221110         11123445555544333445678888888887764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.39  E-value=1.5e-12  Score=139.89  Aligned_cols=184  Identities=15%  Similarity=0.078  Sum_probs=112.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|..+..     ..++.||||+...+.  ...                                   
T Consensus        97 ~~~Lg~G~~g~Vy~~~~~~~-----~~~~~v~vK~~~~~~--~~~-----------------------------------  134 (392)
T PHA03207         97 LSSLTPGSEGEVFVCTKHGD-----EQRKKVIVKAVTGGK--TPG-----------------------------------  134 (392)
T ss_pred             EEeecCCCCeEEEEEEEcCC-----ccceeEEEEeccccc--cHH-----------------------------------
Confidence            47899999999999987542     125899999865431  111                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                             +|.+.+.++.     ++++  ++.+  .......+++||++.| .+.+++..... .......++..++.+ +
T Consensus       135 -------~E~~il~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~ql~~a-L  198 (392)
T PHA03207        135 -------REIDILKTIS-----HRAI--INLIHAYRWKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEA-L  198 (392)
T ss_pred             -------HHHHHHHhcC-----CCCc--cceeeeEeeCCEEEEEehhcCC-CHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence                   2333332221     1211  1222  1122345799999976 56666643211 112223444444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+||||.|||++       .++      .++|+|||++..+.......-.   ....-...+.++|.+. .
T Consensus       199 ~~LH~~givHrDlkp~Nill~-------~~~------~~~l~DfG~a~~~~~~~~~~~~---~~~~gt~~y~aPE~~~-~  261 (392)
T PHA03207        199 AYLHGRGIIHRDVKTENIFLD-------EPE------NAVLGDFGAACKLDAHPDTPQC---YGWSGTLETNSPELLA-L  261 (392)
T ss_pred             HHHHHCCccccCCCHHHEEEc-------CCC------CEEEccCccccccCcccccccc---cccccccCccCHhHhc-C
Confidence            889999999999999999998       666      8999999998766543211100   0111123345566553 3


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..+....|.|+|+..+.+++.+
T Consensus       262 ~~~~~~~DvwslGvil~el~~g  283 (392)
T PHA03207        262 DPYCAKTDIWSAGLVLFEMSVK  283 (392)
T ss_pred             CCCCchhhHHHHHHHHHHHHHC
Confidence            4445568999999999999876

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.39  E-value=2e-12  Score=128.86  Aligned_cols=189  Identities=15%  Similarity=0.059  Sum_probs=114.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||++....+       ++.||+|..+-.....                            ..       
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~-------~~~~~iK~~~~~~~~~----------------------------~~-------   42 (255)
T cd08219           5 LRVVGEGSFGRALLVQHVNS-------DQKYAMKEIRLPKSSS----------------------------AV-------   42 (255)
T ss_pred             EEEeeccCCeEEEEEEEcCC-------CceEEEEEEEcCcchH----------------------------HH-------
Confidence            47899999999999998764       6899999864221000                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l  445 (581)
                         -++.+|...+.++     +++++.-..-........+++|||++|.++.+++......   ......++..++.+ +
T Consensus        43 ---~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a-l  113 (255)
T cd08219          43 ---EDSRKEAVLLAKM-----KHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG-V  113 (255)
T ss_pred             ---HHHHHHHHHHHhC-----CCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH-H
Confidence               0122333333222     1222221111122234558999999999999887542211   11112333444443 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .++      .++++|||++..+........     .......+.++|.+.. 
T Consensus       114 ~~lH~~~i~H~dl~p~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~~aPE~~~~-  174 (255)
T cd08219         114 QHIHEKRVLHRDIKSKNIFLT-------QNG------KVKLGDFGSARLLTSPGAYAC-----TYVGTPYYVPPEIWEN-  174 (255)
T ss_pred             HHHhhCCcccCCCCcceEEEC-------CCC------cEEEcccCcceeecccccccc-----cccCCccccCHHHHcc-
Confidence            889999999999999999998       666      899999999877654322110     0011112344554432 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       175 ~~~~~~~Dv~slG~i~~~l~~g  196 (255)
T cd08219         175 MPYNNKSDIWSLGCILYELCTL  196 (255)
T ss_pred             CCcCchhhhhhhchhheehhhc
Confidence            3344567888888888888766

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.39  E-value=6.7e-12  Score=124.11  Aligned_cols=127  Identities=20%  Similarity=0.180  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCe
Q 008021          374 LAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNF  453 (581)
Q Consensus       374 f~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~  453 (581)
                      +++|++.+.++..      ...+|+++..  ...+++|||++|.+|.+....  .    ...+...+.. .++++|..|+
T Consensus        48 ~~rE~~iL~~L~~------~~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~~--~----~~~~~~qi~~-~L~~lH~~GI  112 (218)
T PRK12274         48 ARREALALRQLDG------LPRTPRLLHW--DGRHLDRSYLAGAAMYQRPPR--G----DLAYFRAARR-LLQQLHRCGV  112 (218)
T ss_pred             HHHHHHHHHhcCC------CCCCCEEEEE--cCEEEEEeeecCccHHhhhhh--h----hHHHHHHHHH-HHHHHHHCcC
Confidence            4567777765532      2346777642  457899999999999764321  1    1123333333 4888999999


Q ss_pred             EecCC-CCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCC
Q 008021          454 IHADM-HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP  532 (581)
Q Consensus       454 ~H~Dl-HPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~  532 (581)
                      +|+|+ ||+|||++       .+|      +++|+|||++...++..+     .+.-+..+|-..+.+....  ..+...
T Consensus       113 vHrDL~kp~NILv~-------~~g------~i~LIDFG~A~~~~~~~~-----~~r~L~~rDl~~llk~~~~--y~~~~l  172 (218)
T PRK12274        113 AHNDLAKEANWLVQ-------EDG------SPAVIDFQLAVRGNPRAR-----WMRLLAREDLRHLLKHKRM--YCPAAL  172 (218)
T ss_pred             ccCCCCCcceEEEc-------CCC------CEEEEECCCceecCCcch-----HHHHHHHHHHHHHHHHHHh--cCCCCC
Confidence            99999 79999998       667      899999999987665333     2233345787777777644  333344


Q ss_pred             CHH
Q 008021          533 NPK  535 (581)
Q Consensus       533 D~~  535 (581)
                      ++.
T Consensus       173 ~~~  175 (218)
T PRK12274        173 TPV  175 (218)
T ss_pred             CHH
Confidence            554

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.39  E-value=2.4e-12  Score=120.90  Aligned_cols=131  Identities=18%  Similarity=0.152  Sum_probs=92.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+|++.|..++||+++..         |+.|+||+.+++..                                       
T Consensus         3 ~~~l~~G~~~~vy~~~~~---------~~~~~lK~~~~~~~---------------------------------------   34 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA---------NKKYVVRIPGNGTE---------------------------------------   34 (170)
T ss_pred             eeecCCcccCceEEEEEC---------CeEEEEEeCCCCcc---------------------------------------
Confidence            478999999999999874         47899998766521                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                       ...++.+|+..+..+.+.      ..+|+++....+..++||||++|.++.+.. .  .    .......+.+ .+..|
T Consensus        35 -~~~~~~~E~~~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~-~--~----~~~~~~~l~~-~l~~L   99 (170)
T cd05151          35 -LLINRENEAENSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTED-F--S----DPENLEKIAK-LLKKL   99 (170)
T ss_pred             -cccCHHHHHHHHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCcccccc-c--c----CHHHHHHHHH-HHHHH
Confidence             013445677777766542      236888876666789999999999887531 0  0    1112223333 36678


Q ss_pred             hhCC-----eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          449 LVDN-----FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       449 ~~~G-----~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      |..+     ++|+|+||+||+++       . +      +++++|||.+..-+
T Consensus       100 H~~~~~~~~~~HgD~~~~Nil~~-------~-~------~~~liDf~~a~~~~  138 (170)
T cd05151         100 HSSPLPDLVPCHNDLLPGNFLLD-------D-G------RLWLIDWEYAGMND  138 (170)
T ss_pred             hCCCCCCceeecCCCCcCcEEEE-------C-C------eEEEEecccccCCC
Confidence            8776     59999999999998       2 3      69999999988644

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.39  E-value=4.7e-12  Score=129.32  Aligned_cols=188  Identities=18%  Similarity=0.124  Sum_probs=116.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       ++.|+||+.+-....                             .        
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~-------~~~~~iK~~~~~~~~-----------------------------~--------   59 (285)
T cd06648          24 FVKIGEGSTGIVCIATDKST-------GRQVAVKKMDLRKQQ-----------------------------R--------   59 (285)
T ss_pred             ceEeccCCCeEEEEEEECCC-------CCEEEEEEEeccchh-----------------------------H--------
Confidence            47999999999999998754       689999975311000                             0        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                        +-.+.+|...+.++     +++++.-+..+.......+++|||++|.+|.+++............++..++.+ +..+
T Consensus        60 --~~~~~~e~~~l~~~-----~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~-l~~l  131 (285)
T cd06648          60 --RELLFNEVVIMRDY-----QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKA-LSFL  131 (285)
T ss_pred             --HHHHHHHHHHHHHc-----CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHH-HHHH
Confidence              00122233333222     122222221122233456899999999999998765221222223344444444 7889


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|++|.||+++       .++      .++|+|||++..+........     .......+.+.|.+.. ...
T Consensus       132 H~~~i~H~dl~p~Nil~~-------~~~------~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~-~~~  192 (285)
T cd06648         132 HAQGVIHRDIKSDSILLT-------SDG------RVKLSDFGFCAQVSKEVPRRK-----SLVGTPYWMAPEVISR-LPY  192 (285)
T ss_pred             HhCCeecCCCChhhEEEc-------CCC------cEEEcccccchhhccCCcccc-----cccCCccccCHHHhcC-CCC
Confidence            999999999999999998       666      899999998776543321110     0111223455555432 334


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.++|+..+.+++.+
T Consensus       193 ~~~~Dv~slGv~l~ell~g  211 (285)
T cd06648         193 GTEVDIWSLGIMVIEMVDG  211 (285)
T ss_pred             CCcccHHHHHHHHHHHHhC
Confidence            4567999999999998876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.39  E-value=1.3e-12  Score=133.04  Aligned_cols=189  Identities=15%  Similarity=0.137  Sum_probs=113.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|.||+|+.+.+       |+.||||...+......                         .          
T Consensus        10 ~~~lg~g~~~~vy~~~~~~~-------~~~~~iK~~~~~~~~~~-------------------------~----------   47 (291)
T cd07844          10 LDKLGEGSYATVYKGRSKLT-------GQLVALKEIRLEHEEGA-------------------------P----------   47 (291)
T ss_pred             EEEEeecCCeEEEEEEEcCC-------CcEEEEEEEecccccCC-------------------------c----------
Confidence            57999999999999998764       68999998765421100                         0          


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l~  446 (581)
                         ..+.+|...+.++.     ++++.-...+.......++||||++| +|.+++......  ......++..++++ +.
T Consensus        48 ---~~~~~E~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~a-l~  117 (291)
T cd07844          48 ---FTAIREASLLKDLK-----HANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRG-LA  117 (291)
T ss_pred             ---hhHHHHHHHHhhCC-----CcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHH-HH
Confidence               00122433333321     22222111122222345799999997 788877542221  11112233333433 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|++|.||+++       .+|      .++|+|||++.......... ...    .....+.+.|.+....
T Consensus       118 ~lH~~~i~H~dl~p~nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~-~~~----~~~~~~~aPE~~~~~~  179 (291)
T cd07844         118 YCHQRRVLHRDLKPQNLLIS-------ERG------ELKLADFGLARAKSVPSKTY-SNE----VVTLWYRPPDVLLGST  179 (291)
T ss_pred             HHHhCCeecccCCHHHEEEc-------CCC------CEEECccccccccCCCCccc-ccc----ccccccCCcHHhhcCc
Confidence            89999999999999999998       667      89999999986543221110 000    0112344555544333


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.++++..+.+++.+
T Consensus       180 ~~~~~~Dv~slG~il~~l~~g  200 (291)
T cd07844         180 EYSTSLDMWGVGCIFYEMATG  200 (291)
T ss_pred             ccCcHHHHHHHHHHHHHHHhC
Confidence            344556888888888888766

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.39  E-value=1.6e-12  Score=133.04  Aligned_cols=195  Identities=19%  Similarity=0.184  Sum_probs=115.7

Q ss_pred             ceeecccceeEEEEEEeccCC----CC---CCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRY----PG---QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV  361 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~----~G---~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v  361 (581)
                      .+.||+|++|.||+|+...+-    .+   .......||||+.+++.....                             
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------   60 (295)
T cd05097          10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA-----------------------------   60 (295)
T ss_pred             hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHH-----------------------------
Confidence            467999999999999875320    00   001134699999887632110                             


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----------
Q 008021          362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----------  428 (581)
Q Consensus       362 ~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------  428 (581)
                               .-+|.+|.+.+.++.     +++  +++.+.  ......++||||++|.+|.+++.....           
T Consensus        61 ---------~~~~~~ei~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  124 (295)
T cd05097          61 ---------RNDFLKEIKIMSRLK-----NPN--IIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIP  124 (295)
T ss_pred             ---------HHHHHHHHHHHHhCC-----CCC--cCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCC
Confidence                     012344555554432     122  222221  223456899999999999998854210           


Q ss_pred             --chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHH
Q 008021          429 --HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF  506 (581)
Q Consensus       429 --~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l  506 (581)
                        .......++..++.+ +..+|..|++|+|+||+||+++       .++      .++|+|||++..+.........  
T Consensus       125 ~~~~~~~~~i~~~i~~a-l~~lH~~~i~H~dlkp~Nill~-------~~~------~~kl~dfg~~~~~~~~~~~~~~--  188 (295)
T cd05097         125 SVSIANLLYMAVQIASG-MKYLASLNFVHRDLATRNCLVG-------NHY------TIKIADFGMSRNLYSGDYYRIQ--  188 (295)
T ss_pred             cccHHHHHHHHHHHHHH-HHHHHhcCeeccccChhhEEEc-------CCC------cEEecccccccccccCcceecc--
Confidence              001112233344443 6788999999999999999998       666      8999999998765432210000  


Q ss_pred             HHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          507 FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       507 ~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       ......-.+.+.|.+.. +......|.++|+..+.++++
T Consensus       189 -~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~  226 (295)
T cd05097         189 -GRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFT  226 (295)
T ss_pred             -CcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHH
Confidence             00000112344554432 344556799999999988876

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.39  E-value=1.2e-12  Score=137.13  Aligned_cols=125  Identities=13%  Similarity=0.101  Sum_probs=81.2

Q ss_pred             CcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEE
Q 008021          406 PAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVI  485 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lv  485 (581)
                      ..+++|||++| ++.+++....-.......++..++++ +..||..|++|+|+||.||+++       .++      .++
T Consensus        82 ~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~a-L~~LH~~~ivH~dlkp~Nill~-------~~~------~~k  146 (336)
T cd07849          82 DVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRG-LKYIHSANVLHRDLKPSNLLLN-------TNC------DLK  146 (336)
T ss_pred             eEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHhCCeeccCCCHHHEEEC-------CCC------CEE
Confidence            34799999987 66666543221222223344444444 7889999999999999999998       667      899


Q ss_pred             EEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          486 FLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       486 LiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |+|||++..........  ...........+.+.|.+..........|.++|+..+.+++.+
T Consensus       147 l~dfg~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G  206 (336)
T cd07849         147 ICDFGLARIADPEHDHT--GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSN  206 (336)
T ss_pred             ECcccceeecccccccc--CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            99999987654321100  0000011122356677665544455567999999999998876

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.39  E-value=3.2e-12  Score=130.01  Aligned_cols=187  Identities=17%  Similarity=0.137  Sum_probs=115.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|....+       |+.||+|+...+.....                                .   
T Consensus        10 ~~~ig~g~~g~v~~~~~~~~-------~~~~a~k~~~~~~~~~~--------------------------------~---   47 (284)
T cd06620          10 ISDLGAGNGGSVSKVKHIPT-------GTVMAKKVVHIGAKSSV--------------------------------R---   47 (284)
T ss_pred             HHHcCCCCCeEEEEEEEcCC-------CcEEEEEEEEecCcchH--------------------------------H---
Confidence            36799999999999999764       68999998765421110                                0   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                         -++.+|...+..+     +++++.-..-+.......+|||||++|.+|.+++..... .......++..++.+ +..
T Consensus        48 ---~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~-l~~  118 (284)
T cd06620          48 ---KQILRELQIMHEC-----RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEG-LTY  118 (284)
T ss_pred             ---HHHHHHHHHHHHc-----CCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHH-HHH
Confidence               1122333333322     122222111122223456899999999999998754221 111222334333333 566


Q ss_pred             hhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          448 LLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       448 L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      +|. +|++|+|++|.||+++       .++      +++|+|||++..+.......       ......+.+.|.+.. +
T Consensus       119 LH~~~~i~H~dl~p~nil~~-------~~~------~~~l~d~gl~~~~~~~~~~~-------~~~~~~~~aPE~~~~-~  177 (284)
T cd06620         119 LYNVHRIMHRDIKPSNILVN-------SRG------QIKLCDFGVSGELINSIADT-------FVGTSTYMSPERIQG-G  177 (284)
T ss_pred             HHHhcCeeccCCCHHHEEEC-------CCC------cEEEccCCcccchhhhccCc-------cccCcccCCHHHHcc-C
Confidence            775 6999999999999998       666      89999999987653322111       112234455665543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.+.|+..+.+++.+
T Consensus       178 ~~~~~~Di~slG~~l~~l~tg  198 (284)
T cd06620         178 KYTVKSDVWSLGISIIELALG  198 (284)
T ss_pred             CCCccchHHHHHHHHHHHHhC
Confidence            444567999999888888765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.39  E-value=1.3e-12  Score=143.88  Aligned_cols=180  Identities=17%  Similarity=0.056  Sum_probs=111.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|++..+       ++.||||.....   .                                     
T Consensus       174 ~~~Lg~G~~G~Vy~a~~~~~-------~~~vavK~~~~~---~-------------------------------------  206 (461)
T PHA03211        174 HRALTPGSEGCVFESSHPDY-------PQRVVVKAGWYA---S-------------------------------------  206 (461)
T ss_pred             EEEEccCCCeEEEEEEECCC-------CCEEEEeccccc---C-------------------------------------
Confidence            57899999999999999865       689999952110   0                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                           +.+|++.+.++.     +++|.  +.+.  ......+||||++.| +|.+++.....  .......++..++.+ 
T Consensus       207 -----~~~E~~iL~~L~-----HpnIv--~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~a-  272 (461)
T PHA03211        207 -----SVHEARLLRRLS-----HPAVL--ALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSA-  272 (461)
T ss_pred             -----HHHHHHHHHHCC-----CCCCC--cEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH-
Confidence                 123444444331     22222  2221  223456899999976 66666543211  111223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||+|||++       .++      .++|+|||++..+.........   ..+...-.+.+.|.+..
T Consensus       273 L~yLH~~gIvHrDLKP~NILl~-------~~~------~vkL~DFGla~~~~~~~~~~~~---~~~~GT~~Y~APE~~~~  336 (461)
T PHA03211        273 IDYIHGEGIIHRDIKTENVLVN-------GPE------DICLGDFGAACFARGSWSTPFH---YGIAGTVDTNAPEVLAG  336 (461)
T ss_pred             HHHHHHCCEEECcCCHHHEEEC-------CCC------CEEEcccCCceecccccccccc---cccCCCcCCcCHHHHcC
Confidence            7889999999999999999998       666      8999999998766432211110   01112224456666543


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       .......|.|+|+..+.+++.
T Consensus       337 -~~~~~~sDvwSlGviL~El~~  357 (461)
T PHA03211        337 -DPYTPSVDIWSAGLVIFEAAV  357 (461)
T ss_pred             -CCCCchHHHHHHHHHHHHHHH
Confidence             234456799999999888764

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.39  E-value=4.3e-12  Score=126.42  Aligned_cols=188  Identities=13%  Similarity=0.040  Sum_probs=115.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||.|++|+|+.++...+       |+.|++|.....-.                          . ++         
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~-------~~~~~~k~~~~~~~--------------------------~-~~---------   41 (256)
T cd08221           5 IRVLGKGAFGEATLYRRTED-------DSLVVWKEVNLTRL--------------------------S-EK---------   41 (256)
T ss_pred             eeEecccCCceEEEEEEcCC-------CcEEEEEEEeeccc--------------------------c-hh---------
Confidence            46899999999999998764       68999997532100                          0 00         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a  443 (581)
                       ..-++.+|...+.++.     +++  +.+.+  .......+++|||++|++|.+++......   ......++..++.+
T Consensus        42 -~~~~~~~e~~~l~~~~-----h~~--i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~  113 (256)
T cd08221          42 -ERRDALNEIVILSLLQ-----HPN--IIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSA  113 (256)
T ss_pred             -HHHHHHHHHHHHHhCC-----CCC--eeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHH
Confidence             0112345555554431     222  22222  12234558999999999999988653211   11112233333433


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|+||+++       .++      .++++|||.+........     ..........+.+.|.+.
T Consensus       114 -l~~lh~~~i~h~dl~p~ni~~~-------~~~------~~kl~d~~~~~~~~~~~~-----~~~~~~~~~~y~ape~~~  174 (256)
T cd08221         114 -VSYIHKAGILHRDIKTLNIFLT-------KAG------LIKLGDFGISKILGSEYS-----MAETVVGTPYYMSPELCQ  174 (256)
T ss_pred             -HHHHHhCCccccCCChHhEEEe-------CCC------CEEECcCcceEEcccccc-----cccccCCCccccCHhhcC
Confidence             6788999999999999999998       666      899999999876644331     001111223344555543


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. ......|.++|+..+.+++.+
T Consensus       175 ~~-~~~~~~Dv~slG~i~~~l~~g  197 (256)
T cd08221         175 GV-KYNFKSDIWALGCVLYELLTL  197 (256)
T ss_pred             CC-CCCCcchhHHHHHHHHHHHHC
Confidence            32 233456889998888888766

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.39  E-value=1.8e-12  Score=132.32  Aligned_cols=187  Identities=17%  Similarity=0.111  Sum_probs=112.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+...+       |+.|++|+......+.                                     
T Consensus        17 ~~~lg~g~~g~vy~~~~~~~-------~~~~~~k~~~~~~~~~-------------------------------------   52 (292)
T cd06644          17 IGELGDGAFGKVYKAKNKET-------GALAAAKVIETKSEEE-------------------------------------   52 (292)
T ss_pred             hheecCCCCeEEEEEEECCC-------CceEEEEEeccCCHHH-------------------------------------
Confidence            35699999999999999764       6999999865431110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        .-++..|...+.++.     ++++  ++.+  .......++||||++|.++..++.....  .......++..++.+ 
T Consensus        53 --~~~~~~e~~~l~~l~-----h~~i--~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~-  122 (292)
T cd06644          53 --LEDYMVEIEILATCN-----HPYI--VKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEA-  122 (292)
T ss_pred             --HHHHHHHHHHHHhCC-----CCcE--eeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHH-
Confidence              012333444443321     2222  2222  1233456899999999999887643221  112223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||.||+++       .+|      +++|+|||++.......... .    .......+.+.|.+..
T Consensus       123 l~~lH~~~i~H~dlkp~Nili~-------~~~------~~kl~dfg~~~~~~~~~~~~-~----~~~~~~~y~aPE~~~~  184 (292)
T cd06644         123 LQYLHSMKIIHRDLKAGNVLLT-------LDG------DIKLADFGVSAKNVKTLQRR-D----SFIGTPYWMAPEVVMC  184 (292)
T ss_pred             HHHHhcCCeeecCCCcceEEEc-------CCC------CEEEccCccceecccccccc-c----eecCCccccCceeecc
Confidence            6788999999999999999998       666      89999999876543221110 0    0011123344444321


Q ss_pred             ----hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 ----LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 ----l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                          -.......|.++|+..+.+++.+
T Consensus       185 ~~~~~~~~~~~~Dv~slG~il~el~~g  211 (292)
T cd06644         185 ETMKDTPYDYKADIWSLGITLIEMAQI  211 (292)
T ss_pred             ccccCCCCCchhhhHhHHHHHHHHhcC
Confidence                11122346888888888887766

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.38  E-value=5.7e-13  Score=134.84  Aligned_cols=190  Identities=17%  Similarity=0.117  Sum_probs=115.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       ++.||||+.+.....                               .+..   
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~-------~~~v~vK~~~~~~~~-------------------------------~~~~---   44 (288)
T cd07833           6 LGVVGEGAYGVVLKCRNKAT-------GEIVAIKKFKESEDD-------------------------------EDVK---   44 (288)
T ss_pred             EEEecccCCeeEEEEEeCCC-------CcEEEEehhhhhccc-------------------------------ccch---
Confidence            46899999999999999864       689999986543110                               0000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|.+.+.++.     +++  +++.+...  ....++||||++|..+..+...... .......++..++.+ +
T Consensus        45 ---~~~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~-l  113 (288)
T cd07833          45 ---KTALREVKVLRQLR-----HEN--IVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQA-I  113 (288)
T ss_pred             ---hHHHHHHHHHHhcC-----CCC--eeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-H
Confidence               11223333333321     111  22222211  2345799999999877766543211 111122344444443 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|++|+||+++       .++      .++|+|||++..+..........    .....++.+.|.+...
T Consensus       114 ~~LH~~~i~H~dl~~~ni~~~-------~~~------~~kl~d~g~~~~~~~~~~~~~~~----~~~~~~~~~PE~~~~~  176 (288)
T cd07833         114 AYCHSHNIIHRDIKPENILVS-------ESG------VLKLCDFGFARALRARPASPLTD----YVATRWYRAPELLVGD  176 (288)
T ss_pred             HHHHHCCeecCCCCHHHeEEC-------CCC------CEEEEeeecccccCCCccccccC----cccccCCcCCchhcCC
Confidence            889999999999999999998       666      89999999988776544311110    0112334555555443


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       177 ~~~~~~~Dv~slG~~l~~l~~g  198 (288)
T cd07833         177 TNYGKPVDVWAIGCIMAELLDG  198 (288)
T ss_pred             CCcCchhhHHHHHHHHHHHHhC
Confidence            2344567888888888888766

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.38  E-value=1.8e-12  Score=132.07  Aligned_cols=190  Identities=16%  Similarity=0.135  Sum_probs=110.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|..+.+       |+.||||+......+..                                    
T Consensus        10 ~~~ig~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~~~------------------------------------   46 (291)
T cd07870          10 LEKLGEGSYATVYKGISRIN-------GQLVALKVISMKTEEGV------------------------------------   46 (291)
T ss_pred             EEEEEecCCEEEEEEEEcCC-------CcEEEEEEecccCcCCC------------------------------------
Confidence            57899999999999998764       68999998653311100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                        +.++.+|...+.++.     ++++.-..-+.......++||||++| ++.+++.....  .......++..++.+ +.
T Consensus        47 --~~~~~~e~~~l~~l~-----h~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~-L~  117 (291)
T cd07870          47 --PFTAIREASLLKGLK-----HANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRG-LA  117 (291)
T ss_pred             --cHHHHHHHHHHHhcC-----CCCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHH-HH
Confidence              011233443333331     22222111111222346899999976 44444432111  111122344444444 67


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .+|..|++|+|+||.||+++       .+|      .++|+|||++............     ......+.+.|.+....
T Consensus       118 ~lH~~~i~H~dlkp~Nil~~-------~~~------~~~l~Dfg~~~~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~  179 (291)
T cd07870         118 YIHGQHILHRDLKPQNLLIS-------YLG------ELKLADFGLARAKSIPSQTYSS-----EVVTLWYRPPDVLLGAT  179 (291)
T ss_pred             HHHhCCcccCCCChHHEEEc-------CCC------cEEEeccccccccCCCCCCCCC-----ccccccccCCceeecCC
Confidence            89999999999999999998       666      8999999988754322111000     00112233444443222


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ......|.++|+..+.+++.+.
T Consensus       180 ~~~~~~Dv~slG~~l~~l~~g~  201 (291)
T cd07870         180 DYSSALDIWGAGCIFIEMLQGQ  201 (291)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCC
Confidence            2334468999999999988874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=2.3e-12  Score=133.12  Aligned_cols=194  Identities=16%  Similarity=0.115  Sum_probs=117.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||...+.....                          ...        
T Consensus         6 ~~~ig~g~~g~vy~~~~~~~-------~~~~aiK~~~~~~~~~--------------------------~~~--------   44 (316)
T cd05574           6 IKLLGKGDVGRVFLVRLKGT-------GKLFALKVLDKKEMIK--------------------------RNK--------   44 (316)
T ss_pred             eeeecCCccEEEEEEEEcCC-------CcEEEEEEEeccccch--------------------------HHH--------
Confidence            46799999999999999764       6999999876541110                          000        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a  443 (581)
                        .-.+..|...+.++.     ++  .+++.+..  .....+++|||++|.+|.+++......   ......++..++.+
T Consensus        45 --~~~~~~e~~~l~~l~-----~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~  115 (316)
T cd05574          45 --VKRVLTEQEILATLD-----HP--FLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLA  115 (316)
T ss_pred             --HHHHHHHHHHHHhCC-----CC--CchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHH
Confidence              011233444444332     22  23333332  234458999999999999987642211   11122333344443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH----------------HH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE----------------FF  507 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~----------------l~  507 (581)
                       +..+|..|++|+|+||.||+++       .+|      .++|.|||++...+.........                ..
T Consensus       116 -l~~lH~~~i~H~dlkp~Nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (316)
T cd05574         116 -LEYLHLLGIVYRDLKPENILLH-------ESG------HIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETF  181 (316)
T ss_pred             -HHHHHHCCeeccCCChHHeEEc-------CCC------CEEEeecchhhcccccccccccccccccccccccccchhhh
Confidence             6789999999999999999998       666      89999999987654322111000                00


Q ss_pred             H--------HHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          508 K--------AVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       508 ~--------Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .        ..+....+.+.|.+... ......|.++|+..+.+++.+
T Consensus       182 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Di~slG~ll~~l~~g  228 (316)
T cd05574         182 SEEPSFRSNSFVGTEEYIAPEVISGD-GHGSAVDWWTLGILLYEMLYG  228 (316)
T ss_pred             cccccCCCCCCcCccCCcCHHHHcCC-CCCchHHHHHHHHHHHHHhhC
Confidence            0        00011124455555432 233456888888888888766

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.38  E-value=2.5e-12  Score=130.14  Aligned_cols=195  Identities=16%  Similarity=0.132  Sum_probs=113.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|..+...  ....++.||||+.+......                                     
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~--~~~~~~~~aik~~~~~~~~~-------------------------------------   51 (277)
T cd05062          11 SRELGQGSFGMVYEGIAKGVV--KDEPETRVAIKTVNEAASMR-------------------------------------   51 (277)
T ss_pred             eeeeccccCCeEEEEEeccCC--CCCceeEEEEEeccccCCHH-------------------------------------
Confidence            477999999999999875310  01125789999865431100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc-----------hhhHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-----------ERLKSALA  437 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------~~~~~~la  437 (581)
                       ...++.+|...+.++     +++++.-..-+.......++||||++|.+|.+++......           ......++
T Consensus        52 -~~~~~~~e~~~l~~l-----~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (277)
T cd05062          52 -ERIEFLNEASVMKEF-----NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMA  125 (277)
T ss_pred             -HHHHHHHHHHHHHhC-----CCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHH
Confidence             011233444333322     1222211111122234568999999999999998642211           01112233


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..+|..|++|+|+||.||+++       .++      .++|+|||++..+.......-.  -. ....-.+.
T Consensus       126 ~~l~~~-l~~lH~~~~vH~dlkp~Nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~--~~-~~~~~~y~  188 (277)
T cd05062         126 GEIADG-MAYLNANKFVHRDLAARNCMVA-------EDF------TVKIGDFGMTRDIYETDYYRKG--GK-GLLPVRWM  188 (277)
T ss_pred             HHHHHH-HHHHHHCCcccCCcchheEEEc-------CCC------CEEECCCCCccccCCcceeecC--CC-CccCHhhc
Confidence            344444 7889999999999999999999       666      8999999998755332110000  00 00011244


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ++|.+.. +......|.++|+..+.+++.
T Consensus       189 aPE~~~~-~~~~~~~Di~slG~~l~el~~  216 (277)
T cd05062         189 SPESLKD-GVFTTYSDVWSFGVVLWEIAT  216 (277)
T ss_pred             ChhHhhc-CCcCchhHHHHHHHHHHHHHc
Confidence            5555432 334455688888888888875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=3.1e-12  Score=129.51  Aligned_cols=187  Identities=17%  Similarity=0.098  Sum_probs=113.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+...+       ++.||+|+........                                     
T Consensus        10 ~~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~~-------------------------------------   45 (280)
T cd06611          10 IGELGDGAFGKVYKAQHKET-------GLFAAAKIIQIESEEE-------------------------------------   45 (280)
T ss_pred             HHHhcCCCCceEEEEEEcCC-------CcEEEEEEEeeCCHHH-------------------------------------
Confidence            35699999999999998764       6899999976542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        .-++..|+..+.++.     +++  +++.+.  ......++||||++|.+|.+++.....  .......++..++.+ 
T Consensus        46 --~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~-  115 (280)
T cd06611          46 --LEDFMVEIDILSECK-----HPN--IVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEA-  115 (280)
T ss_pred             --HHHHHHHHHHHHhCC-----CCc--eeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH-
Confidence              012334444443332     222  222221  122345799999999999998865321  112223344444443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       .++      +++|+|||+............     .......+.+.|.+..
T Consensus       116 l~~lh~~~i~h~dl~p~nili~-------~~~------~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~y~~PE~~~~  177 (280)
T cd06611         116 LNFLHSHKVIHRDLKAGNILLT-------LDG------DVKLADFGVSAKNKSTLQKRD-----TFIGTPYWMAPEVVAC  177 (280)
T ss_pred             HHHHHHCCcccCCCChhhEEEC-------CCC------CEEEccCccchhhcccccccc-----eeecchhhcCHHHHhh
Confidence            6788999999999999999998       666      899999998776543321110     0011122334444431


Q ss_pred             ----hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 ----LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 ----l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                          -.......|.++|+..+.++..+
T Consensus       178 ~~~~~~~~~~~sDi~slG~il~~l~~g  204 (280)
T cd06611         178 ETFKDNPYDYKADIWSLGITLIELAQM  204 (280)
T ss_pred             cccCCCCCCccccHHHHHHHHHHHHhC
Confidence                11122346888888888777765

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.38  E-value=4.3e-12  Score=128.31  Aligned_cols=187  Identities=16%  Similarity=0.076  Sum_probs=110.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+..+......                                    
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~-------~~~vaiK~~~~~~~~~~------------------------------------   42 (283)
T cd06617           6 IEELGRGAYGVVDKMRHVPT-------GTIMAVKRIRATVNSQE------------------------------------   42 (283)
T ss_pred             EEEecccCCeEEEEEEEcCC-------CcEEEEEEEecCCCcHH------------------------------------
Confidence            46799999999999999865       79999998765422110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhh-c----chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQ-G----HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~-~----~~~~~~~la~~~i  441 (581)
                        |.++..|.....+.    .+++++  ++.+.  ......+++|||++| ++.+++.... .    .......++..++
T Consensus        43 --~~~~~~e~~~~~~~----~~~~~i--v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~  113 (283)
T cd06617          43 --QKRLLMDLDISMRS----VDCPYT--VTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIV  113 (283)
T ss_pred             --HHHHHHHHHHHHHH----cCCCCe--eeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence              11112222221111    122222  11111  123456799999986 5666654321 1    1111123333333


Q ss_pred             HHHHHHhhhC-CeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          442 HALLKMLLVD-NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       442 ~a~l~~L~~~-G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      .+ +..+|.+ |++|+|+||+||+++       .++      .++|+|||++..+........      ......+.++|
T Consensus       114 ~~-l~~lH~~~~i~h~dlkp~nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~~------~~~~~~y~aPE  173 (283)
T cd06617         114 KA-LEYLHSKLSVIHRDVKPSNVLIN-------RNG------QVKLCDFGISGYLVDSVAKTI------DAGCKPYMAPE  173 (283)
T ss_pred             HH-HHHHhhcCCeecCCCCHHHEEEC-------CCC------CEEEeeccccccccccccccc------ccCCccccChh
Confidence            33 7788987 999999999999998       666      899999999887643321110      01122345566


Q ss_pred             HHHhh---cCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRL---SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l---~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+...   .......|.++|+..+.+++.+
T Consensus       174 ~~~~~~~~~~~~~~~Di~slG~~l~~l~~g  203 (283)
T cd06617         174 RINPELNQKGYDVKSDVWSLGITMIELATG  203 (283)
T ss_pred             hcCCcccccccCccccchhhHHHHHHHHhC
Confidence            44321   1123456899999999888876

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.38  E-value=4.5e-12  Score=127.86  Aligned_cols=124  Identities=15%  Similarity=0.177  Sum_probs=80.7

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccc-cCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL-FRSK  481 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~-~~~~  481 (581)
                      ...+++|||++|.++..++.....  .......++..++++ +..+|..|++|+|++|.|||+.       .++. ....
T Consensus        77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~-l~~lH~~~ivH~dlkp~Nill~-------~~~~~~~~~  148 (262)
T cd05077          77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASA-LSYLEDKDLVHGNVCTKNILLA-------REGIDGECG  148 (262)
T ss_pred             CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHHhhhCCeECCCCCcccEEEe-------cCCccCCCC
Confidence            456899999999999988754221  112223455555544 7889999999999999999997       2220 0112


Q ss_pred             CeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhh
Q 008021          482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLP  545 (581)
Q Consensus       482 ~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~  545 (581)
                      +.+++.|||++..+.....         ....-.+.++|.+..........|.|+|+..+.+++
T Consensus       149 ~~~~l~d~g~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~  203 (262)
T cd05077         149 PFIKLSDPGIPITVLSRQE---------CVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEIC  203 (262)
T ss_pred             ceeEeCCCCCCccccCccc---------ccccccccChhhhcCCCCCCchhHHHHHHHHHHHHH
Confidence            3589999998865532210         011223556666543344445679999999988886

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.38  E-value=3.8e-12  Score=128.25  Aligned_cols=187  Identities=16%  Similarity=0.136  Sum_probs=116.1

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|.+|.||+|+...+       +++||+|+.+....+.                               .+.....
T Consensus         5 ~~ig~g~~~~vy~~~~~~~-------~~~~~iK~~~~~~~~~-------------------------------~~~~~~~   46 (282)
T cd07829           5 EKLGEGTYGVVYKARDKKT-------GEIVALKKIRLDNEEE-------------------------------GIPSTAL   46 (282)
T ss_pred             hcccccCcceEEEeeecCC-------CcEEEEEEeccccccc-------------------------------cccHHHH
Confidence            5689999999999999875       6999999987652100                               0000011


Q ss_pred             HHHHHHHHH--HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhh--hcchhhHHHHHHHHHHHHH
Q 008021          370 SQVDLAREA--AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHALL  445 (581)
Q Consensus       370 ~ElDf~~Ea--~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~--~~~~~~~~~la~~~i~a~l  445 (581)
                      .|+......  .|+.++.+.+.             .....++||||+++ +|.+++...  .........++..++.+ +
T Consensus        47 ~e~~~l~~~~~~~i~~~~~~~~-------------~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~-l  111 (282)
T cd07829          47 REISLLKELKHPNIVKLLDVIH-------------TERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRG-L  111 (282)
T ss_pred             HHHHHHHhcCCCCHHHHHhhhh-------------cCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHH-H
Confidence            111111111  12222221111             11345699999986 899988653  11222223444444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|++|.||+++       .++      .++|.|||.+.......... .    .....-.+.+.|.+...
T Consensus       112 ~~LH~~~i~H~~l~~~ni~~~-------~~~------~~~l~d~g~~~~~~~~~~~~-~----~~~~~~~~~aPE~~~~~  173 (282)
T cd07829         112 AYCHSHRILHRDLKPQNILIN-------RDG------VLKLADFGLARAFGIPLRTY-T----HEVVTLWYRAPEILLGS  173 (282)
T ss_pred             HHHHHCCcccCCCChheEEEc-------CCC------CEEEecCCcccccCCCcccc-C----ccccCcCcCChHHhcCC
Confidence            889999999999999999998       666      89999999988765433211 0    00112234566665443


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       174 ~~~~~~~Dv~slG~~l~~l~~~  195 (282)
T cd07829         174 KHYSTAVDIWSVGCIFAEMITG  195 (282)
T ss_pred             cCCCccccHHHHHHHHHHHHhC
Confidence            3555678999999999998876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.38  E-value=3.7e-13  Score=132.18  Aligned_cols=211  Identities=12%  Similarity=0.096  Sum_probs=143.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.+|.|.++.|+.|....+       .++++||+.+|--.+.|.++++||..+..--                      
T Consensus        43 vrk~GRGKYSEVFeg~~~~~-------~eK~ViKiLKPVkkkKIkREikIL~nL~gg~----------------------   93 (338)
T KOG0668|consen   43 VRKVGRGKYSEVFEGINITN-------NEKCVIKILKPVKKKKIKREIKILQNLRGGP----------------------   93 (338)
T ss_pred             HHHHcCccHhhHhcccccCC-------CceEEEeeechHHHHHHHHHHHHHHhccCCC----------------------
Confidence            46799999999999997654       6999999999999999999999988654211                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                                 |+..+.+..+           .+.+....|+.||++......+-..... ..++.-+- .++. .+..+
T Consensus        94 -----------NIi~L~DiV~-----------Dp~SktpaLiFE~v~n~Dfk~ly~tl~d-~dIryY~~-elLk-ALdyC  148 (338)
T KOG0668|consen   94 -----------NIIKLLDIVK-----------DPESKTPSLIFEYVNNTDFKQLYPTLTD-YDIRYYIY-ELLK-ALDYC  148 (338)
T ss_pred             -----------Ceeehhhhhc-----------CccccCchhHhhhhccccHHHHhhhhch-hhHHHHHH-HHHH-HHhHH
Confidence                       1111111111           1122233488999998877765432211 11122222 2223 37788


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..||+|||.||.|+|++.      ...      ++.|||||++...-+..--+..      +...+.+-+|++.+.-.+
T Consensus       149 HS~GImHRDVKPhNvmIdh------~~r------kLrlIDWGLAEFYHp~~eYnVR------VASRyfKGPELLVdy~~Y  210 (338)
T KOG0668|consen  149 HSMGIMHRDVKPHNVMIDH------ELR------KLRLIDWGLAEFYHPGKEYNVR------VASRYFKGPELLVDYQMY  210 (338)
T ss_pred             HhcCcccccCCcceeeech------hhc------eeeeeecchHhhcCCCceeeee------eehhhcCCchheeechhc
Confidence            9999999999999999993      223      8999999999877665544433      455677778999999888


Q ss_pred             CCCCCHHHHHHHHHHhhhH---hhccccHHHHH---------HHHHHHHHHhhHH
Q 008021          529 QNCPNPKAFIEWMRLLPSG---VLRRVIWSILL---------SACSNYLRKFGVI  571 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~---~~~~~~~~~ll---------~~~~~~lr~~~~~  571 (581)
                      .-..|.|+|+|.++.++.+   .|....-.++|         +++...+.+++|-
T Consensus       211 DYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~  265 (338)
T KOG0668|consen  211 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID  265 (338)
T ss_pred             cccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence            8899999999999999865   34443333333         3444455666553

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.38  E-value=3.5e-12  Score=129.26  Aligned_cols=196  Identities=18%  Similarity=0.138  Sum_probs=116.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|..... +| ...+..||+|........                                      
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~-~~-~~~~~~v~ik~~~~~~~~--------------------------------------   50 (277)
T cd05036          11 LRALGHGAFGEVYEGLYRGR-DG-DAVELQVAVKTLPESCSE--------------------------------------   50 (277)
T ss_pred             eeECCCCCCCcEEEEEEecC-CC-CCCceeEEEEEcCCCCCH--------------------------------------
Confidence            47899999999999999751 11 012578999975433111                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhcc------h--hhHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQGH------E--RLKSALAH  438 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~~------~--~~~~~la~  438 (581)
                      ..+.+|.+|...+.++.     ++++  .+.+  .......++||||++|.+|.+++......      .  .....++.
T Consensus        51 ~~~~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~  123 (277)
T cd05036          51 QDESDFLMEALIMSKFN-----HQNI--VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR  123 (277)
T ss_pred             HHHHHHHHHHHHHHhCC-----CCCE--eeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence            11234555655554432     1222  1222  12234568999999999999998653210      0  11122333


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ +..+|..|++|+|++|.||+++       .++   ....++|+|||++..+....-.....   .......+.+
T Consensus       124 qi~~~-l~~LH~~~ivH~dlkp~nil~~-------~~~---~~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~y~a  189 (277)
T cd05036         124 DVAKG-CKYLEENHFIHRDIAARNCLLT-------CKG---PGRVAKIADFGMARDIYRASYYRKGG---RAMLPIKWMP  189 (277)
T ss_pred             HHHHH-HHHHHHCCEeecccchheEEEe-------ccC---CCcceEeccCccccccCCccceecCC---CCCccHhhCC
Confidence            44433 6789999999999999999998       222   11269999999988763321100000   0000013455


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +|.+.. +......|.|.|+..+.+++.
T Consensus       190 PE~~~~-~~~~~~~DiwslG~il~el~~  216 (277)
T cd05036         190 PEAFLD-GIFTSKTDVWSFGVLLWEIFS  216 (277)
T ss_pred             HHHHhc-CCcCchhHHHHHHHHHHHHHc
Confidence            565533 335556799999999988874

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.38  E-value=3.2e-12  Score=131.20  Aligned_cols=188  Identities=17%  Similarity=0.106  Sum_probs=114.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       ++.||+|+....-...                                     
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~-------~~~v~iK~~~~~~~~~-------------------------------------   59 (293)
T cd06647          24 FEKIGQGASGTVYTAIDVAT-------GQEVAIKQMNLQQQPK-------------------------------------   59 (293)
T ss_pred             eeEecCCCCeEEEEEEEcCC-------CCEEEEEEeccccchH-------------------------------------
Confidence            47899999999999998654       6899999853210000                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                        .-.+.+|...+.++    . ++++.-...+.......++||||++|.+|.+++............++..++.+ +..+
T Consensus        60 --~~~~~~e~~~l~~l----~-hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~a-l~~L  131 (293)
T cd06647          60 --KELIINEILVMREN----K-HPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-LEFL  131 (293)
T ss_pred             --HHHHHHHHHHHhhc----C-CCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHH-HHHH
Confidence              00122233222221    1 22221111111123456899999999999998864322222223344444443 6789


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|++|.||+++       .++      .++|+|||++..+.+.....     ........+.+.|.+.. +..
T Consensus       132 H~~gi~H~dL~p~Nili~-------~~~------~~kL~dfg~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~-~~~  192 (293)
T cd06647         132 HSNQVIHRDIKSDNILLG-------MDG------SVKLTDFGFCAQITPEQSKR-----STMVGTPYWMAPEVVTR-KAY  192 (293)
T ss_pred             HhCCEeeccCCHHHEEEc-------CCC------CEEEccCcceeccccccccc-----ccccCChhhcCchhhcc-CCC
Confidence            999999999999999998       666      89999999887665443211     00111223445555432 334


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.++|+..+.+++.+
T Consensus       193 ~~~~Dv~slG~ll~~ll~g  211 (293)
T cd06647         193 GPKVDIWSLGIMAIEMVEG  211 (293)
T ss_pred             CchhhHHHHHHHHHHHHhC
Confidence            4567999999888888766

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.38  E-value=1.4e-12  Score=140.93  Aligned_cols=192  Identities=21%  Similarity=0.213  Sum_probs=128.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +-||+|-||.||.|....        ..+||||.+.++-                                        +
T Consensus       212 ~~LG~G~FG~V~~g~~~~--------~~~vavk~ik~~~----------------------------------------m  243 (468)
T KOG0197|consen  212 RELGSGQFGEVWLGKWNG--------STKVAVKTIKEGS----------------------------------------M  243 (468)
T ss_pred             HHhcCCccceEEEEEEcC--------CCcccceEEeccc----------------------------------------c
Confidence            568999999999999975        3699999988871                                        1


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCC---CcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHH--H
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH---PAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA--L  444 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t---~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a--~  444 (581)
                      .+-+|..||+-+.++++.    +-|.   .| ..|+   +-.|||||++-++|.+|++...+......++.....+.  -
T Consensus       244 ~~~~f~~Ea~iMk~L~H~----~lV~---l~-gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeG  315 (468)
T KOG0197|consen  244 SPEAFLREAQIMKKLRHE----KLVK---LY-GVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEG  315 (468)
T ss_pred             ChhHHHHHHHHHHhCccc----CeEE---EE-EEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHH
Confidence            223566788877766432    1111   11 1222   34799999999999999976333222223343333332  3


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH----H-HHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG----R-TAA  519 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~----~-~~~  519 (581)
                      +..|-..++|||||-.-||||+       +++      .+++.||||++.+.++....         ..++    . .++
T Consensus       316 M~YLes~~~IHRDLAARNiLV~-------~~~------~vKIsDFGLAr~~~d~~Y~~---------~~~~kfPIkWtAP  373 (468)
T KOG0197|consen  316 MAYLESKNYIHRDLAARNILVD-------EDL------VVKISDFGLARLIGDDEYTA---------SEGGKFPIKWTAP  373 (468)
T ss_pred             HHHHHhCCccchhhhhhheeec-------cCc------eEEEcccccccccCCCceee---------cCCCCCCceecCH
Confidence            6667789999999999999999       666      89999999999655543221         1111    1 355


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhhH---hhccccHHHHHHH
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPSG---VLRRVIWSILLSA  560 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~~---~~~~~~~~~ll~~  560 (581)
                      |++ ..+......|+|+|+--|.|+++.   ...+....+++..
T Consensus       374 Ea~-~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~  416 (468)
T KOG0197|consen  374 EAL-NYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLEL  416 (468)
T ss_pred             HHH-hhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHH
Confidence            665 446666778999999999999876   1233444444433

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.38  E-value=4.5e-12  Score=133.47  Aligned_cols=39  Identities=26%  Similarity=0.474  Sum_probs=34.6

Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      +..+|..|++|+|+||.||+++       .++      .++|+|||++..+.
T Consensus       192 l~~lH~~~i~H~dikp~Nil~~-------~~~------~~kl~dfg~~~~~~  230 (343)
T cd05103         192 MEFLASRKCIHRDLAARNILLS-------ENN------VVKICDFGLARDIY  230 (343)
T ss_pred             HHHHHhCCeecCCCccCeEEEc-------CCC------cEEEEecccccccc
Confidence            6788999999999999999998       566      89999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.38  E-value=3.1e-12  Score=129.88  Aligned_cols=194  Identities=15%  Similarity=0.096  Sum_probs=115.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+++....   ....++.||||+.+.+....                                     
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~---~~~~~~~vaiK~~~~~~~~~-------------------------------------   48 (283)
T cd05080           9 IRVLGEGHFGKVSLYCYDPA---NDGTGEMVAVKTLKRECGQQ-------------------------------------   48 (283)
T ss_pred             ceecccCCCcEEEEeeEccc---cCCCCceEEEEEeccccChH-------------------------------------
Confidence            36799999999988764321   11236899999876542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--C--CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--L--VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l--~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                       .+-.+.+|.+.+.++.     ++++  ++.+..  .  ....+++|||++|.+|.+++............++..++.+ 
T Consensus        49 -~~~~~~~E~~~l~~l~-----h~~i--~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~-  119 (283)
T cd05080          49 -NTSGWKKEINILKTLY-----HENI--VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEG-  119 (283)
T ss_pred             -HHHHHHHHHHHHHhCC-----CCCE--eeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHH-
Confidence             0112344544444331     2222  222211  1  1234799999999999998865322222223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       .++      .++|.|||++..+.......-  .-......-.+.++|.+..
T Consensus       120 l~~lH~~~i~H~dlkp~Nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~  184 (283)
T cd05080         120 MAYLHSQHYIHRDLAARNVLLD-------NDR------LVKIGDFGLAKAVPEGHEYYR--VREDGDSPVFWYAVECLKE  184 (283)
T ss_pred             HHHHHHCCeeccccChheEEEc-------CCC------cEEEeecccccccCCcchhhc--cCCCCCCCceeeCHhHhcc
Confidence            7889999999999999999998       566      899999999887654221100  0000000001234454422


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .......|.++|+..+.+++++
T Consensus       185 -~~~~~~~Di~slG~~l~el~tg  206 (283)
T cd05080         185 -NKFSYASDVWSFGVTLYELLTH  206 (283)
T ss_pred             -cCCCcccccHHHHHHHHHHHhC
Confidence             3344567999999999998876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.38  E-value=1.2e-12  Score=132.64  Aligned_cols=190  Identities=15%  Similarity=0.099  Sum_probs=109.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|+||+|+...+       |+.||||..+......                           +         
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~---------------------------~---------   41 (284)
T cd07860           5 VEKIGEGTYGVVYKARNKLT-------GEVVALKKIRLDTETE---------------------------G---------   41 (284)
T ss_pred             eeeecCCCceEEEEEEECCC-------CCEEEEEEcccccccc---------------------------c---------
Confidence            57899999999999999764       6899999865431100                           0         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch---hhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE---RLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~---~~~~~la~~~i~a~l  445 (581)
                       .+-.+.+|.+.+.++.     ++++.-..-+.......++||||++| ++.+++.......   .....++..++.+ +
T Consensus        42 -~~~~~~~E~~~l~~l~-----h~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~-l  113 (284)
T cd07860          42 -VPSTAIREISLLKELN-----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQG-L  113 (284)
T ss_pred             -cchHHHHHHHHHHhcC-----CCCCcchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHH-H
Confidence             0011233443333331     12211111111122345799999975 7887765422111   1112333334443 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|+||+++       .++      .++|+|||++..+..........     .....+.++|.+...
T Consensus       114 ~~lh~~~i~H~~l~p~nill~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~-----~~~~~y~aPE~~~~~  175 (284)
T cd07860         114 AFCHSHRVLHRDLKPQNLLIN-------TEG------AIKLADFGLARAFGVPVRTYTHE-----VVTLWYRAPEILLGC  175 (284)
T ss_pred             HHHHHCCeecCCCCHHHEEEC-------CCC------CEEEeeccchhhcccCccccccc-----cccccccCCeEEecC
Confidence            789999999999999999998       667      89999999887654322111000     001122333333221


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++++
T Consensus       176 ~~~~~~~Dv~slG~il~~l~tg  197 (284)
T cd07860         176 KYYSTAVDIWSLGCIFAEMVTR  197 (284)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHC
Confidence            2223346888888888888776

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.38  E-value=4.3e-12  Score=130.54  Aligned_cols=198  Identities=16%  Similarity=0.138  Sum_probs=110.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|.||+|+....-.....++..||||+........   +                                 
T Consensus        20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~---~---------------------------------   63 (304)
T cd05101          20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEK---D---------------------------------   63 (304)
T ss_pred             cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchH---H---------------------------------
Confidence            5899999999999998632100011225689999876442110   0                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc-----------------hh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-----------------ER  431 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------------~~  431 (581)
                        .-++.+|...+..+    .+++++.-..-........+++|||++|.+|.+++......                 ..
T Consensus        64 --~~~~~~E~~~l~~l----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  137 (304)
T cd05101          64 --LSDLVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFK  137 (304)
T ss_pred             --HHHHHHHHHHHHhh----ccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHH
Confidence              01122333333322    11222211111111223457999999999999998652110                 00


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ....++..++++ +..+|..|++|+|+||.||+++       .++      .++|+|||.+..+...........   -.
T Consensus       138 ~~~~~~~qi~~a-l~~LH~~givH~dlkp~Nili~-------~~~------~~kl~D~g~~~~~~~~~~~~~~~~---~~  200 (304)
T cd05101         138 DLVSCTYQVARG-MEYLASQKCIHRDLAARNVLVT-------ENN------VMKIADFGLARDVNNIDYYKKTTN---GR  200 (304)
T ss_pred             HHHHHHHHHHHH-HHHHHHCCeeecccccceEEEc-------CCC------cEEECCCccceecccccccccccC---CC
Confidence            112233344444 7889999999999999999998       666      899999999887644321110000   00


Q ss_pred             hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          512 RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..-.+.+.|.+.. .......|.++|+..+.+++.
T Consensus       201 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~  234 (304)
T cd05101         201 LPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT  234 (304)
T ss_pred             CCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHc
Confidence            0012344444422 223344577777777777654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.37  E-value=4.4e-12  Score=130.15  Aligned_cols=146  Identities=18%  Similarity=0.211  Sum_probs=91.2

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|. .+.||.|++|+||+|+++.+  |   ....|++|+.+......                            .    
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~--~---~~~~~~ik~~~~~~~~~----------------------------~----   45 (297)
T cd05089           3 DIKFEDVIGEGNFGQVIRAMIKKD--G---LKMNAAIKMLKEFASEN----------------------------D----   45 (297)
T ss_pred             cceeeeeecCCCcceEEEEEecCC--C---CcceeEEEEccccCCHH----------------------------H----
Confidence            344 57899999999999998763  2   12357888754321110                            0    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc--------------
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG--------------  428 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~--------------  428 (581)
                            .-++.+|...+.++.    .++++  .+.+  .......+++|||+++.+|.+++.....              
T Consensus        46 ------~~~~~~E~~~l~~l~----~hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~  113 (297)
T cd05089          46 ------HRDFAGELEVLCKLG----HHPNI--INLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTA  113 (297)
T ss_pred             ------HHHHHHHHHHHHhhc----CCCch--hheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCcc
Confidence                  012344555554442    12222  1221  1122345799999999999999854211              


Q ss_pred             ---chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc
Q 008021          429 ---HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE  494 (581)
Q Consensus       429 ---~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~  494 (581)
                         .......++..++.+ ++.+|..|++|+|+||.||+++       .++      .++|+|||++..
T Consensus       114 ~~l~~~~~~~i~~qi~~a-l~~lH~~~ivH~dlkp~Nill~-------~~~------~~kl~dfg~~~~  168 (297)
T cd05089         114 STLTSQQLLQFASDVATG-MQYLSEKQFIHRDLAARNVLVG-------ENL------ASKIADFGLSRG  168 (297)
T ss_pred             CCCCHHHHHHHHHHHHHH-HHHHHHCCcccCcCCcceEEEC-------CCC------eEEECCcCCCcc
Confidence               001112233334433 7889999999999999999998       566      899999998754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.37  E-value=5.3e-12  Score=128.40  Aligned_cols=186  Identities=18%  Similarity=0.145  Sum_probs=118.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.+|+|++|+||+|....+       ++.|++|+......                                       
T Consensus        24 ~~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~---------------------------------------   57 (286)
T cd06614          24 LEKIGEGASGEVYKATDRAT-------GKEVAIKKMRLRKQ---------------------------------------   57 (286)
T ss_pred             hHhccCCCCeEEEEEEEccC-------CcEEEEEEEecCch---------------------------------------
Confidence            36899999999999999754       68999999765421                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhh--cchhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~--~~~~~~~~la~~~i~a~  444 (581)
                       .+-.+.+|...+.++.     ++++  ++.+  .......+++|||++|.+|.+++....  ........++..++++ 
T Consensus        58 -~~~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~-  128 (286)
T cd06614          58 -NKELIINEILIMKDCK-----HPNI--VDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQG-  128 (286)
T ss_pred             -hHHHHHHHHHHHHHCC-----CCCe--eEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHH-
Confidence             0011223333332221     1222  1221  112345679999999999999987642  1222223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       .+|      .++|+|||.+..+.......     ........+.++|.+..
T Consensus       129 L~~lH~~gi~H~dl~p~ni~i~-------~~~------~~~l~d~~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~  190 (286)
T cd06614         129 LEYLHSQNVIHRDIKSDNILLS-------KDG------SVKLADFGFAAQLTKEKSKR-----NSVVGTPYWMAPEVIKR  190 (286)
T ss_pred             HHHHHhCCeeeCCCChhhEEEc-------CCC------CEEECccchhhhhccchhhh-----ccccCCcccCCHhHhcC
Confidence            6788999999999999999998       667      89999999887665432211     11112234455555433


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                       .......|.++|+..+.+++++.
T Consensus       191 -~~~~~~~Dv~slGvil~~l~~g~  213 (286)
T cd06614         191 -KDYGPKVDIWSLGIMCIEMAEGE  213 (286)
T ss_pred             -CCCCCccccHHHHHHHHHHHhCC
Confidence             33445679999999999988763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=4.5e-12  Score=126.30  Aligned_cols=188  Identities=19%  Similarity=0.103  Sum_probs=115.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||.|++|.||+|....+       ++.+++|+......+.                             .       
T Consensus         8 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~-----------------------------~-------   44 (262)
T cd06613           8 IQRIGSGTYGDVYKARDIAT-------GELVAIKVIKLEPGDD-----------------------------F-------   44 (262)
T ss_pred             EEEecCCCceEEEEeEecCC-------CCEEEEEEEEcCchhh-----------------------------H-------
Confidence            57899999999999999764       6899999876432110                             0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                         -.+.+|...+.++     ++++  +.+.+.  ......+++|||++|.+|.+++.....  .......+...++.+ 
T Consensus        45 ---~~~~~e~~~l~~~-----~h~~--i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~-  113 (262)
T cd06613          45 ---EIIQQEISMLKEC-----RHPN--IVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKG-  113 (262)
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--hhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHH-
Confidence               0112233333322     1122  122221  123345799999999999998765311  111122344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       .+|      .++|+|||++..+.......     ........+.+.|.+..
T Consensus       114 l~~lh~~~i~h~dl~p~ni~i~-------~~~------~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~y~~Pe~~~~  175 (262)
T cd06613         114 LAYLHETGKIHRDIKGANILLT-------EDG------DVKLADFGVSAQLTATIAKR-----KSFIGTPYWMAPEVAAV  175 (262)
T ss_pred             HHHHHhCCceecCCChhhEEEC-------CCC------CEEECccccchhhhhhhhcc-----ccccCCccccCchhhcc
Confidence            6778999999999999999999       666      89999999988765432110     00111223444554432


Q ss_pred             h--cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          525 L--SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       525 l--~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .  .......|.+.|+..+.+++++.
T Consensus       176 ~~~~~~~~~~Di~slG~~l~~~~tg~  201 (262)
T cd06613         176 ERKGGYDGKCDIWALGITAIELAELQ  201 (262)
T ss_pred             cccCCcCchhhhHHHHHHHHHHHhCC
Confidence            2  13334568899998888888763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.37  E-value=2.5e-12  Score=129.68  Aligned_cols=194  Identities=18%  Similarity=0.125  Sum_probs=116.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....   +...++.||||+..+....                                      
T Consensus         9 ~~~ig~g~~~~v~~~~~~~~---~~~~~~~~avK~~~~~~~~--------------------------------------   47 (284)
T cd05038           9 IKQLGEGHFGKVELCRYDPL---GDNTGEQVAVKSLNHSGEE--------------------------------------   47 (284)
T ss_pred             heeeccCCCeeEEEeeecCC---CCCCceEEEEEEeccccch--------------------------------------
Confidence            37899999999999997532   0123689999997765221                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cC--CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PL--VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l--~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~  442 (581)
                      ..+-+|.+|.+.+.++.     +++  +++.+.  ..  ....+++|||++|.+|.+++.....  .......++..++.
T Consensus        48 ~~~~~~~~ei~~l~~l~-----~~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~  120 (284)
T cd05038          48 QHRSDFEREIEILRTLD-----HEN--IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICK  120 (284)
T ss_pred             HHHHHHHHHHHHHHhCC-----CCC--hheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHH
Confidence            01122344444333321     121  222211  11  1235799999999999999865321  11112334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..+|..|++|+|++|.||+++       .++      .++|.|||++..+..........  ........+.+.+.+
T Consensus       121 a-L~~lH~~~i~H~dl~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~--~~~~~~~~~~~Pe~~  184 (284)
T cd05038         121 G-MDYLGSQRYIHRDLAARNILVE-------SED------LVKISDFGLAKVLPEDKDYYYVK--EPGESPIFWYAPECL  184 (284)
T ss_pred             H-HHHHHhCCeecCCCCHHhEEEc-------CCC------CEEEcccccccccccCCcceecc--CCCCCcccccCcHHH
Confidence            4 6789999999999999999998       666      89999999998776332110000  000000112334443


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. .......|.+.|+..+.+++++
T Consensus       185 ~~-~~~~~~~Di~slG~~l~el~tg  208 (284)
T cd05038         185 RT-SKFSSASDVWSFGVTLYELFTY  208 (284)
T ss_pred             cc-CCCCcccchHHHhhhhheeecc
Confidence            22 3344567889999888888875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.37  E-value=1.9e-12  Score=130.11  Aligned_cols=189  Identities=14%  Similarity=0.141  Sum_probs=107.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|....+  +   ....||||.........                           +..        
T Consensus         5 ~~ig~G~~g~V~~~~~~~~--~---~~~~~a~k~~~~~~~~~---------------------------~~~--------   44 (272)
T cd05075           5 KTLGEGEFGSVMEGQLNQD--D---SILKVAVKTMKIAICTR---------------------------SEM--------   44 (272)
T ss_pred             cccCcccCceEEEeEEccC--C---CeeeEEEEecccCcCCH---------------------------HHH--------
Confidence            5689999999999998753  1   01379999865442110                           000        


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccc--------cCCCCcEEEEeccCCccHHHHHHhhhc-------chhhHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--------PLVHPAVLVETYEQGECVSRYVDELQG-------HERLKS  434 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--------~l~t~~VLVmEyi~G~~L~~~l~~~~~-------~~~~~~  434 (581)
                        -++..|...+.++.     +++  +++.+.        ......+++|||++|++|.+++.....       ......
T Consensus        45 --~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  115 (272)
T cd05075          45 --EDFLSEAVCMKEFD-----HPN--VMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLV  115 (272)
T ss_pred             --HHHHHHHHHHHhCC-----CCC--cceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHH
Confidence              12334555444431     121  111111        111245899999999999988642110       011112


Q ss_pred             HHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          435 ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      .++..++.+ +..+|..|++|+|+||.||+++       .++      .++|+|||++..+.........    ......
T Consensus       116 ~~~~~i~~~-l~~lH~~~i~H~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~----~~~~~~  177 (272)
T cd05075         116 KFMTDIASG-MEYLSSKSFIHRDLAARNCMLN-------ENM------NVCVADFGLSKKIYNGDYYRQG----RIAKMP  177 (272)
T ss_pred             HHHHHHHHH-HHHHHHCCeeccccchhheEEc-------CCC------CEEECCCCcccccCcccceecC----CcccCC
Confidence            233333333 7889999999999999999998       666      8999999998876432210000    000011


Q ss_pred             -HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          515 -GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       515 -~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       .+.+.+.+.. .......|.|+|+..+.+++.
T Consensus       178 ~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~  209 (272)
T cd05075         178 VKWIAIESLAD-RVYTTKSDVWSFGVTMWEIAT  209 (272)
T ss_pred             cccCCHHHccC-CCcChHHHHHHHHHHHHHHHc
Confidence             1222333222 223345677777777777765

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.37  E-value=4.9e-12  Score=126.89  Aligned_cols=184  Identities=19%  Similarity=0.177  Sum_probs=113.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||.|....        +..||||...++-..                                      
T Consensus         9 ~~~lg~G~~~~vy~~~~~~--------~~~~aik~~~~~~~~--------------------------------------   42 (256)
T cd05113           9 LKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMS--------------------------------------   42 (256)
T ss_pred             eeEecCcccceEEEEEecC--------CCcEEEEEcCCCccc--------------------------------------
Confidence            3679999999999998754        367999976543100                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        +-+|.+|...+.++.     +++  +++.+.  ......+++|||++|.+|.+++.....  .......++..++.+ 
T Consensus        43 --~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~-  112 (256)
T cd05113          43 --EDEFIEEAKVMMKLS-----HEK--LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEG-  112 (256)
T ss_pred             --HHHHHHHHHHHhcCC-----CCC--eeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH-
Confidence              112334444443331     222  223322  122345899999999999998864222  111123344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||+||+++       .++      .++|+|||++..+.+..-......    .....+...|.+..
T Consensus       113 l~~lH~~~i~H~dl~p~nili~-------~~~------~~kl~d~g~~~~~~~~~~~~~~~~----~~~~~y~~pe~~~~  175 (256)
T cd05113         113 MAYLESKQFIHRDLAARNCLVD-------DQG------CVKVSDFGLSRYVLDDEYTSSVGS----KFPVRWSPPEVLLY  175 (256)
T ss_pred             HHHHHhCCeeccccCcceEEEc-------CCC------CEEECCCccceecCCCceeecCCC----ccChhhCCHHHHhc
Confidence            6789999999999999999998       666      899999999876533211000000    00012344554432


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       +......|.++|+..+.+++.
T Consensus       176 -~~~~~~~Di~slG~~l~~l~~  196 (256)
T cd05113         176 -SKFSSKSDVWAFGVLMWEVYS  196 (256)
T ss_pred             -CcccchhHHHHHHHHHHHHhc
Confidence             334456789999988888875

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.37  E-value=2.8e-12  Score=129.10  Aligned_cols=183  Identities=17%  Similarity=0.181  Sum_probs=112.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|++..        +..||||+.++....                                      
T Consensus        11 ~~~lg~g~~~~v~~~~~~~--------~~~valK~~~~~~~~--------------------------------------   44 (262)
T cd05071          11 EVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMS--------------------------------------   44 (262)
T ss_pred             eeecCCCCCCcEEEEEecC--------CceEEEEecccCccC--------------------------------------
Confidence            4579999999999998864        357999986643110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~  444 (581)
                        +-+|.+|...+.++.     ++++  .+.+.. .....++||||++|++|.+++......   ......++..++++ 
T Consensus        45 --~~~~~~E~~~l~~l~-----~~~i--~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a-  114 (262)
T cd05071          45 --PEAFLQEAQVMKKLR-----HEKL--VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-  114 (262)
T ss_pred             --HHHHHHHHHHHHhCC-----CCCc--ceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHH-
Confidence              012344555554432     1222  111111 123457999999999999998642111   11123344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc-HHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD-GRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D-~~~~~e~ll  523 (581)
                      +..+|..|++|+|++|+||+++       .++      .++|+|||.+..++........     -..+. .+.+.|.+.
T Consensus       115 L~~lH~~~i~H~dl~p~Nill~-------~~~------~~~L~dfg~~~~~~~~~~~~~~-----~~~~~~~y~~PE~~~  176 (262)
T cd05071         115 MAYVERMNYVHRDLRAANILVG-------ENL------VCKVADFGLARLIEDNEYTARQ-----GAKFPIKWTAPEAAL  176 (262)
T ss_pred             HHHHHHCCccccccCcccEEEc-------CCC------cEEeccCCceeecccccccccc-----CCcccceecCHhHhc
Confidence            6779999999999999999998       666      8999999998876543311100     00011 134455432


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       -+......|.++|+..+.++++
T Consensus       177 -~~~~~~~~DvwslG~~l~ellt  198 (262)
T cd05071         177 -YGRFTIKSDVWSFGILLTELTT  198 (262)
T ss_pred             -cCCCCchhhHHHHHHHHHHHHc
Confidence             2334456688888888888776

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.37  E-value=5.5e-12  Score=128.02  Aligned_cols=186  Identities=17%  Similarity=0.166  Sum_probs=112.6

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||.|++|.||+|....+       +..|++|.........                             .        
T Consensus        11 ~~lg~g~~g~v~~~~~~~~-------~~~~~~k~~~~~~~~~-----------------------------~--------   46 (282)
T cd06643          11 GELGDGAFGKVYKAQNKET-------GVLAAAKVIDTKSEEE-----------------------------L--------   46 (282)
T ss_pred             hhcccCCCeEEEEEEECCC-------CeEEEEEEeCCCCHHH-----------------------------H--------
Confidence            5699999999999999764       6899999865431110                             0        


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                        -++.+|...+..+     +++++  ++.+  .......++||||++|.++.+++.....  .......++..++.+ +
T Consensus        47 --~~~~~e~~~l~~l-----~h~~i--i~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~-L  116 (282)
T cd06643          47 --EDYMVEIDILASC-----DHPNI--VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEA-L  116 (282)
T ss_pred             --HHHHHHHHHHHHC-----CCCCe--eeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH-H
Confidence              1223344333322     12222  1222  1123455899999999999887643211  112223344444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh-
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR-  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~-  524 (581)
                      ..+|..|++|+|++|.||+++       .++      +++++|||++..........     ........+.++|.+.. 
T Consensus       117 ~~LH~~~i~H~dlkp~nili~-------~~~------~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~  178 (282)
T cd06643         117 NYLHENKIIHRDLKAGNILFT-------LDG------DIKLADFGVSAKNTRTIQRR-----DSFIGTPYWMAPEVVMCE  178 (282)
T ss_pred             HHHHHCCeeecCCCcccEEEc-------cCC------CEEEcccccccccccccccc-----ccccccccccCHhhcccc
Confidence            889999999999999999998       666      89999999987654321110     00111223445555431 


Q ss_pred             ---hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 ---LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 ---l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                         ........|.++|+..+.+++.+
T Consensus       179 ~~~~~~~~~~~Dv~slGvil~el~~g  204 (282)
T cd06643         179 TSKDRPYDYKADVWSLGITLIEMAQI  204 (282)
T ss_pred             CCCCCCCCccchhhhHHHHHHHHccC
Confidence               12223456888888888887765

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.37  E-value=4.8e-12  Score=128.22  Aligned_cols=192  Identities=18%  Similarity=0.128  Sum_probs=109.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  |+. ...+||||+.........                                    
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~--~~~-~~~~va~K~~~~~~~~~~------------------------------------   52 (279)
T cd05109          12 VKVLGSGAFGTVYKGIWIPD--GEN-VKIPVAIKVLRENTSPKA------------------------------------   52 (279)
T ss_pred             eeecCCCCCceEEEEEEecC--CCc-cceEEEEEEecCCCCHHH------------------------------------
Confidence            47899999999999997653  210 123589998654321110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc-cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY-PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~-~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                        +-++.+|...+.++.     ++++  ++.+. .......++|||++|+++.+++.....  .......++..++.+ +
T Consensus        53 --~~~~~~e~~~l~~~~-----~~~i--~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~-L  122 (279)
T cd05109          53 --NKEILDEAYVMAGVG-----SPYV--CRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKG-M  122 (279)
T ss_pred             --HHHHHHHHHHHHhcC-----CCCC--ceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHH-H
Confidence              112333443333221     2222  22211 112345699999999999998864222  111222334444433 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||+||++.       .++      +++|+|||++..++.........   .-...-.+.+.|.+.. 
T Consensus       123 ~~lH~~~iiH~dlkp~Nil~~-------~~~------~~kL~dfG~~~~~~~~~~~~~~~---~~~~~~~y~~PE~~~~-  185 (279)
T cd05109         123 SYLEEVRLVHRDLAARNVLVK-------SPN------HVKITDFGLARLLDIDETEYHAD---GGKVPIKWMALESILH-  185 (279)
T ss_pred             HHHHHCCeeccccccceEEEc-------CCC------cEEECCCCceeecccccceeecC---CCccchhhCCHHHhcc-
Confidence            789999999999999999998       566      89999999988765322110000   0000001233443322 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +......|.++|+..+.+++.
T Consensus       186 ~~~~~~~Di~slG~~l~el~t  206 (279)
T cd05109         186 RRFTHQSDVWSYGVTVWELMT  206 (279)
T ss_pred             CCCCchhHHHHHHHHHHHHHc
Confidence            223345577777777777654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.37  E-value=2.3e-12  Score=132.59  Aligned_cols=188  Identities=16%  Similarity=0.105  Sum_probs=115.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+...+       |+.|+||...-.....                             .       
T Consensus        24 ~~~lg~g~~g~vy~~~~~~~-------~~~v~iK~~~~~~~~~-----------------------------~-------   60 (296)
T cd06655          24 YEKIGQGASGTVFTAIDVAT-------GQEVAIKQINLQKQPK-----------------------------K-------   60 (296)
T ss_pred             EEEEecCCCeEEEEEEEcCC-------CcEEEEEEEecccCch-----------------------------H-------
Confidence            46799999999999998764       6999999753211000                             0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                         -.+.+|...+..+     .++++.-+..+.......++||||++|.+|.+++............+...++.+ +..+
T Consensus        61 ---~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~a-l~~L  131 (296)
T cd06655          61 ---ELIINEILVMKEL-----KNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQA-LEFL  131 (296)
T ss_pred             ---HHHHHHHHHHHhc-----CCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHH-HHHH
Confidence               0122333333322     122222111111122345799999999999998765322222223344444443 6788


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|++|.||+++       .+|      .++|+|||++..+.+.....-     .......+.+.|.+.. ...
T Consensus       132 H~~~i~H~dL~p~Nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~-~~~  192 (296)
T cd06655         132 HANQVIHRDIKSDNVLLG-------MDG------SVKLTDFGFCAQITPEQSKRS-----TMVGTPYWMAPEVVTR-KAY  192 (296)
T ss_pred             HHCCcccCCCCHHHEEEC-------CCC------CEEEccCccchhcccccccCC-----CcCCCccccCcchhcC-CCC
Confidence            999999999999999998       667      899999999887655432110     0011123344444322 333


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.++|+..+.+++.+
T Consensus       193 ~~~~Dv~slGvil~~lltg  211 (296)
T cd06655         193 GPKVDIWSLGIMAIEMVEG  211 (296)
T ss_pred             CchhhHHHHHHHHHHHHhC
Confidence            4467889999888888876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.37  E-value=4.9e-12  Score=128.94  Aligned_cols=187  Identities=20%  Similarity=0.140  Sum_probs=113.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+..+.-..                           +          
T Consensus        27 ~~~l~~g~~~~vy~~~~~~~-------~~~~aik~~~~~~~~---------------------------~----------   62 (291)
T cd06639          27 IETIGKGTYGKVYKVTNKKD-------GSLAAVKILDPISDV---------------------------D----------   62 (291)
T ss_pred             EEEeecCCCeEEEEEEECCC-------CCEEEEEEecccccH---------------------------H----------
Confidence            46899999999999999764       699999987543100                           0          


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-------CCCCcEEEEeccCCccHHHHHHhhh--c---chhhHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-------LVHPAVLVETYEQGECVSRYVDELQ--G---HERLKSAL  436 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-------l~t~~VLVmEyi~G~~L~~~l~~~~--~---~~~~~~~l  436 (581)
                         -++.+|...+.++.    +++++  ++.+.-       .....++||||++|.+|.++++...  .   .......+
T Consensus        63 ---~~~~~e~~~l~~l~----~h~ni--~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~  133 (291)
T cd06639          63 ---EEIEAEYNILQSLP----NHPNV--VKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYI  133 (291)
T ss_pred             ---HHHHHHHHHHHHhc----CCCCe--EEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHH
Confidence               01122333333321    12222  111110       1134689999999999999875321  1   11111223


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +..++.+ ++.+|..|++|+|++|+||+++       .++      .++|+|||++..+.......-     .......+
T Consensus       134 ~~qi~~a-l~~lH~~~ivH~dlkp~nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~-----~~~~~~~y  194 (291)
T cd06639         134 LYGALLG-LQHLHNNRIIHRDVKGNNILLT-------TEG------GVKLVDFGVSAQLTSTRLRRN-----TSVGTPFW  194 (291)
T ss_pred             HHHHHHH-HHHHHhCCeeccCCCHHHEEEc-------CCC------CEEEeecccchhccccccccc-----CccCCccc
Confidence            3333333 7889999999999999999998       666      899999999876654321110     00112234


Q ss_pred             HHHHHHHhhc----CCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLRLS----KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~l~----~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++|.+....    ......|.+.|+..+.+++++
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g  229 (291)
T cd06639         195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG  229 (291)
T ss_pred             cChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence            4555543211    123457889998888888766

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.37  E-value=7.5e-12  Score=125.11  Aligned_cols=187  Identities=18%  Similarity=0.189  Sum_probs=115.4

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      -||.|++|+||+|+...+ +|   .+..||+|+.+.....                                      ..
T Consensus         2 ~ig~G~~g~v~~~~~~~~-~~---~~~~~~iK~~~~~~~~--------------------------------------~~   39 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMK-SG---KEVEVAVKTLKQEHIA--------------------------------------AG   39 (257)
T ss_pred             ccCccCceeEEEeEeecc-CC---CcceEEEEecccccch--------------------------------------HH
Confidence            489999999999987653 11   2478999987654211                                      01


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCcccccccc-cCCCCcEEEEeccCCccHHHHHHhhh-cchhhHHHHHHHHHHHHHHHh
Q 008021          371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVY-PLVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       371 ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~-~l~t~~VLVmEyi~G~~L~~~l~~~~-~~~~~~~~la~~~i~a~l~~L  448 (581)
                      +-++.+|...+.++     ++++  +.+.+. ......+++|||++|.+|.+++.... ........++..++.+ +..|
T Consensus        40 ~~~~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~-l~~l  111 (257)
T cd05060          40 KKEFLREASVMAQL-----DHPC--IVRLIGVCKGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMG-MAYL  111 (257)
T ss_pred             HHHHHHHHHHHHhc-----CCCC--eeeEEEEEcCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHH-HHHH
Confidence            11233344444332     1222  112221 12334589999999999999986532 1112223344444444 6788


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh---cHHHHHHHHHhh
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR---DGRTAAECTLRL  525 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~---D~~~~~e~ll~l  525 (581)
                      |..|++|+|++|.||+++       .++      .++|+|||++..+.......     .+....   ..+.++|.+ ..
T Consensus       112 h~~~i~H~di~p~nili~-------~~~------~~kl~df~~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~-~~  172 (257)
T cd05060         112 ESKHFVHRDLAARNVLLV-------NRH------QAKISDFGMSRALGAGSDYY-----RATTAGRWPLKWYAPECI-NY  172 (257)
T ss_pred             hhcCeeccCcccceEEEc-------CCC------cEEeccccccceeecCCccc-----ccccCccccccccCHHHh-cC
Confidence            999999999999999998       666      89999999988764432211     000010   124455544 33


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +......|.++|+..+.+++.
T Consensus       173 ~~~~~~~Di~slG~~l~~~~~  193 (257)
T cd05060         173 GKFSSKSDVWSYGVTLWEAFS  193 (257)
T ss_pred             CCCCccchHHHHHHHHHHHHc
Confidence            445556799999888888875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.37  E-value=3.2e-12  Score=127.99  Aligned_cols=184  Identities=14%  Similarity=0.145  Sum_probs=113.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|..++        ++.||||+...+...                                      
T Consensus        11 ~~~ig~G~~g~v~~~~~~~--------~~~~a~K~~~~~~~~--------------------------------------   44 (260)
T cd05067          11 VKKLGAGQFGEVWMGYYNG--------HTKVAIKSLKQGSMS--------------------------------------   44 (260)
T ss_pred             eeeeccCccceEEeeecCC--------CceEEEEEecCCCCc--------------------------------------
Confidence            4679999999999999764        589999987654211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhcch---hhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQGHE---RLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~~~---~~~~~la~~~i~a~  444 (581)
                        .-++.+|...+.++.     ++++  ++.+.. .....+++|||++|.+|.+++....+..   .....++..++.+ 
T Consensus        45 --~~~~~~E~~~l~~l~-----h~~i--~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~a-  114 (260)
T cd05067          45 --PEAFLAEANLMKQLQ-----HPRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEG-  114 (260)
T ss_pred             --HHHHHHHHHHHHhcC-----CcCe--eeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH-
Confidence              012334444343331     1221  111111 1234589999999999999875422211   1112233344443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ++.+|..|++|+|++|.||+++       .++      .++|.|||++..+.........    .......+.+.|.+ .
T Consensus       115 l~~LH~~~i~H~dl~p~ni~i~-------~~~------~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~y~~pe~~-~  176 (260)
T cd05067         115 MAFIERKNYIHRDLRAANILVS-------ETL------CCKIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAI-N  176 (260)
T ss_pred             HHHHhcCCeecccccHHhEEEc-------CCC------CEEEccCcceeecCCCCccccc----CCcccccccCHHHh-c
Confidence            7889999999999999999998       666      8999999999876532211000    00001123444543 2


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .+......|.++|+..+.+++.
T Consensus       177 ~~~~~~~~Di~slG~~l~el~~  198 (260)
T cd05067         177 YGTFTIKSDVWSFGILLTEIVT  198 (260)
T ss_pred             cCCcCcccchHHHHHHHHHHHh
Confidence            2334456788898888888876

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.37  E-value=7.5e-12  Score=125.46  Aligned_cols=122  Identities=14%  Similarity=0.066  Sum_probs=77.6

Q ss_pred             cEEEEeccCCccHHHHHHhhhc-------chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccC
Q 008021          407 AVLVETYEQGECVSRYVDELQG-------HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFR  479 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~-------~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~  479 (581)
                      .+++|||++|.+|.+++.....       .......++..++.+ +..+|..|++|+|+||.||+++       .++   
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a-L~~lH~~~i~H~dlkp~Nil~~-------~~~---  150 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG-MEYLSNRNFIHRDLAARNCMLR-------EDM---  150 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHH-HHHHHhCCeeccccchheEEEC-------CCC---
Confidence            4799999999999988743211       001112233444433 7889999999999999999998       666   


Q ss_pred             CCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          480 SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       480 ~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                         +++|+|||++..+.......-....   .....+.+.|.+ .-.......|.++|+..+.+++.
T Consensus       151 ---~~kl~dfg~~~~~~~~~~~~~~~~~---~~~~~~~~pe~~-~~~~~~~~~Dv~SlG~il~el~~  210 (273)
T cd05035         151 ---TVCVADFGLSKKIYSGDYYRQGRIA---KMPVKWIAIESL-ADRVYTSKSDVWAFGVTMWEIAT  210 (273)
T ss_pred             ---eEEECCccceeeccccccccccccc---cCCccccCHhhc-ccCCCCcccchHHHHHHHHHHHh
Confidence               8999999998866433211000000   000112334433 22344456899999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.37  E-value=6e-13  Score=140.77  Aligned_cols=194  Identities=16%  Similarity=0.139  Sum_probs=122.9

Q ss_pred             ChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       279 ~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      +++..|..+  +-||.||||.||||....+       ++.|||||..-+-.+.                           
T Consensus        10 ~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t-------~k~vAiKii~Le~~~d---------------------------   53 (467)
T KOG0201|consen   10 DPELLYTKL--ELIGRGSFGEVYKAIDNKT-------KKVVAIKIIDLEEAED---------------------------   53 (467)
T ss_pred             Ccccccccc--hhccccccceeeeeeeccc-------cceEEEEEechhhcch---------------------------
Confidence            445566655  5699999999999999886       7999999964331111                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHH
Q 008021          359 ESVQQFAVFMMSQVDLAREAA--HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL  436 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~--nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~l  436 (581)
                       .++    -+.+|+.+..+.+  |+.++...+-             ..+.-.++|||+.|+++.+.++.....  ....+
T Consensus        54 -eIe----diqqei~~Ls~~~~~~it~yygsyl-------------~g~~LwiiMey~~gGsv~~lL~~~~~~--~E~~i  113 (467)
T KOG0201|consen   54 -EIE----DIQQEISVLSQCDSPNITEYYGSYL-------------KGTKLWIIMEYCGGGSVLDLLKSGNIL--DEFEI  113 (467)
T ss_pred             -hhH----HHHHHHHHHHhcCcchHHhhhhhee-------------ecccHHHHHHHhcCcchhhhhccCCCC--cccee
Confidence             011    1223333333322  2322222111             123345899999999999987642211  11222


Q ss_pred             HHH--HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          437 AHI--GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       437 a~~--~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      +.+  -+...+..+|.++.+|+|+|+.||++.       .+|      .++|.|||.+.+++....+...      .-+.
T Consensus       114 ~~ilre~l~~l~ylH~~~kiHrDIKaanil~s-------~~g------~vkl~DfgVa~ql~~~~~rr~t------fvGT  174 (467)
T KOG0201|consen  114 AVILREVLKGLDYLHSEKKIHRDIKAANILLS-------ESG------DVKLADFGVAGQLTNTVKRRKT------FVGT  174 (467)
T ss_pred             eeehHHHHHHhhhhhhcceecccccccceeEe-------ccC------cEEEEecceeeeeechhhcccc------cccc
Confidence            211  122348889999999999999999999       667      8999999999999877554311      1233


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++.+|-..+....+....|.|.++-..-+|..+
T Consensus       175 PfwMAPEVI~~~~Y~~KADIWSLGITaiEla~G  207 (467)
T KOG0201|consen  175 PFWMAPEVIKQSGYDTKADIWSLGITAIELAKG  207 (467)
T ss_pred             ccccchhhhccccccchhhhhhhhHHHHHHhcC
Confidence            344443333444566677888888887777766

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.37  E-value=1.2e-12  Score=131.38  Aligned_cols=126  Identities=16%  Similarity=0.196  Sum_probs=82.1

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeeccccccccccc--CC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF--RS  480 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~--~~  480 (581)
                      ...++||||++|.+|.+++.....  .......++..++.+ +..+|..|++|+|++|.||+++.       ++..  ..
T Consensus        72 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~-l~~lH~~~iiH~dlkp~nili~~-------~~~~~~~~  143 (258)
T cd05078          72 DESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWA-LHFLEDKGLTHGNVCAKNVLLIR-------EEDRKTGN  143 (258)
T ss_pred             CCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHH-HHHHHHCCeecCCCccceEEEec-------ccccccCC
Confidence            345799999999999999864322  111222344444444 67889999999999999999982       2200  11


Q ss_pred             CCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          481 KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       481 ~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.++++|||.+....+...         ....-.+.++|.+..........|.|+|+..+.+++.+
T Consensus       144 ~~~~~l~d~g~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g  201 (258)
T cd05078         144 PPFIKLSDPGISITVLPKEI---------LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSG  201 (258)
T ss_pred             CceEEecccccccccCCchh---------ccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcC
Confidence            23689999998876543211         11122355666654433344567999999999988876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.37  E-value=4.4e-12  Score=129.63  Aligned_cols=123  Identities=15%  Similarity=0.057  Sum_probs=78.3

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          406 PAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      .-+|||||++| ++.+++.....  .......++..++.+ +..||..|++|+|++|+||+++       .++      .
T Consensus        90 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~a-L~~LH~~~i~H~dl~p~nili~-------~~~------~  154 (302)
T cd07864          90 AFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEG-LNYCHKKNFLHRDIKCSNILLN-------NKG------Q  154 (302)
T ss_pred             cEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEC-------CCC------c
Confidence            45799999998 55555443211  111223344444444 6789999999999999999998       666      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||.+..+.........    .......+.+.|.+..........|.++|+..+.+++.+
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g  214 (302)
T cd07864         155 IKLADFGLARLYNSEESRPYT----NKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTK  214 (302)
T ss_pred             EEeCcccccccccCCcccccc----cceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence            999999998876543321100    000112244455543322334567999999999998876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.37  E-value=5.5e-12  Score=128.64  Aligned_cols=187  Identities=16%  Similarity=0.139  Sum_probs=116.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|.+..+       ++.||+|+..+....                                      
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~--------------------------------------   40 (287)
T cd06621           6 LSRLGEGAGGSVTKCRLKNT-------GMIFALKTITTDPNP--------------------------------------   40 (287)
T ss_pred             EEEeccCCceEEEEEEECCC-------CeEEEEEEEecCCch--------------------------------------
Confidence            57899999999999999764       699999986543111                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-cccccccC-CCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i  441 (581)
                      ..+-++.+|.+.+.++.     ++++. +...+... ....++||||++|.+|.+++.....     .......++..++
T Consensus        41 ~~~~~~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~  115 (287)
T cd06621          41 DLQKQILRELEINKSCK-----SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVL  115 (287)
T ss_pred             HHHHHHHHHHHHHHhCC-----CCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            01122344554444331     22221 11111111 1235799999999999988653211     1111223444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..+|..|++|+|++|+||+++       .++      .++|+|||++..+.......+       .....+.+.|.
T Consensus       116 ~~-L~~lH~~~i~H~dl~~~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~-------~~~~~y~~pE~  174 (287)
T cd06621         116 KG-LSYLHSRKIIHRDIKPSNILLT-------RKG------QVKLCDFGVSGELVNSLAGTF-------TGTSFYMAPER  174 (287)
T ss_pred             HH-HHHHHHCCcccCCCCHHHEEEe-------cCC------eEEEeeccccccccccccccc-------cCCccccCHHH
Confidence            44 7788999999999999999998       666      899999999876543322111       11223344554


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. .......|.++++..+.+++.+
T Consensus       175 ~~~-~~~~~~~Dv~slG~il~~l~~g  199 (287)
T cd06621         175 IQG-KPYSITSDVWSLGLTLLEVAQN  199 (287)
T ss_pred             hcC-CCCCchhhHHHHHHHHHHHHhC
Confidence            432 3344466888888888888876

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=99.37  E-value=2.9e-11  Score=121.37  Aligned_cols=196  Identities=19%  Similarity=0.192  Sum_probs=127.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      -+|.+|--|.||+|...+        +..|||||.+......-.     ++....--..+-..+. +...++..+     
T Consensus        54 g~istGKEA~Vy~a~~~~--------~~~~avKiyr~~t~~fk~-----~~~Yi~gd~Rf~~~~~-~rr~lv~~W-----  114 (268)
T COG1718          54 GCISTGKEANVYLAETGD--------GRYVAVKIYRTSTSEFKR-----IRRYIQGDPRFRNSRS-NRRKLVFAW-----  114 (268)
T ss_pred             eeecCCcceEEEeeccCC--------CceEEEEEEehhhhhhhh-----HHHHHhcChhhhcCCC-CHHHHHHHH-----
Confidence            389999999999999754        699999999886433222     1111100001111111 333333322     


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCc-----cHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE-----CVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~-----~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                          -+.|-+|+.|..+.     +|.+|+|+  ...++||||||+...     .|.+.    +........+.+..++.+
T Consensus       115 ----~~kEf~NL~R~~eA-----GVrvP~Pi--~~~~nVLvMEfIg~~g~pAP~LkDv----~~e~~e~~~~~~~~v~~~  179 (268)
T COG1718         115 ----ARKEFRNLKRAYEA-----GVRVPEPI--AFRNNVLVMEFIGDDGLPAPRLKDV----PLELEEAEGLYEDVVEYM  179 (268)
T ss_pred             ----HHHHHHHHHHHHHc-----CCCCCCce--eecCCeEEEEeccCCCCCCCCcccC----CcCchhHHHHHHHHHHHH
Confidence                25688899888643     79999999  678899999998544     22221    111112344555666665


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      -.++...|+||+||..-|||+.        +|      .+++||+|.+..++...-..|       +.+|...+..-+-.
T Consensus       180 ~~l~~~a~LVHgDLSEyNiL~~--------~~------~p~iID~~QaV~~~hp~a~e~-------L~RDv~Ni~~fF~r  238 (268)
T COG1718         180 RRLYKEAGLVHGDLSEYNILVH--------DG------EPYIIDVSQAVTIDHPNAFEF-------LERDVRNIARFFRR  238 (268)
T ss_pred             HHHHHhcCcccccchhhheEEE--------CC------eEEEEECccccccCCCchHHH-------HHHHHHHHHHHHHH
Confidence            5566669999999999999998        33      799999999998876655443       47888888877755


Q ss_pred             hcCCCCCCCHHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRL  543 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~  543 (581)
                      .|..   .|++....++..
T Consensus       239 ~gv~---~d~e~~l~~i~~  254 (268)
T COG1718         239 KGVE---ADPEELLEEIKG  254 (268)
T ss_pred             cCCC---CCHHHHHHHHhh
Confidence            5443   366555555443

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.37  E-value=6.5e-12  Score=127.35  Aligned_cols=193  Identities=15%  Similarity=0.106  Sum_probs=114.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+...+.+  ...++.||||+.+.......                                ..  
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~--~~~~~~vaiK~~~~~~~~~~--------------------------------~~--   53 (283)
T cd05091          10 MEELGEDRFGKVYKGHLFGTAP--GEQTQAVAIKTLKDKAEGPL--------------------------------RE--   53 (283)
T ss_pred             HHHhCCCCCCeEEEEEEecCCC--CCceeEEEEEEccCCCCHHH--------------------------------HH--
Confidence            3578999999999999864311  12358899998764321110                                00  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----------------c
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----------------H  429 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~  429 (581)
                          .+.+|...+..+    . ++++  .+.+.  .......+++||++|.+|.+++.....                 .
T Consensus        54 ----~~~~e~~~~~~l----~-h~~i--v~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  122 (283)
T cd05091          54 ----EFKHEAMMRSRL----Q-HPNI--VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE  122 (283)
T ss_pred             ----HHHHHHHHHhcC----C-CCCc--CeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccC
Confidence                122233222211    1 2222  11221  112345789999999999998742110                 0


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA  509 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~A  509 (581)
                      ......++..++.+ +..+|..|++|+|+||.||++.       .++      .++|+|||++..+.........   ..
T Consensus       123 ~~~~~~~~~ql~~a-L~~lH~~gi~H~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~---~~  185 (283)
T cd05091         123 PADFVHIVTQIAAG-MEFLSSHHVVHKDLATRNVLVF-------DKL------NVKISDLGLFREVYAADYYKLM---GN  185 (283)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHcCccccccchhheEec-------CCC------ceEecccccccccccchheeec---cC
Confidence            01112234444444 7889999999999999999998       666      8999999998876543221100   00


Q ss_pred             HHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       510 l~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ....-.+.+.|.+.. +......|.++|+..+.+++.
T Consensus       186 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~  221 (283)
T cd05091         186 SLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFS  221 (283)
T ss_pred             ccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHc
Confidence            001113556666543 444556799999999999886

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PRK10345 hypothetical protein; Provisional

Probab=99.37  E-value=8.2e-12  Score=123.86  Aligned_cols=145  Identities=11%  Similarity=0.172  Sum_probs=87.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|+++.||.  +..+       +.. +||+.+++-..                                      
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~-------~~k-~IKv~~~~~~~--------------------------------------   38 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPED-------AQR-CIKIVYHRGDG--------------------------------------   38 (210)
T ss_pred             cceecCCCceEEEE--CCCC-------cCe-EEEEEeccccc--------------------------------------
Confidence            68999999999995  4332       344 69998764110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCc---E---EEEec--cCCccHHHHHHhhhcchhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA---V---LVETY--EQGECVSRYVDELQGHERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~---V---LVmEy--i~G~~L~~~l~~~~~~~~~~~~la~~~  440 (581)
                       .+-++++|.+.+..+...-.+++  .+++.|..+.+..   .   +||||  ++|.+|.++++... . ..........
T Consensus        39 -~~~~~~rEi~~l~~L~~~~~~h~--nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~-~-~e~~~~~~~~  113 (210)
T PRK10345         39 -GDKEIRRELKYYAHLSRRLIDWS--GIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR-Y-EEDVAQLRQL  113 (210)
T ss_pred             -hHHHHHHHHHHHHHhhccCCCCc--ccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHccc-c-cHhHHHHHHH
Confidence             00112344444444422111222  3555554444432   2   68999  55799999986521 1 1112233445


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      +..+.+.+|.+|++|+|+||+|||++...+   .      ..+++|+|||-...+
T Consensus       114 L~~l~~yLh~~~IvhrDlKp~NILl~~~~~---~------~~~~~LiDg~G~~~~  159 (210)
T PRK10345        114 LKKLKRYLLDNRIVTMELKPQNILCQRISE---S------EVIPVVCDNIGESTF  159 (210)
T ss_pred             HHHHHHHHHHCCEeecCCCHHHEEEeccCC---C------CCcEEEEECCCCcce
Confidence            556678999999999999999999982111   1      238999994444443

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.37  E-value=6.3e-12  Score=126.69  Aligned_cols=187  Identities=16%  Similarity=0.112  Sum_probs=115.8

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|....+       |+.|++|.........                               ..     
T Consensus         5 ~~i~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~-------------------------------~~-----   41 (283)
T cd05118           5 GKIGEGTYGVVYKARDKLT-------GEIVAIKKIKLRFESE-------------------------------GI-----   41 (283)
T ss_pred             eeeecCCCceEEEEEcCCC-------CcEEEEEEeccccccc-------------------------------hh-----
Confidence            5799999999999998754       7999999876542210                               00     


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                       +-++.+|...+.++.     ++++  .+.+  .......+++|||++| ++.+++.....  .......++..++++ +
T Consensus        42 -~~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~-l  111 (283)
T cd05118          42 -PKTALREIKLLKELN-----HPNI--IKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQG-L  111 (283)
T ss_pred             -HHHHHHHHHHHHHhc-----CCCc--chHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHH-H
Confidence             011222332332221     1111  1111  1112445799999987 67776644211  112223455555554 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||.||+++       .++      .++|+|||.+..+.......     ........+.++|.+...
T Consensus       112 ~~LH~~~i~H~dl~p~nili~-------~~~------~~~l~df~~~~~~~~~~~~~-----~~~~~~~~~~~PE~~~~~  173 (283)
T cd05118         112 AFCHSHGILHRDLKPENLLIN-------TEG------VLKLADFGLARSFGSPVRPY-----THYVVTRWYRAPELLLGD  173 (283)
T ss_pred             HHHHHCCeeecCcCHHHEEEC-------CCC------cEEEeeeeeeEecCCCcccc-----cCccCcccccCcHHHhcC
Confidence            889999999999999999998       666      89999999988776554111     001122234556665443


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++++..+.+++++
T Consensus       174 ~~~~~~~Di~slG~~l~~l~tg  195 (283)
T cd05118         174 KGYSTPVDIWSVGCIFAELLSR  195 (283)
T ss_pred             CCCCchhHHHHHHHHHHHHHhC
Confidence            2344567999999999999887

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.36  E-value=2.4e-12  Score=128.77  Aligned_cols=184  Identities=20%  Similarity=0.204  Sum_probs=112.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|..+.        +..+|||+..++...                                      
T Consensus         9 ~~~lg~G~~~~v~~~~~~~--------~~~~~iK~~~~~~~~--------------------------------------   42 (256)
T cd05059           9 LKELGSGQFGVVHLGKWRG--------KIDVAIKMIREGAMS--------------------------------------   42 (256)
T ss_pred             hhhhccCCCceEEEeEecC--------CccEEEEEeccCCCC--------------------------------------
Confidence            5679999999999998764        478999986543110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                        +-++.+|...+.++.     ++++  ++.+  .......++||||++|.+|.+++......  ......++..++.+ 
T Consensus        43 --~~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~-  112 (256)
T cd05059          43 --EDDFIEEAKVMMKLS-----HPNL--VQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEA-  112 (256)
T ss_pred             --HHHHHHHHHHHHhCC-----CCCE--EEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHH-
Confidence              011223333333221     2222  2222  22334568999999999999988542221  11123344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       .+|      .++|+|||++....+........    ....-.+.+.|.+..
T Consensus       113 l~~lH~~~i~H~dl~p~ni~i~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~----~~~~~~y~~Pe~~~~  175 (256)
T cd05059         113 MEYLESNGFIHRDLAARNCLVG-------EDN------VVKVSDFGLARYVLDDQYTSSQG----TKFPVKWAPPEVFDY  175 (256)
T ss_pred             HHHHHHCCcccccccHhhEEEC-------CCC------cEEECCcccceecccccccccCC----CCCCccccCHHHhcc
Confidence            6789999999999999999998       667      89999999987654321110000    000012344554432


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       .......|.++|+..+.+++.
T Consensus       176 -~~~~~~~Di~slG~il~~l~~  196 (256)
T cd05059         176 -SRFSSKSDVWSFGVLMWEVFS  196 (256)
T ss_pred             -CCCCchhhHHHHHHHHHHHhc
Confidence             334445788888888888775

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.36  E-value=2.7e-12  Score=147.60  Aligned_cols=144  Identities=20%  Similarity=0.216  Sum_probs=93.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|....+       ++.||||+.+..-..  .                        ....    .  
T Consensus         9 ~~~LG~G~fg~Vy~a~~~~~-------~~~vAiKvi~~~~~~--~------------------------~~~~----~--   49 (669)
T cd05610           9 VKPISRGAFGKVYLGRKKNN-------SKLYAVKVVKKADMI--N------------------------KNMV----H--   49 (669)
T ss_pred             EEEEecCCCeEEEEEEECCC-------CcEEEEEEEehhhcc--C------------------------HHHH----H--
Confidence            57899999999999999864       699999997642100  0                        0000    1  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                          .+..|...+..+     .++.+  ++.+.  ......+|||||++|.+|.+++..... .......++..++.+ +
T Consensus        50 ----~~~~E~~~l~~l-----~hp~I--v~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~a-L  117 (669)
T cd05610          50 ----QVQAERDALALS-----KSPFI--VHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALA-L  117 (669)
T ss_pred             ----HHHHHHHHHHhc-----CCCCc--CeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence                122233333222     12222  22221  223456899999999999998854221 111223344444443 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      ..||..|++|+||||.|||++       .+|      .++|+|||++....
T Consensus       118 ~yLH~~gIiHrDLKP~NILl~-------~~g------~vkL~DFGls~~~~  155 (669)
T cd05610         118 DYLHRHGIIHRDLKPDNMLIS-------NEG------HIKLTDFGLSKVTL  155 (669)
T ss_pred             HHHHhCCEEeCCccHHHEEEc-------CCC------CEEEEeCCCCcccc
Confidence            889999999999999999998       667      89999999988654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.36  E-value=2.7e-12  Score=130.95  Aligned_cols=188  Identities=14%  Similarity=0.083  Sum_probs=116.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+       ++.||||........                               +.+    
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~-------------------------------~~~----   47 (293)
T cd07843          10 LNRIEEGTYGVVYRARDKKT-------GEIVALKKLKMEKEK-------------------------------EGF----   47 (293)
T ss_pred             hhhhcCCCCeEEEEEEECCC-------CcEEEEEEEeecccc-------------------------------ccc----
Confidence            57899999999999999764       689999986543110                               000    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCC--CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLV--HPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~--t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~  442 (581)
                        ..++.+|...+.++.     ++++  +..+.  ...  ...+|||||++| +|.+++.....  .......++..++.
T Consensus        48 --~~~~~~e~~~l~~l~-----h~ni--~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~  117 (293)
T cd07843          48 --PITSLREINILLKLQ-----HPNI--VTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLS  117 (293)
T ss_pred             --hhhHHHHHHHHHhcC-----CCCE--EEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence              011223444443332     2222  22211  111  456899999987 78887754221  11222334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..||..|++|+|++|+||+++       .+|      .++|+|||++..+....... ..    ....-.+.++|.+
T Consensus       118 a-L~~LH~~~i~H~dl~p~nili~-------~~~------~~~l~d~g~~~~~~~~~~~~-~~----~~~~~~~~aPE~~  178 (293)
T cd07843         118 G-VAHLHDNWILHRDLKTSNLLLN-------NRG------ILKICDFGLAREYGSPLKPY-TQ----LVVTLWYRAPELL  178 (293)
T ss_pred             H-HHHHHHCCeeeccCCHHHEEEC-------CCC------cEEEeecCceeeccCCcccc-cc----ccccccccCchhh
Confidence            4 7889999999999999999998       666      89999999988765432111 00    0111234555655


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..........|.++++..+.+++.+
T Consensus       179 ~~~~~~~~~~Di~slG~~l~~l~~g  203 (293)
T cd07843         179 LGAKEYSTAIDMWSVGCIFAELLTK  203 (293)
T ss_pred             cCCccccchhhHHHHHHHHHHHHhC
Confidence            4333334567899999988888876

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.36  E-value=7.7e-12  Score=127.30  Aligned_cols=198  Identities=15%  Similarity=0.039  Sum_probs=112.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+....    ..+++.||||+.+....   ...                                .
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~----~~~~~~~avk~~~~~~~---~~~--------------------------------~   45 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGG----HDAGKLYAMKVLKKATI---VQK--------------------------------A   45 (288)
T ss_pred             EEEeccCCCceEEEEEEecc----ccCCcEEEEEEEehHHH---Hhh--------------------------------h
Confidence            46799999999999987532    11268999998653200   000                                0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                      ...-++.+|...+.++.    +++.+.-...........++||||++|.+|.+++..... .......++..++++ +..
T Consensus        46 ~~~~~~~~E~~~l~~~~----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~-l~~  120 (288)
T cd05583          46 KTAEHTRTERQVLEAVR----RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLA-LDH  120 (288)
T ss_pred             hHHHHHHHHHHHHHhcc----CCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHH-HHH
Confidence            00112233444443332    222221111111222345799999999999988753211 111112233344443 678


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc-
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS-  526 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~-  526 (581)
                      +|..|++|+|+||.||+++       .++      .++|+|||++..+.......  .  ........+.++|.+.... 
T Consensus       121 lH~~~~~H~dl~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~--~--~~~~~~~~y~aPE~~~~~~~  183 (288)
T cd05583         121 LHQLGIIYRDIKLENILLD-------SEG------HVVLTDFGLSKEFLAEEEER--A--YSFCGTIEYMAPEVIRGGSG  183 (288)
T ss_pred             HHHCCeeccCCCHHHeEEC-------CCC------CEEEEECccccccccccccc--c--ccccCCccccCHHHhcCCCC
Confidence            8999999999999999998       666      89999999987654432110  0  0011112334455443321 


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.+.|+..+.+++.+
T Consensus       184 ~~~~~~Dv~slG~il~el~tg  204 (288)
T cd05583         184 GHDKAVDWWSLGVLTFELLTG  204 (288)
T ss_pred             CCcchhhhHHHHHHHHHHHhC
Confidence            123456888888888888765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.36  E-value=7.5e-13  Score=143.15  Aligned_cols=173  Identities=19%  Similarity=0.180  Sum_probs=119.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+=+|||+-|-|++|+++         ++.||||-    |++.-+.|++-|+.+-+                        
T Consensus       129 LeWlGSGaQGAVF~Grl~---------netVAVKK----V~elkETdIKHLRkLkH------------------------  171 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH---------NETVAVKK----VRELKETDIKHLRKLKH------------------------  171 (904)
T ss_pred             hhhhccCcccceeeeecc---------CceehhHH----HhhhhhhhHHHHHhccC------------------------
Confidence            456899999999999997         48999993    44444555554443210                        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCC---cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHH--HHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP---AVLVETYEQGECVSRYVDELQGHERLKSALAHIG--THA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~---~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~--i~a  443 (581)
                                .|+..|       ++         .|+.   -+++||||.-+.|.++++.  +....+..++...  +..
T Consensus       172 ----------~NII~F-------kG---------VCtqsPcyCIiMEfCa~GqL~~VLka--~~~itp~llv~Wsk~IA~  223 (904)
T KOG4721|consen  172 ----------PNIITF-------KG---------VCTQSPCYCIIMEFCAQGQLYEVLKA--GRPITPSLLVDWSKGIAG  223 (904)
T ss_pred             ----------cceeeE-------ee---------eecCCceeEEeeeccccccHHHHHhc--cCccCHHHHHHHHHHhhh
Confidence                      022111       11         2322   2699999999999999865  2223334444433  223


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh-hHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT-DRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~-~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      -++.||.+.|||||||.-||||.       .+.      .|+|.|||-.+++++. ....|+        +...-+|-.+
T Consensus       224 GM~YLH~hKIIHRDLKSPNiLIs-------~~d------~VKIsDFGTS~e~~~~STkMSFa--------GTVaWMAPEv  282 (904)
T KOG4721|consen  224 GMNYLHLHKIIHRDLKSPNILIS-------YDD------VVKISDFGTSKELSDKSTKMSFA--------GTVAWMAPEV  282 (904)
T ss_pred             hhHHHHHhhHhhhccCCCceEee-------ccc------eEEeccccchHhhhhhhhhhhhh--------hhHhhhCHHH
Confidence            47789999999999999999999       444      7999999999988765 334444        3334555555


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++--...+.+|.|.|.-.|.|++++
T Consensus       283 IrnePcsEKVDIwSfGVVLWEmLT~  307 (904)
T KOG4721|consen  283 IRNEPCSEKVDIWSFGVVLWEMLTG  307 (904)
T ss_pred             hhcCCcccccceehhHHHHHHHHhc
Confidence            5555566678999999999999987

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.36  E-value=1.1e-11  Score=125.22  Aligned_cols=187  Identities=16%  Similarity=0.111  Sum_probs=109.9

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||.|++|.||+|++..+  |   ....|++|..+......                                      
T Consensus         1 ~~lg~g~~g~v~~~~~~~~--~---~~~~~~~k~~~~~~~~~--------------------------------------   37 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKD--G---LRMDAAIKRMKEYASKD--------------------------------------   37 (270)
T ss_pred             CcCCCCCCceEEEEEEcCC--C---CeeEEEEEEccccCCHH--------------------------------------
Confidence            3689999999999999764  2   11357888755321110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----------------ch
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----------------HE  430 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~~  430 (581)
                      .+-++.+|...+.++.    .++++  .+.+.  ......++||||++|.+|.+++.....                 ..
T Consensus        38 ~~~~~~~E~~~l~~l~----~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~  111 (270)
T cd05047          38 DHRDFAGELEVLCKLG----HHPNI--INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS  111 (270)
T ss_pred             HHHHHHHHHHHHHhhc----cCCCe--eeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCH
Confidence            0112344555554442    22222  12221  122345799999999999998854210                 01


Q ss_pred             hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          431 RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       431 ~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      .....++..++.+ ++.+|..|++|+|++|.||+++       .++      .++++|||++............      
T Consensus       112 ~~~~~~~~~i~~a-l~~lH~~~i~H~dikp~nili~-------~~~------~~kl~dfgl~~~~~~~~~~~~~------  171 (270)
T cd05047         112 QQLLHFAADVARG-MDYLSQKQFIHRDLAARNILVG-------ENY------VAKIADFGLSRGQEVYVKKTMG------  171 (270)
T ss_pred             HHHHHHHHHHHHH-HHHHHHCCEeecccccceEEEc-------CCC------eEEECCCCCccccchhhhccCC------
Confidence            1112233333333 7889999999999999999998       666      8999999987543221111100      


Q ss_pred             HhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       511 ~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ...-.+.+.|.+. ........|.++|+..+.++++
T Consensus       172 ~~~~~y~apE~~~-~~~~~~~~Di~slG~il~el~~  206 (270)
T cd05047         172 RLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVS  206 (270)
T ss_pred             CCccccCChHHHc-cCCCCchhhHHHHHHHHHHHHc
Confidence            0001244455442 2334456788898888888874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.36  E-value=5.8e-12  Score=126.09  Aligned_cols=185  Identities=15%  Similarity=0.070  Sum_probs=114.0

Q ss_pred             ecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHH
Q 008021          292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ  371 (581)
Q Consensus       292 IgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~E  371 (581)
                      ||.|++|.||+|+...+       ++.||||+..+.....                              .      ..+
T Consensus         1 lg~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~~------------------------------~------~~~   37 (262)
T cd05572           1 LGVGGFGRVELVKVKSK-------NRTFALKCVKKRHIVE------------------------------T------GQQ   37 (262)
T ss_pred             CCCCCceEEEEEEECCC-------CcEEEEEEEehhcchh------------------------------h------hHH
Confidence            68999999999999764       6899999876431100                              0      011


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHh
Q 008021          372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKML  448 (581)
Q Consensus       372 lDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L  448 (581)
                      -.+.+|...+.++.     +++  +++.+..  .....+++|||.+|.+|.+++..... .......++..++.+ +..+
T Consensus        38 ~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~-l~~l  109 (262)
T cd05572          38 EHIFSEKEILEECN-----HPF--IVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLA-FEYL  109 (262)
T ss_pred             HHHHHHHHHHHhCC-----CCC--EeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHH-HHHH
Confidence            12344444333321     222  2222221  22345799999999999998864221 111122233334433 7889


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++|+|++|.||+++       .++      .++|+|||.+..+.......      .......+..+|.+.. ...
T Consensus       110 H~~~~~h~dl~~~nilv~-------~~~------~~~l~df~~~~~~~~~~~~~------~~~~~~~~~~PE~~~~-~~~  169 (262)
T cd05572         110 HNRGIIYRDLKPENLLLD-------SNG------YVKLVDFGFAKKLKSGQKTW------TFCGTPEYVAPEIILN-KGY  169 (262)
T ss_pred             hhCCcccCCCCHHHEEEc-------CCC------CEEEeeCCcccccCcccccc------cccCCcCccChhHhcC-CCC
Confidence            999999999999999998       667      89999999998876543111      0111223445554332 233


Q ss_pred             CCCCCHHHHHHHHHHhhhH
Q 008021          529 QNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       529 ~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....|.++|+..+.+++.+
T Consensus       170 ~~~~Di~slG~il~~l~~g  188 (262)
T cd05572         170 DFSVDYWSLGILLYELLTG  188 (262)
T ss_pred             CChhhhhhhHHHHHHHHhC
Confidence            3456888888888877765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.36  E-value=3.4e-12  Score=144.55  Aligned_cols=197  Identities=16%  Similarity=0.077  Sum_probs=114.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ++-||+|+||+||.|.+...       |.+||+|.+.-.       |-.-+                          ..+
T Consensus        42 ~~vLAEGGFa~VYla~~~~~-------~~~~AlKrm~~~-------de~~L--------------------------~~v   81 (738)
T KOG1989|consen   42 EKVLAEGGFAQVYLAQDVKG-------GKKYALKRMYVN-------DEEAL--------------------------NAV   81 (738)
T ss_pred             EEEEccCCcEEEEEEEecCC-------CceeeeeeeecC-------CHHHH--------------------------HHH
Confidence            57899999999999999762       599999975533       11111                          123


Q ss_pred             HHHHHHHHHHH---HHHHHHHhcc--cCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAA---HLSRFIYNFR--RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~---nl~rf~~~f~--~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a  443 (581)
                      .+|+|+....+   |+..|.+...  ...+..+        -+-.|.||||.|+.|-|++...........++.+++.+.
T Consensus        82 ~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~--------~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv  153 (738)
T KOG1989|consen   82 KREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV--------WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDV  153 (738)
T ss_pred             HHHHHHHHHhcCCCceeeEeccccccccCCCce--------eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHH
Confidence            45555555433   2222221000  0000000        012479999999999999864322222223344433322


Q ss_pred             --HHHHhhhCC--eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC--HhhHH--HHHHHHHHHHhhcH
Q 008021          444 --LLKMLLVDN--FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS--KTDRV--NLVEFFKAVARRDG  515 (581)
Q Consensus       444 --~l~~L~~~G--~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~--~~~r~--~l~~l~~Al~~~D~  515 (581)
                        .+..||...  +||||||-+|||+.       .+|      +.||||||.++...  ++...  ++++==..-...--
T Consensus       154 ~~AVa~mH~~~pPiIHRDLKiENvLls-------~~g------~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~  220 (738)
T KOG1989|consen  154 CEAVAAMHYLKPPIIHRDLKIENVLLS-------ADG------NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQ  220 (738)
T ss_pred             HHHHHHHhcCCCccchhhhhhhheEEc-------CCC------CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCcc
Confidence              256678766  99999999999999       777      99999999988542  22222  22111111112224


Q ss_pred             HHHHHHHHhhcC--CCCCCCHHHHHHHHHHhhh
Q 008021          516 RTAAECTLRLSK--QQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       516 ~~~~e~ll~l~~--~~~~~D~~~f~~~l~~l~~  546 (581)
                      |++.|.+=-.+.  ..+..|.|++++-|..|.-
T Consensus       221 YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy  253 (738)
T KOG1989|consen  221 YRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCY  253 (738)
T ss_pred             ccChHHHhhhcCCCCcchhHHHHHHHHHHHHHH
Confidence            566665522222  2246799999999999853

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.36  E-value=7.2e-12  Score=121.10  Aligned_cols=189  Identities=22%  Similarity=0.178  Sum_probs=118.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|+||+|+...+       ++.|+||+.+.....                                      
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~--------------------------------------   38 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGT-------GELVAVKVLKKEKTE--------------------------------------   38 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCC-------CcEEEEEeeccccch--------------------------------------
Confidence            47899999999999999764       689999997765221                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                      ...-++.+|...+.++     ..++  +++.+  .......++++||++|.+|.+++.....  .......++..++.. 
T Consensus        39 ~~~~~~~~e~~~~~~~-----~~~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~-  110 (225)
T smart00221       39 KQREEFLREIRILKKL-----KHPN--IVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEA-  110 (225)
T ss_pred             HHHHHHHHHHHHHHhC-----CCCC--hhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHH-
Confidence            0011234454444443     1122  22222  1223566899999999999999865322  111222333333333 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|++|.||+++       .++      .++|+|||.+..+....-...    ......+.+...+.+..
T Consensus       111 l~~lh~~~i~h~di~~~ni~v~-------~~~------~~~l~d~g~~~~~~~~~~~~~----~~~~~~~~~~~pe~~~~  173 (225)
T smart00221      111 LEYLHSLGIVHRDLKPENILLG-------MDG------LVKLADFGLARFIHRDLAALL----KTVKGTPFYLAPEVLLG  173 (225)
T ss_pred             HHHHHhCCeecCCCCHHHEEEc-------CCC------CEEEeeCceeeEecCcccccc----cceeccCCcCCHhHhcC
Confidence            6778999999999999999998       555      899999999887755420000    00011222334444322


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ........|.+.|...+.+++.+
T Consensus       174 ~~~~~~~~Dv~~lG~~~~~l~~g  196 (225)
T smart00221      174 GKGYGEAVDIWSLGVILYELLWG  196 (225)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHC
Confidence            23333467999999988888875

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=4.3e-12  Score=127.50  Aligned_cols=194  Identities=12%  Similarity=0.030  Sum_probs=118.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|++..+       |+.||+|+...+......                        .+         
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~-------~~~~~ik~~~~~~~~~~~------------------------~~---------   46 (264)
T cd06653           7 GKLLGRGAFGEVYLCYDADT-------GRELAVKQVPFDPDSQET------------------------SK---------   46 (264)
T ss_pred             eeeEccCCCeEEEEEEEcCC-------CCEEEEEEEecCcccchh------------------------hH---------
Confidence            57899999999999998765       699999986543111000                        00         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a  443 (581)
                       ..-++.+|...+.++.     +++  +.+.+..+    ....+++|||++|.+|.+++..... .......++..++.+
T Consensus        47 -~~~~~~~ei~~l~~l~-----h~~--i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~a  118 (264)
T cd06653          47 -EVNALECEIQLLKNLR-----HDR--IVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQG  118 (264)
T ss_pred             -HHHHHHHHHHHHHHcC-----CCC--cceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence             0113345555444432     222  22222111    1234789999999999998754221 112223344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|+||+++       .++      .++|.|||++..+.........  .........+.+.|.+.
T Consensus       119 -l~~LH~~~i~H~dl~p~ni~i~-------~~~------~~~l~dfg~~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~  182 (264)
T cd06653         119 -VSYLHSNMIVHRDIKGANILRD-------SAG------NVKLGDFGASKRIQTICMSGTG--IKSVTGTPYWMSPEVIS  182 (264)
T ss_pred             -HHHHHhCCEecCCCCHHHEEEc-------CCC------CEEECccccccccccccccCcc--ccccCCcccccCHhhhc
Confidence             6789999999999999999998       666      8999999998866421100000  00111223345556553


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . .......|.++|+..+.+++.+
T Consensus       183 ~-~~~~~~~Di~slG~il~~l~~g  205 (264)
T cd06653         183 G-EGYGRKADVWSVACTVVEMLTE  205 (264)
T ss_pred             C-CCCCccccHHHHHHHHHHHHhC
Confidence            3 2334467999999999998876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.36  E-value=5.1e-12  Score=124.45  Aligned_cols=190  Identities=17%  Similarity=0.122  Sum_probs=117.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||.|++|.||+|+...+       |+.|+||+.+.....                           ....       
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~---------------------------~~~~-------   43 (260)
T cd06606           5 GELLGRGSFGSVYLALDKDT-------GELMAVKSVELSGDS---------------------------EEEL-------   43 (260)
T ss_pred             eeEeeecCceEEEEEEECCC-------CcEEEEEEeeccccc---------------------------hHHH-------
Confidence            57899999999999999864       699999987654211                           0000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCC--CCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLV--HPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~--t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a  443 (581)
                         -.+.+|...+.++.     ++++  .+.+.  ...  ...+++|||++|.+|.+++..... .......++..++++
T Consensus        44 ---~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~  113 (260)
T cd06606          44 ---EALEREIRILSSLQ-----HPNI--VRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEG  113 (260)
T ss_pred             ---HHHHHHHHHHHHcC-----CCCE--eeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence               11223333333332     2222  22221  112  446799999999999999865321 122223444444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|.||+++       .++      .++|+|||..............   ........+...|.+.
T Consensus       114 -l~~lh~~~~~h~dl~p~ni~i~-------~~~------~~~l~d~~~~~~~~~~~~~~~~---~~~~~~~~y~~pE~~~  176 (260)
T cd06606         114 -LAYLHSNGIVHRDIKGANILVD-------SDG------VVKLADFGCAKRLGDIETGEGT---GSVRGTPYWMAPEVIR  176 (260)
T ss_pred             -HHHHHHCCccccCCCHHHEEEc-------CCC------CEEEcccccEEecccccccccc---cCCCCCccccCHhhhc
Confidence             6789999999999999999999       566      8999999998877655321000   0001112233444432


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . .......|.+.|+..+.+++.+
T Consensus       177 ~-~~~~~~~Dv~slG~il~~l~~g  199 (260)
T cd06606         177 G-EEYGRAADIWSLGCTVIEMATG  199 (260)
T ss_pred             C-CCCCchhhHHHHHHHHHHHHhC
Confidence            2 2244567888888888888875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.36  E-value=3.3e-12  Score=135.46  Aligned_cols=177  Identities=16%  Similarity=0.067  Sum_probs=108.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+...+       ++.||+|+...+..   .                                   
T Consensus        71 ~~~lg~G~~g~Vy~~~~~~~-------~~~valK~~~~~~~---~-----------------------------------  105 (357)
T PHA03209         71 IKTLTPGSEGRVFVATKPGQ-------PDPVVLKIGQKGTT---L-----------------------------------  105 (357)
T ss_pred             EEEecCCCCeEEEEEEECCC-------CceEEEEeCCcccc---H-----------------------------------
Confidence            57899999999999999764       68999998543311   1                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                             .|+..+.++.     +++  +++.+.-  .....++||||+.| ++.+++.....  .......++..++.+ 
T Consensus       106 -------~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~a-  169 (357)
T PHA03209        106 -------IEAMLLQNVN-----HPS--VIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEG-  169 (357)
T ss_pred             -------HHHHHHHhCC-----CCC--CcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHH-
Confidence                   1222222211     111  1222211  12335799999977 56666543211  112223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||.|||++       .++      .++|+|||++.........      ......-.+.++|.+..
T Consensus       170 L~~LH~~~ivHrDlkp~Nill~-------~~~------~~kl~DfG~a~~~~~~~~~------~~~~gt~~y~aPE~~~~  230 (357)
T PHA03209        170 LRYLHAQRIIHRDVKTENIFIN-------DVD------QVCIGDLGAAQFPVVAPAF------LGLAGTVETNAPEVLAR  230 (357)
T ss_pred             HHHHHHCCeecCCCCHHHEEEC-------CCC------CEEEecCccccccccCccc------ccccccccccCCeecCC
Confidence            7889999999999999999998       666      8999999998643221110      00111223445555533


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       .......|.|+|+..+.+++.
T Consensus       231 -~~~~~~~DiwSlGvvl~ell~  251 (357)
T PHA03209        231 -DKYNSKADIWSAGIVLFEMLA  251 (357)
T ss_pred             -CCCCchhhHHHHHHHHHHHHH
Confidence             334456799999999988875

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.36  E-value=4.1e-12  Score=130.18  Aligned_cols=195  Identities=18%  Similarity=0.195  Sum_probs=113.7

Q ss_pred             ceeecccceeEEEEEEeccCCC---------CCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          289 EAPVASGSIAQVHRASLRFRYP---------GQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~---------G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      .+.||+|++|.||+|.......         .....+..||||+.+.......                           
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~---------------------------   62 (296)
T cd05095          10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNA---------------------------   62 (296)
T ss_pred             eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHH---------------------------
Confidence            4679999999999986542100         0011246799998765421110                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcch-------
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHE-------  430 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~-------  430 (581)
                                 .-+|.+|++.+.++.     +++  +++.+.  ......+++|||++|.+|.+++.......       
T Consensus        63 -----------~~~~~~E~~~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  124 (296)
T cd05095          63 -----------RNDFLKEIKIMSRLK-----DPN--IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADV  124 (296)
T ss_pred             -----------HHHHHHHHHHHHhCC-----CCC--cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccc
Confidence                       123444554444332     122  222221  12344689999999999999886532110       


Q ss_pred             -----hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH
Q 008021          431 -----RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE  505 (581)
Q Consensus       431 -----~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~  505 (581)
                           .....++..++.+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+..........
T Consensus       125 ~~~~~~~~~~~~~~i~~a-l~~lH~~~i~H~dlkp~Nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~  190 (296)
T cd05095         125 VTISYSTLIFMATQIASG-MKYLSSLNFVHRDLATRNCLVG-------KNY------TIKIADFGMSRNLYSGDYYRIQG  190 (296)
T ss_pred             cccCHHHHHHHHHHHHHH-HHHHHHCCeecccCChheEEEc-------CCC------CEEeccCcccccccCCcceeccC
Confidence                 0122344444444 7889999999999999999998       566      89999999988664322110000


Q ss_pred             HHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          506 FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       506 l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..   ...-.+.+.|... .+......|.|+|+..+.+++.
T Consensus       191 ~~---~~~~~~~~pe~~~-~~~~~~~~DiwSlG~~l~el~~  227 (296)
T cd05095         191 RA---VLPIRWMSWESIL-LGKFTTASDVWAFGVTLWEILT  227 (296)
T ss_pred             cC---cCccccCCHHHHh-cCCccchhhhhHHHHHHHHHHH
Confidence            00   0000122334332 2444456799999998888875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.35  E-value=5.8e-12  Score=125.07  Aligned_cols=188  Identities=16%  Similarity=0.096  Sum_probs=116.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|....+       ++.||||+....-.                          .. +.        
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~--------------------------~~-~~--------   42 (256)
T cd08220           5 IRVVGRGAFGIVHLCRRKAD-------QKLVIIKQIPVEQM--------------------------TK-DE--------   42 (256)
T ss_pred             EEEecccCceEEEEEEEcCC-------CcEEEEEEEecccc--------------------------cc-HH--------
Confidence            47899999999999998764       69999998654310                          00 00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a  443 (581)
                        .-.+.+|+..+.++.     ++++  ++.+.  ......++||||++|.+|.+++......   ......++..++++
T Consensus        43 --~~~~~~e~~~l~~~~-----~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~  113 (256)
T cd08220          43 --RLAAQNECQVLKLLS-----HPNI--IEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLA  113 (256)
T ss_pred             --HHHHHHHHHHHhhCC-----CCch--hheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence              012334444444331     1222  12221  1223458999999999999998653221   11112233344444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|+||+++       .++     ..++|.|||++..+.......      .......+.+.|.+.
T Consensus       114 -l~~lh~~~i~h~dl~~~nil~~-------~~~-----~~~~l~d~~~~~~~~~~~~~~------~~~~~~~y~aPE~~~  174 (256)
T cd08220         114 -LHHVHTKLILHRDLKTQNILLD-------KHK-----MVVKIGDFGISKILSSKSKAY------TVVGTPCYISPELCE  174 (256)
T ss_pred             -HHHHHhCCeecCCCCHHHEEEc-------CCC-----CEEEEccCCCceecCCCcccc------ccccCCcccCchhcc
Confidence             6788999999999999999997       222     168999999998775432211      011233445555543


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . .......|.+.|+..+.++..+
T Consensus       175 ~-~~~~~~~Dv~slG~~l~~l~~~  197 (256)
T cd08220         175 G-KPYNQKSDIWALGCVLYELASL  197 (256)
T ss_pred             C-CCCCcccchHHHHHHHHHHHhC
Confidence            3 2333467999999888888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.35  E-value=3.5e-12  Score=129.37  Aligned_cols=193  Identities=20%  Similarity=0.127  Sum_probs=113.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|..+..   ....|+.||||..+......                                     
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~---~~~~~~~v~iK~~~~~~~~~-------------------------------------   48 (284)
T cd05081           9 IQQLGKGNFGSVELCRYDPL---QDNTGEVVAVKKLQHSTAEH-------------------------------------   48 (284)
T ss_pred             eeeccCCCCceEEEEEecCC---cCCCCcEEEEEEeccCCHHH-------------------------------------
Confidence            47899999999999986421   01126899999866442110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc---cCC-CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY---PLV-HPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~---~l~-t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~  442 (581)
                        .-++.+|.+.+.++.     ++++  ++.+.   ... ...++||||++|.+|.+++.....  .......++..++.
T Consensus        49 --~~~~~~e~~~l~~l~-----h~~i--v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~  119 (284)
T cd05081          49 --LRDFEREIEILKSLQ-----HDNI--VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICK  119 (284)
T ss_pred             --HHHHHHHHHHHHhCC-----CCCe--eEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHH
Confidence              012334444444331     2222  12111   111 234799999999999999854221  11122234444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..||..|++|+|+||.||+++       .++      +++|+|||++..++.........  ........+.++|.+
T Consensus       120 a-L~~LH~~~i~H~dlkp~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~  183 (284)
T cd05081         120 G-MEYLGSKRYVHRDLATRNILVE-------SEN------RVKIGDFGLTKVLPQDKEYYKVR--EPGESPIFWYAPESL  183 (284)
T ss_pred             H-HHHHHHCCceeccCCHhhEEEC-------CCC------eEEECCCcccccccCCCcceeec--CCCCCceEeeCHHHh
Confidence            4 7789999999999999999998       666      89999999988765432110000  000001123445544


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. +......|.++|+..+.+++.+
T Consensus       184 ~~-~~~~~~~Di~slG~~l~el~~~  207 (284)
T cd05081         184 TE-SKFSVASDVWSFGVVLYELFTY  207 (284)
T ss_pred             cc-CCcChHHHHHHHHHHHHHHhhc
Confidence            22 3344456888888888888763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.35  E-value=6.4e-12  Score=130.24  Aligned_cols=192  Identities=17%  Similarity=0.149  Sum_probs=111.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+  | ...+..||||+..+......                                    
T Consensus        12 ~~~lg~G~~g~Vy~~~~~~~--~-~~~~~~vaiK~~~~~~~~~~------------------------------------   52 (316)
T cd05108          12 IKVLGSGAFGTVYKGLWIPE--G-EKVKIPVAIKELREATSPKA------------------------------------   52 (316)
T ss_pred             eeeeecCCCceEEEEEEecC--C-CccceeEEEEeccccCCHHH------------------------------------
Confidence            57899999999999998653  2 11124599998654321100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|...+..+     .++++  .+.+.. ......+++||++++++.+++......  ......++..++.+ +
T Consensus        53 --~~~~~~e~~~l~~l-----~h~ni--v~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~-L  122 (316)
T cd05108          53 --NKEILDEAYVMASV-----DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG-M  122 (316)
T ss_pred             --HHHHHHHHHHHHhC-----CCCCC--CeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHH-H
Confidence              01233344433322     12222  222211 123457999999999999988653211  11112334344433 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.||..|++|+|+||.||+++       .++      .++|+|||++..+.......-..   .....-.+.+.|.+.. 
T Consensus       123 ~~LH~~~iiH~dlkp~Nill~-------~~~------~~kl~DfG~a~~~~~~~~~~~~~---~~~~~~~y~apE~~~~-  185 (316)
T cd05108         123 NYLEERRLVHRDLAARNVLVK-------TPQ------HVKITDFGLAKLLGADEKEYHAE---GGKVPIKWMALESILH-  185 (316)
T ss_pred             HHHHhcCeeccccchhheEec-------CCC------cEEEccccccccccCCCcceecc---CCccceeecChHHhcc-
Confidence            889999999999999999998       566      89999999998765432211000   0000001334444422 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.++|+..+.+++.
T Consensus       186 ~~~~~~~Di~slGv~l~el~t  206 (316)
T cd05108         186 RIYTHQSDVWSYGVTVWELMT  206 (316)
T ss_pred             CCCCchhhhHHHHHHHHHHHc
Confidence            233345677777777777654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.35  E-value=2.6e-12  Score=131.40  Aligned_cols=127  Identities=12%  Similarity=0.028  Sum_probs=79.4

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP  482 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~  482 (581)
                      ...++||||++| ++.+++.....  .......++..++.+ +..+|.+|++|+|++|.||+++       .++      
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~a-l~~lH~~~i~H~dl~p~nil~~-------~~~------  156 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNG-LYYIHRNKILHRDMKAANILIT-------KDG------  156 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHH-HHHHHHCCeeccCCCHHHEEEC-------CCC------
Confidence            345899999987 66666543211  111223344444444 7889999999999999999998       666      


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++|.|||++..+....... ............+.+.|.+..........|.++|+..+.+++++
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~  220 (310)
T cd07865         157 ILKLADFGLARAFSLSKNSK-PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTR  220 (310)
T ss_pred             cEEECcCCCcccccCCcccC-CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhC
Confidence            89999999988664432210 00000001122345566654322234467999999998888765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.35  E-value=9.3e-12  Score=131.09  Aligned_cols=84  Identities=21%  Similarity=0.208  Sum_probs=56.9

Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh-hcHHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR-RDGRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~-~D~~~~~e~ll  523 (581)
                      +..+|..|++|+|+||.|||++       .++      .++|+|||++..+.......-    ..... .-.+.+.|.+.
T Consensus       186 L~~lH~~~ivHrDikp~Nill~-------~~~------~vkL~DfG~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~~  248 (337)
T cd05054         186 MEFLASRKCIHRDLAARNILLS-------ENN------VVKICDFGLARDIYKDPDYVR----KGDARLPLKWMAPESIF  248 (337)
T ss_pred             HHHHHhCCeecCCCCcceEEEe-------CCC------cEEEeccccchhcccCcchhh----ccCCCCCccccCcHHhc
Confidence            7889999999999999999999       666      899999999987643221100    00000 01244555543


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      . .......|.++|+..+.++++
T Consensus       249 ~-~~~~~~~Di~SlGv~l~el~t  270 (337)
T cd05054         249 D-KVYTTQSDVWSFGVLLWEIFS  270 (337)
T ss_pred             C-CCCCccccHHHHHHHHHHHHH
Confidence            3 334456788888888888775

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.35  E-value=4.8e-12  Score=127.38  Aligned_cols=191  Identities=19%  Similarity=0.239  Sum_probs=111.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||.|++|.||+|+++.+  |  ..+..||||+......+.                            ..       
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~--~--~~~~~vaiK~~~~~~~~~----------------------------~~-------   49 (269)
T cd05065           9 EEVIGAGEFGEVCRGRLKLP--G--KREIFVAIKTLKSGYTEK----------------------------QR-------   49 (269)
T ss_pred             EeEecCCCCCeEEEEEEecC--C--CCceeEEEEEcCCCCCHH----------------------------HH-------
Confidence            57799999999999999763  2  013479999865442110                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l~  446 (581)
                         -+|..|...+.++.     ++++.-..-+.......++||||++|.+|.+++....+.  ......++..++.+ +.
T Consensus        50 ---~~~~~e~~~l~~l~-----h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~a-l~  120 (269)
T cd05065          50 ---RDFLSEASIMGQFD-----HPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAG-MK  120 (269)
T ss_pred             ---HHHHHHHHHHHhCC-----CcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHH-HH
Confidence               12344544443331     222221111122234568999999999999988653221  11122344444444 67


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHH-HHHHHHHHHHhh---cHHHHHHHH
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRV-NLVEFFKAVARR---DGRTAAECT  522 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~-~l~~l~~Al~~~---D~~~~~e~l  522 (581)
                      .+|..|++|+|+||.||+++       .++      .++|+|||.+..+...... .+..    ...+   -.+.+.|.+
T Consensus       121 ~lH~~g~~H~dl~p~nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~----~~~~~~~~~y~~PE~~  183 (269)
T cd05065         121 YLSEMNYVHRDLAARNILVN-------SNL------VCKVSDFGLSRFLEDDTSDPTYTS----SLGGKIPIRWTAPEAI  183 (269)
T ss_pred             HHHHCCEeecccChheEEEc-------CCC------cEEECCCccccccccCcccccccc----ccCCCcceeecCHhHh
Confidence            88999999999999999998       556      8999999988755432211 0000    0000   012344443


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhh
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLP  545 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~  545 (581)
                      . -+......|.|+|+..+.+++
T Consensus       184 ~-~~~~~~~~DvwslG~~l~e~l  205 (269)
T cd05065         184 A-YRKFTSASDVWSYGIVMWEVM  205 (269)
T ss_pred             c-cCcccchhhhhhhHHHHHHHh
Confidence            2 233344567788877777755

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.35  E-value=8.3e-12  Score=127.08  Aligned_cols=195  Identities=18%  Similarity=0.167  Sum_probs=113.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|......++  ..+..||||+.+.+.....                                    
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~--~~~~~~aiK~~~~~~~~~~------------------------------------   51 (288)
T cd05050          10 VRDIGQGAFGRVFQARAPGLLPY--EPFTMVAVKMLKEEASADM------------------------------------   51 (288)
T ss_pred             cccccccccccEEEEEEcccCCC--CcceeEEEEecCCCcCHHH------------------------------------
Confidence            56899999999999997531111  1258999998765421110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--------------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--------------------  428 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--------------------  428 (581)
                        +-++.+|...+.++     +++++.-..-+.......+++|||++|.+|.+++.....                    
T Consensus        52 --~~~~~~ei~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  124 (288)
T cd05050          52 --QADFQREAALMAEF-----DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNP  124 (288)
T ss_pred             --HHHHHHHHHHHHhc-----CCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccc
Confidence              01233344433332     122221111111122345899999999999999864211                    


Q ss_pred             ---chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH
Q 008021          429 ---HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE  505 (581)
Q Consensus       429 ---~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~  505 (581)
                         .......++..++.+ +..+|..|++|+|++|.||+++       .++      .++++|||++..+....-..-. 
T Consensus       125 ~~l~~~~~~~~~~~i~~a-L~~lH~~~i~H~dl~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~-  189 (288)
T cd05050         125 LPLSCTEQLCIAKQVAAG-MAYLSERKFVHRDLATRNCLVG-------ENM------VVKIADFGLSRNIYSADYYKAS-  189 (288)
T ss_pred             cccCHHHHHHHHHHHHHH-HHHHHhCCeecccccHhheEec-------CCC------ceEECccccceecccCcccccc-
Confidence               001112344444444 6789999999999999999998       666      8999999988754322100000 


Q ss_pred             HHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          506 FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       506 l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                        ........+.++|.+.. .......|.++|+..+.+++.
T Consensus       190 --~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~  227 (288)
T cd05050         190 --ENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFS  227 (288)
T ss_pred             --CCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHh
Confidence              00000012344554432 334456788999888888875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=9.4e-12  Score=124.49  Aligned_cols=188  Identities=19%  Similarity=0.159  Sum_probs=115.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|.||+|..+.+       ++.|++|+..+....                                      
T Consensus        11 ~~~l~~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~--------------------------------------   45 (275)
T cd06608          11 VEVIGEGTYGKVYKARHKKT-------GQLVAIKIMDIIEDE--------------------------------------   45 (275)
T ss_pred             eeeecCCCCeEEEEEEECCC-------CcEEEEEEEecCchh--------------------------------------
Confidence            57899999999999999764       689999997654210                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--------CCCcEEEEeccCCccHHHHHHhhh--c---chhhHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--------VHPAVLVETYEQGECVSRYVDELQ--G---HERLKSA  435 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--------~t~~VLVmEyi~G~~L~~~l~~~~--~---~~~~~~~  435 (581)
                        +-++.+|...+.++.    ++++  +++.+..+        ....++||||++|.+|.+++....  .   .......
T Consensus        46 --~~~~~~e~~~l~~~~----~h~~--i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~  117 (275)
T cd06608          46 --EEEIKEEYNILRKYS----NHPN--IATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAY  117 (275)
T ss_pred             --HHHHHHHHHHHHHhc----CCCC--hheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHH
Confidence              112233444443332    1121  11222111        122479999999999999875422  1   1111223


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      ++..++++ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+.......-     .....-.
T Consensus       118 ~~~ql~~a-l~~lH~~~i~H~~l~p~ni~~~-------~~~------~~~l~d~~~~~~~~~~~~~~~-----~~~~~~~  178 (275)
T cd06608         118 ILRETLRG-LAYLHENKVIHRDIKGQNILLT-------KNA------EVKLVDFGVSAQLDSTLGRRN-----TFIGTPY  178 (275)
T ss_pred             HHHHHHHH-HHHHhcCCcccCCCCHHHEEEc-------cCC------eEEECCCccceecccchhhhc-----Ccccccc
Confidence            44444444 6788999999999999999998       666      899999999876644321110     0011122


Q ss_pred             HHHHHHHHhh----cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          516 RTAAECTLRL----SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       516 ~~~~e~ll~l----~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +.+.|.+...    .......|.+.|+..+.+++++.
T Consensus       179 y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~  215 (275)
T cd06608         179 WMAPEVIACDEQPDASYDARSDVWSLGITAIELADGK  215 (275)
T ss_pred             ccCHhHhcccccccCCccccccHHHhHHHHHHHHhCC
Confidence            4445544221    11223568999999998888763

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.35  E-value=6.8e-12  Score=124.58  Aligned_cols=188  Identities=16%  Similarity=0.135  Sum_probs=113.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||.|++|.||+|.+..        ++.||+|+.......                            +          
T Consensus         1 ~~lg~g~~g~v~~~~~~~--------~~~v~~K~~~~~~~~----------------------------~----------   34 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG--------NTEVAVKTCRSTLPP----------------------------D----------   34 (251)
T ss_pred             CccccCCCceEEEEEEeC--------CCcEEEEeccccCCH----------------------------H----------
Confidence            468999999999999864        589999976543111                            0          


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALLKM  447 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l~~  447 (581)
                      ..-.+.+|.+.+.++     +++++.-...+.......++||||++|.+|.+++......  ......++..++++ +..
T Consensus        35 ~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-l~~  108 (251)
T cd05041          35 LKRKFLQEAEILKQY-----DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAG-MEY  108 (251)
T ss_pred             HHHHHHHHHHHHHhC-----CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHH
Confidence            011233444433332     1222221112223345568999999999999988542211  11112233333333 678


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      +|..|++|+|++|.||+++       .++      +++|+|||++.......... ..-..  .....+.+.|.+. -+.
T Consensus       109 lH~~~i~h~di~p~nili~-------~~~------~~~l~d~g~~~~~~~~~~~~-~~~~~--~~~~~y~~PE~~~-~~~  171 (251)
T cd05041         109 LESKNCIHRDLAARNCLVG-------ENN------VLKISDFGMSREEEGGIYTV-SDGLK--QIPIKWTAPEALN-YGR  171 (251)
T ss_pred             HHhCCEehhhcCcceEEEc-------CCC------cEEEeeccccccccCCccee-ccccC--cceeccCChHhhc-cCC
Confidence            9999999999999999998       666      89999999987654211000 00000  0001234455442 244


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 008021          528 QQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~  546 (581)
                      .....|.++|+..+.++++
T Consensus       172 ~~~~~Di~slG~i~~~l~t  190 (251)
T cd05041         172 YTSESDVWSYGILLWETFS  190 (251)
T ss_pred             CCcchhHHHHHHHHHHHHh
Confidence            4456799999988888886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.34  E-value=7.3e-12  Score=125.56  Aligned_cols=185  Identities=17%  Similarity=0.158  Sum_probs=113.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|....        +..||||+.+++-..                                      
T Consensus        11 ~~~lg~g~~~~vy~~~~~~--------~~~~~iK~~~~~~~~--------------------------------------   44 (260)
T cd05073          11 EKKLGAGQFGEVWMATYNK--------HTKVAVKTMKPGSMS--------------------------------------   44 (260)
T ss_pred             EeEecCccceEEEEEEecC--------CccEEEEecCCChhH--------------------------------------
Confidence            5789999999999998754        478999987654110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch---hhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE---RLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~---~~~~~la~~~i~a~l  445 (581)
                        .-++.+|...+.++.    ...-+.+...+..  ...+++|||++|.+|.+++.......   .....++..++.+ +
T Consensus        45 --~~~~~~e~~~l~~l~----~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a-L  115 (260)
T cd05073          45 --VEAFLAEANVMKTLQ----HDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG-M  115 (260)
T ss_pred             --HHHHHHHHHHHHhcC----CCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHH-H
Confidence              012334444443331    1111222222221  45589999999999999886422111   1112234444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .++      .++|+|||.+..+...........    .....+.+.|.+. .
T Consensus       116 ~~lH~~~i~H~dl~p~ni~i~-------~~~------~~~l~d~~~~~~~~~~~~~~~~~~----~~~~~y~~PE~~~-~  177 (260)
T cd05073         116 AFIEQRNYIHRDLRAANILVS-------ASL------VCKIADFGLARVIEDNEYTAREGA----KFPIKWTAPEAIN-F  177 (260)
T ss_pred             HHHHhCCccccccCcceEEEc-------CCC------cEEECCCcceeeccCCCcccccCC----cccccccCHhHhc-c
Confidence            789999999999999999998       666      899999999877654221110000    0001134455442 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +......|.++|+..+.++++
T Consensus       178 ~~~~~~~Di~slG~~l~~l~t  198 (260)
T cd05073         178 GSFTIKSDVWSFGILLMEIVT  198 (260)
T ss_pred             CCcCccccchHHHHHHHHHHh
Confidence            344445788999888888886

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.34  E-value=5.9e-12  Score=125.59  Aligned_cols=194  Identities=14%  Similarity=0.117  Sum_probs=118.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|.||+|+...+       ++.|+||+.+.....  ..                         ..       
T Consensus         5 ~~~lg~G~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~--~~-------------------------~~-------   43 (264)
T cd06626           5 GNKIGGGTFGKVYTAVNLDT-------GELMAVKEIRIQDND--PK-------------------------TI-------   43 (264)
T ss_pred             eeEeecCCCcEEEEEEECCC-------CcEEEEEEEECcccc--hH-------------------------HH-------
Confidence            47899999999999998754       689999997654221  00                         00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -++..|...+.++.     +++  +.+.+.  .......+|+||++|.+|.+++..... .......++..++.+ +
T Consensus        44 ---~~~~~e~~~~~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~-l  112 (264)
T cd06626          44 ---KEIADEMKVLELLK-----HPN--LVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEG-L  112 (264)
T ss_pred             ---HHHHHHHHHHHhCC-----CCC--hhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHH-H
Confidence               11222333333221     111  111111  122345799999999999998865321 112223344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|+||+++       .++      .++|+|||.+..+....... ...+.+......+...|.+...
T Consensus       113 ~~lh~~~i~H~dl~~~nil~~-------~~~------~~kl~d~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~  178 (264)
T cd06626         113 AYLHSHGIVHRDIKPANIFLD-------HNG------VIKLGDFGCAVKLKNNTTTM-GEEVQSLAGTPAYMAPEVITGG  178 (264)
T ss_pred             HHHHHCCcccCCCCHHHEEEC-------CCC------CEEEcccccccccCCCCCcc-cccccCCcCCcCccChhhccCC
Confidence            788999999999999999998       666      89999999988775543211 0001111122233445554332


Q ss_pred             c--CCCCCCCHHHHHHHHHHhhhHh
Q 008021          526 S--KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       526 ~--~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .  ......|.+.|+..+.+++.+.
T Consensus       179 ~~~~~~~~~Dv~s~G~il~~l~~g~  203 (264)
T cd06626         179 KGKGHGRAADIWSLGCVVLEMATGK  203 (264)
T ss_pred             CCCCCCcccchHHHHHHHHHHHhCC
Confidence            2  1344679999999999988763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.34  E-value=5.1e-12  Score=126.21  Aligned_cols=186  Identities=17%  Similarity=0.140  Sum_probs=111.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.        ++.|++|+........                             .       
T Consensus        11 ~~~ig~g~~~~vy~~~~~~--------~~~~~~k~~~~~~~~~-----------------------------~-------   46 (261)
T cd05148          11 ERKLGSGYFGEVWEGLWKN--------RVRVAIKILKSDDLLK-----------------------------Q-------   46 (261)
T ss_pred             hhhhccCCCccEEEeEecC--------CCcEEEEeccccchhh-----------------------------H-------
Confidence            4678999999999999975        5899999865431100                             0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch---hhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE---RLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~---~~~~~la~~~i~a~l  445 (581)
                         -++..|...+.++.     ++++.-...+.......++||||++|.+|.+++....+..   .....++..++.+ +
T Consensus        47 ---~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~a-l  117 (261)
T cd05148          47 ---QDFQKEVQALKRLR-----HKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEG-M  117 (261)
T ss_pred             ---HHHHHHHHHHhcCC-----CcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHH-H
Confidence               01222333222221     1111100011112234579999999999999986432211   1112344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .++      .++|.|||.+..+.......-     .......+.+.|.+.. 
T Consensus       118 ~~lH~~~i~h~dl~~~nilv~-------~~~------~~kl~d~g~~~~~~~~~~~~~-----~~~~~~~~~~PE~~~~-  178 (261)
T cd05148         118 AYLEEQNSIHRDLAARNILVG-------EDL------VCKVADFGLARLIKEDVYLSS-----DKKIPYKWTAPEAASH-  178 (261)
T ss_pred             HHHHHCCeeccccCcceEEEc-------CCc------eEEEccccchhhcCCcccccc-----CCCCceEecCHHHHcc-
Confidence            788999999999999999998       666      899999999877643221100     0000012344554432 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.+.|+..+.+++.
T Consensus       179 ~~~~~~~DiwslG~~l~~l~~  199 (261)
T cd05148         179 GTFSTKSDVWSFGILLYEMFT  199 (261)
T ss_pred             CCCCchhhHHHHHHHHHHHHc
Confidence            334456788888888888875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.34  E-value=1.3e-11  Score=124.42  Aligned_cols=187  Identities=17%  Similarity=0.111  Sum_probs=112.0

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||.|++|+||+|+.+.+       ++.||||+.+.......                                     
T Consensus         5 ~~lg~g~~~~v~~~~~~~~-------~~~~aik~~~~~~~~~~-------------------------------------   40 (282)
T cd07831           5 GKIGEGTFSEVLKAQSRKT-------GKYYAIKCMKKHFKSLE-------------------------------------   40 (282)
T ss_pred             eeccccccceEEEEEEcCC-------CcEEEEEEehhccCCch-------------------------------------
Confidence            5789999999999998764       68999998654321100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcc-ccccccc-CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYP-LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                       +.+..+|...+.++.    +++++. +...+.+ .....++||||++| ++.+++.....  .......++..++.+ +
T Consensus        41 -~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~-L  113 (282)
T cd07831          41 -QVNNLREIQALRRLS----PHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKS-L  113 (282)
T ss_pred             -hhhHHHHHHHHhhcC----CCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHH-H
Confidence             001112333333221    122221 1111111 11445899999987 56555543211  111123344444443 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.+|..|++|+|++|.||+++       . |      .++|+|||++..+.......  .    ......+.++|.+..-
T Consensus       114 ~~LH~~~i~H~dl~p~ni~l~-------~-~------~~kl~dfg~~~~~~~~~~~~--~----~~~~~~y~aPE~~~~~  173 (282)
T cd07831         114 DHMHRNGIFHRDIKPENILIK-------D-D------ILKLADFGSCRGIYSKPPYT--E----YISTRWYRAPECLLTD  173 (282)
T ss_pred             HHHHHCCceecccCHHHEEEc-------C-C------CeEEEecccccccccCCCcC--C----CCCCcccCChhHhhcC
Confidence            889999999999999999999       5 6      89999999988764322110  0    0112345566655443


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.+.|+..+.+++.+
T Consensus       174 ~~~~~~~Di~slGv~l~el~~~  195 (282)
T cd07831         174 GYYGPKMDIWAVGCVFFEILSL  195 (282)
T ss_pred             CCCCcchhHHHHHHHHHHHHcC
Confidence            3344567999999999998875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.34  E-value=4.1e-12  Score=132.85  Aligned_cols=194  Identities=18%  Similarity=0.112  Sum_probs=116.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+.+.+       |+.||||+........                           ....      
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~-------~~~valK~~~~~~~~~---------------------------~~~~------   49 (334)
T cd07855          10 IENIGSGAYGVVCSAIDTRS-------GKKVAIKKIPHAFDVP---------------------------TLAK------   49 (334)
T ss_pred             eeeeecCCCeEEEEEEEcCC-------CCEEEEEEeccccccc---------------------------cchH------
Confidence            46899999999999999875       7999999876431100                           0000      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccc---cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVY---PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~---~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a  443 (581)
                          .+.+|...+.++.     ++++ .+...+.   ......++||||++| +|.+++..... .......++..++.+
T Consensus        50 ----~~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~~qi~~a  119 (334)
T cd07855          50 ----RTLRELKILRHFK-----HDNIIAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRG  119 (334)
T ss_pred             ----HHHHHHHHHHhcC-----CCCccCHHHhccccCCCCceEEEEEehhhh-hHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence                0112333332221     1111 1111111   111234799999976 78777643221 112223344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..||..|++|+|++|.||+++       .+|      .++|+|||++..+....... ............+.+.|.+.
T Consensus       120 -L~~LH~~~ivH~dlkp~Nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~  184 (334)
T cd07855         120 -LKYIHSANVIHRDLKPSNLLVN-------EDC------ELRIGDFGMARGLSSSPTEH-KYFMTEYVATRWYRAPELLL  184 (334)
T ss_pred             -HHHHHHCCeecCCCCHHHEEEc-------CCC------cEEecccccceeecccCcCC-CcccccccccccccChHHhc
Confidence             7789999999999999999998       677      89999999987664322110 00000011223456677765


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .........|.++|+..+.+++.+
T Consensus       185 ~~~~~~~~~Di~slG~~l~el~~g  208 (334)
T cd07855         185 SLPEYTTAIDMWSVGCIFAEMLGR  208 (334)
T ss_pred             CCcccccccchHHHHHHHHHHHcC
Confidence            555556678999999999998866

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.34  E-value=7.7e-12  Score=123.73  Aligned_cols=122  Identities=20%  Similarity=0.166  Sum_probs=75.8

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ..+++|||++|.+|.+++..... .......++..++.+ +..+|..|++|+|++|.||+++       .++      .+
T Consensus        67 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~-l~~lh~~~~~H~~l~p~ni~~~-------~~~------~~  132 (250)
T cd05123          67 KLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLA-LEYLHSLGIIYRDLKPENILLD-------ADG------HI  132 (250)
T ss_pred             eeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHHCCceecCCCcceEEEc-------CCC------cE
Confidence            34799999999999998865321 111122333333333 6789999999999999999998       666      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++..........     ........+..+|.... .......|.++|+..+.+++.+
T Consensus       133 ~l~d~~~~~~~~~~~~~~-----~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g  189 (250)
T cd05123         133 KLTDFGLAKELSSEGSRT-----NTFCGTPEYLAPEVLLG-KGYGKAVDWWSLGVLLYEMLTG  189 (250)
T ss_pred             EEeecCcceecccCCCcc-----cCCcCCccccChHHhCC-CCCCchhhHHHHHHHHHHHHHC
Confidence            999999987664432000     00011112333443322 1122345777777777777665

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.34  E-value=6.1e-12  Score=128.56  Aligned_cols=194  Identities=17%  Similarity=0.127  Sum_probs=111.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|.....  +....+..|++|.......                                       
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~--~~~~~~~~~~~k~~~~~~~---------------------------------------   48 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNL--SPTKDKMLVAVKALKDPTL---------------------------------------   48 (291)
T ss_pred             eeeecccCCCeEEEeEeecc--CCCCcceeeEEEecCCccH---------------------------------------
Confidence            47899999999999986431  1111246799997543211                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-----------------chh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-----------------HER  431 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~~~  431 (581)
                      ..+-++.+|...+.++.     ++++.-..-+.......++||||++|.+|.+++.....                 ...
T Consensus        49 ~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  123 (291)
T cd05094          49 AARKDFQREAELLTNLQ-----HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS  123 (291)
T ss_pred             HHHHHHHHHHHHHhcCC-----CCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHH
Confidence            11123445555544431     22222111122233456899999999999999864211                 011


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ....++..++.+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..............   ..
T Consensus       124 ~~~~i~~~i~~a-l~~lH~~~i~H~dlkp~Nil~~-------~~~------~~~l~dfg~a~~~~~~~~~~~~~~---~~  186 (291)
T cd05094         124 QMLHIASQIASG-MVYLASQHFVHRDLATRNCLVG-------ANL------LVKIGDFGMSRDVYSTDYYRVGGH---TM  186 (291)
T ss_pred             HHHHHHHHHHHH-HHHHHhCCeeecccCcceEEEc-------cCC------cEEECCCCcccccCCCceeecCCC---CC
Confidence            122344444444 6789999999999999999998       666      899999999875543221100000   00


Q ss_pred             hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          512 RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..-.+.++|.+.. .......|.++|+..+.++++
T Consensus       187 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t  220 (291)
T cd05094         187 LPIRWMPPESIMY-RKFTTESDVWSFGVILWEIFT  220 (291)
T ss_pred             cceeecChHHhcc-CCCCchhhHHHHHHHHHHHHh
Confidence            0011234444322 223334577777777777665

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.34  E-value=9.1e-12  Score=125.30  Aligned_cols=196  Identities=12%  Similarity=0.047  Sum_probs=117.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       |..||+|+........                           +. .+     
T Consensus         7 ~~~lg~g~~g~vy~~~~~~~-------~~~~~~k~~~~~~~~~---------------------------~~-~~-----   46 (266)
T cd06651           7 GKLLGQGAFGRVYLCYDVDT-------GRELAAKQVQFDPESP---------------------------ET-SK-----   46 (266)
T ss_pred             cceecCCCCEEEEEEEEcCC-------CcEEEEEEeecCcCCc---------------------------hh-HH-----
Confidence            57899999999999998765       6899999865432110                           00 00     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-cccccccC-CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                       .-..+.+|...+.++.     ++++. +...+... ....+++|||++|.+|.+++..... .......++..++.+ +
T Consensus        47 -~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~-l  119 (266)
T cd06651          47 -EVSALECEIQLLKNLQ-----HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEG-M  119 (266)
T ss_pred             -HHHHHHHHHHHHHHcC-----CCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence             0012344555444432     22221 11111111 1234689999999999998754221 112223344444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .++      +++|.|||++..+.......-  -.........+.+.|.+.. 
T Consensus       120 ~~LH~~~i~H~~l~p~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-  183 (266)
T cd06651         120 SYLHSNMIVHRDIKGANILRD-------SAG------NVKLGDFGASKRLQTICMSGT--GIRSVTGTPYWMSPEVISG-  183 (266)
T ss_pred             HHHHhCCeeeCCCCHHHEEEC-------CCC------CEEEccCCCccccccccccCC--ccccCCccccccCHHHhCC-
Confidence            789999999999999999998       566      899999999876543111000  0001112233556665532 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       184 ~~~~~~~Dv~slG~i~~el~~g  205 (266)
T cd06651         184 EGYGRKADVWSLGCTVVEMLTE  205 (266)
T ss_pred             CCCCchhhhHHHHHHHHHHHHC
Confidence            3334467999999999988876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.34  E-value=5.7e-12  Score=129.56  Aligned_cols=125  Identities=10%  Similarity=0.063  Sum_probs=74.8

Q ss_pred             cEEEEeccCCccHHHHHHhhh-cchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEE
Q 008021          407 AVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVI  485 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~-~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lv  485 (581)
                      .+++||++.+ ++.+.+.... ........++..++.+ +..+|..|++|||+||.|||++       .++      .++
T Consensus       102 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~-l~~lH~~~iiHrDiKp~Nill~-------~~~------~~~  166 (294)
T PHA02882        102 RFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTT-LEYIHEHGISHGDIKPENIMVD-------GNN------RGY  166 (294)
T ss_pred             EEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEc-------CCC------cEE
Confidence            3678887644 4555443321 1111123344444444 7889999999999999999998       566      899


Q ss_pred             EEecccccccCHhhHH-HHHHHHHHHHhh-cHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          486 FLDVGMTAELSKTDRV-NLVEFFKAVARR-DGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       486 LiDFGl~~~L~~~~r~-~l~~l~~Al~~~-D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |+|||++..+...... ....-......+ -.+.+.+.+. -..+....|.|+|+..+.+++++
T Consensus       167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~-~~~~~~~~DiwSlG~~l~el~~g  229 (294)
T PHA02882        167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN-GACVTRRGDLESLGYCMLKWAGI  229 (294)
T ss_pred             EEEcCCceeeccCCcccccccccccccCCCccccCHHHhC-CCCCCcHHHHHHHHHHHHHHHhC
Confidence            9999999876432211 000000000112 2334444433 33445567999999999998876

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.34  E-value=1.1e-11  Score=127.90  Aligned_cols=198  Identities=16%  Similarity=0.123  Sum_probs=110.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|.||+|.......+....+..||+|+.+++....   +                                 
T Consensus        23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~---------------------------------   66 (307)
T cd05098          23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---D---------------------------------   66 (307)
T ss_pred             eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---H---------------------------------
Confidence            5799999999999998743100101124679999987652210   0                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc-----------------hh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-----------------ER  431 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------------~~  431 (581)
                        .-++.+|...+.++.    +++++.-...+.......++||||++|.+|.+++......                 ..
T Consensus        67 --~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~  140 (307)
T cd05098          67 --LSDLISEMEMMKMIG----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFK  140 (307)
T ss_pred             --HHHHHHHHHHHHHhc----CCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHH
Confidence              011233433333321    1222211111112234568999999999999998642110                 01


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ....++..++.+ ++.+|..|++|+|+||.||+++       .++      .++|+|||.+..+.........   ....
T Consensus       141 ~~~~~~~qi~~a-L~~lH~~gi~H~dlkp~Nill~-------~~~------~~kL~dfg~a~~~~~~~~~~~~---~~~~  203 (307)
T cd05098         141 DLVSCAYQVARG-MEYLASKKCIHRDLAARNVLVT-------EDN------VMKIADFGLARDIHHIDYYKKT---TNGR  203 (307)
T ss_pred             HHHHHHHHHHHH-HHHHHHCCcccccccHHheEEc-------CCC------cEEECCCcccccccccchhhcc---ccCC
Confidence            112233344433 7889999999999999999998       666      8999999998765432111000   0000


Q ss_pred             hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          512 RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..-.+.++|.+.. .......|.++|+..+.+++.
T Consensus       204 ~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~  237 (307)
T cd05098         204 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT  237 (307)
T ss_pred             CccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHc
Confidence            0012334443322 223334567777776666654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.34  E-value=9.5e-12  Score=125.38  Aligned_cols=193  Identities=16%  Similarity=0.118  Sum_probs=116.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|..+....  ...+..||||....+...                                      
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~--~~~~~~~aik~~~~~~~~--------------------------------------   50 (277)
T cd05032          11 IRELGQGSFGMVYEGLAKGVVK--GEPETRVAIKTVNENASM--------------------------------------   50 (277)
T ss_pred             EeEecCCCCceEEEEEEeccCC--CCcceeEEEEecCCccCH--------------------------------------
Confidence            4789999999999999875310  112578999986543110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhcch-----------hhHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQGHE-----------RLKSA  435 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~-----------~~~~~  435 (581)
                      ....++.+|...+.++.     ++++  .+.+  .......++||||++|.+|.+++.......           .....
T Consensus        51 ~~~~~~~~e~~~l~~~~-----~~~i--~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  123 (277)
T cd05032          51 RERIEFLNEASVMKEFN-----CHHV--VRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ  123 (277)
T ss_pred             HHHHHHHHHHHHHHhCC-----CCce--eEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHH
Confidence            01123344554444321     2221  1222  122345689999999999999986422111           01122


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      ++..++.+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+..........   .....-.
T Consensus       124 ~~~~i~~~-l~~lH~~~i~H~di~p~nill~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~  186 (277)
T cd05032         124 MAAEIADG-MAYLAAKKFVHRDLAARNCMVA-------EDL------TVKIGDFGMTRDIYETDYYRKGG---KGLLPVR  186 (277)
T ss_pred             HHHHHHHH-HHHHHhCCccccccChheEEEc-------CCC------CEEECCcccchhhccCcccccCC---CCCcccc
Confidence            33333333 7789999999999999999998       667      89999999987654332100000   0000112


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +.+.|.+.. +......|.++|+..+.++++
T Consensus       187 y~aPE~~~~-~~~~~~~Di~slG~il~el~t  216 (277)
T cd05032         187 WMAPESLKD-GVFTTKSDVWSFGVVLWEMAT  216 (277)
T ss_pred             ccCHHHHhc-CCCCcccchHHHHHHHHHhhc
Confidence            445555432 344456799999999999876

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.33  E-value=4e-12  Score=132.99  Aligned_cols=196  Identities=18%  Similarity=0.126  Sum_probs=115.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       |+.||||.........                          ..         
T Consensus        12 ~~~lg~g~~~~v~~~~~~~~-------~~~~~vK~~~~~~~~~--------------------------~~---------   49 (337)
T cd07852          12 LQKLGKGAYGIVWKAIDRRT-------KEVVALKKIFDAFRNA--------------------------TD---------   49 (337)
T ss_pred             hHhhcCCCCeeEEEEEEcCC-------CeEEEEEeeccccCcc--------------------------hh---------
Confidence            47799999999999998764       6899999764321100                          00         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccC-CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                        ...+..|...+.++    .+++++ .+...+... ....++||||++| +|.+++............++..++.+ +.
T Consensus        50 --~~~~~~E~~~l~~l----~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~-L~  121 (337)
T cd07852          50 --AQRTFREIMFLQEL----GDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRANILEDVHKRYIMYQLLKA-LK  121 (337)
T ss_pred             --hhhhhHHHHHHHHh----cCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcCCCCHHHHHHHHHHHHHH-HH
Confidence              01122344434333    112222 111111111 1234799999986 88887754211222223344444444 77


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|++|.||+++       .+|      .++|+|||++..+.......-............+.+.|.+....
T Consensus       122 ~LH~~~i~H~dl~p~nill~-------~~~------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  188 (337)
T cd07852         122 YIHSGNVIHRDLKPSNILLN-------SDC------RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGST  188 (337)
T ss_pred             HHHHCCeecCCCCHHHEEEc-------CCC------cEEEeeccchhccccccccccCcchhcccccccccCceeeeccc
Confidence            89999999999999999998       677      89999999988765432210000000111222345555554433


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.++|+..+.+++.+
T Consensus       189 ~~~~~sDi~slG~~l~el~tg  209 (337)
T cd07852         189 RYTKGVDMWSVGCILGEMLLG  209 (337)
T ss_pred             cccccchHHHHHHHHHHHHhC
Confidence            344567999999998888876

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.33  E-value=9.3e-12  Score=126.14  Aligned_cols=192  Identities=17%  Similarity=0.141  Sum_probs=113.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+  |. .....||+|+...+...                                      
T Consensus        12 ~~~ig~g~~g~v~~~~~~~~--~~-~~~~~~aik~~~~~~~~--------------------------------------   50 (279)
T cd05057          12 IKVLGSGAFGTVYKGVWIPE--GE-KVKIPVAIKVLREETSP--------------------------------------   50 (279)
T ss_pred             cceecCCCCccEEEEEEecC--CC-CcceEEEEEeccCCCCH--------------------------------------
Confidence            47899999999999998763  20 11246999986544210                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l  445 (581)
                      ....++.+|+..+.++.     ++++ .+....  .....++||||++|.+|.+++......  ......++..++.+ +
T Consensus        51 ~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~--~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~-l  122 (279)
T cd05057          51 KANKEILDEAYVMASVD-----HPHVVRLLGIC--LSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKG-M  122 (279)
T ss_pred             HHHHHHHHHHHHHHhCC-----CCCcceEEEEE--ecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH-H
Confidence            01123445665555441     2221 111111  225678999999999999988653221  11122334444443 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|++|.||+++       .++      .++|+|||++..+..........   .......+.+.|.+ ..
T Consensus       123 ~~LH~~~i~H~di~p~nil~~-------~~~------~~kL~dfg~~~~~~~~~~~~~~~---~~~~~~~y~~PE~~-~~  185 (279)
T cd05057         123 SYLEEKRLVHRDLAARNVLVK-------TPQ------HVKITDFGLAKLLDVDEKEYHAE---GGKVPIKWMALESI-LH  185 (279)
T ss_pred             HHHHhCCEEecccCcceEEEc-------CCC------eEEECCCcccccccCcccceecC---CCcccccccCHHHh-hc
Confidence            889999999999999999998       566      89999999988765332110000   00000112334433 22


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +......|.++|+..+.++++
T Consensus       186 ~~~~~~~Di~slG~~l~el~~  206 (279)
T cd05057         186 RIYTHKSDVWSYGVTVWELMT  206 (279)
T ss_pred             CCcCchhhHHHHHHHHHHHhc
Confidence            333445677777777777664

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.33  E-value=6.9e-11  Score=113.82  Aligned_cols=139  Identities=20%  Similarity=0.210  Sum_probs=99.1

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      .+++.|.-+.++.+...         |.++++|..-|.--..=+-|.++-+                             
T Consensus         2 ~~i~~GAEa~i~~~~~~---------g~~av~K~Ri~K~YR~p~LD~klrr-----------------------------   43 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL---------GLPAVVKERIPKRYRHPELDEKLRR-----------------------------   43 (204)
T ss_pred             chhhCCcceeEEeeecc---------CcceEEEeecCcccCChHHHHHHHH-----------------------------
Confidence            46788999999999764         4789999877653222222221111                             


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL  449 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~  449 (581)
                        -.-++||+.+.+.++.     +|.+|.+|.-......|||||++|..|.+++...  .    ..+.+..- ..+.-||
T Consensus        44 --~Rt~~Earil~~a~~~-----GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~--~----~~~~r~vG-~~vg~lH  109 (204)
T COG3642          44 --ERTRREARILAKAREA-----GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA--R----PDLLREVG-RLVGKLH  109 (204)
T ss_pred             --HHHHHHHHHHHHHHHc-----CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc--c----hHHHHHHH-HHHHHHH
Confidence              1235788888887654     7888888876667778999999999999988653  1    12222211 2356689


Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE  494 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~  494 (581)
                      ..||+|+||-+.||++.       .+       ++.+||||+...
T Consensus       110 ~~givHGDLTtsNiIl~-------~~-------~i~~IDfGLg~~  140 (204)
T COG3642         110 KAGIVHGDLTTSNIILS-------GG-------RIYFIDFGLGEF  140 (204)
T ss_pred             hcCeecCCCccceEEEe-------CC-------cEEEEECCcccc
Confidence            99999999999999998       33       599999999764

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.33  E-value=7.5e-12  Score=127.55  Aligned_cols=194  Identities=19%  Similarity=0.218  Sum_probs=115.9

Q ss_pred             ceeecccceeEEEEEEeccCCCC----------CCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          289 EAPVASGSIAQVHRASLRFRYPG----------QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G----------~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      .+.||.|++|.||+|+...+ .+          ....+..||+|+...+....                           
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~---------------------------   61 (296)
T cd05051          10 VEKLGEGQFGEVHLCEADGL-QDFSEKAFAENDNADAPVLVAVKVLRPDASDN---------------------------   61 (296)
T ss_pred             cccccCCCCccEEEEEeccC-CcccccccccccccCCceeEEEEEecCccCHH---------------------------
Confidence            57899999999999998653 10          01124679999876653210                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc--------
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG--------  428 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~--------  428 (581)
                                 ..-++.+|.+.+.++.     ++++  .+.+  .......+++|||++|.+|.+++.....        
T Consensus        62 -----------~~~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  123 (296)
T cd05051          62 -----------AREDFLKEVKILSRLS-----DPNI--ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACN  123 (296)
T ss_pred             -----------HHHHHHHHHHHHHhcC-----CCCE--eEEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccc
Confidence                       0112334444444332     1222  1111  1122456899999999999999865321        


Q ss_pred             ----chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHH
Q 008021          429 ----HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV  504 (581)
Q Consensus       429 ----~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~  504 (581)
                          .......++..++.+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+.........
T Consensus       124 ~~~~~~~~~~~~~~~i~~a-l~~LH~~~i~H~dlkp~Nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~~  189 (296)
T cd05051         124 SKSLSFSTLLYMATQIASG-MRYLESLNFVHRDLATRNCLVG-------KNY------TIKIADFGMSRNLYSSDYYRVQ  189 (296)
T ss_pred             CCCCCHHHHHHHHHHHHHH-HHHHHHcCccccccchhceeec-------CCC------ceEEccccceeecccCcceeec
Confidence                111112233333333 6789999999999999999998       566      8999999998765433211100


Q ss_pred             HHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          505 EFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       505 ~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                         ......-.+.+.|.+.. +......|.++|+..+.+++.
T Consensus       190 ---~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~  227 (296)
T cd05051         190 ---GRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILT  227 (296)
T ss_pred             ---CcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHh
Confidence               00000112445555433 345566799999999988875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.33  E-value=2.5e-12  Score=134.12  Aligned_cols=130  Identities=12%  Similarity=0.040  Sum_probs=82.1

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK  481 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~  481 (581)
                      ...++||||++|+++.+++......   ......++..++.+ +..+|..|++|+|+||.||+++       .++     
T Consensus        72 ~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~-L~~LH~~~iiH~dlkp~Nil~~-------~~~-----  138 (327)
T cd08227          72 NELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKA-LDYIHHMGYVHRSVKASHILIS-------VDG-----  138 (327)
T ss_pred             CEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHH-HHHHHHCCEecCCCChhhEEEe-------cCC-----
Confidence            4457999999999999988542111   11112333333333 7889999999999999999998       666     


Q ss_pred             CeEEEEecccccccCHhh-HHHHHHHH-HHHHhhcHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          482 PHVIFLDVGMTAELSKTD-RVNLVEFF-KAVARRDGRTAAECTLRL-SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       482 ~~lvLiDFGl~~~L~~~~-r~~l~~l~-~Al~~~D~~~~~e~ll~l-~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                       ++++.|||....+.... ......-+ ......-.+.++|.+..- .......|.|+|+..+.+++.+.
T Consensus       139 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~  207 (327)
T cd08227         139 -KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH  207 (327)
T ss_pred             -cEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCC
Confidence             89999998755442211 11100000 000111224567776542 23445679999999999998773

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.33  E-value=7.6e-12  Score=124.81  Aligned_cols=118  Identities=14%  Similarity=0.021  Sum_probs=77.7

Q ss_pred             CcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCC
Q 008021          406 PAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP  482 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~  482 (581)
                      ..+++|||++|.+|.+++......   ......++..++.+ +..+|..|++|+|+||+||+++       .++      
T Consensus        72 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~a-l~~lH~~~~~H~dl~p~nili~-------~~~------  137 (254)
T cd05083          72 GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEG-MEYLESKKLVHRDLAARNILVS-------EDG------  137 (254)
T ss_pred             CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHH-HHHHHhCCeeccccCcceEEEc-------CCC------
Confidence            357999999999999998643221   11122344455544 6789999999999999999998       667      


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .++|+|||++..........        ...-.+.++|.+. .+......|.++|+..+.+++.
T Consensus       138 ~~kl~Dfg~~~~~~~~~~~~--------~~~~~y~~pe~~~-~~~~~~~~Dv~slG~~l~el~~  192 (254)
T cd05083         138 VAKVSDFGLARVGSMGVDNS--------KLPVKWTAPEALK-HKKFSSKSDVWSYGVLLWEVFS  192 (254)
T ss_pred             cEEECCCccceeccccCCCC--------CCCceecCHHHhc-cCCcCchhhHHHHHHHHHHHHh
Confidence            89999999887543221100        0011234444432 2334445688888888888765

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.33  E-value=6.3e-12  Score=127.08  Aligned_cols=122  Identities=19%  Similarity=0.166  Sum_probs=78.5

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK  481 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~  481 (581)
                      ...++||||+ +.++.+++.....   .......++..++.+ +..||..|++|+|++|+||+++       +++     
T Consensus        71 ~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~Lh~~~i~H~dl~~~ni~i~-------~~~-----  136 (283)
T cd07830          71 DELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQG-LAHIHKHGFFHRDLKPENLLVS-------GPE-----  136 (283)
T ss_pred             CcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHH-HHHHHHCCcccCCCChhhEEEc-------CCC-----
Confidence            3457999999 5577776654221   111223344444443 6788999999999999999999       666     


Q ss_pred             CeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       482 ~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .++|+|||.+..+.......      .......+.++|.+..-.......|.+.|+..+.+++.+
T Consensus       137 -~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g  195 (283)
T cd07830         137 -VVKIADFGLAREIRSRPPYT------DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTL  195 (283)
T ss_pred             -CEEEeecccceeccCCCCcC------CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhC
Confidence             89999999988765432110      001112334455443333344567889998888888765

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.33  E-value=1.4e-11  Score=122.30  Aligned_cols=188  Identities=14%  Similarity=0.098  Sum_probs=111.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.+|+|++|.||+|....+       |+.||+|+........                           ...    +  
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~~---------------------------~~~----~--   44 (265)
T cd08217           5 LETIGKGSFGTVRKVRRKSD-------GKILVWKEIDYGNMTE---------------------------KEK----Q--   44 (265)
T ss_pred             eeeeccCCCeEEEEeeecCC-------CCEEEEEEEecccCCH---------------------------HHH----H--
Confidence            46799999999999998764       6899999865321100                           000    0  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHI  439 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~  439 (581)
                          .+.+|...+.++.     +++  +++.+...    ....+++|||++|.+|.+++.....     .......++..
T Consensus        45 ----~~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~  113 (265)
T cd08217          45 ----QLVSEVNILRELK-----HPN--IVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQ  113 (265)
T ss_pred             ----HHHHHHHHHHhcC-----CCc--cceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHH
Confidence                1122333332221     122  12222111    1234799999999999998864211     11111233334


Q ss_pred             HHHHHHHHhh-----hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          440 GTHALLKMLL-----VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       440 ~i~a~l~~L~-----~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      ++.+ +..+|     ..|++|+|+||+||+++       .++      .++|+|||++..+......     ........
T Consensus       114 i~~~-l~~lH~~~~~~~~i~h~dl~p~nili~-------~~~------~~kl~d~g~~~~~~~~~~~-----~~~~~~~~  174 (265)
T cd08217         114 LLLA-LYECHNRSDPGNTVLHRDLKPANIFLD-------ANN------NVKLGDFGLAKILGHDSSF-----AKTYVGTP  174 (265)
T ss_pred             HHHH-HHHHhcCccccCcceecCCCHHHEEEe-------cCC------CEEEecccccccccCCccc-----ccccccCC
Confidence            4443 67788     88999999999999999       666      8999999999887654310     00111222


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.++|.+.. .......|.++|+..+.+++.+
T Consensus       175 ~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g  206 (265)
T cd08217         175 YYMSPEQLNH-MSYDEKSDIWSLGCLIYELCAL  206 (265)
T ss_pred             CccChhhhcC-CCCCchhHHHHHHHHHHHHHHC
Confidence            3344444322 2233456888888888777765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.33  E-value=2.5e-11  Score=125.67  Aligned_cols=195  Identities=16%  Similarity=0.159  Sum_probs=112.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+...........+..||+|+.+......                            ..       
T Consensus        17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~-------   61 (314)
T cd05099          17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDK----------------------------DL-------   61 (314)
T ss_pred             eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChH----------------------------HH-------
Confidence            5889999999999998642100000124689999876542110                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----------------c
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----------------H  429 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~  429 (581)
                         -++.+|.+-+.++    .+++++  .+.+.  ......+++|||++|.+|.+++.....                 .
T Consensus        62 ---~~~~~E~~~l~~l----~~h~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~  132 (314)
T cd05099          62 ---ADLISEMELMKLI----GKHKNI--INLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLS  132 (314)
T ss_pred             ---HHHHHHHHHHHhc----cCCCCe--eeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccC
Confidence               1123333323222    122222  22221  123345799999999999999864211                 0


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA  509 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~A  509 (581)
                      ......++..++.+ +..+|..|++|+|++|+||+++       .++      +++|+|||++..+.........  .. 
T Consensus       133 ~~~~~~~~~qi~~a-L~~lH~~gi~H~dlkp~Nill~-------~~~------~~kL~Dfg~~~~~~~~~~~~~~--~~-  195 (314)
T cd05099         133 FKDLVSCAYQVARG-MEYLESRRCIHRDLAARNVLVT-------EDN------VMKIADFGLARGVHDIDYYKKT--SN-  195 (314)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHCCeeeccccceeEEEc-------CCC------cEEEcccccccccccccccccc--cc-
Confidence            01112234444444 7889999999999999999998       666      8999999999876532211100  00 


Q ss_pred             HHhh-cHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          510 VARR-DGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       510 l~~~-D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       ... -.+.+.|.+.. +......|.++|+..+.+++.
T Consensus       196 -~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~  231 (314)
T cd05099         196 -GRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFT  231 (314)
T ss_pred             -CCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHh
Confidence             000 12445554432 334445677887777777664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.33  E-value=4.2e-12  Score=128.53  Aligned_cols=188  Identities=14%  Similarity=0.086  Sum_probs=110.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+.+.+       |+.||||+...+....                           +..       
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~-------~~~~~ik~~~~~~~~~---------------------------~~~-------   42 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLT-------GEIVALKKIRLETEDE---------------------------GVP-------   42 (283)
T ss_pred             heEecCCCCeEEEEEEEcCC-------CCEEEEEEeecccccc---------------------------cch-------
Confidence            36799999999999998764       6999999876442110                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                         -++.+|...+.++.     +++  +++.+..  .....+++|||+++ ++.+++.....   .......++..++++
T Consensus        43 ---~~~~~E~~~l~~l~-----~~~--iv~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  111 (283)
T cd07835          43 ---STAIREISLLKELN-----HPN--IVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQG  111 (283)
T ss_pred             ---hHHHHHHHHHHhcC-----CCC--ccCHhheeccCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHH
Confidence               01122333333221     111  2222211  12345799999965 78888755321   122223344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|+||+++       .++      .++|+|||++..+....+.....     .....+.++|.+.
T Consensus       112 -L~~lH~~~~~H~dl~p~nil~~-------~~~------~~~l~df~~~~~~~~~~~~~~~~-----~~~~~~~aPE~~~  172 (283)
T cd07835         112 -IAYCHSHRVLHRDLKPQNLLID-------REG------ALKLADFGLARAFGVPVRTYTHE-----VVTLWYRAPEILL  172 (283)
T ss_pred             -HHHHHHCCeeCCCCCHHHEEEc-------CCC------cEEEeecccccccCCCccccCcc-----ccccCCCCCceee
Confidence             7889999999999999999998       666      89999999987654322111000     0011223344332


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .-.......|.+.|+..+.+++++
T Consensus       173 ~~~~~~~~~Di~slG~~l~~l~~g  196 (283)
T cd07835         173 GSRQYSTPVDIWSIGCIFAEMVNR  196 (283)
T ss_pred             cCcccCcHHHHHHHHHHHHHHHhC
Confidence            222223446888888888888776

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.33  E-value=1.7e-11  Score=121.08  Aligned_cols=190  Identities=16%  Similarity=0.064  Sum_probs=112.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       +++||||+.......                               ++.... 
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~-------------------------------~~~~~~-   45 (258)
T cd08215           5 IKQIGKGSFGKVYLVRRKSD-------GKLYVLKEIDLSNMS-------------------------------EKERED-   45 (258)
T ss_pred             EeeeccCCCeEEEEEEEcCC-------CcEEEEEEeecccCC-------------------------------hHHHHH-
Confidence            46799999999999999764       689999986543111                               000011 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhh---c--chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ---G--HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~---~--~~~~~~~la~~~i~a  443 (581)
                           +..|.+.+.++.     .+++.-+..........+++|||++|.+|.+++....   .  .......++..++.+
T Consensus        46 -----~~~e~~~l~~l~-----~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~  115 (258)
T cd08215          46 -----ALNEVKILKKLN-----HPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLA  115 (258)
T ss_pred             -----HHHHHHHHHhcC-----CCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHH
Confidence                 122333332221     1221111111112245679999999999999886531   1  111112333333333


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|.||+++       .++      .++|+|||++........  ...   .......+.++|.+.
T Consensus       116 -l~~lh~~~~~H~dl~~~nil~~-------~~~------~~~l~d~~~~~~~~~~~~--~~~---~~~~~~~y~~pe~~~  176 (258)
T cd08215         116 -LKYLHSRKILHRDIKPQNIFLT-------SNG------LVKLGDFGISKVLSSTVD--LAK---TVVGTPYYLSPELCQ  176 (258)
T ss_pred             -HHHHHhCCEecccCChHHeEEc-------CCC------cEEECCccceeecccCcc--eec---ceeeeecccChhHhc
Confidence             6789999999999999999998       566      899999999887655430  000   001112234444432


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . .......|.+.++..+.+++.+
T Consensus       177 ~-~~~~~~~Dv~slG~~~~~l~~g  199 (258)
T cd08215         177 N-KPYNYKSDIWSLGCVLYELCTL  199 (258)
T ss_pred             c-CCCCccccHHHHHHHHHHHHcC
Confidence            2 2233457888888888777765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.33  E-value=3.1e-12  Score=150.09  Aligned_cols=205  Identities=14%  Similarity=0.120  Sum_probs=119.9

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      .+|+ .+.||.|++|.||+|+.+.+       ++.||+|+........                               .
T Consensus        13 ~~YeIl~kLG~GgFGtVYLAkdk~t-------g~~vAlKvIk~~~l~e-------------------------------~   54 (1021)
T PTZ00266         13 NEYEVIKKIGNGRFGEVFLVKHKRT-------QEFFCWKAISYRGLKE-------------------------------R   54 (1021)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCC-------CeEEEEEEEeccccCH-------------------------------H
Confidence            3444 57899999999999999865       6899999875431000                               0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhh-----cchhhHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQ-----GHERLKS  434 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~-----~~~~~~~  434 (581)
                      .      .-.|..|+..+.++.     +++  +.+.+..+    ...-+|||||++|.+|.+++....     .......
T Consensus        55 ~------~~~~~~EI~IL~~L~-----HPN--IVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il  121 (1021)
T PTZ00266         55 E------KSQLVIEVNVMRELK-----HKN--IVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIV  121 (1021)
T ss_pred             H------HHHHHHHHHHHHHcC-----CCC--cCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHH
Confidence            0      011233444444332     222  22222211    123479999999999999886421     1111112


Q ss_pred             HHHHHHHHHHHHHhhh-------CCeEecCCCCCCEEEeecccccc----cccccCCCCeEEEEecccccccCHhhHHHH
Q 008021          435 ALAHIGTHALLKMLLV-------DNFIHADMHPGNILVRVAQKKSS----QKRLFRSKPHVIFLDVGMTAELSKTDRVNL  503 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~-------~G~~H~DlHPGNILV~~~~~~~~----~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l  503 (581)
                      .++..++.+ |..||.       .+|+|+||||.|||+........    ..-.....+.++|+|||++..+....... 
T Consensus       122 ~Ia~QIL~A-LaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~-  199 (1021)
T PTZ00266        122 DITRQLLHA-LAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAH-  199 (1021)
T ss_pred             HHHHHHHHH-HHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccccc-
Confidence            344444443 677887       45999999999999972110000    00001123469999999988765432111 


Q ss_pred             HHHHHHHHhhcHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          504 VEFFKAVARRDGRTAAECTLRL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       504 ~~l~~Al~~~D~~~~~e~ll~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                           .......+.++|.+... .......|.|+|.+.+.+++.+
T Consensus       200 -----s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTG  239 (1021)
T PTZ00266        200 -----SCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG  239 (1021)
T ss_pred             -----ccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHC
Confidence                 11223356677777543 2344567999999999999887

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.33  E-value=4.3e-12  Score=143.27  Aligned_cols=158  Identities=22%  Similarity=0.300  Sum_probs=104.5

Q ss_pred             ChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchh--hHHHHHHHHHHHHHHhcccccccccC
Q 008021          279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE--SIRRDFVIINLAAKISSVIPAVKWLR  356 (581)
Q Consensus       279 ~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~--~i~~Dl~il~~la~~~~~~p~l~~l~  356 (581)
                      ++++.|+ | .+.||.|.+|+||+++.+++       |+.+||||++|+...  .|+.+..+++...    ..|      
T Consensus        16 dp~d~~e-i-~evig~Gtygkv~k~k~~~~-------~~~aa~kI~~~~~d~deEiE~eynil~~~~----~hp------   76 (953)
T KOG0587|consen   16 DPADIFE-I-IEVIGNGTYGKVYKGRHVKT-------GQLAAIKIMDPTEDEEEEIELEYNMLKKYS----HHP------   76 (953)
T ss_pred             CCCCccE-E-EEEEeeccceeEEEEeeeec-------CceeeeEeecCCccccHHHHHHHHHHHhcc----CCC------
Confidence            3445554 2 46799999999999999876       799999999998543  2222222222110    001      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHH
Q 008021          357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL  436 (581)
Q Consensus       357 l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~l  436 (581)
                                             |..+|...|...+        ..-...-+||||||.|+++.|+++...+.......+
T Consensus        77 -----------------------nv~~fyg~~~k~~--------~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~I  125 (953)
T KOG0587|consen   77 -----------------------NVATFYGAFIKKD--------PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWI  125 (953)
T ss_pred             -----------------------CcceEEEEEEEec--------CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHH
Confidence                                   1111111111000        011123479999999999999998755433333456


Q ss_pred             HHHHHHHH--HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh
Q 008021          437 AHIGTHAL--LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD  499 (581)
Q Consensus       437 a~~~i~a~--l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~  499 (581)
                      |-++.+++  +..||.+-++|||+|-.|||++       ..|      .|+|+|||....++...
T Consensus       126 aYI~re~lrgl~HLH~nkviHRDikG~NiLLT-------~e~------~VKLvDFGvSaQldsT~  177 (953)
T KOG0587|consen  126 AYILREILRGLAHLHNNKVIHRDIKGQNVLLT-------ENA------EVKLVDFGVSAQLDSTV  177 (953)
T ss_pred             HHHHHHHHHHHHHHhhcceeeecccCceEEEe-------ccC------cEEEeeeeeeeeeeccc
Confidence            66655554  5668889999999999999999       777      89999999999998764

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.33  E-value=1.2e-11  Score=123.89  Aligned_cols=124  Identities=19%  Similarity=0.193  Sum_probs=77.6

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ..++||||++|.+|.+++..... .......++..++.+ ++.+|..|++|+|+||.||+++       +++      .+
T Consensus        69 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a-l~~lH~~~i~H~dlkp~nill~-------~~~------~~  134 (257)
T cd05116          69 SWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMG-MKYLEETNFVHRDLAARNVLLV-------TQH------YA  134 (257)
T ss_pred             CcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHHCCEeecccchhhEEEc-------CCC------eE
Confidence            44799999999999998854221 122223444444444 7889999999999999999998       566      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +|+|||++..+............ . ...-.+.++|.+ ..+......|.++|+..+.++++
T Consensus       135 kl~Dfg~~~~~~~~~~~~~~~~~-~-~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~t  193 (257)
T cd05116         135 KISDFGLSKALGADENYYKAKTH-G-KWPVKWYAPECM-NYYKFSSKSDVWSFGVLMWEAFS  193 (257)
T ss_pred             EECCCccccccCCCCCeeeecCC-C-CCCccccCHhHh-ccCCcCchhHHHHHHHHHHHHHh
Confidence            99999998766433211000000 0 000112334433 22333445678888888777775

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.32  E-value=8.6e-12  Score=128.12  Aligned_cols=200  Identities=16%  Similarity=0.079  Sum_probs=111.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+     ..|+.||||+..+.....                          ++    +... 
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~-----~~~~~~alK~~~~~~~~~--------------------------~~----~~~~-   48 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNG-----KDGKEYAIKKFKGDKEQY--------------------------TG----ISQS-   48 (316)
T ss_pred             EEEeccCCcEEEEEEEecCC-----CCCCeEEEEEeccccccc--------------------------cC----ccHH-
Confidence            35699999999999999761     016999999987642100                          00    0000 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccC-CCCcEEEEeccCCccHHHHHHhhhc------chhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG------HERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~------~~~~~~~la~~~  440 (581)
                           +.+|+.-+.++.     ++++ .+...+..- ....++||||+++ ++.+++.....      .......++..+
T Consensus        49 -----~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi  117 (316)
T cd07842          49 -----ACREIALLRELK-----HENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQI  117 (316)
T ss_pred             -----HHHHHHHHHhcC-----CCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHH
Confidence                 112322222221     1111 111111111 1335799999987 45554432111      111112233333


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..+|..|++|+|++|.||+++.+.   ..+|      .++|+|||++..+.........  .......-.+.++|
T Consensus       118 ~~~-l~~lH~~~i~h~dlkp~Nil~~~~~---~~~~------~~kl~Dfg~~~~~~~~~~~~~~--~~~~~~~~~y~aPE  185 (316)
T cd07842         118 LNG-VHYLHSNWVLHRDLKPANILVMGEG---PERG------VVKIGDLGLARLFNAPLKPLAD--LDPVVVTIWYRAPE  185 (316)
T ss_pred             HHH-HHHHHhCCEeeCCCCHHHEEEcCCC---Cccc------eEEECCCccccccCCCcccccc--cCCccccccccCHH
Confidence            333 7789999999999999999998211   1255      8999999998866443221000  00001122345666


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+..........|.++|+..+.+++.+
T Consensus       186 ~~~~~~~~~~~~Dv~slG~~l~~l~~~  212 (316)
T cd07842         186 LLLGARHYTKAIDIWAIGCIFAELLTL  212 (316)
T ss_pred             HHhCCCCCCcHHHHHHHHHHHHHHHhc
Confidence            664433344567899999998888765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.32  E-value=2.4e-12  Score=148.36  Aligned_cols=190  Identities=19%  Similarity=0.224  Sum_probs=121.1

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ -+.||.|.||.|+..+.+.+       ++.+|.|+....         ..++.             .   +     
T Consensus        76 DfeilKvIGrGaFGEV~lVr~k~t-------~~VYAMK~lnK~---------eMlKr-------------~---~-----  118 (1317)
T KOG0612|consen   76 DFEILKVIGRGAFGEVALVRHKST-------EKVYAMKILNKW---------EMLKR-------------A---E-----  118 (1317)
T ss_pred             hhHHHHHhcccccceeEEEEeecc-------ccchhHHHhhHH---------HHhhc-------------h---h-----
Confidence            355 58899999999999999987       789999963221         00000             0   0     


Q ss_pred             HHHHHHHHHHHHHH--HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHH-----HH
Q 008021          365 AVFMMSQVDLAREA--AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA-----LA  437 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea--~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~-----la  437 (581)
                      .....+|-|..--+  .=+..+...|.+..++|             |||||++|+.|-.++....   ..+..     +|
T Consensus       119 tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY-------------lVMdY~pGGDlltLlSk~~---~~pE~~ArFY~a  182 (1317)
T KOG0612|consen  119 TACFREERDIMVFGNSEWIVQLHYAFQDERYLY-------------LVMDYMPGGDLLTLLSKFD---RLPEDWARFYTA  182 (1317)
T ss_pred             HHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE-------------EEEecccCchHHHHHhhcC---CChHHHHHHHHH
Confidence            01122233322211  23445566677777665             9999999999998876533   22333     33


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ++.  ..+..||.-|+||||+||.|||++       ..|      +|+|.|||.+-.++.+-.-   .--.|+..=|| -
T Consensus       183 EiV--lAldslH~mgyVHRDiKPDNvLld-------~~G------HikLADFGsClkm~~dG~V---~s~~aVGTPDY-I  243 (1317)
T KOG0612|consen  183 EIV--LALDSLHSMGYVHRDIKPDNVLLD-------KSG------HIKLADFGSCLKMDADGTV---RSSVAVGTPDY-I  243 (1317)
T ss_pred             HHH--HHHHHHHhccceeccCCcceeEec-------ccC------cEeeccchhHHhcCCCCcE---EeccccCCCCc-c
Confidence            332  347889999999999999999999       788      9999999998887643211   11122223332 2


Q ss_pred             HHHHHHhh----cCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRL----SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l----~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+|++..+    |.++..-|-|+++--|.+++-|
T Consensus       244 SPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG  277 (1317)
T KOG0612|consen  244 SPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYG  277 (1317)
T ss_pred             CHHHHHhhcCCccccCCccchhhhHHHHHHHHcC
Confidence            34444333    4455566888888888887644

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.32  E-value=1e-11  Score=129.69  Aligned_cols=195  Identities=16%  Similarity=0.087  Sum_probs=113.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+ ++    +..||||+........                           .    .    
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~-~~----~~~~aiK~~~~~~~~~---------------------------~----~----   44 (332)
T cd07857           5 IKELGQGAYGIVCSARNAET-SE----EETVAIKKITNVFSKK---------------------------I----L----   44 (332)
T ss_pred             EEEccccCCeEEEEEEeCCC-Cc----CceEEEEEeccccccc---------------------------h----h----
Confidence            46799999999999998752 11    5789999864321110                           0    0    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc------cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY------PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~------~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                        .-++.+|...+.++.    ++++  +++.+.      .-....+++|||+++ +|.+++..... .......++..++
T Consensus        45 --~~~~~~E~~~l~~l~----~h~~--iv~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~~~qi~  115 (332)
T cd07857          45 --AKRALRELKLLRHFR----GHKN--ITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIRSGQPLTDAHFQSFIYQIL  115 (332)
T ss_pred             --HHHHHHHHHHHHHhc----CCCC--hheeeeeeeeccccCCcEEEEEecccC-CHHHHHhcCCCCCHHHHHHHHHHHH
Confidence              011223444343332    1221  111111      111234689999875 77777643221 1122233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..+|..|++|+|+||+|||++       .++      .++|+|||++..+........... ........+.+.|.
T Consensus       116 ~a-L~~LH~~givH~dlkp~Nili~-------~~~------~~kl~Dfg~a~~~~~~~~~~~~~~-~~~~g~~~y~aPE~  180 (332)
T cd07857         116 CG-LKYIHSANVLHRDLKPGNLLVN-------ADC------ELKICDFGLARGFSENPGENAGFM-TEYVATRWYRAPEI  180 (332)
T ss_pred             HH-HHHHHhCCcccCCCCHHHeEEc-------CCC------CEEeCcCCCceecccccccccccc-cCcccCccccCcHH
Confidence            44 7889999999999999999998       666      899999999987654322110000 00111223566666


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +..........|.++++..+.+++.+
T Consensus       181 ~~~~~~~~~~~Di~slGv~l~~l~~g  206 (332)
T cd07857         181 MLSFQSYTKAIDVWSVGCILAELLGR  206 (332)
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            64433344567899998888888766

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.31  E-value=1.3e-11  Score=129.37  Aligned_cols=121  Identities=15%  Similarity=0.112  Sum_probs=81.4

Q ss_pred             cEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEE
Q 008021          407 AVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVI  485 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lv  485 (581)
                      .++||||++| +|.+++..... .......++..++.+ +..||..|++|+|++|.||+++       .++      .++
T Consensus        84 ~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qi~~a-L~~LH~~~i~H~dlkp~Nil~~-------~~~------~~k  148 (337)
T cd07858          84 VYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRG-LKYIHSANVLHRDLKPSNLLLN-------ANC------DLK  148 (337)
T ss_pred             EEEEEeCCCC-CHHHHHhcCCCCCHHHHHHHHHHHHHH-HHHHHhCCEecCCCCHHHEEEc-------CCC------CEE
Confidence            5799999975 67777654211 112223344444444 7789999999999999999998       666      899


Q ss_pred             EEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          486 FLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       486 LiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |+|||++........  +.   ........+.+.|.+..........|.++|+..+.+++.+
T Consensus       149 L~Dfg~~~~~~~~~~--~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g  205 (337)
T cd07858         149 ICDFGLARTTSEKGD--FM---TEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGR  205 (337)
T ss_pred             ECcCccccccCCCcc--cc---cccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcC
Confidence            999999886654321  00   0001122356677665434455678999999999998866

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.31  E-value=2.3e-11  Score=109.67  Aligned_cols=134  Identities=22%  Similarity=0.197  Sum_probs=91.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+++++|+++.||+++..         +..++||+..+...                                       
T Consensus         3 ~~~i~~g~~~~v~~~~~~---------~~~~~iK~~~~~~~---------------------------------------   34 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK---------DEDYVLKINPSREK---------------------------------------   34 (155)
T ss_pred             ceecccccccceEEEEec---------CCeEEEEecCCCCc---------------------------------------
Confidence            468999999999999984         36899998766521                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                        +.++..|...+.++.+.     ...+|+++....  ...+++|||++|.++..+  .    ......+.....+ .+.
T Consensus        35 --~~~~~~e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~--~----~~~~~~~~~~~~~-~l~  100 (155)
T cd05120          35 --GADREREVAILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEV--S----EEEKEDIAEQLAE-LLA  100 (155)
T ss_pred             --hhHHHHHHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccC--C----HHHHHHHHHHHHH-HHH
Confidence              12345566666666543     345666654333  367999999999988753  0    1112223333333 356


Q ss_pred             Hhhh---CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          447 MLLV---DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       447 ~L~~---~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      .+|.   .|++|+|+||+||+++       .++      .++++|||.+...++
T Consensus       101 ~lh~~~~~~i~H~Dl~~~Nil~~-------~~~------~~~l~Df~~~~~~~~  141 (155)
T cd05120         101 KLHQLPLLVLCHGDLHPGNILVD-------DGK------ILGIIDWEYAGYGPP  141 (155)
T ss_pred             HHhCCCceEEEecCCCcceEEEE-------CCc------EEEEEecccccCCCh
Confidence            6665   4899999999999998       455      899999999886554

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.31  E-value=1.6e-11  Score=126.73  Aligned_cols=194  Identities=14%  Similarity=0.118  Sum_probs=113.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|+||+|+....  .....+..||||+.+.......                                    
T Consensus        40 ~~~ig~G~~g~V~~~~~~~~--~~~~~~~~vavK~~~~~~~~~~------------------------------------   81 (302)
T cd05055          40 GKTLGAGAFGKVVEATAYGL--SKSDAVMKVAVKMLKPTAHSSE------------------------------------   81 (302)
T ss_pred             cceeeccCCeeEEEEEEecC--CCCCceeEEEEEecCccCChHH------------------------------------
Confidence            57899999999999986321  0111257899998665421100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                        .-++.+|.+.+.++.    +++++  .+.+  .......+++|||+.|.+|.+++.....   .......++..++.+
T Consensus        82 --~~~~~~E~~~l~~l~----~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~  153 (302)
T cd05055          82 --REALMSELKIMSHLG----NHENI--VNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKG  153 (302)
T ss_pred             --HHHHHHHHHHHHhcc----CCCCc--ceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence              012344554444431    12222  1121  1223456899999999999998864221   111223344444443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|+||+++       .++      .++++|||++..+...........   ......+.+.|.+.
T Consensus       154 -l~~lH~~~ivH~dlkp~Nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~~~~~---~~~~~~y~aPE~~~  216 (302)
T cd05055         154 -MAFLASKNCIHRDLAARNVLLT-------HGK------IVKICDFGLARDIMNDSNYVVKGN---ARLPVKWMAPESIF  216 (302)
T ss_pred             -HHHHHHCCeehhhhccceEEEc-------CCC------eEEECCCcccccccCCCceeecCC---CCcccccCCHhhhc
Confidence             7789999999999999999998       556      899999999886643321100000   00011233444432


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      . +......|.++|+..+.++++
T Consensus       217 ~-~~~~~~~DiwslGvil~el~t  238 (302)
T cd05055         217 N-CVYTFESDVWSYGILLWEIFS  238 (302)
T ss_pred             c-CCCCcHhHHHHHHHHHHHHHh
Confidence            2 233345677777777777764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.31  E-value=1.1e-11  Score=124.50  Aligned_cols=200  Identities=20%  Similarity=0.173  Sum_probs=114.0

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|.||+|+..+.. .....++.||||....+...                            +          
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~-~~~~~~~~~~iK~~~~~~~~----------------------------~----------   41 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDIL-GPGSGPIRVAVKTLRKGATD----------------------------Q----------   41 (269)
T ss_pred             CccccccceeEEeeeecccc-cCcccceeehhhhhhcccch----------------------------h----------
Confidence            36899999999999986521 00112478999975433110                            0          


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch--------hhHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE--------RLKSALAHIGT  441 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~--------~~~~~la~~~i  441 (581)
                      ...++.+|+..+.++     +++++.-..-+.......++||||++|.+|.+++.......        .....++..++
T Consensus        42 ~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~  116 (269)
T cd05044          42 EKKEFLKEAHLMSNF-----NHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVA  116 (269)
T ss_pred             hHHHHHHHHHHHHhc-----CCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHH
Confidence            001234455444433     12322211111222345689999999999999886421110        11122333333


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..+|..|++|+|++|.||+++....        +....++++|||++..+.........   ......-.+.+.|.
T Consensus       117 ~~-l~~lH~~~i~H~dl~p~nil~~~~~~--------~~~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~y~aPE~  184 (269)
T cd05044         117 KG-CVYLEQMHFIHRDLAARNCLVSEKGY--------DADRVVKIGDFGLARDIYKSDYYRKE---GEGLLPVRWMAPES  184 (269)
T ss_pred             HH-HHHHHhCCcccCCCChheEEEecCCC--------CCCcceEECCcccccccccccccccC---cccCCCccccCHHH
Confidence            33 67899999999999999999982110        11237999999998766433211000   00000112344555


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +.. +......|.++|+..+.++++
T Consensus       185 ~~~-~~~~~~~Dv~slG~il~ellt  208 (269)
T cd05044         185 LLD-GKFTTQSDVWSFGVLMWEILT  208 (269)
T ss_pred             Hcc-CCcccchhHHHHHHHHHHHHH
Confidence            432 445566799999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.31  E-value=2.6e-11  Score=122.79  Aligned_cols=120  Identities=16%  Similarity=0.081  Sum_probs=80.8

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      ...++||||++|.+|.+++..... .......++..++.+ +..+|..|++|+|++|.||++.       .++     .+
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~-l~~lH~~~i~H~dl~p~nil~~-------~~~-----~~  148 (267)
T PHA03390         82 KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEA-LNDLHKHNIIHNDIKLENVLYD-------RAK-----DR  148 (267)
T ss_pred             CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHhCCeeeCCCCHHHEEEe-------CCC-----Ce
Confidence            346899999999999999865321 222223344444444 7889999999999999999998       322     17


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++++|||++..++.....         .....+.++|.+.. .......|.|+|+..+.+++.+
T Consensus       149 ~~l~dfg~~~~~~~~~~~---------~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g  202 (267)
T PHA03390        149 IYLCDYGLCKIIGTPSCY---------DGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTG  202 (267)
T ss_pred             EEEecCccceecCCCccC---------CCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHC
Confidence            999999998876543211         01123445555533 3344456888888888888776

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.31  E-value=3.8e-11  Score=121.25  Aligned_cols=119  Identities=18%  Similarity=0.111  Sum_probs=79.2

Q ss_pred             cEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          407 AVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      .+++|||++| ++.+++.....   .......++..++.+ +..||..|++|+|++|+||+++       .++      .
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~a-l~~LH~~~i~h~~l~~~nili~-------~~~------~  145 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRG-VDFLHSHRIVHRDLKPQNILVT-------SDG------Q  145 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHH-HHHHHHCCeeeccCChhhEEEc-------cCC------C
Confidence            5799999987 68777754222   111223344444444 7889999999999999999999       666      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++..++......      .....-.+.+.|.+.. .......|.++|+..+.+++++
T Consensus       146 ~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~  202 (287)
T cd07838         146 VKIADFGLARIYSFEMALT------SVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRR  202 (287)
T ss_pred             EEEeccCcceeccCCcccc------cccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhC
Confidence            9999999987765432110      0001112344555433 3344567999999999998866

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.31  E-value=2.8e-11  Score=125.61  Aligned_cols=196  Identities=23%  Similarity=0.211  Sum_probs=115.4

Q ss_pred             hCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccccccc
Q 008021          276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWL  355 (581)
Q Consensus       276 lG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l  355 (581)
                      ++.+++++|..+.  .||.|++|.||+|+...+       |+.|+||+........                        
T Consensus        15 ~~~~~~~~~~~~~--~lg~g~~g~v~~~~~~~~-------~~~v~ik~~~~~~~~~------------------------   61 (313)
T cd06633          15 YKDDPEEIFVGLH--EIGHGSFGAVYFATNSHT-------NEVVAVKKMSYSGKQT------------------------   61 (313)
T ss_pred             ccCCHHHHhhcce--eeccCCCeEEEEEEECCC-------CcEEEEEEEeccccCc------------------------
Confidence            4567788876544  499999999999998764       6999999865431100                        


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc--hh
Q 008021          356 RLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH--ER  431 (581)
Q Consensus       356 ~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~  431 (581)
                        .+.          ..++.+|...+.++.     +++  ++..+.  ......++||||+.| ++.+++......  ..
T Consensus        62 --~~~----------~~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~  121 (313)
T cd06633          62 --NEK----------WQDIIKEVKFLQQLK-----HPN--TIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEV  121 (313)
T ss_pred             --hHH----------HHHHHHHHHHHHhCC-----CCC--CccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCHH
Confidence              000          012233444443331     122  122221  122345799999987 455555331111  11


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ....++..++.+ +..+|..|++|+|++|+||+++       .++      .++|+|||++.........         .
T Consensus       122 ~~~~~~~qi~~a-l~~LH~~gi~H~dl~p~nili~-------~~~------~~kL~dfg~~~~~~~~~~~---------~  178 (313)
T cd06633         122 EIAAITHGALQG-LAYLHSHNMIHRDIKAGNILLT-------EPG------QVKLADFGSASKSSPANSF---------V  178 (313)
T ss_pred             HHHHHHHHHHHH-HHHHHHCCeecCCCChhhEEEC-------CCC------CEEEeecCCCcccCCCCCc---------c
Confidence            112233334433 7889999999999999999998       666      8999999988654332210         1


Q ss_pred             hhcHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHhhhH
Q 008021          512 RRDGRTAAECTLRL--SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       512 ~~D~~~~~e~ll~l--~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....+.++|.+...  +......|.++|+..+.++..+
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g  216 (313)
T cd06633         179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  216 (313)
T ss_pred             ccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhC
Confidence            11234555554322  2233456888888888877655

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.31  E-value=2e-11  Score=123.29  Aligned_cols=125  Identities=20%  Similarity=0.129  Sum_probs=76.4

Q ss_pred             CcEEEEeccCCccHHHHHHhhhcc-h----hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCC
Q 008021          406 PAVLVETYEQGECVSRYVDELQGH-E----RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS  480 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~~-~----~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~  480 (581)
                      ..++||||++|++|.+++...... .    .....++..++.+ +..+|..|++|+|+||.|||++       .++    
T Consensus        69 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~a-l~~lH~~~i~H~dikp~nil~~-------~~~----  136 (268)
T cd05086          69 PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAG-VTHMHKHNFLHSDLALRNCFLT-------SDL----  136 (268)
T ss_pred             ccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHH-HHHHHHCCeeccCCccceEEEc-------CCc----
Confidence            457999999999999988642211 0    1112233334433 7789999999999999999998       666    


Q ss_pred             CCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh------cCCCCCCCHHHHHHHHHHhhhH
Q 008021          481 KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL------SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       481 ~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l------~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                        .++|+|||++............   ........+.+.|.+...      .......|.++|+..+.+++.+
T Consensus       137 --~~~l~Dfg~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~  204 (268)
T cd05086         137 --TVKVGDYGIGPSRYKEDYIETE---DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFEN  204 (268)
T ss_pred             --cEEecccccccccCcchhhhcc---cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhC
Confidence              8999999987543221110000   000001123445544221      1123456889998888888753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.30  E-value=9.3e-12  Score=126.62  Aligned_cols=123  Identities=14%  Similarity=0.073  Sum_probs=78.4

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          406 PAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      ...++|||++|++|.+++.....  .......++..++.+ +..+|..|++|+|++|.||+++       .++      +
T Consensus        82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~-l~~lH~~~iiH~dlkp~nili~-------~~~------~  147 (279)
T cd05111          82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKG-MYYLEEHRMVHRNLAARNILLK-------SDS------I  147 (279)
T ss_pred             ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHH-HHHHHHCCEeccccCcceEEEc-------CCC------c
Confidence            34689999999999999864222  112223344444443 7789999999999999999998       666      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ++|+|||++..+.+.........   ....-.+.+.|.+. .+......|.++|+..+.++++
T Consensus       148 ~kl~Dfg~~~~~~~~~~~~~~~~---~~~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~el~t  206 (279)
T cd05111         148 VQIADFGVADLLYPDDKKYFYSE---HKTPIKWMALESIL-FGRYTHQSDVWSYGVTVWEMMS  206 (279)
T ss_pred             EEEcCCccceeccCCCcccccCC---CCCcccccCHHHhc-cCCcCchhhHHHHHHHHHHHHc
Confidence            99999999986654332211100   00001233344432 2334455688888888877765

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.30  E-value=2.2e-11  Score=131.96  Aligned_cols=84  Identities=14%  Similarity=0.167  Sum_probs=52.7

Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHH-HHHHHHHHHHhhcHHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRV-NLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~-~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                      +..+|..|++|+|++|.|||++       .++      .++|+|||++..+...... .....    ...-.+.+.|.+.
T Consensus       252 L~~LH~~~ivHrdlkp~NiLl~-------~~~------~~kL~DfGla~~~~~~~~~~~~~~~----~~~~~y~aPE~~~  314 (401)
T cd05107         252 MEFLASKNCVHRDLAARNVLIC-------EGK------LVKICDFGLARDIMRDSNYISKGST----FLPLKWMAPESIF  314 (401)
T ss_pred             HHHHhcCCcCcccCCcceEEEe-------CCC------EEEEEecCcceecccccccccCCCc----CCCCceeChHHhc
Confidence            6789999999999999999998       566      8999999998765322110 00000    0001133344432


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      . +......|.++|+..+.+++.
T Consensus       315 ~-~~~~~~~DvwslGvil~e~l~  336 (401)
T cd05107         315 N-NLYTTLSDVWSFGILLWEIFT  336 (401)
T ss_pred             C-CCCCcHhHHHHHHHHHHHHHH
Confidence            2 333345677777777777664

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.30  E-value=3e-12  Score=130.50  Aligned_cols=218  Identities=16%  Similarity=0.148  Sum_probs=132.4

Q ss_pred             hhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          281 SEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       281 ~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      +++|. ++ -.-||+|.+|.||+|..+++ .+  ....+.|||-..-.-                         .     
T Consensus        21 e~l~~-ye~ig~Ig~GTYG~VykA~~~~~-n~--kr~k~yAiKkfk~~k-------------------------d-----   66 (438)
T KOG0666|consen   21 EDLFE-YEGIGKIGRGTYGKVYKAVRKNT-ND--KRTKEYAIKKFKGEK-------------------------D-----   66 (438)
T ss_pred             HHHHH-hhccceecccccceeeEeeeccC-Cc--ccchhhHHHHHhccC-------------------------C-----
Confidence            34443 44 45699999999999987764 11  012366776422110                         0     


Q ss_pred             HHHHHHHHHHHHHHHHHHHH--HHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHH
Q 008021          360 SVQQFAVFMMSQVDLAREAA--HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA  437 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~--nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la  437 (581)
                       -..++.+..+|+-+.+|.+  |+..+.+.|-.            ....-.|+.||.|- .|-+.+.-......  ..+-
T Consensus        67 -~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~------------~d~~v~l~fdYAEh-DL~~II~fHr~~~~--~~lp  130 (438)
T KOG0666|consen   67 -GTGISMSACREIALLRELKHPNVISLVKVFLS------------HDKKVWLLFDYAEH-DLWHIIKFHRASKA--KQLP  130 (438)
T ss_pred             -CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc------------cCceEEEEehhhhh-hHHHHHHHhccchh--ccCC
Confidence             0122334556666777754  45444444322            11222489999875 45555543211110  1222


Q ss_pred             HHHHHHH-------HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          438 HIGTHAL-------LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       438 ~~~i~a~-------l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      ...++.+       +..||.+=++||||||.||||..+.|   +.|      +++|.|+|+++.+..        .+.-+
T Consensus       131 ~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgp---erG------~VKIaDlGlaR~~~~--------plkpl  193 (438)
T KOG0666|consen  131 RSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGP---ERG------RVKIADLGLARLFNN--------PLKPL  193 (438)
T ss_pred             HHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCC---ccC------eeEeecccHHHHhhc--------ccccc
Confidence            2222222       45577888999999999999994333   446      999999999876432        22333


Q ss_pred             Hhhc------HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH--hh---------ccccHHHHHHHHHHHH
Q 008021          511 ARRD------GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG--VL---------RRVIWSILLSACSNYL  565 (581)
Q Consensus       511 ~~~D------~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~--~~---------~~~~~~~ll~~~~~~l  565 (581)
                      ...|      ++++.|+++..-.+...+|.|+..|..+||++-  .|         ++..-.+.+.+++++|
T Consensus       194 ~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vL  265 (438)
T KOG0666|consen  194 ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVL  265 (438)
T ss_pred             ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHc
Confidence            3444      689999999988888999999999999998754  11         1133455666666665

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.30  E-value=1.9e-11  Score=124.63  Aligned_cols=196  Identities=17%  Similarity=0.157  Sum_probs=113.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|..+..  +.......||+|+.+.+....   +                                 
T Consensus        17 ~~~ig~g~~g~v~~~~~~~~--~~~~~~~~~a~k~~~~~~~~~---~---------------------------------   58 (293)
T cd05053          17 GKPLGEGAFGQVVKAEAVGL--DNPNETSTVAVKMLKDDATEK---D---------------------------------   58 (293)
T ss_pred             eeEecccccccEEEEEEecC--CCCCCceeEEEEEccCCCCHH---H---------------------------------
Confidence            47899999999999998643  111224789999876542110   0                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-----------------chh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-----------------HER  431 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~~~  431 (581)
                        ..++.+|...+.++.    +++++.--.-+.......+++|||++|.+|.+++.....                 ...
T Consensus        59 --~~~~~~E~~~l~~l~----~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  132 (293)
T cd05053          59 --LSDLVSEMEMMKMIG----KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQK  132 (293)
T ss_pred             --HHHHHHHHHHHHhhc----CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHH
Confidence              012233443333331    122221111111223445899999999999999854210                 001


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ....++..++.+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+..........-   ..
T Consensus       133 ~~~~i~~qi~~a-l~~LH~~~ivH~dlkp~Nil~~-------~~~------~~kL~Dfg~~~~~~~~~~~~~~~~---~~  195 (293)
T cd05053         133 DLVSFAYQVARG-MEFLASKKCIHRDLAARNVLVT-------EDH------VMKIADFGLARDIHHIDYYRKTTN---GR  195 (293)
T ss_pred             HHHHHHHHHHHH-HHHHHHCCccccccceeeEEEc-------CCC------eEEeCccccccccccccceeccCC---CC
Confidence            112244444443 7889999999999999999998       667      899999999886643221000000   00


Q ss_pred             hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          512 RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..-.+.++|.+.. .......|.++|+..+.+++.
T Consensus       196 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~  229 (293)
T cd05053         196 LPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFT  229 (293)
T ss_pred             CCccccCHHHhcc-CCcCcccceeehhhHHHHHhc
Confidence            0012345554432 233345688888888888764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.30  E-value=2.3e-11  Score=120.54  Aligned_cols=186  Identities=14%  Similarity=0.025  Sum_probs=110.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+++.+.+       |+.+|||+........                           ..        
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~~~---------------------------~~--------   42 (256)
T cd08530           5 LKKLGKGSYGSVYKVKRLSD-------NQFYALKEVDLGSMSQ---------------------------KE--------   42 (256)
T ss_pred             eeeecCCCceeEEEEEECCC-------CCEEEEEEEehhhccH---------------------------HH--------
Confidence            46799999999999998764       6899999865431100                           00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhH---HHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLK---SALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~---~~la~~~i  441 (581)
                        ..++.+|...+.++.     .++  +++.+..  .....++||||++|.+|.+++.....  .....   ..++..++
T Consensus        43 --~~~~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~  113 (256)
T cd08530          43 --REDAVNEIRILASVN-----HPN--IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLL  113 (256)
T ss_pred             --HHHHHHHHHHHHhCC-----CCC--chhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence              011122332222211     111  2222211  22456799999999999998755211  11111   23333344


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..........       ......+..+|.
T Consensus       114 ~a-l~~lh~~~i~h~~l~~~ni~~~-------~~~------~~kl~d~g~~~~~~~~~~~~-------~~~~~~~~~Pe~  172 (256)
T cd08530         114 RG-LQALHEQKILHRDLKSANILLV-------AND------LVKIGDLGISKVLKKNMAKT-------QIGTPHYMAPEV  172 (256)
T ss_pred             HH-HHHHhhCCcccCCCCcceEEEe-------cCC------cEEEeeccchhhhccCCccc-------ccCCccccCHHH
Confidence            33 6788999999999999999999       566      89999999987665431111       011112333444


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. .......|.++++..+.+++.+
T Consensus       173 ~~~-~~~~~~~D~~slG~~~~~l~~g  197 (256)
T cd08530         173 WKG-RPYSYKSDIWSLGCLLYEMATF  197 (256)
T ss_pred             HCC-CCCCchhhHHHHHHHHHHHHhC
Confidence            322 2233456888888888777665

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.30  E-value=1.5e-11  Score=125.41  Aligned_cols=147  Identities=19%  Similarity=0.200  Sum_probs=91.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+....  .+...+..|++|+.+.+....                                     
T Consensus         5 ~~~lg~g~~g~vy~~~~~~~--~~~~~~~~~~~k~~~~~~~~~-------------------------------------   45 (290)
T cd05045           5 GKTLGEGEFGKVVKATAFRL--KGRAGYTTVAVKMLKENASSS-------------------------------------   45 (290)
T ss_pred             cccccCcCCcceEEEEEecC--CCCCcceeEEEEecCCCCCHH-------------------------------------
Confidence            46789999999999987532  101124689999876542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc-----------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH-----------------  429 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------------  429 (581)
                       ..-++.+|...+.++.     ++++  .+.+.  ......+++|||++|.+|.+++......                 
T Consensus        46 -~~~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  117 (290)
T cd05045          46 -ELRDLLSEFNLLKQVN-----HPHV--IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLD  117 (290)
T ss_pred             -HHHHHHHHHHHHhhCC-----CCCE--eeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCcccccccccccccccccc
Confidence             0012334444333331     2222  22221  2334568999999999999987542100                 


Q ss_pred             --------hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          430 --------ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       430 --------~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                              ......++..++.+ ++.||..|++|+|++|.||+++       .++      .++|+|||++..+.
T Consensus       118 ~~~~~~l~~~~~~~i~~~i~~~-l~~LH~~~ivH~dikp~nill~-------~~~------~~kl~dfg~~~~~~  178 (290)
T cd05045         118 NPDERALTMGDLISFAWQISRG-MQYLAEMKLVHRDLAARNVLVA-------EGR------KMKISDFGLSRDVY  178 (290)
T ss_pred             CccccccCHHHHHHHHHHHHHH-HHHHHHCCeehhhhhhheEEEc-------CCC------cEEecccccccccc
Confidence                    00011233333333 7889999999999999999998       666      89999999987653

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.30  E-value=1e-11  Score=129.07  Aligned_cols=125  Identities=18%  Similarity=0.150  Sum_probs=81.2

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      .-+++|||+++ +|.+++..... .......++..++.+ +..||..|++|+|+||+||+++       .++      .+
T Consensus        78 ~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~-l~~LH~~gi~H~dlkp~nili~-------~~~------~~  142 (330)
T cd07834          78 DVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRG-LKYLHSANVIHRDLKPSNILVN-------SNC------DL  142 (330)
T ss_pred             ceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEc-------CCC------CE
Confidence            34799999986 78877654211 111123344444444 6789999999999999999999       667      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++..........  ...........+.+.|.+..........|.++|+..+.+++.+
T Consensus       143 ~L~dfg~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g  203 (330)
T cd07834         143 KICDFGLARGVDPDEDEK--GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTR  203 (330)
T ss_pred             EEcccCceEeeccccccc--ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcC
Confidence            999999998776543110  0000011122345555554433444567999999999888876

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.29  E-value=4e-11  Score=119.45  Aligned_cols=187  Identities=14%  Similarity=0.070  Sum_probs=115.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC-chhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG-VGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~-v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      .+.||+|++|.||+++...+       |+.||||..... ...                            .        
T Consensus         5 ~~~lg~g~~g~~~~~~~~~~-------~~~~~ik~~~~~~~~~----------------------------~--------   41 (256)
T cd08218           5 VKKIGEGSFGKAILVKSKED-------GKQYVIKEINISKMSP----------------------------K--------   41 (256)
T ss_pred             EEEeccCCceEEEEEEEcCC-------CCEEEEEEEEhHhCCh----------------------------H--------
Confidence            47899999999999999764       689999975321 000                            0        


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTH  442 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~  442 (581)
                        ..-++.+|...+.++.     +++  +++.+.  ......++||||++|.+|.+++.....   .......++..++.
T Consensus        42 --~~~~~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~  112 (256)
T cd08218          42 --EREESRKEVAVLSNMK-----HPN--IVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICL  112 (256)
T ss_pred             --HHHHHHHHHHHHHhCC-----CCC--eeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence              0012233433333331     122  222222  223456899999999999998754221   11112233444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..+|..|++|+|++|.||+++       .++      .++++|||++..+.......     ........+.+.|.+
T Consensus       113 ~-l~~lh~~~i~h~~l~~~nil~~-------~~~------~~~l~d~~~~~~~~~~~~~~-----~~~~~~~~~~~pe~~  173 (256)
T cd08218         113 A-LKHVHDRKILHRDIKSQNIFLT-------KDG------TIKLGDFGIARVLNSTVELA-----RTCIGTPYYLSPEIC  173 (256)
T ss_pred             H-HHHHHhCCEecCCCCHHHEEEc-------CCC------CEEEeeccceeecCcchhhh-----hhccCCccccCHHHh
Confidence            4 6779999999999999999998       566      89999999988765432211     001111223445554


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. .......|.+.|+..+.+++.+
T Consensus       174 ~~-~~~~~~~Dv~slG~i~~~l~~g  197 (256)
T cd08218         174 EN-RPYNNKSDIWALGCVLYEMCTL  197 (256)
T ss_pred             CC-CCCCCccchhHHHHHHHHHHcC
Confidence            32 3334467999999998888766

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.29  E-value=9.1e-12  Score=130.04  Aligned_cols=203  Identities=17%  Similarity=0.078  Sum_probs=114.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|..+.+       |+.||||+...........+   .+                  ..+.    ..
T Consensus        14 ~~~ig~G~~g~vy~~~~~~~-------~~~vaiK~~~~~~~~~~~~~---~~------------------~~~~----~~   61 (335)
T PTZ00024         14 GAHLGEGTYGKVEKAYDTLT-------GKIVAIKKVKIIEISNDVTK---DR------------------QLVG----MC   61 (335)
T ss_pred             hhcccCCCceeEEEEEECCC-------CCeEEEEEeecccccccccc---ch------------------hhhc----cc
Confidence            35799999999999998764       69999998754311100000   00                  0000    00


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                      ..+.++.+|.+.+.++.     ++++.-..-+.......++||||++| ++.+++..... .......++..++.+ +..
T Consensus        62 ~~~~~~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~a-L~~  134 (335)
T PTZ00024         62 GIHFTTLRELKIMNEIK-----HENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNG-LNV  134 (335)
T ss_pred             ccchhHHHHHHHHHhCC-----CcceeeeeEEEecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHH-HHH
Confidence            00122334444444332     12221111111122345799999987 67777653211 112223344444444 788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh-------------HHHHHHHHHHHHhhc
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD-------------RVNLVEFFKAVARRD  514 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~-------------r~~l~~l~~Al~~~D  514 (581)
                      +|..|++|+|++|+||+++       .++      .++|+|||++..+....             +....    .-....
T Consensus       135 LH~~~i~H~dl~~~nill~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  197 (335)
T PTZ00024        135 LHKWYFMHRDLSPANIFIN-------SKG------ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMT----SKVVTL  197 (335)
T ss_pred             HHhCCeecccccHHHeEEC-------CCC------CEEECCccceeeccccccccccccccccccccccc----cccccc
Confidence            9999999999999999998       666      89999999987664110             00000    000112


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.+.|.+..........|.++++..+.+++.+
T Consensus       198 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg  230 (335)
T PTZ00024        198 WYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG  230 (335)
T ss_pred             CCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC
Confidence            234455543322234456899999999998876

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.29  E-value=1.8e-11  Score=128.76  Aligned_cols=125  Identities=12%  Similarity=0.107  Sum_probs=79.9

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEE
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIF  486 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvL  486 (581)
                      .++||||+++ +|.+++............++..++.+ +..||..|++|+|+||+||+++.      .++      .+++
T Consensus        91 ~~lv~e~~~~-~L~~~~~~~~l~~~~~~~~~~qi~~a-L~~LH~~givH~dikp~Nili~~------~~~------~~kl  156 (342)
T cd07854          91 VYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRG-LKYIHSANVLHRDLKPANVFINT------EDL------VLKI  156 (342)
T ss_pred             EEEEeecccc-cHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHhCCcccCCCCHHHEEEcC------CCc------eEEE
Confidence            4699999986 78777653222222223344444444 77899999999999999999971      233      7899


Q ss_pred             EecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       487 iDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|||++..++......  ...........+.+.|.+..-.......|.++|+..+.+++.+
T Consensus       157 ~dfg~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g  215 (342)
T cd07854         157 GDFGLARIVDPHYSHK--GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG  215 (342)
T ss_pred             CCcccceecCCccccc--cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhC
Confidence            9999987664322110  0000001122456677664433344567999999999998866

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.29  E-value=7e-12  Score=128.32  Aligned_cols=126  Identities=11%  Similarity=0.091  Sum_probs=78.9

Q ss_pred             cEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          407 AVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      -++||||+++. +.+.+.....  .......++..++++ +..+|..|++|+|++|+||+++       +++      .+
T Consensus        90 ~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~a-l~~lH~~~i~H~dl~p~nil~~-------~~~------~~  154 (311)
T cd07866          90 VYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEG-INYLHENHILHRDIKAANILID-------NQG------IL  154 (311)
T ss_pred             EEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEC-------CCC------CE
Confidence            37999999874 5444432111  111122344444444 7789999999999999999998       677      89


Q ss_pred             EEEecccccccCHhhHHHH------HHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNL------VEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l------~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|+|||++...........      ...+.+......+.++|.+..-.......|.++|+..+.+++.+
T Consensus       155 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g  223 (311)
T cd07866         155 KIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTR  223 (311)
T ss_pred             EECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhC
Confidence            9999999876543321100      00011111122355667665433345567999999999998876

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.29  E-value=1.7e-11  Score=143.01  Aligned_cols=189  Identities=20%  Similarity=0.233  Sum_probs=128.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|.||.||+|+..+. +|... ...||||...+.-.                                      .
T Consensus       697 ~~~lG~G~FG~VY~g~~~~~-~~~~~-~~~vaiK~l~~~~~--------------------------------------~  736 (1025)
T KOG1095|consen  697 LRVLGKGAFGEVYEGTYSDV-PGSVS-PIQVAVKSLKRLSS--------------------------------------E  736 (1025)
T ss_pred             eeeeccccccceEEEEEecC-CCCcc-ceEEEEEeccccCC--------------------------------------H
Confidence            57899999999999999863 44211 34588887655411                                      2


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccCCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i~  442 (581)
                      .++.||.+||..+..|.     +++| ..--+-. ...+..+++||++|+.|..|+++...     ....-.++....++
T Consensus       737 ~~~~~Fl~Ea~~m~~f~-----HpNiv~liGv~l-~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~d  810 (1025)
T KOG1095|consen  737 QEVSDFLKEALLMSKFD-----HPNIVSLIGVCL-DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALD  810 (1025)
T ss_pred             HHHHHHHHHHHHHhcCC-----CcceeeEEEeec-CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHH
Confidence            35688999999997764     2222 1111111 25677899999999999999987421     11122344444444


Q ss_pred             H--HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH----
Q 008021          443 A--LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR----  516 (581)
Q Consensus       443 a--~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~----  516 (581)
                      .  -++.|.+.+||||||-.-|.|++       ...      .+++.||||++.+.+.+..          +.+++    
T Consensus       811 vA~G~~YLe~~~fvHRDLAaRNCLL~-------~~r------~VKIaDFGlArDiy~~~yy----------r~~~~a~lP  867 (1025)
T KOG1095|consen  811 VAKGMNYLESKHFVHRDLAARNCLLD-------ERR------VVKIADFGLARDIYDKDYY----------RKHGEAMLP  867 (1025)
T ss_pred             HhhhhHHHHhCCCcCcchhhhheeec-------ccC------cEEEcccchhHhhhhchhe----------eccCccccc
Confidence            3  37778899999999999999999       445      8999999999854332210          11121    


Q ss_pred             ---HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 ---TAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ---~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                         -+.|.+.+ +......|.|+|.--+-|+++.
T Consensus       868 vkWm~PEsl~d-~iFtskSDvWsFGVllWEifsl  900 (1025)
T KOG1095|consen  868 VKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSL  900 (1025)
T ss_pred             eecCCHHHHhh-cccccccchhhhHHHHHHHHhC
Confidence               13456655 5566688999999999999865

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.28  E-value=2.9e-11  Score=121.95  Aligned_cols=192  Identities=16%  Similarity=0.145  Sum_probs=112.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||.|++|.||+|+.+.+  ++....+.|++|+....-.+                            +..       
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~--~~~~~~~~~~~k~~~~~~~~----------------------------~~~-------   52 (275)
T cd05046          10 ITTLGRGEFGEVFLAKAKGI--EEEGGETLVLVKALQKTKDE----------------------------NLQ-------   52 (275)
T ss_pred             eeeecccceeEEEEEEeccC--CcCCCcceEEEEccCCccch----------------------------HHH-------
Confidence            45699999999999998653  11223578999975432110                            001       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc----------chhhHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG----------HERLKSAL  436 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~----------~~~~~~~l  436 (581)
                         -++.+|++.+.++.     ++++  ++.+.  ......++||||++|.+|.+++.....          .......+
T Consensus        53 ---~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~  122 (275)
T cd05046          53 ---SEFRRELDMFRKLS-----HKNV--VRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL  122 (275)
T ss_pred             ---HHHHHHHHHHHhcC-----Ccce--eeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHH
Confidence               12344555555442     1221  22221  122346899999999999999864321          11111223


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      ...++.+ ++.+|..|++|+|++|.||+++       .++      .+++.|||++..............    .....+
T Consensus       123 ~~~l~~~-l~~LH~~~i~H~dlkp~Nili~-------~~~------~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~y  184 (275)
T cd05046         123 CTQIALG-MDHLSNARFVHRDLAARNCLVS-------SQR------EVKVSLLSLSKDVYNSEYYKLRNA----LIPLRW  184 (275)
T ss_pred             HHHHHHH-HHHhhhcCcccCcCccceEEEe-------CCC------cEEEcccccccccCcccccccCCc----eeEEee
Confidence            3344433 7889999999999999999998       666      899999998765432211110000    000113


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .++|.+.. +......|.++|+..+.+++.
T Consensus       185 ~~PE~~~~-~~~~~~~Di~slG~~l~~l~~  213 (275)
T cd05046         185 LAPEAVQE-DDFSTKSDVWSFGVLMWEVFT  213 (275)
T ss_pred             cChhhhcc-CCCCchhhHHHHHHHHHHHHh
Confidence            44444322 233345688888888888775

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.28  E-value=3.9e-11  Score=120.77  Aligned_cols=193  Identities=19%  Similarity=0.238  Sum_probs=111.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|.+|.||+|+.+.+  |  ..+..||||..+++....                                     
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~--~--~~~~~~~ik~~~~~~~~~-------------------------------------   47 (267)
T cd05066           9 EKVIGAGEFGEVCSGRLKLP--G--KREIPVAIKTLKAGYTEK-------------------------------------   47 (267)
T ss_pred             eeeecccCCCceEEEEEecC--C--CCceEEEEEECCCCCCHH-------------------------------------
Confidence            57899999999999998643  1  013579999876542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-cccccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l  445 (581)
                       ..-+|.+|...+.++.     ++++. +.. +.......++||||++|.+|.+++......  ......++..++.+ +
T Consensus        48 -~~~~~~~e~~~l~~l~-----h~~i~~~~~-~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~-l  119 (267)
T cd05066          48 -QRRDFLSEASIMGQFD-----HPNIIHLEG-VVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASG-M  119 (267)
T ss_pred             -HHHHHHHHHHHHHhCC-----CCCcceEEE-EEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-H
Confidence             0112344444443331     22221 111 112234568999999999999998653221  11112233333433 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||.||+++       .++      +++|+|||++..+......... . ......-.+.+.|.+.. 
T Consensus       120 ~~lH~~~i~h~dlkp~nili~-------~~~------~~~l~dfg~~~~~~~~~~~~~~-~-~~~~~~~~y~~pe~~~~-  183 (267)
T cd05066         120 KYLSDMGYVHRDLAARNILVN-------SNL------VCKVSDFGLSRVLEDDPEAAYT-T-RGGKIPIRWTAPEAIAY-  183 (267)
T ss_pred             HHHHHCCEeehhhchhcEEEC-------CCC------eEEeCCCCcccccccccceeee-c-CCCccceeecCHhHhcc-
Confidence            788999999999999999998       566      8999999998776543211100 0 00000001233444322 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.++|+..+.+++.
T Consensus       184 ~~~~~~~Dv~slG~~l~ell~  204 (267)
T cd05066         184 RKFTSASDVWSYGIVMWEVMS  204 (267)
T ss_pred             CccCchhhhHHHHHHHHHHhc
Confidence            333445677888777777553

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.28  E-value=5.6e-11  Score=120.05  Aligned_cols=149  Identities=13%  Similarity=0.106  Sum_probs=95.3

Q ss_pred             ceeec-ccceeEEEEEEeccCCCCCCCCCeEEEEEEec-CCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          289 EAPVA-SGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH-PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       289 ~~PIg-sGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~-P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      ...|| .|+.|.||+....         |+.++||... +++-..+..+            ..+               .
T Consensus        36 ~~~lg~~~g~gtv~~v~~~---------~~~~vlk~~~r~~~i~kv~~~------------~~~---------------~   79 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP---------GVNWVLRHYRRGGLIGKLSKD------------RYL---------------F   79 (239)
T ss_pred             CceeecCCCCccEEEEEeC---------CceEEEEEeeEcchHHhhhhh------------ccc---------------c
Confidence            45687 8999999999874         4789999764 3321111100            000               0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC------CCCcEEEEeccCC-ccHHHHHHhhhcchhhHHHHHHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL------VHPAVLVETYEQG-ECVSRYVDELQGHERLKSALAHI  439 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l------~t~~VLVmEyi~G-~~L~~~l~~~~~~~~~~~~la~~  439 (581)
                      .....-.+.+|.+.+.++.+     .++.+|+++...      ..+.++||||++| .+|.+++....    ........
T Consensus        80 ~~~~~~r~~rE~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~~----l~~~~~~~  150 (239)
T PRK01723         80 TGLERTRAFAEFRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEAP----LSEEQWQA  150 (239)
T ss_pred             cchhhhHHHHHHHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcCC----CCHHHHHH
Confidence            00112234566677766643     356677776421      1133699999998 78988875421    11222333


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      +. ..+..+|..|++|+|+||+|||++       .++      +++|+|||.+..-.
T Consensus       151 i~-~~l~~lH~~GI~HrDlkp~NILv~-------~~~------~v~LIDfg~~~~~~  193 (239)
T PRK01723        151 IG-QLIARFHDAGVYHADLNAHNILLD-------PDG------KFWLIDFDRGELRT  193 (239)
T ss_pred             HH-HHHHHHHHCCCCCCCCCchhEEEc-------CCC------CEEEEECCCcccCC
Confidence            33 348889999999999999999998       556      89999999887654

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.28  E-value=2.4e-11  Score=121.42  Aligned_cols=126  Identities=12%  Similarity=0.124  Sum_probs=75.9

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcchh--hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGHER--LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP  482 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~~~--~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~  482 (581)
                      ...+++|||+.|.+|.+++........  ....++..++.+ +..+|..|++|+|++|.||+++       .++      
T Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~-l~~lH~~~i~H~dlk~~nili~-------~~~------  135 (262)
T cd05058          70 GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKG-MEYLASKKFVHRDLAARNCMLD-------ESF------  135 (262)
T ss_pred             CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHHHHhCCccccccCcceEEEc-------CCC------
Confidence            346799999999999999864322111  112233344433 6788999999999999999998       666      


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .++|.|||++..+.+......... ........+.++|.+.. .......|.++|+..+.+++.
T Consensus       136 ~~kl~dfg~~~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~  197 (262)
T cd05058         136 TVKVADFGLARDIYDKEYYSVHNH-TGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMT  197 (262)
T ss_pred             cEEECCccccccccCCcceeeccc-ccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHc
Confidence            899999999876543211000000 00000011233443322 233345577777777777765

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.28  E-value=6.9e-11  Score=119.19  Aligned_cols=146  Identities=25%  Similarity=0.350  Sum_probs=95.0

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +-||+|++|.||+|+++..   ....+.+|+||+..+.....                                      
T Consensus         5 ~~ig~G~fg~v~~~~~~~~---~~~~~~~V~vk~~~~~~~~~--------------------------------------   43 (259)
T PF07714_consen    5 KQIGEGSFGKVYRAEWKQK---DNDKNQPVAVKILKPSSSEE--------------------------------------   43 (259)
T ss_dssp             EEEEEESSEEEEEEEEEST---TTSSEEEEEEEEESTTSSHH--------------------------------------
T ss_pred             eEEccCCCcEEEEEEEEcc---cCCCCEEEEEEEeccccccc--------------------------------------
Confidence            5799999999999999820   11236899999986642211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhh---hcchhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL---QGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~---~~~~~~~~~la~~~i~a~l~  446 (581)
                      ..-+|.+|.+.+.++     +++++.-..-+.....+..+||||+++++|.+++...   .........++..++++ +.
T Consensus        44 ~~~~~~~e~~~l~~l-----~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~-l~  117 (259)
T PF07714_consen   44 EEEEFLNEIQILRKL-----RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEA-LS  117 (259)
T ss_dssp             HHHHHHHHHHHHHTH-----SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHH-HH
T ss_pred             cceeeeecccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cc
Confidence            112345565555544     2233221111112234568999999999999998764   11222233445444444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      .||..+++|+|++|.||+++       .++      .++|.|||+....
T Consensus       118 ~Lh~~~iiH~~l~~~nill~-------~~~------~~Kl~~f~~~~~~  153 (259)
T PF07714_consen  118 YLHSNNIIHGNLSPSNILLD-------SNG------QVKLSDFGLSRPI  153 (259)
T ss_dssp             HHHHTTEEEST-SGGGEEEE-------TTT------EEEEESTTTGEET
T ss_pred             cccccccccccccccccccc-------ccc------ccccccccccccc
Confidence            89999999999999999999       667      9999999998876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.27  E-value=5.5e-11  Score=122.96  Aligned_cols=199  Identities=21%  Similarity=0.173  Sum_probs=118.1

Q ss_pred             hCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccccccc
Q 008021          276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWL  355 (581)
Q Consensus       276 lG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l  355 (581)
                      +....++.|..  .+.||.|++|+||+|+.+.+       ++.||||.....-..                         
T Consensus         9 ~~~~~~~~~~~--~~~lg~g~~g~v~~~~~~~~-------~~~~~ik~~~~~~~~-------------------------   54 (308)
T cd06634           9 FKDDPEKLFSD--LREIGHGSFGAVYFARDVRN-------SEVVAIKKMSYSGKQ-------------------------   54 (308)
T ss_pred             hcCCcHHHHHH--HHheeeCCCEEEEEEEEcCC-------CcEEEEEEEeccccc-------------------------
Confidence            44555666653  46799999999999999764       689999976532100                         


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhH
Q 008021          356 RLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLK  433 (581)
Q Consensus       356 ~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~  433 (581)
                       ..+.          .-++.+|.+.+..+.     ++++.-...+.......++||||+.| ++.+++......  ....
T Consensus        55 -~~~~----------~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~  117 (308)
T cd06634          55 -SNEK----------WQDIIKEVRFLQKLR-----HPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEI  117 (308)
T ss_pred             -ChHH----------HHHHHHHHHHHHhCC-----CCCcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHH
Confidence             0000          012334444443331     12211111111123456799999987 566655321111  1111


Q ss_pred             HHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh
Q 008021          434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR  513 (581)
Q Consensus       434 ~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~  513 (581)
                      ..++..++. .+..+|..|++|+|++|.||+++       .++      .+++.|||++..+.+....         ...
T Consensus       118 ~~~~~~l~~-~l~~LH~~~i~H~dl~p~nil~~-------~~~------~~kl~dfg~~~~~~~~~~~---------~~~  174 (308)
T cd06634         118 AAVTHGALQ-GLAYLHSHNMIHRDVKAGNILLS-------EPG------LVKLGDFGSASIMAPANXF---------VGT  174 (308)
T ss_pred             HHHHHHHHH-HHHHHHhCCcccCCCCHHhEEEC-------CCC------cEEECCcccceeecCcccc---------cCC
Confidence            222223333 37788999999999999999998       666      8999999998776543211         112


Q ss_pred             cHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          514 DGRTAAECTLRL--SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       514 D~~~~~e~ll~l--~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ..+.+.|.+...  +......|.++|+..+.+++.+.
T Consensus       175 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~  211 (308)
T cd06634         175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  211 (308)
T ss_pred             ccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCC
Confidence            235566665432  23344678999998888887663

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.27  E-value=2.8e-11  Score=123.02  Aligned_cols=187  Identities=16%  Similarity=0.090  Sum_probs=109.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+++...+       |+.||||........                                      
T Consensus         9 ~~~lg~G~~g~vy~~~~~~~-------~~~~aiK~~~~~~~~--------------------------------------   43 (288)
T cd06616           9 LGEIGRGAFGTVNKMLHKPS-------GTIMAVKRIRSTVDE--------------------------------------   43 (288)
T ss_pred             HHHhCCCCceEEEEEEECCC-------CCEEEEEEehhccCh--------------------------------------
Confidence            46799999999999999765       699999975543110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHh---hh---cchhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDE---LQ---GHERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~---~~---~~~~~~~~la~~~  440 (581)
                      ..+.++.+|...+.++.    ++++  +++.+.  .......++|||+++ ++.++...   ..   ........++..+
T Consensus        44 ~~~~~~~~e~~~l~~~~----~~~~--iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i  116 (288)
T cd06616          44 KEQKRLLMDLDVVMRSS----DCPY--IVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVAT  116 (288)
T ss_pred             HHHHHHHHHHHHHHHhc----CCCC--EeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence            01123344544444332    1122  222221  123456799999875 44443221   11   1111112333333


Q ss_pred             HHHHHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          441 THALLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       441 i~a~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      +.+ ++.+|. .|++|+|++|.||+++       .++      .++|+|||++..+.......      .......+.++
T Consensus       117 ~~~-l~~lh~~~~i~H~dlkp~Nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~------~~~~~~~y~aP  176 (288)
T cd06616         117 VKA-LNYLKEELKIIHRDVKPSNILLD-------RNG------NIKLCDFGISGQLVDSIAKT------RDAGCRPYMAP  176 (288)
T ss_pred             HHH-HHHHhhcCCeeccCCCHHHEEEc-------cCC------cEEEeecchhHHhccCCccc------cccCccCccCH
Confidence            333 677876 5999999999999998       666      89999999987654321110      00111234556


Q ss_pred             HHHHhh--cCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRL--SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l--~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+...  .......|.++|+..+.+++++
T Consensus       177 E~~~~~~~~~~~~~~Di~slG~il~el~~g  206 (288)
T cd06616         177 ERIDPSARDGYDVRSDVWSLGITLYEVATG  206 (288)
T ss_pred             HHhccccccCCcchhhhhHHHHHHHHHHhC
Confidence            655432  1344467889998888888766

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.27  E-value=2.7e-11  Score=123.62  Aligned_cols=189  Identities=14%  Similarity=0.064  Sum_probs=109.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+       |+.||||..+......                           +.        
T Consensus         7 ~~~l~~g~~~~v~~~~~~~~-------~~~~~iK~~~~~~~~~---------------------------~~--------   44 (294)
T PLN00009          7 VEKIGEGTYGVVYKARDRVT-------NETIALKKIRLEQEDE---------------------------GV--------   44 (294)
T ss_pred             EEEecCCCCEEEEEEEecCC-------CcEEEEEehhhccccc---------------------------cc--------
Confidence            47899999999999998764       6999999754321000                           00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a  443 (581)
                        .-.+.+|++.+.++.     +++  +++.+.  ......++||||++| ++.+++......   ...-..++..++.+
T Consensus        45 --~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~a  114 (294)
T PLN00009         45 --PSTAIREISLLKEMQ-----HGN--IVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRG  114 (294)
T ss_pred             --hHHHHHHHHHHHhcc-----CCC--EeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHH
Confidence              011233444444332     222  222222  122456899999976 676665432211   11112344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..||..|++|+|++|.||+++.      .++      .++++|||++..+....... ..    -...-.+.+.|.+.
T Consensus       115 -L~~LH~~~i~H~dl~p~nill~~------~~~------~~kl~dfg~~~~~~~~~~~~-~~----~~~~~~y~~PE~~~  176 (294)
T PLN00009        115 -IAYCHSHRVLHRDLKPQNLLIDR------RTN------ALKLADFGLARAFGIPVRTF-TH----EVVTLWYRAPEILL  176 (294)
T ss_pred             -HHHHHhCCeeCCCCCcceEEEEC------CCC------EEEEcccccccccCCCcccc-cc----CceeecccCHHHHh
Confidence             78899999999999999999981      233      79999999987543221100 00    00011234455543


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .-.......|.++|+..+.+++++
T Consensus       177 ~~~~~~~~~Dv~slG~i~~~l~tg  200 (294)
T PLN00009        177 GSRHYSTPVDIWSVGCIFAEMVNQ  200 (294)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhC
Confidence            322333456888888888888776

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.27  E-value=4.4e-11  Score=122.04  Aligned_cols=194  Identities=17%  Similarity=0.147  Sum_probs=112.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||++......  ....+..||||...-...                             .         
T Consensus        10 ~~~lg~G~~~~v~~~~~~~~~--~~~~~~~~~ik~~~~~~~-----------------------------~---------   49 (288)
T cd05093          10 KRELGEGAFGKVFLAECYNLC--PEQDKILVAVKTLKDASD-----------------------------N---------   49 (288)
T ss_pred             ccccCCcCCeeEEeeEeccCC--CCCcceEEEEEecCCcCH-----------------------------H---------
Confidence            567999999999999864310  011246789997432100                             0         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--------------chhhHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--------------HERLKS  434 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--------------~~~~~~  434 (581)
                       ..-++.+|...+.++.     ++++.-..-+.......++||||++|.+|.+++.....              ......
T Consensus        50 -~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~  123 (288)
T cd05093          50 -ARKDFHREAELLTNLQ-----HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQML  123 (288)
T ss_pred             -HHHHHHHHHHHHHhCC-----CCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHH
Confidence             0012334444443321     22221111112223456899999999999999864221              111112


Q ss_pred             HHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          435 ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      .++..++.+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+...........   ....-
T Consensus       124 ~~~~ql~~a-L~~lH~~~i~H~dlkp~Nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~---~~~~~  186 (288)
T cd05093         124 HIAQQIAAG-MVYLASQHFVHRDLATRNCLVG-------ENL------LVKIGDFGMSRDVYSTDYYRVGGH---TMLPI  186 (288)
T ss_pred             HHHHHHHHH-HHHHHhCCeeecccCcceEEEc-------cCC------cEEeccCCccccccCCceeecCCC---CCccc
Confidence            233344443 7789999999999999999998       666      899999999876543221000000   00001


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .+.++|.+.. .......|.|+|+..+.++++
T Consensus       187 ~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t  217 (288)
T cd05093         187 RWMPPESIMY-RKFTTESDVWSLGVVLWEIFT  217 (288)
T ss_pred             cccCHHHhcc-CCCCchhhHHHHHHHHHHHHh
Confidence            2445554432 334446788888888888876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.27  E-value=1.5e-11  Score=128.85  Aligned_cols=187  Identities=16%  Similarity=0.092  Sum_probs=112.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||.|++|.||+|+...+       |+.||||.........                           ..        
T Consensus        15 ~~~ig~g~~g~v~~~~~~~~-------~~~vaiK~~~~~~~~~---------------------------~~--------   52 (328)
T cd07856          15 LQPVGMGAFGLVCSARDQLT-------GQNVAIKKIMKPFSTP---------------------------VL--------   52 (328)
T ss_pred             EEeecccCCeEEEEEEECCC-------CCEEEEEEeccccccc---------------------------ch--------
Confidence            58999999999999998764       7999999765321100                           00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCC-cccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~-V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~  447 (581)
                        .-++..|...+.++.     +++ +.+...+..-....+++|||+. .+|.+++............++..++.+ +..
T Consensus        53 --~~~~~~E~~~l~~l~-----hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~a-L~~  123 (328)
T cd07856          53 --AKRTYRELKLLKHLR-----HENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRG-LKY  123 (328)
T ss_pred             --hHHHHHHHHHHHhcC-----CCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHH-HHH
Confidence              011223333333331     122 1222222111234579999985 578887653222222223344444444 788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      +|..|++|+|++|.||+++       .++      .++|+|||++...+......        .....+.+.|.+.....
T Consensus       124 LH~~~iiH~dl~p~Nili~-------~~~------~~~l~dfg~~~~~~~~~~~~--------~~~~~y~aPE~~~~~~~  182 (328)
T cd07856         124 VHSAGVVHRDLKPSNILIN-------ENC------DLKICDFGLARIQDPQMTGY--------VSTRYYRAPEIMLTWQK  182 (328)
T ss_pred             HHhCCcccCCCCHHHEeEC-------CCC------CEEeCccccccccCCCcCCC--------cccccccCceeeeccCC
Confidence            9999999999999999998       666      89999999987654322111        11112344554432223


Q ss_pred             CCCCCCHHHHHHHHHHhhhH
Q 008021          528 QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....|.++|+..+.+++++
T Consensus       183 ~~~~~Dv~slG~il~el~tg  202 (328)
T cd07856         183 YDVEVDIWSAGCIFAEMLEG  202 (328)
T ss_pred             cCcHHHHHHHHHHHHHHHhC
Confidence            34456888888888888876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.27  E-value=3e-11  Score=124.59  Aligned_cols=195  Identities=22%  Similarity=0.179  Sum_probs=113.3

Q ss_pred             ChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       279 ~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      .+++.|..  .+.||+|++|.||+|+...+       |+.||||+....-...                          .
T Consensus        12 ~~~~~y~~--~~~lg~g~~g~vy~~~~~~~-------~~~v~iK~~~~~~~~~--------------------------~   56 (307)
T cd06607          12 DPEKLFTD--LREIGHGSFGAVYFARDVRT-------NEVVAIKKMSYSGKQS--------------------------N   56 (307)
T ss_pred             Ccchhhhh--heeecCCCCeEEEEEEEcCC-------CcEEEEEEEeccccCc--------------------------H
Confidence            34444442  36799999999999998764       6999999864321100                          0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHH
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSAL  436 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~l  436 (581)
                      +.          .-++.+|...+.++.     ++++.-..-+.......++||||++|. +.+++.....  .......+
T Consensus        57 ~~----------~~~~~~Ei~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~  120 (307)
T cd06607          57 EK----------WQDIIKEVRFLQQLR-----HPNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAI  120 (307)
T ss_pred             HH----------HHHHHHHHHHHHhCC-----CCCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHH
Confidence            00          012333443333221     222211111111234457999999874 4454432111  11112234


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +..++.+ +..+|..|++|+|++|+||+++       .+|      .++|.|||++...++....         ...-.+
T Consensus       121 ~~ql~~~-L~~LH~~~i~H~dl~p~nIl~~-------~~~------~~kL~dfg~~~~~~~~~~~---------~~~~~y  177 (307)
T cd06607         121 CHGALQG-LAYLHSHERIHRDIKAGNILLT-------EPG------TVKLADFGSASLVSPANSF---------VGTPYW  177 (307)
T ss_pred             HHHHHHH-HHHHHHCCceecCCCcccEEEC-------CCC------CEEEeecCcceecCCCCCc---------cCCccc
Confidence            4444443 7889999999999999999998       667      8999999998765443210         111133


Q ss_pred             HHHHHHHhh--cCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLRL--SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~l--~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.|.+...  .......|.++|+..+.+++++
T Consensus       178 ~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg  210 (307)
T cd06607         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAER  210 (307)
T ss_pred             cCceeeeccCCCCCCcccchHHHHHHHHHHHcC
Confidence            445544322  2233467888888888888766

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.26  E-value=3.7e-11  Score=116.70  Aligned_cols=122  Identities=21%  Similarity=0.208  Sum_probs=77.2

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      ...+++|||++|.+|.+++..... .......+...++.+ +..+|..|++|+|++|.||+++       .++      .
T Consensus        60 ~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~-l~~lh~~~i~h~~i~~~ni~~~-------~~~------~  125 (244)
T smart00220       60 DKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSA-LEYLHSNGIIHRDLKPENILLD-------EDG------H  125 (244)
T ss_pred             CEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHH-HHHHHHcCeecCCcCHHHeEEC-------CCC------c
Confidence            456899999999999998865321 111122333333333 6788999999999999999998       556      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++++|||.+..+.......      .......+...|.+. ........|.++|+..+.+++.+
T Consensus       126 ~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~pE~~~-~~~~~~~~Di~slG~~l~~l~~~  182 (244)
T smart00220      126 VKLADFGLARQLDPGGLLT------TFVGTPEYMAPEVLL-GKGYGKAVDVWSLGVILYELLTG  182 (244)
T ss_pred             EEEccccceeeeccccccc------cccCCcCCCCHHHHc-cCCCCchhhHHHHHHHHHHHHhC
Confidence            9999999998876542000      000111122333332 22233356777777777777665

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.26  E-value=6.1e-11  Score=124.04  Aligned_cols=151  Identities=19%  Similarity=0.232  Sum_probs=91.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|+||+|+..........++..||||+.+......                            ..       
T Consensus        17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------~~-------   61 (334)
T cd05100          17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDK----------------------------DL-------   61 (334)
T ss_pred             cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHH----------------------------HH-------
Confidence            5799999999999998643100000123579999865432110                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc-----------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH-----------------  429 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------------  429 (581)
                         -++.+|.+.+.++.    .++++.  +.+.  ......+++|||++|.+|.+++......                 
T Consensus        62 ---~~~~~E~~~l~~l~----~h~~iv--~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~  132 (334)
T cd05100          62 ---SDLVSEMEMMKMIG----KHKNII--NLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLT  132 (334)
T ss_pred             ---HHHHHHHHHHHhhc----CCCCee--eeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCC
Confidence               11233444443331    222222  1221  1223457999999999999998642110                 


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      ......++..++.+ +..+|..|++|+|++|.||+++       .++      .++|+|||++..+..
T Consensus       133 ~~~~~~~~~qi~~a-l~~LH~~givH~dlkp~Nill~-------~~~------~~kL~Dfg~~~~~~~  186 (334)
T cd05100         133 FKDLVSCAYQVARG-MEYLASQKCIHRDLAARNVLVT-------EDN------VMKIADFGLARDVHN  186 (334)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHCCeeccccccceEEEc-------CCC------cEEECCcccceeccc
Confidence            01112234444444 7789999999999999999998       666      899999999876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.26  E-value=8.4e-12  Score=130.28  Aligned_cols=218  Identities=14%  Similarity=0.062  Sum_probs=139.2

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      .-+|+|.||+|-.+.++.+       ++.|||||.+-               +                   +..++..+
T Consensus        95 ~~lGeGtFGkV~ec~D~~~-------~~~vAlKIik~---------------V-------------------~kYreAa~  133 (415)
T KOG0671|consen   95 DLLGEGTFGKVVECWDRET-------KEHVALKIIKN---------------V-------------------DKYREAAL  133 (415)
T ss_pred             hhhcCCcccceEEEeecCC-------CceehHHHHHH---------------H-------------------HHHhhHHH
Confidence            5689999999999999875       69999997431               1                   11111111


Q ss_pred             HHHHHHHHHHHHHHHHHhc-ccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNF-RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHALL  445 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f-~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~l  445 (581)
                      -      |.+-++++.+.- .+...+..-.-+.++-+.-++|.|-+ |.++.+++.+..-   +...-+.++.++.++ +
T Consensus       134 i------Ei~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~s-v  205 (415)
T KOG0671|consen  134 I------EIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLES-V  205 (415)
T ss_pred             H------HHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHH-H
Confidence            1      222333332221 11112222223345666778899976 8889999865221   112234566666665 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeeccc----ccccc-c--ccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQK----KSSQK-R--LFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~----~~~~~-g--~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      +.||..+++|.||||.|||+.-.+-    ..... .  .....+.|+++|||.++.-.+..        ..++....|+|
T Consensus       206 ~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsTRHYRA  277 (415)
T KOG0671|consen  206 AFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------STIVSTRHYRA  277 (415)
T ss_pred             HHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--------ceeeeccccCC
Confidence            7799999999999999999863221    00000 0  00124589999999988655443        46678889999


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHHH
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNYL  565 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~l  565 (581)
                      +|.+|++|-.++| |.|+++|.|-|+..|.  |+-..-.+-|.=|.++|
T Consensus       278 PEViLgLGwS~pC-DvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl  325 (415)
T KOG0671|consen  278 PEVILGLGWSQPC-DVWSIGCILVELYTGETLFQTHENLEHLAMMERIL  325 (415)
T ss_pred             chheeccCcCCcc-CceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence            9999999999877 9999999999999884  44443333334344444

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.26  E-value=1.7e-12  Score=151.19  Aligned_cols=193  Identities=13%  Similarity=0.088  Sum_probs=122.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEec--CCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH--PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~--P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      ..-||.|-||+||-|...++       |+-.|||-..  |+...                 .+|.        +      
T Consensus      1240 g~~Ig~G~fG~VYtavN~~t-------GellAvKEI~iq~~~~k-----------------~~~~--------i------ 1281 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDT-------GELLAVKEIKIQDSDHK-----------------TFKL--------I------ 1281 (1509)
T ss_pred             ccccCCcceeeeEEeecCCc-------cchhhhhhhhcCccccc-----------------cCcc--------h------
Confidence            35699999999999999886       7999998432  21110                 0111        0      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhh-HHHHHHHHHHHHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL-KSALAHIGTHALL  445 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~-~~~la~~~i~a~l  445 (581)
                              .+|.+.++.+.     ++++.-+..+.-.-.+-.|-||||+|++|.+.++........ .+.....++ ..+
T Consensus      1282 --------~eEm~vlE~ln-----HpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll-~gl 1347 (1509)
T KOG4645|consen 1282 --------AEEMKVLEGLN-----HPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLL-EGL 1347 (1509)
T ss_pred             --------HHHHHHHHhcc-----CccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHH-HHH
Confidence                    11333333221     222222111111112234789999999999987642211111 111122222 236


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||++|||||||||.||+++       ..|      -|++.|||.+..+... -+++-.-+..++-.--|-|+|.+...
T Consensus      1348 a~LH~~gIVHRDIK~aNI~Ld-------~~g------~iK~~DFGsa~ki~~~-~~~~~~el~~~~GT~~YMAPEvit~t 1413 (1509)
T KOG4645|consen 1348 AYLHEHGIVHRDIKPANILLD-------FNG------LIKYGDFGSAVKIKNN-AQTMPGELQSMMGTPMYMAPEVITGT 1413 (1509)
T ss_pred             HHHHhcCceecCCCccceeee-------cCC------cEEeecccceeEecCc-hhcCCHHHHhhcCCchhcCchhhccc
Confidence            679999999999999999999       677      8999999999988765 22223344455666677888888775


Q ss_pred             cCCC--CCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQ--NCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~--~~~D~~~f~~~l~~l~~~  547 (581)
                      ...+  ...|.|+++|.+-|+++|
T Consensus      1414 ~~kG~~~A~DiWslGCVVlEM~tG 1437 (1509)
T KOG4645|consen 1414 KGKGHGGAADIWSLGCVVLEMATG 1437 (1509)
T ss_pred             ccCCCCcchhhhcccceEEEeecC
Confidence            4322  478999999999999888

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.26  E-value=7.3e-12  Score=131.45  Aligned_cols=206  Identities=16%  Similarity=0.136  Sum_probs=134.1

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHH---HHHHHHhcccccccccChhHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII---NLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il---~~la~~~~~~p~l~~l~l~e~  360 (581)
                      .+|+ -..||.||||.|-.|..+.+       .+-+||||++.++--+ ..|+..-   +.+..+...=|          
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgt-------dELyAiKiLkKDViiQ-dDDvectm~EKrvLAL~~kpp----------  410 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGT-------DELYAIKILKKDVIIQ-DDDVECTMVEKRVLALPGKPP----------  410 (683)
T ss_pred             cccceEEEeccCccceeeeecccCc-------chhhhhhhhccceeee-cCcccceehhhhheecCCCCc----------
Confidence            3455 57899999999999998865       6899999998875311 1121110   00100000111          


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHH--HHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA--LAH  438 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~--la~  438 (581)
                                         -+..+..-|+...++             +.||||+.|+.|.-.++....-......  -|+
T Consensus       411 -------------------FL~qlHScFQTmDRL-------------yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaE  458 (683)
T KOG0696|consen  411 -------------------FLVQLHSCFQTMDRL-------------YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAE  458 (683)
T ss_pred             -------------------hHHHHHHHhhhhhhe-------------eeEEEEecCchhhhHHHHhcccCCchhhhhhHH
Confidence                               112222223322222             4899999999988766543221111111  122


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc--cCHhhHHHHHHHHHHHHhhcHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE--LSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~--L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +.  .-|-.||..||+.||||-.|||++       .+|      +|+|.||||+++  .+....+.||        +..+
T Consensus       459 ia--igLFFLh~kgIiYRDLKLDNvmLd-------~eG------HiKi~DFGmcKEni~~~~TTkTFC--------GTPd  515 (683)
T KOG0696|consen  459 IA--IGLFFLHSKGIIYRDLKLDNVMLD-------SEG------HIKIADFGMCKENIFDGVTTKTFC--------GTPD  515 (683)
T ss_pred             HH--HHhhhhhcCCeeeeeccccceEec-------cCC------ceEeeecccccccccCCcceeeec--------CCCc
Confidence            22  235568999999999999999999       788      999999999985  3444555655        4455


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSN  563 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~  563 (581)
                      -+|-.++....+....|-|+|.--+.|++.+.  +...+..+|+..+..
T Consensus       516 YiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e  564 (683)
T KOG0696|consen  516 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME  564 (683)
T ss_pred             ccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            55555666677778899999999999988774  778888888876654

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.25  E-value=3.5e-11  Score=120.94  Aligned_cols=199  Identities=15%  Similarity=0.119  Sum_probs=113.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|.+..+  +    ++.||||............                   .......+       
T Consensus         5 ~~~ig~G~~~~v~~~~~~~~--~----~~~~avk~~~~~~~~~~~~-------------------~~~~~~~~-------   52 (269)
T cd08528           5 LEHLGSGAFGCVYKVRKKNN--G----QNLLALKEINVHNPAFGKD-------------------KRERDKSI-------   52 (269)
T ss_pred             hhhhcCCCCceEEEEEEcCC--C----CceeeeeEeeccccccccc-------------------cccchHHH-------
Confidence            46799999999999999752  2    6899999865432110000                   00000111       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i~a  443 (581)
                         -++..|..-+.+   . .+++++.-+.-+.......+++|||++|.+|.+++.....     .......++..++..
T Consensus        53 ---~~~~~e~~~l~~---~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  125 (269)
T cd08528          53 ---GDIVSEVTIIKE---Q-LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLA  125 (269)
T ss_pred             ---HHHHHHHHHHhh---c-CCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence               112223222211   1 1123322211112223456899999999999988754211     111112233333333


Q ss_pred             HHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          444 LLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       444 ~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                       +..+|. .|++|+|++|.||+++       .++      .++|+|||++...+.....      ........+.++|.+
T Consensus       126 -l~~lh~~~~i~H~dl~~~nil~~-------~~~------~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~Pe~~  185 (269)
T cd08528         126 -LRYLHKEKRIVHRDLTPNNIMLG-------EDD------KVTITDFGLAKQKQPESKL------TSVVGTILYSCPEIV  185 (269)
T ss_pred             -HHHhccCCceeecCCCHHHEEEC-------CCC------cEEEecccceeeccccccc------ccccCcccCcChhhh
Confidence             677884 7899999999999998       666      8999999999876654311      111122234445544


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. +......|.+.|+..+.+++.+
T Consensus       186 ~~-~~~~~~~Dv~slG~ll~~l~~g  209 (269)
T cd08528         186 KN-EPYGEKADVWAFGCILYQMCTL  209 (269)
T ss_pred             cC-CCCchHHHHHHHHHHHHHHHhC
Confidence            32 3344556888888888887765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.25  E-value=3.3e-11  Score=123.48  Aligned_cols=190  Identities=18%  Similarity=0.198  Sum_probs=107.6

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ++++ .+.||+|++|.||+|+...+       |+.||||+.+......-                            .  
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~-------~~~~avK~~~~~~~~~~----------------------------~--   57 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKT-------GHVMAVKQMRRTGNKEE----------------------------N--   57 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCC-------CeEEEEEEEeccCChHH----------------------------H--
Confidence            3444 68999999999999999764       69999999764311100                            0  


Q ss_pred             HHHHHHHHHHHHHH---HHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHH
Q 008021          364 FAVFMMSQVDLARE---AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAH  438 (581)
Q Consensus       364 f~~~l~~ElDf~~E---a~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~  438 (581)
                        ..+..|+.....   ..|+.++...+.             .....+++|||++| .+.++......  .......++.
T Consensus        58 --~~~~~e~~~~~~~~~~~~i~~~~~~~~-------------~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~  121 (296)
T cd06618          58 --KRILMDLDVVLKSHDCPYIVKCYGYFI-------------TDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTV  121 (296)
T ss_pred             --HHHHHHHHHHHhccCCCchHhhheeee-------------cCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHH
Confidence              000111111000   012222211111             12345799999876 56665543221  1111223444


Q ss_pred             HHHHHHHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          439 IGTHALLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       439 ~~i~a~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      .++.+ +..+|. .|++|+|++|.||+++       .++      .++|+|||++..+.......-      ......+.
T Consensus       122 ~i~~~-l~~lH~~~~i~H~dl~p~nill~-------~~~------~~kL~dfg~~~~~~~~~~~~~------~~~~~~y~  181 (296)
T cd06618         122 AIVKA-LHYLKEKHGVIHRDVKPSNILLD-------ASG------NVKLCDFGISGRLVDSKAKTR------SAGCAAYM  181 (296)
T ss_pred             HHHHH-HHHHHhhCCEecCCCcHHHEEEc-------CCC------CEEECccccchhccCCCcccC------CCCCcccc
Confidence            44444 677886 6999999999999998       666      899999999876643221110      00112234


Q ss_pred             HHHHHHhh---cCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRL---SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l---~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.|.+...   +......|.++|+..+.+++.+
T Consensus       182 aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g  214 (296)
T cd06618         182 APERIDPPDPNPKYDIRADVWSLGISLVELATG  214 (296)
T ss_pred             CHhhcCCCCCccccccchhHHHHHHHHHHHHhC
Confidence            44544221   1233456888888888887765

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.25  E-value=3.7e-11  Score=119.32  Aligned_cols=189  Identities=12%  Similarity=0.062  Sum_probs=111.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|.||+|..+.+       |..||+|.....-.                          +..          
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~-------~~~~~ik~~~~~~~--------------------------~~~----------   41 (257)
T cd08225           5 IKKIGEGSFGKIYLAKAKSD-------SEHCVIKEIDLTKM--------------------------PVK----------   41 (257)
T ss_pred             EEEecCCCcceEEEEEEcCC-------CceEEEEEeeHhhc--------------------------cch----------
Confidence            57899999999999999864       68999997543200                          000          


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                       .+-.+.+|...+.++.     +++  +++.+.  ......++++||++|.+|.+++.....   .......++..++++
T Consensus        42 -~~~~~~~E~~~l~~~~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~  113 (257)
T cd08225          42 -EKEASKKEVILLAKMK-----HPN--IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG  113 (257)
T ss_pred             -hhHHHHHHHHHHHhCC-----CCC--hhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence             0011223433333321     111  112221  122345799999999999998854322   111222334444443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..|++|+|++|.||+++       .++     ..++++|||.+..+.+......     .......+.+.|.+.
T Consensus       114 -l~~lh~~~i~H~dl~~~nil~~-------~~~-----~~~~l~d~~~~~~~~~~~~~~~-----~~~~~~~~~ape~~~  175 (257)
T cd08225         114 -LKHIHDRKILHRDIKSQNIFLS-------KNG-----MVAKLGDFGIARQLNDSMELAY-----TCVGTPYYLSPEICQ  175 (257)
T ss_pred             -HHHHHHCCcccccCCHHHEEEc-------CCC-----CeEEecccccchhccCCccccc-----ccCCCccccCHHHHc
Confidence             6788999999999999999998       443     1579999999887654322110     001111233444432


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . +......|.+.|+..+.+++.+
T Consensus       176 ~-~~~~~~~Dv~slG~il~~l~~g  198 (257)
T cd08225         176 N-RPYNNKTDIWSLGCVLYELCTL  198 (257)
T ss_pred             C-CCCCchhhHHHHHHHHHHHHhC
Confidence            2 2333457888888888887765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.25  E-value=1.4e-11  Score=133.86  Aligned_cols=187  Identities=20%  Similarity=0.234  Sum_probs=121.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|-||.||.+....        +..||||..||+..+.-                                    
T Consensus       543 ~ekiGeGqFGEVhLCeveg--------~lkVAVK~Lr~~a~~~~------------------------------------  578 (807)
T KOG1094|consen  543 KEKIGEGQFGEVHLCEVEG--------PLKVAVKILRPDATKNA------------------------------------  578 (807)
T ss_pred             hhhhcCcccceeEEEEecC--------ceEEEEeecCcccchhH------------------------------------
Confidence            4789999999999999853        69999999999854321                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC---CCcEEEEeccCCccHHHHHHhhhcchhhH---HHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV---HPAVLVETYEQGECVSRYVDELQGHERLK---SALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~---t~~VLVmEyi~G~~L~~~l~~~~~~~~~~---~~la~~~i~  442 (581)
                        .-||..|++-+.+++     +++|.  +.+ .-|   .+-.++|||++-+.|++++.+.+......   -.++..+. 
T Consensus       579 --r~~F~kEIkiLsqLk-----hPNIv--eLv-GVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqia-  647 (807)
T KOG1094|consen  579 --RNDFLKEIKILSRLK-----HPNIV--ELL-GVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIA-  647 (807)
T ss_pred             --HHHHHHHHHHHhccC-----CCCee--EEE-eeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHH-
Confidence              135777888777653     22221  111 111   23368999999999999987643322111   12333332 


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      +-+..|-.-+|||||+-|-|+||+       .++      .++++||||++.+-..+....-.  +|++-= ..-+-|.+
T Consensus       648 sgmaYLes~nfVHrd~a~rNcLv~-------~e~------~iKiadfgmsR~lysg~yy~vqg--r~vlpi-RwmawEsi  711 (807)
T KOG1094|consen  648 SGMAYLESLNFVHRDLATRNCLVD-------GEF------TIKIADFGMSRNLYSGDYYRVQG--RAVLPI-RWMAWESI  711 (807)
T ss_pred             HHHHHHHhhchhhccccccceeec-------Ccc------cEEecCcccccccccCCceeeec--ceeeee-eehhHHHH
Confidence            236666778999999999999999       666      99999999998664322111000  000000 01122333


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       -++......|.|+|.-.|.|++.-
T Consensus       712 -llgkFttaSDvWafgvTlwE~~~~  735 (807)
T KOG1094|consen  712 -LLGKFTTASDVWAFGVTLWEVFML  735 (807)
T ss_pred             -HhccccchhhhhhhHHHHHHHHHH
Confidence             357777788999999999998754

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.24  E-value=4e-11  Score=121.88  Aligned_cols=194  Identities=19%  Similarity=0.131  Sum_probs=113.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|......  ....+..||+|.......                                       
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~--~~~~~~~~~~k~~~~~~~---------------------------------------   48 (280)
T cd05092          10 KWELGEGAFGKVFLAECHNLL--PEQDKMLVAVKALKEASE---------------------------------------   48 (280)
T ss_pred             ccccCCccCCeEEEeEEecCC--CCCCceEEEEEecCcCCH---------------------------------------
Confidence            578999999999999754210  011257899997432210                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc----------------hhh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH----------------ERL  432 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~----------------~~~  432 (581)
                      ...-++.+|.+.+.++.     ++++.-..-+.......+++|||++|.+|.+++......                ...
T Consensus        49 ~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~  123 (280)
T cd05092          49 SARQDFQREAELLTVLQ-----HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQ  123 (280)
T ss_pred             HHHHHHHHHHHHHhcCC-----CCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHH
Confidence            00123455555444331     222211111122234568999999999999988643210                011


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh
Q 008021          433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR  512 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~  512 (581)
                      ...++..++.+ +..+|..|++|+|++|.||+++       +++      .++|.|||++..+............   ..
T Consensus       124 ~~~~~~qi~~a-l~~LH~~~i~H~dlkp~nil~~-------~~~------~~kL~dfg~~~~~~~~~~~~~~~~~---~~  186 (280)
T cd05092         124 MLAIASQIASG-MVYLASLHFVHRDLATRNCLVG-------QGL------VVKIGDFGMSRDIYSTDYYRVGGRT---ML  186 (280)
T ss_pred             HHHHHHHHHHH-HHHHHHCCeecccccHhhEEEc-------CCC------CEEECCCCceeEcCCCceeecCCCc---cc
Confidence            12233333333 6788999999999999999998       666      8999999998765432211100000   00


Q ss_pred             hcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          513 RDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       513 ~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ...+.++|.+.. .......|.++|+..+.+++.
T Consensus       187 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~  219 (280)
T cd05092         187 PIRWMPPESILY-RKFTTESDIWSFGVVLWEIFT  219 (280)
T ss_pred             cccccCHHHhcc-CCcCchhhHHHHHHHHHHHHc
Confidence            112445555433 233445688999888888876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.24  E-value=2.2e-11  Score=130.95  Aligned_cols=186  Identities=20%  Similarity=0.155  Sum_probs=119.1

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCc--hhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV--GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v--~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -.|.|-|+.|.+|.....       |+.|||||++-+-  ...=..++.||+.+..   .-|                  
T Consensus       439 ~~GkGvFs~Vvra~D~~r-------~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~---AD~------------------  490 (752)
T KOG0670|consen  439 YTGKGVFSTVVRARDQAR-------GQEVAIKIIRNNEVMHKTGLKELEILKKLND---ADP------------------  490 (752)
T ss_pred             ccccceeeeeeeccccCC-------CCeeEEEEeecchHHhhhhhHHHHHHHHhhc---cCc------------------
Confidence            478999999999998764       6899999998661  1112233333333221   111                  


Q ss_pred             HHHHHHHHHH-HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchh----hHHHHHHHHHHH
Q 008021          369 MSQVDLAREA-AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER----LKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea-~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~----~~~~la~~~i~a  443 (581)
                              |- .+..++...|....++             +||.|-+ ...|.++++.......    .-...+.++.- 
T Consensus       491 --------Edk~Hclrl~r~F~hknHL-------------ClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLfl-  547 (752)
T KOG0670|consen  491 --------EDKFHCLRLFRHFKHKNHL-------------CLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFL-  547 (752)
T ss_pred             --------hhhhHHHHHHHHhhhccee-------------EEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHH-
Confidence                    11 1444554455433332             4676655 4566676654221111    11122333322 


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                      .|+.|-..||+|+||||.||||.       ..     +..++|||||.+...++.+-.-|+       -...|+++|++|
T Consensus       548 ALklLK~c~vlHaDIKPDNiLVN-------E~-----k~iLKLCDfGSA~~~~eneitPYL-------VSRFYRaPEIiL  608 (752)
T KOG0670|consen  548 ALKLLKKCGVLHADIKPDNILVN-------ES-----KNILKLCDFGSASFASENEITPYL-------VSRFYRAPEIIL  608 (752)
T ss_pred             HHHHHHhcCeeecccCccceEec-------cC-----cceeeeccCccccccccccccHHH-------HHHhccCcceee
Confidence            25556679999999999999998       21     227999999999988877655443       345679999998


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.. ..++|.|..+|.|.+|.++
T Consensus       609 G~~y-d~~iD~WSvgctLYElYtG  631 (752)
T KOG0670|consen  609 GLPY-DYPIDTWSVGCTLYELYTG  631 (752)
T ss_pred             cCcc-cCCccceeeceeeEEeecc
Confidence            8654 4589999999999999988

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.24  E-value=1.1e-10  Score=117.57  Aligned_cols=189  Identities=17%  Similarity=0.122  Sum_probs=112.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.... .+   ....||||..+.......                                    
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~-~~---~~~~v~ik~~~~~~~~~~------------------------------------   50 (270)
T cd05056          11 GRCIGEGQFGDVYQGVYMSP-EN---EKIAVAVKTCKNCTSPSV------------------------------------   50 (270)
T ss_pred             eeeeCCccceeEEEEEEecC-CC---CCcceEEEecCCcCCHHH------------------------------------
Confidence            57899999999999998642 01   135799997654421100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc-cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY-PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~-~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|+..+.++.     +++  +.+.+. ......++||||++|.+|.+++.....  .......++..++.+ +
T Consensus        51 --~~~~~~e~~~l~~~~-----h~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~-l  120 (270)
T cd05056          51 --REKFLQEAYIMRQFD-----HPH--IVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTA-L  120 (270)
T ss_pred             --HHHHHHHHHHHHhCC-----CCc--hhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHH-H
Confidence              012334444444331     121  111111 112445799999999999999864221  111122344444444 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh-cHHHHHHHHHh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR-DGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~-D~~~~~e~ll~  524 (581)
                      ..+|..|++|+|++|.||+++       .++      .++|+|||++..+.......-     ..... ..+.++|.+ .
T Consensus       121 ~~lH~~~~~H~dl~p~nili~-------~~~------~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~-~  181 (270)
T cd05056         121 AYLESKRFVHRDIAARNVLVS-------SPD------CVKLGDFGLSRYLEDESYYKA-----SKGKLPIKWMAPESI-N  181 (270)
T ss_pred             HHHHhCCeeccccChheEEEe-------cCC------CeEEccCceeeecccccceec-----CCCCccccccChhhh-c
Confidence            789999999999999999998       566      899999999876654321000     00000 124455543 2


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ........|.+.|+..+.+++.
T Consensus       182 ~~~~~~~~Di~slG~il~el~~  203 (270)
T cd05056         182 FRRFTSASDVWMFGVCMWEILM  203 (270)
T ss_pred             cCCCCchhhhHHHHHHHHHHHH
Confidence            2334456788888888888664

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.24  E-value=2.2e-11  Score=135.59  Aligned_cols=123  Identities=10%  Similarity=0.003  Sum_probs=78.1

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcc------hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeeccccccccccc
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGH------ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF  478 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~------~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~  478 (581)
                      ...++|||++.+ .+.+++......      ......++..++.+ ++.||..|++|+|+||+|||++       .+|  
T Consensus       236 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~a-L~yLH~~gIiHrDLKP~NILl~-------~~~--  304 (501)
T PHA03210        236 ANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCA-VEYIHDKKLIHRDIKLENIFLN-------CDG--  304 (501)
T ss_pred             CeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEC-------CCC--
Confidence            445789999866 455544321100      01112344444443 7889999999999999999998       667  


Q ss_pred             CCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          479 RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       479 ~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                          .++|+|||++..+.......-    ........+.+.|.+.. .......|.|+|+..+.+++.+
T Consensus       305 ----~vkL~DFGla~~~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~  364 (501)
T PHA03210        305 ----KIVLGDFGTAMPFEKEREAFD----YGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSH  364 (501)
T ss_pred             ----CEEEEeCCCceecCccccccc----ccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHC
Confidence                899999999987754321110    00112233456666544 3344567999999999998865

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=99.23  E-value=3.4e-10  Score=114.87  Aligned_cols=180  Identities=21%  Similarity=0.206  Sum_probs=121.7

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      ++||.|--+.||.|...+        |.+||||.-+-| +.+++.--..-..++   .. -...|+.+....        
T Consensus        97 ~~IGvGKEsdVY~~~~~~--------g~~~~vKfHR~G-rtsFrkvk~~R~y~~---~~-~h~sWl~~sRl~--------  155 (304)
T COG0478          97 TKIGVGKESDVYVAIDPK--------GRKVAVKFHRLG-RTSFRKVKRNRDYLA---DK-EHGSWLYVSRLA--------  155 (304)
T ss_pred             cccccCccceEEEEECCC--------CCEEEEEEeecC-chhhhhhcchhhhhc---cc-cCcchhhhHHHH--------
Confidence            899999999999999865        699999998887 222221111111111   11 112354433222        


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL  449 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~  449 (581)
                          -.+|-..++++.     ..++.+|+|+  -.+++++||||++|.+|.+.--    ......++...+++. +.-+.
T Consensus       156 ----A~rEf~~L~~L~-----~~G~~VP~P~--~~nRHaVvMe~ieG~eL~~~r~----~~en~~~il~~il~~-~~~~~  219 (304)
T COG0478         156 ----AEREFEALQRLY-----PEGVKVPKPI--AWNRHAVVMEYIEGVELYRLRL----DVENPDEILDKILEE-VRKAY  219 (304)
T ss_pred             ----HHHHHHHHHHhh-----hcCCCCCCcc--ccccceeeeehcccceeecccC----cccCHHHHHHHHHHH-HHHHH
Confidence                234555565554     2357899998  4678899999999999987521    112234556655555 44455


Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      +.|++|+|+.+-||+|+       ++|      .+++|||-.+...+.+.-..++       .+|...+.+.+-+-.
T Consensus       220 ~~GiVHGDlSefNIlV~-------~dg------~~~vIDwPQ~v~~~hp~a~e~l-------~RDv~nii~yFrrky  276 (304)
T COG0478         220 RRGIVHGDLSEFNILVT-------EDG------DIVVIDWPQAVPISHPDAEELL-------ERDVENIIKYFRRKY  276 (304)
T ss_pred             HcCccccCCchheEEEe-------cCC------CEEEEeCcccccCCCCCHHHHH-------HhHHHHHHHHHHHhc
Confidence            89999999999999999       787      8999999999988877766543       677777776665543

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.23  E-value=5.8e-11  Score=122.35  Aligned_cols=147  Identities=21%  Similarity=0.265  Sum_probs=91.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+  |. .-...||+|+..+......                                    
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~--~~-~~~~~vaiK~~~~~~~~~~------------------------------------   52 (303)
T cd05110          12 VKVLGSGAFGTVYKGIWVPE--GE-TVKIPVAIKILNETTGPKA------------------------------------   52 (303)
T ss_pred             ccccccCCCccEEEEEEecC--CC-cceeeEEEEeccccCCHHH------------------------------------
Confidence            46899999999999998764  20 0013689998665421110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                        ...+.+|...+.++.     ++++  .+.+.. ......++|||++++++.+++.....  .......++..++.+ +
T Consensus        53 --~~~~~~e~~~~~~l~-----h~ni--v~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~-L  122 (303)
T cd05110          53 --NVEFMDEALIMASMD-----HPHL--VRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKG-M  122 (303)
T ss_pred             --HHHHHHHHHHHHhCC-----CCCc--ccEEEEEcCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHH-H
Confidence              012334444333321     2221  111111 12335689999999999998754221  111223344444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      ..+|..|++|+|+||.||+++       .++      .++|+|||++..+..
T Consensus       123 ~~LH~~~ivH~dikp~Nill~-------~~~------~~kL~Dfg~~~~~~~  161 (303)
T cd05110         123 MYLEERRLVHRDLAARNVLVK-------SPN------HVKITDFGLARLLEG  161 (303)
T ss_pred             HHHhhcCeeccccccceeeec-------CCC------ceEEccccccccccC
Confidence            889999999999999999998       566      899999999987653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.23  E-value=4.9e-11  Score=124.43  Aligned_cols=129  Identities=11%  Similarity=0.044  Sum_probs=79.9

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK  481 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~  481 (581)
                      ...++||||++|.++.+++......   ......++..++.+ +..+|..|++|+|+||+||++.       .++     
T Consensus        72 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~a-L~~lH~~~ivHrDlkp~Nill~-------~~~-----  138 (328)
T cd08226          72 SWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRG-LNYLHQNGYIHRNIKASHILIS-------GDG-----  138 (328)
T ss_pred             CceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEe-------CCC-----
Confidence            3457999999999999987643211   11112344444444 7789999999999999999998       666     


Q ss_pred             CeEEEEecccccccCHhhH-H-HHHHHHHHHHhhcHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          482 PHVIFLDVGMTAELSKTDR-V-NLVEFFKAVARRDGRTAAECTLRL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       482 ~~lvLiDFGl~~~L~~~~r-~-~l~~l~~Al~~~D~~~~~e~ll~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .+++.|||.+........ . .....-........+.++|.+..- .......|.|+|+..+.+++.+
T Consensus       139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g  206 (328)
T cd08226         139 -LVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATG  206 (328)
T ss_pred             -cEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhC
Confidence             899999986543322110 0 000000000001124556665432 2234567999999999999876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.22  E-value=4e-11  Score=119.17  Aligned_cols=119  Identities=17%  Similarity=0.142  Sum_probs=76.9

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ..+++|||++|++|.+++..... .......++..++.+ +..+|..|++|+|+||.||+++       .++      .+
T Consensus        59 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~-l~~lH~~~i~H~dlkp~Nil~~-------~~~------~~  124 (237)
T cd05576          59 SVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVA-LDALHREGIVCRDLNPNNILLD-------DRG------HI  124 (237)
T ss_pred             eEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHhCCeeccCCCHHHEEEc-------CCC------CE
Confidence            34799999999999988754221 111122344444444 6789999999999999999998       666      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +++|||....+........        ....+.+.|.. ..+......|.++++..+.+++.+
T Consensus       125 ~l~df~~~~~~~~~~~~~~--------~~~~y~aPE~~-~~~~~~~~~DvwslG~il~el~~g  178 (237)
T cd05576         125 QLTYFSRWSEVEDSCDGEA--------VENMYCAPEVG-GISEETEACDWWSLGAILFELLTG  178 (237)
T ss_pred             EEecccchhccccccccCC--------cCccccCCccc-CCCCCCchhhHHHHHHHHHHHHHC
Confidence            9999998765543211100        01113333332 112233456888888888888765

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=99.22  E-value=8.3e-11  Score=116.78  Aligned_cols=74  Identities=26%  Similarity=0.345  Sum_probs=57.3

Q ss_pred             cccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccC
Q 008021          400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFR  479 (581)
Q Consensus       400 ~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~  479 (581)
                      ...+++..+|+|||++|.++.+..+-       ...+++.+.+ .++++|.+|++|+||||||++++       .+    
T Consensus       111 ~~~~~~~~~ll~EYIeG~~l~d~~~i-------~e~~~~ki~~-~ikqlH~~G~~HGD~hpgNFlv~-------~~----  171 (229)
T PF06176_consen  111 IFRYTSSYVLLMEYIEGVELNDIEDI-------DEDLAEKIVE-AIKQLHKHGFYHGDPHPGNFLVS-------NN----  171 (229)
T ss_pred             eccceeEEEEEEEEecCeecccchhc-------CHHHHHHHHH-HHHHHHHcCCccCCCCcCcEEEE-------CC----
Confidence            34567788999999999999886421       1234444443 48999999999999999999998       44    


Q ss_pred             CCCeEEEEeccccccc
Q 008021          480 SKPHVIFLDVGMTAEL  495 (581)
Q Consensus       480 ~~~~lvLiDFGl~~~L  495 (581)
                         .+.+|||+..+..
T Consensus       172 ---~i~iID~~~k~~~  184 (229)
T PF06176_consen  172 ---GIRIIDTQGKRMS  184 (229)
T ss_pred             ---cEEEEECcccccc
Confidence               5999999987753

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.22  E-value=1.1e-10  Score=129.82  Aligned_cols=77  Identities=21%  Similarity=0.298  Sum_probs=55.3

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcc------------h-------------hhHHHHHHHHHHHHHHHhhhCCeEecCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGH------------E-------------RLKSALAHIGTHALLKMLLVDNFIHADMH  459 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~------------~-------------~~~~~la~~~i~a~l~~L~~~G~~H~DlH  459 (581)
                      ...+|||||++|.+|.++++...+.            .             .....++..++. .+..+|..|++|+|+|
T Consensus       258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~-aL~~lH~~~ivHrDLK  336 (507)
T PLN03224        258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLT-GLRKLHRIGIVHRDIK  336 (507)
T ss_pred             CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHH-HHHHHHHCCeecCCCc
Confidence            3468999999999999988642110            0             001122223332 3677999999999999


Q ss_pred             CCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       460 PGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      |+|||++       .++      .++|+|||++..+
T Consensus       337 p~NILl~-------~~~------~~kL~DFGla~~~  359 (507)
T PLN03224        337 PENLLVT-------VDG------QVKIIDFGAAVDM  359 (507)
T ss_pred             hHhEEEC-------CCC------cEEEEeCcCcccc
Confidence            9999998       566      8999999998654

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.21  E-value=7.3e-11  Score=121.62  Aligned_cols=129  Identities=12%  Similarity=0.073  Sum_probs=84.4

Q ss_pred             CCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK  481 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~  481 (581)
                      ...+++|||++|.++.+++......   ......++..++.+ +..||..|++|+|++|+||+++       .+|     
T Consensus        72 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~-L~~LH~~~ivH~dlk~~Nili~-------~~~-----  138 (314)
T cd08216          72 SELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNA-LDYIHSKGFIHRSVKASHILLS-------GDG-----  138 (314)
T ss_pred             CeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHH-HHHHHHCCeecCCCCcceEEEe-------cCC-----
Confidence            3457999999999999988643211   11122344444444 7889999999999999999999       667     


Q ss_pred             CeEEEEecccccccCHhhHH--HHHHHHHHHHhhcHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          482 PHVIFLDVGMTAELSKTDRV--NLVEFFKAVARRDGRTAAECTLRL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       482 ~~lvLiDFGl~~~L~~~~r~--~l~~l~~Al~~~D~~~~~e~ll~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .+++.|||.+..+......  ..............+.+.|.+..- .......|.|+|+..+.+++.+
T Consensus       139 -~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g  206 (314)
T cd08216         139 -KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANG  206 (314)
T ss_pred             -ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhC
Confidence             8999999988766432221  111111111222345566665432 2344568999999999998876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.21  E-value=1.5e-11  Score=135.28  Aligned_cols=120  Identities=19%  Similarity=0.141  Sum_probs=83.3

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEE
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIF  486 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvL  486 (581)
                      -.+|||.++|.-+-+-+............++..++.+ +..||.+|+||||+||+|||+.   .   ..|      +|.|
T Consensus       391 ~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~A-v~~LH~~gvvhRDLkp~NIL~~---~---~~g------~lrl  457 (612)
T KOG0603|consen  391 IYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSA-VDYLHEQGVVHRDLKPGNILLD---G---SAG------HLRL  457 (612)
T ss_pred             eeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHH-HHHHHhcCeeecCCChhheeec---C---CCC------cEEE
Confidence            3599999999877665433222222223355555544 8889999999999999999994   0   556      8999


Q ss_pred             EecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       487 iDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +|||...++.++.       ..- .-.+.+-+.|.+- ...+...-|.|.++..+.+++.+.
T Consensus       458 tyFG~a~~~~~~~-------~tp-~~t~~y~APEvl~-~~~yt~acD~WSLGvlLy~ML~G~  510 (612)
T KOG0603|consen  458 TYFGFWSELERSC-------DTP-ALTLQYVAPEVLA-IQEYTEACDWWSLGVLLYEMLTGR  510 (612)
T ss_pred             EEechhhhCchhh-------ccc-chhhcccChhhhc-cCCCCcchhhHHHHHHHHHHHhCC
Confidence            9999999988761       010 1123445666665 344445669999999999999883

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.21  E-value=3.1e-11  Score=140.61  Aligned_cols=148  Identities=18%  Similarity=0.228  Sum_probs=88.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||.||+|+||+|+..+        |+.||+||+.|-..    +|+.|...+..                        
T Consensus       703 ~~e~G~g~y~~vy~a~~~~--------~~~~alK~e~P~~~----WEfYI~~q~~~------------------------  746 (974)
T KOG1166|consen  703 SKEIGEGSYGSVYVATHSN--------GKLVALKVEKPPNP----WEFYICLQVME------------------------  746 (974)
T ss_pred             EeeeccccceEEEEeecCC--------CcEEEEEeecCCCc----eeeeehHHHHH------------------------
Confidence            4679999999999999865        69999999998632    22222211110                        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcch-hhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE-RLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~-~~~~~la~~~i~a~l~~  447 (581)
                        .|. ..+..-+..+...             .-+....+||+||.+-++|-+++...+... .+.--+...++ .++++
T Consensus       747 --RLk-~~~~~~~~~~~~a-------------~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml-~ive~  809 (974)
T KOG1166|consen  747 --RLK-PQMLPSIMHISSA-------------HVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQML-RIVEH  809 (974)
T ss_pred             --hhc-hhhhcchHHHHHH-------------HccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHH-HHHHH
Confidence              000 0000000001000             113455689999999999999886322111 01111222222 34889


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ||..|||||||||.|.|++........      ..-|.|||||.+-.+
T Consensus       810 lH~~~IIHgDiKPDNfll~~~~~~~~~------~~~l~lIDfG~siDm  851 (974)
T KOG1166|consen  810 LHAMGIIHGDIKPDNFLLRREICADSD------SKGLYLIDFGRSIDM  851 (974)
T ss_pred             HHhcceecccCCcceeEeecccCCCCc------ccceEEEecccceee
Confidence            999999999999999999853322111      236999999986543

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.20  E-value=2.8e-11  Score=132.66  Aligned_cols=188  Identities=15%  Similarity=0.088  Sum_probs=125.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ..-||+|.+|.|-.|+...+       |.+||||+.+..--+..                          ...     .+
T Consensus        61 ~~tig~g~f~~V~La~~~~t-------~~~VaiK~idkt~ln~~--------------------------~~~-----k~  102 (596)
T KOG0586|consen   61 IKTIGKGNFAKVKLARHILT-------GTEVAIKIIDKTQLNPS--------------------------KRQ-----KL  102 (596)
T ss_pred             eeeeccceeEEEEeeEecCC-------CceEEEEEehhcccChH--------------------------HHH-----HH
Confidence            56799999999999999876       79999998664311100                          000     01


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCC--CcEEEEeccCCccHHHHHHhhhcchh-hHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH--PAVLVETYEQGECVSRYVDELQGHER-LKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t--~~VLVmEyi~G~~L~~~l~~~~~~~~-~~~~la~~~i~a~l  445 (581)
                      .+      |.+-+..+     +++++  -+.|....+  .-+|||||..|+.+.+++........ .....-...+.+ +
T Consensus       103 ~r------ev~imk~l-----~HPnI--vkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsa-v  168 (596)
T KOG0586|consen  103 GR------EVDIMKSL-----NHPNI--VKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSA-V  168 (596)
T ss_pred             HH------HHHHHHhc-----CCcce--eeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHH-H
Confidence            11      22212111     12222  123333333  33799999999999999865332211 112222333333 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh-HHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD-RVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~-r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +.+|.++|+|+|||..|||++       .+.      .++|.|||+...++... -+.+|       ---.+.+.|++..
T Consensus       169 eYcH~k~ivHrdLk~eNilL~-------~~m------nikIaDfgfS~~~~~~~~lqt~c-------gsppyAaPEl~~g  228 (596)
T KOG0586|consen  169 EYCHSKNIVHRDLKAENILLD-------ENM------NIKIADFGFSTFFDYGLMLQTFC-------GSPPYAAPELFNG  228 (596)
T ss_pred             HHHhhcceeccccchhhcccc-------ccc------ceeeeccccceeecccccccccC-------CCCCccChHhhcC
Confidence            889999999999999999998       444      69999999999887532 22222       3346788999988


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .....+..|.|....++..++.+.
T Consensus       229 ~~y~gpe~D~Wslgvvly~LV~Gs  252 (596)
T KOG0586|consen  229 KKYDGPEVDIWSLGVVLYALVEGS  252 (596)
T ss_pred             cccCCcceehhhhhhhheeeeecc
Confidence            888888899999999999998885

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.19  E-value=7.2e-11  Score=118.74  Aligned_cols=202  Identities=17%  Similarity=0.162  Sum_probs=129.7

Q ss_pred             hhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          282 EIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       282 eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      +.|...+ .+-+|.|..+.|.|+..+.+       |.+.|+|+.--.....                        . .+.
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t-------~~e~a~kii~~~at~~------------------------~-~e~   61 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKET-------GKEFAVKIIDVTATTE------------------------S-GET   61 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhccc-------ccceeEEEEEeccccc------------------------C-Ccc
Confidence            4566666 56899999999999999875       7889999864321110                        0 112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhh-cchhhHHHHHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHI  439 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~-~~~~~~~~la~~  439 (581)
                      ..++.+...+|++..+.          ..+++.+.--...++-.+=-.||.|.++-+.|-|++.+.- -..+....+.+.
T Consensus        62 ~~~~~EaT~~Ev~ILRq----------v~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrq  131 (411)
T KOG0599|consen   62 PYEMREATRQEISILRQ----------VMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQ  131 (411)
T ss_pred             HHHHHHHHHHHHHHHHH----------hcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHH
Confidence            44444455555554433          2344444322222222333468999999999999986521 223334556666


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhH-HHHHHHHHHHHhhcHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR-VNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r-~~l~~l~~Al~~~D~~~~  518 (581)
                      +.+. ...+|..+|+|||+||.|||++       ++.      +|+|.|||.++++.+..+ +++|       -.-+|.+
T Consensus       132 lfeg-VeylHa~~IVHRDLKpENILld-------dn~------~i~isDFGFa~~l~~GekLrelC-------GTPgYLA  190 (411)
T KOG0599|consen  132 LFEG-VEYLHARNIVHRDLKPENILLD-------DNM------NIKISDFGFACQLEPGEKLRELC-------GTPGYLA  190 (411)
T ss_pred             HHHH-HHHHHHhhhhhcccChhheeec-------ccc------ceEEeccceeeccCCchhHHHhc-------CCCcccC
Confidence            6655 6779999999999999999998       555      899999999999988654 3433       3345555


Q ss_pred             HHHHHhhcC------CCCCCCHHHHHHHHHHhhhH
Q 008021          519 AECTLRLSK------QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       519 ~e~ll~l~~------~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|.+ +.+.      +....|.|+.+-.|..|+.+
T Consensus       191 PEti-kC~m~e~~pGYs~EVD~Wa~GVImyTLLaG  224 (411)
T KOG0599|consen  191 PETI-KCSMYENHPGYSKEVDEWACGVIMYTLLAG  224 (411)
T ss_pred             hhhe-eeecccCCCCccchhhHHHHHHHHHHHHcC
Confidence            5544 3222      22345777777777777655

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.18  E-value=1.8e-10  Score=115.89  Aligned_cols=191  Identities=16%  Similarity=0.082  Sum_probs=106.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|.++.. +   ..|+.||||+...+......                                   
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~-~---~~~~~~aiK~~~~~~~~~~~-----------------------------------   44 (273)
T cd05074           4 GRMLGKGEFGSVREAQLKSE-D---GSFQKVAVKMLKADIFSSSD-----------------------------------   44 (273)
T ss_pred             hhcccCCCCCCEEeeEeecc-C---CCceEEEEEEeccccCChHH-----------------------------------
Confidence            46799999999999998642 1   23689999997665322100                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--------CCcEEEEeccCCccHHHHHHhhhc-------chhhH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--------HPAVLVETYEQGECVSRYVDELQG-------HERLK  433 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--------t~~VLVmEyi~G~~L~~~l~~~~~-------~~~~~  433 (581)
                        .-++.+|.+.+.++.     +++  +.+.+....        .-.++++||.+++++.+++.....       .....
T Consensus        45 --~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~  115 (273)
T cd05074          45 --IEEFLREAACMKEFD-----HPN--VIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTL  115 (273)
T ss_pred             --HHHHHHHHHHHhcCC-----CCC--cceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHH
Confidence              011233443333221     111  112221110        112589999999999887642110       11111


Q ss_pred             HHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHH-HHHHHHHHHh
Q 008021          434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVN-LVEFFKAVAR  512 (581)
Q Consensus       434 ~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~-l~~l~~Al~~  512 (581)
                      ..++..++.+ +..+|..|++|+|++|.||++.       .++      .++++|||.+..+....... .....    .
T Consensus       116 ~~~~~~i~~~-l~~lH~~~i~H~dikp~nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~----~  177 (273)
T cd05074         116 VRFMIDIASG-MEYLSSKNFIHRDLAARNCMLN-------ENM------TVCVADFGLSKKIYSGDYYRQGCASK----L  177 (273)
T ss_pred             HHHHHHHHHH-HHHHHhCCEeecccchhhEEEc-------CCC------CEEECcccccccccCCcceecCCCcc----C
Confidence            3344444433 6788999999999999999998       566      89999999988654321100 00000    0


Q ss_pred             hcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          513 RDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       513 ~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .-.+..++.+. -.......|.++|+..+.+++.
T Consensus       178 ~~~~~~pe~~~-~~~~~~~sDi~slG~il~el~~  210 (273)
T cd05074         178 PVKWLALESLA-DNVYTTHSDVWAFGVTMWEIMT  210 (273)
T ss_pred             chhhcCHhHHh-cCccchhhhhHHHHHHHHHHhh
Confidence            00112223222 1222345577888877777765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.18  E-value=1.1e-11  Score=124.63  Aligned_cols=36  Identities=28%  Similarity=0.595  Sum_probs=32.9

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      +||++|||+||.|||++       ..|      .|+|+|||+++.+.+.
T Consensus       210 KH~viHRDvKPSNILlD-------e~G------niKlCDFGIsGrlvdS  245 (391)
T KOG0983|consen  210 KHGVIHRDVKPSNILLD-------ERG------NIKLCDFGISGRLVDS  245 (391)
T ss_pred             hcceeecccCccceEEc-------cCC------CEEeecccccceeecc
Confidence            69999999999999999       778      9999999999988654

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.17  E-value=1.8e-10  Score=116.67  Aligned_cols=194  Identities=14%  Similarity=0.080  Sum_probs=113.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||+|++|.||+|....+.   ...++.|++|+........                                     
T Consensus        11 ~~~i~~g~~g~V~~~~~~~~~---~~~~~~v~~k~~~~~~~~~-------------------------------------   50 (280)
T cd05043          11 SDLLQEGTFGRIFYGILIDEK---PGKEEEVFVKTVKDHASEI-------------------------------------   50 (280)
T ss_pred             eeeecccCCceEEEEEEecCC---CCceeEEEEEEccCCCCHH-------------------------------------
Confidence            467999999999999987521   0125889999865432110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccc-cccCCCCcEEEEeccCCccHHHHHHhhhcc---------hhhHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKP-VYPLVHPAVLVETYEQGECVSRYVDELQGH---------ERLKSALAH  438 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~-~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~---------~~~~~~la~  438 (581)
                       +.-++.+|...+.++     .++++.-+.- .........+++||++|.+|.+++......         ......++.
T Consensus        51 -~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~  124 (280)
T cd05043          51 -QVTLLLQESCLLYGL-----SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAI  124 (280)
T ss_pred             -HHHHHHHHHHHHHhC-----CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHH
Confidence             011233444444333     1222211111 111124568999999999999998653211         111123443


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ +..+|..|++|+|++|.||+++       .++      .++++|||+++.+.+........   .......+.+
T Consensus       125 ~i~~~-l~~LH~~~i~H~di~p~nil~~-------~~~------~~kl~d~g~~~~~~~~~~~~~~~---~~~~~~~y~a  187 (280)
T cd05043         125 QIACG-MSYLHKRGVIHKDIAARNCVID-------EEL------QVKITDNALSRDLFPMDYHCLGD---NENRPVKWMA  187 (280)
T ss_pred             HHHHH-HHHHHHCCEeecccCHhhEEEc-------CCC------cEEECCCCCcccccCCceEEeCC---CCCcchhccC
Confidence            44444 7789999999999999999998       566      89999999988664322110000   0000112344


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .|.+.. .......|.++|+..+.++++
T Consensus       188 pE~~~~-~~~~~~~Di~slG~~l~el~~  214 (280)
T cd05043         188 LESLVN-KEYSSASDVWSFGVLLWELMT  214 (280)
T ss_pred             HHHHhc-CCCCchhhHHHhHHHHHHHhc
Confidence            554433 233445688888888888775

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.17  E-value=3.2e-12  Score=127.14  Aligned_cols=217  Identities=12%  Similarity=0.052  Sum_probs=131.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      .-||+|.+|.|++|+.+++       |+.||+|..--+                               ..-+.|.....
T Consensus        23 ~kigqGtfgeVFkAr~~n~-------~kkvalkkvlme-------------------------------neKeGfpital   64 (376)
T KOG0669|consen   23 AKIGQGTFGEVFKARSKNT-------GKKVALKKVLME-------------------------------NEKEGFPITAL   64 (376)
T ss_pred             HhcCCchHHHHHHHhhcCc-------cchhHHHHHHHh-------------------------------ccccCCcHHHH
Confidence            5699999999999999886       788998842100                               00011122223


Q ss_pred             HHHHHHHH-----HHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHH
Q 008021          370 SQVDLARE-----AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTH  442 (581)
Q Consensus       370 ~ElDf~~E-----a~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~  442 (581)
                      +|++...-     ..|+....+.+..      |  .......-+||+.+|+- .|.-++.+...  ....-+.....+. 
T Consensus        65 reikiL~~lkHenv~nliEic~tk~T------p--~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm-  134 (376)
T KOG0669|consen   65 REIKILQLLKHENVVNLIEICRTKAT------P--TNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLM-  134 (376)
T ss_pred             HHHHHHHHhcchhHHHHHHHHhhccC------C--cccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHH-
Confidence            34444332     1233333222211      1  11112234699999964 34444322100  0001122233333 


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      .-+..+|+..++|||+||.|+|++       .+|      .++|.|||+++.++......=-+ +..-+-.=+|+-.|.+
T Consensus       135 ~GL~~iHr~kilHRDmKaaNvLIt-------~dg------ilklADFGlar~fs~~~n~~kpr-ytnrvvTLwYrppEll  200 (376)
T KOG0669|consen  135 NGLYYIHRNKILHRDMKAANVLIT-------KDG------ILKLADFGLARAFSTSKNVVKPR-YTNRVVTLWYRPPELL  200 (376)
T ss_pred             HHHHHHHHhhHHhhcccHhhEEEc-------CCc------eEEeeccccccceecccccCCCC-cccceeeeecCCHHHh
Confidence            237789999999999999999999       788      99999999997765432111000 0111112356788999


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH--hhccccHHHHHHHHHHHHHHh
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG--VLRRVIWSILLSACSNYLRKF  568 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~--~~~~~~~~~ll~~~~~~lr~~  568 (581)
                      +.--.+.+++|.|.-.|.|.++..+  +++....+..+.-++.++-.+
T Consensus       201 LG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~  248 (376)
T KOG0669|consen  201 LGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI  248 (376)
T ss_pred             hcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence            8888888899999999999999987  477776777777777776443

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.16  E-value=1.8e-11  Score=122.72  Aligned_cols=204  Identities=14%  Similarity=0.143  Sum_probs=125.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ...||.|+||.|++-.++.+       |+..|||-.+-...   +.|                             ...+
T Consensus        69 lg~iG~G~fG~V~KM~hk~s-------g~~mAVKrIr~~n~---~ke-----------------------------q~rl  109 (361)
T KOG1006|consen   69 LGEIGNGAFGTVNKMLHKPS-------GKLMAVKRIRSNNI---EKE-----------------------------QKRL  109 (361)
T ss_pred             HHHhcCCcchhhhhhhcCcc-------CcEEEEEEeeeccc---hHH-----------------------------HHHH
Confidence            35699999999999999876       79999997665422   111                             1123


Q ss_pred             HHHHHHHH---HHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhh--cchhhHHHH----HHH
Q 008021          369 MSQVDLAR---EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ--GHERLKSAL----AHI  439 (581)
Q Consensus       369 ~~ElDf~~---Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~--~~~~~~~~l----a~~  439 (581)
                      ..|+|-..   +..|+.+|....-.             .+.-++.||.++ .+++.+-+..-  ....+++.+    .-.
T Consensus       110 l~e~d~~mks~~cp~IVkfyGa~F~-------------EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~Itva  175 (361)
T KOG1006|consen  110 LMEHDTVMKSSNCPNIVKFYGALFS-------------EGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVA  175 (361)
T ss_pred             HHHHHHHHhhcCCcHHHHHhhhhhc-------------CCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeee
Confidence            33444332   23466666543211             123468999885 45655432110  001111221    111


Q ss_pred             HHHHHHHHhh-hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          440 GTHALLKMLL-VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       440 ~i~a~l~~L~-~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .+++ |..|- +..+||||+||.|||++       +.|      .|+|+|||+++.|-+..-..    ..  +-=..|-|
T Consensus       176 tV~A-L~yLK~~lkiIHRDvKPSNILld-------r~G------~vKLCDFGIcGqLv~SiAkT----~d--aGCrpYmA  235 (361)
T KOG1006|consen  176 TVDA-LDYLKEELKIIHRDVKPSNILLD-------RHG------DVKLCDFGICGQLVDSIAKT----VD--AGCRPYMA  235 (361)
T ss_pred             ehhH-HHHHHHHhhhhhccCChhheEEe-------cCC------CEeeecccchHhHHHHHHhh----hc--cCCccccC
Confidence            2233 44443 46899999999999999       788      99999999999875543221    00  01123455


Q ss_pred             HHHHHhhcC-CCCCCCHHHHHHHHHHhhhHhhccccHHHHHHHHHHHH
Q 008021          519 AECTLRLSK-QQNCPNPKAFIEWMRLLPSGVLRRVIWSILLSACSNYL  565 (581)
Q Consensus       519 ~e~ll~l~~-~~~~~D~~~f~~~l~~l~~~~~~~~~~~~ll~~~~~~l  565 (581)
                      +|.+--.+. +.-..|.|++.-.|.|+.++-+.=..|+.++..+.++.
T Consensus       236 PERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv  283 (361)
T KOG1006|consen  236 PERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV  283 (361)
T ss_pred             hhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH
Confidence            555533333 33346889999999999999887788999888887774

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.14  E-value=1.7e-10  Score=121.18  Aligned_cols=144  Identities=19%  Similarity=0.235  Sum_probs=92.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchh---hHHHHHHHHHHHHHHhcccccccccChhHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE---SIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA  365 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~---~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~  365 (581)
                      .+.||+|++|+||.+....+  +    .+.+|+|+.......   .+..+..+                           
T Consensus        23 ~~~iG~G~fG~V~~v~~~~~--~----~~~~a~K~e~~~~~~~~~~l~~E~~v---------------------------   69 (322)
T KOG1164|consen   23 GKKIGEGGFGAVYLVSDKSE--K----NKEYAKKLEKKELGSKPSVLKIEIQV---------------------------   69 (322)
T ss_pred             eeeccccCCceEEEEEecCC--C----CeeEEEEEEEecccCCCccchhHHHH---------------------------
Confidence            68899999999999998763  1    368999987653211   12222222                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CC--CcEEEEeccCCccHHHHHHhhhcchhhH---HHHHHH
Q 008021          366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VH--PAVLVETYEQGECVSRYVDELQGHERLK---SALAHI  439 (581)
Q Consensus       366 ~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t--~~VLVmEyi~G~~L~~~l~~~~~~~~~~---~~la~~  439 (581)
                                     +..+..   ....-.+|..+... .+  -+++||+.+ |.+|.++........-..   ..++..
T Consensus        70 ---------------l~~l~~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q  130 (322)
T KOG1164|consen   70 ---------------LKKLEK---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQ  130 (322)
T ss_pred             ---------------HHHHhh---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHH
Confidence                           222211   11223466665444 22  368999987 999999875433111112   334444


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccc
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA  493 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~  493 (581)
                      .+.+ ++.+|..||+|||+||+|+++......  ...      .+.++|||+++
T Consensus       131 ~l~~-l~~lH~~G~iHRDiKp~N~~~g~~~~~--~~~------~~~llDfGlar  175 (322)
T KOG1164|consen  131 NLNA-LEDLHSKGFIHRDIKPENFVVGQSSRS--EVR------TLYLLDFGLAR  175 (322)
T ss_pred             HHHH-HHHHHhcCcccCCcCHHHeeecCCCCc--ccc------eEEEEecCCCc
Confidence            4444 899999999999999999999832100  112      79999999998

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.13  E-value=2.2e-10  Score=122.47  Aligned_cols=171  Identities=19%  Similarity=0.210  Sum_probs=111.6

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +-||+|-||.||+|.+.         ++.||||+..+.-.+....+-.|..        .|.+                 
T Consensus       216 eli~~Grfg~V~KaqL~---------~~~VAVKifp~~~kqs~~~Ek~Iy~--------lp~m-----------------  261 (534)
T KOG3653|consen  216 ELIGRGRFGCVWKAQLD---------NRLVAVKIFPEQEKQSFQNEKNIYS--------LPGM-----------------  261 (534)
T ss_pred             HHhhcCccceeehhhcc---------CceeEEEecCHHHHHHHHhHHHHHh--------ccCc-----------------
Confidence            56899999999999997         4899999976654444333332222        1222                 


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL  449 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~  449 (581)
                             +..|+.+|...-+.....         -..-.||+||-+-++|.+|+......=..--.++..+++- +..||
T Consensus       262 -------~h~nIl~Fi~~ekr~t~~---------~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarG-La~LH  324 (534)
T KOG3653|consen  262 -------KHENILQFIGAEKRGTAD---------RMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARG-LAHLH  324 (534)
T ss_pred             -------cchhHHHhhchhccCCcc---------ccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHH-HHHhc
Confidence                   344666664332221111         1133599999999999999976432222223455555544 66677


Q ss_pred             h---------CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhH--------------------
Q 008021          450 V---------DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR--------------------  500 (581)
Q Consensus       450 ~---------~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r--------------------  500 (581)
                      +         -.|.|||+|..||||.       .|+      .-+|.|||++..+++..-                    
T Consensus       325 ee~p~~d~~Kp~IaHRDlkSkNVLvK-------~Dl------TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLE  391 (534)
T KOG3653|consen  325 EELPRGDHHKPPIAHRDLKSKNVLVK-------NDL------TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLE  391 (534)
T ss_pred             ccCCcCCCCCCccccccccccceEEc-------cCC------cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHh
Confidence            4         5899999999999999       788      999999999988754211                    


Q ss_pred             --HHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          501 --VNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       501 --~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                        .+|.+ =.|+-+-|.|.++-++.++
T Consensus       392 gainl~d-~~Afkr~DvYamgLVLWEi  417 (534)
T KOG3653|consen  392 GAINLQD-RDAFKRIDVYAMGLVLWEI  417 (534)
T ss_pred             hhccccc-HHHHHHHHHHHHHHHHHHH
Confidence              12222 3455566777777777665

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.11  E-value=1.3e-10  Score=122.72  Aligned_cols=208  Identities=16%  Similarity=0.158  Sum_probs=128.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCc-hhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV-GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v-~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      .++||+|+|+.||+|++...    .+.++.||+|-.++-- ...                                    
T Consensus        41 v~kigeGsFssv~~a~~~~~----~~~~~~valk~i~~ts~p~r------------------------------------   80 (418)
T KOG1167|consen   41 VNKIGEGSFSSVYKATDIEQ----DTKRRYVALKAIYRTSSPSR------------------------------------   80 (418)
T ss_pred             hccccccchhhhhhhhHhhh----ccccceEeeeecccccCchH------------------------------------
Confidence            67899999999999999752    1236899999765431 112                                    


Q ss_pred             HHHHHHHHHHH---HHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          368 MMSQVDLAREA---AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       368 l~~ElDf~~Ea---~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                      +..|+.+..++   .|+......++....|             ++||||.+-....++...... ... ..-...+..+ 
T Consensus        81 i~~El~~L~~~gG~~ni~~~~~~~rnnd~v-------------~ivlp~~~H~~f~~l~~~l~~-~~i-~~Yl~~ll~A-  144 (418)
T KOG1167|consen   81 ILNELEMLYRLGGSDNIIKLNGCFRNNDQV-------------AIVLPYFEHDRFRDLYRSLSL-AEI-RWYLRNLLKA-  144 (418)
T ss_pred             HHHHHHHHHHhccchhhhcchhhhccCCee-------------EEEecccCccCHHHHHhcCCH-HHH-HHHHHHHHHH-
Confidence            23344444443   2444444445444443             489999999888887654321 111 1112222333 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHH---------------HHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF---------------FKA  509 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l---------------~~A  509 (581)
                      +..+|..||+|||+||+|+|..   +   ..+      +-+|+|||++...+...+..-++-               ...
T Consensus       145 l~~~h~~GIvHRDiKpsNFL~n---~---~t~------rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~  212 (418)
T KOG1167|consen  145 LAHLHKNGIVHRDIKPSNFLYN---R---RTQ------RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQS  212 (418)
T ss_pred             hhhhhccCccccCCCccccccc---c---ccC------CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccc
Confidence            7789999999999999999998   2   445      788999999984332221111111               000


Q ss_pred             HH------------------------hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh---hccccHHHHHHHHH
Q 008021          510 VA------------------------RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV---LRRVIWSILLSACS  562 (581)
Q Consensus       510 l~------------------------~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~---~~~~~~~~ll~~~~  562 (581)
                      ++                        -..|.+++|++...+...+.+|.|+-+-.+-.+++..   ++-.+--+-+.++.
T Consensus       213 ~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~  292 (418)
T KOG1167|consen  213 VATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIA  292 (418)
T ss_pred             cccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHH
Confidence            00                        1123578899999888888999998777777776662   44444334444443


Q ss_pred             HH
Q 008021          563 NY  564 (581)
Q Consensus       563 ~~  564 (581)
                      .+
T Consensus       293 ti  294 (418)
T KOG1167|consen  293 TI  294 (418)
T ss_pred             HH
Confidence            33

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.11  E-value=4.2e-10  Score=121.04  Aligned_cols=199  Identities=18%  Similarity=0.154  Sum_probs=128.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ++.||+|-||.|-.|++-.+       |+.|||||...-                            .+++.-   ...+
T Consensus        23 ekTlG~GHFAVVKLArHVFT-------GekVAVKviDKT----------------------------KlD~~s---t~hl   64 (864)
T KOG4717|consen   23 EKTLGRGHFAVVKLARHVFT-------GEKVAVKVIDKT----------------------------KLDTLS---TGHL   64 (864)
T ss_pred             hhhhcCCceehhhhhhhhcc-------cceeEEEEeccc----------------------------ccchhh---hhHH
Confidence            67899999999999999887       799999996432                            111110   0112


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                      .+|      .+-+.-.     .+++|.  +.|.  +-.++-+|+.|.=+|+.|.+|+-..+.  ...+.++.-.+++.+ 
T Consensus        65 fqE------VRCMKLV-----QHpNiV--RLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~A-  130 (864)
T KOG4717|consen   65 FQE------VRCMKLV-----QHPNIV--RLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHA-  130 (864)
T ss_pred             HHH------HHHHHHh-----cCcCee--eeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHH-
Confidence            222      2222111     122221  2222  234677899999999999999843221  111112212222222 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhH-HHHHHHHHHHHhhcHHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR-VNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r-~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                      +..+|.-.+|||||||.|+.+-.      .-|      -++|.|||+.-.+.+..+ ..+|.-+       .|.++|.++
T Consensus       131 I~YCHqLHVVHRDLKPENVVFFE------KlG------lVKLTDFGFSNkf~PG~kL~TsCGSL-------AYSAPEILL  191 (864)
T KOG4717|consen  131 ISYCHQLHVVHRDLKPENVVFFE------KLG------LVKLTDFGFSNKFQPGKKLTTSCGSL-------AYSAPEILL  191 (864)
T ss_pred             HHHHhhhhhhcccCCcceeEEee------ecC------ceEeeeccccccCCCcchhhcccchh-------hccCchhhh
Confidence            44456667999999999998861      345      799999999988766544 3444222       367889998


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILL  558 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll  558 (581)
                      .-+...+.+|.|.+.-.+.-|+.+.  |++.+-++-|
T Consensus       192 GDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL  228 (864)
T KOG4717|consen  192 GDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL  228 (864)
T ss_pred             cCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh
Confidence            8888888999999999999999884  6665544433

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.11  E-value=4.6e-11  Score=138.86  Aligned_cols=126  Identities=14%  Similarity=0.065  Sum_probs=85.5

Q ss_pred             EEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEE
Q 008021          408 VLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVI  485 (581)
Q Consensus       408 VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lv  485 (581)
                      ++-||||+-.++.++++...-.  ...--.+-+.+++. +..+|..|+||||+||.||+++       +++      .|+
T Consensus       672 YIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEG-LaYIH~~giIHRDLKP~NIFLd-------~~~------~VK  737 (1351)
T KOG1035|consen  672 YIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEG-LAYIHDQGIIHRDLKPRNIFLD-------SRN------SVK  737 (1351)
T ss_pred             EEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHH-HHHHHhCceeeccCCcceeEEc-------CCC------Cee
Confidence            6799999999999988753321  11112333444444 7789999999999999999999       555      899


Q ss_pred             EEecccccccCH--hhHHHHHHHHHHH-----------HhhcHHHHHHHHHhhc--CCCCCCCHHHHHHHHHHhhhH
Q 008021          486 FLDVGMTAELSK--TDRVNLVEFFKAV-----------ARRDGRTAAECTLRLS--KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       486 LiDFGl~~~L~~--~~r~~l~~l~~Al-----------~~~D~~~~~e~ll~l~--~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.|||+++.+-.  +...+....+.-.           +-.--|.++|++-...  .+...+|+.+++-.+-|++-.
T Consensus       738 IGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP  814 (1351)
T KOG1035|consen  738 IGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP  814 (1351)
T ss_pred             ecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc
Confidence            999999987432  1111111111111           1111267888887777  577789999999999888755

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.11  E-value=3.5e-10  Score=113.06  Aligned_cols=121  Identities=11%  Similarity=0.075  Sum_probs=74.3

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCC
Q 008021          406 PAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS  480 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~  480 (581)
                      ..++||||++|.+|.+++.....     .......++..++.+ +..+|..|++|+|++|.||+++       . +    
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~lH~~~i~h~~l~~~nili~-------~-~----  142 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLG-VHYMHQRRILHRDLKAKNIFLK-------N-N----  142 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHH-HHHHHHcCccccCCChhheEee-------c-C----
Confidence            45799999999999988753211     111122344444444 6789999999999999999997       3 3    


Q ss_pred             CCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          481 KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       481 ~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                        .++++|||.+..+.......     ........+.+.|.+.. .......|.++|+..+.+++.+
T Consensus       143 --~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~  201 (260)
T cd08222         143 --LLKIGDFGVSRLLMGSCDLA-----TTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCL  201 (260)
T ss_pred             --CEeecccCceeecCCCcccc-----cCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhC
Confidence              69999999876553321100     00001112334444322 2233346788888777777655

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.09  E-value=2.1e-10  Score=126.69  Aligned_cols=184  Identities=14%  Similarity=0.097  Sum_probs=123.9

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      -.+|.|.+|.||-|+++++       ....|||-...    .                             -.++..-+.
T Consensus       581 vVLGKGTYG~VYA~RD~~t-------qvrIaIKEIpe----k-----------------------------dsr~~QPLh  620 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDT-------QVRIAIKEIPE----K-----------------------------DSREVQPLH  620 (1226)
T ss_pred             EEeecCceeEEEeeccccc-------eeEEEeeeccc----c-----------------------------cchhhccHH
Confidence            5799999999999999876       57889994321    1                             122333456


Q ss_pred             HHHHHHHH--HHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhH-HHHH---HHHHHH
Q 008021          370 SQVDLARE--AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLK-SALA---HIGTHA  443 (581)
Q Consensus       370 ~ElDf~~E--a~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~-~~la---~~~i~a  443 (581)
                      +|+.+...  .+|+.++-..+..+..+.             +-||-++|++|+.+++..=++-+.+ ..++   +.++ .
T Consensus       621 EEIaLH~~LrHkNIVrYLGs~senGf~k-------------IFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQIL-e  686 (1226)
T KOG4279|consen  621 EEIALHSTLRHKNIVRYLGSVSENGFFK-------------IFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQIL-E  686 (1226)
T ss_pred             HHHHHHHHHhhHhHHHHhhccCCCCeEE-------------EEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHH-H
Confidence            67776554  457777766655544333             7899999999999987632222111 2222   2222 2


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh--hHHHHHHHHHHHHhhcHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT--DRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~--~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      -++.||+..|||||+|-.|+||..      -.|      -+++.|||-++++..-  ..+.|..        .-.-+|-.
T Consensus       687 GLkYLHen~IVHRDIKGDNVLvNT------ySG------vlKISDFGTsKRLAginP~TETFTG--------TLQYMAPE  746 (1226)
T KOG4279|consen  687 GLKYLHENKIVHRDIKGDNVLVNT------YSG------VLKISDFGTSKRLAGINPCTETFTG--------TLQYMAPE  746 (1226)
T ss_pred             HhhhhhhcceeeccccCCcEEEee------ccc------eEEecccccchhhccCCcccccccc--------chhhhChH
Confidence            388899999999999999999982      456      8999999998876421  2233332        22233444


Q ss_pred             HHhhcC--CCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSK--QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~--~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++-|.  ++...|.|.|+|.+-|+.++
T Consensus       747 vIDqG~RGYG~aADIWS~GCT~vEMATG  774 (1226)
T KOG4279|consen  747 VIDQGPRGYGKAADIWSFGCTMVEMATG  774 (1226)
T ss_pred             hhccCCcCCCchhhhhhccceeEeeccC
Confidence            445555  33577999999999988766

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.08  E-value=1e-10  Score=129.44  Aligned_cols=193  Identities=20%  Similarity=0.190  Sum_probs=121.1

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +-||+||||.|++|.+... .|   +.-.||||+.+++....+                                     
T Consensus       116 e~LG~GsFgvV~rg~Wt~p-sg---k~V~VAVKclr~d~l~~~-------------------------------------  154 (1039)
T KOG0199|consen  116 ELLGEGSFGVVKRGTWTQP-SG---KHVNVAVKCLRDDSLNAI-------------------------------------  154 (1039)
T ss_pred             HHhcCcceeeEeeccccCC-CC---cEEeEEEEeccCCccchh-------------------------------------
Confidence            5689999999999999762 23   346899999998843211                                     


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHH---HHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA---HIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la---~~~i~a~l~  446 (581)
                       --||++|+.++-++.+.    .-|..-.++  +..+-.+|||.+++++|-+-+.........-..+.   ..++. .+.
T Consensus       155 -mddflrEas~M~~L~H~----hliRLyGvV--l~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~-aM~  226 (1039)
T KOG0199|consen  155 -MDDFLREASHMLKLQHP----HLIRLYGVV--LDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAK-AMQ  226 (1039)
T ss_pred             -HHHHHHHHHHHHhccCc----ceeEEeeee--ccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHH-HHH
Confidence             13678888888766421    111111111  23445689999999999987754111111112222   22222 255


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .|-..++||||+-.-|+++.       ...      .|+|+|||+++.|...+-.....   -=..=-+..++-.-+...
T Consensus       227 YLeskrlvHRDLAARNllla-------spr------tVKI~DFGLmRaLg~ned~Yvm~---p~rkvPfAWCaPEsLrh~  290 (1039)
T KOG0199|consen  227 YLESKRLVHRDLAARNLLLA-------SPR------TVKICDFGLMRALGENEDMYVMA---PQRKVPFAWCAPESLRHR  290 (1039)
T ss_pred             HHhhhhhhhhhhhhhhheec-------ccc------eeeeecccceeccCCCCcceEec---CCCcCcccccCHhHhccc
Confidence            56679999999999999998       333      79999999999987643222000   000000122333334555


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.|.|.-.|.|+|+.
T Consensus       291 kFShaSDvWmyGVTiWEMFty  311 (1039)
T KOG0199|consen  291 KFSHASDVWMYGVTIWEMFTY  311 (1039)
T ss_pred             cccccchhhhhhhhHHhhhcc
Confidence            556678999999999999865

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.08  E-value=2e-10  Score=128.52  Aligned_cols=181  Identities=20%  Similarity=0.348  Sum_probs=120.8

Q ss_pred             hhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHH
Q 008021          256 LHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD  335 (581)
Q Consensus       256 Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~D  335 (581)
                      ...-+.|+.+++-.+.+.+ |-+.++--+-.+ ++.||+|.||.|++|+++.  +|+  +-..||||.++-|-.+.    
T Consensus       603 ~k~YiDP~TYEDPnqAvre-FakEId~s~i~I-e~VIGaGEFGEVc~GrLk~--pgk--re~~VAIKTLK~Gytek----  672 (996)
T KOG0196|consen  603 TKTYIDPHTYEDPNQAVRE-FAKEIDPSCVKI-EKVIGAGEFGEVCSGRLKL--PGK--REITVAIKTLKAGYTEK----  672 (996)
T ss_pred             ceeecCCccccCccHHHHH-hhhhcChhheEE-EEEEecccccceecccccC--CCC--cceeEEEeeeccCccHH----
Confidence            4555677777664444432 222222212222 6899999999999999986  452  24789999988774432    


Q ss_pred             HHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccC
Q 008021          336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQ  415 (581)
Q Consensus       336 l~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~  415 (581)
                                                        +..||..||.-+-+|     ++++|.--+-+..-+.+-.++.||++
T Consensus       673 ----------------------------------qrrdFL~EAsIMGQF-----dHPNIIrLEGVVTks~PvMIiTEyME  713 (996)
T KOG0196|consen  673 ----------------------------------QRRDFLSEASIMGQF-----DHPNIIRLEGVVTKSKPVMIITEYME  713 (996)
T ss_pred             ----------------------------------HHhhhhhhhhhcccC-----CCCcEEEEEEEEecCceeEEEhhhhh
Confidence                                              346788888877555     23333322222222344578999999


Q ss_pred             CccHHHHHHhhhcchhhHHHH--HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccc
Q 008021          416 GECVSRYVDELQGHERLKSAL--AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA  493 (581)
Q Consensus       416 G~~L~~~l~~~~~~~~~~~~l--a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~  493 (581)
                      .++|+.+++...++-. ..++  .-+++.+-++.|-..|+|||||-.-||||+       .+-      .-++.|||+++
T Consensus       714 NGsLDsFLR~~DGqft-viQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVN-------snL------vCKVsDFGLSR  779 (996)
T KOG0196|consen  714 NGSLDSFLRQNDGQFT-VIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVN-------SNL------VCKVSDFGLSR  779 (996)
T ss_pred             CCcHHHHHhhcCCceE-eehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeec-------cce------EEEecccccee
Confidence            9999999976544321 1122  235566778889999999999999999998       443      67899999999


Q ss_pred             ccCHhh
Q 008021          494 ELSKTD  499 (581)
Q Consensus       494 ~L~~~~  499 (581)
                      .+.++.
T Consensus       780 vledd~  785 (996)
T KOG0196|consen  780 VLEDDP  785 (996)
T ss_pred             ecccCC
Confidence            885554

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.08  E-value=7.7e-10  Score=114.09  Aligned_cols=143  Identities=17%  Similarity=0.199  Sum_probs=93.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+||||..+.|+..-+       +++||||.-.-.-                   ..|        .+        
T Consensus        33 GkKIGeGsFG~lf~G~Nl~n-------ne~VAIKfEPrkS-------------------~AP--------QL--------   70 (449)
T KOG1165|consen   33 GKKIGEGSFGVLFLGKNLYN-------NEPVAIKFEPRKS-------------------EAP--------QL--------   70 (449)
T ss_pred             ccccccCcceeeeccccccc-------CceEEEEeccccC-------------------Ccc--------hH--------
Confidence            57899999999999998754       7999999632110                   012        11        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CC-CCcEEEEeccCCccHHHHHHhhhcchhhH--HHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LV-HPAVLVETYEQGECVSRYVDELQGHERLK--SALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~-t~~VLVmEyi~G~~L~~~l~~~~~~~~~~--~~la~~~i~a~  444 (581)
                            +.|-    |+.+.+..  ...+|.+|+- -| -.++||||.+ |.+|.|+.+-+...-..+  ..+|..++. -
T Consensus        71 ------rdEY----r~YKlL~g--~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~-r  136 (449)
T KOG1165|consen   71 ------RDEY----RTYKLLGG--TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMIT-R  136 (449)
T ss_pred             ------HHHH----HHHHHHcC--CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHH-H
Confidence                  1122    23333333  3457777742 22 3569999988 999999987644322222  234444433 3


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ++.+|.+.+|.||+||.|+||...  .+...      ..|.++||||+++.
T Consensus       137 ie~vH~k~LIYRDIKPdNFLIGrp--~~k~~------n~IhiiDFGmAK~Y  179 (449)
T KOG1165|consen  137 IEYVHEKDLIYRDIKPDNFLIGRP--GTKDA------NVIHIIDFGMAKEY  179 (449)
T ss_pred             HHHHHhcceeecccCccceeecCC--CCCCC------ceEEEEeccchhhh
Confidence            788999999999999999999842  11122      26899999999875

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.07  E-value=4e-09  Score=101.61  Aligned_cols=150  Identities=20%  Similarity=0.242  Sum_probs=101.1

Q ss_pred             CceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       288 d~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      +-+++-.|.-|.|+++...         |+..+||-..|.--                          +.+.+-.++.. 
T Consensus        11 ~l~likQGAEArv~~~~~~---------Ge~~iIK~Rf~K~Y--------------------------RHP~LD~kLtr-   54 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS---------GEAAIIKERFSKRY--------------------------RHPALDQKLTR-   54 (229)
T ss_pred             cceeeeccceeeEeeeccC---------CceeEEeecccccc--------------------------cchHHHHHHHH-
Confidence            4678889999999999884         69999997655422                          21221111111 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCC-ccHHHHHHhhhcchhhH---HHHHHHHHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG-ECVSRYVDELQGHERLK---SALAHIGTHA  443 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G-~~L~~~l~~~~~~~~~~---~~la~~~i~a  443 (581)
                          -.-.+||+.+.+++..     ++.+|.+|.--.....|.|||++| .++.+++..........   ..++..+- .
T Consensus        55 ----~Rt~~Ear~l~k~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG-~  124 (229)
T KOG3087|consen   55 ----KRTKQEARLLAKCRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIG-E  124 (229)
T ss_pred             ----HHHHHHHHHHHHHHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHH-H
Confidence                1124588888877654     788899887667788999999999 56777765422221111   23443332 3


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccc
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA  493 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~  493 (581)
                      .+.-||..+++|+||-..||++.       ++|   ++..+.+||||+..
T Consensus       125 ~igklH~ndiiHGDLTTSNill~-------~~~---~~~~~~lIdfgls~  164 (229)
T KOG3087|consen  125 LIGKLHDNDIIHGDLTTSNILLR-------SDG---NQITPILIDFGLSS  164 (229)
T ss_pred             HHHHhhhCCeecccccccceEEe-------cCC---CcCceEEEeecchh
Confidence            36678999999999999999998       443   23356999999864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.06  E-value=1.7e-10  Score=112.21  Aligned_cols=201  Identities=17%  Similarity=0.141  Sum_probs=122.1

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +-||.|++|||-+-++..+       |+..|||-.+-.+.                                .+..+.+.
T Consensus        52 ~elGrGayG~vekmrh~~s-------g~imAvKri~~tvn--------------------------------~q~q~r~L   92 (282)
T KOG0984|consen   52 EELGRGAYGVVEKMRHIQS-------GTIMAVKRIRATVN--------------------------------SQEQKRLL   92 (282)
T ss_pred             hhhcCCccchhhheeeccC-------CeEEEEeeehhhcC--------------------------------hHHHHHHH
Confidence            4599999999999999875       79999996543322                                11122334


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccc---cc--CCCCcEEEEeccCCccHHHHHHhh-hc----chhhHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPV---YP--LVHPAVLVETYEQGECVSRYVDEL-QG----HERLKSALAHI  439 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~---~~--l~t~~VLVmEyi~G~~L~~~l~~~-~~----~~~~~~~la~~  439 (581)
                      .|+|..+.               .+..|..+   ..  -+.+-.+.||-++ .+++.+-... ..    .+..-.++|-.
T Consensus        93 ~dldi~~r---------------~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~S  156 (282)
T KOG0984|consen   93 MDLDIIMR---------------TVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVS  156 (282)
T ss_pred             Hhhhhhcc---------------CCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHH
Confidence            44443221               11122211   11  1344468898874 5666654321 11    11222345555


Q ss_pred             HHHHHHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          440 GTHALLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       440 ~i~a~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .+++ +..||. -.++|||+||+|||++       .+|      +++++|||+++.|.+..-...-      +-=..|.+
T Consensus       157 vv~a-l~~L~~kL~vIHRDvKPsNiLIn-------~~G------qVKiCDFGIsG~L~dSiAkt~d------aGCkpYma  216 (282)
T KOG0984|consen  157 VVHA-LEFLHSKLSVIHRDVKPSNILIN-------YDG------QVKICDFGISGYLVDSIAKTMD------AGCKPYMA  216 (282)
T ss_pred             HHHH-HHHHHHHhhhhhccCCcceEEEc-------cCC------cEEEcccccceeehhhhHHHHh------cCCCccCC
Confidence            5555 666664 5899999999999999       888      9999999999998765433311      01123444


Q ss_pred             HHHHHh-hc--CCCCCCCHHHHHHHHHHhhhHhhccccHHHHHHHHHHHH
Q 008021          519 AECTLR-LS--KQQNCPNPKAFIEWMRLLPSGVLRRVIWSILLSACSNYL  565 (581)
Q Consensus       519 ~e~ll~-l~--~~~~~~D~~~f~~~l~~l~~~~~~~~~~~~ll~~~~~~l  565 (581)
                      .|.+-- +.  .+.-..|.|++.-.|-|+...-+.=.+|.+-+..+.++.
T Consensus       217 PEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvV  266 (282)
T KOG0984|consen  217 PERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVV  266 (282)
T ss_pred             hhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHh
Confidence            544421 11  222346899999888888777665666777666666654

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.06  E-value=3.5e-10  Score=123.17  Aligned_cols=191  Identities=15%  Similarity=0.088  Sum_probs=119.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+|+|+|++|||..|+++..       ..+|+||.+...   +|-.|-.+-         -+.   ++          .+
T Consensus       566 lq~lG~GAyGkV~lai~K~n-------~~eVViK~I~Ke---RIL~DtWvr---------Drk---LG----------tV  613 (772)
T KOG1152|consen  566 LQPLGEGAYGKVNLAIHKEN-------NYEVVIKMIFKE---RILVDTWVR---------DRK---LG----------TV  613 (772)
T ss_pred             eeeccccccceEEEeeeccc-------ceEEEeeehhhh---hhhhhhhhc---------ccc---cC----------cc
Confidence            58999999999999999875       689999975432   222221100         011   10          01


Q ss_pred             HHHHHHH--HH---HHHHHHHHHhcccCCCcccccccccCCCCcEEEEec-cCCccHHHHHHhhhcchhhHHHHHHHHHH
Q 008021          369 MSQVDLA--RE---AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETY-EQGECVSRYVDELQGHERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~--~E---a~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEy-i~G~~L~~~l~~~~~~~~~~~~la~~~i~  442 (581)
                      ..|+...  -+   ..|+.++.+.|+++...+             |+||- =+|..|-++++..+........+.-..+.
T Consensus       614 p~EIqIla~l~~~sH~NIlKlLdfFEddd~yy-------------l~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~  680 (772)
T KOG1152|consen  614 PSEIQILATLNKHSHENILKLLDFFEDDDYYY-------------LETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVV  680 (772)
T ss_pred             chhHHHHHHhhhcCccchhhhhheeecCCeeE-------------EEecCCCCCcchhhhhhccCccchHHHHHHHHHHH
Confidence            1122221  12   348888888888877665             56654 36778888886533221111222222233


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      +..+.+|..||+|||+|-.|+.|+       .+|      -++|||||.+......--..|.       -.=.+.++|++
T Consensus       681 agi~hlh~~~ivhrdikdenvivd-------~~g------~~klidfgsaa~~ksgpfd~f~-------gtv~~aapevl  740 (772)
T KOG1152|consen  681 AGIKHLHDQGIVHRDIKDENVIVD-------SNG------FVKLIDFGSAAYTKSGPFDVFV-------GTVDYAAPEVL  740 (772)
T ss_pred             hccccccccCceecccccccEEEe-------cCC------eEEEeeccchhhhcCCCcceee-------eeccccchhhh
Confidence            457789999999999999999999       778      8999999987654332222221       11235677777


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHh
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLL  544 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l  544 (581)
                      -.-.....+.|.|++.--+..+
T Consensus       741 ~g~~y~gk~qdiwalgillyti  762 (772)
T KOG1152|consen  741 GGEKYLGKPQDIWALGILLYTI  762 (772)
T ss_pred             CCCccCCCcchhhhhhheeeEE
Confidence            6655555677999876555443

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.06  E-value=5.9e-10  Score=114.34  Aligned_cols=150  Identities=17%  Similarity=0.206  Sum_probs=97.4

Q ss_pred             hhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       280 ~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      ++++|. +..+-+|+|.+|.|--++...+       |.++||||...-                      |+        
T Consensus        75 F~d~Yk-Lt~e~LGeGAyasVqtcv~i~t-------~~EYAVKiidKq----------------------~g--------  116 (463)
T KOG0607|consen   75 FEDMYK-LTSELLGEGAYASVQTCVSIQT-------GKEYAVKIIDKQ----------------------PG--------  116 (463)
T ss_pred             HHHHHH-hHHHHhcCccceeeeeeeeecc-------chhhhhhhhhcC----------------------Cc--------
Confidence            444443 5578899999999999998876       799999986421                      11        


Q ss_pred             HHHHHHHHHHHHHHHHHH---HHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHH
Q 008021          360 SVQQFAVFMMSQVDLARE---AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSA  435 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~E---a~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~  435 (581)
                         .-+..+.+|++.-..   ..|+-.+.+.|++..+.+             ||||-+.|++|-..+....- ......+
T Consensus       117 ---HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FY-------------LVfEKm~GGplLshI~~~~~F~E~EAs~  180 (463)
T KOG0607|consen  117 ---HSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFY-------------LVFEKMRGGPLLSHIQKRKHFNEREASR  180 (463)
T ss_pred             ---hHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEE-------------EEEecccCchHHHHHHHhhhccHHHHHH
Confidence               011223333333333   236667777777666554             99999999999877654211 1111222


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE  494 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~  494 (581)
                      +..- +...|..||..||-|||+||.|||-...+    .      -.-|+|+||-+...
T Consensus       181 vvkd-ia~aLdFlH~kgIAHRDlKPENiLC~~pn----~------vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  181 VVKD-IASALDFLHTKGIAHRDLKPENILCESPN----K------VSPVKICDFDLGSG  228 (463)
T ss_pred             HHHH-HHHHHHHHhhcCcccccCCccceeecCCC----C------cCceeeeccccccc
Confidence            3322 23458999999999999999999987211    1      11589999976543

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.05  E-value=8.4e-10  Score=120.72  Aligned_cols=194  Identities=19%  Similarity=0.149  Sum_probs=119.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||+|.||.||+|+++..  +.. ...+||||..+-.-                                    ...-
T Consensus       162 ~kkLGeGaFGeV~~G~l~~~--~~~-~~~~VAvK~~k~~~------------------------------------~~~~  202 (474)
T KOG0194|consen  162 GKKLGEGAFGEVFKGKLKLK--NGF-KVVPVAVKTTKGSS------------------------------------ELTK  202 (474)
T ss_pred             cceeecccccEEEEEEEEec--CCc-eeeeeEEEeecccc------------------------------------cccH
Confidence            48899999999999999863  200 01238999744210                                    0011


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHH-HHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA-HIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la-~~~i~a~l~~  447 (581)
                      .+..+|.+||+-+..+.     +++|..-.-+--...+-.||||+|+|++|.++++..+..-.....+. -..+..-++.
T Consensus       203 ~~~~e~m~EArvMr~l~-----H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~Y  277 (474)
T KOG0194|consen  203 EQIKEFMKEARVMRQLN-----HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEY  277 (474)
T ss_pred             HHHHHHHHHHHHHHhCC-----CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHH
Confidence            22355788988776542     33332111122345677899999999999999976443111222111 1122234788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh-HHHHHHHHHHHHhhcHH-HHHHHHHhh
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD-RVNLVEFFKAVARRDGR-TAAECTLRL  525 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~-r~~l~~l~~Al~~~D~~-~~~e~ll~l  525 (581)
                      ||..+++||||-.-|.|+.       .++      .+++.|||++..-+... ...++++-       .. .++|.+ ..
T Consensus       278 Lh~k~~IHRDIAARNcL~~-------~~~------~vKISDFGLs~~~~~~~~~~~~~klP-------irWLAPEtl-~~  336 (474)
T KOG0194|consen  278 LHSKNCIHRDIAARNCLYS-------KKG------VVKISDFGLSRAGSQYVMKKFLKKLP-------IRWLAPETL-NT  336 (474)
T ss_pred             HHHCCCcchhHhHHHheec-------CCC------eEEeCccccccCCcceeeccccccCc-------ceecChhhh-cc
Confidence            9999999999999999999       555      67999999987654221 11122111       11 123433 44


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +......|+|+|+..+.|+++.
T Consensus       337 ~~~s~kTDV~sfGV~~~Eif~~  358 (474)
T KOG0194|consen  337 GIFSFKTDVWSFGVLLWEIFEN  358 (474)
T ss_pred             CccccccchhheeeeEEeeecc
Confidence            4666677888888888877764

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.04  E-value=1.3e-09  Score=130.08  Aligned_cols=175  Identities=16%  Similarity=0.168  Sum_probs=104.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ++.||+|++|.||+|+.+.+       |+.||||....... ...                                   
T Consensus       695 ~~~ig~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~-~~~-----------------------------------  731 (968)
T PLN00113        695 ENVISRGKKGASYKGKSIKN-------GMQFVVKEINDVNS-IPS-----------------------------------  731 (968)
T ss_pred             ccEEccCCCeeEEEEEECCC-------CcEEEEEEccCCcc-ccH-----------------------------------
Confidence            56899999999999998754       69999997543210 000                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                             .|.+.+.++     +++++  ++.+.  ......++||||++|++|.+++....  ......++..++++ +.
T Consensus       732 -------~~~~~l~~l-----~HpnI--v~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~--~~~~~~i~~~ia~~-L~  794 (968)
T PLN00113        732 -------SEIADMGKL-----QHPNI--VKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLS--WERRRKIAIGIAKA-LR  794 (968)
T ss_pred             -------HHHHHHhhC-----CCCCc--ceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCC--HHHHHHHHHHHHHH-HH
Confidence                   011111111     22322  22221  12234579999999999999985422  12234455544444 77


Q ss_pred             Hhh---hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          447 MLL---VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       447 ~L~---~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                      .+|   ..+++|+|+||.||+++       .++    .+++.   +|.......+...         ...-++.++|.+.
T Consensus       795 yLH~~~~~~iiH~dlkp~Nil~~-------~~~----~~~~~---~~~~~~~~~~~~~---------~~t~~y~aPE~~~  851 (968)
T PLN00113        795 FLHCRCSPAVVVGNLSPEKIIID-------GKD----EPHLR---LSLPGLLCTDTKC---------FISSAYVAPETRE  851 (968)
T ss_pred             HhccCCCCCeecCCCCHHhEEEC-------CCC----ceEEE---eccccccccCCCc---------cccccccCccccc
Confidence            788   56999999999999998       333    11333   4443332211100         1112455666543


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . ..+....|.++|+..+.|++++
T Consensus       852 ~-~~~~~~sDv~S~Gvvl~el~tg  874 (968)
T PLN00113        852 T-KDITEKSDIYGFGLILIELLTG  874 (968)
T ss_pred             C-CCCCcccchhhHHHHHHHHHhC
Confidence            2 3445567999999999999876

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.04  E-value=1.3e-09  Score=118.48  Aligned_cols=196  Identities=12%  Similarity=0.106  Sum_probs=116.2

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +-||+|+-..||++...+        .+.+|+|-..-.     ..|                      +.+++.      
T Consensus       367 k~iG~GGSSkV~kV~~s~--------~~iyalkkv~~~-----~~D----------------------~qtl~g------  405 (677)
T KOG0596|consen  367 KQIGSGGSSKVFKVLNSD--------KQIYALKKVVLL-----EAD----------------------NQTLDG------  405 (677)
T ss_pred             HhhcCCCcceeeeeecCC--------CcchhhhHHHHh-----hcC----------------------HHHHHH------
Confidence            679999999999998754        366776621000     000                      122332      


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhcchh--hHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQGHER--LKSALAHIGTHALL  445 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~~~~--~~~~la~~~i~a~l  445 (581)
                          |++|..-+.+|..+    ..  +-+.|....  +.-++||||= -..|+.++........  ...-....++.+ .
T Consensus       406 ----y~nEI~lL~KLkg~----~~--IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~a-V  473 (677)
T KOG0596|consen  406 ----YRNEIALLNKLKGH----DK--IIQLYDYEVTDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLA-V  473 (677)
T ss_pred             ----HHHHHHHHHHhcCC----ce--EEEEeeeeccCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHH-H
Confidence                46677777666533    22  223332222  3346899974 3578888865332221  112233333333 6


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.+|.+||||.||||.|+|+-        +|      .++|||||++..+.++...-+.+-=.   -.=-|-.+|++..+
T Consensus       474 ~~IH~~gIVHSDLKPANFLlV--------kG------~LKLIDFGIA~aI~~DTTsI~kdsQv---GT~NYMsPEAl~~~  536 (677)
T KOG0596|consen  474 KTIHQHGIVHSDLKPANFLLV--------KG------RLKLIDFGIANAIQPDTTSIVKDSQV---GTVNYMSPEALTDM  536 (677)
T ss_pred             HHHHHhceeecCCCcccEEEE--------ee------eEEeeeechhcccCccccceeecccc---CcccccCHHHHhhc
Confidence            778999999999999999987        46      89999999999887664322111000   00012345555554


Q ss_pred             cCC----------CCCCCHHHHHHHHHHhhhHhhccccHHHHH
Q 008021          526 SKQ----------QNCPNPKAFIEWMRLLPSGVLRRVIWSILL  558 (581)
Q Consensus       526 ~~~----------~~~~D~~~f~~~l~~l~~~~~~~~~~~~ll  558 (581)
                      ...          .+..|+|.++|.|.+++-+   ++.+.+..
T Consensus       537 ~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYg---ktPf~~~~  576 (677)
T KOG0596|consen  537 SSSRENGKSKIKISRKSDVWSLGCILYQMVYG---KTPFGQII  576 (677)
T ss_pred             cccccCCCcceeecCccchhhhhhHHHHHHhc---CCchHHHH
Confidence            332          3456999999999998755   44444443

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.03  E-value=4.6e-10  Score=127.23  Aligned_cols=181  Identities=20%  Similarity=0.209  Sum_probs=123.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||.|.||.||+|....-.++  .+.+-||||..+-...                                      -
T Consensus       491 ~~eLGegaFGkVf~a~~~~l~p~--~~~~lVAVK~LKd~a~--------------------------------------~  530 (774)
T KOG1026|consen  491 KEELGEGAFGKVFLAEAYGLLPG--QDEQLVAVKALKDKAE--------------------------------------N  530 (774)
T ss_pred             hhhhcCchhhhhhhhhccCCCCC--ccceehhHhhhccccc--------------------------------------H
Confidence            36799999999999998542222  3357899996543311                                      1


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC---CCcEEEEeccCCccHHHHHHhhhcc--------h----hhH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV---HPAVLVETYEQGECVSRYVDELQGH--------E----RLK  433 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~---t~~VLVmEyi~G~~L~~~l~~~~~~--------~----~~~  433 (581)
                      ..+.||++||.-+..|.     +++|.  +. ...|   .+.++|.||++-++|.+++....+.        .    ...
T Consensus       531 ~~~~dF~REaeLla~l~-----H~nIV--rL-lGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~  602 (774)
T KOG1026|consen  531 QARQDFRREAELLAELQ-----HPNIV--RL-LGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLST  602 (774)
T ss_pred             HHHHHHHHHHHHHHhcc-----CCCeE--EE-EEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCH
Confidence            24578999998776653     23332  11 1223   4568999999999999998653211        1    111


Q ss_pred             H---HHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          434 S---ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       434 ~---~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      .   .+|.+++ +-+..|-.+.||||||-.-|.||.       ..-      .|||.||||++.+-              
T Consensus       603 ~q~L~iA~QIA-aGM~YLs~~~FVHRDLATRNCLVg-------e~l------~VKIsDfGLsRdiY--------------  654 (774)
T KOG1026|consen  603 SQFLHIATQIA-AGMEYLSSHHFVHRDLATRNCLVG-------ENL------VVKISDFGLSRDIY--------------  654 (774)
T ss_pred             HHHHHHHHHHH-HHHHHHHhCcccccchhhhhceec-------cce------EEEecccccchhhh--------------
Confidence            2   2333322 336667789999999999999998       544      89999999998653              


Q ss_pred             HhhcHHHHH------------HHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          511 ARRDGRTAA------------ECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       511 ~~~D~~~~~------------e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       ..|||++.            |+++ .++.....|+|+|+-.|-|+++-
T Consensus       655 -ssDYYk~~~~t~lPIRWMppEsIl-y~kFTteSDVWs~GVvLWEIFsy  701 (774)
T KOG1026|consen  655 -SSDYYKVRGNTLLPIRWMPPESIL-YGKFTTESDVWSFGVVLWEIFSY  701 (774)
T ss_pred             -hhhhhcccCCceeeeecCCHHHhh-cCcccchhhhhhhhhhhhhhhcc
Confidence             34555544            4443 36677788999999999999876

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=4.7e-10  Score=115.14  Aligned_cols=194  Identities=16%  Similarity=0.135  Sum_probs=120.8

Q ss_pred             hhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHH
Q 008021          283 IFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV  361 (581)
Q Consensus       283 iF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v  361 (581)
                      ..++|| -+.+|.|.||.|-.++-+.+       |+-+||||++.++-  |..|                          
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat-------~k~YAiKIlkKevi--iakd--------------------------  210 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKAT-------GKLYAIKILKKEVI--IAKD--------------------------  210 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeeccc-------Cceeehhhhhhhhe--eehH--------------------------
Confidence            345677 68999999999999999886       79999999776532  1111                          


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHH
Q 008021          362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQGHERLKSALAHI  439 (581)
Q Consensus       362 ~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~  439 (581)
                       +.+..       ..|.+-+...++-|     +.--+  +.+.  .+-+.||||..|+.|--.+.....-...+.+....
T Consensus       211 -EVAHT-------lTE~RVL~~~~HPF-----Lt~LK--YsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGa  275 (516)
T KOG0690|consen  211 -EVAHT-------LTENRVLQNCRHPF-----LTSLK--YSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGA  275 (516)
T ss_pred             -Hhhhh-------hhHHHHHHhccCcH-----HHHhh--hhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhH
Confidence             00000       11222222222111     00000  1111  12368999999998765543322212222333222


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc-CH-hhHHHHHHHHHHHHhhcHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL-SK-TDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L-~~-~~r~~l~~l~~Al~~~D~~~  517 (581)
                      -+-..|..||..++|.||+|-.|+|++       .+|      +|++.|||++++- +. .....||        +..+-
T Consensus       276 EIvsAL~YLHs~~ivYRDlKLENLlLD-------kDG------HIKitDFGLCKE~I~~g~t~kTFC--------GTPEY  334 (516)
T KOG0690|consen  276 EIVSALGYLHSRNIVYRDLKLENLLLD-------KDG------HIKITDFGLCKEEIKYGDTTKTFC--------GTPEY  334 (516)
T ss_pred             HHHHHhhhhhhCCeeeeechhhhheec-------cCC------ceEeeecccchhcccccceecccc--------CChhh
Confidence            223458899999999999999999999       889      9999999999852 22 2333444        44444


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|-..++-..+..+.|-|...-.|.+++.+
T Consensus       335 LAPEVleDnDYgraVDWWG~GVVMYEMmCG  364 (516)
T KOG0690|consen  335 LAPEVLEDNDYGRAVDWWGVGVVMYEMMCG  364 (516)
T ss_pred             cCchhhccccccceeehhhhhHHHHHHHhc
Confidence            444444556666788888888888888766

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.01  E-value=1.7e-10  Score=118.30  Aligned_cols=117  Identities=19%  Similarity=0.132  Sum_probs=86.1

Q ss_pred             EEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEE
Q 008021          408 VLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFL  487 (581)
Q Consensus       408 VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLi  487 (581)
                      ++|||++++ ++.+.+.........+. +.-.. -+..+.+|..||+||||||.||+|.       .++      .++++
T Consensus        97 y~v~e~m~~-nl~~vi~~elDH~tis~-i~yq~-~~~ik~lhs~~IihRdLkPsnivv~-------~~~------~lKi~  160 (369)
T KOG0665|consen   97 YLVMELMDA-NLCQVILMELDHETISY-ILYQM-LCGIKHLHSAGIIHRDLKPSNIVVN-------SDC------TLKIL  160 (369)
T ss_pred             HHHHHhhhh-HHHHHHHHhcchHHHHH-HHHHH-HHHHHHHHhcceeecccCcccceec-------chh------heeec
Confidence            589999976 45555432111222211 22111 1347889999999999999999998       666      89999


Q ss_pred             ecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          488 DVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       488 DFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |||++..-....+.      .-.+...+++++|.+++++ +.+..|.|+.+|.+.||+.+
T Consensus       161 dfg~ar~e~~~~~m------tpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~  213 (369)
T KOG0665|consen  161 DFGLARTEDTDFMM------TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILG  213 (369)
T ss_pred             cchhhcccCccccc------CchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhc
Confidence            99999876655322      2346678999999999999 66788999999999999877

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.97  E-value=2.9e-09  Score=103.79  Aligned_cols=84  Identities=18%  Similarity=0.093  Sum_probs=56.6

Q ss_pred             CceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       288 d~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      +-+|++.|..++||+.+..+        |+.++||+.+++...                                     
T Consensus         2 ~~~~l~~G~~n~~~~v~~~~--------g~~~ilK~~~~~~~~-------------------------------------   36 (223)
T cd05154           2 EVRQLSGGQSNLTYLLTAGG--------GRRLVLRRPPPGALL-------------------------------------   36 (223)
T ss_pred             cceecCCCccceEEEEEecC--------CcceEEEeCCCcccC-------------------------------------
Confidence            45799999999999998753        489999986554110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCC-----CcEEEEeccCCccHHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH-----PAVLVETYEQGECVSRY  422 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t-----~~VLVmEyi~G~~L~~~  422 (581)
                       ....++.+|++.+..+.+.     ++.+|+++.-...     ..+++|||++|.++.+.
T Consensus        37 -~~~~~~~~E~~~~~~l~~~-----~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~   90 (223)
T cd05154          37 -PSAHDVAREYRVLRALAGT-----GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDR   90 (223)
T ss_pred             -cccccHHHHHHHHHHhhCC-----CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCC
Confidence             0012345677766665432     4567777644333     34899999999988653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.96  E-value=2.3e-08  Score=102.93  Aligned_cols=124  Identities=12%  Similarity=0.130  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHHhcccCCCccccccc--ccC-----CCCcEEEEeccCCc-cHHHHHHhh---hcchhhHHHHHHHHHH
Q 008021          374 LAREAAHLSRFIYNFRRWKDVSFPKPV--YPL-----VHPAVLVETYEQGE-CVSRYVDEL---QGHERLKSALAHIGTH  442 (581)
Q Consensus       374 f~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l-----~t~~VLVmEyi~G~-~L~~~l~~~---~~~~~~~~~la~~~i~  442 (581)
                      +.+|.+++.++.+.     ++.+|.++  .+.     ....+||||+++|. +|.+++...   .........+...+. 
T Consensus        75 a~rE~~~l~~L~~~-----GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la-  148 (268)
T PRK15123         75 ADREWRAIHRLHEV-----GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVA-  148 (268)
T ss_pred             HHHHHHHHHHHHHc-----CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHH-
Confidence            56788899888754     67788873  221     23478999999997 899887531   111122334544443 


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc---cCHh-hHHHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE---LSKT-DRVNLVEFFKA  509 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~---L~~~-~r~~l~~l~~A  509 (581)
                      .++..+|..|++|+|++|+|||++......  +    +..++.||||+.+..   ++.. ...++..+..+
T Consensus       149 ~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~--~----~~~~~~LIDl~r~~~~~~~~~~~r~~dL~~L~~s  213 (268)
T PRK15123        149 TMVRDMHAAGINHRDCYICHFLLHLPFPGR--E----EDLKLSVIDLHRAQIRARVPRRWRDKDLAGLYFS  213 (268)
T ss_pred             HHHHHHHHCcCccCCCChhhEEEeccccCC--C----CCceEEEEECCcccccCCCChHHHHHHHHHHHHH
Confidence            447889999999999999999998210000  1    123899999998843   2222 23455555444

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.95  E-value=1.3e-09  Score=111.16  Aligned_cols=187  Identities=17%  Similarity=0.110  Sum_probs=115.2

Q ss_pred             CCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       287 fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      +..+.||.|=-|.|-.+..+.|       |+..|+||++-.-+                                     
T Consensus        65 is~qvLG~GinGkV~~C~~k~T-------~ekfALKvL~Ds~K-------------------------------------  100 (400)
T KOG0604|consen   65 ISWQVLGAGINGKVVQCVHKRT-------QEKFALKVLLDSPK-------------------------------------  100 (400)
T ss_pred             ehhhhhccccCCceEEEEeccc-------hhhhHHHHHhcCHH-------------------------------------
Confidence            4468899999999999999987       79999998653211                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCC-cccccccccC-CCCc--EEEEeccCCccHHHHHHhhhcchhhH---HHHHHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPL-VHPA--VLVETYEQGECVSRYVDELQGHERLK---SALAHI  439 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~-V~vP~~~~~l-~t~~--VLVmEyi~G~~L~~~l~~~~~~~~~~---~~la~~  439 (581)
                       ..+|+++.--+.          .+++ |.+-.+|... ...+  .+|||+++|+.|-.-+++.....-..   .++.+.
T Consensus       101 -ARrEVeLHw~~s----------~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~q  169 (400)
T KOG0604|consen  101 -ARREVELHWMAS----------GHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQ  169 (400)
T ss_pred             -HHhHhhhhhhhc----------CCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHH
Confidence             122333222211          1111 2233333221 1222  46999999999888776533221112   233333


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh-hHHHHHHHHHHHHhhcHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT-DRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~-~r~~l~~l~~Al~~~D~~~~  518 (581)
                      +. ..+..||..+|-|||+||.|+|.....    .      ..-++|.|||++++-... ....       -...-+|-+
T Consensus       170 I~-~Av~~lH~~nIAHRDlKpENLLyt~t~----~------na~lKLtDfGFAK~t~~~~~L~T-------Pc~TPyYva  231 (400)
T KOG0604|consen  170 IG-LAVRYLHSMNIAHRDLKPENLLYTTTS----P------NAPLKLTDFGFAKETQEPGDLMT-------PCFTPYYVA  231 (400)
T ss_pred             HH-HHHHHHHhcchhhccCChhheeeecCC----C------CcceEecccccccccCCCccccC-------CcccccccC
Confidence            32 347889999999999999999998222    1      237999999999875421 1111       012234444


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .|. +..-.++...|.|.+.-.|.-|+.+
T Consensus       232 Pev-lg~eKydkscdmwSlgVimYIlLCG  259 (400)
T KOG0604|consen  232 PEV-LGPEKYDKSCDMWSLGVIMYILLCG  259 (400)
T ss_pred             HHH-hCchhcCCCCCccchhHHHHHhhcC
Confidence            444 4445566677999999888887766

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.94  E-value=1.3e-09  Score=119.55  Aligned_cols=87  Identities=23%  Similarity=0.278  Sum_probs=63.5

Q ss_pred             CCCcEEEEeccCCccHHHHHHhhhcchh--hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCC
Q 008021          404 VHPAVLVETYEQGECVSRYVDELQGHER--LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK  481 (581)
Q Consensus       404 ~t~~VLVmEyi~G~~L~~~l~~~~~~~~--~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~  481 (581)
                      .++-++..|||.|+-++.++-+......  .-..++...+++ |..||..++||||||.||||++       -+|     
T Consensus       101 enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldA-Ln~LHs~~iIHRDLKAGNiL~T-------ldG-----  167 (1187)
T KOG0579|consen  101 ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDA-LNWLHSQNIIHRDLKAGNILLT-------LDG-----  167 (1187)
T ss_pred             cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHH-HHHHhhcchhhhhccccceEEE-------ecC-----
Confidence            4555689999999999988755432211  112344444444 8889999999999999999999       788     


Q ss_pred             CeEEEEecccccccCHh--hHHHHH
Q 008021          482 PHVIFLDVGMTAELSKT--DRVNLV  504 (581)
Q Consensus       482 ~~lvLiDFGl~~~L~~~--~r~~l~  504 (581)
                       +|.|.|||.+.....+  .|..|+
T Consensus       168 -dirLADFGVSAKn~~t~qkRDsFI  191 (1187)
T KOG0579|consen  168 -DIRLADFGVSAKNKSTRQKRDSFI  191 (1187)
T ss_pred             -cEeeecccccccchhHHhhhcccc
Confidence             9999999998876543  344554

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.90  E-value=5.7e-10  Score=125.91  Aligned_cols=186  Identities=16%  Similarity=0.183  Sum_probs=121.7

Q ss_pred             CceeecccceeE-EEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          288 EEAPVASGSIAQ-VHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       288 d~~PIgsGSigQ-VyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      .++-+|.||-|. ||+|...         |++||||-                                    ++.++.+
T Consensus       513 ~~eilG~Gs~Gt~Vf~G~ye---------~R~VAVKr------------------------------------ll~e~~~  547 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRGVYE---------GREVAVKR------------------------------------LLEEFFD  547 (903)
T ss_pred             cHHHcccCCCCcEEEEEeeC---------CceehHHH------------------------------------HhhHhHH
Confidence            466788888875 7999984         59999992                                    3445555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCC-----cEEEEeccCCccHHHHHHhhhcchhh------HHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP-----AVLVETYEQGECVSRYVDELQGHERL------KSA  435 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~-----~VLVmEyi~G~~L~~~l~~~~~~~~~------~~~  435 (581)
                      ...+|++..+|..+          +     |.++.-+|++     .+++.|.|. .+|.++++.. .....      ...
T Consensus       548 ~A~rEi~lL~eSD~----------H-----~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~-~~d~~~~~~i~~~~  610 (903)
T KOG1027|consen  548 FAQREIQLLQESDE----------H-----PNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESS-GLDVEMQSDIDPIS  610 (903)
T ss_pred             HHHHHHHHHHhccC----------C-----CceEEEEeeccCCceEEEEehHhh-hhHHHHHhcc-ccchhhcccccHHH
Confidence            66777777777532          2     2333334443     378999885 5899988652 11111      112


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      +...++. -+..||.-+++||||||.||||.....    +|    +-+++|.|||+++.++.. +..|.. .....-.++
T Consensus       611 ~l~q~~~-GlaHLHsl~iVHRDLkPQNILI~~~~~----~~----~~ra~iSDfglsKkl~~~-~sS~~r-~s~~sGt~G  679 (903)
T KOG1027|consen  611 VLSQIAS-GLAHLHSLKIVHRDLKPQNILISVPSA----DG----TLRAKISDFGLSKKLAGG-KSSFSR-LSGGSGTSG  679 (903)
T ss_pred             HHHHHHH-HHHHHHhcccccccCCCceEEEEccCC----Cc----ceeEEecccccccccCCC-cchhhc-ccCCCCccc
Confidence            2223333 378899999999999999999984221    12    238999999999999754 334443 222334456


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      =.|+|.+.+ .....++|...++|.+..++++
T Consensus       680 W~APE~L~~-~~~~~avDiFslGCvfyYvltg  710 (903)
T KOG1027|consen  680 WQAPEQLRE-DRKTQAVDIFSLGCVFYYVLTG  710 (903)
T ss_pred             ccCHHHHhc-cccCcccchhhcCceEEEEecC
Confidence            667777655 5555688999988888777665

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.90  E-value=2.9e-09  Score=113.49  Aligned_cols=189  Identities=16%  Similarity=0.127  Sum_probs=126.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||.|+||.||-+..+.|       |+-+|.|-..          -+-++.                          =
T Consensus       190 ~RvlGkGGFGEV~acqvraT-------GKMYAcKkL~----------KKRiKk--------------------------r  226 (591)
T KOG0986|consen  190 YRVLGKGGFGEVCACQVRAT-------GKMYACKKLD----------KKRIKK--------------------------R  226 (591)
T ss_pred             eEEEecccccceeEEEEecc-------hhhHHHHHHH----------HHHHHH--------------------------h
Confidence            47899999999999999887       6888877321          111110                          0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCC--CcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH--PAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t--~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                      ..|---.+|...+++...-|      .|--.| .+.|  .-+|||+.++|+.|.=.+-+....  ...+......-+..-
T Consensus       227 ~ge~maLnEk~iL~kV~s~F------iVslaY-AfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cG  299 (591)
T KOG0986|consen  227 KGETMALNEKQILEKVSSPF------IVSLAY-AFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICG  299 (591)
T ss_pred             hhhHHhhHHHHHHHHhccCc------EEEEee-eecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhh
Confidence            01111245666666553322      222222 2333  348999999999987554333211  111222222223345


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      |+.||..++|.||+||.|||++       +.|      ++.|.|.|++.++++.....      .-+-.-+|-|+|++-.
T Consensus       300 LehlH~~~iVYRDLKPeNILLD-------d~G------hvRISDLGLAvei~~g~~~~------~rvGT~GYMAPEvl~n  360 (591)
T KOG0986|consen  300 LEHLHRRRIVYRDLKPENILLD-------DHG------HVRISDLGLAVEIPEGKPIR------GRVGTVGYMAPEVLQN  360 (591)
T ss_pred             HHHHHhcceeeccCChhheeec-------cCC------CeEeeccceEEecCCCCccc------cccCcccccCHHHHcC
Confidence            8999999999999999999999       788      99999999999998876543      1133457777777754


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       ..+.-.+|-+++.+.|.+++.+
T Consensus       361 -e~Y~~s~Dwf~lGCllYemi~G  382 (591)
T KOG0986|consen  361 -EVYDFSPDWFSLGCLLYEMIAG  382 (591)
T ss_pred             -CcccCCccHHHHHhHHHHHHcc
Confidence             5588899999999999999977

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.89  E-value=1.1e-08  Score=102.09  Aligned_cols=131  Identities=15%  Similarity=0.146  Sum_probs=85.9

Q ss_pred             CCCcEEEEeccCCccHHHHHHhhhcch--hhHHHHHHH--HHHHHHHHhhhCC--eEecCCCCCCEEEeecccccccccc
Q 008021          404 VHPAVLVETYEQGECVSRYVDELQGHE--RLKSALAHI--GTHALLKMLLVDN--FIHADMHPGNILVRVAQKKSSQKRL  477 (581)
Q Consensus       404 ~t~~VLVmEyi~G~~L~~~l~~~~~~~--~~~~~la~~--~i~a~l~~L~~~G--~~H~DlHPGNILV~~~~~~~~~~g~  477 (581)
                      +...+|+..|-.-++|.+.++.....+  ....++...  ++...+++||...  +.|+|+||+||++.       +++ 
T Consensus        95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls-------~~~-  166 (302)
T KOG2345|consen   95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS-------DSG-  166 (302)
T ss_pred             ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec-------CCC-
Confidence            344578999888888888876543221  222333332  3334589999988  99999999999998       556 


Q ss_pred             cCCCCeEEEEecccccccCHh--hHHHHHH--HHHHHHhhcHHHHHHHHH-h-hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          478 FRSKPHVIFLDVGMTAELSKT--DRVNLVE--FFKAVARRDGRTAAECTL-R-LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       478 ~~~~~~lvLiDFGl~~~L~~~--~r~~l~~--l~~Al~~~D~~~~~e~ll-~-l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                           .+++.|||.++..+-+  .+..-.+  =|.+=-..=.++++|++- + .+...+..|.|++++.+..+..+
T Consensus       167 -----~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~  237 (302)
T KOG2345|consen  167 -----LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFG  237 (302)
T ss_pred             -----ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHc
Confidence                 8999999999875432  2222221  122222333567777762 2 23444678999999999998644

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.87  E-value=5.3e-09  Score=110.98  Aligned_cols=200  Identities=18%  Similarity=0.151  Sum_probs=110.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      .-+|.|+|..||+|.+...       .+.|||||-+-+-                        .|-  ++--+.+-+...
T Consensus       469 hLLGrGGFSEVyKAFDl~E-------qRYvAvKIHqlNK------------------------~Wr--dEKKeNYhKHAc  515 (775)
T KOG1151|consen  469 HLLGRGGFSEVYKAFDLTE-------QRYVAVKIHQLNK------------------------NWR--DEKKENYHKHAC  515 (775)
T ss_pred             HHhccccHHHHHHhcccch-------hheeeEeeehhcc------------------------chh--hHhhhhHHHHHH
Confidence            3489999999999988653       6899999865431                        011  122222333334


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCC---CCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV---HPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALL  445 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~---t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l  445 (581)
                      +|-+...|..             +..+.+.|.-++   ..-+-|.|||+|-.|+=|++..... ......|.-.++.+ |
T Consensus       516 REyrIHKeLD-------------HpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnA-L  581 (775)
T KOG1151|consen  516 REYRIHKELD-------------HPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNA-L  581 (775)
T ss_pred             HHHhhhhccC-------------cceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHH-H
Confidence            4433333322             222333333322   3347899999999999888653221 11112222222332 4


Q ss_pred             HHhh--hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH--HHHHHHhhcHHHHHHH
Q 008021          446 KMLL--VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE--FFKAVARRDGRTAAEC  521 (581)
Q Consensus       446 ~~L~--~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~--l~~Al~~~D~~~~~e~  521 (581)
                      ..|-  .--|||-||||||||+-   .+. ..|      .|++.|||+++.++++.-.....  |-.-.+-.=||.-+|+
T Consensus       582 ~YLNEikpPIIHYDLKPgNILLv---~Gt-acG------eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEc  651 (775)
T KOG1151|consen  582 KYLNEIKPPIIHYDLKPGNILLV---NGT-ACG------EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPEC  651 (775)
T ss_pred             HHHhccCCCeeeeccCCccEEEe---cCc-ccc------eeEeeecchhhhccCCccCcccceeeecccCceeeecCcce
Confidence            4443  36799999999999987   111 345      89999999999887765432211  1111111113344444


Q ss_pred             HHhhcCCC---CCCCHHHHHHHHHHhhh
Q 008021          522 TLRLSKQQ---NCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       522 ll~l~~~~---~~~D~~~f~~~l~~l~~  546 (581)
                      ++--..++   ..+|+|...-.....+-
T Consensus       652 FvVgkePPKIsnKVDVWSvGVIFyQClY  679 (775)
T KOG1151|consen  652 FVVGKEPPKISNKVDVWSVGVIFYQCLY  679 (775)
T ss_pred             eecCCCCCccccceeeEeeehhhhhhhc
Confidence            43211111   24577776666555543

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.87  E-value=2.8e-09  Score=109.74  Aligned_cols=199  Identities=17%  Similarity=0.127  Sum_probs=116.5

Q ss_pred             hhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          281 SEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       281 ~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      .--..+|+ -+.||.||+|.|-.+++++|       .+.+|+||.+.++-   ..              -..+.|+..+.
T Consensus       246 ~l~l~df~ll~vigrgsyakvl~~~~~~t-------~qiyamkvvkkel~---nd--------------dedidwvqtek  301 (593)
T KOG0695|consen  246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKT-------DQIYAMKVVKKELV---ND--------------DEDIDWVQTEK  301 (593)
T ss_pred             ccccccceeeeeecCcchhhhhheehccc-------ceeeehhhHHHHhc---CC--------------cccchhHHhhH
Confidence            33455677 68999999999999999987       79999998654311   00              11122332211


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHH
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI  439 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~  439 (581)
                      .+-              |+         -.+++.+.--.....-.++-..|.||++|+.|.=.++..........+....
T Consensus       302 ~vf--------------e~---------asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~  358 (593)
T KOG0695|consen  302 HVF--------------EQ---------ASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA  358 (593)
T ss_pred             HHH--------------Hh---------ccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhH
Confidence            110              11         0112211111111112245578999999999875554432222222333333


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc-cCH-hhHHHHHHHHHHHHhhcHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE-LSK-TDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~-L~~-~~r~~l~~l~~Al~~~D~~~  517 (581)
                      -+...+..||+.|++.||+|-.|+|++       ..|      +|+|.|+||+++ +.+ +....||        +...-
T Consensus       359 ei~lal~flh~rgiiyrdlkldnvlld-------aeg------hikltdygmcke~l~~gd~tstfc--------gtpny  417 (593)
T KOG0695|consen  359 EICLALNFLHERGIIYRDLKLDNVLLD-------AEG------HIKLTDYGMCKEGLGPGDTTSTFC--------GTPNY  417 (593)
T ss_pred             HHHHHHHHHhhcCeeeeeccccceEEc-------cCC------ceeecccchhhcCCCCCccccccc--------CCCcc
Confidence            334458899999999999999999999       778      999999999985 222 2333444        22222


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|-.+++--.+.-..|-|++.--|-++..+
T Consensus       418 iapeilrgeeygfsvdwwalgvlmfemmag  447 (593)
T KOG0695|consen  418 IAPEILRGEEYGFSVDWWALGVLMFEMMAG  447 (593)
T ss_pred             cchhhhcccccCceehHHHHHHHHHHHHcC
Confidence            333333333344456666666666666544

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.83  E-value=4.1e-08  Score=110.90  Aligned_cols=122  Identities=20%  Similarity=0.197  Sum_probs=83.1

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHH--HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH--ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~--a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      -.||.+|++++.|.++++....... .+.+.....+  ..++.|++++++||||-.-|+||.       .-.      .+
T Consensus       772 ~qlvtq~mP~G~LlDyvr~hr~~ig-sq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVk-------sP~------hv  837 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREHRDNIG-SQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVK-------SPN------HV  837 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHhhcccc-HHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeec-------CCC------eE
Confidence            3489999999999999976433221 1233333322  237788999999999999999998       333      89


Q ss_pred             EEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ++.|||++.-+.++..+.-..-    ..--...++-..+....+....|+|+|.-.+.|+++
T Consensus       838 kitdfgla~ll~~d~~ey~~~~----gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmT  895 (1177)
T KOG1025|consen  838 KITDFGLAKLLAPDEKEYSAPG----GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMT  895 (1177)
T ss_pred             EEEecchhhccCcccccccccc----cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHh
Confidence            9999999998887765543211    111122233333344556667899999999999864

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.83  E-value=1.8e-09  Score=116.25  Aligned_cols=147  Identities=15%  Similarity=0.181  Sum_probs=104.6

Q ss_pred             HHHHHHHHHHHHH--HHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          367 FMMSQVDLAREAA--HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       367 ~l~~ElDf~~Ea~--nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                      .+..|-+...|++  -+.++.+-|++.+.|+             +.||-|=|+.|-..+.....-.....+....++-..
T Consensus       466 Hv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY-------------mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EA  532 (732)
T KOG0614|consen  466 HVFSERNIMMECRSDFIVRLYRTFRDSKYVY-------------MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEA  532 (732)
T ss_pred             HHHhHHHHHHhcCchHHHHHHHHhccchhhh-------------hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHH
Confidence            4445555555554  5778888888888776             789999999998887653222222233333344444


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhH-HHHHHHHHHHHhhcHHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR-VNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r-~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                      +..||.+|||.|||||.|+|++       .+|      -++|.|||+++.+....+ ..||.       .-.|-++|.++
T Consensus       533 feYLH~k~iIYRDLKPENllLd-------~~G------y~KLVDFGFAKki~~g~KTwTFcG-------TpEYVAPEIIL  592 (732)
T KOG0614|consen  533 FEYLHRKGIIYRDLKPENLLLD-------NRG------YLKLVDFGFAKKIGSGRKTWTFCG-------TPEYVAPEIIL  592 (732)
T ss_pred             HHHHHhcCceeccCChhheeec-------cCC------ceEEeehhhHHHhccCCceeeecC-------Ccccccchhhh
Confidence            8899999999999999999999       788      899999999998866543 34441       22345667777


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .-|.. ...|.|++.--|.||+.+
T Consensus       593 nKGHD-~avDyWaLGIli~ELL~G  615 (732)
T KOG0614|consen  593 NKGHD-RAVDYWALGILIYELLTG  615 (732)
T ss_pred             ccCcc-hhhHHHHHHHHHHHHHcC
Confidence            65544 477889888888888766

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.78  E-value=2.6e-09  Score=106.39  Aligned_cols=125  Identities=18%  Similarity=0.138  Sum_probs=74.9

Q ss_pred             CCcEEEEeccCCccHHHHH-HhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          405 HPAVLVETYEQGECVSRYV-DELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l-~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      +-++||.|+++|..|-.-+ +..--.........++++++ +...|.+||+|||+||.|+++.-.     .+|     .-
T Consensus        83 ~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLea-l~yCH~n~IvHRDvkP~nllLASK-----~~~-----A~  151 (355)
T KOG0033|consen   83 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEA-LAYCHSNGIVHRDLKPENLLLASK-----AKG-----AA  151 (355)
T ss_pred             ceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCceeccCChhheeeeec-----cCC-----Cc
Confidence            3457999999998876432 21000001111122333333 666788999999999999999721     122     26


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|.|||++.++++..      .|...+-.-++-++|.+ +-.++..+.|.|+=.-.+.-|+.+
T Consensus       152 vKL~~FGvAi~l~~g~------~~~G~~GtP~fmaPEvv-rkdpy~kpvDiW~cGViLfiLL~G  208 (355)
T KOG0033|consen  152 VKLADFGLAIEVNDGE------AWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYILLVG  208 (355)
T ss_pred             eeecccceEEEeCCcc------ccccccCCCcccCHHHh-hcCCCCCcchhhhhhHHHHHHHhC
Confidence            9999999999998322      12222333344444444 445566667887766666655544

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.77  E-value=4.1e-08  Score=104.72  Aligned_cols=145  Identities=25%  Similarity=0.264  Sum_probs=92.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-||.|-||.|+||..+         |+.|||||..---++.                      |.+=.|+.+      
T Consensus       216 ~e~IGkGRyGEVwrG~wr---------Ge~VAVKiF~srdE~S----------------------WfrEtEIYq------  258 (513)
T KOG2052|consen  216 QEIIGKGRFGEVWRGRWR---------GEDVAVKIFSSRDERS----------------------WFRETEIYQ------  258 (513)
T ss_pred             EEEecCccccceeecccc---------CCceEEEEecccchhh----------------------hhhHHHHHH------
Confidence            578999999999999997         6999999965433322                      222112111      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                        =+=+++|  |+-.|...  +.++       ....|+-+||.+|-|-++|.||+....-....--.++...+ .-|..|
T Consensus       259 --TvmLRHE--NILgFIaa--D~~~-------~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~A-sGLaHL  324 (513)
T KOG2052|consen  259 --TVMLRHE--NILGFIAA--DNKD-------NGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIA-SGLAHL  324 (513)
T ss_pred             --HHHhccc--hhhhhhhc--cccC-------CCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHh-hhHHHH
Confidence              1112333  66665432  1110       12356678999999999999999653222111122332222 225555


Q ss_pred             h--------hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          449 L--------VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       449 ~--------~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      |        +-.+-|||+|.-||||.       .+|      .-.|.|+|++...+.
T Consensus       325 H~eI~GTqgKPaIAHRDlKSKNILVK-------kn~------~C~IADLGLAv~h~~  368 (513)
T KOG2052|consen  325 HMEIVGTQGKPAIAHRDLKSKNILVK-------KNG------TCCIADLGLAVRHDS  368 (513)
T ss_pred             HHHHhcCCCCchhhccccccccEEEc-------cCC------cEEEeeceeeEEecc
Confidence            5        35799999999999999       777      899999999876543

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.76  E-value=3e-08  Score=100.13  Aligned_cols=120  Identities=18%  Similarity=0.139  Sum_probs=78.4

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEE
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIF  486 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvL  486 (581)
                      -|.||||++-++|..-+...+........+++.+..+ +..+|..++||||||..||||-..     +..      +|+|
T Consensus        97 YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SA-i~fMHsknlVHRdlK~eNiLif~~-----df~------rvKl  164 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSA-IEFMHSKNLVHRDLKAENILIFDA-----DFY------RVKL  164 (378)
T ss_pred             EEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHH-HHHhhccchhhcccccceEEEecC-----Ccc------EEEe
Confidence            3789999999998876654332333345566665544 888999999999999999999621     222      8999


Q ss_pred             EecccccccCHhh-HHHHHHHHHHHHhhcHHHHHHHHHhhc----CCCCCCCHHHHHHHHHHhhhH
Q 008021          487 LDVGMTAELSKTD-RVNLVEFFKAVARRDGRTAAECTLRLS----KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       487 iDFGl~~~L~~~~-r~~l~~l~~Al~~~D~~~~~e~ll~l~----~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|||.....+... +.+.         -..+-+++.....-    ...+..|.|+|+-.+...+++
T Consensus       165 cDFG~t~k~g~tV~~~~~---------~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG  221 (378)
T KOG1345|consen  165 CDFGLTRKVGTTVKYLEY---------VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTG  221 (378)
T ss_pred             eecccccccCceehhhhh---------hcccCCcHHHhhccccceEecccccchheeeeeeeeecC
Confidence            9999988765432 2221         12233444443331    122456888888777766655

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.74  E-value=3.1e-09  Score=117.54  Aligned_cols=148  Identities=23%  Similarity=0.321  Sum_probs=93.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -.-||||++|.||||+++.+       |+.+|||+.+-+..+    |++.+.                            
T Consensus        20 lqrvgsgTygdvyKaRd~~s-------~elaavkvVkLep~d----d~~~iq----------------------------   60 (829)
T KOG0576|consen   20 LQRVGSGTYGDVYKARDKRS-------GELAAVKVVKLEPGD----DFSGIQ----------------------------   60 (829)
T ss_pred             eeeecCCcccchhhhccccc-------CchhhheeeeccCCc----cccccc----------------------------
Confidence            45799999999999999876       799999997533211    111111                            


Q ss_pred             HHHHHHHHHHH--HHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH--
Q 008021          369 MSQVDLAREAA--HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL--  444 (581)
Q Consensus       369 ~~ElDf~~Ea~--nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~--  444 (581)
                       +|+-..+|.+  |+..+...+-             .-.+-.++||||.|+++.+.-.. .+. ....+++...-+.+  
T Consensus        61 -qei~~~~dc~h~nivay~gsyl-------------r~dklwicMEycgggslQdiy~~-Tgp-lselqiayvcRetl~g  124 (829)
T KOG0576|consen   61 -QEIGMLRDCRHPNIVAYFGSYL-------------RRDKLWICMEYCGGGSLQDIYHV-TGP-LSELQIAYVCRETLQG  124 (829)
T ss_pred             -cceeeeecCCCcChHHHHhhhh-------------hhcCcEEEEEecCCCcccceeee-ccc-chhHHHHHHHhhhhcc
Confidence             1111112221  2221111110             01233689999999999885321 111 12234554443333  


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh--hHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT--DRVNLV  504 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~--~r~~l~  504 (581)
                      ++.+|..|-+|||+|-+||+++       +.|      .+++.|||..+.++..  .|..|+
T Consensus       125 l~ylhs~gk~hRdiKGanillt-------d~g------DvklaDfgvsaqitati~Krksfi  173 (829)
T KOG0576|consen  125 LKYLHSQGKIHRDIKGANILLT-------DEG------DVKLADFGVSAQITATIAKRKSFI  173 (829)
T ss_pred             chhhhcCCcccccccccceeec-------ccC------ceeecccCchhhhhhhhhhhhccc
Confidence            7889999999999999999999       777      9999999999988764  344443

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.73  E-value=5.9e-08  Score=95.74  Aligned_cols=107  Identities=19%  Similarity=0.203  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHHHhcccCCCcccccccccCC------CCcEEEEeccCCc-cHHHHHHhhh-cchhhHHHHHHHHHHHHH
Q 008021          374 LAREAAHLSRFIYNFRRWKDVSFPKPVYPLV------HPAVLVETYEQGE-CVSRYVDELQ-GHERLKSALAHIGTHALL  445 (581)
Q Consensus       374 f~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~------t~~VLVmEyi~G~-~L~~~l~~~~-~~~~~~~~la~~~i~a~l  445 (581)
                      ..+|.+|+.++.+.     +|.+|+|+.-..      .+.+|+||+++|. +|.+++.... ........+...+. .++
T Consensus        58 a~~E~~~~~~L~~~-----Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~-~~i  131 (206)
T PF06293_consen   58 AKREWRNLQRLREA-----GIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALA-RLI  131 (206)
T ss_pred             HHHHHHHHHHHHHc-----CCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHH-HHH
Confidence            45688888888753     788888874322      2348999999995 8999876411 11223344555544 348


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      ..||..|++|+|++|+|||+..       ++   +.+++.||||+-+..-.
T Consensus       132 ~~lH~~gi~H~Dl~~~NILv~~-------~~---~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  132 AKLHDAGIYHGDLNPSNILVDP-------DD---GQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHHHCcCCCCCCCcccEEEeC-------CC---CceeEEEEcchhceeCC
Confidence            8899999999999999999992       21   23489999999877554

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=98.71  E-value=3.7e-07  Score=96.32  Aligned_cols=207  Identities=17%  Similarity=0.192  Sum_probs=124.2

Q ss_pred             HHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhc
Q 008021          268 TKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS  347 (581)
Q Consensus       268 ~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~  347 (581)
                      ++.+|.+-+.+.   ++.+++ -.|..|--|-||.|+-.+        |..+||||.+..|----.+|-.    +..-..
T Consensus       132 TrmvLfrll~RG---~i~~in-GCiSTGKEANVYHat~~d--------G~~~AIKIYKTSILvFKDRdRY----V~GEfR  195 (520)
T KOG2270|consen  132 TRMVLFRLLNRG---VIVEIN-GCISTGKEANVYHATEED--------GSEFAIKIYKTSILVFKDRDRY----VSGEFR  195 (520)
T ss_pred             HHHHHHHHHhcC---eeeecc-cccccCccceeEeeecCC--------CceEEEEEEeeeEEEEechhhh----ccceee
Confidence            344444444332   244444 467889999999999865        6889999988765433333311    111001


Q ss_pred             ccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHH-HHHhh
Q 008021          348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR-YVDEL  426 (581)
Q Consensus       348 ~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~-~l~~~  426 (581)
                      +--+...-++..+|..++         ..|.+|+.|+..     .++.+|+|+  +-..+||||+|+.+..... .+++.
T Consensus       196 FRhgyck~NPRKMVk~WA---------EKE~RNLkRl~~-----aGIP~PePI--lLk~hVLVM~FlGrdgw~aPkLKd~  259 (520)
T KOG2270|consen  196 FRHGYCKHNPRKMVKTWA---------EKEMRNLKRLNN-----AGIPCPEPI--LLKNHVLVMEFLGRDGWAAPKLKDA  259 (520)
T ss_pred             eecccccCCcHHHHHHHH---------HHHHHHHHHHHh-----cCCCCCCce--eeecceEeeeeccCCCCcCcccccc
Confidence            111122234556666554         468899998864     367788887  7788999999995422110 01111


Q ss_pred             hcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHH
Q 008021          427 QGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF  506 (581)
Q Consensus       427 ~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l  506 (581)
                      .-.......+...++...-.+....++||+||.--|+|+-        +|      ++.+||.+.+.+.+...-..|+  
T Consensus       260 ~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh--------dG------~lyiIDVSQSVE~DHP~aldFL--  323 (520)
T KOG2270|consen  260 SLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH--------DG------KLYIIDVSQSVEHDHPHALDFL--  323 (520)
T ss_pred             cCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE--------CC------EEEEEEccccccCCChhHHHHH--
Confidence            1111112234444444333344568999999999999997        56      8999999999998877666654  


Q ss_pred             HHHHHhhcHHHHHHHHHhhcC
Q 008021          507 FKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       507 ~~Al~~~D~~~~~e~ll~l~~  527 (581)
                           +.|...+-.-+.++|.
T Consensus       324 -----RmDc~NVn~FF~r~gv  339 (520)
T KOG2270|consen  324 -----RMDCNNVNDFFRRLGV  339 (520)
T ss_pred             -----HHHHHHHHHHHHHcCC
Confidence                 3444444444444443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.61  E-value=3.5e-07  Score=90.31  Aligned_cols=194  Identities=20%  Similarity=0.181  Sum_probs=111.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.+|.|++|+||+|...          ..+++|+..+......                                    
T Consensus         5 ~~~l~~g~~~~v~~~~~~----------~~~~~k~~~~~~~~~~------------------------------------   38 (384)
T COG0515           5 LRKLGEGSFGEVYLARDR----------KLVALKVLAKKLESKS------------------------------------   38 (384)
T ss_pred             EEeecCCCCeEEEEEEec----------cEEEEEeechhhccch------------------------------------
Confidence            457889999999999984          5899998776533221                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCC--cEEEEeccCCccHHHHHHhhh----cchhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP--AVLVETYEQGECVSRYVDELQ----GHERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~--~VLVmEyi~G~~L~~~l~~~~----~~~~~~~~la~~~i~  442 (581)
                      .....+.+|..-+..+    ...+  .+.+.+......  ..++++|+.|..+.++.....    ........+...+..
T Consensus        39 ~~~~~~~~e~~~~~~~----~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (384)
T COG0515          39 KEVERFLREIQILASL----NHPP--NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILS  112 (384)
T ss_pred             hHHHHHHHHHHHHHHc----cCCc--ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHH
Confidence            0111223333322222    1111  111122111222  479999999999997765421    111122223333333


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHH-HHHHHHHhhcHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV-EFFKAVARRDGRTAAEC  521 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~-~l~~Al~~~D~~~~~e~  521 (581)
                      . +..+|..|++|+|+||.||+++       ..+     ..++++|||++..+......... ...........+.+.+.
T Consensus       113 ~-l~~~H~~~~~hrd~kp~nil~~-------~~~-----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~  179 (384)
T COG0515         113 A-LEYLHSKGIIHRDIKPENILLD-------RDG-----RVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV  179 (384)
T ss_pred             H-HHHHHhCCeeccCCCHHHeeec-------CCC-----CeEEEeccCcceecCCCCccccccccccccccccccCCHHH
Confidence            3 6689999999999999999998       332     15999999998855443321110 11222334455566666


Q ss_pred             HHhh--cCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRL--SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l--~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +...  .......|.+.+...+.++..+
T Consensus       180 ~~~~~~~~~~~~~D~~s~g~~~~~~~~~  207 (384)
T COG0515         180 LLGLSLAYASSSSDIWSLGITLYELLTG  207 (384)
T ss_pred             hcCCCCCCCCchHhHHHHHHHHHHHHhC
Confidence            6553  4555567887777555554444

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=98.54  E-value=1.6e-07  Score=103.36  Aligned_cols=142  Identities=19%  Similarity=0.259  Sum_probs=91.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ...+|-|-+|.||.|.+++-       .-.||||.++.+.                          +.    +++     
T Consensus       272 khKLGGGQYGeVYeGvWKky-------slTvAVKtLKEDt--------------------------Me----veE-----  309 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKKY-------SLTVAVKTLKEDT--------------------------ME----VEE-----  309 (1157)
T ss_pred             eeccCCCcccceeeeeeecc-------ceeeehhhhhhcc--------------------------hh----HHH-----
Confidence            56799999999999999873       4789999765441                          00    122     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC---CCcEEEEeccCCccHHHHHHhhhcchhh---HHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV---HPAVLVETYEQGECVSRYVDELQGHERL---KSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~---t~~VLVmEyi~G~~L~~~l~~~~~~~~~---~~~la~~~i~  442 (581)
                           |..||+-+..+.     ++++.  + +...|   .+-+++.||+.-+.|-+|+.+.......   -..+|.++ .
T Consensus       310 -----FLkEAAvMKeik-----HpNLV--q-LLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQI-s  375 (1157)
T KOG4278|consen  310 -----FLKEAAVMKEIK-----HPNLV--Q-LLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQI-S  375 (1157)
T ss_pred             -----HHHHHHHHHhhc-----CccHH--H-HhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHH-H
Confidence                 334444433221     11110  0 01112   2346999999999999999764322111   12233333 3


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD  499 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~  499 (581)
                      ..++.|-..+||||||-.-|-||.       .+.      -+++.|||+++-++.+.
T Consensus       376 SaMeYLEkknFIHRDLAARNCLVg-------Enh------iVKvADFGLsRlMtgDT  419 (1157)
T KOG4278|consen  376 SAMEYLEKKNFIHRDLAARNCLVG-------ENH------IVKVADFGLSRLMTGDT  419 (1157)
T ss_pred             HHHHHHHHhhhhhhhhhhhhcccc-------ccc------eEEeeccchhhhhcCCc
Confidence            347778889999999999999999       554      79999999988776544

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.53  E-value=7.2e-07  Score=89.49  Aligned_cols=33  Identities=21%  Similarity=0.388  Sum_probs=26.7

Q ss_pred             CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      ..++|+|+|||||+++       ++       .+.+|||+.++.=++
T Consensus       153 ~~~~HgD~~~~Nii~~-------~~-------~~~iIDwe~a~~Gdp  185 (226)
T TIGR02172       153 STCLHGDFQIGNLITS-------GK-------GTYWIDLGDFGYGNP  185 (226)
T ss_pred             CceEecCCCCCcEEEc-------CC-------CcEEEechhcCcCCH
Confidence            5789999999999998       43       488999998875443

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.50  E-value=1.4e-07  Score=104.21  Aligned_cols=137  Identities=18%  Similarity=0.192  Sum_probs=85.1

Q ss_pred             EEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHhhhC--CeEecCCCCCCEEEeecccccccccccCCCCeE
Q 008021          408 VLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALLKMLLVD--NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV  484 (581)
Q Consensus       408 VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l~~L~~~--G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~l  484 (581)
                      ++|.|.+.+++|..|.+....- .+.-..-++.+++- |..||.+  -++|||||-.||+|+.      ..|      +|
T Consensus       119 n~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkG-L~yLHs~~PPIIHRDLKCDNIFinG------~~G------~V  185 (632)
T KOG0584|consen  119 NFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKG-LVYLHSQDPPIIHRDLKCDNIFVNG------NLG------EV  185 (632)
T ss_pred             eeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHH-hhhhhcCCCCccccccccceEEEcC------CcC------ce
Confidence            6899999999999998653221 11112233333332 5666654  6999999999999982      456      99


Q ss_pred             EEEecccccccCHhhHH----------------HHHHHHHHHHhhcHHHHHHHHHhhcC--C--CCCCCHHHHHHHHHHh
Q 008021          485 IFLDVGMTAELSKTDRV----------------NLVEFFKAVARRDGRTAAECTLRLSK--Q--QNCPNPKAFIEWMRLL  544 (581)
Q Consensus       485 vLiDFGl~~~L~~~~r~----------------~l~~l~~Al~~~D~~~~~e~ll~l~~--~--~~~~D~~~f~~~l~~l  544 (581)
                      +|-|.|+++.+....-.                +|.++      =|.|..+-+||+|..  +  ..|.++.+..+.+-.=
T Consensus       186 KIGDLGLAtl~r~s~aksvIGTPEFMAPEmYEE~YnE~------VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SG  259 (632)
T KOG0584|consen  186 KIGDLGLATLLRKSHAKSVIGTPEFMAPEMYEENYNEL------VDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSG  259 (632)
T ss_pred             eecchhHHHHhhccccceeccCccccChHHHhhhcchh------hhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcC
Confidence            99999998876433222                22222      266777888888743  3  3588887766554432


Q ss_pred             hhH-hhc---cccHHHHHHHHHH
Q 008021          545 PSG-VLR---RVIWSILLSACSN  563 (581)
Q Consensus       545 ~~~-~~~---~~~~~~ll~~~~~  563 (581)
                      +.. .|.   +..+.+++-.|..
T Consensus       260 iKP~sl~kV~dPevr~fIekCl~  282 (632)
T KOG0584|consen  260 IKPAALSKVKDPEVREFIEKCLA  282 (632)
T ss_pred             CCHHHhhccCCHHHHHHHHHHhc
Confidence            222 232   3345555544443

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=98.49  E-value=3.4e-07  Score=101.01  Aligned_cols=149  Identities=21%  Similarity=0.278  Sum_probs=93.6

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +-||.|-||.||+|+..+.   ++++.--||||+-+.+-.                    |       ++ -        
T Consensus       395 r~iG~GqFGdVy~gvYt~~---~kge~iaVAvKtCK~d~t--------------------~-------d~-t--------  435 (974)
T KOG4257|consen  395 RLIGEGQFGDVYKGVYTDP---EKGERIAVAVKTCKTDCT--------------------P-------DD-T--------  435 (974)
T ss_pred             HhhcCCcccceeeeEeccc---ccCcceeeeeehhccCCC--------------------h-------hh-H--------
Confidence            5699999999999998752   122345689998654411                    0       11 0        


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhcchhhH-HHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQGHERLK-SALAHIGTHALLKM  447 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~-~~la~~~i~a~l~~  447 (581)
                        -.|..||--++.|    . ++++.  +.+.- -..+-++|||..+-+-|.+|++.....-... ..+....+...+..
T Consensus       436 --ekflqEa~iMrnf----d-HphIi--kLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaY  506 (974)
T KOG4257|consen  436 --EKFLQEASIMRNF----D-HPHII--KLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAY  506 (974)
T ss_pred             --HHHHHHHHHHHhC----C-Ccchh--heeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHH
Confidence              1345566555433    2 22211  11111 1134469999999999999987533221111 11112223344777


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD  499 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~  499 (581)
                      |...+|||||+-.-||||.       ...      .++|.|||+++-++++.
T Consensus       507 LeSkrfVHRDIAaRNiLVs-------Sp~------CVKLaDFGLSR~~ed~~  545 (974)
T KOG4257|consen  507 LESKRFVHRDIAARNILVS-------SPQ------CVKLADFGLSRYLEDDA  545 (974)
T ss_pred             HHhhchhhhhhhhhheeec-------Ccc------eeeecccchhhhccccc
Confidence            8899999999999999998       333      79999999999887654

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.46  E-value=8.1e-06  Score=81.89  Aligned_cols=34  Identities=24%  Similarity=0.282  Sum_probs=27.5

Q ss_pred             CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      ..++|+|+||+|||++       .++      .+.||||+.++.=++
T Consensus       163 ~~l~HgD~~~~Nil~~-------~~~------~~~iIDwe~a~~gdp  196 (244)
T cd05150         163 LVVTHGDACLPNIIVD-------PGK------FSGFIDLGRLGVADR  196 (244)
T ss_pred             eEEECCCCCCccEEEe-------CCc------EEEEEEccccccccH
Confidence            4599999999999998       444      577999998875443

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PRK10593 hypothetical protein; Provisional

Probab=98.45  E-value=3.3e-06  Score=88.15  Aligned_cols=93  Identities=16%  Similarity=0.022  Sum_probs=63.9

Q ss_pred             HHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHh
Q 008021          267 YTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKIS  346 (581)
Q Consensus       267 ~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~  346 (581)
                      .+++.+.+.+|..+.      +.++||.|.+++||+....+         ..+.||+.+.....                
T Consensus         3 ~~~~~~~~~~~~~~~------~~~~i~~G~~~~vy~~~~~~---------~~~~~k~~~~~~~~----------------   51 (297)
T PRK10593          3 QLRAELSHLLGEKLS------RVECISEQPYAALWALYDSQ---------GNPMPLMARSFSTP----------------   51 (297)
T ss_pred             HHHHHHHHHhchhhh------eeeecCCccceeEEEEEcCC---------CCEEEEEecccccc----------------
Confidence            456677777776432      25899999999999997642         35888985432000                


Q ss_pred             cccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc-----CCCCcEEEEeccCCccH
Q 008021          347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-----LVHPAVLVETYEQGECV  419 (581)
Q Consensus       347 ~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-----l~t~~VLVmEyi~G~~L  419 (581)
                                               -.+..|+.++..+.+    ...+.+|+++.-     ..+..+|||||++|.++
T Consensus        52 -------------------------~~~~~Ea~~L~~L~~----~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         52 -------------------------GVAQQEAWKLSMLAR----SGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV  100 (297)
T ss_pred             -------------------------hHHHHHHHHHHHHcc----CCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence                                     024568888876643    235889999942     23557999999999876

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.43  E-value=5.8e-06  Score=80.66  Aligned_cols=76  Identities=21%  Similarity=0.242  Sum_probs=50.2

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC-chhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG-VGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~-v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      +|++.|..++||+.+..+         ..+++|+.++. ..                                       
T Consensus         3 ~~l~~G~~n~~~~v~~~~---------~~~vlK~~~~~~~~---------------------------------------   34 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD---------GRYVLKFYRPPDAA---------------------------------------   34 (239)
T ss_dssp             EEEEESSSSEEEEEEETT---------SEEEEEEESSHHHH---------------------------------------
T ss_pred             ccCCCCCeeeEEEEEECC---------cEEEEEEeCCCCCH---------------------------------------
Confidence            689999999999999853         59999986654 11                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc-----cCCCCcEEEEeccCCccHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY-----PLVHPAVLVETYEQGECVSR  421 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~-----~l~t~~VLVmEyi~G~~L~~  421 (581)
                         -+...|+..+..+.+.     .+.+|+++.     ......+++|+|++|.++..
T Consensus        35 ---~~~~~e~~~~~~l~~~-----~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   35 ---ERLRREAAVLRQLAEH-----GIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD   84 (239)
T ss_dssp             ---HHHHHHHHHHHHHHHT-----TSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred             ---HHHHHHHHHHHHHHhc-----CCCCceEEeecccccccccceEEEEEeccccccc
Confidence               1123444444444432     236788875     12223589999999999888

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.43  E-value=1.8e-06  Score=98.64  Aligned_cols=190  Identities=15%  Similarity=0.158  Sum_probs=108.1

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      ++|+|.+|||++|..+....+.......||||.......+.-.                                +.+..
T Consensus       303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~--------------------------------~~~~~  350 (609)
T KOG0200|consen  303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEK--------------------------------KDLMS  350 (609)
T ss_pred             eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHH--------------------------------HHHHH
Confidence            9999999999999986421110011478999987766433110                                11222


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCcc-cccccccCCCCcEEEEeccCCccHHHHHHhhh------cch--------hhHHH
Q 008021          371 QVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYPLVHPAVLVETYEQGECVSRYVDELQ------GHE--------RLKSA  435 (581)
Q Consensus       371 ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~------~~~--------~~~~~  435 (581)
                      |++.....      .    .++++. ....... ..+..+|+||++.+.|.+++....      ...        ....+
T Consensus       351 El~~m~~~------g----~H~niv~llG~~t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~d  419 (609)
T KOG0200|consen  351 ELNVLKEL------G----KHPNIVNLLGACTQ-DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKD  419 (609)
T ss_pred             HHHHHHHh------c----CCcchhhheeeecc-CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHH
Confidence            23222221      1    111111 1111111 344679999999999999987644      000        11122


Q ss_pred             HHHHHHH--HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHH-------HHHH
Q 008021          436 LAHIGTH--ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVN-------LVEF  506 (581)
Q Consensus       436 la~~~i~--a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~-------l~~l  506 (581)
                      +.....+  .-++.|....+||||+-.-|||+.       .+.      .+++.|||+++...++.-..       +---
T Consensus       420 Llsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~-------~~~------~~kIaDFGlar~~~~~~~y~~~~~~~~LP~k  486 (609)
T KOG0200|consen  420 LLSFAYQIANGMEYLASVPCVHRDLAARNVLIT-------KNK------VIKIADFGLARDHYNKDYYRTKSSAGTLPVK  486 (609)
T ss_pred             HHHHHHHHHHHHHHHhhCCccchhhhhhhEEec-------CCC------EEEEccccceeccCCCCceEecCCCCcccee
Confidence            2222222  225667788999999999999999       554      79999999998543322110       1101


Q ss_pred             HHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          507 FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       507 ~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      |.         +.|++-+ .......|+|.|+--|.|+++
T Consensus       487 Wm---------ApEsl~~-~~ft~kSDVWSfGI~L~Eifs  516 (609)
T KOG0200|consen  487 WM---------APESLFD-RVFTSKSDVWSFGILLWEIFT  516 (609)
T ss_pred             ec---------CHHHhcc-CcccccchhhHHHHHHHHHhh
Confidence            22         2255555 333345588888887777654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.38  E-value=3e-07  Score=108.03  Aligned_cols=132  Identities=8%  Similarity=-0.040  Sum_probs=78.0

Q ss_pred             cEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccc-------
Q 008021          407 AVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL-------  477 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~-------  477 (581)
                      -|++|||. +.+|.++++....  .......+...++++ +..+|..||+||||||.|||+.       ..|.       
T Consensus        55 ~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~a-l~~lH~~gIvHrDlKP~NiLl~-------~~~~~k~~d~~  125 (793)
T PLN00181         55 IVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEI-VNAAHSQGIVVHNVRPSCFVMS-------SFNHVSFIESA  125 (793)
T ss_pred             hhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHH-HHHHHhCCeeeccCCchhEEEc-------ccCcEEEeecc
Confidence            46788987 5589999864221  111122344444444 7889999999999999999996       2220       


Q ss_pred             ------cCCCCeEEEEecccccccCHhhHHHHHHHH-----------HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHH
Q 008021          478 ------FRSKPHVIFLDVGMTAELSKTDRVNLVEFF-----------KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEW  540 (581)
Q Consensus       478 ------~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~-----------~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~  540 (581)
                            ......+++.|||+++.........+..+-           ...+..-+|.++|.+.. ..+....|.|.|+..
T Consensus       126 ~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDVwSlGvi  204 (793)
T PLN00181        126 SCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG-SSSNCASDVYRLGVL  204 (793)
T ss_pred             ccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc-CCCCchhhhhhHHHH
Confidence                  001125777777776643211100000000           00011223677887654 345567899999999


Q ss_pred             HHHhhhHh
Q 008021          541 MRLLPSGV  548 (581)
Q Consensus       541 l~~l~~~~  548 (581)
                      |.+|+.+.
T Consensus       205 L~ELl~~~  212 (793)
T PLN00181        205 LFELFCPV  212 (793)
T ss_pred             HHHHhhCC
Confidence            99998753

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.36  E-value=7.2e-06  Score=79.02  Aligned_cols=171  Identities=20%  Similarity=0.208  Sum_probs=104.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+-+|.|..+.||.+..+         |.+||+|+++++-..                                      
T Consensus        27 ~~~L~KG~~s~Vyl~~~~---------~~~~a~Kvrr~ds~r--------------------------------------   59 (201)
T COG2112          27 EKELAKGTTSVVYLGEWR---------GGEVALKVRRRDSPR--------------------------------------   59 (201)
T ss_pred             hhhhhcccccEEEEeecc---------CceEEEEEecCCcch--------------------------------------
Confidence            466899999999999986         579999999987321                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                         =++..||+-++.....      -..|++|  +-++..+.|||++|.+|.++....     .++.+-...-+++  -|
T Consensus        60 ---~~l~kEakiLeil~g~------~~~p~vy--~yg~~~i~me~i~G~~L~~~~~~~-----~rk~l~~vlE~a~--~L  121 (201)
T COG2112          60 ---RNLEKEAKILEILAGE------GVTPEVY--FYGEDFIRMEYIDGRPLGKLEIGG-----DRKHLLRVLEKAY--KL  121 (201)
T ss_pred             ---hhHHHHHHHHHHhhhc------CCCceEE--EechhhhhhhhhcCcchhhhhhcc-----cHHHHHHHHHHHH--HH
Confidence               1234466655544322      2357766  556777889999999999875321     1233332222222  23


Q ss_pred             hhCCeEecCCCCC--CEEEeecccccccccccCCCCeEEEEeccccc-ccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          449 LVDNFIHADMHPG--NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA-ELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       449 ~~~G~~H~DlHPG--NILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~-~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      =..|+-|..++-+  ||++.        ++      ++.||||--++ ...+..-..++.+   +... +-+..+.++. 
T Consensus       122 D~~GI~H~El~~~~k~vlv~--------~~------~~~iIDFd~At~k~~p~N~Tq~~sl---L~~~-g~r~~~~i~~-  182 (201)
T COG2112         122 DRLGIEHGELSRPWKNVLVN--------DR------DVYIIDFDSATFKKKPRNVTQALSL---LFRE-GLRIEKTILR-  182 (201)
T ss_pred             HHhccchhhhcCCceeEEec--------CC------cEEEEEccchhhccCCchHHHHHHH---HHhc-ccchHHHHHH-
Confidence            4578999998833  55554        44      79999999887 3333333333322   2222 2344444433 


Q ss_pred             cCCCCCCCHHHHHHHHHHh
Q 008021          526 SKQQNCPNPKAFIEWMRLL  544 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l  544 (581)
                      . +..+.++++|.+++.+.
T Consensus       183 ~-~k~~~~~~~f~~~l~~~  200 (201)
T COG2112         183 G-YKYGKNPEEFMRELLKV  200 (201)
T ss_pred             h-hhccCCHHHHHHHHHhc
Confidence            2 22466888888887654

>PRK05231 homoserine kinase; Provisional

Probab=98.33  E-value=1.4e-05  Score=83.61  Aligned_cols=50  Identities=8%  Similarity=-0.045  Sum_probs=34.8

Q ss_pred             CCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEec
Q 008021          261 PEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH  325 (581)
Q Consensus       261 pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~  325 (581)
                      .+.+.+++++++ +.+|.  .++   .+-++++.|...++|+....+         ..+++|+.+
T Consensus         5 t~ls~~~l~~~l-~~y~~--~~~---~~~~~l~~G~~n~~y~v~t~~---------g~~vLK~~~   54 (319)
T PRK05231          5 TDVSDDELAAFL-APYDL--GEL---LSLKGIAEGIENSNFFLTTTQ---------GEYVLTLFE   54 (319)
T ss_pred             ccCCHHHHHHHH-HhcCC--chh---hccchhccccccceEEEEeCC---------CcEEEEEec
Confidence            456777887777 66765  121   124689999999999987642         368899854

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.27  E-value=5e-05  Score=82.48  Aligned_cols=89  Identities=25%  Similarity=0.076  Sum_probs=57.6

Q ss_pred             CCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       287 fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      .+.++||.|-+..||+.++.+   |    ++.|+||...|.++..-              +.+|    +.++        
T Consensus        29 ~~~~elggGn~N~VyrV~~~~---g----~~svIVKqa~p~~r~~g--------------~~wp----l~~e--------   75 (401)
T PRK09550         29 LTAREIGDGNLNLVFRVSDTE---G----GKSVIVKQALPYVRVVG--------------ESWP----LTLD--------   75 (401)
T ss_pred             ceeeEcCCCceEEEEEEEeCC---C----CeEEEEEecCccccccc--------------cccc----ccHH--------
Confidence            446899999999999999864   2    36999998766532100              0001    0110        


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCcc
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC  418 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~  418 (581)
                            -+..|++.+..+.+.    ....+|++|.--....++||||+++.+
T Consensus        76 ------R~~~Eae~L~~l~~~----~p~~VPkV~~~D~~~~~lVME~L~~~~  117 (401)
T PRK09550         76 ------RARIEAEALKIQAKY----VPDLVPKVYHYDEELAVTVMEDLSDHK  117 (401)
T ss_pred             ------HHHHHHHHHHHHHhh----CCCCCCeEEEECCCCCEEEEecCCCcc
Confidence                  123466666655432    345699999766666899999998754

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.26  E-value=1e-05  Score=81.02  Aligned_cols=34  Identities=29%  Similarity=0.507  Sum_probs=27.0

Q ss_pred             CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      .+++|+|+||+|||++       .++      -..+||||.+..=++
T Consensus       164 ~~l~HGD~~~~Nvlv~-------~~~------i~giIDw~~a~~gDp  197 (235)
T cd05155         164 PVWFHGDLAPGNLLVQ-------DGR------LSAVIDFGCLGVGDP  197 (235)
T ss_pred             ceEEeCCCCCCcEEEE-------CCC------EEEEEeCcccCcCCh
Confidence            4699999999999998       433      356999998776544

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.26  E-value=1.3e-05  Score=83.29  Aligned_cols=163  Identities=19%  Similarity=0.166  Sum_probs=83.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||.|+.+-||++++..|       |++.|||+..-.- +.-..+++.++.-.-....+++.+  +.           
T Consensus        17 ~~~i~~g~~~~v~~v~d~~t-------~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~--~p-----------   75 (288)
T PF14531_consen   17 GRIIGKGGFSIVFEVTDVET-------GEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVK--NP-----------   75 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------TEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT----SH-----------
T ss_pred             ccccccCCceEEEEEEEccC-------CceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCC--CH-----------
Confidence            68999999999999999886       7999999976332 344445544443332222222111  00           


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccc---cccccC-------CCCcEEEEeccCCccHHHHHHhhhcchhh---HHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFP---KPVYPL-------VHPAVLVETYEQGECVSRYVDELQGHERL---KSA  435 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP---~~~~~l-------~t~~VLVmEyi~G~~L~~~l~~~~~~~~~---~~~  435 (581)
                             .+|..--+|.-   ...-+.+|   .....-       .-..++.|.-..+ +|.+++.........   ...
T Consensus        76 -------~~a~~~~r~l~---P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~  144 (288)
T PF14531_consen   76 -------KEAYRHLRFLV---PLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAF  144 (288)
T ss_dssp             -------HHHHHHH-B------SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHH
T ss_pred             -------HHHHHhceEEe---eeEEEEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHH
Confidence                   12222222211   11111121   111100       1133567777644 566665432111111   111


Q ss_pred             HH-----HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          436 LA-----HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       436 la-----~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      .+     .+.++ +...+|..|++|+|++|.|++++       .+|      .+.|-||+.+.....
T Consensus       145 ~arl~lT~Q~I~-lvA~Lh~~GlVHgdi~~~nfll~-------~~G------~v~Lg~F~~~~r~g~  197 (288)
T PF14531_consen  145 AARLSLTVQMIR-LVANLHSYGLVHGDIKPENFLLD-------QDG------GVFLGDFSSLVRAGT  197 (288)
T ss_dssp             HHHHHHHHHHHH-HHHHHHHTTEEEST-SGGGEEE--------TTS-------EEE--GGGEEETTE
T ss_pred             HHHHHHHHHHHH-HHHHHhhcceEecccceeeEEEc-------CCC------CEEEcChHHHeecCc
Confidence            22     22222 35668999999999999999999       788      999999998765543

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=98.24  E-value=1.5e-06  Score=90.45  Aligned_cols=162  Identities=16%  Similarity=0.185  Sum_probs=107.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||-|.-+-||.+....        |++.++|+-+-|     +.-++.++.--.....-....|+-|..+-       
T Consensus        97 GnqIGVGKESDIY~v~d~~--------G~~~~lK~HRLG-----RtSFR~Vk~kRDY~r~r~~~sWlyLSRla-------  156 (465)
T KOG2268|consen   97 GNQIGVGKESDIYVVADEE--------GNPLILKLHRLG-----RTSFRNVKNKRDYLRKRKSGSWLYLSRLA-------  156 (465)
T ss_pred             ccccccccccceEEEecCC--------CCchhHHHHhhh-----hhhHHHhhhhhhhHhcCCccchhhhHHHH-------
Confidence            4679999999999998865        799999987655     11222222211111111223366554332       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                           -..|-.-+..+.+     .+..+|+|+  -+.+++.|||+++|.||.+.-+-     .....+...++. ++.-|
T Consensus       157 -----a~kEfafmkaL~e-----~gfpVPkpi--D~~RH~Vvmelv~g~Pl~~v~~v-----~d~~~ly~~lm~-~Iv~l  218 (465)
T KOG2268|consen  157 -----ATKEFAFMKALYE-----RGFPVPKPI--DHNRHCVVMELVDGYPLRQVRHV-----EDPPTLYDDLMG-LIVRL  218 (465)
T ss_pred             -----HHHHHHHHHHHHH-----cCCCCCCcc--cccceeeHHHhhcccceeeeeec-----CChHHHHHHHHH-HHHHH
Confidence                 2344445555543     357789888  57889999999999999875321     112344444443 35556


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHH
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRV  501 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~  501 (581)
                      -.+|+||+|-.--||||.       .++      ++++|||-.+...+..+-.
T Consensus       219 a~~GlIHgDFNEFNimv~-------dd~------~i~vIDFPQmvS~sh~nA~  258 (465)
T KOG2268|consen  219 ANHGLIHGDFNEFNIMVK-------DDD------KIVVIDFPQMVSTSHPNAE  258 (465)
T ss_pred             HHcCceecccchheeEEe-------cCC------CEEEeechHhhccCCCccc
Confidence            789999999999999999       666      8999999988777765443

>PLN02756 S-methyl-5-thioribose kinase

Probab=98.15  E-value=6.6e-05  Score=81.53  Aligned_cols=85  Identities=14%  Similarity=0.020  Sum_probs=54.6

Q ss_pred             cCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccccccc-ChhHHHHHH
Q 008021          286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWL-RLDESVQQF  364 (581)
Q Consensus       286 ~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l-~l~e~v~ef  364 (581)
                      ....++||-|.+-.||+-+..         +..|+||...|.++.                   ++-.|. .++.   + 
T Consensus        34 ~l~~~eiggGn~N~VyrV~~~---------~~svVVKqa~p~~r~-------------------vga~wpl~~~R---~-   81 (418)
T PLN02756         34 DLKIKEVGDGNLNFVYIVVSS---------SGSFVIKQALPYIRC-------------------IGESWPMTKER---A-   81 (418)
T ss_pred             CceEEEcCCCceeeEEEEEcC---------CccEEEEeCCccccC-------------------CCccccCCccH---H-
Confidence            345789999999999997752         357999988877531                   111111 1111   0 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCC
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG  416 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G  416 (581)
                                ..|++.+....+    ...+.+|++|.--....+++|||++|
T Consensus        82 ----------~~Ea~aL~~~~~----~~p~~VPkVy~~ded~~vlvME~L~~  119 (418)
T PLN02756         82 ----------YFEATALREHGR----LCPDHVPEVYHFDRTMALIGMRYLEP  119 (418)
T ss_pred             ----------HHHHHHHHHhhh----cCCCCCCeEEEECCCCCEEEEeecCC
Confidence                      224444543322    23468999997666778999999988

>PRK12396 5-methylribose kinase; Reviewed

Probab=98.08  E-value=2.6e-05  Score=84.27  Aligned_cols=112  Identities=14%  Similarity=-0.036  Sum_probs=64.7

Q ss_pred             CCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHH
Q 008021          259 KAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVI  338 (581)
Q Consensus       259 ~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~i  338 (581)
                      ...++..+.+..-+.+.+|. +..- +...-++||-|-..-||++.+..   |    ++.|+||--.|-++.        
T Consensus         6 ~y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~---~----~~svIVKQAlp~vRv--------   68 (409)
T PRK12396          6 KYFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQ---K----NISVIVKQAGDTARI--------   68 (409)
T ss_pred             cceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCC---C----CceEEEEeccHhhcc--------
Confidence            34455666666666555552 1110 23346899999999999999843   2    468999976554331        


Q ss_pred             HHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCC
Q 008021          339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG  416 (581)
Q Consensus       339 l~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G  416 (581)
                             .+-+|    +.++..              +.|+..+..+.+..   | -.+|++|.--....++|||+++.
T Consensus        69 -------~~swp----L~~~R~--------------~~E~~aL~~~~~~~---P-~~VP~vy~~D~e~~~~vMEdL~~  117 (409)
T PRK12396         69 -------SDEFK----LSTNRI--------------RIESDVLQLEEELA---P-GLVPKVYLFDSVMNCCVMEDLSD  117 (409)
T ss_pred             -------CCCCC----CChHHH--------------HHHHHHHHHHHhhC---C-CcCCeEEEECcHHhhHHHHhCcc
Confidence                   01111    111111              23555555443321   2 23888887666677899999854

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.06  E-value=0.00019  Score=72.80  Aligned_cols=33  Identities=18%  Similarity=0.245  Sum_probs=27.2

Q ss_pred             CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      ..++|+|+|||||+++       .+       .+.+|||..++.=++
T Consensus       146 ~~l~H~Dl~~~Nil~~-------~~-------~~~lIDwE~a~~gdp  178 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVT-------PQ-------GLKLIDWEYASDGDI  178 (256)
T ss_pred             CeeecCCCCcCcEEEe-------CC-------CCEEEeccccCcCCH
Confidence            3699999999999998       44       378999998876554

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=98.01  E-value=4.2e-05  Score=78.87  Aligned_cols=32  Identities=22%  Similarity=0.259  Sum_probs=26.8

Q ss_pred             CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      .+++|+|+||+||+++       .++      .+.++||+.+..=
T Consensus       175 ~~l~HgD~~~~Nil~~-------~~~------~~~iIDfe~a~~g  206 (296)
T cd05153         175 RGVIHADLFRDNVLFD-------GDE------LSGVIDFYFACTD  206 (296)
T ss_pred             CcCCccCcCcccEEEe-------CCc------eEEEeehhhhcCc
Confidence            6899999999999998       544      5689999987753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.97  E-value=5.2e-05  Score=82.25  Aligned_cols=141  Identities=16%  Similarity=0.208  Sum_probs=81.9

Q ss_pred             hhhhhc---cCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC--chhhHHHHHHHHHHHHHHhcccccccc
Q 008021          280 LSEIFD---GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG--VGESIRRDFVIINLAAKISSVIPAVKW  354 (581)
Q Consensus       280 ~~eiF~---~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~--v~~~i~~Dl~il~~la~~~~~~p~l~~  354 (581)
                      +.+.|.   ..-.+.+|=|-|..|+.|.+..+       .+-||+||++-.  ..+.--.++++|+.++.--...+.   
T Consensus        71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~-------~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~---  140 (590)
T KOG1290|consen   71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQN-------KRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPG---  140 (590)
T ss_pred             ccccccCceEEEEEeccccccceeEEEeeccC-------CeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCC---
Confidence            455554   22257899999999999999764       689999998743  222333333333332211000000   


Q ss_pred             cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCC----cEEEEeccCCccHHHHHHhhh--c
Q 008021          355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP----AVLVETYEQGECVSRYVDELQ--G  428 (581)
Q Consensus       355 l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~----~VLVmEyi~G~~L~~~l~~~~--~  428 (581)
                                             .+.+.++.+.|+             .+++    -++|.|++ |..|-.++....  +
T Consensus       141 -----------------------~~~VV~LlD~Fk-------------hsGpNG~HVCMVfEvL-GdnLLklI~~s~YrG  183 (590)
T KOG1290|consen  141 -----------------------KKCVVQLLDHFK-------------HSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRG  183 (590)
T ss_pred             -----------------------Cceeeeeeccce-------------ecCCCCcEEEEEehhh-hhHHHHHHHHhCCCC
Confidence                                   001111112221             1122    26899988 888888775421  1


Q ss_pred             -chhhHHHHHHHHHHHHHHHhhh-CCeEecCCCCCCEEEeec
Q 008021          429 -HERLKSALAHIGTHALLKMLLV-DNFIHADMHPGNILVRVA  468 (581)
Q Consensus       429 -~~~~~~~la~~~i~a~l~~L~~-~G~~H~DlHPGNILV~~~  468 (581)
                       +-..-++|+..++.. |..||+ .|+||.||||.|||+...
T Consensus       184 lpl~~VK~I~~qvL~G-LdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  184 LPLSCVKEICRQVLTG-LDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CcHHHHHHHHHHHHHH-HHHHHHhcCccccCCCcceeeeecc
Confidence             112234566655544 777885 799999999999999755

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.90  E-value=0.00015  Score=72.21  Aligned_cols=34  Identities=29%  Similarity=0.422  Sum_probs=27.7

Q ss_pred             CCeEecCCCCCCEEEeeccccccc-ccccCCCCeEEEEecccccccCH
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQ-KRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~-~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      .+++|+|+||+|||++       . ++      .+.||||-.++.-++
T Consensus       170 ~~l~H~Dl~~~Nil~~-------~~~~------~~~lIDwe~a~~~~~  204 (235)
T cd05157         170 IVFCHNDLLSGNIIYN-------EEKN------SVKFIDYEYAGYNYR  204 (235)
T ss_pred             EEEEcCCCCcCcEEEe-------CCCC------CEEEEEcccCCcCch
Confidence            4799999999999998       4 34      799999988775433

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK09902 hypothetical protein; Provisional

Probab=97.87  E-value=0.00033  Score=69.75  Aligned_cols=150  Identities=19%  Similarity=0.158  Sum_probs=98.4

Q ss_pred             cCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHH
Q 008021          286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA  365 (581)
Q Consensus       286 ~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~  365 (581)
                      .+|+---+.|+.+.|++-.+.         |+.+=||-|.-.+....               .+|.              
T Consensus        20 wve~pN~~rgG~SgV~r~~~~---------g~~~ylKrq~nhl~~s~---------------r~P~--------------   61 (216)
T PRK09902         20 WVEEPNYRRNGMSGVQCVERN---------GKKLYVKRMTHHLFHSV---------------RYPF--------------   61 (216)
T ss_pred             eecCCCcCCCCcceEEEEEeC---------CcEEEEEeccCcccccc---------------cCCC--------------
Confidence            455555677999999997763         46799997753332211               0121              


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC------CCCcEEEEeccCC-ccHHHHHHhhhc---chhhHHH
Q 008021          366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL------VHPAVLVETYEQG-ECVSRYVDELQG---HERLKSA  435 (581)
Q Consensus       366 ~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l------~t~~VLVmEyi~G-~~L~~~l~~~~~---~~~~~~~  435 (581)
                          -+--|.+|-.++.++.+.     ++.+|+|+..-      .-+.+||+|-++| .+|.+++.+...   ....+..
T Consensus        62 ----g~ptf~rE~~~L~~L~~~-----GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~  132 (216)
T PRK09902         62 ----GRPTIVREVAVIKELERA-----GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQA  132 (216)
T ss_pred             ----CchHHHHHHHHHHHHHHc-----CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHH
Confidence                123356677888887654     67788887332      1236899998876 588888754211   2222344


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE  494 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~  494 (581)
                      +...+.. .+..+|..|+.|+||-|-||+++       .+|    +.++.||||--+..
T Consensus       133 il~~va~-~ia~LH~~Gv~Hgdly~khIll~-------~~g----~~~v~lIDlEk~r~  179 (216)
T PRK09902        133 MLKAVAL-AFKKMHSVNRQHGCCYVRHIYVK-------TEG----KAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHH-HHHHHHHCCCcCCCCCHhheeec-------CCC----CeeEEEEEhhccch
Confidence            4444443 48889999999999999999998       344    34699999975543

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.79  E-value=9.8e-05  Score=76.91  Aligned_cols=94  Identities=18%  Similarity=0.158  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHH
Q 008021          265 FAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK  344 (581)
Q Consensus       265 ~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~  344 (581)
                      |..+.+.|.+.+|.+..    --+.+||+.|++.++|+.+..         ++.+-||+....-...             
T Consensus         2 w~~i~~~~~~~~~~~~~----i~~~~~v~GG~i~~a~~~~~~---------~~~~FvK~~~~~~~~~-------------   55 (288)
T PF03881_consen    2 WQAIEQQISEQLGADFK----ITSIEPVSGGDINEAYRLDTD---------GGSYFVKVNSESGRDM-------------   55 (288)
T ss_dssp             HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEETT---------S-EEEEEEEEGGGCCH-------------
T ss_pred             hHHHHHHHHHHhCCCCc----eeeeEecCCCChhheEEEECC---------CccEEEEecChhhHHH-------------
Confidence            56788999999997631    112589999999999998832         5899999977442222             


Q ss_pred             HhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCc
Q 008021          345 ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGE  417 (581)
Q Consensus       345 ~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~  417 (581)
                                                   |..|+..++.+.+    ...+.+|+|+.-  .....+|+|||++..
T Consensus        56 -----------------------------f~~Ea~gL~~L~~----~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   56 -----------------------------FEGEAEGLKALAE----ANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             -----------------------------HHHHHHHHHHHCH----TTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             -----------------------------HHHHHHHHHHHHh----cCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence                                         3446666655532    245677887742  334567888888765

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.73  E-value=0.00045  Score=72.05  Aligned_cols=33  Identities=24%  Similarity=0.305  Sum_probs=27.5

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ..+++|+|+||+||+++       .++      ...+|||+.+..=
T Consensus       186 ~~~l~HgD~~~~Nvl~~-------~~~------~~~vIDfd~~~~~  218 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFD-------GDS------VKGVIDFYFACTD  218 (307)
T ss_pred             CCccCCCCCCcCcEEEE-------CCc------eEEEeecccccCc
Confidence            37899999999999998       554      5689999988643

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK06148 hypothetical protein; Provisional

Probab=97.68  E-value=0.0011  Score=80.07  Aligned_cols=56  Identities=18%  Similarity=0.220  Sum_probs=44.0

Q ss_pred             hhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC
Q 008021          256 LHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG  327 (581)
Q Consensus       256 Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~  327 (581)
                      +....|..+.+++.+.+++.||..-       +.+||++ ..-++|+.+..+        |+.+++|+.+|+
T Consensus         4 ~~~~~p~~s~~~~~~~~~~~ygl~~-------~~~~L~s-~~d~nf~v~~~~--------g~~yVLKi~~~~   59 (1013)
T PRK06148          4 LSHPAPEFTTKDAEALLAQHFGISA-------TATPLDG-ERDLNFRLTTDD--------GADYILKIVNPS   59 (1013)
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCce-------EEeecCC-cCCceEEEEeCC--------CCeEEEEEcCCc
Confidence            4456789999999999999999742       2367864 568899988643        578999998886

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.62  E-value=0.00036  Score=74.73  Aligned_cols=82  Identities=23%  Similarity=0.101  Sum_probs=49.3

Q ss_pred             ecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHH
Q 008021          292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ  371 (581)
Q Consensus       292 IgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~E  371 (581)
                      ||-|-..-||++....   |    ++.|+||--.|-++..              .+..|    +.++..           
T Consensus         3 igdGnlN~VfrV~~~~---g----~~svIVKQAlp~vRv~--------------g~~wp----l~~~R~-----------   46 (370)
T TIGR01767         3 VGDGNLNLVFHVYDQE---G----DRAAIVKQALPYVRVV--------------GESWP----LTLDRA-----------   46 (370)
T ss_pred             CCCCceEEEEEEEcCC---C----CeeEEEEEcCHHHhhc--------------CCCCC----CCccHH-----------
Confidence            6889999999999743   2    4789999766653210              00111    111111           


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCC
Q 008021          372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG  416 (581)
Q Consensus       372 lDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G  416 (581)
                         +.|+..+....+.   .| -.+|++|.--....++|||+++.
T Consensus        47 ---~~E~~~L~~~~~~---~P-~~vP~vy~~D~e~~~~vMEdL~~   84 (370)
T TIGR01767        47 ---RIESSALIRQGEH---VP-HLVPRIFHFDTEMAVTVMEDLSH   84 (370)
T ss_pred             ---HHHHHHHHHhhcc---Cc-cccCeEEEEccccceehHhhCcc
Confidence               2355555443322   12 25899887667778899999954

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.61  E-value=2.1e-05  Score=92.15  Aligned_cols=100  Identities=18%  Similarity=0.070  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccc--ccCHhhHHHHHHHHHHHH
Q 008021          434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA--ELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       434 ~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~--~L~~~~r~~l~~l~~Al~  511 (581)
                      .-++-++..+ ++|+|+.|+.|||+|.+||||+       .-+      =+.|.||..-+  .+++++-..|.-+|-.--
T Consensus       123 kWiaFQLL~a-l~qcH~~gVcHGDIKsENILiT-------SWN------W~~LtDFAsFKPtYLPeDNPadf~fFFDTSr  188 (1431)
T KOG1240|consen  123 KWIAFQLLKA-LSQCHKLGVCHGDIKSENILIT-------SWN------WLYLTDFASFKPTYLPEDNPADFTFFFDTSR  188 (1431)
T ss_pred             HHHHHHHHHH-HHHHHHcCccccccccceEEEe-------eec------hhhhhcccccCCccCCCCCcccceEEEecCC
Confidence            4455555555 8999999999999999999999       333      47788887654  456666555555555444


Q ss_pred             hhcHHHHHHHHHhhc----CCC------CCCCHHHHHHHHHHhhhH
Q 008021          512 RRDGRTAAECTLRLS----KQQ------NCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~----~~~------~~~D~~~f~~~l~~l~~~  547 (581)
                      ++--|-|+|-+...+    ..+      +..|.-+.+|.+.||+..
T Consensus       189 RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~E  234 (1431)
T KOG1240|consen  189 RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLE  234 (1431)
T ss_pred             ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhc
Confidence            555667777776633    111      234777779999998855

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=97.45  E-value=0.0008  Score=71.45  Aligned_cols=29  Identities=31%  Similarity=0.571  Sum_probs=24.5

Q ss_pred             eEecCCCCCCEEEeecccccccccccCCCCe-EEEEecccccc
Q 008021          453 FIHADMHPGNILVRVAQKKSSQKRLFRSKPH-VIFLDVGMTAE  494 (581)
Q Consensus       453 ~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~-lvLiDFGl~~~  494 (581)
                      +||+|+||+||+++       .++      . ..++|||-++.
T Consensus       199 iIH~D~~~~NVl~d-------~~~------~~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFD-------DDT------DVSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEc-------CCC------CeeeEEEcccccc
Confidence            99999999999999       333      3 78999998764

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.42  E-value=9.1e-05  Score=84.56  Aligned_cols=121  Identities=13%  Similarity=-0.000  Sum_probs=80.1

Q ss_pred             EeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEec
Q 008021          411 ETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDV  489 (581)
Q Consensus       411 mEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDF  489 (581)
                      |||+++ +|..++..... .......+-..++. -++.+|..|+-|+|+||.|+++.       ..|      .++++||
T Consensus       400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~-Gv~y~h~~GiahrdlK~enll~~-------~~g------~lki~Df  464 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLR-GVKYLHSMGLAHRDLKLENLLVT-------ENG------ILKIIDF  464 (601)
T ss_pred             hhcccH-HHHHHHhcccccchhhhhHHHHHHHH-HHHHHHhcCceeccCccccEEEe-------cCC------ceEEeec
Confidence            999999 88887654211 11111112222222 25778899999999999999999       777      8999999


Q ss_pred             ccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          490 GMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       490 Gl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+....-..-.+ ......+.-.|+|-|.|.+......+...|.|.-.-.+-.++.+
T Consensus       465 g~~~vf~~~~e~~-~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~  521 (601)
T KOG0590|consen  465 GAASVFRYPWEKN-IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILG  521 (601)
T ss_pred             CcceeeccCcchh-hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecC
Confidence            9877553332222 23345566788888888877766666677888765555544443

>PLN02236 choline kinase

Probab=97.42  E-value=0.003  Score=67.42  Aligned_cols=58  Identities=12%  Similarity=0.230  Sum_probs=37.3

Q ss_pred             HHHHHHHHHhCCChhhhh--ccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCc
Q 008021          267 YTKKTIERAFGRRLSEIF--DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV  328 (581)
Q Consensus       267 ~~~~~le~elG~~~~eiF--~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v  328 (581)
                      .+.+++.+ ++..|.++.  +.++-+|+-.|---++|+......   ....++.|++|+-.++.
T Consensus        18 ~~~~~~~~-~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~---~~~~~~~~v~Ri~g~~t   77 (344)
T PLN02236         18 ELKRILHS-LASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTK---EGNLGRKVLVRIYGEGV   77 (344)
T ss_pred             HHHHHHHH-hcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCC---CCCCCCeEEEEEccCCC
Confidence            45555554 555566542  345678898899999999876421   11124789999877663

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.38  E-value=0.0035  Score=64.89  Aligned_cols=35  Identities=23%  Similarity=0.430  Sum_probs=28.1

Q ss_pred             CCeEecCCCCCCEEEeecccccccccccCCCCe-EEEEecccccccCHh
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH-VIFLDVGMTAELSKT  498 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~-lvLiDFGl~~~L~~~  498 (581)
                      ..++|+|+||+|||++       +++      + ..++|||.++.-++.
T Consensus       185 ~~lvHGD~~~~Nilv~-------~~~------~~~gviDWe~a~iGDPa  220 (276)
T cd05152         185 TVLVHGDLHPGHILID-------EDA------RVTGLIDWTEAKVGDPA  220 (276)
T ss_pred             CeeEeCCCCCCcEEEe-------CCC------CEEEEECcHhcccCCHH
Confidence            4689999999999998       434      4 469999998876664

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.38  E-value=0.0018  Score=64.01  Aligned_cols=158  Identities=19%  Similarity=0.166  Sum_probs=89.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ..|||+|+-=-||.=-.          .....|||.+|+-...-...-             +.++.+......    +. 
T Consensus         6 ~~~i~~G~~R~cy~HP~----------dp~~cIKV~~~~~~~~~~~~~-------------~~~k~~~~~~~~----~~-   57 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHPD----------DPNLCIKVMRPDRGERRRPFK-------------RWLKRLRPKSRY----RQ-   57 (199)
T ss_pred             CcccccCCCceEEECCC----------CCCeEEEEEccccccccccch-------------hHHHhhcccchh----HH-
Confidence            67999999887776322          467899999998411110000             111111100111    11 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCC--cEEEEecc---C---CccHHHHHHhhhcchhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP--AVLVETYE---Q---GECVSRYVDELQGHERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~--~VLVmEyi---~---G~~L~~~l~~~~~~~~~~~~la~~~  440 (581)
                           .++|.+.-.+... -.+.....+|+.|....|.  .-+|+|.+   +   +.+|.+++....    ...++ ...
T Consensus        58 -----~~~E~~~y~~l~~-~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~~~-~~~  126 (199)
T PF10707_consen   58 -----NRRELRYYKQLSL-RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG----LTEEL-RQA  126 (199)
T ss_pred             -----HHHHHHHHHHHhh-ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC----ccHHH-HHH
Confidence                 2333333333322 2234456678777654443  35777775   2   357888875421    12233 334


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEe-cccccc
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD-VGMTAE  494 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiD-FGl~~~  494 (581)
                      ++.|.+.++.++++..|++|+||++....     +|    ..+++++| ||-..-
T Consensus       127 L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~-----~~----~~~lvlIDG~G~~~~  172 (199)
T PF10707_consen  127 LDEFKRYLLDHHIVIRDLNPHNIVVQRRD-----SG----EFRLVLIDGLGEKEL  172 (199)
T ss_pred             HHHHHHHHHHcCCeecCCCcccEEEEecC-----CC----ceEEEEEeCCCCccc
Confidence            56778889999999999999999998321     11    23799999 454443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK06149 hypothetical protein; Provisional

Probab=97.35  E-value=0.0028  Score=76.59  Aligned_cols=58  Identities=16%  Similarity=0.117  Sum_probs=43.0

Q ss_pred             HHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC
Q 008021          253 LSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG  327 (581)
Q Consensus       253 L~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~  327 (581)
                      +..+....|..+.+++++++++.||..-       +-.+++++.. ++|+.+..+         ..+++|+.+|.
T Consensus         7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~~-------~~~~L~s~~d-~nf~v~t~~---------~~yVLKi~~~~   64 (972)
T PRK06149          7 IDRSSLPAPDVSEAQAERILAEHYGLSG-------TLTELGSQQD-RNFRVDSDG---------GRFVLKICHAA   64 (972)
T ss_pred             hccCCCCCCCCCHHHHHHHHHHhcCCce-------EEEecCCcCc-ceEEEEecC---------CcEEEEeCCcc
Confidence            4556778899999999999999998641       1357765554 789876532         46888998886

>PRK11768 serine/threonine protein kinase; Provisional

Probab=97.34  E-value=0.004  Score=65.84  Aligned_cols=31  Identities=35%  Similarity=0.394  Sum_probs=25.6

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ..|++|+|+|||||+++       +        .+.++||+.++.=
T Consensus       195 ~~~liHgD~h~~NvL~~-------d--------~~~iIDFDd~~~g  225 (325)
T PRK11768        195 RLLRLHGDCHPGNILWR-------D--------GPHFVDLDDARMG  225 (325)
T ss_pred             CccceecCCCchhcccc-------C--------CcEEEeCCCCCCC
Confidence            45899999999999996       3        3678999988753

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.33  E-value=0.00037  Score=74.30  Aligned_cols=75  Identities=19%  Similarity=0.241  Sum_probs=53.1

Q ss_pred             EEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEE
Q 008021          408 VLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFL  487 (581)
Q Consensus       408 VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLi  487 (581)
                      +|||-..+ .+|.+|+...........-+..+++++ ...|+++|+-|||+|..|||+..++     |+    -|.+++.
T Consensus       319 ylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLEa-v~hL~~hgvAhRDlKSDNiL~Eldd-----D~----~P~LVva  387 (598)
T KOG4158|consen  319 YLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLEA-VTHLHKHGVAHRDLKSDNILLELDD-----DE----IPQLVVA  387 (598)
T ss_pred             EEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHHH-HHHHHHccchhhcccccceEEEecC-----CC----CcEEEEc
Confidence            78887654 478888765433333333344444444 6778999999999999999998542     22    4699999


Q ss_pred             eccccc
Q 008021          488 DVGMTA  493 (581)
Q Consensus       488 DFGl~~  493 (581)
                      |||++-
T Consensus       388 DFGCcL  393 (598)
T KOG4158|consen  388 DFGCCL  393 (598)
T ss_pred             ccceee
Confidence            999874

>PLN02876 acyl-CoA dehydrogenase

Probab=97.32  E-value=0.0031  Score=74.87  Aligned_cols=109  Identities=15%  Similarity=0.084  Sum_probs=64.6

Q ss_pred             CCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHH
Q 008021          263 HSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA  342 (581)
Q Consensus       263 ~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~l  342 (581)
                      .+.+.+.+-+.+.++. +..-...++-++++.|....+|+-+....  +   ....+++|...|+...            
T Consensus        18 ~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~--~---~~~~~VLR~~p~~~~~------------   79 (822)
T PLN02876         18 FDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNG--G---SVKRYVLRKKPPGKLL------------   79 (822)
T ss_pred             CCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCC--C---cceeEEEEeCCCCccC------------
Confidence            4555666666655432 11111124568899999999999876431  0   0147888876654210            


Q ss_pred             HHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC-----CCcEEEEeccCCc
Q 008021          343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV-----HPAVLVETYEQGE  417 (581)
Q Consensus       343 a~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~-----t~~VLVmEyi~G~  417 (581)
                                                ...-++.+|++.+..+..    ..++.+|+++....     +..++||||++|.
T Consensus        80 --------------------------~~~~~~~rE~~~l~~L~~----~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~  129 (822)
T PLN02876         80 --------------------------QSAHAVEREYQVLRALGE----HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGR  129 (822)
T ss_pred             --------------------------ccHHHHHHHHHHHHHHhh----cCCCCCCcEEEEecCCCcCCCceEEEEecCCc
Confidence                                      001234567666665532    34688899886322     3468999999998


Q ss_pred             cH
Q 008021          418 CV  419 (581)
Q Consensus       418 ~L  419 (581)
                      .+
T Consensus       130 ~~  131 (822)
T PLN02876        130 IF  131 (822)
T ss_pred             cc
Confidence            64

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.16  E-value=0.00069  Score=75.77  Aligned_cols=124  Identities=15%  Similarity=0.063  Sum_probs=83.3

Q ss_pred             cccccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccc
Q 008021          398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQK  475 (581)
Q Consensus       398 ~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~  475 (581)
                      .......++..++++|..|..+-.-+......  ......+++..  ..+.++|..|++|+|+||.||+++       .+
T Consensus        63 hyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aela--Lald~lh~l~iiyrd~k~enilld-------~~  133 (612)
T KOG0603|consen   63 HYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELA--LALDHLHKLGIAYRDYKLENVLLL-------LE  133 (612)
T ss_pred             eeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHH--HHHhhcchhHHHHhcccccceeec-------cc
Confidence            33334456667899999986655432211000  01112233322  237889999999999999999999       78


Q ss_pred             cccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          476 RLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       476 g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      |      .+++.|||+.++.-+....          .+++..+++.+..  ......|-|.|..-+-+++.+.
T Consensus       134 G------hi~~tdfglske~v~~~~~----------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~  188 (612)
T KOG0603|consen  134 G------HIKLTDFGLSKEAVKEKIA----------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGT  188 (612)
T ss_pred             C------ccccCCchhhhHhHhhhhc----------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCC
Confidence            8      9999999998877665544          5666666666665  2334678888888888888774

>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.15  E-value=0.0023  Score=67.29  Aligned_cols=197  Identities=18%  Similarity=0.236  Sum_probs=110.1

Q ss_pred             hhhccCCceeecccceeEEEEEEeccCCCCC---CCCCeEEEEEEecCCchhh------HHHHHHHHHHHHHHhcccccc
Q 008021          282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQ---KVKPIVVAVKVRHPGVGES------IRRDFVIINLAAKISSVIPAV  352 (581)
Q Consensus       282 eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~---~~~g~~VAVKV~~P~v~~~------i~~Dl~il~~la~~~~~~p~l  352 (581)
                      .+|+.++ --|+.|.-+.|.-|.--..-+|.   +.-.+++||||.+.-+.+-      |+.|++.-.+          +
T Consensus       251 gvle~i~-GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDR----------F  319 (531)
T KOG2269|consen  251 GVLESID-GIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDR----------F  319 (531)
T ss_pred             hhHHhhh-hhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhh----------h
Confidence            4566665 35788888888888432111221   1234678999876544332      3333322111          2


Q ss_pred             cccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHH-HHHhhhcchh
Q 008021          353 KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR-YVDELQGHER  431 (581)
Q Consensus       353 ~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~-~l~~~~~~~~  431 (581)
                      ...+...++.-++         ..|..|+.|+...     ++.+|.++  .-.++||||.|+.-.-+.. -+++..-...
T Consensus       320 SK~NpR~i~~mWA---------EkEmhNL~RMq~~-----GlpcP~vV--~lkkhvLVMsFiGd~~~aAPkLK~v~l~d~  383 (531)
T KOG2269|consen  320 SKQNPRGILKMWA---------EKEMHNLSRMQKH-----GLPCPQVV--KLKKHVLVMSFIGDQGLAAPKLKNVELTDD  383 (531)
T ss_pred             cccCcHHHHHHHH---------HHHHHHHHHHHhc-----CCCCCcee--eeecceEEEEeecCCCCCCccccccccChH
Confidence            2334444444332         3577788888754     56777776  6678999999984322111 0111111111


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ...........+.-++.++.-+||+|+.--|+|..        .|      ++.+||...+.+.+...-..|       +
T Consensus       384 E~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~--------~g------Kvw~IDVsQsvep~HP~~LeF-------L  442 (531)
T KOG2269|consen  384 ERRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWT--------PG------KVWVIDVSQSVEPSHPRSLEF-------L  442 (531)
T ss_pred             HHHHHHHHHHHHHHHHHHhhheeecchhhhhheec--------CC------ceEEEechhccCCCCcchhHH-------H
Confidence            12223333333434445577899999999999998        24      899999988777655433332       2


Q ss_pred             hhcHHHHHHHHHhhc
Q 008021          512 RRDGRTAAECTLRLS  526 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~  526 (581)
                      .+|...+..-+.+.|
T Consensus       443 ~RDc~Ni~~FF~r~G  457 (531)
T KOG2269|consen  443 TRDCQNIITFFTRIG  457 (531)
T ss_pred             HHHHHHHHHHHHhcC
Confidence            345555555444444

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.98  E-value=0.0028  Score=65.68  Aligned_cols=56  Identities=18%  Similarity=0.183  Sum_probs=36.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCch--hhHHHHHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG--ESIRRDFVIINLAAKI  345 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~--~~i~~Dl~il~~la~~  345 (581)
                      -+|+..|--..||+.+.... +.....++.+++|+-.++..  .....+.+++..++..
T Consensus         3 i~~l~gGltN~~y~v~~~~~-~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~   60 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDE-DALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSER   60 (302)
T ss_pred             EEEecCcccceeEEEEcCCc-ccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhC
Confidence            46788888889999986431 00011247899999777643  3456677778777653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.78  E-value=0.017  Score=61.17  Aligned_cols=40  Identities=15%  Similarity=0.273  Sum_probs=28.1

Q ss_pred             cCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCch
Q 008021          286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG  329 (581)
Q Consensus       286 ~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~  329 (581)
                      ++.-+|+..|=--++|+......    ...+..|++|+..++..
T Consensus        16 ~i~i~~l~gGlTN~~~~v~~~~~----~~~~~~~v~Ri~g~~t~   55 (330)
T PLN02421         16 DFSVERISGGITNLLLKVSVKEE----NGNEVSVTVRLFGPNTD   55 (330)
T ss_pred             ceEEEEeCCcccceEEEEEecCC----CCCCceEEEEEecCCcC
Confidence            45678998899999999976431    01134899999877643

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.74  E-value=0.0027  Score=74.89  Aligned_cols=87  Identities=17%  Similarity=0.166  Sum_probs=54.8

Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH----hhHHHHHHHH-HHHHhhc-----
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK----TDRVNLVEFF-KAVARRD-----  514 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~----~~r~~l~~l~-~Al~~~D-----  514 (581)
                      ++.+|..|++|+|+||.|++|+       .-|      ++++.|||+....-.    ...+..++-+ .-+..+.     
T Consensus       156 ~Eylh~ygivhrdlkpdnllIT-------~mG------hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTP  222 (1205)
T KOG0606|consen  156 VEYLHSYGIVHRDLKPDNLLIT-------SMG------HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTP  222 (1205)
T ss_pred             hHhhccCCeecCCCCCCcceee-------ecc------cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCc
Confidence            7889999999999999999999       677      999999998764321    1122221111 1111111     


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhh
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLP  545 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~  545 (581)
                      .+.+.+.++.-| +..++|-|+..-.+.+..
T Consensus       223 eyiaPeVilrqg-ygkpvdwwamGiIlyeFL  252 (1205)
T KOG0606|consen  223 EYIAPEVILRQG-YGKPVDWWAMGIILYEFL  252 (1205)
T ss_pred             cccChhhhhhhc-cCCCccHHHHHHHHHHHh
Confidence            344555555444 345678777777666643

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.72  E-value=0.0055  Score=64.73  Aligned_cols=35  Identities=23%  Similarity=0.371  Sum_probs=29.8

Q ss_pred             CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      ..++|+|.|+|||+++       +++      .+.+|||++++.=++.
T Consensus       198 ~~lvHGD~~~gNlii~-------~~~------~~gVlDwe~~~lGDP~  232 (321)
T COG3173         198 PVLVHGDYRPGNLIID-------PGR------PTGVLDWELATLGDPL  232 (321)
T ss_pred             ceeeeCCcccCCEEEe-------CCC------eeEEEeccccccCCcH
Confidence            5799999999999999       555      5999999999876664

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.48  E-value=0.034  Score=56.21  Aligned_cols=96  Identities=20%  Similarity=0.193  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHH
Q 008021          265 FAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK  344 (581)
Q Consensus       265 ~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~  344 (581)
                      |..+.+.+.+.+|..  ++=   +.+++.-|.+-+.|+-..     |    ..++-||+..-..                
T Consensus         2 w~~i~~qlse~~g~~--~i~---er~~v~gG~inea~~v~d-----g----~~~~FvK~n~~~~----------------   51 (286)
T COG3001           2 WQAISQQLSEQLGEG--EIK---EREEVSGGDINEAWRLRD-----G----TDPFFVKCNQREQ----------------   51 (286)
T ss_pred             hHHHHHHHHHHhCch--hhh---cccccCCccccceeEeec-----C----CcceEEEecchhh----------------
Confidence            677888888999976  331   356787787777776654     3    5899999843221                


Q ss_pred             HhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHH
Q 008021          345 ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVS  420 (581)
Q Consensus       345 ~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~  420 (581)
                                                +--|..|+..++.+.+    .+.|.+|+++..-+  +..+|||||++-.+++
T Consensus        52 --------------------------~~~f~AEa~gL~~la~----s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          52 --------------------------LSMFTAEADGLELLAR----SNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             --------------------------HHHHHHHHHHHHHHHh----cCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence                                      1225667877776643    45689999986544  3459999999876665

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=96.23  E-value=0.016  Score=54.38  Aligned_cols=98  Identities=13%  Similarity=-0.034  Sum_probs=62.7

Q ss_pred             cHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          418 CVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       418 ~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      +|.+++.....  .......++..++.+ +..+|..|      ||+||+++       .++      .+++  ||++...
T Consensus         2 sL~~~l~~~~~~l~~~~~~~i~~qi~~~-L~~lH~~~------kp~Nil~~-------~~~------~~~~--fG~~~~~   59 (176)
T smart00750        2 SLADILEVRGRPLNEEEIWAVCLQCLRA-LRELHRQA------KSGNILLT-------WDG------LLKL--DGSVAFK   59 (176)
T ss_pred             cHHHHHHHhCCCCCHHHHHHHHHHHHHH-HHHHHhcC------CcccEeEc-------Ccc------ceee--ccceEee
Confidence            56666653211  112223344444443 67788877      99999998       666      6777  9998876


Q ss_pred             CHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          496 SKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       496 ~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +....          ...-.+.+.|.+.. ..+....|.|+|+..+.+++++.
T Consensus        60 ~~~~~----------~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~  101 (176)
T smart00750       60 TPEQS----------RVDPYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYE  101 (176)
T ss_pred             ccccC----------CCcccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCC
Confidence            55321          12345667777644 44556789999999999998763

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=95.95  E-value=0.013  Score=60.13  Aligned_cols=30  Identities=23%  Similarity=0.175  Sum_probs=26.1

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG  327 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~  327 (581)
                      .++..|+.+.|++++..+        |+++++|+..|+
T Consensus         8 ~~~~~g~~s~V~pv~~~d--------G~~avLKl~~p~   37 (253)
T PF04655_consen    8 GPPAHGSSSLVVPVRRAD--------GTPAVLKLAPPH   37 (253)
T ss_pred             CCCCCCcceEEEEEEcCC--------CCeEEEEecCCc
Confidence            567889999999999865        699999998886

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=95.82  E-value=0.0044  Score=68.32  Aligned_cols=120  Identities=14%  Similarity=0.118  Sum_probs=69.6

Q ss_pred             EEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhh----CCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          408 VLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLV----DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       408 VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~----~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      .+.|++|+-.+|.+|+............+.    ....+++-.    .|.+|+|++|.||...       .+.      +
T Consensus       332 yI~Mn~c~~~tledWl~rr~~~e~~s~s~~----~~~~~q~~~~~~yk~~ihrdlkp~nif~~-------~d~------q  394 (516)
T KOG1033|consen  332 YIQMNLCEKETLEDWLRRRRTGEERSLSLM----LDIFKQIAPAVEYKGLIHRDLKPSNIFFS-------DDD------Q  394 (516)
T ss_pred             hhhhhhhhhhhHHHHhhCCCcccccchhHH----HHHHHhhccchhhccchhhhccccccccc-------cch------h
Confidence            589999999999999864221111111111    112333322    8999999999999998       555      8


Q ss_pred             EEEEecccccccCHhh--HHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          484 VIFLDVGMTAELSKTD--RVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~--r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +++.|||+++..+...  .....+-...+ ..-.|..+|.+..- .+....|..+++-.+.+|..
T Consensus       395 ~kIgDFgl~ts~~~~~~~~~~~a~~t~~~-gt~~YmsPEQi~g~-~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  395 LKIGDFGLVTSQDKDETVAPAAASHTQQV-GTLLYMSPEQIRGQ-QYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhhhhhhheeecccCCcccchhhhhhhcc-cccccCCHHHHhhh-hhhhhcchhhHHHHHHHHHH
Confidence            9999999999876655  00111111111 11123333433321 12235577777777777765

>PTZ00384 choline kinase; Provisional

Probab=95.78  E-value=0.14  Score=55.69  Aligned_cols=44  Identities=23%  Similarity=0.120  Sum_probs=31.3

Q ss_pred             CCHHHHHHHHHHHhCCChhhh-hccCCceeecccceeEEEEEEecc
Q 008021          263 HSFAYTKKTIERAFGRRLSEI-FDGFEEAPVASGSIAQVHRASLRF  307 (581)
Q Consensus       263 ~~~~~~~~~le~elG~~~~ei-F~~fd~~PIgsGSigQVyrA~l~~  307 (581)
                      +....+++++.+-.+ .|.++ -++++-+|+..|--.++|+++...
T Consensus        29 ~~~~~~~~~~~~~~p-~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~   73 (383)
T PTZ00384         29 HSHSNLKSLCIRHVP-FWNNVNPEFIEIKKMNNGITNQVYQATLVD   73 (383)
T ss_pred             ccHHHHHHHHHHHCC-ccccCCcccEEEEEeCCcccceEEEEEecC
Confidence            666778888877665 45433 234567899889999999998743

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=95.31  E-value=0.038  Score=59.30  Aligned_cols=78  Identities=14%  Similarity=0.213  Sum_probs=51.5

Q ss_pred             EEEeccCCccHHHHHHhhhcc-----hh-hHHHHHHHH--HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCC
Q 008021          409 LVETYEQGECVSRYVDELQGH-----ER-LKSALAHIG--THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS  480 (581)
Q Consensus       409 LVmEyi~G~~L~~~l~~~~~~-----~~-~~~~la~~~--i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~  480 (581)
                      ....+..-+.|..++.-..+.     +. ...++....  +...+..||.+|+||.|+-.-|-.++       +.-    
T Consensus       365 V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId-------d~L----  433 (563)
T KOG1024|consen  365 VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID-------DQL----  433 (563)
T ss_pred             EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh-------hhe----
Confidence            344555566788887633221     11 112232222  23447889999999999999999998       444    


Q ss_pred             CCeEEEEecccccccCHhh
Q 008021          481 KPHVIFLDVGMTAELSKTD  499 (581)
Q Consensus       481 ~~~lvLiDFGl~~~L~~~~  499 (581)
                        +++|.|=.+++.+=+.+
T Consensus       434 --qVkltDsaLSRDLFP~D  450 (563)
T KOG1024|consen  434 --QVKLTDSALSRDLFPGD  450 (563)
T ss_pred             --eEEeccchhccccCccc
Confidence              89999999888774443

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.27  E-value=0.015  Score=56.89  Aligned_cols=35  Identities=17%  Similarity=0.246  Sum_probs=28.7

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      ..-..|+|+||+||+++       ++       .+++|||+.++.-++.
T Consensus        76 ~~~p~H~D~~~~N~~~~-------~~-------~~~lIDwe~a~~gDp~  110 (188)
T PRK10271         76 RLAPLHMDVHAGNLVHS-------AS-------GLRLIDWEYAGDGDIA  110 (188)
T ss_pred             CeeeecCCCCCccEEEE-------CC-------CEEEEeCCcccCCCHH
Confidence            34679999999999988       44       4889999999877663

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=94.44  E-value=0.44  Score=47.40  Aligned_cols=29  Identities=21%  Similarity=0.250  Sum_probs=24.5

Q ss_pred             cCC-ceeecccce-eEEEEEEeccCCCCCCCCCeEEEEEE
Q 008021          286 GFE-EAPVASGSI-AQVHRASLRFRYPGQKVKPIVVAVKV  323 (581)
Q Consensus       286 ~fd-~~PIgsGSi-gQVyrA~l~~~~~G~~~~g~~VAVKV  323 (581)
                      +|+ .+=+|.|+- |.|+++...         |+.+|+|+
T Consensus        38 ~I~flefLg~g~~~~~V~kv~I~---------g~~YALKl   68 (207)
T PF13095_consen   38 DIEFLEFLGHGSHDGYVFKVEID---------GRIYALKL   68 (207)
T ss_pred             cEeeeeecCCCCceeEEEEEEEC---------CeEEEEEE
Confidence            344 467999999 999999985         68999999

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.15  E-value=0.089  Score=54.43  Aligned_cols=30  Identities=27%  Similarity=0.472  Sum_probs=25.6

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccc
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA  493 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~  493 (581)
                      ..+++|+|+|++||+++       . +      .+.+|||+.+.
T Consensus       186 ~~~liHgD~~~~Nil~~-------~-~------~i~lIDfd~~~  215 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLK-------D-N------EVYVIDFDYCT  215 (313)
T ss_pred             cCceEcCCCCcccEEEe-------C-C------cEEEEECcccc
Confidence            36899999999999998       4 4      68999999654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=93.46  E-value=0.26  Score=48.22  Aligned_cols=84  Identities=19%  Similarity=0.192  Sum_probs=55.8

Q ss_pred             ccccccccCCCCcEEEEeccCCcc-------HHHHHHhhhcchhhHHHHHHHHHHHHHHHhhh---CCeEecCCCCCCEE
Q 008021          395 SFPKPVYPLVHPAVLVETYEQGEC-------VSRYVDELQGHERLKSALAHIGTHALLKMLLV---DNFIHADMHPGNIL  464 (581)
Q Consensus       395 ~vP~~~~~l~t~~VLVmEyi~G~~-------L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~---~G~~H~DlHPGNIL  464 (581)
                      .+|+.+. .| .+..|.||+..++       +.++..   ..-..+..+|-.+++. ++.+..   ..|.-+|.+|+|+-
T Consensus        21 ~~pk~lG-~C-G~~~v~E~~~~~~~~~~~~~l~~~~~---~~w~~R~~iA~~lL~~-l~~l~~~~~~~~~lcDv~~~nfg   94 (188)
T PF12260_consen   21 PFPKLLG-SC-GRFYVVEYVGAGSLYGIYRPLSQFLQ---SPWEQRAKIALQLLEL-LEELDHGPLGFFYLCDVSPDNFG   94 (188)
T ss_pred             CCCCeee-EC-CCEEEEEeecCccccccccccccccc---cCHHHHHHHHHHHHHH-HHHHhcCCCCcEEEeecchHHeE
Confidence            6788762 33 5578999998664       344432   2223345566555554 333433   45777999999999


Q ss_pred             EeecccccccccccCCCCeEEEEecccccccCH
Q 008021          465 VRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       465 V~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      |.       .+|      +++++|...+...+.
T Consensus        95 v~-------~~~------~lk~iDld~v~~~~~  114 (188)
T PF12260_consen   95 VN-------DDG------RLKLIDLDDVFVEDK  114 (188)
T ss_pred             Ee-------CCC------cEEEEechhcchhHH
Confidence            99       777      899999998776543

Proteins in this uncharacterised family are described as transmembrane proteins.

>PTZ00296 choline kinase; Provisional

Probab=93.18  E-value=1.6  Score=48.37  Aligned_cols=80  Identities=15%  Similarity=0.069  Sum_probs=43.9

Q ss_pred             HHHHHhhhcC-CCCCCHHHHHHHHHHHhCCChhhh-hccCCceeecccceeEEEEEEeccCCC-CCCCCCeEEEEEEecC
Q 008021          250 CKKLSELHSK-APEHSFAYTKKTIERAFGRRLSEI-FDGFEEAPVASGSIAQVHRASLRFRYP-GQKVKPIVVAVKVRHP  326 (581)
Q Consensus       250 ~~~L~~Lqd~-~pp~~~~~~~~~le~elG~~~~ei-F~~fd~~PIgsGSigQVyrA~l~~~~~-G~~~~g~~VAVKV~~P  326 (581)
                      .++|..+-.. .+-...+.++.++.+..+ .|..+ -++++-+||..|=--++|+.+.....+ .....++.|++++..+
T Consensus        70 ~~~l~~~~~~~~~~~~~~~~~~i~~~~vp-~W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~  148 (442)
T PTZ00296         70 KNDIPLCAQEFSDLTDPLYIKKICLEKVP-EWRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGK  148 (442)
T ss_pred             hhhhhHHHHhhcccCChHHHHHHHHHHCC-ccccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCC
Confidence            3344444444 333344455555554433 23211 124567899889999999998753100 0001247899999777


Q ss_pred             Cchh
Q 008021          327 GVGE  330 (581)
Q Consensus       327 ~v~~  330 (581)
                      +...
T Consensus       149 ~te~  152 (442)
T PTZ00296        149 DVDE  152 (442)
T ss_pred             Cccc
Confidence            6543

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=91.47  E-value=0.1  Score=51.32  Aligned_cols=33  Identities=30%  Similarity=0.513  Sum_probs=21.6

Q ss_pred             CCeEecCCCCCCEEE-eecccccccccccCCCCeEEEEecccccccC
Q 008021          451 DNFIHADMHPGNILV-RVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       451 ~G~~H~DlHPGNILV-~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      ..+.|.|++|||||+ .       .++      ++.||||--++.-+
T Consensus       143 ~v~cHnDl~~~Nil~~~-------~~~------~~~lIDfEya~~n~  176 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINN-------KDG------EVKLIDFEYAGYND  176 (211)
T ss_dssp             EEEE-S--SGGGEEETS-------SSS------CEEE--GTT-EEEE
T ss_pred             ceEeeccCccccEEecc-------CCC------eEEEecHHHHhhcc
Confidence            579999999999999 4       455      89999998877543

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=90.96  E-value=0.19  Score=49.20  Aligned_cols=41  Identities=17%  Similarity=0.290  Sum_probs=29.5

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      ...++|+|++++|||+..++     +|   ....+.++||..++.-++.
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~-----~~---~~~~~~liDfq~~~~g~p~  159 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDD-----EG---KPEDVALIDFQLSHYGSPA  159 (196)
T ss_pred             ceEEeeCCCCccceeeccCC-----CC---CccceEEEecccCCcCChH
Confidence            35799999999999998211     11   0115899999998876653

subfamily of choline kinases

>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]

Probab=90.88  E-value=4.2  Score=43.74  Aligned_cols=80  Identities=11%  Similarity=0.149  Sum_probs=49.3

Q ss_pred             CHHHHHHHHHHHhCCChhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCch-hhHHHHHHHHHH
Q 008021          264 SFAYTKKTIERAFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG-ESIRRDFVIINL  341 (581)
Q Consensus       264 ~~~~~~~~le~elG~~~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~-~~i~~Dl~il~~  341 (581)
                      ....+...+.+.+|..|.++-.+.. -+.++-|+-+-.+.++......-.....++|.+.|-.+++. .....|+.++..
T Consensus        19 ~~~~~~~~~~~~l~~~w~~v~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~~~~~~~Esv~fa~   98 (366)
T KOG2686|consen   19 ILPRAKELCAQYLGGAWRDVINEEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVDFSQRETESVMFAI   98 (366)
T ss_pred             ccHHHHHHHHHHhhhHHhhhhhhhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCccHHHhhhHHHHHHH
Confidence            3445566666777777777665533 56777777777888877543111111245799999888873 445556666665


Q ss_pred             HH
Q 008021          342 AA  343 (581)
Q Consensus       342 la  343 (581)
                      ++
T Consensus        99 lS  100 (366)
T KOG2686|consen   99 LS  100 (366)
T ss_pred             Hh
Confidence            54

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=89.55  E-value=0.23  Score=51.28  Aligned_cols=32  Identities=25%  Similarity=0.417  Sum_probs=26.7

Q ss_pred             CeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          452 NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       452 G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      -++|+|++|+|++.+       +.|      ++.||||--++-=+
T Consensus       154 v~cH~Dl~~~N~l~t-------~~~------~l~LIDWEyAg~~D  185 (269)
T COG0510         154 VPCHNDLNPGNLLLT-------DKG------GLFLIDWEYAGLND  185 (269)
T ss_pred             eeecCCCCccceEEc-------CCC------cEEEEecccCCCcc
Confidence            599999999999998       556      89999997666433

>COG4857 Predicted kinase [General function prediction only]

Probab=89.51  E-value=2.6  Score=44.03  Aligned_cols=53  Identities=19%  Similarity=0.414  Sum_probs=40.6

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEe--cccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD--VGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiD--FGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      ..-.+|+|+|.|.|+++       +.       ..++||  |..++.+.=+.-.-+..+|..+..+++.
T Consensus       227 aetLiHGDLHsGSIfvt-------e~-------etkvIDPEFaFYGPmafDiG~~iaNl~~~~~s~~g~  281 (408)
T COG4857         227 AETLIHGDLHSGSIFVT-------EK-------ETKVIDPEFAFYGPMAFDIGMLIANLWMSLFSQKGF  281 (408)
T ss_pred             hHHHhccccccCcEEee-------cC-------cceeeCccccccCcchhhHHHHHHHHHHHHHhhhch
Confidence            35678999999999998       44       477887  6677777666667777888888777664

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=88.92  E-value=1.4  Score=45.97  Aligned_cols=32  Identities=13%  Similarity=0.233  Sum_probs=27.2

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE  494 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~  494 (581)
                      ..|++|+|++++|++++       .++      .+.+|||-.+..
T Consensus       195 ~~~lcHgD~~~~Nvl~~-------~~~------~~~iIDfd~~~~  226 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYD-------ETR------GGYFINFEKASF  226 (309)
T ss_pred             ceeeeCCCCcHHhEEEc-------CCC------CEEEEEhhhccc
Confidence            35899999999999998       566      799999987664

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=88.63  E-value=0.5  Score=53.07  Aligned_cols=84  Identities=18%  Similarity=0.239  Sum_probs=51.7

Q ss_pred             ccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHH--HH----HHHHhhhCCeEecCCCCCCEEEeeccccccc
Q 008021          401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGT--HA----LLKMLLVDNFIHADMHPGNILVRVAQKKSSQ  474 (581)
Q Consensus       401 ~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i--~a----~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~  474 (581)
                      |+-.....+-.|++ |.++..+.......... ..+-....  ..    .+.++|..+++|-|++|.||+..       .
T Consensus       187 ~e~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~-~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~-------~  257 (524)
T KOG0601|consen  187 WEGSGILFIQTELC-GESLQSYCHTPCNFLPD-NLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT-------S  257 (524)
T ss_pred             cccCCcceeeeccc-cchhHHhhhcccccCCc-hhhhhHHhhhhhcccccccccCCCcccccccchhheecc-------c
Confidence            33444556666666 56677665432211111 11111111  11    36788999999999999999998       4


Q ss_pred             c-cccCCCCeEEEEecccccccCHhh
Q 008021          475 K-RLFRSKPHVIFLDVGMTAELSKTD  499 (581)
Q Consensus       475 ~-g~~~~~~~lvLiDFGl~~~L~~~~  499 (581)
                      + .      ...+.|||++..+.+..
T Consensus       258 ~~~------s~~~~df~~v~~i~~~~  277 (524)
T KOG0601|consen  258 DWT------SCKLTDFGLVSKISDGN  277 (524)
T ss_pred             ccc------eeecCCcceeEEccCCc
Confidence            4 3      67788888888776654

>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=88.62  E-value=0.97  Score=45.20  Aligned_cols=81  Identities=17%  Similarity=0.116  Sum_probs=50.0

Q ss_pred             ecCCCCCCEEEeeccccccc-ccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCC
Q 008021          455 HADMHPGNILVRVAQKKSSQ-KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPN  533 (581)
Q Consensus       455 H~DlHPGNILV~~~~~~~~~-~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D  533 (581)
                      =+|=||+|||++       . +|      ++.-+|||.+-.-.+..                            ..+..-
T Consensus       132 lgDRh~~NIli~-------~~~G------~~~hIDfg~~~~~~~~~----------------------------~~~e~v  170 (219)
T cd00142         132 IGDRHPDNIMID-------LDTG------KLFHIDFGFIFGKRKKF----------------------------LGRERV  170 (219)
T ss_pred             cCCCCCccEEEE-------CCCC------eEEEEeeHHhhCcCcCC----------------------------CCCCCC
Confidence            379999999999       4 78      99999999764322110                            001122


Q ss_pred             HHHHHHHHHHhhhHhhccccHHHHHHHHHHHHHHh-hHHHHHHH
Q 008021          534 PKAFIEWMRLLPSGVLRRVIWSILLSACSNYLRKF-GVIESMLM  576 (581)
Q Consensus       534 ~~~f~~~l~~l~~~~~~~~~~~~ll~~~~~~lr~~-~~~~~~~~  576 (581)
                      |-.+..+|.+.+.+.-........+.+....+|++ ..+.+++.
T Consensus       171 PFRLT~~~~~~~g~~~~~g~F~~~~~~~~~~lr~~~~~i~~ll~  214 (219)
T cd00142         171 PFRLTPDLVNALGTGGVFGPFRSLCVKAMLILRRHAGLLLNLLS  214 (219)
T ss_pred             CEeccHHHHHHhCCcchhhhHHHHHHHHHHHHHhChHHHHHHHH
Confidence            34456666666555433345666777777888887 44444443

Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the

>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=88.45  E-value=1.1  Score=45.58  Aligned_cols=74  Identities=18%  Similarity=0.082  Sum_probs=46.7

Q ss_pred             cCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHH
Q 008021          456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPK  535 (581)
Q Consensus       456 ~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~  535 (581)
                      +|=||+|||++.      .+|      +++-+|||.+-.-+..                          +.  .+.+-|-
T Consensus       144 gDRh~~NIli~~------~tG------~~~HIDfg~~~~~~~~--------------------------~~--~pe~vPF  183 (237)
T cd00892         144 GDRHGENILFDS------NTG------DVVHVDFNCLFDKGET--------------------------LE--VPERVPF  183 (237)
T ss_pred             CCCCcccEEEEc------CCC------cEEEEehHhhhccccc--------------------------CC--CCCCCCc
Confidence            799999999991      377      9999999976432110                          00  1112233


Q ss_pred             HHHHHHHHhhhHhhccccHHHHHHHHHHHHHHhh
Q 008021          536 AFIEWMRLLPSGVLRRVIWSILLSACSNYLRKFG  569 (581)
Q Consensus       536 ~f~~~l~~l~~~~~~~~~~~~ll~~~~~~lr~~~  569 (581)
                      .+..+|.+.+.+.-....+...+....+.+|++.
T Consensus       184 RLT~~~~~~lg~~g~~g~F~~~~~~~~~~Lr~~~  217 (237)
T cd00892         184 RLTQNMVDAMGVLGVEGLFRKSCEVTLRLLRSNK  217 (237)
T ss_pred             ccCHHHHHHhCCCCCCCchHHHHHHHHHHHHhCH
Confidence            4555666655554444566677777777888773

ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central

>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain

Probab=88.33  E-value=1  Score=44.50  Aligned_cols=29  Identities=24%  Similarity=0.391  Sum_probs=24.2

Q ss_pred             EecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          454 IHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       454 ~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      -=+|-||+|||++       .+|      ++.=+|||.+-.-
T Consensus       104 glgDRh~~NIli~-------~~G------~v~hIDfg~~~~~  132 (202)
T smart00146      104 GLGDRHNDNIMLD-------KTG------HLFHIDFGFILGN  132 (202)
T ss_pred             cCCCCCCCcEEEe-------CCC------CEEEEechhhhCc
Confidence            3479999999999       678      9999999986543

Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=87.98  E-value=1.2  Score=48.27  Aligned_cols=30  Identities=23%  Similarity=0.390  Sum_probs=26.2

Q ss_pred             CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc
Q 008021          451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE  494 (581)
Q Consensus       451 ~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~  494 (581)
                      .-|=|+|+|-+||+++        .|      +|.||||-+++-
T Consensus       341 f~fehrnlt~~niLId--------~G------nvtLIDfklsRl  370 (488)
T COG5072         341 FPFEHRNLTLDNILID--------EG------NVTLIDFKLSRL  370 (488)
T ss_pred             CCcccccccccceeee--------cC------ceEEEEeeeeec
Confidence            4688999999999998        45      899999999873

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=87.97  E-value=0.06  Score=61.83  Aligned_cols=129  Identities=13%  Similarity=0.094  Sum_probs=74.2

Q ss_pred             CCCcEEEEeccCCccHHHHH-Hhhh-cch-hhHHHHHHHHHHHHHHHhh-hCCeEecCCCCCCEEEeecccccccccccC
Q 008021          404 VHPAVLVETYEQGECVSRYV-DELQ-GHE-RLKSALAHIGTHALLKMLL-VDNFIHADMHPGNILVRVAQKKSSQKRLFR  479 (581)
Q Consensus       404 ~t~~VLVmEyi~G~~L~~~l-~~~~-~~~-~~~~~la~~~i~a~l~~L~-~~G~~H~DlHPGNILV~~~~~~~~~~g~~~  479 (581)
                      ....++.+||.+|..+.+.+ .... +.. ......-... ..-+..+| ..|+.|+|++|.|.+++       ..+   
T Consensus        93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql-~s~l~~~H~~~~~~h~~ikP~n~~l~-------~s~---  161 (601)
T KOG0590|consen   93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQL-NSGLSYLHPENGVTHRDIKPSNSLLD-------ESG---  161 (601)
T ss_pred             CcccccccCcccccccccccccCCccCCCCcchhhhhhhh-ccCccccCcccccccCCCCCccchhc-------cCC---
Confidence            34557999999999887765 2211 111 1111111111 12256677 88999999999999998       222   


Q ss_pred             CCCeEEEEecccccccCH-hhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          480 SKPHVIFLDVGMTAELSK-TDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       480 ~~~~lvLiDFGl~~~L~~-~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       . .+++.|||+++.... ......+..-..  ..-.+.+.|...+.+...++.|.+.-...+..+..+
T Consensus       162 -~-~l~~~df~~At~~~~~~g~~~~~~~~~g--~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g  226 (601)
T KOG0590|consen  162 -S-ALKIADFGLATAYRNKNGAERSLKDRCG--SSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTG  226 (601)
T ss_pred             -C-cccCCCchhhccccccCCcceeeecccC--CCCCCCCcccccchhhcCCCcccccccccccccccC
Confidence             0 589999999998766 333222211111  122445555555545555666776655555544433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	581
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.4 bits (161), Expect = 2e-11
 Identities = 80/599 (13%), Positives = 156/599 (26%), Gaps = 194/599 (32%)

Query: 2   SRVLTFRNIWR-----AAQSVLTNERGYHSELTKYG-------AVVAVGLRVPYYRFYSH 49
           ++V    N+ R       +  L   R     +   G        V         Y+    
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRP-AKNVLIDGVLGSGKTWVALDVCL--SYKVQCK 179

Query: 50  YGFP----SGGHCSVPVYNVKQL--LCRSCSVRSLSVASASS---VATHQAQIAWKRLFY 100
             F     +  +C+ P   ++ L  L         S +  SS   +  H  Q   +RL  
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 101 YSSFR------DQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYF 154
              +         +    ++   AF+L      +L+      T+        +SA T   
Sbjct: 240 SKPYENCLLVLLNV--QNAKAWNAFNL---SCKILL------TTRFKQVTDFLSAATTT- 287

Query: 155 PSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFS--PSIMMA--PFADS-FG 209
                        H  +     +L    +  +   YL       P  ++   P   S   
Sbjct: 288 -------------HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
              R+             G A   W  W            C KL+               
Sbjct: 335 ESIRD-------------GLA--TWDNW--------KHVNCDKLT--------------- 356

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
             IE                      S+  +  A  R  +                    
Sbjct: 357 TIIES---------------------SLNVLEPAEYRKMF-------------------- 375

Query: 330 ESIRRDFVIINLAAKISSVIPAVKWLRLDES-VQQFAVFMMSQVDLAREAAHLSRFIYNF 388
                   +   +A I +++ ++ W  + +S V      +     + ++    +  I + 
Sbjct: 376 ----DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL-----AHIGTH- 442
               ++         +H   +V+ Y   +            + +   L     +HIG H 
Sbjct: 432 YL--ELKVKLENEYALH-RSIVDHYNIPKT-------FDSDDLIPPYLDQYFYSHIGHHL 481

Query: 443 ---------ALLKMLLVD-NFI--------HADMHPGNILVRVAQKKSSQKRLFRSKPHV 484
                     L +M+ +D  F+         A    G+IL  + Q K  +  +  + P  
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPK- 540

Query: 485 IFLDVGMTAELSKTDRVN-LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMR 542
                           VN +++F   +      +     LR++      +   F E  +
Sbjct: 541 ------------YERLVNAILDFLPKIEENLICSKYTDLLRIALMA--EDEAIFEEAHK 585

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 48/335 (14%), Positives = 102/335 (30%), Gaps = 104/335 (31%)

Query: 315 KPIVVAVKVRH----PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS 370
           K I+   ++ H            R F    L +K   ++       ++E ++    F+MS
Sbjct: 43  KSILSKEEIDHIIMSKDAVSGTLRLFWT--LLSKQEEMVQKF----VEEVLRINYKFLMS 96

Query: 371 QVDLAREAAHLSRFIYNFRR---WKDVS-FPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
            +   +    +   +Y  +R   + D   F K  Y +       + Y +   + + + EL
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK--YNVSRL----QPYLK---LRQALLEL 147

Query: 427 QGHERL---------KSALA--------------------HIG----THALLKML----- 448
           +  + +         K+ +A                    ++        +L+ML     
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207

Query: 449 -LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFL---------------DVG-- 490
            +  N+     H  NI +R+   ++  +RL +SKP+   L               ++   
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK 267

Query: 491 ---MTAELSKTDRVNLVEF--FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLP 545
               T     TD ++                T  E    L            ++++   P
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE-VKSL-----------LLKYLDCRP 315

Query: 546 SGVLRRVIWSILLSACSNYLRKFGVIESMLMEMFA 580
              L R          +   R+  +I   + +  A
Sbjct: 316 QD-LPR-------EVLTTNPRRLSIIAESIRDGLA 342

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	581
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.92
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.85
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.84
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.83
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.82
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.82
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.81
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.81
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.81
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.8
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.79
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.79
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.79
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.78
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.78
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.78
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.78
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.77
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.77
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.76
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.76
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.75
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.73
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.72
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.71
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.71
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.71
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.71
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.7
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.69
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.69
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.69
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.68
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.68
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.67
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.67
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.66
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.66
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.66
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.66
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.66
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.66
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.66
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.65
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.65
3niz_A	311	Rhodanese family protein; structural genomics, str	99.65
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.65
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.65
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.65
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.65
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.65
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.65
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.64
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.64
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.64
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.64
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.64
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.64
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.64
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.64
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.64
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.64
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.64
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.64
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.64
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.63
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.63
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.63
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.63
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.63
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.63
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.63
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.63
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.63
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.63
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.63
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.63
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.63
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.63
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.62
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.62
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.62
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.62
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.62
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.62
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.62
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.62
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.62
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.62
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.62
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.62
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.62
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.62
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.62
3uqc_A	286	Probable conserved transmembrane protein; structur	99.62
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.61
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.61
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.61
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.61
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.61
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.61
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.61
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.61
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.61
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.61
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.61
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.61
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.61
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.6
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.6
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.6
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.6
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.6
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.6
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.6
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.6
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.6
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.6
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.6
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.6
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.6
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.59
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.59
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.59
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.59
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.59
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.59
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.59
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.59
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.59
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.59
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.59
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.59
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.59
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.59
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.59
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.59
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.58
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.58
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.58
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.58
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.58
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.58
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.58
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.58
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.58
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.58
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.58
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.58
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.58
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.58
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.58
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.58
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.58
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.58
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.58
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.57
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.57
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.57
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.57
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.57
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.57
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.57
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.57
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.57
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.57
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.57
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.57
3bhy_A	283	Death-associated protein kinase 3; death associate	99.57
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.57
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.57
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.56
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.56
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.56
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.56
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.56
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.56
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.56
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.56
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.56
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.56
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.56
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.56
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.56
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.56
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.56
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.55
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.55
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.55
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.55
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.55
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.55
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.55
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.55
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.55
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.55
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.54
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.54
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.54
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.54
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.54
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.54
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.54
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.54
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.54
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.54
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.54
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.54
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.53
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.53
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.53
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.53
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.53
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.53
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.53
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.53
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.53
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.53
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.52
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.52
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.52
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.52
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.52
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.52
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.52
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.52
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.51
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.51
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.51
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.51
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.51
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.51
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.5
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.5
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.5
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.5
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.49
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.49
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.49
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.49
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.49
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.49
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.49
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.48
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.48
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.47
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.47
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.46
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.46
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.45
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.45
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.45
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.42
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.4
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.36
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.3
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.2
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.99
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.95
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.94
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.75
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.74
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.68
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.67
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.52
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.51
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.42
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.4
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.31
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	98.24
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.21
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	98.2
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	98.17
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	98.08
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	98.08
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.93
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.8
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.79
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	97.38
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.94
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.88
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.38
3ls8_A	614	Phosphatidylinositol 3-kinase catalytic subunit ty	85.04
2x6h_A	696	GH13170P, VPS34, phosphotidylinositol 3 kinase 59F	84.99

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.92  E-value=9.1e-26  Score=237.53  Aligned_cols=269  Identities=14%  Similarity=0.109  Sum_probs=146.0

Q ss_pred             HHHHHHHHHhcChHHH-HHHHHHhcCCCCCCHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCc-----e
Q 008021          217 LHVVLRTLETAGPAFI-KWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEE-----A  290 (581)
Q Consensus       217 ~~~l~~~le~lGp~fI-KlGQ~lstr~dllP~e~~~~L~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~-----~  290 (581)
                      ++++.+.+..+|+.++ +++|.+...++..+ +++.++++|+|.+|+.+++.+.+.++.+++.+..+.|..|+.     +
T Consensus        22 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~  100 (365)
T 2y7j_A           22 ARREIRHLPNLNREQRRAFIRSLRDDPSQSA-NLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKD  100 (365)
T ss_dssp             -------------------------------------------------------------CBCHHHHHHHHHHHEEEEE
T ss_pred             HHHHHhcCccchhcccccccccccCCCchhH-HHHHHHHhhhhcCCCCccccccccCCchhhcccchhhhhhhhhcccce
Confidence            4567778888999998 88998888887754 566789999999999999999999999999998888877765     8


Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      +||+|++|+||+|+++.+       |+.||||+++++.......|.                         +++...+.+
T Consensus       101 ~lg~G~~g~Vy~a~~~~~-------g~~vavK~~~~~~~~~~~~~~-------------------------~~~~~~~~~  148 (365)
T 2y7j_A          101 VIGRGVSSVVRRCVHRAT-------GHEFAVKIMEVTAERLSPEQL-------------------------EEVREATRR  148 (365)
T ss_dssp             EEEECSSEEEEEEEETTT-------CCEEEEEEEETTSSCCCHHHH-------------------------HHHHHHHHH
T ss_pred             EEecCCCEEEEEEEECCC-------CcEEEEEEEEccccccCHHHH-------------------------HHHHHHHHH
Confidence            999999999999999764       799999999987543322222                         222233334


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHHhh
Q 008021          371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKMLL  449 (581)
Q Consensus       371 ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~L~  449 (581)
                      |+++      +.++    .+++++..+..++...+..+|||||++|.+|.+++..... .......++..++.+ +..||
T Consensus       149 E~~~------l~~l----~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~-L~~LH  217 (365)
T 2y7j_A          149 ETHI------LRQV----AGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEA-VSFLH  217 (365)
T ss_dssp             HHHH------HHHH----TTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHH-HHHHH
T ss_pred             HHHH------HHHh----cCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHH
Confidence            4443      3332    2355666665666667788999999999999999865321 122223444444444 78899


Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh----
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL----  525 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l----  525 (581)
                      ..|++|+||||+||+++       .+|      +++|+|||++..+++.....      .......+.++|.+...    
T Consensus       218 ~~gi~H~Dlkp~NIl~~-------~~~------~ikl~DfG~~~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~  278 (365)
T 2y7j_A          218 ANNIVHRDLKPENILLD-------DNM------QIRLSDFGFSCHLEPGEKLR------ELCGTPGYLAPEILKCSMDET  278 (365)
T ss_dssp             HTTEECSCCSGGGEEEC-------TTC------CEEECCCTTCEECCTTCCBC------CCCSCGGGCCHHHHHHTTCTT
T ss_pred             hCCeecCCCCHHHEEEC-------CCC------CEEEEecCcccccCCCcccc------cCCCCCCccChhhcccccccc
Confidence            99999999999999998       677      89999999998876543211      01122345667766532    


Q ss_pred             -cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          526 -SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       526 -~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                       .......|.++|+..+.+++.+.
T Consensus       279 ~~~~~~~~Di~slG~il~ell~g~  302 (365)
T 2y7j_A          279 HPGYGKEVDLWACGVILFTLLAGS  302 (365)
T ss_dssp             SCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             CcCCCchhhHHhHHHHHHHHHHCC
Confidence             12345679999999999998873

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.85  E-value=5e-22  Score=209.43  Aligned_cols=199  Identities=15%  Similarity=0.056  Sum_probs=129.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+..-..                           .+..       
T Consensus        29 ~~~lG~G~fg~V~~a~~~~~-------~~~vAiK~i~~~~~~---------------------------~~~~-------   67 (350)
T 4b9d_A           29 LQKIGEGSFGKAILVKSTED-------GRQYVIKEINISRMS---------------------------SKER-------   67 (350)
T ss_dssp             EEEC------CEEEEEETTT-------CCEEEEEEEECTTSC---------------------------HHHH-------
T ss_pred             eEEEecCCCeEEEEEEECCC-------CCEEEEEEEehHHCC---------------------------HHHH-------
Confidence            47899999999999999875       799999998654110                           0000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a  443 (581)
                         -.+.+|++.+.++.     +++|.  +.+.-+  ...-+|||||++|++|.+++......   ......+...++.+
T Consensus        68 ---~~~~~E~~il~~l~-----HpnIV--~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~a  137 (350)
T 4b9d_A           68 ---EESRREVAVLANMK-----HPNIV--QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA  137 (350)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTTBC--CEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHCC-----CCCCC--cEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence               12456666665542     33322  223222  23457999999999999998653221   11122344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..+|..||+||||||+|||++       .+|      .++|+|||+++.+......     ....+-.-.|.++|.+.
T Consensus       138 -L~ylH~~~IiHRDlKp~NILl~-------~~g------~vKl~DFGla~~~~~~~~~-----~~~~~GT~~YmAPE~l~  198 (350)
T 4b9d_A          138 -LKHVHDRKILHRDIKSQNIFLT-------KDG------TVQLGDFGIARVLNSTVEL-----ARACIGTPYYLSPEICE  198 (350)
T ss_dssp             -HHHHHHTTCEETTCCGGGEEEC-------TTC------CEEECSTTEESCCCHHHHH-----HHHHHSCCTTCCHHHHT
T ss_pred             -HHHHHHCCeeeccCCHHHEEEC-------CCC------CEEEcccccceeecCCccc-----ccccCCCccccCHHHHC
Confidence             8889999999999999999998       777      8999999999988765322     12233445677888775


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILL  558 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll  558 (581)
                      . ..+....|.|++++.+.+++.+.  +...+..+++
T Consensus       199 ~-~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~  234 (350)
T 4b9d_A          199 N-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV  234 (350)
T ss_dssp             T-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             C-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence            4 33455779999999999999873  4444444443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.84  E-value=7.8e-22  Score=219.33  Aligned_cols=247  Identities=15%  Similarity=0.078  Sum_probs=162.6

Q ss_pred             HHHHHhcCCCCCCH----HHHHHHH---------------------hhhcCCCCCCHHHHHHH----HHHHhCCChhhhh
Q 008021          234 WGQWAATRPDLFPR----DLCKKLS---------------------ELHSKAPEHSFAYTKKT----IERAFGRRLSEIF  284 (581)
Q Consensus       234 lGQ~lstr~dllP~----e~~~~L~---------------------~Lqd~~pp~~~~~~~~~----le~elG~~~~eiF  284 (581)
                      +||+++|++|++|+    +..++++                     +++|++|+.+++.+.++    .+..++..+++++
T Consensus        72 ~~~f~~t~~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v~~~~~~~l~~~~~~~~~  151 (543)
T 3c4z_A           72 FQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVL  151 (543)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHHHCC---CTTHHHHHHHH
T ss_pred             HHHHHhcCCchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhhhcCCCchhhHHHHHHHH
Confidence            38899999999999    8888888                     88999999998887776    3333333333333


Q ss_pred             ccCCc----------------------------------eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchh
Q 008021          285 DGFEE----------------------------------APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE  330 (581)
Q Consensus       285 ~~fd~----------------------------------~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~  330 (581)
                      ..+++                                  +.||+|++|+||+|+.+.+       |+.||||+.......
T Consensus       152 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~t-------g~~vAiK~l~k~~~~  224 (543)
T 3c4z_A          152 AHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKAT-------GKLYACKKLNKKRLK  224 (543)
T ss_dssp             HHHTTHHHHHHHTSHHHHHHHHHHHHHTSCCCGGGEEEEEEEEECSSSEEEEEEETTT-------CCEEEEEEEEHHHHH
T ss_pred             HhhhcCchHhhhhhhhhhhhhhhhhhhcccCChhheEEEEEEeeCCCeEEEEEEECCC-------CcEEEEEEEEhHHhh
Confidence            33333                                  4599999999999999875       799999986532100


Q ss_pred             hHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEE
Q 008021          331 SIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLV  410 (581)
Q Consensus       331 ~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLV  410 (581)
                                                          .....-.+.+|.+.+.++     .++.+.-...+.......+||
T Consensus       225 ------------------------------------~~~~~~~~~~E~~iL~~l-----~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          225 ------------------------------------KRKGYQGAMVEKKILAKV-----HSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             ------------------------------------HTTCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEE
T ss_pred             ------------------------------------hhHHHHHHHHHHHHHHhc-----CCCCEeeEEEEEeeCCEEEEE
Confidence                                                000012344566655544     233332222222233456899


Q ss_pred             EeccCCccHHHHHHhhh-----cchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEE
Q 008021          411 ETYEQGECVSRYVDELQ-----GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVI  485 (581)
Q Consensus       411 mEyi~G~~L~~~l~~~~-----~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lv  485 (581)
                      |||++|++|.+++....     -.......++..++.+ +..||..|++|+||||+|||++       .+|      .++
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~a-L~~LH~~gIvHrDLKP~NILl~-------~~g------~vk  329 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG-LEHLHQRNIIYRDLKPENVLLD-------DDG------NVR  329 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEEC-------TTS------CEE
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHH-HHHHHHcCCcccCCChHHEEEe-------CCC------CEE
Confidence            99999999999886432     1111122334444433 8889999999999999999998       777      899


Q ss_pred             EEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          486 FLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       486 LiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      |+|||++..+.......     ....-.-.+.++|.+.. ..+....|.|+++..+.+++.+.
T Consensus       330 L~DFGla~~~~~~~~~~-----~~~~GT~~Y~APE~l~~-~~~~~~~DiwSlGvilyelltG~  386 (543)
T 3c4z_A          330 ISDLGLAVELKAGQTKT-----KGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAAR  386 (543)
T ss_dssp             ECCCTTCEECCTTCCCB-----CCCCSCTTTSCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             EeecceeeeccCCCccc-----ccccCCccccChhhhcC-CCCChHHhcCcchHHHHHHHhCC
Confidence            99999998775432110     00011224567777654 34455679999999999998873

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.83  E-value=1.6e-20  Score=191.77  Aligned_cols=201  Identities=14%  Similarity=0.114  Sum_probs=122.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+.+......                          .+         
T Consensus        18 ~~~lG~G~fg~V~~~~~~~~-------~~~vAiK~i~~~~~~~--------------------------~~---------   55 (275)
T 3hyh_A           18 VKTLGEGSFGKVKLAYHTTT-------GQKVALKIINKKVLAK--------------------------SD---------   55 (275)
T ss_dssp             EEEEEC---CCEEEEECTTT-------CCEEEEEEEECC-----------------------------------------
T ss_pred             EEEEecCcCeEEEEEEECCC-------CCEEEEEEEeHHHcCC--------------------------HH---------
Confidence            57899999999999999875       7999999987542100                          00         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                       .+-.+.+|.+.+.++.     +++|  .+.+.-  ....-++||||++ ++|.+++..... .......+...++.+ +
T Consensus        56 -~~~~~~~Ei~il~~l~-----HpnI--v~~~~~~~~~~~~~ivmEy~~-g~L~~~l~~~~~l~e~~~~~~~~qi~~a-l  125 (275)
T 3hyh_A           56 -MQGRIEREISYLRLLR-----HPHI--IKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISA-V  125 (275)
T ss_dssp             -CHHHHHHHHHHHHHCC-----CTTB--CCEEEEEECSSEEEEEEECCC-EEHHHHHHHSCSCCHHHHHHHHHHHHHH-H
T ss_pred             -HHHHHHHHHHHHHHCC-----CCCC--CeEEEEEEECCEEEEEEeCCC-CCHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence             0112445665555442     3332  222222  2334579999995 577777754221 122223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.+|.+|++|||+||+|||++       .+|      .++|+|||+++..++.....      ...-.-.+.++|.+..-
T Consensus       126 ~ylH~~~IiHRDiKP~NILl~-------~~~------~vkl~DFGla~~~~~~~~~~------~~~GT~~Y~APE~~~~~  186 (275)
T 3hyh_A          126 EYCHRHKIVHRDLKPENLLLD-------EHL------NVKIADFGLSNIMTDGNFLK------TSCGSPNYAAPEVISGK  186 (275)
T ss_dssp             HHHHHTTCCCCCCCTTTEEEC-------TTC------CEEECCSSCC---------------------CTTSCHHHHSSS
T ss_pred             HHHHHCCcccccCChHHeEEC-------CCC------CEEEeecCCCeecCCCCccC------CeeECcccCChhhhcCC
Confidence            889999999999999999998       677      89999999998776543221      12334567788887654


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSA  560 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~  560 (581)
                      .......|.|+++..+.+++++.  +...+..+++..
T Consensus       187 ~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~  223 (275)
T 3hyh_A          187 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN  223 (275)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            44445679999999999999883  444445554443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.82  E-value=1.4e-20  Score=197.99  Aligned_cols=193  Identities=19%  Similarity=0.161  Sum_probs=127.7

Q ss_pred             hhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          281 SEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       281 ~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      .+.|+.+  +.||+|+||.||+|+.+.+       |+.||||+....-...                          .  
T Consensus        73 ~~~y~~~--~~iG~G~fG~V~~a~~~~t-------g~~vAiK~i~~~~~~~--------------------------~--  115 (346)
T 4fih_A           73 RSYLDNF--IKIGEGSTGIVCIATVRSS-------GKLVAVKKMDLRKQQR--------------------------R--  115 (346)
T ss_dssp             GGTEEEE--EEEEECSSCEEEEEEETTT-------CCEEEEEEEEGGGCSS--------------------------G--
T ss_pred             hHhcEEe--EEeecCcCeEEEEEEECCC-------CCEEEEEEEecCchhH--------------------------H--
Confidence            3445433  5699999999999999876       7999999875320000                          0  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGHERLKSALAH  438 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~  438 (581)
                                 -.+.+|.+.+.++     ++++|.  +.+.-+  ...-+|||||++|++|.+++....-.......++.
T Consensus       116 -----------~~~~~Ei~il~~l-----~HpnIV--~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~  177 (346)
T 4fih_A          116 -----------ELLFNEVVIMRDY-----QHENVV--EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL  177 (346)
T ss_dssp             -----------GGGHHHHHHHHHC-----CCTTBC--CEEEEEEETTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHH
T ss_pred             -----------HHHHHHHHHHHhC-----CCCCCC--cEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHH
Confidence                       0123344444433     123322  222222  23457999999999999998653322222334444


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ ++.||..||+||||||+|||++       .+|      .++|+|||+++.+..+....     ...+-.-.+.+
T Consensus       178 qi~~a-L~ylH~~~IiHRDlKp~NILl~-------~~g------~vKl~DFGla~~~~~~~~~~-----~~~~GTp~YmA  238 (346)
T 4fih_A          178 AVLQA-LSVLHAQGVIHRDIKSDSILLT-------HDG------RVKLSDFGFCAQVSKEVPRR-----KSLVGTPYWMA  238 (346)
T ss_dssp             HHHHH-HHHHHHTTEECCCCSGGGEEEC-------TTC------CEEECCCTTCEECCSSSCCB-----CCCCSCGGGCC
T ss_pred             HHHHH-HHHHHHCCcccccCCHHHEEEC-------CCC------CEEEecCcCceecCCCCCcc-----cccccCcCcCC
Confidence            44444 8889999999999999999998       777      89999999999876532110     00112235677


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +|.+. -..+....|.|+++..+.+++.+.
T Consensus       239 PEvl~-~~~y~~~~DiWSlGvilyeml~G~  267 (346)
T 4fih_A          239 PELIS-RLPYGPEVDIWSLGIMVIEMVDGE  267 (346)
T ss_dssp             HHHHT-TCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             HHHHC-CCCCCcHHHHHHHHHHHHHHHHCC
Confidence            77654 344566789999999999999883

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.82  E-value=8.9e-22  Score=204.38  Aligned_cols=208  Identities=17%  Similarity=0.157  Sum_probs=134.3

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|+||+|+.+.+       |+.||||+......   .          .         .    +     
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~~~-------~~~~AiK~i~k~~~---~----------~---------~----~-----   74 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLARELAT-------SREYAIKILEKRHI---I----------K---------E----N-----   74 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEEHHHH---H----------H---------T----T-----
T ss_pred             ccEEEEEEecccCeEEEEEEECCC-------CCEEEEEEEEHHHC---C----------C---------H----H-----
Confidence            344 57899999999999999876       79999999753200   0          0         0    0     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                           ..-.+.+|.+.+.++     ++++|  .+.+.-+  ...-+|||||++|++|.+++..... .......+...++
T Consensus        75 -----~~~~~~~E~~il~~l-----~HpnI--v~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~  142 (311)
T 4aw0_A           75 -----KVPYVTRERDVMSRL-----DHPFF--VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV  142 (311)
T ss_dssp             -----CHHHHHHHHHHHTTC-----CCTTB--CCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHhC-----CCCCC--CeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHH
Confidence                 001234455544332     13332  2333222  2334799999999999999865322 1122233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ ++.+|..|++||||||+|||++       .+|      .++|+|||+++.++++......   ..++-.-.|.++|.
T Consensus       143 ~a-l~ylH~~~IiHRDlKPeNILl~-------~~g------~vKl~DFGla~~~~~~~~~~~~---~~~~GTp~YmAPEv  205 (311)
T 4aw0_A          143 SA-LEYLHGKGIIHRDLKPENILLN-------EDM------HIQITDFGTAKVLSPESKQARA---NSFVGTAQYVSPEL  205 (311)
T ss_dssp             HH-HHHHHHTTEECSCCSGGGEEEC-------TTS------CEEECCCTTCEECCTTTTCCCB---CCCCSCGGGCCHHH
T ss_pred             HH-HHHHHHCCCccCCCCHHHeEEc-------CCC------CEEEEEcCCceecCCCCCcccc---cCcccCcccCCHHH
Confidence            44 8899999999999999999998       777      8999999999988654322110   00011235677777


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSAC  561 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~  561 (581)
                      +.. ..+....|.|+++..+.+++.+.  |...+..+++..+
T Consensus       206 l~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i  246 (311)
T 4aw0_A          206 LTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKI  246 (311)
T ss_dssp             HHH-SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             HcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            655 33455679999999999999884  4555555555443

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.81  E-value=3.9e-20  Score=199.51  Aligned_cols=187  Identities=19%  Similarity=0.148  Sum_probs=125.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+....-...                          .          
T Consensus       156 ~~~iG~G~fG~V~~a~~~~t-------g~~vAiK~i~~~~~~~--------------------------~----------  192 (423)
T 4fie_A          156 FIKIGEGSTGIVCIATVRSS-------GKLVAVKKMDLRKQQR--------------------------R----------  192 (423)
T ss_dssp             EEEEEECSSCEEEEEEETTT-------CCEEEEEEEESTTCSS--------------------------G----------
T ss_pred             eeEeccCcCcEEEEEEECCC-------CCEEEEEEEeccchhH--------------------------H----------
Confidence            35799999999999999876       7999999975321100                          0          


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                         -.+.+|...+.++     ++++|.  +.+.-+  ...-+|||||++|++|.+++....-.......++..++.+ ++
T Consensus       193 ---~~~~~Ei~il~~l-----~HpnIV--~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~a-L~  261 (423)
T 4fie_A          193 ---ELLFNEVVIMRDY-----QHENVV--EMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQA-LS  261 (423)
T ss_dssp             ---GGHHHHHHHHHHC-----CCTTBC--CEEEEEEETTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHH-HH
T ss_pred             ---HHHHHHHHHHHhC-----CCCCCC--ceEEEEEECCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHH-HH
Confidence               0123344444333     123222  222222  2345799999999999999865332222223444444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..||+||||||+|||++       .+|      .++|+|||+++.+..+....     ..++-.-++.+.|.+.. .
T Consensus       262 ylH~~~IiHRDiKp~NILl~-------~~g------~vKl~DFGla~~~~~~~~~~-----~~~~GTp~YmAPEvl~~-~  322 (423)
T 4fie_A          262 VLHAQGVIHRDIKSDSILLT-------HDG------RVKLSDFGFCAQVSKEVPRR-----KSLVGTPYWMAPELISR-L  322 (423)
T ss_dssp             HHHHTTEECCCCSTTTEEEC-------TTC------CEEECCCTTCEECCSSCCCB-----CCCEECTTTCCHHHHTT-C
T ss_pred             HHHHCCeecccCCHHHEEEc-------CCC------CEEEecCccceECCCCCccc-----cccccCcCcCCHHHHCC-C
Confidence            89999999999999999999       777      89999999999876542110     00112235677776643 4


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .+....|.|++++.+.+++.+.
T Consensus       323 ~y~~~~DiWSlGvilyeml~G~  344 (423)
T 4fie_A          323 PYGPEVDIWSLGIMVIEMVDGE  344 (423)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCcHHHHHHHHHHHHHHHHCC
Confidence            4566789999999999999883

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.81  E-value=1.1e-20  Score=198.28  Aligned_cols=187  Identities=14%  Similarity=0.085  Sum_probs=118.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||.||+|+.+.+       |+.||||+.+.....                                      
T Consensus        63 ~~~lG~G~fG~Vy~a~~~~~-------g~~vAiK~i~~~~~~--------------------------------------   97 (336)
T 4g3f_A           63 QPRVGRGSFGEVHRMKDKQT-------GFQCAVKKVRLEVFR--------------------------------------   97 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEETTTCC--------------------------------------
T ss_pred             CcEeccCCCeEEEEEEECCC-------CCEEEEEEECHHHhH--------------------------------------
Confidence            45799999999999999876       799999998654110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                            .+|+..+.++     ++++|  .+.|.-+  ...-+|||||++|++|.++++.... .......++..++.+ +
T Consensus        98 ------~~E~~il~~l-----~HpnI--V~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~a-L  163 (336)
T 4g3f_A           98 ------VEELVACAGL-----SSPRI--VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEG-L  163 (336)
T ss_dssp             ------THHHHTTTTC-----CCTTB--CCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             ------HHHHHHHHhC-----CCCCC--CcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence                  1133222211     12222  2222222  2234799999999999999865322 122223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++||||||+|||++       .+|     .+++|+|||+++.+.++....-...-..++-.-.+.++|.+.. 
T Consensus       164 ~ylH~~~IiHRDlKp~NILl~-------~~g-----~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~-  230 (336)
T 4g3f_A          164 EYLHTRRILHGDVKADNVLLS-------SDG-----SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-  230 (336)
T ss_dssp             HHHHTTTEECSCCCGGGEEEC-------TTS-----CCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTT-
T ss_pred             HHHHHCCceecccCHHHEEEe-------CCC-----CEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCC-
Confidence            889999999999999999998       554     1599999999998865432211000000011234677787754 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..+....|.|+++..+.+++++
T Consensus       231 ~~y~~~~DiwSlGvilyemltG  252 (336)
T 4g3f_A          231 KPCDAKVDIWSSCCMMLHMLNG  252 (336)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCcHHHHHHHHHHHHHHHHC
Confidence            3455667999999999999877

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.81  E-value=1.3e-19  Score=191.69  Aligned_cols=210  Identities=18%  Similarity=0.121  Sum_probs=134.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|+.+.+    ...++.||||+..+.-..                                      
T Consensus        26 ~~~lG~G~fg~Vy~a~~~~~----~~~~~~vAiK~i~~~~~~--------------------------------------   63 (361)
T 4f9c_A           26 EDKIGEGTFSSVYLATAQLQ----VGPEEKIALKHLIPTSHP--------------------------------------   63 (361)
T ss_dssp             EEEEEECSSEEEEEEEEEBT----TSCEEEEEEEEECTTSCH--------------------------------------
T ss_pred             EEEEecccCcEEEEEEEccc----CCCCCEEEEEEEccccCH--------------------------------------
Confidence            57899999999999987531    012589999987654110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                         ..+.+|.+.+.++    .++++|.  +.+.  .....-+|||||++|++|.+++...  .......+...++.+ ++
T Consensus        64 ---~~~~~E~~~l~~~----~~h~nIv--~l~~~~~~~~~~~lvmE~~~g~~L~~~~~~l--~~~~~~~~~~qll~a-l~  131 (361)
T 4f9c_A           64 ---IRIAAELQCLTVA----GGQDNVM--GVKYCFRKNDHVVIAMPYLEHESFLDILNSL--SFQEVREYMLNLFKA-LK  131 (361)
T ss_dssp             ---HHHHHHHHHHHHT----CSBTTBC--CCSEEEEETTEEEEEEECCCCCCHHHHHTTC--CHHHHHHHHHHHHHH-HH
T ss_pred             ---HHHHHHHHHHHHh----cCCCCCc--eEEEEEEECCEEEEEEeCCCcccHHHHHcCC--CHHHHHHHHHHHHHH-HH
Confidence               0112233333222    2233322  2222  2233457999999999999988532  222233445555544 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccc-cccCCCCeEEEEecccccccCHhhHH----------------HHH-----
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQK-RLFRSKPHVIFLDVGMTAELSKTDRV----------------NLV-----  504 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~-g~~~~~~~lvLiDFGl~~~L~~~~r~----------------~l~-----  504 (581)
                      .+|..|++|||+||+|||++       .+ |      +++|+|||+++...+..-.                +.+     
T Consensus       132 ylH~~gIiHRDiKPeNiLl~-------~~~~------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (361)
T 4f9c_A          132 RIHQFGIVHRDVKPSNFLYN-------RRLK------KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLS  198 (361)
T ss_dssp             HHHHTTEECSCCSGGGEEEE-------TTTT------EEEECCCTTCEECTTCSCGGGGGC-------------------
T ss_pred             HHHHCCeEeCcCCHHHeEEe-------CCCC------eEEECcCCCCcccCCcccccccccccccccccccccccccccc
Confidence            89999999999999999998       33 5      8999999999765432100                000     


Q ss_pred             --HHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh---hccccHHHHHHHHHHHH
Q 008021          505 --EFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV---LRRVIWSILLSACSNYL  565 (581)
Q Consensus       505 --~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~---~~~~~~~~ll~~~~~~l  565 (581)
                        ......+-.-+|.++|.+.....+....|.|++++.+.+++.+.   +...+..+++..+.+++
T Consensus       199 ~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~  264 (361)
T 4f9c_A          199 RRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIR  264 (361)
T ss_dssp             -------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred             ccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhc
Confidence              00111122346889999877656667789999999999999983   45556666676666654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.80  E-value=1.4e-19  Score=186.74  Aligned_cols=194  Identities=13%  Similarity=0.073  Sum_probs=115.7

Q ss_pred             CC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHH
Q 008021          287 FE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA  365 (581)
Q Consensus       287 fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~  365 (581)
                      |+ .+.||+|++|+||+|+.+.+       |+.||||+.+..-.+                            ..    .
T Consensus         7 y~~~~~lG~G~fg~V~~a~~~~~-------~~~vAiK~i~~~~~~----------------------------~~----~   47 (299)
T 4g31_A            7 FEPIQCLGRGGFGVVFEAKNKVD-------DCNYAIKRIRLPNRE----------------------------LA----R   47 (299)
T ss_dssp             EEEEEEEEECC--EEEEEEETTT-------CCEEEEEEEEECSSH----------------------------HH----H
T ss_pred             CEEeeEEecCCCeEEEEEEECCC-------CCEEEEEEEeccCCH----------------------------HH----H
Confidence            44 57899999999999999875       799999986532110                            00    0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC------------C--CcEEEEeccCCccHHHHHHhhhcchh
Q 008021          366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV------------H--PAVLVETYEQGECVSRYVDELQGHER  431 (581)
Q Consensus       366 ~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~------------t--~~VLVmEyi~G~~L~~~l~~~~~~~~  431 (581)
                            -.+.+|++.+.++     ++++|  .+.+..+.            .  .-++||||++|++|.+++........
T Consensus        48 ------~~~~~E~~il~~l-----~HpnI--V~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~  114 (299)
T 4g31_A           48 ------EKVMREVKALAKL-----EHPGI--VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE  114 (299)
T ss_dssp             ------HHHHHHHHHHTTC-----CCTTB--CCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGG
T ss_pred             ------HHHHHHHHHHHhC-----CCCCC--CeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCCh
Confidence                  1234455544432     12222  12221111            0  12699999999999999865322111


Q ss_pred             h----HHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH--
Q 008021          432 L----KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE--  505 (581)
Q Consensus       432 ~----~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~--  505 (581)
                      .    ...++..++.+ +..||..|++||||||+|||++       .+|      .++|+|||+++.++......-..  
T Consensus       115 ~~~~~~~~i~~qi~~a-l~ylH~~~IiHRDlKp~NILl~-------~~~------~vKl~DFGla~~~~~~~~~~~~~~~  180 (299)
T 4g31_A          115 RERSVCLHIFLQIAEA-VEFLHSKGLMHRDLKPSNIFFT-------MDD------VVKVGDFGLVTAMDQDEEEQTVLTP  180 (299)
T ss_dssp             SCHHHHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEEC-------TTC------CEEECCCCCC---------------
T ss_pred             hHHHHHHHHHHHHHHH-HHHHHHCcCccccCcHHHeEEC-------CCC------cEEEccCccceecCCCccccccccc
Confidence            1    12234444444 8889999999999999999998       677      89999999999887654322110  


Q ss_pred             -----HHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          506 -----FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       506 -----l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                           -....+-.-.+.++|.+.. ..+....|.|+++..+.+++.+
T Consensus       181 ~~~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyell~P  226 (299)
T 4g31_A          181 MPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELLYP  226 (299)
T ss_dssp             -----------CCCTTSCHHHHTT-CCCCTHHHHHHHHHHHHHHHSC
T ss_pred             cccccccCCcccCccccCHHHHcC-CCCCCHHHHHHHHHHHHHHccC
Confidence                 0111122335677887654 4455677999999999999853

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.79  E-value=3e-20  Score=195.65  Aligned_cols=246  Identities=11%  Similarity=0.058  Sum_probs=151.5

Q ss_pred             hcCCCCCCHHHHHHHHhhh-cCCCCCCHHHHHHHHHHHhCCChhhhh----------ccCC-ceeecccceeEEEEEEec
Q 008021          239 ATRPDLFPRDLCKKLSELH-SKAPEHSFAYTKKTIERAFGRRLSEIF----------DGFE-EAPVASGSIAQVHRASLR  306 (581)
Q Consensus       239 str~dllP~e~~~~L~~Lq-d~~pp~~~~~~~~~le~elG~~~~eiF----------~~fd-~~PIgsGSigQVyrA~l~  306 (581)
                      |+++|++++++.+++..++ +.+++.+.......+..++- +.+..+          ..|. .+.||+|++|+||+|+.+
T Consensus        17 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~   95 (377)
T 3byv_A           17 QGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLW-NTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQ   95 (377)
T ss_dssp             CCTTHHHHHHHHHHCGGGCCCSTTC-CHHHHHHHHHHHTC-C-CCEEEEEESSSCCCEEEEEEEEEEEETTEEEEEEEC-
T ss_pred             CCCchHHHHHHHHhCcccccccccccccchhhhhhHHHhc-CCCCcEEEEeecCCCCceEEEcceeecCCCEEEEEEEEC
Confidence            6889999999999999999 99999999999998887762 222222          2333 589999999999999987


Q ss_pred             cCCCCCCCCCeEEEEEEecCCch------hhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHH
Q 008021          307 FRYPGQKVKPIVVAVKVRHPGVG------ESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH  380 (581)
Q Consensus       307 ~~~~G~~~~g~~VAVKV~~P~v~------~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~n  380 (581)
                      .+       |+.||||+.++...      +.+.+++.+++.       +   +.++                     ..|
T Consensus        96 ~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-------l---~~l~---------------------hpn  137 (377)
T 3byv_A           96 ET-------GESFEVHVPYFTERPPSNAIKQMKEEVLRLRL-------L---RGIK---------------------NQK  137 (377)
T ss_dssp             CC-------CCEEEEEEEEECC-CCTTHHHHHHHHHHGGGG-------S---TTCC---------------------SHH
T ss_pred             CC-------CcEEEEEEEeeccccchHHHHHHHHHHHHHHh-------c---cccC---------------------CHH
Confidence            64       69999999864311      122222211111       1   0111                     135


Q ss_pred             HHHHHHhcccCCCcc-cc---cccccC-------CCCcEEEEeccCCccHHHHHHhhhcch--------hhHHHHHHHHH
Q 008021          381 LSRFIYNFRRWKDVS-FP---KPVYPL-------VHPAVLVETYEQGECVSRYVDELQGHE--------RLKSALAHIGT  441 (581)
Q Consensus       381 l~rf~~~f~~~~~V~-vP---~~~~~l-------~t~~VLVmEyi~G~~L~~~l~~~~~~~--------~~~~~la~~~i  441 (581)
                      +.++...+....++. .+   ......       ....+|||||++ ++|.+++.......        .....++..++
T Consensus       138 iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~  216 (377)
T 3byv_A          138 QAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVI  216 (377)
T ss_dssp             HHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCS-EEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccC-CCHHHHHHhccccccccccccHHHHHHHHHHHH
Confidence            555543222111000 00   000000       012469999995 59999886532111        11122444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+||||+|||++       .+|      +++|+|||++...+.....        . .+..+.++|.
T Consensus       217 ~a-L~~LH~~~ivHrDikp~NIll~-------~~~------~~kL~DFG~a~~~~~~~~~--------~-~g~~y~aPE~  273 (377)
T 3byv_A          217 RL-LASLHHYGLVHTYLRPVDIVLD-------QRG------GVFLTGFEHLVRDGARVVS--------S-VSRGFEPPEL  273 (377)
T ss_dssp             HH-HHHHHHTTEECSCCCGGGEEEC-------TTC------CEEECCGGGCEETTCEEEC--------C-CCTTCCCHHH
T ss_pred             HH-HHHHHhCCeecCCCCHHHEEEc-------CCC------CEEEEechhheecCCcccC--------C-CCcCccChhh
Confidence            44 7889999999999999999999       667      8999999999865432110        0 1134556666


Q ss_pred             HHhh----------cCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRL----------SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l----------~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +...          .......|.|+|+..+.+++.+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg  309 (377)
T 3byv_A          274 EARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA  309 (377)
T ss_dssp             HHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred             hcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence            6544          1344456888888888887765

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.79  E-value=8.2e-20  Score=188.47  Aligned_cols=191  Identities=17%  Similarity=0.160  Sum_probs=121.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|+++..  ....+|+.||||+.+..-.                             +         
T Consensus        18 ~~~lG~G~fG~Vy~a~~~~~--~~~~~~~~vAvK~l~~~~~-----------------------------~---------   57 (299)
T 4asz_A           18 KRELGEGAFGKVFLAECYNL--CPEQDKILVAVKTLKDASD-----------------------------N---------   57 (299)
T ss_dssp             EEEEEC--CCCEEEEEECSC--C----CEEEEEEEECSCCH-----------------------------H---------
T ss_pred             eeEEeeCCCcEEEEEEECCc--ccCCCCEEEEEEEeCCCCh-----------------------------H---------
Confidence            47899999999999998631  1112368999999765311                             0         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--------------chhh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--------------HERL  432 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--------------~~~~  432 (581)
                       .+-+|.+|++.+.++     ++++|.  +.+.  ......+|||||++|++|.+++.....              ....
T Consensus        58 -~~~~f~~E~~il~~l-----~HpnIV--~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~  129 (299)
T 4asz_A           58 -ARKDFHREAELLTNL-----QHEHIV--KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ  129 (299)
T ss_dssp             -HHHHHHHHHHHHTTC-----CCTTBC--CEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHH
T ss_pred             -HHHHHHHHHHHHHhC-----CCCCCc--cEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHH
Confidence             012356677666543     233332  2222  122355899999999999999865211              1112


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh
Q 008021          433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR  512 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~  512 (581)
                      ...++..++.+ +..||..|++||||||.|||++       .++      .++|.|||+++.+..........    ...
T Consensus       130 ~~~i~~qia~g-l~yLH~~~iiHRDlKp~NILl~-------~~~------~~Ki~DFGla~~~~~~~~~~~~~----~~~  191 (299)
T 4asz_A          130 MLHIAQQIAAG-MVYLASQHFVHRDLATRNCLVG-------ENL------LVKIGDFGMSRDVYSTDYYRVGG----HTM  191 (299)
T ss_dssp             HHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCCSCHHHHTGGGCEEETT----TEE
T ss_pred             HHHHHHHHHHH-HHHHHhCCcccCccCHhhEEEC-------CCC------cEEECCcccceecCCCCceeecC----cee
Confidence            23344444444 8889999999999999999999       677      89999999998665443211000    000


Q ss_pred             hc-HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          513 RD-GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       513 ~D-~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +. .+.++|.+.. ..+....|.|+|+..+.|+++
T Consensus       192 gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt  225 (299)
T 4asz_A          192 LPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFT  225 (299)
T ss_dssp             ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             cChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHc
Confidence            11 2456666644 455566799999999999986

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.79  E-value=1.1e-19  Score=187.56  Aligned_cols=224  Identities=17%  Similarity=0.112  Sum_probs=142.8

Q ss_pred             HHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhh
Q 008021          252 KLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGES  331 (581)
Q Consensus       252 ~L~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~  331 (581)
                      ....|.-..++.+.+++++.++..++.+....+-++ .++||+|++|+||+|+++.+       |+.||||+.++.....
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lg~G~~g~V~~a~~~~~-------g~~vavK~~~~~~~~~   85 (321)
T 2c30_A           14 GTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDS-YVKIGEGSTGIVCLAREKHS-------GRQVAVKMMDLRKQQR   85 (321)
T ss_dssp             -----------CCHHHHHHHHHTTSCSSCHHHHEEE-EEEEEEETTEEEEEEEETTT-------CCEEEEEEEETTTCCS
T ss_pred             hccceeecCCcCcHHHHHHHHhhccCCCCchhhhhc-cEEeccCCCeEEEEEEECCC-------CcEEEEEEEeccchhH
Confidence            344566667889999999999998887655554333 35899999999999999764       7999999987653211


Q ss_pred             HHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEE
Q 008021          332 IRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE  411 (581)
Q Consensus       332 i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVm  411 (581)
                      .                                       -.+.+|+..+.++     .++++.-+..+.......++||
T Consensus        86 ~---------------------------------------~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~  121 (321)
T 2c30_A           86 R---------------------------------------ELLFNEVVIMRDY-----QHFNVVEMYKSYLVGEELWVLM  121 (321)
T ss_dssp             H---------------------------------------HHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEEEEEE
T ss_pred             H---------------------------------------HHHHHHHHHHHhC-----CCCCcceEEEEEEECCEEEEEE
Confidence            0                                       0123455554433     1333332222233345678999


Q ss_pred             eccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccc
Q 008021          412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGM  491 (581)
Q Consensus       412 Eyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl  491 (581)
                      ||++|.+|.+++............++..++.+ +..||..|++|+|+||+||+++       .+|      +++|+|||+
T Consensus       122 e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~-L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kl~Dfg~  187 (321)
T 2c30_A          122 EFLQGGALTDIVSQVRLNEEQIATVCEAVLQA-LAYLHAQGVIHRDIKSDSILLT-------LDG------RVKLSDFGF  187 (321)
T ss_dssp             CCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEC-------TTC------CEEECCCTT
T ss_pred             ecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHCCeecCCCCHHHEEEC-------CCC------cEEEeeeee
Confidence            99999999998864322222233444444443 8889999999999999999998       677      899999999


Q ss_pred             ccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          492 TAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       492 ~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +..++......     ........+.++|.+.. .......|.|+|+..+.+++.+
T Consensus       188 ~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g  237 (321)
T 2c30_A          188 CAQISKDVPKR-----KSLVGTPYWMAPEVISR-SLYATEVDIWSLGIMVIEMVDG  237 (321)
T ss_dssp             CEECCSSSCCB-----CCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             eeecccCcccc-----ccccCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhC
Confidence            88765432110     00011223556665533 3344567889999999988876

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.78  E-value=6e-19  Score=184.36  Aligned_cols=192  Identities=19%  Similarity=0.150  Sum_probs=116.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|+++...  ...+|+.||||+.+..-..                                      
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~--~~~~~~~vAvK~l~~~~~~--------------------------------------   85 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLL--PEQDKMLVAVKALKEASES--------------------------------------   85 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSC--C---CEEEEEEEESCCSHH--------------------------------------
T ss_pred             EEEEccCCCcEEEEEEECCcc--cCCCCeEEEEEEECcCCHH--------------------------------------
Confidence            467999999999999976310  1123689999997643110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc----------------h
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH----------------E  430 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~----------------~  430 (581)
                       ..-+|.+|++.+.++     ++++|.  +.+.  ......+|||||++|++|.+++......                .
T Consensus        86 -~~~~f~~E~~il~~l-----~HpnIV--~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~  157 (329)
T 4aoj_A           86 -ARQDFQREAELLTML-----QHQHIV--RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL  157 (329)
T ss_dssp             -HHHHHHHHHHHHTTC-----CCTTBC--CEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCH
T ss_pred             -HHHHHHHHHHHHHhC-----CCCCCC--cEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCH
Confidence             012356677666543     233332  2222  1223458999999999999998642211                1


Q ss_pred             hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          431 RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       431 ~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      .....++..++.+ +..||..|++||||||.|||++       .++      .++|.|||+++.+..........   ..
T Consensus       158 ~~~~~i~~qia~g-l~yLH~~~iiHRDLKp~NILl~-------~~~------~~Ki~DFGla~~~~~~~~~~~~~---~~  220 (329)
T 4aoj_A          158 GQLLAVASQVAAG-MVYLAGLHFVHRDLATRNCLVG-------QGL------VVKIGDFGMSRDIYSTDYYRVGG---RT  220 (329)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEE-------TTT------EEEECCCC-------------------C
T ss_pred             HHHHHHHHHHHHH-HHHHhcCCeecccccHhhEEEC-------CCC------cEEEcccccceeccCCCcceecC---cc
Confidence            1122344444443 7889999999999999999999       667      99999999998775543322110   00


Q ss_pred             HhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       511 ~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .-.-.+.++|.+.. ..+....|.|+|...+.|+++
T Consensus       221 ~gt~~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt  255 (329)
T 4aoj_A          221 MLPIRWMPPESILY-RKFTTESDVWSFGVVLWEIFT  255 (329)
T ss_dssp             CCCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccccccChhhhcC-CCCCccccccchHHHHHHHHc
Confidence            01113566776543 445556799999999999986

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.78  E-value=2.3e-19  Score=185.95  Aligned_cols=192  Identities=17%  Similarity=0.114  Sum_probs=122.1

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      ++++. .+.||+|+||.||+|+++          ..||||+.+..-..                           .+.. 
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~----------~~vAvK~~~~~~~~---------------------------~~~~-   76 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH----------GDVAVKILKVVDPT---------------------------PEQF-   76 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS----------SEEEEEECCCSSCC---------------------------HHHH-
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC----------CcEEEEEEEecCCC---------------------------HHHH-
Confidence            44454 578999999999999874          46999997643110                           0111 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQG--HERLKSALAH  438 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~  438 (581)
                               -+|.+|++.+.++.     +++|.  +.+ .++  ...+|||||++|++|.+++.....  .......++.
T Consensus        77 ---------~~f~~E~~il~~l~-----HpNIV--~l~-g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~  139 (307)
T 3omv_A           77 ---------QAFRNEVAVLRKTR-----HVNIL--LFM-GYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIAR  139 (307)
T ss_dssp             ---------HHHHHHHHHHTTCC-----CTTBC--CEE-EEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHhCC-----CCCEe--eEE-EEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHH
Confidence                     13566776665442     33332  222 222  345899999999999999864322  1222234554


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ +..||..|++||||||.|||++       .++      .++|+|||+++.++........   ....-.-.+.+
T Consensus       140 qia~g-L~yLH~~~IiHRDlKp~NILl~-------~~~------~~Ki~DFGla~~~~~~~~~~~~---~~~~GT~~ymA  202 (307)
T 3omv_A          140 QTAQG-MDYLHAKNIIHRDMKSNNIFLH-------EGL------TVKIGDFGLATVKSRWSGSQQV---EQPTGSVLWMA  202 (307)
T ss_dssp             HHHHH-HHHHHHTTCBCSCCCSSSEEEE-------TTE------EEEECCCSSCBC---------------CCCCTTSCC
T ss_pred             HHHHH-HHHHHHCCccCCccCHHHEEEC-------CCC------cEEEeeccCceecccCCcceee---cccccCCCccC
Confidence            44444 8889999999999999999999       777      9999999999877543322111   11111224567


Q ss_pred             HHHHHhh--cCCCCCCCHHHHHHHHHHhhhH
Q 008021          519 AECTLRL--SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       519 ~e~ll~l--~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|.+...  +.+....|.|+|+..+.+++++
T Consensus       203 PE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg  233 (307)
T 3omv_A          203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTG  233 (307)
T ss_dssp             HHHHHCCSSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             HHHhhccCCCCCCcHHHhHhHHHHHHHHHHC
Confidence            7776532  2344457999999999999987

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.78  E-value=1.3e-19  Score=194.24  Aligned_cols=212  Identities=17%  Similarity=0.113  Sum_probs=134.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|+.+.+       |+.||||+.+......                           .    ..   
T Consensus        59 ~~~lG~G~fG~V~~a~~~~t-------~~~vAiK~i~~~~~~~---------------------------~----~~---   97 (398)
T 4b99_A           59 IETIGNGAYGVVSSARRRLT-------GQQVAIKKIPNAFDVV---------------------------T----NA---   97 (398)
T ss_dssp             EEEEEECSSCEEEEEEETTT-------CCEEEEEEETTTTSSH---------------------------H----HH---
T ss_pred             EEEEecccCeEEEEEEECCC-------CCEEEEEEECccccch---------------------------H----HH---
Confidence            47899999999999999876       7999999975431100                           0    00   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-ccccccc-----CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYP-----LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~-----l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                         -.+.+|.+.+.++.     +++|. +-.++..     ....-+|||||++| .|.+++..... .......++..++
T Consensus        98 ---~~~~~Ei~il~~l~-----HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g-~L~~~i~~~~~l~~~~~~~~~~qil  168 (398)
T 4b99_A           98 ---KRTLRELKILKHFK-----HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLL  168 (398)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTTBCCEEEECCCSSCTTTCCCEEEEEECCSE-EHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhcC-----CCCcceEeeeeecccccccCCEEEEEEeCCCC-CHHHHHHhcCCCCHHHHHHHHHHHH
Confidence               11234555554432     23221 1111111     11234799999986 57777754221 1122233444554


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++||||||+|||++       .+|      .++++|||+++.+.......-. .....+-.-++.++|+
T Consensus       169 ~a-l~ylH~~~iiHRDlKP~NIl~~-------~~~------~~Ki~DFGla~~~~~~~~~~~~-~~~~~~GT~~Y~APEv  233 (398)
T 4b99_A          169 RG-LKYMHSAQVIHRDLKPSNLLVN-------ENC------ELKIGDFGMARGLCTSPAEHQY-FMTEYVATRWYRAPEL  233 (398)
T ss_dssp             HH-HHHHHHTTCBCCCCCGGGEEEC-------TTC------CEEECCCTTCBCC-------CC-CCCSSCCCCTTCCHHH
T ss_pred             HH-HHHHHHCcCcCCCcCccccccC-------CCC------CEEEeecceeeecccCcccccc-ccccceeChHhcCHHH
Confidence            44 8889999999999999999999       677      8999999999877543221100 0001122346788998


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHHH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNYL  565 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~l  565 (581)
                      ++....+....|.|++++.+.+++.+.  |...+..+++..+.+..
T Consensus       234 ~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~  279 (398)
T 4b99_A          234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL  279 (398)
T ss_dssp             HTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHH
T ss_pred             hcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhc
Confidence            877666677789999999999999983  66666666666665543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.78  E-value=4.6e-20  Score=189.69  Aligned_cols=198  Identities=16%  Similarity=0.105  Sum_probs=127.0

Q ss_pred             CCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccC
Q 008021          277 GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLR  356 (581)
Q Consensus       277 G~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~  356 (581)
                      |...+.-|..|+ +.||+|++|.||+|+.+.+       |+.||||+.......                          
T Consensus        20 ~~~~~gr~~~~~-~~iG~G~fg~Vy~a~~~~~-------~~~vAiK~i~~~~~~--------------------------   65 (290)
T 3fpq_A           20 GMSNDGRFLKFD-IEIGRGSFKTVYKGLDTET-------TVEVAWCELQDRKLT--------------------------   65 (290)
T ss_dssp             EECTTSSEEEEE-EEEEECSSEEEEEEEETTT-------CCEEEEEEEEGGGSC--------------------------
T ss_pred             CcCCCCceEEee-eEEecCcCcEEEEEEECCC-------CeEEEEEEEchhhCC--------------------------
Confidence            333333344454 4599999999999999875       799999987543100                          


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC---C---CcEEEEeccCCccHHHHHHhhhcc-
Q 008021          357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV---H---PAVLVETYEQGECVSRYVDELQGH-  429 (581)
Q Consensus       357 l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~---t---~~VLVmEyi~G~~L~~~l~~~~~~-  429 (581)
                       ...          .-.|.+|++.+.++.     +++|  .+.+.-+.   .   .-+|||||++|++|.+++...... 
T Consensus        66 -~~~----------~~~~~~E~~il~~l~-----HpnI--V~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~  127 (290)
T 3fpq_A           66 -KSE----------RQRFKEEAEMLKGLQ-----HPNI--VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK  127 (290)
T ss_dssp             -HHH----------HHHHHHHHHHHHTCC-----CTTB--CCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCC
T ss_pred             -HHH----------HHHHHHHHHHHHhCC-----CCCC--CcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCC
Confidence             000          013456766665432     3332  22222111   1   137999999999999998653221 


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCC--eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDN--FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF  507 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G--~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~  507 (581)
                      ......++..++.+ +..||.+|  ++||||||+|||++   .   .+|      .++|+|||+++.........+    
T Consensus       128 ~~~~~~~~~qi~~a-L~ylH~~~~~IiHRDlKp~NILl~---~---~~g------~vKl~DFGla~~~~~~~~~~~----  190 (290)
T 3fpq_A          128 IKVLRSWCRQILKG-LQFLHTRTPPIIHRDLKCDNIFIT---G---PTG------SVKIGDLGLATLKRASFAKAV----  190 (290)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHTSSSCCCCCCCCGGGEEES---S---TTS------CEEECCTTGGGGCCTTSBEES----
T ss_pred             HHHHHHHHHHHHHH-HHHHHHCCCCEEecccChhheeEE---C---CCC------CEEEEeCcCCEeCCCCccCCc----
Confidence            12223344444444 88899998  99999999999997   1   356      899999999976544322211    


Q ss_pred             HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       508 ~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                         +-.-.+.++|.+.  +.+....|.|+|+..+.+++++.
T Consensus       191 ---~GTp~YmAPE~~~--~~y~~~~DiwSlGvilyelltg~  226 (290)
T 3fpq_A          191 ---IGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSE  226 (290)
T ss_dssp             ---CSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ---ccCccccCHHHcC--CCCCcHHHHHHHHHHHHHHHHCC
Confidence               1223556677542  45666789999999999999873

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.77  E-value=3.6e-20  Score=191.73  Aligned_cols=203  Identities=16%  Similarity=0.081  Sum_probs=123.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+.    ..++.||||+.+......                    -..              
T Consensus        29 ~~~lG~G~fg~Vy~a~~~~~~----~~~~~vAiK~i~~~~~~~--------------------~~~--------------   70 (304)
T 3ubd_A           29 LKVLGQGSFGKVFLVKKISGS----DARQLYAMKVLKKATLKV--------------------RDR--------------   70 (304)
T ss_dssp             EEEEECGGGCEEEEEEECSST----TTTCEEEEEEEESEEEEE--------------------EEC--------------
T ss_pred             EEEEecCCCeEEEEEEEccCC----CCCEEEEEEEEehHHcCh--------------------HHH--------------
Confidence            578999999999999875321    126899999987542110                    000              


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         ..+.+|++.+.++     ++++|  .+.+.-+  ...-+|||||++|++|.+++..... .......++..++.+ +
T Consensus        71 ---~~~~~E~~il~~l-----~HpnI--v~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~a-L  139 (304)
T 3ubd_A           71 ---VRTKMERDILVEV-----NHPFI--VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA-L  139 (304)
T ss_dssp             ---C------CCCCCC-----CCTTE--ECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHHC-----CCCCC--CeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               0122343322211     12222  2222222  2345799999999999999865322 112223344444443 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|||+||+|||++       .+|      .++|+|||+++.+.+.....     ....-.-.+.++|.+.. 
T Consensus       140 ~ylH~~~IiHRDlKp~NILl~-------~~g------~vKl~DFGla~~~~~~~~~~-----~~~~GT~~YmAPE~~~~-  200 (304)
T 3ubd_A          140 DHLHSLGIIYRDLKPENILLD-------EEG------HIKLTDFGLSKESIDHEKKA-----YSFCGTVEYMAPEVVNR-  200 (304)
T ss_dssp             HHHHHTTCCCSSCCGGGEEEC-------TTS------CEEEESSEEEEC-----CCC-----CSCCCCGGGCCHHHHHT-
T ss_pred             HHHHHCCCcCCCCCHHHeEEc-------CCC------CEEecccccceeccCCCccc-----cccccCcccCCHHHhcc-
Confidence            889999999999999999998       777      89999999998764432110     00112235677777654 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLS  559 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~  559 (581)
                      ..+....|.|+++..+.+++++.  +...+..+++.
T Consensus       201 ~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~  236 (304)
T 3ubd_A          201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT  236 (304)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHH
Confidence            44556789999999999999883  44444444443

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.77  E-value=3.6e-19  Score=184.42  Aligned_cols=193  Identities=15%  Similarity=0.092  Sum_probs=122.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||.||+|++...  +....++.||||+.++......                                    
T Consensus        31 ~~~lG~G~fG~Vykg~~~~~--~~~~~~~~VAvK~l~~~~~~~~------------------------------------   72 (308)
T 4gt4_A           31 MEELGEDRFGKVYKGHLFGP--APGEQTQAVAIKTLKDKAEGPL------------------------------------   72 (308)
T ss_dssp             EEEEEECSSCEEEEEEEC---------CEEEEEEECCC-CCC-C------------------------------------
T ss_pred             eeEeccCCCcEEEEEEEcCC--ccCCCCeEEEEEEECcccChHH------------------------------------
Confidence            35699999999999998531  1112368999999765422110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----------------c
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----------------H  429 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~  429 (581)
                        .-+|.+|+..+.++.     +++|.  +.+.  ....+.+|||||++|++|.+++.....                 .
T Consensus        73 --~~~f~~E~~il~~l~-----HpNIV--~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~  143 (308)
T 4gt4_A           73 --REEFRHEAMLRARLQ-----HPNVV--CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE  143 (308)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTBC--CEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCC
T ss_pred             --HHHHHHHHHHHHhCC-----CCCCC--CcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCC
Confidence              013566776665542     33332  1221  122345899999999999999854211                 0


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA  509 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~A  509 (581)
                      ......++..++.+ +..||..|++||||||.|||++       .++      .++|.|||+++.+...+......   .
T Consensus       144 ~~~~~~i~~qia~g-l~yLH~~~iiHRDLK~~NILl~-------~~~------~~Ki~DFGlar~~~~~~~~~~~~---~  206 (308)
T 4gt4_A          144 PPDFVHLVAQIAAG-MEYLSSHHVVHKDLATRNVLVY-------DKL------NVKISDLGLFREVYAADYYKLLG---N  206 (308)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCSCCBCGGGGGGCBCSSS---S
T ss_pred             HHHHHHHHHHHHHH-HHHHHhCCCCCCCccccceEEC-------CCC------CEEECCcccceeccCCCceeEec---c
Confidence            11123344444443 8889999999999999999999       777      89999999998775543211000   0


Q ss_pred             HHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       510 l~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..-.-.+.++|.+.. +.+....|.|+|+..+.|+++
T Consensus       207 ~~gt~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t  242 (308)
T 4gt4_A          207 SLLPIRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFS  242 (308)
T ss_dssp             SCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccCCcccCHHHHhC-CCCCccchhhhHHHHHHHHHh
Confidence            000113566776654 556667799999999999986

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.76  E-value=2.1e-19  Score=185.31  Aligned_cols=126  Identities=15%  Similarity=0.104  Sum_probs=83.6

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhC--------CeEecCCCCCCEEEeeccccccccccc
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD--------NFIHADMHPGNILVRVAQKKSSQKRLF  478 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~--------G~~H~DlHPGNILV~~~~~~~~~~g~~  478 (581)
                      -+|||||++|++|.+++............++...+.+ +..+|.+        |++||||||.|||++       .+|  
T Consensus        76 ~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~g-l~ylH~~~~~~~~~~~IiHRDlKp~NILl~-------~~~--  145 (303)
T 3hmm_A           76 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG-LAHLHMEIVGTQGKPAIAHRDLKSKNILVK-------KNG--  145 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHH-HHHHHCCBCSTTCBCCEECSCCCGGGEEEC-------TTS--
T ss_pred             EEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHH-HHHHHHhhhhccCCCCEeeccCCcccEEEC-------CCC--
Confidence            4799999999999999875433222233444444333 7778876        999999999999999       777  


Q ss_pred             CCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc-----CCCCCCCHHHHHHHHHHhhhH
Q 008021          479 RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS-----KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       479 ~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~-----~~~~~~D~~~f~~~l~~l~~~  547 (581)
                          .++|+|||+++..+......... ....+-.-.+.++|.+....     .+....|.|+|+..+.|++++
T Consensus       146 ----~~Ki~DFGla~~~~~~~~~~~~~-~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg  214 (303)
T 3hmm_A          146 ----TCCIADLGLAVRHDSATDTIDIA-PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  214 (303)
T ss_dssp             ----CEEECCCTTCEEEETTTTEESCC------CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ----CEEEEeCCCCccccCCCCceeee-cccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHC
Confidence                89999999988764432110000 00111233567777775421     122346999999999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.76  E-value=3.6e-18  Score=193.15  Aligned_cols=195  Identities=15%  Similarity=0.083  Sum_probs=126.0

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||.|+||.||+|+.+.+       |+.||||+.....-   ..                    -.        
T Consensus       190 df~i~k~LG~G~fG~V~la~~~~t-------g~~~AiK~i~K~~i---~~--------------------~~--------  231 (689)
T 3v5w_A          190 DFSVHRIIGRGGFGEVYGCRKADT-------GKMYAMKCLDKKRI---KM--------------------KQ--------  231 (689)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT-------CCEEEEEEEEHHHH---HH--------------------TT--------
T ss_pred             HeEEEEEEecccCeEEEEEEECCC-------CCEEEEEEEeHHHc---ch--------------------hh--------
Confidence            355 58899999999999999876       79999999753200   00                    00        


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                           .+-...+|...+. .... .++++|  .+.+..+.  ..-+|||||++|++|.+++..... .......++..++
T Consensus       232 -----~~~~~~~E~~~l~-ll~~-~~HP~I--V~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl  302 (689)
T 3v5w_A          232 -----GETLALNERIMLS-LVST-GDCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII  302 (689)
T ss_dssp             -----CHHHHHHHHHHHH-HHSS-SCCTTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             -----hHHHHHHHHHHHH-HHhh-CCCCCE--eEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHH
Confidence                 0000111211111 1111 122332  23333232  344799999999999999865322 1112223344444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ ++.||..||+||||||+|||++       .+|      .++|+|||++..++......+       +-.-.|.++|.
T Consensus       303 ~a-L~yLH~~gIiHRDLKPeNILld-------~~G------~vKL~DFGlA~~~~~~~~~t~-------~GTp~YmAPEv  361 (689)
T 3v5w_A          303 LG-LEHMHNRFVVYRDLKPANILLD-------EHG------HVRISDLGLACDFSKKKPHAS-------VGTHGYMAPEV  361 (689)
T ss_dssp             HH-HHHHHTTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECSSCCCCSC-------CSCGGGCCHHH
T ss_pred             HH-HHHHHHCCccccCCchHHeEEe-------CCC------CEEecccceeeecCCCCCCCc-------cCCcCccCHHH
Confidence            33 8899999999999999999999       778      999999999998876543222       12335677777


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +..-..+....|.|+++..+.+++.+.
T Consensus       362 l~~~~~y~~~vDiWSLGvilYEmLtG~  388 (689)
T 3v5w_A          362 LQKGVAYDSSADWFSLGCMLFKLLRGH  388 (689)
T ss_dssp             HSTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            654334566789999999999999883

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.75  E-value=2.1e-18  Score=181.95  Aligned_cols=195  Identities=18%  Similarity=0.138  Sum_probs=123.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||.||+|+.+.+  ++...++.||||+.+.+....                                     
T Consensus        69 ~~~LG~G~fG~Vy~a~~~~~--~~~~~~k~VAvK~l~~~~~~~-------------------------------------  109 (353)
T 4ase_A           69 GKPLGRGAFGQVIEADAFGI--DKTATCRTVAVKMLKEGATHS-------------------------------------  109 (353)
T ss_dssp             EEEEEECSSEEEEEEEEETS--SSTTCEEEEEEEEECTTCCHH-------------------------------------
T ss_pred             eeEEecCCCeEEEEEEEcCC--CcccCCeEEEEEEEccccChH-------------------------------------
Confidence            57899999999999998753  222335899999987653211                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-cccccccCCCCcEEEEeccCCccHHHHHHhhhcc-----------------h
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-----------------E  430 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------------~  430 (581)
                       ..-+|.+|++.+.++.    .+++|. +-..+.+-..+-+|||||++|++|.+++......                 .
T Consensus       110 -~~~~~~~E~~il~~l~----hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~  184 (353)
T 4ase_A          110 -EHRALMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL  184 (353)
T ss_dssp             -HHHHHHHHHHHHHHHC----CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCH
T ss_pred             -HHHHHHHHHHHHHHcC----CCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCH
Confidence             0123556776666553    222221 1111111122347999999999999999653210                 1


Q ss_pred             hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          431 RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       431 ~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      .....++..++.+ +..||..|++||||||.|||++       .++      .++|+|||+++.+..+......    .-
T Consensus       185 ~~~~~~~~qia~g-l~yLH~~~iiHRDLK~~NILl~-------~~~------~vKi~DFGlar~~~~~~~~~~~----~~  246 (353)
T 4ase_A          185 EHLICYSFQVAKG-MEFLASRKCIHRDLAARNILLS-------EKN------VVKICDFGLARDIYKDPDYVRK----GD  246 (353)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCCGGGSCTTTCTTSEEE----TT
T ss_pred             HHHHHHHHHHHHH-HHhHhhCCeecCccCccceeeC-------CCC------CEEECcchhhhhcccCCCceee----cc
Confidence            1112334444433 7889999999999999999999       777      8999999999877543210000    00


Q ss_pred             Hhhc-HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          511 ARRD-GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       511 ~~~D-~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..+- .+.++|.+.. ..+....|.|+|+..+.|+++
T Consensus       247 ~~gt~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t  282 (353)
T 4ase_A          247 ARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS  282 (353)
T ss_dssp             EEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccCHHHHhc-CCCCCcccEeehHHHHHHHHh
Confidence            0111 2556666654 444556788888888888875

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.73  E-value=6.4e-17  Score=162.36  Aligned_cols=186  Identities=20%  Similarity=0.159  Sum_probs=120.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeE--EEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIV--VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~--VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      .++||+|++|+||+|+...+       |+.  ||||+.+++.... ..       .......-|.+.+..       ...
T Consensus        52 ~~~ig~G~~g~Vy~a~~~~~-------g~~~~vAvK~~~~~~~~~-~~-------~~~~~~~~~~~~~~~-------~~~  109 (258)
T 1zth_A           52 GGVISTGKEANVFYADGVFD-------GKPVAMAVKIYRIETSEF-DK-------MDEYLYGDERFDMRR-------ISP  109 (258)
T ss_dssp             EEEEEECSSEEEEEEEEEET-------TEEEEEEEEEECCC---------------GGGTTTCTTSCC-----------C
T ss_pred             CCEEeecceEEEEEEEEcCC-------CcEeeEEEEEEECCccch-hh-------HHHhhcccchhhhhc-------cCh
Confidence            47899999999999998543       688  9999988763211 00       000001112222211       001


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCC-----ccHHHHHHhhhcchhhHHHHHHHHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG-----ECVSRYVDELQGHERLKSALAHIGT  441 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G-----~~L~~~l~~~~~~~~~~~~la~~~i  441 (581)
                      .-..+..+.+|++++.++...     ++.+|.++.  ....+|||||+.+     .+|.++....  .......++..++
T Consensus       110 ~~~~~~~~~~E~~~l~~l~~~-----~i~~p~~~~--~~~~~lVmE~~g~~g~~~~~L~~~~~~~--~~~~~~~i~~qi~  180 (258)
T 1zth_A          110 KEKVFIWTEKEFRNLERAKEA-----GVSVPQPYT--YMKNVLLMEFIGEDELPAPTLVELGREL--KELDVEGIFNDVV  180 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-----TCCCCCEEE--EETTEEEEECCEETTEECCBHHHHGGGG--GGSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhC-----CCCCCeEEE--cCCCEEEEEecCCCCCccccHHHHhhcc--ChHHHHHHHHHHH
Confidence            112345677899999888643     466777774  3577999999942     3676653221  1112345555555


Q ss_pred             HHHHHHhh-hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          442 HALLKMLL-VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       442 ~a~l~~L~-~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      .+ +..+| ..|++|||+||+|||++       .        +++|+|||++..++......+       ..+|...+.+
T Consensus       181 ~~-l~~lH~~~givHrDlkp~NILl~-------~--------~~~liDFG~a~~~~~~~~~~~-------l~rd~~~~~~  237 (258)
T 1zth_A          181 EN-VKRLYQEAELVHADLSEYNIMYI-------D--------KVYFIDMGQAVTLRHPMAESY-------LERDVRNIIR  237 (258)
T ss_dssp             HH-HHHHHHTSCEECSSCSTTSEEES-------S--------SEEECCCTTCEETTSTTHHHH-------HHHHHHHHHH
T ss_pred             HH-HHHHHHHCCEEeCCCCHHHEEEc-------C--------cEEEEECcccccCCCccHHHH-------HHHHHHHHHH
Confidence            54 77899 99999999999999998       3        499999999998876654443       5788888888


Q ss_pred             HHHhhcCC
Q 008021          521 CTLRLSKQ  528 (581)
Q Consensus       521 ~ll~l~~~  528 (581)
                      .+.++|..
T Consensus       238 ~f~~~g~~  245 (258)
T 1zth_A          238 FFSKYGVK  245 (258)
T ss_dssp             HHHTTTCC
T ss_pred             HHHHcCCC
Confidence            88777644

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=2.4e-17  Score=170.65  Aligned_cols=224  Identities=18%  Similarity=0.217  Sum_probs=115.3

Q ss_pred             hcCCCCCCHHHHHHHHHHHhCCChhhhhccCCc----------eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecC
Q 008021          257 HSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEE----------APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP  326 (581)
Q Consensus       257 qd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~----------~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P  326 (581)
                      |++.+.-+.......++...|.++.+.+..|+.          +.||+|++|+||+|+.+.+ ++  ..+..||||+.++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~--~~~~~vavK~~~~   83 (333)
T 1mqb_A            7 HHHHDYDIPTTENLYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTS-SG--KKEVPVAIKTLKA   83 (333)
T ss_dssp             -------------------------------CCBCCTTTEEEEEEEEECSSSEEEEEEEEC------CCEEEEEEEEECT
T ss_pred             ccccccCCCCCccccccccccCChhhhhhhccccCChHHhhcccEEecCCCeEEEEEEEecC-CC--CccccEEEEEcCC
Confidence            567777778888888888888888888777765          8999999999999998753 11  1235799999876


Q ss_pred             CchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCC
Q 008021          327 GVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLV  404 (581)
Q Consensus       327 ~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~  404 (581)
                      +....                                      .+.++.+|++.+.++     .+++  +++.+.  ...
T Consensus        84 ~~~~~--------------------------------------~~~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~  118 (333)
T 1mqb_A           84 GYTEK--------------------------------------QRVDFLGEAGIMGQF-----SHHN--IIRLEGVISKY  118 (333)
T ss_dssp             TCCHH--------------------------------------HHHHHHHHHHHHHTC-----CCTT--BCCEEEEECSS
T ss_pred             CCCHH--------------------------------------HHHHHHHHHHHHHhC-----CCCC--CCcEEEEEecC
Confidence            53211                                      112345566555443     1233  233332  223


Q ss_pred             CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP  482 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~  482 (581)
                      ...++||||++|.+|.+++.....  .......++..++.+ +..||..|++|+|+||+||+++       .++      
T Consensus       119 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~a-L~~LH~~~ivH~Dikp~NIl~~-------~~~------  184 (333)
T 1mqb_A          119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG-MKYLANMNYVHRDLAARNILVN-------SNL------  184 (333)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEC-------TTC------
T ss_pred             CCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHH-HHHHHhCCeeCCCCChheEEEC-------CCC------
Confidence            456899999999999999865321  111223344444443 8889999999999999999998       667      


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHh-hcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVAR-RDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~-~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .++|+|||++..+...........   ... .-.+.+.|.+.. .......|.++|+..+.+++.
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt  245 (333)
T 1mqb_A          185 VCKVSDFGLSRVLEDDPEATYTTS---GGKIPIRWTAPEAISY-RKFTSASDVWSFGIVMWEVMT  245 (333)
T ss_dssp             CEEECCCCC--------------------CCCGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             cEEECCCCcchhhccccccccccC---CCCccccccCchhccc-CCCCchhhhHHHHHHHHHHHc
Confidence            899999999987765432221100   000 012455665532 333345688888888888776

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.71  E-value=2.7e-17  Score=173.56  Aligned_cols=217  Identities=18%  Similarity=0.117  Sum_probs=128.4

Q ss_pred             hhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHH
Q 008021          283 IFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV  361 (581)
Q Consensus       283 iF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v  361 (581)
                      +...|+ .+.||+|++|.||+|+.+.+       |+.||||+.........  +                          
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~vaiK~i~~~~~~~~--~--------------------------   51 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRT-------GEVVAVKKIFDAFQNST--D--------------------------   51 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTT-------CCEEEEEEECC--CCHH--H--------------------------
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCC-------CCEEEEEEecccccChH--H--------------------------
Confidence            444555 58999999999999999875       79999998754321100  0                          


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHH
Q 008021          362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQGHERLKSALA  437 (581)
Q Consensus       362 ~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la  437 (581)
                               ...+.+|...+.++    .+++++  ++.+.-+    ...-++||||++| +|.+++............++
T Consensus        52 ---------~~~~~~E~~~l~~l----~~h~ni--v~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~  115 (388)
T 3oz6_A           52 ---------AQRTFREIMILTEL----SGHENI--VNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVV  115 (388)
T ss_dssp             ---------HHHHHHHHHHHHHT----TTCTTB--CCEEEEEECTTSSCEEEEEECCSE-EHHHHHHHTCCCHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHHhc----cCCCCC--CeeeeEEecCCCCEEEEEecccCc-CHHHHHHcCCCCHHHHHHHH
Confidence                     01122344444333    223332  2222211    1234899999986 78887765322222233455


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh-------------H---H
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD-------------R---V  501 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~-------------r---~  501 (581)
                      ..++.+ ++.||..|++|||+||+|||++       .+|      .++|+|||++..+....             .   .
T Consensus       116 ~qi~~~-L~~LH~~~ivHrDlkp~NIll~-------~~~------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~  181 (388)
T 3oz6_A          116 YQLIKV-IKYLHSGGLLHRDMKPSNILLN-------AEC------HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD  181 (388)
T ss_dssp             HHHHHH-HHHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCTTCEESSSCCCCCCCGGGCCC-------
T ss_pred             HHHHHH-HHHHHhCCEEeCCCCHHHeEEc-------CCC------CEEecCCcccccccccccccccccccccccccccc
Confidence            455544 8899999999999999999998       677      89999999998653210             0   0


Q ss_pred             HHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          502 NLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       502 ~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      .-.......+...++.++|.+.....+....|.|++++.+.+++.+.  +......+.+..+...
T Consensus       182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~  246 (388)
T 3oz6_A          182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV  246 (388)
T ss_dssp             --------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            00111222234456788998876555666789999999999999873  4444555555554433

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.71  E-value=9.5e-18  Score=171.00  Aligned_cols=233  Identities=12%  Similarity=0.048  Sum_probs=124.3

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC----chhhHHHHHHHHHHHHHHhcccccccc----
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG----VGESIRRDFVIINLAAKISSVIPAVKW----  354 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~----v~~~i~~Dl~il~~la~~~~~~p~l~~----  354 (581)
                      ..+|+ .+.||+|++|+||+|+.+.+       |+.||||+.+..    ..+.+.+++.+++.+     ..|.+-.    
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~-------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~   72 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVD-------DCNYAIKRIRLPNRELAREKVMREVKALAKL-----EHPGIVRYFNA   72 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTT-------CCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-----CCTTBCCEEEE
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCC-------CcEEEEEEeecCCchhHHHHHHHHHHHHHhC-----CCCCEeeEEEE
Confidence            34455 57999999999999999864       799999998743    233445555555433     1232110    


Q ss_pred             ---cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc-------------cCCCCcEEEEeccCCcc
Q 008021          355 ---LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY-------------PLVHPAVLVETYEQGEC  418 (581)
Q Consensus       355 ---l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~-------------~l~t~~VLVmEyi~G~~  418 (581)
                         ..-....+++     .++....|..+...........+.+.++....             ......++||||++|.+
T Consensus        73 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~  147 (332)
T 3qd2_B           73 WLETPPEKWQEEM-----DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKEN  147 (332)
T ss_dssp             EEECCSCHHHHHH-----HC--------------------------------------------CCCEEEEEEECCCSSC
T ss_pred             EEEeccchhhhhh-----hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCC
Confidence               0111112211     11222222221111100000111111111000             00112479999999999


Q ss_pred             HHHHHHhhhcchhh----HHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc
Q 008021          419 VSRYVDELQGHERL----KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE  494 (581)
Q Consensus       419 L~~~l~~~~~~~~~----~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~  494 (581)
                      |.+++.........    ...++..++.+ +..||..|++|+|+||+||+++       .+|      .++|+|||++..
T Consensus       148 L~~~~~~~~~~~~~~~~~~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kL~DfG~a~~  213 (332)
T 3qd2_B          148 LKDWMNRRCSLEDREHGVCLHIFIQIAEA-VEFLHSKGLMHRDLKPSNIFFT-------MDD------VVKVGDFGLVTA  213 (332)
T ss_dssp             HHHHHHTCCSGGGSCHHHHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCTTCEE
T ss_pred             HHHHHhcccCccchhhHHHHHHHHHHHHH-HHHHHhCCeeecCCCcccEEEe-------CCC------CEEEeecCcccc
Confidence            99998653221111    23344444444 8889999999999999999998       667      899999999998


Q ss_pred             cCHhhHHHHH-HHH------HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          495 LSKTDRVNLV-EFF------KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       495 L~~~~r~~l~-~l~------~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ++......-. .-.      ......-.+.++|.+.. .......|.++++..+.+++.+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~~  273 (332)
T 3qd2_B          214 MDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLYSF  273 (332)
T ss_dssp             CSCC--------------CCCSCC-CGGGSCHHHHHC-CCCCTHHHHHHHHHHHHHHHSCC
T ss_pred             cccchhhccccccccccccccccCCCcCccChHHhcC-CCCcchhhHHHHHHHHHHHHHcC
Confidence            7664322110 000      00011224566666543 33445679999999999988653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.71  E-value=7.1e-17  Score=172.22  Aligned_cols=186  Identities=12%  Similarity=0.097  Sum_probs=115.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhh--HHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGES--IRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~--i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      ..+||+|++|.||+|...+        |++|||||.+++....  +..+          .+...   ........     
T Consensus       100 ~~~IG~Gk~a~VY~a~d~~--------G~~vAvKi~r~~~~sfr~v~~~----------r~~~~---~~~~~~~~-----  153 (397)
T 4gyi_A          100 GSRIGVGKESDIMIVADEK--------GKQKVLKIHRLGRISFRTVKAN----------RDYLR---NRSTGSWM-----  153 (397)
T ss_dssp             EEEEEECSSEEEEEEECTT--------CCEEEEEEECTTEECCCCCC------------CEECT---TSCHHHHH-----
T ss_pred             cCEeeeCCceEEEEEECCC--------CCEEEEEEEecccccHHHHHHH----------HHHHH---hhccccHH-----
Confidence            4789999999999999854        6999999998874321  0000          00000   00000000     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                       -...+.-..|.+|+.++...     ++.+|+|+  ...+.+|||||++|.++.++...     .....+...++.+ +.
T Consensus       154 -~~~rl~A~kE~~nL~rL~~~-----gv~vp~p~--~~~~~~LVME~i~G~~L~~l~~~-----~~~~~l~~qll~~-l~  219 (397)
T 4gyi_A          154 -YLSRLAAIKEFAFMKALYEE-----GFPVPEPI--AQSRHTIVMSLVDALPMRQVSSV-----PDPASLYADLIAL-IL  219 (397)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHT-----TCSCCCEE--EEETTEEEEECCSCEEGGGCCCC-----SCHHHHHHHHHHH-HH
T ss_pred             -HHHHHHHHHHHHHHHHHHhc-----CCCCCeee--eccCceEEEEecCCccHhhhccc-----HHHHHHHHHHHHH-HH
Confidence             11123335688899988654     56778877  34567999999999999875421     1223455555544 67


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      .+|..|+|||||||+|||+..+.....+++   ....+++|||+.+...+...-..|       ..+|...+.+-+-+
T Consensus       220 ~lH~~gIVHrDLKp~NILl~~dgd~~d~~~---~~~~~~iID~~Q~V~~~hp~a~~~-------l~RDv~ni~~fF~k  287 (397)
T 4gyi_A          220 RLAKHGLIHGDFNEFNILIREEKDAEDPSS---ITLTPIIIXFPQMVSMDHPNAEMY-------FDRDVQCIKRFFER  287 (397)
T ss_dssp             HHHHTTEECSCCSTTSEEEEEEECSSCTTS---EEEEEEECCCTTCEETTSTTHHHH-------HHHHHHHHHHHHHH
T ss_pred             HHHHCCCcCCCCCHHHEEEeCCCCcccccc---cccceEEEEeCCcccCCCCChHHH-------HHHHHHHHHHHHHh
Confidence            789999999999999999983211000000   011489999999887765443333       35566666555543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.70  E-value=5.3e-17  Score=168.60  Aligned_cols=199  Identities=17%  Similarity=0.125  Sum_probs=130.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.......                           ....       
T Consensus        20 ~~~lG~G~~g~V~~a~~~~~-------~~~vaiK~~~~~~~~---------------------------~~~~-------   58 (328)
T 3fe3_A           20 LKTIGKGNFAKVKLARHILT-------GREVAIKIIDKTQLN---------------------------PTSL-------   58 (328)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEEGGGSC---------------------------HHHH-------
T ss_pred             EEEEeeCCCEEEEEEEECCC-------CCEEEEEEEEhhcCC---------------------------HHHH-------
Confidence            58999999999999999765       799999997543110                           0000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|.+.+.++.     ++++  ++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        59 ---~~~~~E~~~l~~l~-----hpnI--v~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~a-l  127 (328)
T 3fe3_A           59 ---QKLFREVRIMKILN-----HPNI--VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA-V  127 (328)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTTB--CCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhCC-----CCCE--eeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence               11234555444331     2332  23332  223445899999999999998854322 122223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||+|||++       .+|      .++|+|||++..++......      .......+.++|.+...
T Consensus       128 ~~lH~~~ivHrDlkp~NIll~-------~~~------~~kl~DFG~a~~~~~~~~~~------~~~gt~~y~aPE~~~~~  188 (328)
T 3fe3_A          128 QYCHQKRIVHRDLKAENLLLD-------ADM------NIKIADFGFSNEFTVGGKLD------AFCGAPPYAAPELFQGK  188 (328)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEC-------TTS------CEEECSTTCCGGGSSSCGGG------TTSSSGGGCCHHHHHTC
T ss_pred             HHHHHCCEeccCCCHHHEEEc-------CCC------CEEEeeccCceecCCCCccc------cccCCcceeCcccccCC
Confidence            889999999999999999998       677      89999999998765433211      11233456778877654


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILL  558 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll  558 (581)
                      .......|.|+++..+.+++.+.  +...+..++.
T Consensus       189 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  223 (328)
T 3fe3_A          189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR  223 (328)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH
Confidence            43334679999999999998873  3444444443

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=5.4e-17  Score=170.84  Aligned_cols=204  Identities=19%  Similarity=0.127  Sum_probs=128.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|+||+|+...+       |+.||||+........                               ....  
T Consensus        30 ~~~lG~G~~g~V~~a~~~~~-------~~~vaiK~~~~~~~~~-------------------------------~~~~--   69 (367)
T 1cm8_A           30 LQPVGSGAYGAVCSAVDGRT-------GAKVAIKKLYRPFQSE-------------------------------LFAK--   69 (367)
T ss_dssp             EEEC------CEEEEEETTT-------CCEEEEEECSSTTSSH-------------------------------HHHH--
T ss_pred             eEEeeecCCeEEEEEEECCC-------CCEEEEEEeCccccCH-------------------------------HHHH--
Confidence            57899999999999999765       7999999875432110                               0011  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-ccccccc-----CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYP-----LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~-----l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~  442 (581)
                          .+.+|.+.+.++.     ++++. +-..+..     ..+.-++||||+ |.+|.+++............++..++.
T Consensus        70 ----~~~~E~~~l~~l~-----hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~  139 (367)
T 1cm8_A           70 ----RAYRELRLLKHMR-----HENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLK  139 (367)
T ss_dssp             ----HHHHHHHHHHHCC-----BTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHhCC-----CcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHH
Confidence                1234444444331     22211 1111111     112348999999 889999886532222222334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + ++.||..|++|+|+||+||+++       .+|      +++|+|||++...+.....        .....++.++|.+
T Consensus       140 ~-L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kl~Dfg~a~~~~~~~~~--------~~~t~~y~aPE~~  197 (367)
T 1cm8_A          140 G-LRYIHAAGIIHRDLKPGNLAVN-------EDC------ELKILDFGLARQADSEMTG--------YVVTRWYRAPEVI  197 (367)
T ss_dssp             H-HHHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCTTCEECCSSCCS--------SCSCGGGCCTHHH
T ss_pred             H-HHHHHHCCccccCcCHHHEEEc-------CCC------CEEEEeeecccccccccCc--------CcCCCCcCCHHHH
Confidence            4 8889999999999999999998       677      8999999999876543211        1223457788888


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      ..........|.|++++.+.+++.+.  +......+.+..+.+.
T Consensus       198 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~  241 (367)
T 1cm8_A          198 LNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKV  241 (367)
T ss_dssp             HTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             hCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            77566677889999999999999873  4555555555555443

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.69  E-value=1.1e-16  Score=168.16  Aligned_cols=194  Identities=19%  Similarity=0.100  Sum_probs=122.4

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      .+|+ .+.||+|++|.||+|+.+.+       |+.||||+.+.....   .+                       +    
T Consensus        23 ~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~~AvK~~~~~~~~---~~-----------------------~----   65 (353)
T 3txo_A           23 DNFEFIRVLGKGSFGKVMLARVKET-------GDLYAVKVLKKDVIL---QD-----------------------D----   65 (353)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEEHHHHH---HH-----------------------T----
T ss_pred             hheEEEEEEeeCCCEEEEEEEEcCC-------CCEEEEEEEEHHHhc---ch-----------------------h----
Confidence            3455 68899999999999999875       799999997643100   00                       0    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                            ..-.+..|.+.+.++    ..++.+  ++.+..  .....+|||||++|++|.+++..... .......++..+
T Consensus        66 ------~~~~~~~E~~il~~~----~~hp~I--v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi  133 (353)
T 3txo_A           66 ------DVECTMTEKRILSLA----RNHPFL--TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI  133 (353)
T ss_dssp             ------THHHHHHHHHHHHHT----TTCTTB--CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHhc----cCCCce--eeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHH
Confidence                  000112343333322    123333  233322  23445899999999999998865322 112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++||||||.|||++       .+|      .++|+|||++..........     ....-.-.+.++|
T Consensus       134 ~~a-L~~LH~~givHrDlkp~NILl~-------~~g------~ikL~DFG~a~~~~~~~~~~-----~~~~gt~~y~aPE  194 (353)
T 3txo_A          134 ISA-LMFLHDKGIIYRDLKLDNVLLD-------HEG------HCKLADFGMCKEGICNGVTT-----ATFCGTPDYIAPE  194 (353)
T ss_dssp             HHH-HHHHHHTTCBCCCCCGGGEEEC-------TTS------CEEECCCTTCBCSCC--------------CCGGGCCHH
T ss_pred             HHH-HHHHHHCCCcccCCCHHHEEEC-------CCC------CEEEccccceeecccCCccc-----cccCCCcCeEChh
Confidence            444 8889999999999999999998       677      89999999998643322111     1112233456677


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+... .+....|.|+++..+.+++.+
T Consensus       195 ~~~~~-~~~~~~DiwslG~il~ell~G  220 (353)
T 3txo_A          195 ILQEM-LYGPAVDWWAMGVLLYEMLCG  220 (353)
T ss_dssp             HHHHH-HCTTHHHHHHHHHHHHHHHHS
T ss_pred             hcCCC-CcCCccCCCcchHHHHHHHhC
Confidence            66543 344567999999999999877

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.69  E-value=2.6e-17  Score=184.03  Aligned_cols=192  Identities=17%  Similarity=0.195  Sum_probs=123.9

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      .+.|+ .+.||+|+||.||+|+.+.+       |+.||||+....-..    |                           
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~t-------g~~~AiK~i~~~~~~----~---------------------------  197 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERAT-------GNNFAAKFVMTPHES----D---------------------------  197 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEECCSHH----H---------------------------
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCC-------CCEEEEEEEeccchh----h---------------------------
Confidence            34455 57899999999999999876       799999987543110    0                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAH  438 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~  438 (581)
                        ..      .+.+|.+.+..+.     ++++.  +.+.  .....-+|||||++|++|.+++....+  .......+..
T Consensus       198 --~~------~~~~Ei~il~~l~-----hpnIv--~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~  262 (573)
T 3uto_A          198 --KE------TVRKEIQTMSVLR-----HPTLV--NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR  262 (573)
T ss_dssp             --HH------HHHHHHHHHHHTC-----CTTBC--CEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHH
T ss_pred             --HH------HHHHHHHHHHhCC-----CCCCC--eEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHH
Confidence              01      1234444444331     23321  2222  223445799999999999998853221  1122233444


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ ++.||..|++||||||.|||++..     ..|      .++|+|||+++.+++......      ..-.-.+.+
T Consensus       263 qi~~a-l~ylH~~~iiHRDlKp~Nill~~~-----~~~------~vKl~DFG~a~~~~~~~~~~~------~~GT~~y~A  324 (573)
T 3uto_A          263 QVCKG-LCHMHENNYVHLDLKPENIMFTTK-----RSN------ELKLIDFGLTAHLDPKQSVKV------TTGTAEFAA  324 (573)
T ss_dssp             HHHHH-HHHHHHTTEECCCCCGGGEEESSS-----SCC------CEEECCCSSCEECCTTSEEEE------ECSSGGGCC
T ss_pred             HHHHH-HHHHHHCCeeeccCChhhccccCC-----CCC------CEEEeeccceeEccCCCceee------eEECccccC
Confidence            44444 888999999999999999999711     235      899999999998876432110      011124567


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|.+.. ..+....|.|+++..+.+|+.+
T Consensus       325 PEv~~~-~~y~~~~DiWSlGvilyeml~G  352 (573)
T 3uto_A          325 PEVAEG-KPVGYYTDMWSVGVLSYILLSG  352 (573)
T ss_dssp             HHHHTT-CCBCHHHHHHHHHHHHHHHHHS
T ss_pred             HHHhCC-CCCCcHHHHHHHHHHHHHHHHC
Confidence            777654 3344567999999999998877

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.68  E-value=6.7e-16  Score=157.40  Aligned_cols=167  Identities=13%  Similarity=0.127  Sum_probs=109.0

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|+||+|+. .+       |+.||||+.+++.... .              ..+..+     +.+ .......
T Consensus        96 ~~iG~G~~g~Vy~~~~-~~-------g~~valK~~~~~~~~~-~--------------~~~~~~-----~~~-~~~w~~~  146 (282)
T 1zar_A           96 KLMGEGKESAVFNCYS-EK-------FGECVVKFHKVGHTSF-K--------------KVKEKR-----DYG-DLHFSVL  146 (282)
T ss_dssp             EEEEECSSEEEEEEEE-TT-------TEEEEEEEECC---------------------CCCC-------------CHHHH
T ss_pred             CEeccCCCceEEEEEe-CC-------CCEEEEEEEECCCCch-h--------------hhhhhh-----hhc-chhhHHH
Confidence            7999999999999999 43       6999999988652110 0              000000     000 0000011


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhh
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL  449 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~  449 (581)
                      ...++.+|.+.+.++.      . +.+|.++.  ....++||||++|.+|.+ +..     .....++..++.+ +..+|
T Consensus       147 ~~~~~~~E~~~l~~l~------~-~~v~~~~~--~~~~~lvmE~~~g~~L~~-l~~-----~~~~~i~~qi~~~-l~~lH  210 (282)
T 1zar_A          147 AIRSARNEFRALQKLQ------G-LAVPKVYA--WEGNAVLMELIDAKELYR-VRV-----ENPDEVLDMILEE-VAKFY  210 (282)
T ss_dssp             HHHHHHHHHHHHHHTT------T-SSSCCEEE--EETTEEEEECCCCEEGGG-CCC-----SCHHHHHHHHHHH-HHHHH
T ss_pred             HHHHHHHHHHHHHhcc------C-CCcCeEEe--ccceEEEEEecCCCcHHH-cch-----hhHHHHHHHHHHH-HHHHH
Confidence            2345677887777664      2 56666553  255699999999999998 321     1123455555554 78899


Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      ..|++|+|+||+|||++        +|      +++|+|||++...+......+       ..+|...+.+.+
T Consensus       211 ~~giiHrDlkp~NILl~--------~~------~vkl~DFG~a~~~~~~~a~e~-------l~rdv~~i~~~f  262 (282)
T 1zar_A          211 HRGIVHGDLSQYNVLVS--------EE------GIWIIDFPQSVEVGEEGWREI-------LERDVRNIITYF  262 (282)
T ss_dssp             HTTEECSCCSTTSEEEE--------TT------EEEECCCTTCEETTSTTHHHH-------HHHHHHHHHHHH
T ss_pred             HCCCEeCCCCHHHEEEE--------CC------cEEEEECCCCeECCCCCHHHH-------HHHHHHHHHHHH
Confidence            99999999999999998        23      899999999998766544332       356666666665

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.68  E-value=9.5e-17  Score=163.45  Aligned_cols=186  Identities=16%  Similarity=0.093  Sum_probs=122.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       |+.||||+....-...                          .          
T Consensus        25 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~--------------------------~----------   61 (297)
T 3fxz_A           25 FEKIGQGASGTVYTAMDVAT-------GQEVAIRQMNLQQQPK--------------------------K----------   61 (297)
T ss_dssp             CEEEEEETTEEEEEEEBTTT-------CCEEEEEEEEGGGCSC--------------------------H----------
T ss_pred             eeeeccCCCeEEEEEEECCC-------CcEEEEEEeecccccH--------------------------H----------
Confidence            57899999999999998764       7999999875431110                          0          


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                         -.+.+|...+.++     .+++  +++.+..  .....++||||++|.+|.+++............++..++.+ +.
T Consensus        62 ---~~~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~-l~  130 (297)
T 3fxz_A           62 ---ELIINEILVMREN-----KNPN--IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-LE  130 (297)
T ss_dssp             ---HHHHHHHHHHHHC-----CCTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHH-HH
T ss_pred             ---HHHHHHHHHHhcC-----CCCC--CCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHH-HH
Confidence               0123344433332     1232  3333322  23456899999999999999865332222333455555444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||+|||++       .+|      .++|+|||++..+++......     .......+.++|.+.. .
T Consensus       131 ~lH~~~i~H~Dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~-----~~~gt~~y~aPE~~~~-~  191 (297)
T 3fxz_A          131 FLHSNQVIHRDIKSDNILLG-------MDG------SVKLTDFGFCAQITPEQSKRS-----TMVGTPYWMAPEVVTR-K  191 (297)
T ss_dssp             HHHHTTEECCCCSGGGEEEC-------TTC------CEEECCCTTCEECCSTTCCBC-----CCCSCGGGCCHHHHHC-S
T ss_pred             HHHhCCceeCCCCHHHEEEC-------CCC------CEEEeeCCCceecCCcccccC-----CccCCcCccChhhhcC-C
Confidence            89999999999999999998       677      899999999887654322100     0011223556666543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.++|+..+.+++.+
T Consensus       192 ~~~~~~DiwslG~il~ell~g  212 (297)
T 3fxz_A          192 AYGPKVDIWSLGIMAIEMIEG  212 (297)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCcHHHHHHHHHHHHHHHhC
Confidence            344567999999999998876

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.67  E-value=6e-17  Score=171.09  Aligned_cols=195  Identities=13%  Similarity=0.123  Sum_probs=118.5

Q ss_pred             hhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          281 SEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       281 ~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      ...|.-...+.||+|++|+||+|+...+       |+.||||+.++.-..                              
T Consensus        86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~-------g~~vavK~~~~~~~~------------------------------  128 (373)
T 2x4f_A           86 NSFYTVSKTEILGGGRFGQVHKCEETAT-------GLKLAAKIIKTRGMK------------------------------  128 (373)
T ss_dssp             GGTEEEEEEEECC-----CEEEEEETTT-------CCEEEEEEEECCSHH------------------------------
T ss_pred             ccceeeecceEEecCcCEEEEEEEEcCC-------CcEEEEEEEcccccc------------------------------
Confidence            3334333367899999999999999765       799999998764210                              


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSAL  436 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~l  436 (581)
                               ..-.+.+|.+.+.++     .++++  ++.+.  ......+|||||++|.+|.+++.....  .......+
T Consensus       129 ---------~~~~~~~E~~~l~~l-----~hpnI--v~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i  192 (373)
T 2x4f_A          129 ---------DKEEVKNEISVMNQL-----DHANL--IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILF  192 (373)
T ss_dssp             ---------HHHHHHHHHHHHTTC-----CCTTB--CCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHH
T ss_pred             ---------cHHHHHHHHHHHHhC-----CCCCC--CeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHH
Confidence                     001234555555433     23332  33332  233456899999999999988754221  11222334


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +..++.+ +..||..|++|+||||+|||+...     .++      +++|+|||++..+.+......      ....-.+
T Consensus       193 ~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~~~-----~~~------~~kl~DFG~a~~~~~~~~~~~------~~gt~~y  254 (373)
T 2x4f_A          193 MKQICEG-IRHMHQMYILHLDLKPENILCVNR-----DAK------QIKIIDFGLARRYKPREKLKV------NFGTPEF  254 (373)
T ss_dssp             HHHHHHH-HHHHHHTTEECCCCCGGGEEEEET-----TTT------EEEECCCSSCEECCTTCBCCC------CCSSCTT
T ss_pred             HHHHHHH-HHHHHHCCcccccCCHHHEEEecC-----CCC------cEEEEeCCCceecCCcccccc------ccCCCcE
Confidence            4444443 888999999999999999999610     334      899999999987755432110      0112235


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++|.+. ........|.|+|+..+.+++.+
T Consensus       255 ~aPE~~~-~~~~~~~~DiwslG~il~elltg  284 (373)
T 2x4f_A          255 LAPEVVN-YDFVSFPTDMWSVGVIAYMLLSG  284 (373)
T ss_dssp             CCHHHHT-TCBCCHHHHHHHHHHHHHHHHHS
T ss_pred             eChhhcc-CCCCCcHHhHHHHHHHHHHHHhC
Confidence            5666542 23334456888888888888876

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.67  E-value=3.6e-16  Score=160.12  Aligned_cols=201  Identities=13%  Similarity=0.037  Sum_probs=130.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.++...+.+                                    
T Consensus        41 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~------------------------------------   77 (330)
T 3nsz_A           41 VRKLGRGKYSEVFEAINITN-------NEKVVVKILKPVKKKKI------------------------------------   77 (330)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEECSCCHHHH------------------------------------
T ss_pred             EEEecccCCeEEEEEEECCC-------CcEEEEEEecccchHHH------------------------------------
Confidence            57899999999999998764       79999999876543332                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--c--CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--P--LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~--l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                            .+|.+.+.++.    .++++  ++.+.  .  .....++||||++|.+|.+++...  .......++..++.+ 
T Consensus        78 ------~~E~~~l~~l~----~~~~i--~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~qi~~~-  142 (330)
T 3nsz_A           78 ------KREIKILENLR----GGPNI--ITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL--TDYDIRFYMYEILKA-  142 (330)
T ss_dssp             ------HHHHHHHHHHT----TSTTB--CCEEEEEECTTTCCEEEEEECCCCCCHHHHGGGC--CHHHHHHHHHHHHHH-
T ss_pred             ------HHHHHHHHHcC----CCCCE--EEeeeeeccCCCCceEEEEeccCchhHHHHHHhC--CHHHHHHHHHHHHHH-
Confidence                  23444443332    12222  12211  1  133458999999999999887432  122223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||+|||++       .++     ..++|+|||++..+.+......      ......+.+.|.+..
T Consensus       143 l~~lH~~~ivH~Dikp~Nil~~-------~~~-----~~~kl~Dfg~a~~~~~~~~~~~------~~~~~~y~aPE~~~~  204 (330)
T 3nsz_A          143 LDYCHSMGIMHRDVKPHNVMID-------HEH-----RKLRLIDWGLAEFYHPGQEYNV------RVASRYFKGPELLVD  204 (330)
T ss_dssp             HHHHHHTTEECCCCSGGGEEEE-------TTT-----TEEEECCCTTCEECCTTCCCCS------CCSCGGGCCHHHHTT
T ss_pred             HHHHHhCCeeeCCCCHHHEEEc-------CCC-----CEEEEEeCCCceEcCCCCcccc------ccccccccChhhhcC
Confidence            8889999999999999999998       332     1799999999987654322110      012234667777765


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh---hccccHHHHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV---LRRVIWSILLSACSNYL  565 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~---~~~~~~~~ll~~~~~~l  565 (581)
                      ........|.++++..+.+++.+.   .......+.+..+.+.+
T Consensus       205 ~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~  248 (330)
T 3nsz_A          205 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL  248 (330)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred             CCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhc
Confidence            455566779999999999998873   23334444444444443

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.66  E-value=6.5e-16  Score=156.90  Aligned_cols=204  Identities=17%  Similarity=0.086  Sum_probs=130.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+........                               ...   
T Consensus         8 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~-------------------------------~~~---   46 (311)
T 4agu_A            8 IGKIGEGSYGVVFKCRNRDT-------GQIVAIKKFLESEDDP-------------------------------VIK---   46 (311)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEECCCCC-H-------------------------------HHH---
T ss_pred             eeEEeecCCeEEEEEEeCCC-------CcEEEEEEeeccccch-------------------------------HHH---
Confidence            57899999999999999875       7999999875542110                               000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|++.+.++.     +++  +++.+..  .....++||||++|.++.++...... .......++..++.+ +
T Consensus        47 ---~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~-l  115 (311)
T 4agu_A           47 ---KIALREIRMLKQLK-----HPN--LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQA-V  115 (311)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTT--BCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhCC-----CCC--ccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHH-H
Confidence               11234555554432     232  2333322  23445899999999999988754221 122223445444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+||+++       .+|      .++|+|||++..+.......     ........+.++|.+...
T Consensus       116 ~~lH~~~ivH~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~  177 (311)
T 4agu_A          116 NFCHKHNCIHRDVKPENILIT-------KHS------VIKLCDFGFARLLTGPSDYY-----DDEVATRWYRSPELLVGD  177 (311)
T ss_dssp             HHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECC-----------------GGGCCHHHHHTC
T ss_pred             HHHHHCCCcCCCCChhhEEEc-------CCC------CEEEeeCCCchhccCccccc-----CCCcCCccccChHHHhcC
Confidence            889999999999999999998       667      89999999998776432211     111234456778887654


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACS  562 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~  562 (581)
                      .......|.++++..+.+++.+.  +......+.+..+.
T Consensus       178 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  216 (311)
T 4agu_A          178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR  216 (311)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            55556779999999999999873  33334444444333

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.66  E-value=3.7e-16  Score=161.42  Aligned_cols=190  Identities=14%  Similarity=0.117  Sum_probs=112.2

Q ss_pred             CceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       288 d~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      ..++||+|++|.||+|+.+.+       |+.||||+........                                    
T Consensus        15 ~~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~------------------------------------   51 (325)
T 3kn6_A           15 KDKPLGEGSFSICRKCVHKKS-------NQAFAVKIISKRMEAN------------------------------------   51 (325)
T ss_dssp             TSCCSEEETTEEEEEEEETTT-------CCEEEEEEEEGGGHHH------------------------------------
T ss_pred             CCCccccCCCeEEEEEEECCC-------CCEEEEEEEChhhhhh------------------------------------
Confidence            358999999999999999875       7999999975542221                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                            +.+|...+.++    .+++++.-..-+.......++||||++|.+|.+++..... .......++..++.+ +.
T Consensus        52 ------~~~e~~~l~~l----~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~-l~  120 (325)
T 3kn6_A           52 ------TQKEITALKLC----EGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA-VS  120 (325)
T ss_dssp             ------HHHHHHHHHHT----TTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHH-HH
T ss_pred             ------HHHHHHHHHHh----cCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-HH
Confidence                  12233333322    1233322111122223445799999999999998865321 122223444444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||+||+++       .++   ....++|+|||++..........-     .......+.++|.+.. .
T Consensus       121 ~LH~~~ivH~Dlkp~NIll~-------~~~---~~~~~kl~Dfg~a~~~~~~~~~~~-----~~~~t~~y~aPE~~~~-~  184 (325)
T 3kn6_A          121 HMHDVGVVHRDLKPENLLFT-------DEN---DNLEIKIIDFGFARLKPPDNQPLK-----TPCFTLHYAAPELLNQ-N  184 (325)
T ss_dssp             HHHHTTEECCCCCGGGEEEE-------C-------CEEEECCCTTCEECCC----------------------------C
T ss_pred             HHHHCCCeecCCCHHHEEEe-------cCC---CcccEEEeccccceecCCCCCccc-----ccCCCcCccCHHHhcC-C
Confidence            89999999999999999998       221   122799999999986654332211     1112344566776543 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.|+++..+.+++.+
T Consensus       185 ~~~~~~DiwslG~il~~ll~g  205 (325)
T 3kn6_A          185 GYDESCDLWSLGVILYTMLSG  205 (325)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCccchHHHHHHHHHHHhC
Confidence            334456999999999998876

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.66  E-value=2.6e-16  Score=165.82  Aligned_cols=204  Identities=19%  Similarity=0.102  Sum_probs=117.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|.||+|+...+       |+.||||+.........                                    
T Consensus        34 ~~~lG~G~~g~V~~a~~~~~-------~~~vaiK~~~~~~~~~~------------------------------------   70 (367)
T 2fst_X           34 LSPVGSGAYGSVCAAFDTKT-------GLRVAVKKLSRPFQSII------------------------------------   70 (367)
T ss_dssp             EEECC----CCEEEEEETTT-------TEEEEEEECSSTTSSHH------------------------------------
T ss_pred             eeEEeecCCeEEEEEEECCC-------CCEEEEEEeCccccCHH------------------------------------
Confidence            57999999999999998765       79999999765421100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-cccccc-----cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVY-----PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~-----~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~  442 (581)
                       ..-.+.+|.+.+.++.     ++++. +-..+.     +....-++||||+ |.+|.+++............++..++.
T Consensus        71 -~~~~~~~E~~~l~~l~-----hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~  143 (367)
T 2fst_X           71 -HAKRTYRELRLLKHMK-----HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILR  143 (367)
T ss_dssp             -HHHHHHHHHHHHHHCC-----CTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHhCC-----CCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHH
Confidence             0011233444443331     22221 111111     1123458999999 778988875422222223345555544


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..||..|++|+|+||+||+++       .+|      .++|+|||++.......        .......++.++|.+
T Consensus       144 a-L~~LH~~givH~Dlkp~NIll~-------~~~------~~kL~DFG~a~~~~~~~--------~~~~~t~~y~aPE~~  201 (367)
T 2fst_X          144 G-LKYIHSADIIHRDLKPSNLAVN-------EDC------ELKILDFGLARHTADEM--------TGYVATRWYRAPEIM  201 (367)
T ss_dssp             H-HHHHHHTTCCCCCCCGGGEEEC-------TTC------CEEECC-----------------------CCCTTCCHHHH
T ss_pred             H-HHHHHHCCeeeCCCCHhhEEEC-------CCC------CEEEeeccccccccccC--------CCcCcCcCccChHHH
Confidence            4 8889999999999999999998       677      89999999998765432        122345567888888


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      ..........|.|++++.+.+++.+.  +...+..+.+..+.+.
T Consensus       202 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~  245 (367)
T 2fst_X          202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL  245 (367)
T ss_dssp             TTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            76556667789999999999999883  4555555555555443

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.66  E-value=4.6e-17  Score=165.59  Aligned_cols=216  Identities=19%  Similarity=0.153  Sum_probs=115.7

Q ss_pred             HHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhH
Q 008021          253 LSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI  332 (581)
Q Consensus       253 L~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i  332 (581)
                      |+.+|++.||  ...+++.-++.++....+.|+-  .+.||+|++|.||+|+...+       |+.||||+.+..-.   
T Consensus         2 l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~y~~--~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~---   67 (314)
T 3com_A            2 LETVQLRNPP--RRQLKKLDEDSLTKQPEEVFDV--LEKLGEGSYGSVYKAIHKET-------GQIVAIKQVPVESD---   67 (314)
T ss_dssp             ------------------------------CEEE--EEECC----CEEEEEEETTT-------CCEEEEEEEETTSC---
T ss_pred             ccccccCCCC--ccchhhcCchhhhhcchhhhhh--heeeccCCCeEEEEEEECCC-------CCEEEEEecCchHH---
Confidence            5677888887  3456667677777666665542  46899999999999999765       69999998765311   


Q ss_pred             HHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEE
Q 008021          333 RRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLV  410 (581)
Q Consensus       333 ~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLV  410 (581)
                                              .              -++.+|...+.++     .+++  +++.+..+  ....++|
T Consensus        68 ------------------------~--------------~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv  102 (314)
T 3com_A           68 ------------------------L--------------QEIIKEISIMQQC-----DSPH--VVKYYGSYFKNTDLWIV  102 (314)
T ss_dssp             ------------------------C--------------HHHHHHHHHHHTC-----CCTT--BCCEEEEEEETTEEEEE
T ss_pred             ------------------------H--------------HHHHHHHHHHHhC-----CCCC--CccEEEEEEeCCEEEEE
Confidence                                    0              0123344433322     1222  33333222  3445899


Q ss_pred             EeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEe
Q 008021          411 ETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD  488 (581)
Q Consensus       411 mEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiD  488 (581)
                      |||++|.+|.+++.....  .......++..++.+ +..||..|++|+|+||.||+++       .+|      +++|+|
T Consensus       103 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~-l~~lH~~~i~H~dl~p~Nil~~-------~~~------~~kl~d  168 (314)
T 3com_A          103 MEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG-LEYLHFMRKIHRDIKAGNILLN-------TEG------HAKLAD  168 (314)
T ss_dssp             EECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEC-------TTC------CEEECC
T ss_pred             eecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHHHHhCCCcCCCcCHHHEEEC-------CCC------CEEEee
Confidence            999999999999863221  122223344444444 7889999999999999999998       667      899999


Q ss_pred             cccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          489 VGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       489 FGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ||++..+........     .......+.++|.+.. .......|.++|+..+.+++.+
T Consensus       169 fg~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g  221 (314)
T 3com_A          169 FGVAGQLTDTMAKRN-----TVIGTPFWMAPEVIQE-IGYNCVADIWSLGITAIEMAEG  221 (314)
T ss_dssp             CTTCEECBTTBSCBC-----CCCSCGGGCCHHHHSS-SCBCTTHHHHHHHHHHHHHHHS
T ss_pred             cccchhhhhhccccC-----ccCCCCCccChhhcCC-CCCCccccHHHHHHHHHHHHhC
Confidence            999976654311000     0001123455555533 2334566888888888888876

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.66  E-value=4.1e-15  Score=155.40  Aligned_cols=200  Identities=14%  Similarity=0.097  Sum_probs=109.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  .....++.||||+.++.....+                                    
T Consensus        70 ~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~vavK~~~~~~~~~~------------------------------------  111 (365)
T 3e7e_A           70 HHLLGEGAFAQVYEATQGDL--NDAKNKQKFVLKVQKPANPWEF------------------------------------  111 (365)
T ss_dssp             EEEEEECSSEEEEEEEC---------CCCCEEEEEESSCCHHHH------------------------------------
T ss_pred             EEEeeccCCEEEEEEEecCC--cccccCcEEEEEEeCCCChhHH------------------------------------
Confidence            36799999999999964321  0112279999999887633222                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc------chhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG------HERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~------~~~~~~~la~~~  440 (581)
                            ..|.+.+.++....  ++.  +...+.  ......+|||||++|++|.+++.....      .......++..+
T Consensus       112 ------~~e~~~~~~l~~~~--~~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi  181 (365)
T 3e7e_A          112 ------YIGTQLMERLKPSM--QHM--FMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRM  181 (365)
T ss_dssp             ------HHHHHHHHHSCGGG--GGG--BCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHhhhhh--hhh--hhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHH
Confidence                  22332232222110  111  222222  223456899999999999999864211      111223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccc----cccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKK----SSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~----~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +.+ +..||..|++|||+||+|||++.....    ...++      .++|+|||++..+........   .....-...+
T Consensus       182 ~~~-L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~------~~kl~DFG~a~~~~~~~~~~~---~~~~~gt~~y  251 (365)
T 3e7e_A          182 LYM-IEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSA------GLALIDLGQSIDMKLFPKGTI---FTAKCETSGF  251 (365)
T ss_dssp             HHH-HHHHHTTTEECCCCSGGGEEECGGGTCC------CT------TEEECCCTTCEEGGGSCTTEE---ECCSSCTTSC
T ss_pred             HHH-HHHHhhCCeecCCCCHHHEEecccccCccccccccC------CEEEeeCchhhhhhccCCCce---eeeecCCCCC
Confidence            444 888999999999999999999821000    00144      899999999965421100000   0000112234


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.|.+.. .......|.|+|+..+.+++++
T Consensus       252 ~aPE~~~~-~~~~~~~DiwslG~il~elltg  281 (365)
T 3e7e_A          252 QCVEMLSN-KPWNYQIDYFGVAATVYCMLFG  281 (365)
T ss_dssp             CCHHHHTT-CCBSTHHHHHHHHHHHHHHHHS
T ss_pred             CChHHhcC-CCCCccccHHHHHHHHHHHHhC
Confidence            44554433 2233445666666666666554

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.66  E-value=5.3e-16  Score=157.89  Aligned_cols=191  Identities=15%  Similarity=0.108  Sum_probs=119.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+..+.-.+                             .        
T Consensus        15 ~~~lG~G~~g~V~~~~~~~~-------~~~va~K~~~~~~~~-----------------------------~--------   50 (310)
T 3s95_A           15 GEVLGKGCFGQAIKVTHRET-------GEVMVMKELIRFDEE-----------------------------T--------   50 (310)
T ss_dssp             EEEEECCSSEEEEEEEETTT-------CCEEEEEEESCCCHH-----------------------------H--------
T ss_pred             cceecCCCCEEEEEEEECCC-------CcEEEEEEeccCCHH-----------------------------H--------
Confidence            57899999999999999865       799999986543110                             0        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        .-.|.+|++.+.++     .+++  +++.+.-  .....++||||++|.+|.+++.....  .......++..++.+ 
T Consensus        51 --~~~~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~a-  120 (310)
T 3s95_A           51 --QRTFLKEVKVMRCL-----EHPN--VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG-  120 (310)
T ss_dssp             --HHHHHHHHHHHTTC-----CCTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhC-----CCcC--cccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH-
Confidence              11234565555433     1232  2333322  23456899999999999999865222  112223445454444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHH--HHHH-------HHHhhcH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV--EFFK-------AVARRDG  515 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~--~l~~-------Al~~~D~  515 (581)
                      +..||..|++|+|+||+||+++       .++      .++|+|||++..+.......-.  ..-.       .....-.
T Consensus       121 l~~lH~~~ivH~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  187 (310)
T 3s95_A          121 MAYLHSMNIIHRDLNSHNCLVR-------ENK------NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY  187 (310)
T ss_dssp             HHHHHHTTEECSCCSTTSEEEC-------TTS------CEEECCCTTCEECC--------------------CCCCSCGG
T ss_pred             HHHHHhCCccCCCCCcCeEEEC-------CCC------CEEEeecccceecccccccccccccccccccccccccCCCcc
Confidence            8889999999999999999998       667      8999999999877554322110  0000       0001122


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.+.|.+.. .......|.++|+..+.+++.+
T Consensus       188 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g  218 (310)
T 3s95_A          188 WMAPEMING-RSYDEKVDVFSFGIVLCEIIGR  218 (310)
T ss_dssp             GCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHT
T ss_pred             eeCHHHhcC-CCCCcHHHHHHHHHHHHHHhcC
Confidence            456666533 3334456888888888888755

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.66  E-value=3.2e-16  Score=168.43  Aligned_cols=192  Identities=16%  Similarity=0.076  Sum_probs=124.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+........                                   
T Consensus        31 ~~~lG~G~~g~V~~a~~~~~-------~~~vAiK~~~~~~~~~~~-----------------------------------   68 (432)
T 3n9x_A           31 KHLIGRGSYGYVYLAYDKNT-------EKNVAIKKVNRMFEDLID-----------------------------------   68 (432)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------TEEEEEEEECSTTTSHHH-----------------------------------
T ss_pred             EEEEeecCCEEEEEEEECCC-------CcEEEEEEeCchhcChHH-----------------------------------
Confidence            57899999999999999875       799999997654221100                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC-------CCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV-------HPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~-------t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                        .-.+.+|.+.+.++.     ++++  .+.+.-+.       ..-++||||++| +|.+++..... .......++..+
T Consensus        69 --~~~~~~E~~~l~~l~-----h~nI--v~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qi  138 (432)
T 3n9x_A           69 --CKRILREITILNRLK-----SDYI--IRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNL  138 (432)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTB--CCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHHSSCCCCHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHcC-----CCCc--ceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHhccCCCCHHHHHHHHHHH
Confidence              012334555554432     2222  22221111       345899999987 88888764221 122223444444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHH----------------
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV----------------  504 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~----------------  504 (581)
                      +.+ ++.||..|++|+||||+|||++       .+|      .++|+|||++..+.........                
T Consensus       139 l~a-L~~LH~~givHrDlkp~NILl~-------~~~------~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (432)
T 3n9x_A          139 LLG-ENFIHESGIIHRDLKPANCLLN-------QDC------SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL  204 (432)
T ss_dssp             HHH-HHHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCTTCEEC-------------------------
T ss_pred             HHH-HHHHHHCCCCCCCCCHHHeEEC-------CCC------CEEEccCCCcccccccccccccccccccccccccccch
Confidence            444 8889999999999999999998       677      8999999999987654332111                


Q ss_pred             -HHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          505 -EFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       505 -~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       ..+...+...++.++|.++.-..+....|.|++++.+.+++.
T Consensus       205 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~  247 (432)
T 3n9x_A          205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN  247 (432)
T ss_dssp             ------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHT
T ss_pred             hccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHh
Confidence             112222334567888988766667677899999999999995

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.65  E-value=2.1e-16  Score=169.63  Aligned_cols=194  Identities=15%  Similarity=0.110  Sum_probs=123.1

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|.||+|+.+.+       |+.||||+.+....         ..             .-.        
T Consensus        70 ~y~~~~~LG~G~fG~V~~~~~~~~-------~~~~AiK~~~k~~~---------~~-------------~~~--------  112 (410)
T 3v8s_A           70 DYEVVKVIGRGAFGEVQLVRHKST-------RKVYAMKLLSKFEM---------IK-------------RSD--------  112 (410)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT-------CCEEEEEEEEHHHH---------HH-------------TCC--------
T ss_pred             ccEEEEEEEcCCCEEEEEEEECCC-------CcEEEEEEEehhhh---------hh-------------hHH--------
Confidence            344 57899999999999999875       79999999753200         00             000        


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH  442 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~  442 (581)
                            +-.+.+|...+..+     ++++  +.+.+..+  ...-+|||||++|++|.+++....-.......++..++.
T Consensus       113 ------~~~~~~E~~il~~l-----~hp~--Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~  179 (410)
T 3v8s_A          113 ------SAFFWEERDIMAFA-----NSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL  179 (410)
T ss_dssp             ------CSTHHHHHHHHHHC-----CCTT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHhC-----CCCC--CCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHH
Confidence                  00123344333322     2232  22333222  234579999999999999886533222223334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..||..|++||||||+|||++       .+|      .++|+|||++..+........    ....-.-.+.++|.+
T Consensus       180 a-L~~LH~~givHrDLKp~NILl~-------~~g------~ikL~DFG~a~~~~~~~~~~~----~~~~gt~~Y~APE~l  241 (410)
T 3v8s_A          180 A-LDAIHSMGFIHRDVKPDNMLLD-------KSG------HLKLADFGTCMKMNKEGMVRC----DTAVGTPDYISPEVL  241 (410)
T ss_dssp             H-HHHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECCTTSEEEC----CSCCSCGGGCCHHHH
T ss_pred             H-HHHHHHCCeEeccCCHHHeeEC-------CCC------CEEEeccceeEeeccCCcccc----cCCcCCccccCHHHh
Confidence            4 8889999999999999999998       777      899999999987654321000    000122345677776


Q ss_pred             HhhcC---CCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSK---QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~---~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....   +....|.|+|+..+.+++.+
T Consensus       242 ~~~~~~~~~~~~~DiwSlGvilyell~G  269 (410)
T 3v8s_A          242 KSQGGDGYYGRECDWWSVGVFLYEMLVG  269 (410)
T ss_dssp             HTTTTTCEEETHHHHHHHHHHHHHHHHS
T ss_pred             hccCCCcCCCCcceEecchHHHHHHHhC
Confidence            65432   33467889999999888876

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.65  E-value=5.4e-16  Score=157.42  Aligned_cols=190  Identities=18%  Similarity=0.188  Sum_probs=121.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+........                          .+..       
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~--------------------------~~~~-------   55 (294)
T 4eqm_A           16 VDKLGGGGMSTVYLAEDTIL-------NIKVAIKAIFIPPREK--------------------------EETL-------   55 (294)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CSEEEEEEEECCSSCC--------------------------HHHH-------
T ss_pred             EEEEccCCCEEEEEEEECCC-------CCeEEEEEeccCcccc--------------------------HHHH-------
Confidence            57899999999999998764       7999999875432110                          0111       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|+..+.++     .+++  +++.+.  +.....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        56 ---~~~~~e~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~-l  124 (294)
T 4eqm_A           56 ---KRFEREVHNSSQL-----SHQN--IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDG-I  124 (294)
T ss_dssp             ---HHHHHHHHHHTTC-----CBTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHhcC-----CCCC--CceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               1234455544333     1222  333332  223445899999999999999865321 222223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||+||+++       .+|      +++|+|||++..+++.......    .....-.+.++|.+.. 
T Consensus       125 ~~lH~~~i~H~Dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~----~~~gt~~y~aPE~~~~-  186 (294)
T 4eqm_A          125 KHAHDMRIVHRDIKPQNILID-------SNK------TLKIFDFGIAKALSETSLTQTN----HVLGTVQYFSPEQAKG-  186 (294)
T ss_dssp             HHHHHTTCCCCCCCGGGEEEC-------TTS------CEEECCCSSSTTC-----------------CCSSCCHHHHHT-
T ss_pred             HHHHHCCcccCCCCHHHEEEC-------CCC------CEEEEeCCCccccccccccccC----ccccCccccCHhHhcC-
Confidence            889999999999999999998       667      8999999999877654322111    1122334566666644 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++++..+.+++.+
T Consensus       187 ~~~~~~~Di~slG~~l~~ll~g  208 (294)
T 4eqm_A          187 EATDECTDIYSIGIVLYEMLVG  208 (294)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHHS
T ss_pred             CCCCchHhHHHHHHHHHHHHhC
Confidence            3344567999999999999876

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.65  E-value=2e-16  Score=162.12  Aligned_cols=212  Identities=13%  Similarity=0.085  Sum_probs=131.7

Q ss_pred             hhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          281 SEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       281 ~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      +.+...|+ .+.||+|++|.||+|+...        |+.||||+.+......                            
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~----------------------------   60 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQ--------GRIVALKRIRLDAEDE----------------------------   60 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEETT--------SCEEEEEEEC----------------------------------
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEECC--------CCEEEEEEEecccccc----------------------------
Confidence            34455555 6889999999999999854        6999999876541100                            


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc--chhhHHH
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG--HERLKSA  435 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~  435 (581)
                         ..      .-.+.+|.+.+.++.     +++  +++.+.-+  ....++||||++| ++.+++.....  .......
T Consensus        61 ---~~------~~~~~~E~~~l~~l~-----hp~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~  123 (311)
T 3niz_A           61 ---GI------PSTAIREISLLKELH-----HPN--IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKI  123 (311)
T ss_dssp             ---CH------HHHHHHHHHHHHHCC-----CTT--BCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHH
T ss_pred             ---hh------hHHHHHHHHHHHHcC-----CCC--EeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHH
Confidence               00      012234555554431     233  22333222  2345899999998 66666643221  1112233


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      ++..++.+ +..||..|++|+|+||+|||++       .+|      .++|+|||++..++......-     .....-.
T Consensus       124 ~~~qi~~~-l~~LH~~~ivH~Dikp~NIl~~-------~~~------~~kl~Dfg~a~~~~~~~~~~~-----~~~~t~~  184 (311)
T 3niz_A          124 YLYQLLRG-VAHCHQHRILHRDLKPQNLLIN-------SDG------ALKLADFGLARAFGIPVRSYT-----HEVVTLW  184 (311)
T ss_dssp             HHHHHHHH-HHHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCTTCEETTSCCC--------CCCCCCT
T ss_pred             HHHHHHHH-HHHHHHCCcccCCCchHhEEEC-------CCC------CEEEccCcCceecCCCccccc-----CCcccCC
Confidence            44444443 8889999999999999999998       677      899999999987653221110     0012334


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      +.++|.+..........|.|+++..+.+++.+.  +......+.+..+...
T Consensus       185 y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  235 (311)
T 3niz_A          185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI  235 (311)
T ss_dssp             TCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHH
T ss_pred             cCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            677787765445556779999999999999873  4444444555555444

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.65  E-value=1.5e-16  Score=160.70  Aligned_cols=207  Identities=13%  Similarity=0.063  Sum_probs=130.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......                           +..       
T Consensus         7 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~---------------------------~~~-------   45 (292)
T 3o0g_A            7 LEKIGEGTYGTVFKAKNRET-------HEIVALKRVRLDDDDE---------------------------GVP-------   45 (292)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------CCEEEEEEEESSCSST---------------------------THH-------
T ss_pred             eeEecCCCCeEEEEEEECCC-------CceEEEEeeeccCCcC---------------------------Ccc-------
Confidence            57899999999999999875       7999999987542110                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|...+.++     .+++  +.+.+.  ......++||||++|..+..+...... .......++..++.+ +
T Consensus        46 ---~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~-l  114 (292)
T 3o0g_A           46 ---SSALREICLLKEL-----KHKN--IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG-L  114 (292)
T ss_dssp             ---HHHHHHHHHHTTC-----CCTT--BCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHH-H
T ss_pred             ---hHHHHHHHHHhcC-----CCCC--EeeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH-H
Confidence               1123344444332     1222  223322  223445899999998655544332111 122223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+||+++       .+|      .++|+|||++..++......     ......-.+.++|.+...
T Consensus       115 ~~lH~~~ivH~dikp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~  176 (292)
T 3o0g_A          115 GFCHSRNVLHRDLKPQNLLIN-------RNG------ELKLANFGLARAFGIPVRCY-----SAEVVTLWYRPPDVLFGA  176 (292)
T ss_dssp             HHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECCSCCSCC-----CSCCSCGGGCCHHHHTTC
T ss_pred             HHHHhCCeecCCCCHHHEEEc-------CCC------CEEEeecccceecCCccccc-----cCCccccCCcChHHHcCC
Confidence            889999999999999999998       677      89999999998664321110     000112346677777654


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH---hhccccHHHHHHHHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG---VLRRVIWSILLSACSNYL  565 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~---~~~~~~~~~ll~~~~~~l  565 (581)
                      .......|.++++..+.+++.+   .+......+.+..+.+.+
T Consensus       177 ~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~  219 (292)
T 3o0g_A          177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL  219 (292)
T ss_dssp             SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHH
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh
Confidence            4455677999999999999965   355666667776666554

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=1.8e-16  Score=163.57  Aligned_cols=191  Identities=17%  Similarity=0.183  Sum_probs=121.5

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      ++.++ .+.||+|++|.||+|+.+.+       |+.||+|+....-.+                                
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~-------~~~~a~K~~~~~~~~--------------------------------   44 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSS-------KKTYMAKFVKVKGTD--------------------------------   44 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEECCCTHH--------------------------------
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCC-------CcEEEEEEEecCccc--------------------------------
Confidence            34444 57899999999999999875       799999987643110                                


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAH  438 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~  438 (581)
                              +..+.+|...+.++     .++++  ++.+.  ......++||||++|.+|.+++.....  .......++.
T Consensus        45 --------~~~~~~E~~~l~~l-----~hpnI--v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~  109 (321)
T 1tki_A           45 --------QVLVKKEISILNIA-----RHRNI--LHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVH  109 (321)
T ss_dssp             --------HHHHHHHHHHHHHS-----CCTTB--CCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHHhC-----CCCCC--CeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHH
Confidence                    11234455544433     13332  23332  223456899999999999998854221  1222233444


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ +..||..|++|+|+||+|||++..     .++      .++|+|||++..+.+.....      .....-.+.+
T Consensus       110 qi~~a-l~~lH~~givH~Dlkp~NIl~~~~-----~~~------~~kl~Dfg~a~~~~~~~~~~------~~~gt~~y~a  171 (321)
T 1tki_A          110 QVCEA-LQFLHSHNIGHFDIRPENIIYQTR-----RSS------TIKIIEFGQARQLKPGDNFR------LLFTAPEYYA  171 (321)
T ss_dssp             HHHHH-HHHHHHTTEECCCCCGGGEEESSS-----SCC------CEEECCCTTCEECCTTCEEE------EEESCGGGSC
T ss_pred             HHHHH-HHHHHHCCCCcCCCCHHHEEEccC-----CCC------CEEEEECCCCeECCCCCccc------cccCChhhcC
Confidence            44444 888999999999999999999810     145      89999999998775432110      0001123455


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|.+.. .......|.|+++..+.+++.+
T Consensus       172 PE~~~~-~~~~~~~DiwslG~il~~ll~g  199 (321)
T 1tki_A          172 PEVHQH-DVVSTATDMWSLGTLVYVLLSG  199 (321)
T ss_dssp             HHHHTT-CEECHHHHHHHHHHHHHHHHHS
T ss_pred             cHHhcC-CCCCchhhHHHHHHHHHHHHhC
Confidence            555533 2234456888888888888876

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.65  E-value=3.9e-16  Score=159.39  Aligned_cols=197  Identities=18%  Similarity=0.169  Sum_probs=118.7

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      ...|+ .+.||+|++|+||+|+...+       |+.||||+.+.+....                          .+.. 
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~--------------------------~~~~-   56 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRD-------HRDVAVKVLRADLARD--------------------------PSFY-   56 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEECTTTTTS--------------------------HHHH-
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCC-------CceEEEEEeCccccCC--------------------------HHHH-
Confidence            33444 68899999999999998764       7999999987653211                          0000 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCc----EEEEeccCCccHHHHHHhhhc-chhhHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPA----VLVETYEQGECVSRYVDELQG-HERLKSA  435 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~----VLVmEyi~G~~L~~~l~~~~~-~~~~~~~  435 (581)
                               ..+.+|++.+.++     .++  .+++.+....  ...    ++||||++|.+|.+++..... .......
T Consensus        57 ---------~~~~~E~~~l~~l-----~hp--~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~  120 (311)
T 3ork_A           57 ---------LRFRREAQNAAAL-----NHP--AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE  120 (311)
T ss_dssp             ---------HHHHHHHTTCCCC-----CCT--TBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHH
T ss_pred             ---------HHHHHHHHHHHcC-----CCC--CcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHH
Confidence                     1233444333221     122  2333332211  222    899999999999999865321 1222233


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      ++..++.+ +..+|..|++|+|+||+||+++       .++      .++|+|||++..+........  ..........
T Consensus       121 ~~~qi~~~-l~~lH~~~ivH~dlkp~Nil~~-------~~~------~~kl~Dfg~a~~~~~~~~~~~--~~~~~~gt~~  184 (311)
T 3ork_A          121 VIADACQA-LNFSHQNGIIHRDVKPANIMIS-------ATN------AVKVMDFGIARAIADSGNSVT--QTAAVIGTAQ  184 (311)
T ss_dssp             HHHHHHHH-HHHHHHTTCCCCCCCGGGEEEE-------TTS------CEEECCCSCC--------------------CCT
T ss_pred             HHHHHHHH-HHHHHHCCCCcCCCCHHHEEEc-------CCC------CEEEeeccCcccccccccccc--cccccCcCcc
Confidence            44444443 8889999999999999999998       667      899999999987755322111  0111222344


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.+.|.+.. .......|.++|+..+.+++.+
T Consensus       185 y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~g  215 (311)
T 3ork_A          185 YLSPEQARG-DSVDARSDVYSLGCVLYEVLTG  215 (311)
T ss_dssp             TCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cCCHHHhcC-CCCCchHhHHHHHHHHHHHHhC
Confidence            566666543 3334456899999999998876

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.65  E-value=8.6e-16  Score=154.12  Aligned_cols=194  Identities=16%  Similarity=0.192  Sum_probs=122.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCC--CCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQ--KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~--~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      .+.||+|++|.||+|+.+.+  |+  ...+..||||+....-...                                   
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~--~~~~~~~~~~va~K~~~~~~~~~-----------------------------------   55 (289)
T 4fvq_A           13 NESLGQGTFTKIFKGVRREV--GDYGQLHETEVLLKVLDKAHRNY-----------------------------------   55 (289)
T ss_dssp             EEEEEEETTEEEEEEEEEEE--CGGGCEEEEEEEEEEECGGGGGG-----------------------------------
T ss_pred             eeeeccCCCceEEEEEEecc--cccccccchhhhhhhcccccHHH-----------------------------------
Confidence            57899999999999998764  10  0012579999875431110                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTH  442 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~  442 (581)
                          .-.+.+|+..+.++.     ++++  ++.+.  ......++||||++|.+|.+++.....  .......++..++.
T Consensus        56 ----~~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~  124 (289)
T 4fvq_A           56 ----SESFFEAASMMSKLS-----HKHL--VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAA  124 (289)
T ss_dssp             ----HHHHHHHHHHHHTSC-----CTTB--CCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHhCC-----CCCE--eEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence                012334554444331     2332  22222  223456899999999999999865332  11222334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccc--cCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL--FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~--~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      + +..||..|++|+|+||+||+++       .++.  ..+.+.++|+|||++....+....         ...-.+.++|
T Consensus       125 ~-L~~LH~~~ivH~Dlkp~NIll~-------~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~---------~~~~~y~aPE  187 (289)
T 4fvq_A          125 A-MHFLEENTLIHGNVCAKNILLI-------REEDRKTGNPPFIKLSDPGISITVLPKDIL---------QERIPWVPPE  187 (289)
T ss_dssp             H-HHHHHHTTCCCCCCCGGGEEEE-------ECCBGGGTBCCEEEECCCCSCTTTSCHHHH---------HHTTTTSCHH
T ss_pred             H-HHHHhhCCeECCCcCcceEEEe-------cCCcccccccceeeeccCcccccccCcccc---------CCcCcccCHH
Confidence            4 8889999999999999999998       3320  001124999999999876554321         1223466777


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+..........|.++|+..+.+++.+
T Consensus       188 ~~~~~~~~~~~~DiwslG~il~el~~g  214 (289)
T 4fvq_A          188 CIENPKNLNLATDKWSFGTTLWEICSG  214 (289)
T ss_dssp             HHHCGGGCCHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCCCchhHHHHHHHHHHHHHcC
Confidence            776544455567899999999998874

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.65  E-value=1.3e-16  Score=172.67  Aligned_cols=194  Identities=16%  Similarity=0.133  Sum_probs=123.2

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|.||+|+++.+       |+.||||+.+....         ..             ..         
T Consensus        75 ~y~~~~~LG~G~fG~V~~~~~~~~-------~~~vAvK~~~~~~~---------~~-------------~~---------  116 (437)
T 4aw2_A           75 DFEILKVIGRGAFGEVAVVKLKNA-------DKVFAMKILNKWEM---------LK-------------RA---------  116 (437)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEEEHHHH---------HH-------------TT---------
T ss_pred             heEEEEEEEeCCCEEEEEEEEcCC-------CcEEEEEEEEHHHh---------hh-------------HH---------
Confidence            344 57999999999999999875       79999999753200         00             00         


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIG  440 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~  440 (581)
                           ..-.+.+|...+..+     +++.+  .+.+..  .....+|||||++|++|.+++.....  .......++..+
T Consensus       117 -----~~~~~~~E~~il~~~-----~hp~I--v~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi  184 (437)
T 4aw2_A          117 -----ETACFREERDVLVNG-----DSKWI--TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM  184 (437)
T ss_dssp             -----TTCCHHHHHHHHHHS-----CTTTB--CCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHhC-----CCCCE--EEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHH
Confidence                 001133344433322     22222  222222  23345899999999999999865221  112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++||||||+|||++       .+|      .++|+|||++..+........    ....-.-.+.++|
T Consensus       185 ~~a-L~~LH~~giiHrDLKp~NILl~-------~~g------~vkL~DFGla~~~~~~~~~~~----~~~~GT~~Y~APE  246 (437)
T 4aw2_A          185 VIA-IDSVHQLHYVHRDIKPDNILMD-------MNG------HIRLADFGSCLKLMEDGTVQS----SVAVGTPDYISPE  246 (437)
T ss_dssp             HHH-HHHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECCTTSCEEC----CSCCSCGGGCCHH
T ss_pred             HHH-HHHHHhCCeEecccCHHHeeEc-------CCC------CEEEcchhhhhhcccCCCccc----ccccCCcCeeChH
Confidence            443 8889999999999999999998       677      899999999977654321100    0001123466777


Q ss_pred             HHHhh----cCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRL----SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l----~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+...    +.+....|.|+|+..+.+++.+
T Consensus       247 ~l~~~~~~~~~~~~~~DvwSlGvil~elltG  277 (437)
T 4aw2_A          247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYG  277 (437)
T ss_dssp             HHHHHHTSCCEECTHHHHHHHHHHHHHHHHS
T ss_pred             HHhhcccCCCCCCCcCeeHHHHHHHHHHHhC
Confidence            77642    3345567999999999999877

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.64  E-value=3.6e-16  Score=161.64  Aligned_cols=189  Identities=17%  Similarity=0.161  Sum_probs=121.8

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|.||+|+.+.+       |+.||||+.+......                       ..        
T Consensus         7 ~y~~~~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~-----------------------~~--------   48 (318)
T 1fot_A            7 DFQILRTLGTGSFGRVHLIRSRHN-------GRYYAMKVLKKEIVVR-----------------------LK--------   48 (318)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTT-------CCEEEEEEEEHHHHHH-----------------------TT--------
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCC-------CCEEEEEEEEHHHhhh-----------------------hh--------
Confidence            344 57899999999999999865       7999999976431000                       00        


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                           ..-.+.+|...+..+     .+++  +++.+..+  ...-++||||++|++|.+++..... .......++..++
T Consensus        49 -----~~~~~~~E~~~l~~l-----~hp~--Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~  116 (318)
T 1fot_A           49 -----QVEHTNDERLMLSIV-----THPF--IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC  116 (318)
T ss_dssp             -----CHHHHHHHHHHHHSC-----CBTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHhhC-----CCCC--CceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHH
Confidence                 000122343333221     2222  23333222  2345799999999999999865321 1122233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+|+||+|||++       .+|      .++|+|||++..++.....        ....-.+.+.|.
T Consensus       117 ~a-L~~LH~~~ivHrDlkp~NIll~-------~~g------~~kL~Dfg~a~~~~~~~~~--------~~gt~~y~aPE~  174 (318)
T 1fot_A          117 LA-LEYLHSKDIIYRDLKPENILLD-------KNG------HIKITDFGFAKYVPDVTYT--------LCGTPDYIAPEV  174 (318)
T ss_dssp             HH-HHHHHTTTEECCCCCGGGEEEC-------TTS------CEEECCCSSCEECSSCBCC--------CCSCTTTCCHHH
T ss_pred             HH-HHHHHHCCccccCCChheEEEc-------CCC------CEEEeecCcceecCCcccc--------ccCCccccCHhH
Confidence            43 8889999999999999999998       677      8999999999876543210        011223556666


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. .......|.|+++..+.+++.+
T Consensus       175 ~~~-~~~~~~~DiwslG~il~ell~g  199 (318)
T 1fot_A          175 VST-KPYNKSIDWWSFGILIYEMLAG  199 (318)
T ss_dssp             HTT-CCBCTTHHHHHHHHHHHHHHHS
T ss_pred             hcC-CCCCcccchhhhHHHHHHHHhC
Confidence            543 3445577999999999999877

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.64  E-value=8.5e-16  Score=157.59  Aligned_cols=195  Identities=20%  Similarity=0.183  Sum_probs=118.8

Q ss_pred             hhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          280 LSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       280 ~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      ++-.+.+|+ .+.||+|++|.||+|+..         |+.||||+.......                           .
T Consensus        32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~~---------~~~vavK~~~~~~~~---------------------------~   75 (309)
T 3p86_A           32 MDIPWCDLNIKEKIGAGSFGTVHRAEWH---------GSDVAVKILMEQDFH---------------------------A   75 (309)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEET---------TEEEEEEEECCCCCS---------------------------H
T ss_pred             ccCChhHceeeeEeecCCCeEEEEEEEC---------CCcEEEEEecCCCCC---------------------------H
Confidence            333344555 679999999999999873         589999997654211                           0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc----chhh
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG----HERL  432 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~----~~~~  432 (581)
                      +..          -.+.+|++.+.++.     ++++  ++.+.  ......++||||++|.+|.+++.....    ....
T Consensus        76 ~~~----------~~~~~E~~~l~~l~-----hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  138 (309)
T 3p86_A           76 ERV----------NEFLREVAIMKRLR-----HPNI--VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR  138 (309)
T ss_dssp             HHH----------HHHHHHHHHHHHCC-----CTTB--CCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHH
T ss_pred             HHH----------HHHHHHHHHHHhCC-----CCCE--eeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHH
Confidence            111          12345665555442     2332  23332  223345899999999999999864321    1111


Q ss_pred             HHHHHHHHHHHHHHHhhhCC--eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          433 KSALAHIGTHALLKMLLVDN--FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~~~G--~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      ...++..++.+ +..||..|  ++|+|+||+||+++       .++      .++|+|||++..........     ...
T Consensus       139 ~~~i~~qi~~a-L~~LH~~~~~ivH~Dikp~NIll~-------~~~------~~kL~Dfg~a~~~~~~~~~~-----~~~  199 (309)
T 3p86_A          139 RLSMAYDVAKG-MNYLHNRNPPIVHRNLKSPNLLVD-------KKY------TVKVCDFGLSRLKASTFLSS-----KSA  199 (309)
T ss_dssp             HHHHHHHHHHH-HHHHHTSSSCCCCTTCCGGGEEEC-------TTC------CEEECCCC--------------------
T ss_pred             HHHHHHHHHHH-HHHHHcCCCCEECCCCChhhEEEe-------CCC------cEEECCCCCCcccccccccc-----ccC
Confidence            22344444443 88899999  99999999999998       667      89999999987554332111     111


Q ss_pred             HhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       511 ~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ...-.+.+.|.+.. .......|.++|+..+.+++.+
T Consensus       200 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg  235 (309)
T 3p86_A          200 AGTPEWMAPEVLRD-EPSNEKSDVYSFGVILWELATL  235 (309)
T ss_dssp             --CCTTSCHHHHTT-CCCCTTHHHHHHHHHHHHHHHC
T ss_pred             CCCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhC
Confidence            22334566676643 3344567999999999998876

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.64  E-value=1.2e-15  Score=151.92  Aligned_cols=184  Identities=18%  Similarity=0.130  Sum_probs=119.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...        ++.||||+.+++....                                     
T Consensus        15 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~-------------------------------------   49 (269)
T 4hcu_A           15 VQEIGSGQFGLVHLGYWLN--------KDKVAIKTIREGAMSE-------------------------------------   49 (269)
T ss_dssp             EEEEEECSSCEEEEEEETT--------TEEEEEEEECTTSBCH-------------------------------------
T ss_pred             eheecCCCccEEEEEEecC--------CCeEEEEEecccccCH-------------------------------------
Confidence            5789999999999999865        5889999987652110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                         -++.+|++.+.++.     +++  +++.+.  ......++||||++|.+|.+++.....  .......++..++.+ 
T Consensus        50 ---~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~-  118 (269)
T 4hcu_A           50 ---EDFIEEAEVMMKLS-----HPK--LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG-  118 (269)
T ss_dssp             ---HHHHHHHHHHHTCC-----CTT--BCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHH-
T ss_pred             ---HHHHHHHHHHHhCC-----CCC--EeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHH-
Confidence               12345555554432     232  333332  223456899999999999999865322  112223344444443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||.||+++       .++      .++|+|||++..............    ...-.+.++|.+..
T Consensus       119 l~~lH~~~i~H~dikp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~~~----~~~~~y~aPE~~~~  181 (269)
T 4hcu_A          119 MAYLEEACVIHRDLAARNCLVG-------ENQ------VIKVSDFGMTRFVLDDQYTSSTGT----KFPVKWASPEVFSF  181 (269)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEEC-------GGG------CEEECCTTGGGGBCCHHHHSTTST----TCCGGGCCHHHHHH
T ss_pred             HHHHHhCCeecCCcchheEEEc-------CCC------CEEeccccccccccccccccccCc----ccccccCCHHHhcC
Confidence            8889999999999999999998       667      899999999987655432211000    00012455555532


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       .......|.++++..+.+++.
T Consensus       182 -~~~~~~~Di~slG~~l~~ll~  202 (269)
T 4hcu_A          182 -SRYSSKSDVWSFGVLMWEVFS  202 (269)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCCCchhhhHHHHHHHHHHhc
Confidence             334445688888888888776

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.64  E-value=9.1e-17  Score=161.32  Aligned_cols=128  Identities=13%  Similarity=0.068  Sum_probs=84.0

Q ss_pred             CcEEEEeccCCccHHHHHHhhhcch--hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          406 PAVLVETYEQGECVSRYVDELQGHE--RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~~~--~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      ..++||||++|.+|.+++.......  .....++..++.+ +..||..|++|+|+||.||+++       .+|      .
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~-l~~LH~~~i~H~dlkp~Nil~~-------~~~------~  154 (303)
T 1zy4_A           89 TLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA-LSYIHSQGIIHRDLKPMNIFID-------ESR------N  154 (303)
T ss_dssp             EEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEC-------TTS------C
T ss_pred             ceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHH-HHHHHhCCeecccCCHHhEEEc-------CCC------C
Confidence            4579999999999999986422111  1122344444444 8889999999999999999998       667      8


Q ss_pred             EEEEecccccccCHhhHHHH---------HHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNL---------VEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l---------~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++..+.......-         ............+.++|.+...+......|.++|+..+.+++.+
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p  227 (303)
T 1zy4_A          155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP  227 (303)
T ss_dssp             EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSC
T ss_pred             EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhc
Confidence            99999999987653321000         00111122233456677765444555667999999999998864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.64  E-value=6.3e-16  Score=160.64  Aligned_cols=210  Identities=16%  Similarity=0.045  Sum_probs=128.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.+..-.                                  ..   
T Consensus        40 ~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~----------------------------------~~---   75 (360)
T 3llt_A           40 IRKMGDGTFGRVLLCQHIDN-------KKYYAVKVVRNIKK----------------------------------YT---   75 (360)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEECSCHH----------------------------------HH---
T ss_pred             EEEEcccCCeEEEEEEECCC-------CeEEEEEEeccchh----------------------------------hh---
Confidence            57899999999999999764       79999999764210                                  00   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                         -++..|...+.++...--.++  .+++.+.  ......+|||||+ |.+|.+++.....   .......++..++.+
T Consensus        76 ---~~~~~e~~~l~~l~~~~~~h~--~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~a  149 (360)
T 3llt_A           76 ---RSAKIEADILKKIQNDDINNN--NIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKA  149 (360)
T ss_dssp             ---HHHHHHHHHHHHTCCCSTTGG--GBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             ---hhhHHHHHHHHHhcccCCCCC--CeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence               011234444433321100122  2223322  2234568999999 8899998865331   112223344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeeccccc------------------ccccccCCCCeEEEEecccccccCHhhHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKS------------------SQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE  505 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~------------------~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~  505 (581)
                       +..||..|++|+|+||+|||++......                  ..++      .++|+|||++...+.....    
T Consensus       150 -L~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~kl~DFG~a~~~~~~~~~----  218 (360)
T 3llt_A          150 -LNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKST------GIKLIDFGCATFKSDYHGS----  218 (360)
T ss_dssp             -HHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCC------CEEECCCTTCEETTSCCCS----
T ss_pred             -HHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCC------CEEEEeccCceecCCCCcC----
Confidence             8889999999999999999997210000                  0133      8999999999865442211    


Q ss_pred             HHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          506 FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       506 l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                          ....-.+.++|.+.. .......|.|+++..+.+++.+.  +......+.+..+..+
T Consensus       219 ----~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  274 (360)
T 3llt_A          219 ----IINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESI  274 (360)
T ss_dssp             ----CCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             ----ccCcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHh
Confidence                112234667777754 34556789999999999999873  4444445555444443

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.64  E-value=3e-16  Score=160.57  Aligned_cols=191  Identities=16%  Similarity=0.118  Sum_probs=122.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......                        .    .+      
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~------------------------~----~~------   52 (319)
T 4euu_A           14 SDILGQGATANVFRGRHKKT-------GDLFAIKVFNNISFLR------------------------P----VD------   52 (319)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEECGGGGGS------------------------C----HH------
T ss_pred             EEEecCCCCeEEEEEEECCC-------CcEEEEEEeccccccc------------------------h----HH------
Confidence            57899999999999999875       6999999976431100                        0    00      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCC--CCcEEEEeccCCccHHHHHHhhhc----chhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLV--HPAVLVETYEQGECVSRYVDELQG----HERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~--t~~VLVmEyi~G~~L~~~l~~~~~----~~~~~~~la~~~  440 (581)
                          .+.+|++.+.++.     +++  +++.+.  ...  ...+|||||++|.+|.+++.....    .......++..+
T Consensus        53 ----~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi  121 (319)
T 4euu_A           53 ----VQMREFEVLKKLN-----HKN--IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV  121 (319)
T ss_dssp             ----HHHHHHHHHHHCC-----CTT--BCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHhcC-----CCC--cceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHH
Confidence                1234554444431     222  222221  111  244899999999999999865322    112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||.|||+...+.   .++      .++|+|||++..+.......      .......+.++|
T Consensus       122 ~~~-L~~LH~~~ivH~Dlkp~NIll~~~~~---~~~------~~kL~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE  185 (319)
T 4euu_A          122 VGG-MNHLRENGIVHRNIKPGNIMRVIGED---GQS------VYKLTDFGAARELEDDEQFV------SLYGTEEYLHPD  185 (319)
T ss_dssp             HHH-HHHHHHTTEECSCCSGGGEEEEECTT---SCE------EEEECCCTTCEECCTTCCBC------CCCSCGGGCCHH
T ss_pred             HHH-HHHHHHCCEecCCCCHHHEEEeccCC---CCc------eEEEccCCCceecCCCCcee------ecccCCCccCHH
Confidence            444 88899999999999999999852211   344      79999999998776543211      011233566777


Q ss_pred             HHHhh-------cCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRL-------SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l-------~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+...       .......|.|+|+..+.+++.+
T Consensus       186 ~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g  219 (319)
T 4euu_A          186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG  219 (319)
T ss_dssp             HHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             HhhhccccccccCCCCcHHHHHHHHHHHHHHHhC
Confidence            76542       3344567999999999999887

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.64  E-value=2.8e-16  Score=161.80  Aligned_cols=205  Identities=14%  Similarity=0.095  Sum_probs=127.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+........                                   
T Consensus         7 ~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~-----------------------------------   44 (324)
T 3mtl_A            7 LDKLGEGTYATVYKGKSKLT-------DNLVALKEIRLEHEEGAP-----------------------------------   44 (324)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEECC------C-----------------------------------
T ss_pred             EEEEcCCCCEEEEEEEECCC-------CcEEEEEEEecccccccc-----------------------------------
Confidence            57899999999999999865       799999997654211000                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                         .++.+|.+.+.++     .+++  +++.+.  ......++||||++| ++.+++.....  .......++..++.+ 
T Consensus        45 ---~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~a-  112 (324)
T 3mtl_A           45 ---CTAIREVSLLKDL-----KHAN--IVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRG-  112 (324)
T ss_dssp             ---CCCCCCHHHHSCC-----CCTT--BCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHH-
T ss_pred             ---hhHHHHHHHHHhc-----CCCC--CCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHH-
Confidence               0011233333222     1222  233332  223455899999997 77777754322  111223344444443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||+||+++       .+|      .++|+|||++...+......     ......-.+.++|.+..
T Consensus       113 L~~LH~~~ivH~Dikp~NIl~~-------~~~------~~kl~Dfg~a~~~~~~~~~~-----~~~~~t~~y~aPE~~~~  174 (324)
T 3mtl_A          113 LAYCHRQKVLHRDLKPQNLLIN-------ERG------ELKLADFGLARAKSIPTKTY-----DNEVVTLWYRPPDILLG  174 (324)
T ss_dssp             HHHHHHTTEEESSCCGGGEEEC-------TTC------CEEECSSSEEECC-----------------CGGGCCHHHHTT
T ss_pred             HHHHHHCCccCCCcCHHHEEEC-------CCC------CEEEccCcccccccCCcccc-----ccccCcccccChhhhcC
Confidence            8889999999999999999998       667      89999999998665432211     11122445677887765


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNYL  565 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~l  565 (581)
                      ........|.++++..+.+++.+.  +......+.+..+.+.+
T Consensus       175 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  217 (324)
T 3mtl_A          175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL  217 (324)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            444556679999999999999883  55556666666665543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.64  E-value=2.4e-16  Score=165.63  Aligned_cols=194  Identities=16%  Similarity=0.056  Sum_probs=120.6

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      .+|+ .+.||+|++|.||+|+.+.+       |+.||||+.+......                      .-.    .  
T Consensus        20 ~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~~AiK~~~~~~~~~----------------------~~~----~--   64 (353)
T 2i0e_A           20 TDFNFLMVLGKGSFGKVMLSERKGT-------DELYAVKILKKDVVIQ----------------------DDD----V--   64 (353)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTE-------EEEEEEEEEEHHHHHH----------------------TTC----H--
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCC-------CCEEEEEEEEHHHhhc----------------------chH----H--
Confidence            3455 57899999999999999875       6999999976431000                      000    0  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                              -.+..|.+.+..    ...++.  +++.+..  .....++||||++|++|.+++..... .......++..+
T Consensus        65 --------~~~~~E~~~l~~----~~~hp~--iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi  130 (353)
T 2i0e_A           65 --------ECTMVEKRVLAL----PGKPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI  130 (353)
T ss_dssp             --------HHHHHHHHHHTC----TTCCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHh----cCCCCE--EeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHH
Confidence                    011223332221    112232  2233322  23455899999999999998865322 112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||+|||++       .+|      .++|+|||++..........     ....-.-.+.++|
T Consensus       131 ~~a-L~~LH~~givHrDlkp~NIll~-------~~g------~vkL~DFG~a~~~~~~~~~~-----~~~~gt~~y~aPE  191 (353)
T 2i0e_A          131 AIG-LFFLQSKGIIYRDLKLDNVMLD-------SEG------HIKIADFGMCKENIWDGVTT-----KTFCGTPDYIAPE  191 (353)
T ss_dssp             HHH-HHHHHHTTCBCCCCCGGGEEEC-------TTS------CEEECCCTTCBCCCCTTCCB-----CCCCSCGGGCCHH
T ss_pred             HHH-HHHHHHCCEEeccCCHHHEEEc-------CCC------cEEEEeCCcccccccCCccc-----ccccCCccccChh
Confidence            444 8889999999999999999998       677      89999999988643211000     0001122355666


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.. .......|.|+++..+.+++.+
T Consensus       192 ~~~~-~~~~~~~DiwslG~il~ell~G  217 (353)
T 2i0e_A          192 IIAY-QPYGKSVDWWAFGVLLYEMLAG  217 (353)
T ss_dssp             HHTT-CCBSTHHHHHHHHHHHHHHHHS
T ss_pred             hhcC-CCcCCcccccchHHHHHHHHcC
Confidence            6543 3344567999999999998877

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.64  E-value=1.7e-15  Score=156.47  Aligned_cols=207  Identities=15%  Similarity=0.083  Sum_probs=129.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+..+.-...                                     
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~-------------------------------------   51 (353)
T 2b9h_A           16 KSLLGEGAYGVVCSATHKPT-------GEIVAIKKIEPFDKPL-------------------------------------   51 (353)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEECCCSSHH-------------------------------------
T ss_pred             eeEEcCCCCeEEEEEEECCC-------CcEEEEEeecccccch-------------------------------------
Confidence            57899999999999999865       7999999986542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-------CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-------LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-------l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i  441 (581)
                       ...++.+|.+.+.++.     ++++  ++.+.-       .....++||||++| +|.+++............++..++
T Consensus        52 -~~~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~qi~  122 (353)
T 2b9h_A           52 -FALRTLREIKILKHFK-----HENI--ITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTL  122 (353)
T ss_dssp             -HHHHHHHHHHHHHHCC-----CTTB--CCEEEECCCSCSTTCCCEEEEECCCSE-EHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHhCc-----CCCc--CCeeeeecccccCccceEEEEEeccCc-cHHHHHhhcCCCHHHHHHHHHHHH
Confidence             0112334555554431     2222  222211       12445899999986 788887653222222334454444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHH-----HHHHHhhcHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF-----FKAVARRDGR  516 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l-----~~Al~~~D~~  516 (581)
                      .+ +..||..|++|+|+||+||+++       .+|      .++|+|||++..+...........     .........+
T Consensus       123 ~~-L~~LH~~~ivH~Dlkp~Nil~~-------~~~------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  188 (353)
T 2b9h_A          123 RA-VKVLHGSNVIHRDLKPSNLLIN-------SNC------DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY  188 (353)
T ss_dssp             HH-HHHHHHTTEECSCCCGGGEEEC-------TTC------CEEECCCTTCEECC----------------CCCCCCGGG
T ss_pred             HH-HHHHHHCCeecCCCCHHHeEEc-------CCC------cEEEEecccccccccccccccCccccccchhhccccccc
Confidence            44 8889999999999999999998       667      899999999988765432221100     0000112346


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACS  562 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~  562 (581)
                      .++|.+..-.......|.++|+..+.+++.+.  +......+.+..+.
T Consensus       189 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  236 (353)
T 2b9h_A          189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF  236 (353)
T ss_dssp             CCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             cCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            77777655444555679999999999998773  44444444444443

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.64  E-value=7.8e-16  Score=156.51  Aligned_cols=212  Identities=18%  Similarity=0.080  Sum_probs=130.9

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|+ .+.||+|++|.||+|+.+.+       |+.||||+.+..-....                     .....      
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~---------------------~~~~~------   55 (308)
T 3g33_A           10 RYEPVAEIGVGAYGTVYKARDPHS-------GHFVALKSVRVPNGGGG---------------------GGGLP------   55 (308)
T ss_dssp             CCEEEEEECCSSSCCEEEEECTTT-------CCEEEEEEEEEECCCTT---------------------SSCCC------
T ss_pred             ceEEEEEEecCCCeEEEEEEECCC-------CcEEEEEEEeccccccc---------------------ccccc------
Confidence            344 57899999999999998765       79999999763211000                     00000      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC---CC----CcEEEEeccCCccHHHHHHhhhc---chhhHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL---VH----PAVLVETYEQGECVSRYVDELQG---HERLKS  434 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l---~t----~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~  434 (581)
                             .++.+|.+.+.++...  .+++  +++.+.-+   ..    .-++||||++| +|.+++.....   ......
T Consensus        56 -------~~~~~e~~~l~~l~~~--~h~n--iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~  123 (308)
T 3g33_A           56 -------ISTVREVALLRRLEAF--EHPN--VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK  123 (308)
T ss_dssp             -------HHHHHHHHHHHHHHHH--CCTT--BCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHH
T ss_pred             -------hhHHHHHHHHHHHhhc--CCCC--eEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHH
Confidence                   1112233333333211  1222  22222111   11    24799999987 88888765322   122223


Q ss_pred             HHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          435 ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      .++..++.+ +..||..|++|+|+||+||+++       .++      .++|+|||++..++......      ......
T Consensus       124 ~i~~qi~~a-l~~lH~~~ivH~Dlkp~Nil~~-------~~~------~~kl~Dfg~a~~~~~~~~~~------~~~gt~  183 (308)
T 3g33_A          124 DLMRQFLRG-LDFLHANCIVHRDLKPENILVT-------SGG------TVKLADFGLARIYSYQMALT------PVVVTL  183 (308)
T ss_dssp             HHHHHHHHH-HHHHHHTTCCCSCCCTTTEEEC-------TTS------CEEECSCSCTTTSTTCCCSG------GGGCCC
T ss_pred             HHHHHHHHH-HHHHHHCCcccCCCCHHHEEEc-------CCC------CEEEeeCccccccCCCcccC------Cccccc
Confidence            344444444 8889999999999999999998       667      89999999998765432211      111233


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      .+.++|.+.. .......|.|+++..+.+++.+.  +......+.+..+.+.
T Consensus       184 ~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~  234 (308)
T 3g33_A          184 WYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL  234 (308)
T ss_dssp             SSCCHHHHHT-SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccCchHHcC-CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            4667777654 44556789999999999999773  4555555666555544

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.64  E-value=3.8e-16  Score=163.66  Aligned_cols=190  Identities=15%  Similarity=0.117  Sum_probs=123.1

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      .+|+ .+.||+|++|.||+|+.+.+       |+.||||+.++.....                      .-        
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~----------------------~~--------   83 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKES-------GNHYAMKILDKQKVVK----------------------LK--------   83 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTT-------CCEEEEEEEEHHHHHH----------------------TT--------
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCC-------CCEEEEEEEEhHHhcc----------------------HH--------
Confidence            4455 58999999999999999865       7999999975421000                      00        


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                            ..-.+.+|.+.+.++     .+++  +++.+..+  ....++||||++|++|.+++..... .......++..+
T Consensus        84 ------~~~~~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi  150 (350)
T 1rdq_E           84 ------QIEHTLNEKRILQAV-----NFPF--LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI  150 (350)
T ss_dssp             ------CHHHHHHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHhC-----CCCC--CCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHH
Confidence                  001123344433222     2222  22333222  3345899999999999999865322 122223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||+|||++       .+|      .++|+|||++..+......        ....-.+.++|
T Consensus       151 ~~a-L~~LH~~~ivHrDlkp~NIll~-------~~g------~~kL~DFg~a~~~~~~~~~--------~~gt~~y~aPE  208 (350)
T 1rdq_E          151 VLT-FEYLHSLDLIYRDLKPENLLID-------QQG------YIQVTDFGFAKRVKGRTWT--------LCGTPEALAPE  208 (350)
T ss_dssp             HHH-HHHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECSSCBCC--------CEECGGGCCHH
T ss_pred             HHH-HHHHHHCCcccccCccceEEEC-------CCC------CEEEcccccceeccCCccc--------ccCCccccCHH
Confidence            444 8889999999999999999998       677      8999999999876543210        01122456666


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.. ..+....|.|+++..+.+++.+
T Consensus       209 ~~~~-~~~~~~~DiwslG~il~ell~g  234 (350)
T 1rdq_E          209 IILS-KGYNKAVDWWALGVLIYEMAAG  234 (350)
T ss_dssp             HHTT-CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             HhcC-CCCCCcCCEecccHhHhHHhhC
Confidence            6654 3344567999999999998877

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.64  E-value=8.7e-16  Score=158.63  Aligned_cols=196  Identities=17%  Similarity=0.111  Sum_probs=116.9

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|+ .+.||+|++|.||+|+....    ...|+.||||+.+......-.                               
T Consensus        18 ~y~~~~~lG~G~~g~V~~~~~~~~----~~~~~~~aiK~~~~~~~~~~~-------------------------------   62 (327)
T 3a62_A           18 CFELLRVLGKGGYGKVFQVRKVTG----ANTGKIFAMKVLKKAMIVRNA-------------------------------   62 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECSS----TTTTCEEEEEEECCC-------------------------------------
T ss_pred             HeEEEEEEEeCCCEEEEEEEEecc----CCCCcEEEEEEEEHHHhhhhh-------------------------------
Confidence            344 57899999999999998521    012799999998765210000                               


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                          .....+.+|...+.++.     +++  +++.+.  ......++||||++|.+|.+++..... .......++..++
T Consensus        63 ----~~~~~~~~E~~~l~~l~-----hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~  131 (327)
T 3a62_A           63 ----KDTAHTKAERNILEEVK-----HPF--IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS  131 (327)
T ss_dssp             ------------HHHHHHHCC-----CTT--BCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             ----hHHHHHHHHHHHHHhCC-----CCC--ccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHH
Confidence                00011233444444331     232  233332  223456899999999999998864321 1112223343444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+|+||+|||++       .+|      .++|+|||++..........     ......-.+.++|.
T Consensus       132 ~a-l~~lH~~~ivH~Dlkp~Nill~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~  192 (327)
T 3a62_A          132 MA-LGHLHQKGIIYRDLKPENIMLN-------HQG------HVKLTDFGLCKESIHDGTVT-----HTFCGTIEYMAPEI  192 (327)
T ss_dssp             HH-HHHHHHTTCCCCCCCTTTEEEC-------TTS------CEEECCCSCC---------------CTTSSCCTTSCHHH
T ss_pred             HH-HHHHHhCCEEcccCCHHHeEEC-------CCC------cEEEEeCCcccccccCCccc-----cccCCCcCccCHhh
Confidence            33 8889999999999999999998       677      89999999987643322110     01111234566666


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. .......|.|+|+..+.+++.+
T Consensus       193 ~~~-~~~~~~~DiwslG~il~el~~g  217 (327)
T 3a62_A          193 LMR-SGHNRAVDWWSLGALMYDMLTG  217 (327)
T ss_dssp             HTT-SCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CcC-CCCCCcccchhHHHHHHHHHHC
Confidence            643 3344567999999999999877

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.64  E-value=1.1e-15  Score=155.51  Aligned_cols=196  Identities=17%  Similarity=0.134  Sum_probs=118.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ++.||+|++|.||+|+...+       |+.||||+.+..-...                                     
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~-------------------------------------   53 (316)
T 2ac3_A           18 EDVLGEGAHARVQTCINLIT-------SQEYAVKIIEKQPGHI-------------------------------------   53 (316)
T ss_dssp             CCCCCCCSSEEEEEEECSSS-------CCEEEEEEEECCSSCC-------------------------------------
T ss_pred             CceecCCceEEEEEEEEcCC-------CcEEEEEEEeeCcchh-------------------------------------
Confidence            57899999999999998764       7999999976541110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        +-.+.+|.+.+.++    ..++++  ++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        54 --~~~~~~E~~~l~~~----~~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~-l  124 (316)
T 2ac3_A           54 --RSRVFREVEMLYQC----QGHRNV--LELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA-L  124 (316)
T ss_dssp             --HHHHHHHHHHHHHT----CCCTTB--CCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHHh----cCCCCe--eeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHH-H
Confidence              01123344433322    123332  23322  223455899999999999999865322 122223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHH--HHHHHHHhhcHHHHHHHHH
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV--EFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~--~l~~Al~~~D~~~~~e~ll  523 (581)
                      ..||..|++|+|+||.||+++       .++   ....++|+|||++..+.........  .........-.+.++|.+.
T Consensus       125 ~~lH~~~ivH~dlkp~Nil~~-------~~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  194 (316)
T 2ac3_A          125 DFLHNKGIAHRDLKPENILCE-------HPN---QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE  194 (316)
T ss_dssp             HHHHHTTCCCCCCCGGGEEES-------CSS---SSCSEEECCTTCCC-------------------CCSGGGCCHHHHH
T ss_pred             HHHHhCCceeCCCCHHHEEEc-------cCC---CcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhh
Confidence            889999999999999999998       333   0125999999998876432211100  0011111233456677765


Q ss_pred             hh----cCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RL----SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l----~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..    .......|.|+++..+.+++.+
T Consensus       195 ~~~~~~~~~~~~~DiwslG~il~~l~~g  222 (316)
T 2ac3_A          195 AFSEEASIYDKRCDLWSLGVILYILLSG  222 (316)
T ss_dssp             HTSHHHHHHTTTHHHHHHHHHHHHHHHS
T ss_pred             cccccccCCCcccccHhHHHHHHHHHHC
Confidence            42    3344567999999999999876

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.63  E-value=4.8e-16  Score=167.72  Aligned_cols=192  Identities=19%  Similarity=0.104  Sum_probs=114.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||.|++|.||+|+.+.+       |+.||||+..........                                   
T Consensus        58 ~~~lG~G~~g~V~~~~~~~~-------~~~vaiK~i~~~~~~~~~-----------------------------------   95 (458)
T 3rp9_A           58 RHLIGTGSYGHVCEAYDKLE-------KRVVAIKKILRVFEDLID-----------------------------------   95 (458)
T ss_dssp             CCC-------CEEEEEECC---------CEEEEEEECSTTSSHHH-----------------------------------
T ss_pred             eeEeeecCCeEEEEEEECCC-------CcEEEEEEechhhcCHHH-----------------------------------
Confidence            57899999999999999865       799999987543221100                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-------CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-------LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-------l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                        .-.+.+|.+.+.++.     ++++  .+.+.-       ....-++||||++| +|.+++..... .......++..+
T Consensus        96 --~~~~~~E~~~l~~l~-----h~ni--v~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~~~~qi  165 (458)
T 3rp9_A           96 --CKRILREIAILNRLN-----HDHV--VKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTELHIKTLLYNL  165 (458)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTB--CCEEEECCCSCTTTCCCEEEEECCCSE-EHHHHHHSSCCCCHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhCC-----CCCC--CceEEEEecCCcccCceEEEEEecccc-chhhhcccCCCCCHHHHHHHHHHH
Confidence              012334555554431     2222  122211       11345899999865 78777754221 112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhh---------------------
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD---------------------  499 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~---------------------  499 (581)
                      +.+ ++.||..|++||||||+|||++       .+|      .++|+|||++..+....                     
T Consensus       166 ~~a-L~~LH~~~iiHrDlKp~NILl~-------~~~------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (458)
T 3rp9_A          166 LVG-VKYVHSAGILHRDLKPANCLVN-------QDC------SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP  231 (458)
T ss_dssp             HHH-HHHHHHTTCBCCCCCGGGEEEC-------TTC------CEEECCCTTCBCTTSCTTCCCCCC--------------
T ss_pred             HHH-HHHHHhCCcCCCCCChhhEEEC-------CCC------CEeecccccchhccCccccccccccCcccccccccccc
Confidence            444 8889999999999999999998       677      89999999998764221                     


Q ss_pred             -HHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          500 -RVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       500 -r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       ...........+-.-++.+.|.++.-..+....|.|+|++.+.++++
T Consensus       232 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt  279 (458)
T 3rp9_A          232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN  279 (458)
T ss_dssp             -------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence             01111223333445568889988765666677899999999999996

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.63  E-value=1.5e-14  Score=144.76  Aligned_cols=140  Identities=18%  Similarity=0.260  Sum_probs=93.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....        ++.||||+.+++...                                      
T Consensus        29 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~--------------------------------------   62 (283)
T 3gen_A           29 LKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMS--------------------------------------   62 (283)
T ss_dssp             EEECC---CEEEEEEEETT--------TEEEEEEEECTTSBC--------------------------------------
T ss_pred             HhhcCCCCCceEEEEEEcC--------CCeEEEEEecCCCCC--------------------------------------
Confidence            5789999999999998864        589999998765211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        +-++.+|++.+.++.     +++  +++.+.  ......++||||++|.+|.+++.....  .......++..++.+ 
T Consensus        63 --~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~-  132 (283)
T 3gen_A           63 --EDEFIEEAKVMMNLS-----HEK--LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA-  132 (283)
T ss_dssp             --HHHHHHHHHHHHTCC-----CTT--BCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHhcCC-----CCC--EeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHH-
Confidence              012334555444331     222  333332  223445899999999999999865222  112223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      +..||..|++|+|+||+||+++       .++      .++|+|||++..+..
T Consensus       133 l~~lH~~~i~H~dikp~Nili~-------~~~------~~kl~Dfg~~~~~~~  172 (283)
T 3gen_A          133 MEYLESKQFLHRDLAARNCLVN-------DQG------VVKVSDFGLSRYVLD  172 (283)
T ss_dssp             HHHHHHTTCCCSSCSGGGEEEC-------TTS------CEEECSTTGGGGBCC
T ss_pred             HHHHHHCCccCCCCccceEEEc-------CCC------CEEEccccccccccc
Confidence            8889999999999999999998       667      899999999876543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.63  E-value=4.8e-17  Score=167.94  Aligned_cols=194  Identities=15%  Similarity=0.123  Sum_probs=118.9

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      +.|+ .+.||+|++|.||+|+.+.+       |+.||||+....-...                                
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~--------------------------------   47 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVT-------EEAVAVKIVDMKRAVD--------------------------------   47 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEECC------------------------------------
T ss_pred             hhceeeeEEecCCCEEEEEEEECCC-------CcEEEEEEEEcccccc--------------------------------
Confidence            4454 68899999999999999865       7999999976431100                                


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                            .+-.+.+|...+.++     .+++  +++.+.  ......++||||++|.+|.+++..... .......++..+
T Consensus        48 ------~~~~~~~E~~~l~~l-----~hpn--Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi  114 (323)
T 3tki_A           48 ------CPENIKKEICINKML-----NHEN--VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL  114 (323)
T ss_dssp             ---------CHHHHHHHHHHC-----CCTT--BCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHH
T ss_pred             ------hHHHHHHHHHHHHhC-----CCCC--CCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHH
Confidence                  001123444444332     1232  223332  223445799999999999988754221 122223445454


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||+||+++       .++      .++|+|||++..+.........   ........+.+.|
T Consensus       115 ~~a-L~~LH~~givH~Dlkp~NIll~-------~~~------~~kl~Dfg~a~~~~~~~~~~~~---~~~~gt~~y~aPE  177 (323)
T 3tki_A          115 MAG-VVYLHGIGITHRDIKPENLLLD-------ERD------NLKISDFGLATVFRYNNRERLL---NKMCGTLPYVAPE  177 (323)
T ss_dssp             HHH-HHHHHHTTEECSCCSGGGEEEC-------TTC------CEEECCCTTCEECEETTEECCB---CSCCSCGGGSCHH
T ss_pred             HHH-HHHHHHCCccccccchHHEEEe-------CCC------CEEEEEeeccceeccCCccccc---CCCccCcCccCcH
Confidence            444 8889999999999999999998       666      8999999999765322110000   0001122345566


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+..........|.++++..+.+++.+
T Consensus       178 ~~~~~~~~~~~~DiwslG~il~~ll~g  204 (323)
T 3tki_A          178 LLKRREFHAEPVDVWSCGIVLTAMLAG  204 (323)
T ss_dssp             HHHCSSBCHHHHHHHHHHHHHHHHHHS
T ss_pred             HhccCCCCCCcccHHHHHHHHHHHHhC
Confidence            654433223346788888888887765

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.63  E-value=1.8e-15  Score=151.45  Aligned_cols=191  Identities=18%  Similarity=0.172  Sum_probs=121.2

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ++|+ .+.||+|++|.||+|+...+       ++.||||+..+.....                                
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~--------------------------------   49 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQS-------KFILALKVLFKAQLEK--------------------------------   49 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTT-------CCEEEEEEEEHHHHHH--------------------------------
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccC-------CcEEEEEEEeccccch--------------------------------
Confidence            3444 68999999999999999864       6899999875421000                                


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                          -..+-.+.+|+..+.++    . +++  +++.+.  ......++||||++|.+|.+++..... .......++..+
T Consensus        50 ----~~~~~~~~~e~~~l~~l----~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi  118 (279)
T 3fdn_A           50 ----AGVEHQLRREVEIQSHL----R-HPN--ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL  118 (279)
T ss_dssp             ----HTCHHHHHHHHHHHTTC----C-CTT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             ----hhHHHHHHHHHHHHHcC----C-CCC--CcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHH
Confidence                00011233444444322    1 232  333332  223456899999999999998865322 112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||+||+++       .+|      .++|+|||++...+.......       .....+.++|
T Consensus       119 ~~~-l~~LH~~~i~H~dlkp~Nili~-------~~~------~~~l~Dfg~~~~~~~~~~~~~-------~~~~~y~aPE  177 (279)
T 3fdn_A          119 ANA-LSYCHSKRVIHRDIKPENLLLG-------SAG------ELKIADFGWSVHAPSSRRTDL-------CGTLDYLPPE  177 (279)
T ss_dssp             HHH-HHHHHTTTCEECCCCGGGEEEC-------TTS------CEEECSCCEESCC---------------CCCCTTCCHH
T ss_pred             HHH-HHHHHhCCEecccCChHhEEEc-------CCC------CEEEEeccccccCCccccccc-------CCCCCccCHh
Confidence            444 7889999999999999999998       677      899999999876655433221       1233455666


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.. .......|.++++..+.+++.+
T Consensus       178 ~~~~-~~~~~~~Di~slG~il~~l~~g  203 (279)
T 3fdn_A          178 MIEG-RMHDEKVDLWSLGVLCYEFLVG  203 (279)
T ss_dssp             HHTT-CCCCTTHHHHHHHHHHHHHHHS
T ss_pred             Hhcc-CCCCccchhHhHHHHHHHHHHC
Confidence            5533 3344567999999999998876

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.63  E-value=1.1e-15  Score=164.33  Aligned_cols=207  Identities=17%  Similarity=0.086  Sum_probs=132.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+.+.+-.                                  +..  
T Consensus       102 ~~~LG~G~fg~V~~a~~~~~-------~~~vAvK~~~~~~~----------------------------------~~~--  138 (429)
T 3kvw_A          102 LKVIGKGSFGQVVKAYDHKV-------HQHVALKMVRNEKR----------------------------------FHR--  138 (429)
T ss_dssp             EEEEEESSSEEEEEEEETTT-------TEEEEEEEECSCHH----------------------------------HHH--
T ss_pred             EEEcccCccEEEEEEEECCC-------CcEEEEEEECCccc----------------------------------hHH--
Confidence            57899999999999999875       79999999765410                                  000  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                          ++.+|.+.+..+... .......+.+.+..+  ....++||||++| +|.+++.....   .......++..++.+
T Consensus       139 ----~~~~E~~~l~~l~~~-~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~a  212 (429)
T 3kvw_A          139 ----QAAEEIRILEHLRKQ-DKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQC  212 (429)
T ss_dssp             ----HHHHHHHHHHHHHTT-CTTSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHhhc-cccCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence                122344444443322 111222333333222  3445899999976 78887765321   112223445444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..||..|++|+|+||.|||++       .++    ...++|+|||++.........        ......+.++|.+.
T Consensus       213 -L~~LH~~~ivHrDlKp~NILl~-------~~~----~~~vkL~DFG~a~~~~~~~~~--------~~gt~~y~aPE~~~  272 (429)
T 3kvw_A          213 -LDALHKNRIIHCDLKPENILLK-------QQG----RSGIKVIDFGSSCYEHQRVYT--------YIQSRFYRAPEVIL  272 (429)
T ss_dssp             -HHHHHHHTEECSCCSGGGEEES-------STT----SCCEEECCCTTCEETTCCCCS--------SCSCGGGCCHHHHH
T ss_pred             -HHHHHHCCeecCCCCHHHeEEc-------cCC----CcceEEeecccceecCCcccc--------cCCCCCccChHHHh
Confidence             8889999999999999999998       444    124999999998765432211        11233467788776


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHHH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNYL  565 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~l  565 (581)
                      . ..+....|.|+|+..+.+++.+.  +......+.+..+...+
T Consensus       273 ~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~  315 (429)
T 3kvw_A          273 G-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELL  315 (429)
T ss_dssp             T-BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             C-CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence            5 33456789999999999999883  55556666666666553

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.63  E-value=3.5e-16  Score=161.22  Aligned_cols=210  Identities=17%  Similarity=0.149  Sum_probs=126.9

Q ss_pred             CCChhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccccccc
Q 008021          277 GRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWL  355 (581)
Q Consensus       277 G~~~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l  355 (581)
                      |..+.++-..|. .+.||+|++|.||+|+...+       ++.||||+.++......                       
T Consensus        18 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~-----------------------   67 (345)
T 3hko_A           18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQT-------RAIRAIKIMNKNKIRQI-----------------------   67 (345)
T ss_dssp             CBCHHHHHHHEEEEEEEEECSSCEEEEEEETTT-------CCEEEEEEEEHHHHHC------------------------
T ss_pred             CchhhhhhhheeecceeeecCCeEEEEEEECCC-------CceEEEeehhhhhhccc-----------------------
Confidence            445555556666 68999999999999999765       79999999764310000                       


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-----
Q 008021          356 RLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-----  428 (581)
Q Consensus       356 ~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-----  428 (581)
                      . .+          ..-.+.+|++.+.++.     +++  +++.+..  .....+|||||++|++|.+++.....     
T Consensus        68 ~-~~----------~~~~~~~E~~~l~~l~-----hpn--iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~  129 (345)
T 3hko_A           68 N-PK----------DVERIKTEVRLMKKLH-----HPN--IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGK  129 (345)
T ss_dssp             ---C----------HHHHHHHHHHHHHHCC-----CTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTE
T ss_pred             C-HH----------HHHHHHHHHHHHHhCC-----CCC--cceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccc
Confidence            0 00          0112445665555442     233  2333322  23345899999999999988731000     


Q ss_pred             --------------------------------c----hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeeccccc
Q 008021          429 --------------------------------H----ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKS  472 (581)
Q Consensus       429 --------------------------------~----~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~  472 (581)
                                                      .    ......++..++.+ +..||..|++|+|+||.||+++      
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~-l~~LH~~~ivH~Dlkp~NIll~------  202 (345)
T 3hko_A          130 CAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA-LHYLHNQGICHRDIKPENFLFS------  202 (345)
T ss_dssp             EEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEES------
T ss_pred             cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH-HHHHHHCCccccCCChhhEEEe------
Confidence                                            0    01112234444433 7889999999999999999997      


Q ss_pred             ccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          473 SQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       473 ~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .++    ...++|+|||++..+........... ......-.+.++|.+... .......|.++|+..+.+++.+
T Consensus       203 -~~~----~~~~kl~Dfg~a~~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g  272 (345)
T 3hko_A          203 -TNK----SFEIKLVDFGLSKEFYKLNNGEYYGM-TTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG  272 (345)
T ss_dssp             -CSS----SCCEEECCCTTCEEGGGTTCC---------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHS
T ss_pred             -cCC----CceEEEeeccccccccccCccccccc-cccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHC
Confidence             222    22799999999987644221111000 011123345677776432 3344567999999999998876

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.63  E-value=1.3e-16  Score=171.34  Aligned_cols=194  Identities=14%  Similarity=0.104  Sum_probs=123.3

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|+||+|+.+.+       |+.||||+.+...       +  ...                       
T Consensus        62 ~f~~~~~lG~G~fG~V~~~~~~~~-------~~~vAiK~l~k~~-------~--~~~-----------------------  102 (412)
T 2vd5_A           62 DFEILKVIGRGAFSEVAVVKMKQT-------GQVYAMKIMNKWD-------M--LKR-----------------------  102 (412)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTT-------CCEEEEEEEEHHH-------H--HHH-----------------------
T ss_pred             hEEEEEEEeeCCCeEEEEEEECCC-------CCEEEEEEEeHHH-------h--hhH-----------------------
Confidence            344 57899999999999999875       7999999975320       0  000                       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIG  440 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~  440 (581)
                          ...-.+.+|...+.+.     .++.  +++.+..+  ....+|||||++|++|.+++.....  .......++..+
T Consensus       103 ----~~~~~~~~E~~il~~~-----~hp~--Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi  171 (412)
T 2vd5_A          103 ----GEVSCFREERDVLVNG-----DRRW--ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEI  171 (412)
T ss_dssp             ----GGGCCHHHHHHHHHHS-----CTTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHHhc-----CCCC--eeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHH
Confidence                0001123344333322     1222  23333222  2345799999999999999865321  112222334444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++||||||+|||++       .+|      +++|+|||++..+........    ....-.-.+.+.|
T Consensus       172 ~~a-L~~LH~~giiHrDLKp~NILld-------~~g------~vkL~DFGla~~~~~~~~~~~----~~~~Gt~~Y~APE  233 (412)
T 2vd5_A          172 VMA-IDSVHRLGYVHRDIKPDNILLD-------RCG------HIRLADFGSCLKLRADGTVRS----LVAVGTPDYLSPE  233 (412)
T ss_dssp             HHH-HHHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECCTTSCEEC----SSCCSCGGGCCHH
T ss_pred             HHH-HHHHHHCCeeecccCHHHeeec-------CCC------CEEEeechhheeccCCCcccc----ceeccccCcCCHH
Confidence            433 8889999999999999999998       677      899999999987754321000    0001123466777


Q ss_pred             HHHhh------cCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRL------SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l------~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+...      ..+....|.|+|+..+.+++.+
T Consensus       234 ~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG  266 (412)
T 2vd5_A          234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG  266 (412)
T ss_dssp             HHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHS
T ss_pred             HHhhcccCcCCCCCChHHhhhHHhHHHHHHHhC
Confidence            77653      2344567999999999999877

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.63  E-value=4.2e-16  Score=166.15  Aligned_cols=192  Identities=17%  Similarity=0.126  Sum_probs=117.3

Q ss_pred             hhhhccCC--ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          281 SEIFDGFE--EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       281 ~eiF~~fd--~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      .+++.++.  .+.||.|++|.||+|+.+.+       |+.||||+.+..  ..                           
T Consensus        57 ~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~-------~~~vAiK~~~~~--~~---------------------------  100 (400)
T 1nxk_A           57 NAIIDDYKVTSQVLGLGINGKVLQIFNKRT-------QEKFALKMLQDC--PK---------------------------  100 (400)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEECS--HH---------------------------
T ss_pred             CcccccceeccceeeeccCeEEEEEEECCC-------CCEEEEEEeCcc--hh---------------------------
Confidence            34555555  36899999999999999875       799999997532  00                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC------CCCcEEEEeccCCccHHHHHHhhhc---c
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL------VHPAVLVETYEQGECVSRYVDELQG---H  429 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l------~t~~VLVmEyi~G~~L~~~l~~~~~---~  429 (581)
                                     +.+|...+.+.    ..++++  ++.+.-+      ...-+|||||++|++|.+++.....   .
T Consensus       101 ---------------~~~E~~~~~~~----~~hp~i--v~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~  159 (400)
T 1nxk_A          101 ---------------ARREVELHWRA----SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT  159 (400)
T ss_dssp             ---------------HHHHHHHHHHH----TTSTTB--CCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCB
T ss_pred             ---------------HHHHHHHHHHh----cCCCCc--ceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCC
Confidence                           11222222111    122222  2222111      1224799999999999999865221   1


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA  509 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~A  509 (581)
                      ......++..++.+ +..||..|++|+||||+|||++...    .++      .++|+|||++..........      .
T Consensus       160 ~~~~~~i~~qi~~a-L~~LH~~~ivHrDlkp~Nill~~~~----~~~------~~kl~DFG~a~~~~~~~~~~------~  222 (400)
T 1nxk_A          160 EREASEIMKSIGEA-IQYLHSINIAHRDVKPENLLYTSKR----PNA------ILKLTDFGFAKETTSHNSLT------T  222 (400)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHTTEECCCCCGGGEEESSSS----TTC------CEEECCCTTCEECC-------------
T ss_pred             HHHHHHHHHHHHHH-HHHHHHCCccccCcCcceEEEecCC----CCc------cEEEEecccccccCCCCccc------c
Confidence            22223344444444 8889999999999999999998110    145      89999999998776543211      1


Q ss_pred             HHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       510 l~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......+.+.|.+. -..+....|.|+|+..+.+++.+
T Consensus       223 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g  259 (400)
T 1nxk_A          223 PCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCG  259 (400)
T ss_dssp             ----CTTCCGGGSC-CCCSSSHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCccCHhhcC-CCCCCCcccHHHHHHHHHHHHhC
Confidence            11223455555542 23344567999999999999876

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.63  E-value=4.9e-16  Score=163.98  Aligned_cols=224  Identities=17%  Similarity=0.211  Sum_probs=113.3

Q ss_pred             HhhhcCCCCCCHHHHHHHHHHHhCCChhhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhH
Q 008021          254 SELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI  332 (581)
Q Consensus       254 ~~Lqd~~pp~~~~~~~~~le~elG~~~~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i  332 (581)
                      ..++..+.|++++...+.+. ++...++  ...|+ .+.||+|++|.||+|+++.+  +  ..++.||||+.+.+..+. 
T Consensus        17 ~~~~~~~~p~~~~~~~~~~~-~~~~~~~--~~~~~~~~~lG~G~fg~Vy~~~~~~~--~--~~~~~vaiK~~~~~~~~~-   88 (373)
T 2qol_A           17 PGLRTFVDPHTFEDPTQTVH-EFAKELD--ATNISIDKVVGAGEFGEVCSGRLKLP--S--KKEISVAIKTLKVGYTEK-   88 (373)
T ss_dssp             ----CCC-----------CT-TTSCBCC--GGGCCCCEEEEECSSSEEEEC-CBCT--T--SCBCCEEEEECCTTCCHH-
T ss_pred             cccccccCccccCCHHHHHH-HHHhhcC--HhhceeeeEEeeCCCeEEEEEEEecC--C--CCceeEEEEEecCccCHH-
Confidence            34555566666654433322 2222221  12344 68999999999999998632  1  126889999987653211 


Q ss_pred             HHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEE
Q 008021          333 RRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLV  410 (581)
Q Consensus       333 ~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLV  410 (581)
                                                           ..-+|.+|+..+.++     .+++  +++.+.  ......++|
T Consensus        89 -------------------------------------~~~~~~~E~~~l~~l-----~h~n--iv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           89 -------------------------------------QRRDFLGEASIMGQF-----DHPN--IIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             -------------------------------------HHHHHHHHHHHHTTC-----CCTT--BCCEEEEECSSSSCEEE
T ss_pred             -------------------------------------HHHHHHHHHHHHHhC-----CCCC--CCeEEEEEeeCCceEEE
Confidence                                                 012345566555433     1233  233332  223456899


Q ss_pred             EeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEe
Q 008021          411 ETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD  488 (581)
Q Consensus       411 mEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiD  488 (581)
                      |||++|.+|.+++......  ......++..++.+ +..||..|++|+|+||.|||++       .++      .++|+|
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kl~D  190 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG-MKYLSDMGYVHRDLAARNILIN-------SNL------VCKVSD  190 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEC-------TTC------CEEECC
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHH-HHHHHHCCeeCCCCCcceEEEc-------CCC------CEEECc
Confidence            9999999999998653211  11223344444443 8889999999999999999998       667      899999


Q ss_pred             cccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          489 VGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       489 FGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ||++..+...........  .....-.+.++|.+.. .......|.++|+..+.+++.
T Consensus       191 fg~a~~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~-~~~~~~~Dv~SlG~il~ellt  245 (373)
T 2qol_A          191 FGLGRVLEDDPEAAYTTR--GGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMS  245 (373)
T ss_dssp             C------------------------CTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             CccccccccCCccceecc--CCCcCCCccChhhhcc-CCcCchhcHHHHHHHHHHHHh
Confidence            999987765432211100  0000012344454432 233334566677666666554

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.63  E-value=5.6e-16  Score=161.79  Aligned_cols=186  Identities=18%  Similarity=0.113  Sum_probs=113.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||||+.+.....                                      
T Consensus        58 ~~~lG~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~--------------------------------------   92 (349)
T 2w4o_A           58 ESELGRGATSIVYRCKQKGT-------QKPYALKVLKKTVDK--------------------------------------   92 (349)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEEC------------------------------------------
T ss_pred             eeEEeeCCCEEEEEEEECCC-------CcEEEEEEeccchhH--------------------------------------
Confidence            57899999999999999864       689999997654110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|...+.++.     ++++  ++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        93 ---~~~~~E~~~l~~l~-----h~ni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~-L  161 (349)
T 2w4o_A           93 ---KIVRTEIGVLLRLS-----HPNI--IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEA-V  161 (349)
T ss_dssp             ---------CHHHHHCC-----CTTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhCC-----CCCC--cceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               01233444444331     2332  22222  223456899999999999998754221 122223444444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+||+++..+    .++      .++|+|||++.........      ......-.+.++|.+.. 
T Consensus       162 ~~LH~~~ivH~Dikp~NIll~~~~----~~~------~~kl~Dfg~a~~~~~~~~~------~~~~gt~~y~aPE~~~~-  224 (349)
T 2w4o_A          162 AYLHENGIVHRDLKPENLLYATPA----PDA------PLKIADFGLSKIVEHQVLM------KTVCGTPGYCAPEILRG-  224 (349)
T ss_dssp             HHHHHTTCCCCCCCGGGEEESSSS----TTC------CEEECCCC----------------------CGGGSCHHHHTT-
T ss_pred             HHHHHCCeEecCCCcccEEEecCC----CCC------CEEEccCccccccCccccc------ccccCCCCccCHHHhcC-
Confidence            889999999999999999997211    245      8999999998876543211      11223345667776643 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       225 ~~~~~~~DiwslG~il~ell~g  246 (349)
T 2w4o_A          225 CAYGPEVDMWSVGIITYILLCG  246 (349)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCcccchHHHHHHHHHHHhC
Confidence            3345567999999999999877

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.63  E-value=9.8e-16  Score=166.68  Aligned_cols=203  Identities=16%  Similarity=0.089  Sum_probs=126.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+........                               ...   
T Consensus        67 ~~~lG~G~~g~V~~a~~~~~-------~~~vAiK~~~~~~~~~-------------------------------~~~---  105 (464)
T 3ttj_A           67 LKPIGSGAQGIVCAAYDAVL-------DRNVAIKKLSRPFQNQ-------------------------------THA---  105 (464)
T ss_dssp             EEEEEECSSCEEEEEEETTT-------TEEEEEEEEESGGGSH-------------------------------HHH---
T ss_pred             EEEeecCCCeEEEEEEECCC-------CCEEEEEEECccccCh-------------------------------HHH---
Confidence            57899999999999999875       7999999876431110                               000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--------CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--------VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--------~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~  440 (581)
                         -.+.+|.+.+.++     +++++  .+.+.-+        ....+|||||++|. +.+.+.. .........++..+
T Consensus       106 ---~~~~~E~~~l~~l-----~hpnI--v~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~~~-~l~~~~~~~~~~qi  173 (464)
T 3ttj_A          106 ---KRAYRELVLMKCV-----NHKNI--ISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQM-ELDHERMSYLLYQM  173 (464)
T ss_dssp             ---HHHHHHHHHHHHC-----CCTTB--CCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHHTS-CCCHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhC-----CCCCC--CcEEEEEccCCccccCCeEEEEEeCCCCC-HHHHHhh-cCCHHHHHHHHHHH
Confidence               1122344444332     12222  1222111        12348999999986 4443322 11112223344455


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ ++.||..|++|||+||+|||++       .+|      .++|+|||++.........      .......++.+.|
T Consensus       174 l~a-L~~lH~~~iiHrDlkp~NIll~-------~~~------~~kl~DFG~a~~~~~~~~~------~~~~gt~~y~aPE  233 (464)
T 3ttj_A          174 LCG-IKHLHSAGIIHRDLKPSNIVVK-------SDC------TLKILDFGLARTAGTSFMM------TPYVVTRYYRAPE  233 (464)
T ss_dssp             HHH-HHHHHHTTCCCCCCCGGGEEEC-------TTS------CEEECCCCCC-----CCCC----------CCCTTCCHH
T ss_pred             HHH-HHHHHHCCcccCCCChHhEEEe-------CCC------CEEEEEEEeeeecCCCccc------CCCcccccccCHH
Confidence            444 8889999999999999999999       677      8999999999876543211      1123345678888


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHHH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNYL  565 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~l  565 (581)
                      .+... .+....|.|+++..+.+++.+.  +...+..+++..+.+.+
T Consensus       234 ~~~~~-~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~l  279 (464)
T 3ttj_A          234 VILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL  279 (464)
T ss_dssp             HHTTC-CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             HHcCC-CCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            88764 4556789999999999999873  55555556666555543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.63  E-value=5.2e-16  Score=162.52  Aligned_cols=194  Identities=18%  Similarity=0.119  Sum_probs=122.2

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|.||+|+.+.+       |+.||||+.+.....  .                        .+..   
T Consensus        18 ~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vaiK~~~~~~~~--~------------------------~~~~---   61 (345)
T 1xjd_A           18 DFILHKMLGKGSFGKVFLAEFKKT-------NQFFAIKALKKDVVL--M------------------------DDDV---   61 (345)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTT-------TEEEEEEEEEHHHHH--H------------------------TTCH---
T ss_pred             HeEEEEEEeeCCCeEEEEEEECCC-------CCEEEEEEEEhHHhh--h------------------------hhhH---
Confidence            344 58899999999999999875       799999997643100  0                        0000   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                             -.+..|...+.+.    ..++++  ++.+..+  ...-++||||++|++|.+++..... .......++..++
T Consensus        62 -------~~~~~E~~il~~~----~~hp~i--v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~  128 (345)
T 1xjd_A           62 -------ECTMVEKRVLSLA----WEHPFL--THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII  128 (345)
T ss_dssp             -------HHHHHHHHHHHHH----TTCTTB--CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHhc----CCCCCC--CcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHH
Confidence                   0112233333322    123332  2333222  3345899999999999998865322 1122233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+|+||+|||++       .+|      .++|+|||++..........     ....-.-.+.+.|.
T Consensus       129 ~a-L~~LH~~~ivHrDlkp~NIll~-------~~g------~vkL~DFG~a~~~~~~~~~~-----~~~~gt~~y~aPE~  189 (345)
T 1xjd_A          129 LG-LQFLHSKGIVYRDLKLDNILLD-------KDG------HIKIADFGMCKENMLGDAKT-----NTFCGTPDYIAPEI  189 (345)
T ss_dssp             HH-HHHHHHTTCBCCCCCGGGEEEC-------TTS------CEEECCCTTCBCCCCTTCCB-----CCCCSCGGGCCHHH
T ss_pred             HH-HHHHHHCCeEeCCCChhhEEEC-------CCC------CEEEeEChhhhhcccCCCcc-----cCCCCCcccCChhh
Confidence            44 8889999999999999999998       677      89999999988643211100     00011224566776


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +.. ..+....|.|+++..+.+++.+.
T Consensus       190 ~~~-~~~~~~~DiwslG~il~ell~g~  215 (345)
T 1xjd_A          190 LLG-QKYNHSVDWWSFGVLLYEMLIGQ  215 (345)
T ss_dssp             HTT-CCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             hcC-CCCCChhhhHHHHHHHHHHhcCC
Confidence            644 33455679999999999998873

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.63  E-value=5.8e-16  Score=156.18  Aligned_cols=204  Identities=13%  Similarity=0.074  Sum_probs=127.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...        |+.||||+.+......                        ...          
T Consensus         7 ~~~lg~G~~g~V~~~~~~~--------~~~~aiK~~~~~~~~~------------------------~~~----------   44 (288)
T 1ob3_A            7 LEKIGEGTYGVVYKAQNNY--------GETFALKKIRLEKEDE------------------------GIP----------   44 (288)
T ss_dssp             EEEEEEETTEEEEEEEETT--------SCEEEEEEECCSSGGG------------------------CCC----------
T ss_pred             hhhcccCCCEEEEEEEcCC--------CCEEEEEEEecccccc------------------------ccc----------
Confidence            5789999999999999843        6899999876542110                        000          


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                         -.+.+|.+.+.++     .+++  +++.+.-  .....++||||++| ++.+++.....  .......++..++.+ 
T Consensus        45 ---~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~-  112 (288)
T 1ob3_A           45 ---STTIREISILKEL-----KHSN--IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNG-  112 (288)
T ss_dssp             ---HHHHHHHHGGGGC-----CCTT--BCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHH-
T ss_pred             ---hhHHHHHHHHHhc-----CCCC--EeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHH-
Confidence               0122344333222     1222  2333322  23456899999998 88887754222  112223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||+||+++       .+|      +++|+|||++..+.......     ........+.++|.+..
T Consensus       113 l~~lH~~~i~H~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~  174 (288)
T 1ob3_A          113 IAYCHDRRVLHRDLKPQNLLIN-------REG------ELKIADFGLARAFGIPVRKY-----THEIVTLWYRAPDVLMG  174 (288)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEEC-------TTS------CEEECCTTHHHHHCC--------------CCCTTCCHHHHTT
T ss_pred             HHHHHHCCeecCCCCHHHEEEc-------CCC------CEEEeECccccccCcccccc-----ccccccccccCchheeC
Confidence            8889999999999999999998       677      89999999987765332211     11122345677787755


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      ........|.++++..+.+++.+.  +......+.+..+.+.
T Consensus       175 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  216 (288)
T 1ob3_A          175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI  216 (288)
T ss_dssp             CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            444556679999999999999873  4444555555554443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.62  E-value=3.9e-16  Score=160.15  Aligned_cols=204  Identities=12%  Similarity=0.091  Sum_probs=121.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+.+.......                        .           
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~------------------------~-----------   47 (317)
T 2pmi_A           10 LEKLGNGTYATVYKGLNKTT-------GVYVALKEVKLDSEEGT------------------------P-----------   47 (317)
T ss_dssp             ---------CEEEEEECSSS-------CCEEEEEEEECCSTTCS------------------------C-----------
T ss_pred             eeEECCCCCEEEEEEEECCC-------CcEEEEEEeeccccccc------------------------H-----------
Confidence            57899999999999998765       79999999765421100                        0           


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-------chhhHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-------HERLKSALAHI  439 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-------~~~~~~~la~~  439 (581)
                         -.+.+|.+.+.++     .+++  +++.+.-+  ....++||||++| +|.+++.....       .......++..
T Consensus        48 ---~~~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~q  116 (317)
T 2pmi_A           48 ---STAIREISLMKEL-----KHEN--IVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ  116 (317)
T ss_dssp             ---HHHHHHHHHHTTC-----CBTT--BCCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhc-----CCCC--cceEEEEEEECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHH
Confidence               0112344333322     1222  22333222  2345899999997 88888764321       11122334444


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      ++.+ +..||..|++|+|+||+||+++       .+|      +++|+|||++..+.......     ........+.++
T Consensus       117 i~~a-L~~lH~~~ivH~Dlkp~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~t~~y~aP  177 (317)
T 2pmi_A          117 LLQG-LAFCHENKILHRDLKPQNLLIN-------KRG------QLKLGDFGLARAFGIPVNTF-----SSEVVTLWYRAP  177 (317)
T ss_dssp             HHHH-HHHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCSSCEETTSCCCCC-----CCCCSCCTTCCH
T ss_pred             HHHH-HHHHHHCCeeeCCCChHHeEEc-------CCC------CEEECcCccceecCCCcccC-----CCCcccccccCc
Confidence            4444 7889999999999999999998       677      89999999998664221000     000112346677


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      |.+..........|.|+++..+.+++.+.  +......+.+..+.+.
T Consensus       178 E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  224 (317)
T 2pmi_A          178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDI  224 (317)
T ss_dssp             HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             hHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            77654344556679999999999999883  5555556666655554

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.62  E-value=1e-15  Score=156.59  Aligned_cols=188  Identities=12%  Similarity=0.050  Sum_probs=115.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+++.+       |+.||||+.........                                    
T Consensus        62 ~~~LG~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~------------------------------------   98 (311)
T 3p1a_A           62 LSRLGHGSYGEVFKVRSKED-------GRLYAVKRSMSPFRGPK------------------------------------   98 (311)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------SCEEEEEEESSSCCSHH------------------------------------
T ss_pred             eheeccCCCeEEEEEEECCC-------CeEEEEEEecccccChH------------------------------------
Confidence            56899999999999999864       79999998765422110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                       .+..+..|...+.+.    ..++++.-..-+.......+|||||++ .++.+++.....  .......++..++.+ +.
T Consensus        99 -~~~~~~~e~~~~~~~----~~h~~iv~l~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~a-L~  171 (311)
T 3p1a_A           99 -DRARKLAEVGSHEKV----GQHPCCVRLEQAWEEGGILYLQTELCG-PSLQQHCEAWGASLPEAQVWGYLRDTLLA-LA  171 (311)
T ss_dssp             -HHHHHHHHHHHHHHH----CCCTTBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHHCSCCCHHHHHHHHHHHHHH-HH
T ss_pred             -HHHHHHHHHHHHHHh----cCCCcEEEEEEEEEeCCEEEEEEeccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHH-HH
Confidence             001112232222221    123332211111222345589999995 477777654321  112223344444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+|+||+|||++       .++      .++|+|||++...+.......      ....-.+.++|.+.  +
T Consensus       172 ~LH~~~ivH~Dikp~NIll~-------~~~------~~kl~DFG~a~~~~~~~~~~~------~~gt~~y~aPE~~~--~  230 (311)
T 3p1a_A          172 HLHSQGLVHLDVKPANIFLG-------PRG------RCKLGDFGLLVELGTAGAGEV------QEGDPRYMAPELLQ--G  230 (311)
T ss_dssp             HHHHTTEECCCCSGGGEEEC-------GGG------CEEECCCTTCEECC------C------CCCCGGGCCGGGGG--T
T ss_pred             HHHHCCEecCCCCHHHEEEC-------CCC------CEEEccceeeeecccCCCCcc------cCCCccccCHhHhc--C
Confidence            89999999999999999998       677      899999999987765432211      01122455666543  3


Q ss_pred             CCCCCCCHHHHHHHHHHhhhH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ......|.++|+..+.+++.+
T Consensus       231 ~~~~~~DiwslG~il~el~~g  251 (311)
T 3p1a_A          231 SYGTAADVFSLGLTILEVACN  251 (311)
T ss_dssp             CCSTHHHHHHHHHHHHHHHHT
T ss_pred             CCCchhhHHHHHHHHHHHHhC
Confidence            455567999999999998876

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.62  E-value=2e-15  Score=150.78  Aligned_cols=192  Identities=16%  Similarity=0.136  Sum_probs=112.6

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|. .+.||+|++|.||+|+...+       |+.||||+..+....    +                      .+.    
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~----~----------------------~~~----   54 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESIHT-------GLEVAIKMIDKKAMY----K----------------------AGM----   54 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT-------CCEEEEEEEEHHHHH----H----------------------TTC----
T ss_pred             cceeeeeecCCCceEEEEEEEccC-------CceEEEEEeehhhhh----h----------------------hhH----
Confidence            344 68999999999999998764       699999987542100    0                      000    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIG  440 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~  440 (581)
                            .-.+.+|++.+.++     .+++  +++.+.  ......++||||++|.+|.+++.....  .......++..+
T Consensus        55 ------~~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi  121 (278)
T 3cok_A           55 ------VQRVQNEVKIHCQL-----KHPS--ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI  121 (278)
T ss_dssp             ------HHHHHHHHHHHTTB-----CCTT--BCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHhC-----CCCC--eEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHH
Confidence                  01233444443322     1222  233332  223445899999999999999865211  122223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||.||+++       .++      +++|+|||++..+.........     ......+.++|
T Consensus       122 ~~~-l~~lH~~~i~H~dl~p~Nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~~-----~~~~~~y~aPE  182 (278)
T 3cok_A          122 ITG-MLYLHSHGILHRDLTLSNLLLT-------RNM------NIKIADFGLATQLKMPHEKHYT-----LCGTPNYISPE  182 (278)
T ss_dssp             HHH-HHHHHHTTEECSSCCGGGEEEC-------TTC------CEEECCCTTCEECC------------------------
T ss_pred             HHH-HHHHHHCCeecCCCCHHHEEEc-------CCC------CEEEEeecceeeccCCCCccee-----ccCCCCcCCcc
Confidence            444 7889999999999999999998       667      8999999999887644322211     11223455666


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.. .......|.++|+..+.+++.+
T Consensus       183 ~~~~-~~~~~~~Di~slG~il~~l~~g  208 (278)
T 3cok_A          183 IATR-SAHGLESDVWSLGCMFYTLLIG  208 (278)
T ss_dssp             ----------CTHHHHHHHHHHHHHHS
T ss_pred             hhcC-CCCCchhhHHHHHHHHHHHHhC
Confidence            5543 3344567999999999999876

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.62  E-value=7.1e-16  Score=154.00  Aligned_cols=193  Identities=16%  Similarity=0.055  Sum_probs=122.4

Q ss_pred             hhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHH
Q 008021          283 IFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV  361 (581)
Q Consensus       283 iF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v  361 (581)
                      +...|. .+.||+|++|+||+|+.+.+       ++.||+|+..+...+.                             .
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~~a~k~~~~~~~~~-----------------------------~   50 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGT-------RIRRAAKKIPKYFVED-----------------------------V   50 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEEGGGCSC-----------------------------H
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCC-------CcEEEEEeehhhccch-----------------------------H
Confidence            333444 57899999999999999864       6899999876532111                             0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHH
Q 008021          362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAH  438 (581)
Q Consensus       362 ~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~  438 (581)
                                -.+.+|++.+.++     .+++  +++.+..  .....++||||++|.+|.+++..... .......++.
T Consensus        51 ----------~~~~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~  113 (277)
T 3f3z_A           51 ----------DRFKQEIEIMKSL-----DHPN--IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK  113 (277)
T ss_dssp             ----------HHHHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHhC-----CCCC--EeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHH
Confidence                      0123455444433     1232  3333322  23445899999999999988754322 2222334555


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ +..||..|++|+|+||.||++..++    .++      .++|+|||++..+.+.....      .......+.+
T Consensus       114 ~i~~~-l~~lH~~~i~H~dlkp~Nil~~~~~----~~~------~~~l~Dfg~~~~~~~~~~~~------~~~~t~~y~a  176 (277)
T 3f3z_A          114 DVLSA-VAYCHKLNVAHRDLKPENFLFLTDS----PDS------PLKLIDFGLAARFKPGKMMR------TKVGTPYYVS  176 (277)
T ss_dssp             HHHHH-HHHHHHTTEECCCCSGGGEEESSSS----TTC------CEEECCCTTCEECCTTSCBC------CCCSCTTTCC
T ss_pred             HHHHH-HHHHHHCCccCCCCCHHHEEEecCC----CCC------cEEEEecccceeccCccchh------ccCCCCCccC
Confidence            55544 8889999999999999999994111    445      89999999998765432110      0011223455


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|.+.  +......|.++++..+.+++.+
T Consensus       177 PE~~~--~~~~~~~Di~slG~~l~~l~~g  203 (277)
T 3f3z_A          177 PQVLE--GLYGPECDEWSAGVMMYVLLCG  203 (277)
T ss_dssp             HHHHT--TCBCTTHHHHHHHHHHHHHHHS
T ss_pred             hHHhc--ccCCchhhehhHHHHHHHHHHC
Confidence            56543  3355567889999988888876

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.62  E-value=1.7e-14  Score=148.83  Aligned_cols=146  Identities=20%  Similarity=0.269  Sum_probs=97.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+++.+  |  ..+..||||+.+.+.....                                    
T Consensus        54 ~~~lG~G~~g~V~~~~~~~~--~--~~~~~vavK~~~~~~~~~~------------------------------------   93 (325)
T 3kul_A           54 EKIIGSGDSGEVCYGRLRVP--G--QRDVPVAIKALKAGYTERQ------------------------------------   93 (325)
T ss_dssp             EEEEEETTTEEEEEEEECCT--T--SCCEEEEEEEECTTCCHHH------------------------------------
T ss_pred             eeEEEeCCCcEEEEEEEecC--C--CCCceEEEEecCCCCCHHH------------------------------------
Confidence            58899999999999999753  2  1256799999876532110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                        +-+|.+|+..+.++     .+++  +++.+.  ......++||||++|.+|.+++......  ......++..++.+ 
T Consensus        94 --~~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~-  163 (325)
T 3kul_A           94 --RRDFLSEASIMGQF-----DHPN--IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG-  163 (325)
T ss_dssp             --HHHHHHHHHHHTTC-----CCTT--BCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--CCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHH-
Confidence              11234555554433     1233  233332  2234458999999999999998643221  11223344444443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      +..||..|++|+|+||+|||++       .++      .++|+|||++..+..
T Consensus       164 L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          164 MRYLSDLGYVHRDLAARNVLVD-------SNL------VCKVSDFGLSRVLED  203 (325)
T ss_dssp             HHHHHHTTEECSCCSGGGEEEC-------TTC------CEEECCCSSCEECC-
T ss_pred             HHHHHHCCeeCCCCCcceEEEC-------CCC------CEEECCCCccccccc
Confidence            8889999999999999999998       667      899999999876543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.62  E-value=1.2e-15  Score=157.55  Aligned_cols=185  Identities=17%  Similarity=0.130  Sum_probs=98.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCch-----------hhHHHHHHHHHHHHHHhcc----ccccc
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG-----------ESIRRDFVIINLAAKISSV----IPAVK  353 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~-----------~~i~~Dl~il~~la~~~~~----~p~l~  353 (581)
                      .+.||+|++|+||+|+..         |+.||||+.++...           +.+.+++.+++.+..+...    .|.+-
T Consensus        25 ~~~lG~G~~g~V~~~~~~---------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv   95 (336)
T 2vuw_A           25 CEKIGEGVFGEVFQTIAD---------HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI   95 (336)
T ss_dssp             CEEEEEETTEEEEEEEET---------TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred             eeeecccCceEEEEEEeC---------CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence            578999999999999972         69999999876532           4455666666655432210    11110


Q ss_pred             cc-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhh
Q 008021          354 WL-RLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL  432 (581)
Q Consensus       354 ~l-~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~  432 (581)
                      .+ +.. .+.            .....|+.++.+.|.....-.-+.+-..-....+|||||++|+++.+.+.........
T Consensus        96 ~l~~~~-~~~------------~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~  162 (336)
T 2vuw_A           96 GLNSVH-CVQ------------GSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLAT  162 (336)
T ss_dssp             CEEEEE-EEE------------SSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHH
T ss_pred             hhccee-Eec------------CCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHH
Confidence            00 000 000            0000233333333332110000011011134457999999988654443221112222


Q ss_pred             HHHHHHHHHHHHHHHhh-hCCeEecCCCCCCEEEeeccccccccc-------ccCCCCeEEEEecccccccC
Q 008021          433 KSALAHIGTHALLKMLL-VDNFIHADMHPGNILVRVAQKKSSQKR-------LFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~-~~G~~H~DlHPGNILV~~~~~~~~~~g-------~~~~~~~lvLiDFGl~~~L~  496 (581)
                      ...++..++.+ +..|| ..|++||||||+|||++....+....+       .......++|+|||+++.+.
T Consensus       163 ~~~i~~qi~~a-L~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~  233 (336)
T 2vuw_A          163 AKSILHQLTAS-LAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER  233 (336)
T ss_dssp             HHHHHHHHHHH-HHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE
T ss_pred             HHHHHHHHHHH-HHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC
Confidence            34455555544 78899 899999999999999983210000000       00011279999999987653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.62  E-value=8.9e-16  Score=157.83  Aligned_cols=193  Identities=18%  Similarity=0.143  Sum_probs=120.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....  +....++.||||+.++.....                                     
T Consensus        52 ~~~lg~G~~g~Vy~~~~~~~--~~~~~~~~vavK~~~~~~~~~-------------------------------------   92 (343)
T 1luf_A           52 VRDIGEGAFGRVFQARAPGL--LPYEPFTMVAVKMLKEEASAD-------------------------------------   92 (343)
T ss_dssp             EEEEEECSSCEEEEEEEETS--STTSSEEEEEEEECCTTCCHH-------------------------------------
T ss_pred             eeeeeecCCeeEEEEEecCc--CCCCCceeEEEEEeccccCHH-------------------------------------
Confidence            57899999999999998742  111125899999987652211                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc------------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG------------------  428 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~------------------  428 (581)
                       ..-++.+|++.+.++     .+++  +++.+.  ......++||||++|.+|.+++.....                  
T Consensus        93 -~~~~~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T 1luf_A           93 -MQADFQREAALMAEF-----DNPN--IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS  164 (343)
T ss_dssp             -HHHHHHHHHHHHHTC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC------------------
T ss_pred             -HHHHHHHHHHHHHhC-----CCCC--EEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCccccccccccccccccccc
Confidence             011244566555443     1233  223332  233456899999999999999865211                  


Q ss_pred             -------chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHH
Q 008021          429 -------HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRV  501 (581)
Q Consensus       429 -------~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~  501 (581)
                             .......++..++++ +..||..|++|+|+||.||+++       .++      .++|+|||++..+......
T Consensus       165 ~~~~~~l~~~~~~~i~~qi~~~-l~~LH~~~ivH~Dlkp~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~~  230 (343)
T 1luf_A          165 SPGPPPLSCAEQLCIARQVAAG-MAYLSERKFVHRDLATRNCLVG-------ENM------VVKIADFGLSRNIYSADYY  230 (343)
T ss_dssp             ----CCCCHHHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCCSCHHHHTGGGCB
T ss_pred             ccCCCCCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCcceEEEC-------CCC------eEEEeecCCCcccccCccc
Confidence                   111112344444444 8889999999999999999998       677      8999999998766443210


Q ss_pred             HHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          502 NLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       502 ~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ...   ......-.+.++|.+.. .......|.++|+..+.++++
T Consensus       231 ~~~---~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t  271 (343)
T 1luf_A          231 KAD---GNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFS  271 (343)
T ss_dssp             C-------CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccc---CCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHh
Confidence            000   00000112455565543 334445688888888888876

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.62  E-value=2.1e-15  Score=152.01  Aligned_cols=203  Identities=18%  Similarity=0.150  Sum_probs=126.2

Q ss_pred             hhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          282 EIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       282 eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      ..++.|+ .+.||+|++|.||+|+.+.+       |+.||||+.++.-.....                        .+.
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~------------------------~~~   62 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPT-------CKEYAVKIIDVTGGGSFS------------------------AEE   62 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEEETTCSTTCC------------------------HHH
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCc-------CceEEEEEEecccccccC------------------------HHH
Confidence            3445555 68999999999999999865       799999998765211100                        011


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALA  437 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la  437 (581)
                      .+...+      .+.+|.+.+.++.    +++++  ++.+.  ......++||||++|.+|.+++..... .......++
T Consensus        63 ~~~~~~------~~~~e~~~l~~l~----~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  130 (298)
T 1phk_A           63 VQELRE------ATLKEVDILRKVS----GHPNI--IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM  130 (298)
T ss_dssp             HHHHHH------HHHHHHHHHHHHT----TCTTB--CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             HHHHHH------HHHHHHHHHHHhc----CCCCE--eeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHH
Confidence            111112      2334555554442    23332  23322  223446899999999999999865321 122223445


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..||..|++|+|++|.||+++       .+|      .++|+|||++..+.......      .......+.
T Consensus       131 ~qi~~~-l~~lH~~~i~H~dl~p~Nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~------~~~~~~~y~  190 (298)
T 1phk_A          131 RALLEV-ICALHKLNIVHRDLKPENILLD-------DDM------NIKLTDFGFSCQLDPGEKLR------EVCGTPSYL  190 (298)
T ss_dssp             HHHHHH-HHHHHHTTEECSCCSGGGEEEC-------TTC------CEEECCCTTCEECCTTCCBC------CCCSCGGGC
T ss_pred             HHHHHH-HHHHHHCCcccCCCCcceEEEc-------CCC------cEEEecccchhhcCCCcccc------cccCCcccc
Confidence            454444 7889999999999999999998       677      89999999998765432110      001122345


Q ss_pred             HHHHHHhh-----cCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRL-----SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l-----~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|.+...     .......|.++|+..+.+++.+
T Consensus       191 aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g  225 (298)
T 1phk_A          191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG  225 (298)
T ss_dssp             CHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CHHHhccccccccccCCcccccHhHHHHHHHHHHC
Confidence            55555421     2233456888888888888776

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.62  E-value=9.5e-16  Score=160.74  Aligned_cols=118  Identities=10%  Similarity=-0.015  Sum_probs=85.3

Q ss_pred             cEEEEeccCCccHHHHHHhhhc--chhhH------HHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeeccccccccccc
Q 008021          407 AVLVETYEQGECVSRYVDELQG--HERLK------SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF  478 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~--~~~~~------~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~  478 (581)
                      .+|||||++ .+|.+++.....  .....      ..++..++.+ +..||..|++|+||||+|||++       .+|  
T Consensus       163 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~a-L~~LH~~~ivHrDikp~NIll~-------~~~--  231 (371)
T 3q60_A          163 YLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRL-AANLQSKGLVHGHFTPDNLFIM-------PDG--  231 (371)
T ss_dssp             EEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHH-HHHHHHTTEEETTCSGGGEEEC-------TTS--
T ss_pred             EEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHH-HHHHHHCCCccCcCCHHHEEEC-------CCC--
Confidence            589999999 699999865311  11112      2344444444 8889999999999999999998       677  


Q ss_pred             CCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          479 RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       479 ~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                          .++|+|||++...+......        .....+.++|.+..- .......|.|+|+..+.+++.+
T Consensus       232 ----~~kL~DFG~a~~~~~~~~~~--------~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg  289 (371)
T 3q60_A          232 ----RLMLGDVSALWKVGTRGPAS--------SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL  289 (371)
T ss_dssp             ----CEEECCGGGEEETTCEEEGG--------GSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred             ----CEEEEecceeeecCCCccCc--------cCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence                89999999998776543211        123566778877431 2344567999999999999876

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.62  E-value=8.4e-16  Score=161.32  Aligned_cols=187  Identities=13%  Similarity=0.102  Sum_probs=115.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+...+....                                     
T Consensus        25 ~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~-------------------------------------   60 (361)
T 3uc3_A           25 VKDIGSGNFGVARLMRDKLT-------KELVAVKYIERGAAID-------------------------------------   60 (361)
T ss_dssp             EEEESSSTTSSEEEEEETTT-------CCEEEEEEEESSTTSC-------------------------------------
T ss_pred             EEEeccCCCEEEEEEEECCC-------CcEEEEEEEecCcccc-------------------------------------
Confidence            57899999999999999865       7999999976542100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|...+.++     .++++  ++.+.  ......++||||++|++|.+++..... .......++..++.+ +
T Consensus        61 ---~~~~~E~~~l~~l-----~hpni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~-L  129 (361)
T 3uc3_A           61 ---ENVQREIINHRSL-----RHPNI--VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSG-V  129 (361)
T ss_dssp             ---HHHHHHHHHHHHC-----CCTTB--CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhC-----CCCCC--CcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               0122344444333     12332  22222  223445899999999999998854322 122223444454444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.||+++       .++    .++++|+|||++..........      .....-.+.++|.+...
T Consensus       130 ~~LH~~~ivH~Dlkp~Nill~-------~~~----~~~~kl~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE~~~~~  192 (361)
T 3uc3_A          130 SYCHSMQICHRDLKLENTLLD-------GSP----APRLKICDFGYSKSSVLHSQPK------STVGTPAYIAPEVLLRQ  192 (361)
T ss_dssp             HHHHHTTCCSCCCCGGGEEEC-------SSS----SCCEEECCCCCC---------------------CTTSCHHHHHCS
T ss_pred             HHHHHCCcccCCCCHHHEEEc-------CCC----CceEEEeecCccccccccCCCC------CCcCCCCcCChhhhcCC
Confidence            889999999999999999998       333    1269999999987543322111      11233456677776543


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+++..+.+++.+
T Consensus       193 ~~~~~~~DiwslG~il~ell~g  214 (361)
T 3uc3_A          193 EYDGKIADVWSCGVTLYVMLVG  214 (361)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCeeeeehhHHHHHHHHhC
Confidence            3332336899999999998876

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.62  E-value=6.6e-16  Score=153.70  Aligned_cols=199  Identities=14%  Similarity=0.124  Sum_probs=114.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+.+.......                                    
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~------------------------------------   52 (289)
T 1x8b_A           16 LEKIGSGEFGSVFKCVKRLD-------GCIYAIKRSKKPLAGSV------------------------------------   52 (289)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEECCCTTSH------------------------------------
T ss_pred             hhhhcCCCceEEEEEEEcCC-------CceEEEEEecccccccH------------------------------------
Confidence            57899999999999999864       69999999876522110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i  441 (581)
                       .+.++.+|...+.++    ..++++  ++.+.  ......++||||++|.+|.+++.....     .......++..++
T Consensus        53 -~~~~~~~e~~~~~~l----~~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~  125 (289)
T 1x8b_A           53 -DEQNALREVYAHAVL----GQHSHV--VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG  125 (289)
T ss_dssp             -HHHHHHHHHHHHHHS----CSCTTB--CCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHh----CCCCCe--eeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHH
Confidence             112233444443332    123332  23322  223455899999999999999865321     1222234455554


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccc------cccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSS------QKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~------~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      .+ +..||..|++|+|+||.||+++.......      ..........++|+|||++...+......         ....
T Consensus       126 ~a-l~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~---------gt~~  195 (289)
T 1x8b_A          126 RG-LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---------GDSR  195 (289)
T ss_dssp             HH-HHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCCC---------CCGG
T ss_pred             HH-HHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccccC---------CCcc
Confidence            44 78899999999999999999982210000      00000123479999999988765432110         1223


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.++|.+..........|.++|+..+.+++.+
T Consensus       196 y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~  227 (289)
T 1x8b_A          196 FLANEVLQENYTHLPKADIFALALTVVCAAGA  227 (289)
T ss_dssp             GCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTC
T ss_pred             ccChhHhcCCCCCCchhhHHHHHHHHHHHhcC
Confidence            34444443221222244666666666666544

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.62  E-value=8.4e-16  Score=160.71  Aligned_cols=206  Identities=14%  Similarity=0.071  Sum_probs=132.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+..+......                                    
T Consensus        32 ~~~lG~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~------------------------------------   68 (364)
T 3qyz_A           32 LSYIGEGAYGMVCSAYDNLN-------KVRVAIKKISPFEHQTY------------------------------------   68 (364)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEECCTTCHHH------------------------------------
T ss_pred             EEEeecCCCeEEEEEEECCC-------CeEEEEEEeccccCcHH------------------------------------
Confidence            57899999999999998764       79999999875421110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-------CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-------LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-------l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i  441 (581)
                        .-.+.+|++.+.++.     ++++  ++.+.-       .....++||||++| +|.+++............++..++
T Consensus        69 --~~~~~~E~~~l~~l~-----h~ni--v~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~~~~~~~~~~~i~~qi~  138 (364)
T 3qyz_A           69 --CQRTLREIKILLRFR-----HENI--IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQIL  138 (364)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTB--CCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhcC-----CCCC--ccceeEEecCCccccceEEEEEcccCc-CHHHHHHhCCCCHHHHHHHHHHHH
Confidence              012334555554432     2222  222211       11345899999997 788877653222222334555555


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+|+||+||+++       .+|      .++|+|||++...+......-  ..........+.++|.
T Consensus       139 ~a-L~~LH~~~ivH~Dikp~NIl~~-------~~~------~~kl~Dfg~a~~~~~~~~~~~--~~~~~~gt~~y~aPE~  202 (364)
T 3qyz_A          139 RG-LKYIHSANVLHRDLKPSNLLLN-------TTC------DLKICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEI  202 (364)
T ss_dssp             HH-HHHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCTTCEECCGGGCBCC--TTCCCCSCGGGCCHHH
T ss_pred             HH-HHHHHHCCeecCCCChHhEEEC-------CCC------CEEEEeCcceEecCCCCCccc--cccccccccCCCCCHH
Confidence            44 8889999999999999999998       677      899999999987764321100  0000112334677787


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSN  563 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~  563 (581)
                      +..-.......|.++++..+.+++.+.  +......+.+..+.+
T Consensus       203 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  246 (364)
T 3qyz_A          203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG  246 (364)
T ss_dssp             HHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHH
T ss_pred             hcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHH
Confidence            766555566779999999999999873  444444455555443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.62  E-value=8.5e-16  Score=160.59  Aligned_cols=193  Identities=17%  Similarity=0.099  Sum_probs=121.5

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|.||+|+.+.+       |+.||||+.+......                          .+..+  
T Consensus        10 ~y~~~~~lG~G~fg~V~~~~~~~~-------~~~~aiK~~~~~~~~~--------------------------~~~~~--   54 (345)
T 3a8x_A           10 DFDLLRVIGRGSYAKVLLVRLKKT-------DRIYAMKVVKKELVND--------------------------DEDID--   54 (345)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEEEGGGSCS--------------------------HHHHH--
T ss_pred             heEEEEEEEecCCeEEEEEEECCC-------CCEEEEEEEEhHHhcc--------------------------hHHHH--
Confidence            344 57899999999999999875       7999999976532100                          00000  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                              .+.+|...+.++    .+++++  ++.+..  .....++||||++|++|.+++..... .......++..++
T Consensus        55 --------~~~~E~~~l~~~----~~hp~i--v~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~  120 (345)
T 3a8x_A           55 --------WVQTEKHVFEQA----SNHPFL--VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS  120 (345)
T ss_dssp             --------HHHHHHHHHHHT----TTCTTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHhc----CCCCcc--CeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHH
Confidence                    112333333322    123332  233322  23455899999999999998865321 1122233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+||||+|||++       .+|      .++|+|||++..........     ......-.+.++|.
T Consensus       121 ~a-L~~LH~~~ivHrDlkp~NIll~-------~~g------~~kL~DFG~a~~~~~~~~~~-----~~~~gt~~y~aPE~  181 (345)
T 3a8x_A          121 LA-LNYLHERGIIYRDLKLDNVLLD-------SEG------HIKLTDYGMCKEGLRPGDTT-----STFCGTPNYIAPEI  181 (345)
T ss_dssp             HH-HHHHHHTTCBCCCCCGGGEEEC-------TTS------CEEECCGGGCBCSCCTTCCB-----CCCCSCGGGCCHHH
T ss_pred             HH-HHHHHHCCceecCCCHHHEEEC-------CCC------CEEEEeccccccccCCCCcc-----cccCCCccccCccc
Confidence            44 8889999999999999999998       677      89999999988632211000     00011224566666


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. ..+....|.|+++..+.+++.+
T Consensus       182 ~~~-~~~~~~~DiwslG~il~ell~g  206 (345)
T 3a8x_A          182 LRG-EDYGFSVDWWALGVLMFEMMAG  206 (345)
T ss_dssp             HTT-CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             cCC-CCCChHHhHHHHHHHHHHHHhC
Confidence            644 3344567999999999998876

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.62  E-value=2.4e-15  Score=156.29  Aligned_cols=200  Identities=18%  Similarity=0.111  Sum_probs=126.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+........                               ...   
T Consensus        29 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~-------------------------------~~~---   67 (353)
T 3coi_A           29 PTHVGSGAYGSVCSAIDKRS-------GEKVAIKKLSRPFQSE-------------------------------IFA---   67 (353)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEESSTTSSH-------------------------------HHH---
T ss_pred             eeeEecCCCeEEEEEEECCC-------CCEEEEEEecccccch-------------------------------HHH---
Confidence            58899999999999999865       7999999976542110                               000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--------CCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--------HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--------t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~  440 (581)
                         -.+.+|...+.++.     ++++  .+.+.-+.        ...++||||++| +|.+++.. .-.......++..+
T Consensus        68 ---~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~i~~qi  135 (353)
T 3coi_A           68 ---KRAYRELLLLKHMQ-----HENV--IGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGL-KFSEEKIQYLVYQM  135 (353)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTTB--CCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTTS-CCCHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhcC-----CCCc--ccHhheEecccccccceeEEEEeccccC-CHHHHhcC-CCCHHHHHHHHHHH
Confidence               11234444444331     2222  22221111        123899999986 77766532 11122223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||+||+++       .+|      .++|+|||++...+....        .......+.++|
T Consensus       136 ~~a-l~~LH~~~ivH~dlkp~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~--------~~~~t~~y~aPE  193 (353)
T 3coi_A          136 LKG-LKYIHSAGVVHRDLKPGNLAVN-------EDC------ELKILDFGLARHADAEMT--------GYVVTRWYRAPE  193 (353)
T ss_dssp             HHH-HHHHHHTTCCCSSCCGGGEEEC-------TTC------CEEECSTTCTTC----------------CCSBCCSCHH
T ss_pred             HHH-HHHHHHCCcccCCCCHHHEeEC-------CCC------cEEEeecccccCCCCCcc--------ccccCcCcCCHH
Confidence            444 8889999999999999999998       677      899999999987654321        112234567777


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSN  563 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~  563 (581)
                      .+..........|.++++..+.+++.+.  +......+.+..+.+
T Consensus       194 ~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~  238 (353)
T 3coi_A          194 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK  238 (353)
T ss_dssp             HHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHH
T ss_pred             HHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            7765455566789999999999999873  555555555555544

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.62  E-value=7.7e-16  Score=160.63  Aligned_cols=192  Identities=15%  Similarity=0.086  Sum_probs=119.6

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|+||+|+.+.+       |+.||||+.+......                      .    +     
T Consensus         6 ~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vaiK~~~~~~~~~----------------------~----~-----   47 (337)
T 1o6l_A            6 DFDYLKLLGKGTFGKVILVREKAT-------GRYYAMKILRKEVIIA----------------------K----D-----   47 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT-------CCEEEEEEEEHHHHHH----------------------T----T-----
T ss_pred             HeEEEEEEecCCCeEEEEEEECCC-------CCEEEEEEEeHHHhhh----------------------h----h-----
Confidence            344 57899999999999999865       7999999976431000                      0    0     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                           ..-.+.+|.+.+.++     .++.  +++.+..+  ....++||||++|++|.+++..... .......++..++
T Consensus        48 -----~~~~~~~E~~~l~~l-----~hp~--iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~  115 (337)
T 1o6l_A           48 -----EVAHTVTESRVLQNT-----RHPF--LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV  115 (337)
T ss_dssp             -----CHHHHHHHHHHHHSC-----CCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHhC-----CCCc--CcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHH
Confidence                 001123344444322     1232  23333222  3445899999999999988864322 1122233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+|+||.|||++       .+|      .++|+|||++..........     ....-.-.+.++|.
T Consensus       116 ~a-L~~LH~~~ivHrDlkp~NIll~-------~~g------~vkL~DFG~a~~~~~~~~~~-----~~~~gt~~y~aPE~  176 (337)
T 1o6l_A          116 SA-LEYLHSRDVVYRDIKLENLMLD-------KDG------HIKITDFGLCKEGISDGATM-----KTFCGTPEYLAPEV  176 (337)
T ss_dssp             HH-HHHHHHTTCBCCCCCGGGEEEC-------TTS------CEEECCCTTCBCSCCTTCCB-----CCCEECGGGCCGGG
T ss_pred             HH-HHHHHHCCeecCcCCHHHEEEC-------CCC------CEEEeeccchhhcccCCCcc-----cccccChhhCChhh
Confidence            43 8889999999999999999998       677      89999999987643211000     00011123455555


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. ..+....|.|+++..+.+++.+
T Consensus       177 ~~~-~~~~~~~DiwslG~il~ell~g  201 (337)
T 1o6l_A          177 LED-NDYGRAVDWWGLGVVMYEMMCG  201 (337)
T ss_dssp             GSS-SCBCTTHHHHHHHHHHHHHHHS
T ss_pred             hcC-CCCCchhhcccchhHHHHHhcC
Confidence            432 3345577999999999998876

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.62  E-value=1.5e-15  Score=154.30  Aligned_cols=141  Identities=12%  Similarity=-0.002  Sum_probs=94.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+.++.....                          ++..       
T Consensus        36 ~~~lg~G~~g~Vy~a~~~~~-------~~~vavK~~~~~~~~~--------------------------~~~~-------   75 (286)
T 3uqc_A           36 LIFHGGVPPLQFWQALDTAL-------DRQVALTFVDPQGVLP--------------------------DDVL-------   75 (286)
T ss_dssp             EEEEEBSTTCEEEEEEETTT-------TEEEEEEESCTTCCSC--------------------------HHHH-------
T ss_pred             EEEEcccCCeEEEEEEecCC-------CceEEEEEECcccccC--------------------------HHHH-------
Confidence            58999999999999999765       7999999988763211                          0111       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                         -.+.+|+..+.++     .+++  +++.+.  ......++||||++|.+|.++++.. ........++..++.+ +.
T Consensus        76 ---~~~~~e~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~i~~ql~~a-L~  143 (286)
T 3uqc_A           76 ---QETLSRTLRLSRI-----DKPG--VARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS-PSPVGAIRAMQSLAAA-AD  143 (286)
T ss_dssp             ---HHHHHHHHHHHTC-----CCTT--BCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC-CCHHHHHHHHHHHHHH-HH
T ss_pred             ---HHHHHHHHHHhcC-----CCCC--cceeeEEEEECCcEEEEEEecCCCCHHHHHhcC-CChHHHHHHHHHHHHH-HH
Confidence               1234455444332     2233  333332  2334568999999999999998542 1111223344444433 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE  494 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~  494 (581)
                      .+|..|++|+|+||+|||++       .+|      .++|.++|....
T Consensus       144 ~lH~~givH~Dikp~NIll~-------~~g------~~kl~~~~~~~~  178 (286)
T 3uqc_A          144 AAHRAGVALSIDHPSRVRVS-------IDG------DVVLAYPATMPD  178 (286)
T ss_dssp             HHHHTTCCCCCCSGGGEEEE-------TTS------CEEECSCCCCTT
T ss_pred             HHHHCCCccCCCCcccEEEc-------CCC------CEEEEeccccCC
Confidence            89999999999999999999       677      888887776543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.61  E-value=1.7e-15  Score=154.88  Aligned_cols=191  Identities=17%  Similarity=0.165  Sum_probs=118.5

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ..|+ .+.||+|++|.||+|+...+       |+.||||+....-...                                
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~--------------------------------   64 (326)
T 2x7f_A           24 GIFELVELVGNGTYGQVYKGRHVKT-------GQLAAIKVMDVTGDEE--------------------------------   64 (326)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEECCSSTT--------------------------------
T ss_pred             CcEEEEEEeccCCCEEEEEEEECCC-------CCeEEEEEEecCcccH--------------------------------
Confidence            3344 58999999999999999764       7999999976542110                                


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--------CCCcEEEEeccCCccHHHHHHhhhcc---hhh
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--------VHPAVLVETYEQGECVSRYVDELQGH---ERL  432 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--------~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~  432 (581)
                              -++.+|...+.++.    .++++  ++.+..+        ....++||||++|.+|.+++......   ...
T Consensus        65 --------~~~~~e~~~l~~l~----~h~~i--~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  130 (326)
T 2x7f_A           65 --------EEIKQEINMLKKYS----HHRNI--ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW  130 (326)
T ss_dssp             --------HHHHHHHHHHHHHC----CSTTB--CCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHH
T ss_pred             --------HHHHHHHHHHHhcc----CCCCe--eeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHH
Confidence                    11233444444331    22222  2222111        23458999999999999998653211   111


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh
Q 008021          433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR  512 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~  512 (581)
                      ...++..++.+ +..||..|++|+|+||+||+++       .+|      .++|+|||++..+.......     .....
T Consensus       131 ~~~i~~qi~~~-l~~lH~~~ivH~dlkp~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~  191 (326)
T 2x7f_A          131 IAYICREILRG-LSHLHQHKVIHRDIKGQNVLLT-------ENA------EVKLVDFGVSAQLDRTVGRR-----NTFIG  191 (326)
T ss_dssp             HHHHHHHHHHH-HHHHHHTTCCCCCCSGGGEEEC-------TTC------CEEECCCTTTC------------------C
T ss_pred             HHHHHHHHHHH-HHHHHHCCccccCCcHHHEEEc-------CCC------CEEEeeCcCceecCcCcccc-----ccccC
Confidence            23344444443 8889999999999999999998       667      89999999998765432111     11123


Q ss_pred             hcHHHHHHHHHh----hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          513 RDGRTAAECTLR----LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       513 ~D~~~~~e~ll~----l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ...+.++|.+..    -.......|.++|+..+.+++.+
T Consensus       192 ~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g  230 (326)
T 2x7f_A          192 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG  230 (326)
T ss_dssp             CGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHS
T ss_pred             CccccChhhhccccccCcCCCccchHHHHHHHHHHHHhC
Confidence            345666776642    23344567999999999999876

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.61  E-value=2.3e-15  Score=154.21  Aligned_cols=197  Identities=16%  Similarity=0.072  Sum_probs=123.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.++.....-                     ..          ...
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~---------------------~~----------~~~   56 (322)
T 2ycf_A           15 SKTLGSGACGEVKLAFERKT-------CKKVAIKIISKRKFAIG---------------------SA----------REA   56 (322)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEECC------------------------------------------
T ss_pred             eeEEecCCCEEEEEEEEcCC-------CcEEEEEEeehhhhhhc---------------------cc----------ccc
Confidence            57899999999999999865       79999999876421000                     00          000


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                      ....++.+|...+.++     .+++  +++.+.-+ ....++||||++|.+|.+++..... .......++..++.+ +.
T Consensus        57 ~~~~~~~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~-l~  128 (322)
T 2ycf_A           57 DPALNVETEIEILKKL-----NHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA-VQ  128 (322)
T ss_dssp             ----CHHHHHHHHHHC-----CCTT--BCCEEEEEESSSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHH-HH
T ss_pred             hhhhhHHHHHHHHHhC-----CCCC--CceEeeEEcCCceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHH-HH
Confidence            0112345566555544     1222  22222211 2346899999999999998754221 111223344444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh-
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL-  525 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l-  525 (581)
                      .||..|++|+|+||.||+++       .++   ....++|+|||++..+......      ........+.+.|.+... 
T Consensus       129 ~lH~~~ivH~dlkp~NIl~~-------~~~---~~~~~kl~Dfg~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~  192 (322)
T 2ycf_A          129 YLHENGIIHRDLKPENVLLS-------SQE---EDCLIKITDFGHSKILGETSLM------RTLCGTPTYLAPEVLVSVG  192 (322)
T ss_dssp             HHHHTTEECCCCSGGGEEES-------SSS---SSCCEEECCCTTCEECCCCHHH------HHHHSCCTTCCHHHHHHTT
T ss_pred             HHHHCCeeccCCCHHHEEEe-------cCC---CCCeEEEccCccceeccccccc------ccccCCcCccCchhhccCC
Confidence            89999999999999999998       322   0126999999999887654321      122344566778877543 


Q ss_pred             -cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 -SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 -~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .......|.++|+..+.+++.+
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g  215 (322)
T 2ycf_A          193 TAGYNRAVDCWSLGVILFICLSG  215 (322)
T ss_dssp             TTTCTTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCchhhHHHHHHHHHHHHhC
Confidence             3344567999999999999877

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.61  E-value=1.1e-15  Score=151.77  Aligned_cols=193  Identities=18%  Similarity=0.166  Sum_probs=111.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+..         |+.||||+.+........                         +..       
T Consensus        12 ~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~-------------------------~~~-------   50 (271)
T 3dtc_A           12 EEIIGIGGFGKVYRAFWI---------GDEVAVKAARHDPDEDIS-------------------------QTI-------   50 (271)
T ss_dssp             EEEEEEETTEEEEEEEET---------TEEEEEEEC-----------------------------------CH-------
T ss_pred             eeeeccCCCeEEEEEEEc---------CCeEEEEEEecCCcccHH-------------------------HHH-------
Confidence            679999999999999974         589999997654211100                         000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                         -.+.+|.+.+.++.     ++++  ++.+.  ......++||||++|.+|.+++............++..++.+ +.
T Consensus        51 ---~~~~~e~~~l~~l~-----h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~-l~  119 (271)
T 3dtc_A           51 ---ENVRQEAKLFAMLK-----HPNI--IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARG-MN  119 (271)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTTB--CCEEEEECCC--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHH-HH
T ss_pred             ---HHHHHHHHHHHhcC-----CCCE--eeEEEEEecCCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHH-HH
Confidence               12344544444331     2332  23322  223456899999999999998854322222233445555444 88


Q ss_pred             HhhhCC---eEecCCCCCCEEEeeccccc-ccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          447 MLLVDN---FIHADMHPGNILVRVAQKKS-SQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       447 ~L~~~G---~~H~DlHPGNILV~~~~~~~-~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      .||..|   ++|+|+||+||+++....+. ..++      .++|+|||++..+........       .....+.++|.+
T Consensus       120 ~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~------~~kl~Dfg~~~~~~~~~~~~~-------~~~~~y~aPE~~  186 (271)
T 3dtc_A          120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK------ILKITDFGLAREWHRTTKMSA-------AGAYAWMAPEVI  186 (271)
T ss_dssp             HHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSC------CEEECCCCC--------------------CCGGGSCHHHH
T ss_pred             HHHhCCCCceeecCCchHHEEEecccccccccCc------ceEEccCCcccccccccccCC-------CCccceeCHHHh
Confidence            899999   99999999999998211100 0133      899999999987655433221       223345566665


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. .......|.++|+..+.+++.+
T Consensus       187 ~~-~~~~~~~Di~slG~~l~~l~~g  210 (271)
T 3dtc_A          187 RA-SMFSKGSDVWSYGVLLWELLTG  210 (271)
T ss_dssp             HH-CCCSHHHHHHHHHHHHHHHHHC
T ss_pred             cc-CCCCchhhHHHHHHHHHHHHhC
Confidence            43 3344456889999999988876

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.61  E-value=1.8e-15  Score=159.34  Aligned_cols=210  Identities=16%  Similarity=0.090  Sum_probs=130.4

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ..|+ .+.||+|++|+||+|+.+.+       |+.||||+.+..-.                                  
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~----------------------------------   92 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDRVE-------QEWVAIKIIKNKKA----------------------------------   92 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTT-------TEEEEEEEECSSHH----------------------------------
T ss_pred             eeEEEEEEEeecCCEEEEEEEEcCC-------CcEEEEEEEeccHH----------------------------------
Confidence            3444 57899999999999999765       79999999765310                                  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAH  438 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~  438 (581)
                      +..      ++..|.+.+..+... .......++..+..  .....+|||||++| +|.+++.....   .......++.
T Consensus        93 ~~~------~~~~e~~~l~~l~~~-~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~  164 (382)
T 2vx3_A           93 FLN------QAQIEVRLLELMNKH-DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQ  164 (382)
T ss_dssp             HHH------HHHHHHHHHHHHHHC-SSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred             HHH------HHHHHHHHHHHHHhc-ccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHH
Confidence            000      112333333333221 00011122222221  23455799999987 88888765321   1222234444


Q ss_pred             HHHHHHHHHhh--hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          439 IGTHALLKMLL--VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       439 ~~i~a~l~~L~--~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      .++.+ +..+|  ..|++|+|+||+|||+..+     .++      .++|+|||++..++.....        ......+
T Consensus       165 qi~~a-l~~lH~~~~~ivHrDlkp~NIll~~~-----~~~------~~kL~DFG~a~~~~~~~~~--------~~~t~~y  224 (382)
T 2vx3_A          165 QMCTA-LLFLATPELSIIHCDLKPENILLCNP-----KRS------AIKIVDFGSSCQLGQRIYQ--------YIQSRFY  224 (382)
T ss_dssp             HHHHH-HHHHTSTTTCEECCCCSGGGEEESST-----TSC------CEEECCCTTCEETTCCCCS--------SCSCGGG
T ss_pred             HHHHH-HHHhccCCCCEEcCCCCcccEEEecC-----CCC------cEEEEeccCceeccccccc--------ccCCccc
Confidence            44444 66777  5799999999999999610     244      7999999999876543211        1123346


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      .++|.+... ......|.|+|+..+.+++.+.  +......+++..+.+.
T Consensus       225 ~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  273 (382)
T 2vx3_A          225 RSPEVLLGM-PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV  273 (382)
T ss_dssp             CCHHHHTTC-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             cChHHHcCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            777877553 3455779999999999999883  5555555666555554

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.61  E-value=1.2e-15  Score=157.30  Aligned_cols=214  Identities=14%  Similarity=0.079  Sum_probs=129.1

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      +..|. .+.||+|++|.||+|+...+       |+.||||+.+......                               
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~-------------------------------   74 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVT-------NETVAIKRIRLEHEEE-------------------------------   74 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTT-------TEEEEEEECCCCC----------------------------------
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCC-------CceEEEEEEccccccc-------------------------------
Confidence            44455 68999999999999998765       7999999976542110                               


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHI  439 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~  439 (581)
                      ..      .-.+.+|.+.+.++     .++++  .+.+.  ......+|||||++| +|.+++..... .......++..
T Consensus        75 ~~------~~~~~~E~~~l~~l-----~h~~i--v~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~q  140 (329)
T 3gbz_A           75 GV------PGTAIREVSLLKEL-----QHRNI--IELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQ  140 (329)
T ss_dssp             -----------CHHHHHHGGGC-----CCTTB--CCEEEEEEETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHH
T ss_pred             cc------chhHHHHHHHHHHc-----CCCCc--ceEEEEEecCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHH
Confidence            00      00112344433322     12222  22222  223455899999997 88888765322 11222334444


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      ++.+ +..||..|++|+|+||+|||+.....+  .++      .++|+|||++..++......     ........+.++
T Consensus       141 l~~~-l~~LH~~~ivH~Dlkp~NIll~~~~~~--~~~------~~kl~Dfg~a~~~~~~~~~~-----~~~~~t~~y~aP  206 (329)
T 3gbz_A          141 LING-VNFCHSRRCLHRDLKPQNLLLSVSDAS--ETP------VLKIGDFGLARAFGIPIRQF-----THEIITLWYRPP  206 (329)
T ss_dssp             HHHH-HHHHHHTTCCCSCCCGGGEEEEC-------CC------EEEECCTTHHHHHC----------------CCTTCCH
T ss_pred             HHHH-HHHHHhCCEECCCCCHHHEEEecCCCC--ccc------eEEECcCCCccccCCccccc-----CCCcCCccccCH
Confidence            4444 888999999999999999999722110  233      79999999998765432221     111224456788


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHH
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSN  563 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~  563 (581)
                      |.+..........|.++++..+.+++.+.  +......+.+..+.+
T Consensus       207 E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  252 (329)
T 3gbz_A          207 EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE  252 (329)
T ss_dssp             HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             HHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHH
Confidence            88765444566779999999999999873  444444444444443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.61  E-value=3.7e-14  Score=142.05  Aligned_cols=139  Identities=20%  Similarity=0.244  Sum_probs=96.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||||+.+++-..                              .       
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~------------------------------~-------   53 (288)
T 3kfa_A           18 KHKLGGGQYGEVYEGVWKKY-------SLTVAVKTLKEDTME------------------------------V-------   53 (288)
T ss_dssp             EEESGGGTTCSEEEEEEGGG-------TEEEEEEEECSCSTH------------------------------H-------
T ss_pred             EeecCCCCceeEEEeEecCC-------CEEEEEEecCcCHHH------------------------------H-------
Confidence            57899999999999999875       799999998754211                              0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a  443 (581)
                         -++.+|.+.+.++.     +++  +++.+.  ......++||||++|.+|.+++......   ......++..++.+
T Consensus        54 ---~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~  123 (288)
T 3kfa_A           54 ---EEFLKEAAVMKEIK-----HPN--LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA  123 (288)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTT--BCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhCC-----CCC--EeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHH
Confidence               12334555554432     222  223322  2234458999999999999998652221   11222344444443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                       +..||..|++|+|+||.||+++       .++      .++|+|||++...
T Consensus       124 -l~~lH~~~i~H~dikp~Nil~~-------~~~------~~~l~Dfg~~~~~  161 (288)
T 3kfa_A          124 -MEYLEKKNFIHRDLAARNCLVG-------ENH------LVKVADFGLSRLM  161 (288)
T ss_dssp             -HHHHHHHTCCCSCCSGGGEEEC-------GGG------CEEECCCCGGGTS
T ss_pred             -HHHHHHCCccCCCCCcceEEEc-------CCC------CEEEccCccceec
Confidence             8889999999999999999998       677      8999999988644

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.61  E-value=2.5e-14  Score=147.05  Aligned_cols=75  Identities=16%  Similarity=0.249  Sum_probs=58.5

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhC----------CeEecCCCCCCEEEeeccccccccc
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD----------NFIHADMHPGNILVRVAQKKSSQKR  476 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~----------G~~H~DlHPGNILV~~~~~~~~~~g  476 (581)
                      -++||||++|++|.+++............++..++.+ +..||..          |++|+|+||.|||++       .++
T Consensus        97 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~a-l~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~-------~~~  168 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARG-LAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK-------NNL  168 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHH-HHHHTCCEEEETTEEECEEECSCCSGGGEEEC-------TTC
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHhhccccccccCCCEEeCCCChHhEEEC-------CCC
Confidence            3799999999999999865332323334455554444 7888988          999999999999998       667


Q ss_pred             ccCCCCeEEEEeccccccc
Q 008021          477 LFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       477 ~~~~~~~lvLiDFGl~~~L  495 (581)
                            .++|+|||++..+
T Consensus       169 ------~~kL~DFg~a~~~  181 (322)
T 3soc_A          169 ------TACIADFGLALKF  181 (322)
T ss_dssp             ------CEEECCCTTCEEE
T ss_pred             ------eEEEccCCccccc
Confidence                  8999999998654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.61  E-value=1.8e-15  Score=155.81  Aligned_cols=208  Identities=17%  Similarity=0.077  Sum_probs=127.3

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      +.|+ .+.||+|++|.||+|+...+       |+.||||+.........                            .  
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~----------------------------~--   67 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDT-------GRIVAIKKFLESDDDKM----------------------------V--   67 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTT-------CCEEEEEEEESCSSCHH----------------------------H--
T ss_pred             hhheeeeEEeecCCEEEEEEEECCC-------CceEEEEEEecCCCchH----------------------------H--
Confidence            3344 57999999999999999875       79999998765421110                            0  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                             +-.+.+|.+.+.++.     +++  +++.+.-  .....++||||++|.++.++...... .......++..+
T Consensus        68 -------~~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi  133 (331)
T 4aaa_A           68 -------KKIAMREIKLLKQLR-----HEN--LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI  133 (331)
T ss_dssp             -------HHHHHHHHHHHHHCC-----CTT--BCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHhhCC-----CCC--EeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHH
Confidence                   011234554444331     232  2333322  23445899999999999987643221 112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||+||+++       .+|      .++|+|||++..+.......     ........+.++|
T Consensus       134 ~~~-l~~LH~~~ivH~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~t~~y~aPE  194 (331)
T 4aaa_A          134 ING-IGFCHSHNIIHRDIKPENILVS-------QSG------VVKLCDFGFARTLAAPGEVY-----DDEVATRWYRAPE  194 (331)
T ss_dssp             HHH-HHHHHHTTCCCCCCCGGGEEEC-------TTS------CEEECCCTTC-----------------CCCCCTTCCHH
T ss_pred             HHH-HHHHHHCCEEccCcChheEEEc-------CCC------cEEEEeCCCceeecCCcccc-----CCCcCCccccCcc
Confidence            444 7889999999999999999998       667      89999999998765432211     1111233456777


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACS  562 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~  562 (581)
                      .+..-.......|.++++..+.+++.+.  +......+.+..+.
T Consensus       195 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  238 (331)
T 4aaa_A          195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM  238 (331)
T ss_dssp             HHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             cccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            7654334455679999999999999873  43444444444333

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.61  E-value=4.8e-16  Score=166.19  Aligned_cols=192  Identities=17%  Similarity=0.091  Sum_probs=122.0

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      .+|+ .+.||+|++|.||+|+.+.+       |+.||||+.+......                          .+.+  
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~-------~~~~AvK~~~k~~~~~--------------------------~~~~--   96 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKT-------DRIYAMRVVKKELVND--------------------------DEDI--   96 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEEEGGGTC------------------------------C--
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCC-------CCEEEEEEEEhhhccC--------------------------HHHH--
Confidence            3455 57999999999999999875       7999999976542100                          0000  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                              -.+..|...+.++.    +++++  ++.+..  .....+|||||++|++|.+++..... .......++..+
T Consensus        97 --------~~~~~E~~il~~~~----~hp~I--v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi  162 (396)
T 4dc2_A           97 --------DWVQTEKHVFEQAS----NHPFL--VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI  162 (396)
T ss_dssp             --------CHHHHHHHHHHHHT----TCTTB--CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHhcC----CCCCc--CeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHH
Confidence                    01123433333221    23332  223222  23445899999999999988865322 112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC-HhhH-HHHHHHHHHHHhhcHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS-KTDR-VNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~-~~~r-~~l~~l~~Al~~~D~~~~  518 (581)
                      +.+ +..||..|++||||||+|||++       .+|      .++|+|||++.... .... ..+       .-.-.+.+
T Consensus       163 ~~a-L~~LH~~givHrDLKp~NILl~-------~~g------~ikL~DFGla~~~~~~~~~~~~~-------~gt~~Y~a  221 (396)
T 4dc2_A          163 SLA-LNYLHERGIIYRDLKLDNVLLD-------SEG------HIKLTDYGMCKEGLRPGDTTSTF-------CGTPNYIA  221 (396)
T ss_dssp             HHH-HHHHHHTTCBCCCCCGGGEEEC-------TTS------CEEECCCTTCBCCCCTTCCBCCC-------CBCGGGCC
T ss_pred             HHH-HHHHHHCCEEeccCCHHHEEEC-------CCC------CEEEeecceeeecccCCCccccc-------cCCcccCC
Confidence            443 8889999999999999999998       777      89999999997632 2111 111       11224566


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +|.+.. ..+....|.|+++..+.+++.+
T Consensus       222 PE~l~~-~~~~~~~DiwslGvllyell~G  249 (396)
T 4dc2_A          222 PEILRG-EDYGFSVDWWALGVLMFEMMAG  249 (396)
T ss_dssp             HHHHTT-CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             chhhcC-CCCChHHHHHHHHHHHHHHHhC
Confidence            776644 3344567999999999998876

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.61  E-value=2.5e-15  Score=152.47  Aligned_cols=149  Identities=17%  Similarity=0.155  Sum_probs=96.7

Q ss_pred             hhhhccCC--ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          281 SEIFDGFE--EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       281 ~eiF~~fd--~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      ++++..+.  .+.||+|++|.||+|+.+.+       |+.||||+.+..  ..                           
T Consensus        13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~--~~---------------------------   56 (299)
T 3m2w_A           13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRT-------QEKFALKMLQDC--PK---------------------------   56 (299)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEECS--HH---------------------------
T ss_pred             cccccchhhcCcccccCCCeEEEEEEEcCC-------CcEEEEEEeccc--HH---------------------------
Confidence            34555554  36899999999999999765       799999987532  01                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC------CCCcEEEEeccCCccHHHHHHhhhc---c
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL------VHPAVLVETYEQGECVSRYVDELQG---H  429 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l------~t~~VLVmEyi~G~~L~~~l~~~~~---~  429 (581)
                                     +.+|...+.+..    .+++  +++.+.-+      ....++||||++|.+|.+++.....   .
T Consensus        57 ---------------~~~e~~~~~~~~----~h~~--i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  115 (299)
T 3m2w_A           57 ---------------ARREVELHWRAS----QCPH--IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT  115 (299)
T ss_dssp             ---------------HHHHHHHHHHHT----TSTT--BCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCB
T ss_pred             ---------------HHHHHHHHHHhc----cCCC--chhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCC
Confidence                           112222221111    2222  22222111      2234799999999999999875321   1


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      ......++..++.+ +..||..|++|+|+||.||+++...    .++      .++|+|||++..+..
T Consensus       116 ~~~~~~i~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~~~----~~~------~~kl~Dfg~a~~~~~  172 (299)
T 3m2w_A          116 EREASEIMKSIGEA-IQYLHSINIAHRDVKPENLLYTSKR----PNA------ILKLTDFGFAKETTG  172 (299)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEESSSS----TTC------CEEECCCTTCEECTT
T ss_pred             HHHHHHHHHHHHHH-HHHHHhCCcccCCCCHHHEEEecCC----CCC------cEEEecccccccccc
Confidence            22223344444444 8889999999999999999998210    145      899999999987765

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=7.5e-16  Score=161.06  Aligned_cols=201  Identities=15%  Similarity=0.051  Sum_probs=121.3

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|+ .+.||+|++|+||+|+.....    ..|+.||||+.+......                   .  ....       
T Consensus        55 ~y~~~~~lG~G~~g~Vy~~~~~~~~----~~~~~vavK~~~~~~~~~-------------------~--~~~~-------  102 (355)
T 1vzo_A           55 NFELLKVLGTGAYGKVFLVRKISGH----DTGKLYAMKVLKKATIVQ-------------------K--AKTT-------  102 (355)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSST----TTTCEEEEEEESEEEEEE-------------------E--ESSG-------
T ss_pred             ceEEEEEeccCCCEEEEEEEEcccC----CCCeEEEEEEEeHHHhhh-------------------h--hhHH-------
Confidence            344 578999999999999985310    127999999976431100                   0  0000       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHA  443 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a  443 (581)
                             -.+.+|.+.+.++.    .++++.-...+.......+|||||++|.+|.+++..... .......++..++.+
T Consensus       103 -------~~~~~E~~~l~~l~----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~a  171 (355)
T 1vzo_A          103 -------EHTRTERQVLEHIR----QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA  171 (355)
T ss_dssp             -------GGCCCHHHHHHHHH----TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHcc----CCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence                   01122444444332    223222111112223455799999999999999865322 111222334444443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..||..|++|+|+||.|||++       .+|      +++|+|||++..+.........    ...-.-.+.+.|.+.
T Consensus       172 -L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kl~DfG~a~~~~~~~~~~~~----~~~gt~~y~aPE~~~  233 (355)
T 1vzo_A          172 -LEHLHKLGIIYRDIKLENILLD-------SNG------HVVLTDFGLSKEFVADETERAY----DFCGTIEYMAPDIVR  233 (355)
T ss_dssp             -HHHHHHTTCCCCCCCGGGEEEC-------TTS------CEEESCSSEEEECCGGGGGGGC----GGGSCCTTCCHHHHT
T ss_pred             -HHHHHHCCcccCCCCHHHEEEC-------CCC------cEEEeeCCCCeecccCCCCccc----CcccCcCccChhhhc
Confidence             8889999999999999999998       677      8999999999876543321110    011233456677665


Q ss_pred             hh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .- .......|.++|+..+.+++.+
T Consensus       234 ~~~~~~~~~~DvwslG~il~ell~g  258 (355)
T 1vzo_A          234 GGDSGHDKAVDWWSLGVLMYELLTG  258 (355)
T ss_dssp             TCC---CTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCchhhHHHHHHHHHHHHHC
Confidence            31 2233456999999999999877

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.61  E-value=2.8e-16  Score=158.29  Aligned_cols=196  Identities=19%  Similarity=0.158  Sum_probs=111.7

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .++ .+.||+|++|.||+|+...+       |+.||||+........                            ..   
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~----------------------------~~---   57 (303)
T 2vwi_A           16 DYELQEVIGSGATAVVQAAYCAPK-------KEKVAIKRINLEKCQT----------------------------SM---   57 (303)
T ss_dssp             CCEEEEECC---CCCEEEEEC-----------CEEEEECCC---------------------------------------
T ss_pred             hhhhhheeccccceEEEEEEECCC-------CcEEEEEEEEhhhcch----------------------------hH---
Confidence            444 68999999999999998764       6999999865431100                            00   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhh---------cchhhH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQ---------GHERLK  433 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~---------~~~~~~  433 (581)
                             -++.+|...+.++     .+++  +++.+.  ......++||||++|.+|.+++....         ......
T Consensus        58 -------~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~  123 (303)
T 2vwi_A           58 -------DELLKEIQAMSQC-----HHPN--IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI  123 (303)
T ss_dssp             ---------------CCCCC-----CCTT--BCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHH
T ss_pred             -------HHHHHHHHHHhhc-----CCCC--EeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHH
Confidence                   0122333222111     1222  333332  22345689999999999999986421         111222


Q ss_pred             HHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh
Q 008021          434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR  513 (581)
Q Consensus       434 ~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~  513 (581)
                      ..++..++.+ +..||..|++|+|+||.||+++       .+|      .++|+|||++..+.......-..........
T Consensus       124 ~~i~~qi~~~-l~~lH~~~i~H~dl~p~Nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~  189 (303)
T 2vwi_A          124 ATILREVLEG-LEYLHKNGQIHRDVKAGNILLG-------EDG------SVQIADFGVSAFLATGGDITRNKVRKTFVGT  189 (303)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCCCCSGGGEEEC-------TTC------CEEECCCHHHHHCC---------------CC
T ss_pred             HHHHHHHHHH-HHHHHhCCCCCCCCChhhEEEc-------CCC------CEEEEeccchheeccCCCccchhhhcccCCC
Confidence            3344444444 7889999999999999999998       667      8999999998776543221111111112223


Q ss_pred             cHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          514 DGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       514 D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..+.++|.+..........|.++|+..+.+++.+
T Consensus       190 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  223 (303)
T 2vwi_A          190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG  223 (303)
T ss_dssp             CTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ccccCHHHhccccCCCchhhHHHHHHHHHHHHhC
Confidence            3456677765544455567999999999998876

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=4.7e-16  Score=161.54  Aligned_cols=211  Identities=15%  Similarity=0.073  Sum_probs=127.2

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ..|+ .+.||+|++|.||+|+...+       |+.||||+.+........                            +.
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~----------------------------~~   54 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNT-------NQIVAIKKIKLGHRSEAK----------------------------DG   54 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSC-------CSEEEEEEC---------------------------------------
T ss_pred             cccEEEeEEeecCCEEEEEEEECCC-------CcEEEEEEEecCCcchhh----------------------------hh
Confidence            3444 57899999999999999765       799999997654211000                            00


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHI  439 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~  439 (581)
                      ..      -++.+|.+.+.++.     ++++  ++.+.  ......++||||++| ++.+++.....  .......++..
T Consensus        55 ~~------~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~q  120 (346)
T 1ua2_A           55 IN------RTALREIKLLQELS-----HPNI--IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM  120 (346)
T ss_dssp             -C------THHHHHHHHHHHCC-----CTTB--CCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHH
T ss_pred             hh------HHHHHHHHHHhhCC-----CCCC--CeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHH
Confidence            00      12334554444331     2332  23322  234556899999998 78777654221  12222345555


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      ++.+ +..||..|++|+|+||+||+++       .+|      .++|+|||++..+.......     ........+.+.
T Consensus       121 i~~~-l~~lH~~~ivH~Dlkp~Nil~~-------~~~------~~kl~Dfg~a~~~~~~~~~~-----~~~~~t~~y~aP  181 (346)
T 1ua2_A          121 TLQG-LEYLHQHWILHRDLKPNNLLLD-------ENG------VLKLADFGLAKSFGSPNRAY-----THQVVTRWYRAP  181 (346)
T ss_dssp             HHHH-HHHHHHTTCCCCCCCGGGEEEC-------TTC------CEEECCCGGGSTTTSCCCCC-----CCSCCCCTTCCH
T ss_pred             HHHH-HHHHHHCCEECCCCCHHHEEEc-------CCC------CEEEEecccceeccCCcccC-----CcccccccccCc
Confidence            5444 8889999999999999999998       677      89999999998764322110     000112345667


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHH
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSN  563 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~  563 (581)
                      |.+..........|.|+|+..+.+++.+.  +......+.+..+.+
T Consensus       182 E~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~  227 (346)
T 1ua2_A          182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFE  227 (346)
T ss_dssp             HHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             hHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            76654333444569999999999999873  444444445544444

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.60  E-value=2.9e-15  Score=157.37  Aligned_cols=201  Identities=15%  Similarity=0.086  Sum_probs=119.8

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ..|. .+.||+|++|.||+|+...+       |+.||||+........                           ...  
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~---------------------------~~~--   68 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAIL-------ERNVAIKKLSRPFQNQ---------------------------THA--   68 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEEECTTSSH---------------------------HHH--
T ss_pred             hheeEeeeeEecCCEEEEEEEECCC-------CceEEEEEeccccCCh---------------------------HHH--
Confidence            3444 57899999999999998765       7999999976542110                           000  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--------CCCcEEEEeccCCccHHHHHHhhhcchhhHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--------VHPAVLVETYEQGECVSRYVDELQGHERLKSA  435 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--------~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~  435 (581)
                              -.+.+|...+.++     .++++  .+.+.-+        ....++||||++| ++.+++.. .........
T Consensus        69 --------~~~~~E~~~l~~l-----~hpni--v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~  131 (371)
T 2xrw_A           69 --------KRAYRELVLMKCV-----NHKNI--IGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM-ELDHERMSY  131 (371)
T ss_dssp             --------HHHHHHHHHHHHC-----CCTTB--CCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHHS-CCCHHHHHH
T ss_pred             --------HHHHHHHHHHHhc-----CCCCc--cceEEeeccccccccccceEEEEEcCCC-CHHHHHhh-ccCHHHHHH
Confidence                    1123344444332     12222  1222111        1234899999998 56666542 112222233


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      ++..++.+ +..||..|++|+|+||+|||++       .+|      .++|+|||++...+.....      ......-.
T Consensus       132 i~~qi~~a-l~~lH~~~ivH~Dlkp~NIl~~-------~~~------~~kl~Dfg~a~~~~~~~~~------~~~~gt~~  191 (371)
T 2xrw_A          132 LLYQMLCG-IKHLHSAGIIHRDLKPSNIVVK-------SDC------TLKILDFGLARTAGTSFMM------TPYVVTRY  191 (371)
T ss_dssp             HHHHHHHH-HHHHHHTTCCCSCCCGGGEEEC-------TTS------CEEECCCCC----------------------CT
T ss_pred             HHHHHHHH-HHHHHHCCeecccCCHHHEEEc-------CCC------CEEEEEeeccccccccccc------CCceecCC
Confidence            44444444 7889999999999999999998       677      8999999999876543211      11223345


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHH
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLS  559 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~  559 (581)
                      +.++|.+.. .......|.|+++..+.+++.+.  +...+..+.+.
T Consensus       192 y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  236 (371)
T 2xrw_A          192 YRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN  236 (371)
T ss_dssp             TCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             ccCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            677787765 34456789999999999999873  44444333333

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.60  E-value=3.9e-15  Score=156.37  Aligned_cols=200  Identities=18%  Similarity=0.104  Sum_probs=125.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+........                               ...   
T Consensus        47 ~~~lG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~-------------------------------~~~---   85 (371)
T 4exu_A           47 PTHVGSGAYGSVCSAIDKRS-------GEKVAIKKLSRPFQSE-------------------------------IFA---   85 (371)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEECSTTSSH-------------------------------HHH---
T ss_pred             EeEEecCCCeEEEEEEECCC-------CCEEEEEEecccccch-------------------------------hHH---
Confidence            57899999999999999875       7999999976542211                               000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--C------CcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--H------PAVLVETYEQGECVSRYVDELQGHERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t------~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~  440 (581)
                         -.+.+|+..+.++.     +++  +++.+.-+.  .      ..++||||++| +|.+++.. .........++..+
T Consensus        86 ---~~~~~E~~~l~~l~-----h~n--iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~i~~qi  153 (371)
T 4exu_A           86 ---KRAYRELLLLKHMQ-----HEN--VIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGM-EFSEEKIQYLVYQM  153 (371)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTT--BCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHTTS-CCCHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhcC-----CCC--chhhhhheeccCCcccceeEEEEEccccc-cHHHHhhc-CCCHHHHHHHHHHH
Confidence               11234444444331     222  222221111  1      12899999986 67666532 11222223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||+|||++       .+|      .++|+|||++...+.....        ......+.++|
T Consensus       154 ~~a-L~~LH~~~ivH~Dikp~NIll~-------~~~------~~kL~Dfg~a~~~~~~~~~--------~~~t~~y~aPE  211 (371)
T 4exu_A          154 LKG-LKYIHSAGVVHRDLKPGNLAVN-------EDC------ELKILDFGLARHADAEMTG--------YVVTRWYRAPE  211 (371)
T ss_dssp             HHH-HHHHHHTTCCCSCCCGGGEEEC-------TTC------CEEECSTTCC--------C--------TTCCCTTSCHH
T ss_pred             HHH-HHHHHHCCCcCCCcCHHHeEEC-------CCC------CEEEEecCcccccccCcCC--------cccCccccCHH
Confidence            444 8889999999999999999998       677      8999999999866543211        12234567788


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSN  563 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~  563 (581)
                      .+..........|.++++..+.+++.+.  +......+.+..+.+
T Consensus       212 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  256 (371)
T 4exu_A          212 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK  256 (371)
T ss_dssp             HHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             HhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            7765455666789999999999999873  455555555555544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.60  E-value=1.5e-15  Score=161.34  Aligned_cols=205  Identities=17%  Similarity=0.124  Sum_probs=117.5

Q ss_pred             CCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCc-hhhHHHHHHHHHHHHHHhccccccccc
Q 008021          277 GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV-GESIRRDFVIINLAAKISSVIPAVKWL  355 (581)
Q Consensus       277 G~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v-~~~i~~Dl~il~~la~~~~~~p~l~~l  355 (581)
                      ...+++.|+ ++.+.||+|++|.||+|+.+++.     .++.||||+....- ..                         
T Consensus        15 ~~~~~~~y~-~~g~~lG~G~~g~Vy~~~~~~~~-----~~~~vaiK~~~~~~~~~-------------------------   63 (405)
T 3rgf_A           15 RERVEDLFE-YEGCKVGRGTYGHVYKAKRKDGK-----DDKDYALKQIEGTGISM-------------------------   63 (405)
T ss_dssp             CCCHHHHEE-CSSCCCC-----EEEEEEESSSS-----CCCCEEEEECSSSSCCH-------------------------
T ss_pred             hhhhhhhhh-hcCcEeeecCCeEEEEEEEccCC-----CCeEEEEEEECCCCCCH-------------------------
Confidence            456777775 56678999999999999986421     25899999875431 11                         


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcc-cccccc-cCCCCcEEEEeccCCccHHHHHHhhhc-----
Q 008021          356 RLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVY-PLVHPAVLVETYEQGECVSRYVDELQG-----  428 (581)
Q Consensus       356 ~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~-~l~t~~VLVmEyi~G~~L~~~l~~~~~-----  428 (581)
                                       ++.+|...+.++.     ++++. +-..+. +-....+|||||++| ++.+++.....     
T Consensus        64 -----------------~~~~E~~~l~~l~-----hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~  120 (405)
T 3rgf_A           64 -----------------SACREIALLRELK-----HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANK  120 (405)
T ss_dssp             -----------------HHHHHHHHHHHCC-----CTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC---
T ss_pred             -----------------HHHHHHHHHHhcC-----CCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccc
Confidence                             1223444443331     22221 111111 113345899999987 56666542211     


Q ss_pred             -----chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHH
Q 008021          429 -----HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNL  503 (581)
Q Consensus       429 -----~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l  503 (581)
                           .......++..++.+ +..||..|++|+||||+|||+....+   .++      .++|+|||++..+....... 
T Consensus       121 ~~~~l~~~~~~~i~~qi~~a-l~~LH~~~ivH~Dlkp~NIll~~~~~---~~~------~~kl~Dfg~a~~~~~~~~~~-  189 (405)
T 3rgf_A          121 KPVQLPRGMVKSLLYQILDG-IHYLHANWVLHRDLKPANILVMGEGP---ERG------RVKIADMGFARLFNSPLKPL-  189 (405)
T ss_dssp             ----CCHHHHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEECCSST---TTT------CEEECCTTCCC----------
T ss_pred             cccCCCHHHHHHHHHHHHHH-HHHHHhCCEeCCCcCHHHeEEecCCC---CCC------cEEEEECCCceecCCCCccc-
Confidence                 111123344444443 88899999999999999999952111   345      89999999998775432111 


Q ss_pred             HHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          504 VEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       504 ~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .........-.+.+.|.+..........|.|+|+..+.+++.+
T Consensus       190 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g  232 (405)
T 3rgf_A          190 -ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS  232 (405)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHS
T ss_pred             -ccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhC
Confidence             0111122344577888876644455667999999999999987

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.60  E-value=3.4e-14  Score=149.83  Aligned_cols=149  Identities=19%  Similarity=0.222  Sum_probs=98.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+..+....++.||||+.++.....   +                                 
T Consensus        74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------  117 (382)
T 3tt0_A           74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---D---------------------------------  117 (382)
T ss_dssp             EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHH---H---------------------------------
T ss_pred             eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHH---H---------------------------------
Confidence            5789999999999999754211111235789999987653211   0                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----------------c
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----------------H  429 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~  429 (581)
                        .-++.+|.+.+.++.    .++++  ++.+.  ......++||||++|++|.+++.....                 .
T Consensus       118 --~~~~~~E~~~l~~l~----~hpnI--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~  189 (382)
T 3tt0_A          118 --LSDLISEMEMMKMIG----KHKNI--INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS  189 (382)
T ss_dssp             --HHHHHHHHHHHHHHC----CCTTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCC
T ss_pred             --HHHHHHHHHHHHHhc----CCchh--hhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccC
Confidence              012344555555441    23332  22222  223456899999999999999875321                 1


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ......++..++.+ +..||..|++|+|+||+|||++       .++      .++|+|||++..+
T Consensus       190 ~~~~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kL~DFG~a~~~  241 (382)
T 3tt0_A          190 SKDLVSCAYQVARG-MEYLASKKCIHRDLAARNVLVT-------EDN------VMKIADFGLARDI  241 (382)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEC-------TTC------CEEECSCSCCCCS
T ss_pred             HHHHHHHHHHHHHH-HHHHHhCCEecCCCCcceEEEc-------CCC------cEEEcccCccccc
Confidence            12223344444444 8889999999999999999998       667      8999999998754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.60  E-value=3.1e-14  Score=149.95  Aligned_cols=141  Identities=19%  Similarity=0.244  Sum_probs=96.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.++......                                    
T Consensus       119 ~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~------------------------------------  155 (377)
T 3cbl_A          119 GEQIGRGNFGEVFSGRLRAD-------NTLVAVKSCRETLPPDL------------------------------------  155 (377)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEECCTTSCHHH------------------------------------
T ss_pred             eeEeccCCCCeEEEEEEecC-------CeEEEEEEccccCCHHH------------------------------------
Confidence            57899999999999999764       69999999776522100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        .-+|.+|++.+.++     .+++  +++.+.-  .....++||||++|++|.+++.....  .......++..++.+ 
T Consensus       156 --~~~~~~E~~~l~~l-----~hpn--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~-  225 (377)
T 3cbl_A          156 --KAKFLQEARILKQY-----SHPN--IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG-  225 (377)
T ss_dssp             --HTTTTHHHHHHTTC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--EEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-
Confidence              01234555555433     1232  2233322  23456899999999999999865321  111222344444433 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      +..||..|++|+|+||.|||++       .+|      .++|+|||++...
T Consensus       226 l~~LH~~~ivHrDlkp~Nil~~-------~~~------~~kl~DfG~s~~~  263 (377)
T 3cbl_A          226 MEYLESKCCIHRDLAARNCLVT-------EKN------VLKISDFGMSREE  263 (377)
T ss_dssp             HHHHHHTTEECSCCSGGGEEEC-------TTC------CEEECCGGGCEEC
T ss_pred             HHHHHHCCcCCcccCHHHEEEc-------CCC------cEEECcCCCceec
Confidence            8889999999999999999998       667      8999999997643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.60  E-value=1.7e-15  Score=152.92  Aligned_cols=193  Identities=19%  Similarity=0.109  Sum_probs=116.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....   ....|+.||||+.+..-.+.                             .       
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~---~~~~~~~vavK~~~~~~~~~-----------------------------~-------   55 (295)
T 3ugc_A           15 LQQLGKGNFGSVEMCRYDPL---QDNTGEVVAVKKLQHSTEEH-----------------------------L-------   55 (295)
T ss_dssp             EEEEEECSSEEEEEEEECTT---CSSCCEEEEEEEESCCCHHH-----------------------------H-------
T ss_pred             hheeeccCCEEEEEEEEecc---cCCCCcEEEEEEcccCCHHH-----------------------------H-------
Confidence            57899999999999985311   01127999999976542110                             0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~  442 (581)
                         -++.+|++.+.++.     +++  +++.+.-.    ...-++||||++|.+|.+++.....  .......++..++.
T Consensus        56 ---~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~  125 (295)
T 3ugc_A           56 ---RDFEREIEILKSLQ-----HDN--IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK  125 (295)
T ss_dssp             ---HHHHHHHHHHHTCC-----CTT--BCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhCC-----CCC--EeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHH
Confidence               12344555554331     222  22222111    1234799999999999999865322  11122334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..||..|++|+|+||+||+++       .++      .++|+|||++..++........  .......-.+.++|.+
T Consensus       126 ~-l~~lH~~~ivH~Dikp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~  189 (295)
T 3ugc_A          126 G-MEYLGTKRYIHRDLATRNILVE-------NEN------RVKIGDFGLTKVLPQDKEFFKV--KEPGESPIFWYAPESL  189 (295)
T ss_dssp             H-HHHHHHTTCCCSCCSGGGEEEE-------ETT------EEEECCCCSCC---------------CTTCGGGGCCHHHH
T ss_pred             H-HHHHhcCCcccCCCCHhhEEEc-------CCC------eEEEccCcccccccCCcceeee--ccCCCCccceeCcHHh
Confidence            4 8889999999999999999999       667      8999999999877554321110  0000011125666666


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. .......|.++|+..+.+++++
T Consensus       190 ~~-~~~~~~~Di~slG~~l~~l~~g  213 (295)
T 3ugc_A          190 TE-SKFSVASDVWSFGVVLYELFTY  213 (295)
T ss_dssp             HH-CCCCHHHHHHHHHHHHHHHHHT
T ss_pred             cC-CCCChHHHHHHHHHHHHHHHhc
Confidence            44 3344567999999999998875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.60  E-value=1.1e-15  Score=157.02  Aligned_cols=127  Identities=17%  Similarity=0.116  Sum_probs=82.6

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhC---------CeEecCCCCCCEEEeecccccccccc
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD---------NFIHADMHPGNILVRVAQKKSSQKRL  477 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~---------G~~H~DlHPGNILV~~~~~~~~~~g~  477 (581)
                      -++||||++|++|.+++............++..++.+ +..||..         |++|+|+||+|||++       .+| 
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~-L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~-------~~~-  157 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRG-LAYLHTELPRGDHYKPAISHRDLNSRNVLVK-------NDG-  157 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHH-HHHHHCCBCCGGGCBCCEECSSCSGGGEEEC-------TTS-
T ss_pred             EEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHH-HHHHHhhhccccccccceeecccccceEEEc-------CCC-
Confidence            3799999999999999865433323333455555544 8889988         999999999999998       667 


Q ss_pred             cCCCCeEEEEecccccccCHhhHHH---HHHHHHHHHhhcHHHHHHHHHhh------cCCCCCCCHHHHHHHHHHhhhH
Q 008021          478 FRSKPHVIFLDVGMTAELSKTDRVN---LVEFFKAVARRDGRTAAECTLRL------SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       478 ~~~~~~lvLiDFGl~~~L~~~~r~~---l~~l~~Al~~~D~~~~~e~ll~l------~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                           .++|+|||++..+.......   -..........-.+.++|.+...      .......|.|+|+..+.+++.+
T Consensus       158 -----~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g  231 (336)
T 3g2f_A          158 -----TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR  231 (336)
T ss_dssp             -----CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -----cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhc
Confidence                 89999999998765321000   00000001122345566665431      1111245888999988888765

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.60  E-value=1.7e-15  Score=163.79  Aligned_cols=184  Identities=16%  Similarity=0.143  Sum_probs=120.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...        ++.||||+.+++...                                      
T Consensus       193 ~~~lG~G~fg~V~~~~~~~--------~~~vavK~~~~~~~~--------------------------------------  226 (454)
T 1qcf_A          193 EKKLGAGQFGEVWMATYNK--------HTKVAVKTMKPGSMS--------------------------------------  226 (454)
T ss_dssp             EEEEECCSSEEEEEEEETT--------TEEEEEEEECTTSBC--------------------------------------
T ss_pred             EEEcccCCceEEEEEEECC--------ccEEEEEEecCCCcc--------------------------------------
Confidence            5799999999999999864        589999998875211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~  444 (581)
                        .-+|.+|++.+.++.     ++++  .+.+.-. ....++||||++|++|.+++.....   .......++..++.+ 
T Consensus       227 --~~~~~~E~~~l~~l~-----h~~i--v~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~-  296 (454)
T 1qcf_A          227 --VEAFLAEANVMKTLQ-----HDKL--VKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG-  296 (454)
T ss_dssp             --HHHHHHHHHHHTTCC-----CTTB--CCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHhhCC-----CCCE--eeEEEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH-
Confidence              012345665554331     2222  1222111 3456899999999999999864321   111122344444443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||.|||++       .++      .++|+|||++..+.........    .....-.+.++|.+..
T Consensus       297 l~~LH~~~ivHrDlkp~Nill~-------~~~------~~kl~DFG~a~~~~~~~~~~~~----~~~~~~~y~aPE~~~~  359 (454)
T 1qcf_A          297 MAFIEQRNYIHRDLRAANILVS-------ASL------VCKIADFGLARVIEDNEYTARE----GAKFPIKWTAPEAINF  359 (454)
T ss_dssp             HHHHHHTTCCCSSCSGGGEEEC-------TTC------CEEECSTTGGGGBCCHHHHTTC----SSSSCGGGSCHHHHHH
T ss_pred             HHHHHhCCccCCCCCHHHEEEC-------CCC------cEEEeeCCCceEcCCCceeccC----CCcccccccCHHHhcc
Confidence            7889999999999999999998       667      8999999999887654321100    0000013556666543


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       +......|.++|+..+.++++
T Consensus       360 -~~~~~~~DvwslG~~l~el~t  380 (454)
T 1qcf_A          360 -GSFTIKSDVWSFGILLMEIVT  380 (454)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCCCcHHHHHhHHHHHHHHHh
Confidence             444556789999999999887

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.60  E-value=5.8e-16  Score=163.94  Aligned_cols=194  Identities=16%  Similarity=0.135  Sum_probs=117.2

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      .+|+ .+.||+|++|+||+|+.+.+       ++.||||+.+......-..                             
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~~AiK~~~~~~~~~~~~-----------------------------   81 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAE-------EVFYAVKVLQKKAILKKKE-----------------------------   81 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTT-------CCEEEEEEEEGGGBC---------------------------------
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCC-------CCEEEEEEEEHHHhhhhHH-----------------------------
Confidence            3455 68999999999999999875       7999999976542100000                             


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                             +..+..|...      ..+...+-.+++.+..+  ....++||||++|++|.+++..... .......++..+
T Consensus        82 -------~~~~~~e~~~------ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi  148 (373)
T 2r5t_A           82 -------EKHIMSERNV------LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEI  148 (373)
T ss_dssp             ----------------C------CBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHH------HHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHH
Confidence                   0001111111      01111122233333222  2345899999999999998865321 111222344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+||||+|||++       .+|      +++|+|||++..........     ....-.-.+.+.|
T Consensus       149 ~~a-L~~LH~~givHrDlkp~NIll~-------~~g------~ikL~DFG~a~~~~~~~~~~-----~~~~gt~~y~aPE  209 (373)
T 2r5t_A          149 ASA-LGYLHSLNIVYRDLKPENILLD-------SQG------HIVLTDFGLCKENIEHNSTT-----STFCGTPEYLAPE  209 (373)
T ss_dssp             HHH-HHHHHHTTCCCCCCCGGGEEEC-------TTS------CEEECCCCBCGGGBCCCCCC-----CSBSCCCCCCCHH
T ss_pred             HHH-HHHHHHCCceecCCCHHHEEEC-------CCC------CEEEeeCccccccccCCCcc-----ccccCCccccCHH
Confidence            443 8889999999999999999998       777      89999999987532211000     0000112345666


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.. ..+....|.|+++..+.+++.+
T Consensus       210 ~~~~-~~~~~~~DiwslG~il~ell~G  235 (373)
T 2r5t_A          210 VLHK-QPYDRTVDWWCLGAVLYEMLYG  235 (373)
T ss_dssp             HHTT-CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             HhCC-CCCCchhhhHHHHHHHHHHHcC
Confidence            6543 3344567899999999998876

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.60  E-value=2.2e-14  Score=151.05  Aligned_cols=150  Identities=17%  Similarity=0.225  Sum_probs=97.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+......+....+..||||+.+++....                            ..       
T Consensus        86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------------~~-------  130 (370)
T 2psq_A           86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK----------------------------DL-------  130 (370)
T ss_dssp             EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHH----------------------------HH-------
T ss_pred             eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHH----------------------------HH-------
Confidence            5789999999999999753100111236789999987652210                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----------------c
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----------------H  429 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~  429 (581)
                         -++.+|.+.+.++    ..++++  ++.+.  ......++||||++|++|.+++.....                 .
T Consensus       131 ---~~~~~E~~~l~~l----~~hpnI--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  201 (370)
T 2psq_A          131 ---SDLVSEMEMMKMI----GKHKNI--INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT  201 (370)
T ss_dssp             ---HHHHHHHHHHHHS----CCCTTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCC
T ss_pred             ---HHHHHHHHHHHHh----cCCCCE--eeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCC
Confidence               1234455555443    123332  23332  223456899999999999999875321                 0


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      ......++..++.+ +..||..|++|+|+||.|||++       .+|      .++|+|||++..+.
T Consensus       202 ~~~~~~i~~qi~~a-L~~LH~~~ivHrDlkp~NIll~-------~~~------~~kl~DFG~a~~~~  254 (370)
T 2psq_A          202 FKDLVSCTYQLARG-MEYLASQKCIHRDLAARNVLVT-------ENN------VMKIADFGLARDIN  254 (370)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEEC-------TTC------CEEECCCSSCEETT
T ss_pred             HHHHHHHHHHHHHH-HHHHHhCCeeccccchhhEEEC-------CCC------CEEEccccCCcccC
Confidence            11112344444443 8889999999999999999998       677      89999999987654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.60  E-value=3.7e-14  Score=147.41  Aligned_cols=159  Identities=13%  Similarity=0.051  Sum_probs=102.9

Q ss_pred             ceeecccceeEEEEEEeccCCCC-CCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPG-QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G-~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      .+.||+|++|.||+|+...+... ....++.||||+.++.  +.+..++.+++.+                         
T Consensus        47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l-------------------------   99 (352)
T 2jii_A           47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRA-------------------------   99 (352)
T ss_dssp             EEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHH-------------------------
T ss_pred             EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHh-------------------------
Confidence            58999999999999999752100 0002689999998765  3344444444322                         


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC---CCCcEEEEeccCCccHHHHHHhhh---cchhhHHHHHHHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL---VHPAVLVETYEQGECVSRYVDELQ---GHERLKSALAHIGT  441 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l---~t~~VLVmEyi~G~~L~~~l~~~~---~~~~~~~~la~~~i  441 (581)
                               ...|+.++...+...+...+|+.+...   ....++||||+ |.+|.+++....   -.......++..++
T Consensus       100 ---------~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~  169 (352)
T 2jii_A          100 ---------AKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLL  169 (352)
T ss_dssp             ---------CCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHH
T ss_pred             ---------cccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHH
Confidence                     112455555555555566666665432   23458999999 999999987531   11222233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      .+ +..||..|++|+|+||.||+++       .++    ..+++|+|||++..+.
T Consensus       170 ~~-L~~LH~~~ivH~Dikp~NIl~~-------~~~----~~~~kl~Dfg~a~~~~  212 (352)
T 2jii_A          170 DA-LEFLHENEYVHGNVTAENIFVD-------PED----QSQVTLAGYGFAFRYC  212 (352)
T ss_dssp             HH-HHHHHHTTCBCSCCCGGGEEEE-------TTE----EEEEEECCGGGCBCSS
T ss_pred             HH-HHHHHhCCccCCCCCHHHEEEc-------CCC----CceEEEecCcceeecc
Confidence            44 8889999999999999999998       332    1279999999996554

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.60  E-value=2.1e-15  Score=168.65  Aligned_cols=188  Identities=16%  Similarity=0.127  Sum_probs=122.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.......                               .     -
T Consensus       189 ~~~LG~G~fG~Vy~a~~~~t-------g~~vAvK~l~k~~~~-------------------------------~-----~  225 (576)
T 2acx_A          189 YRVLGKGGFGEVCACQVRAT-------GKMYACKKLEKKRIK-------------------------------K-----R  225 (576)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEEHHHHH-------------------------------H-----T
T ss_pred             EEEEeeCCCEEEEEEEECCC-------CCEEEEEEEEhHhhh-------------------------------h-----h
Confidence            47899999999999999875       799999987532000                               0     0


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                      ..+-.+.+|.+.+.++     .+++  +++.+..  .....+|||||++|++|.+++.....   .......++..++.+
T Consensus       226 ~~~~~~~~E~~iL~~l-----~hp~--Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~a  298 (576)
T 2acx_A          226 KGEAMALNEKQILEKV-----NSRF--VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG  298 (576)
T ss_dssp             TCHHHHHHHHHHHHHC-----CCTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHc-----CCCC--EeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence            0112234455555443     1222  2233322  23445899999999999998864321   111222344444443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..||..|++|+|+||+|||++       .+|      .++|+|||++..+.+.....      ...-.-.+.++|.+.
T Consensus       299 -L~yLH~~gIvHrDLKPeNILld-------~~g------~vKL~DFGla~~~~~~~~~~------~~~GT~~Y~APEvl~  358 (576)
T 2acx_A          299 -LEDLHRERIVYRDLKPENILLD-------DHG------HIRISDLGLAVHVPEGQTIK------GRVGTVGYMAPEVVK  358 (576)
T ss_dssp             -HHHHHHTTEECCCCCGGGEEEC-------TTS------CEEECCCTTCEECCTTCCEE------CCCSCGGGCCHHHHT
T ss_pred             -HHHHHHCCEeccCCchheEEEe-------CCC------CeEEEecccceecccCcccc------ccCCCccccCHHHHc
Confidence             8889999999999999999998       677      89999999998775432110      001123456677664


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . ..+....|.|+|+..+.+++.+
T Consensus       359 ~-~~~~~~~DiwSLGvilyeLltG  381 (576)
T 2acx_A          359 N-ERYTFSPDWWALGCLLYEMIAG  381 (576)
T ss_dssp             T-CEESSHHHHHHHHHHHHHHHHS
T ss_pred             C-CCCCccchHHHHHHHHHHHHhC
Confidence            4 3344567999999999999877

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.60  E-value=1.2e-15  Score=162.41  Aligned_cols=194  Identities=17%  Similarity=0.175  Sum_probs=124.1

Q ss_pred             hhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          282 EIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       282 eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      .+++.|+ .+.||+|++|+||+|+.+.+       |+.||+|+.......    |                         
T Consensus        48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~-------~~~~a~K~~~~~~~~----~-------------------------   91 (387)
T 1kob_A           48 SVYDYYDILEELGSGAFGVVHRCVEKAT-------GRVFVAKFINTPYPL----D-------------------------   91 (387)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEECCSHH----H-------------------------
T ss_pred             ccccceEEEEEEecCCCEEEEEEEECCC-------CCEEEEEEecccchh----h-------------------------
Confidence            4455555 67899999999999999865       799999997654210    0                         


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSAL  436 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~l  436 (581)
                                +..+.+|...+.++     .+++  +++.+.  ......++||||++|++|.+++.....  .......+
T Consensus        92 ----------~~~~~~E~~il~~l-----~hpn--Iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i  154 (387)
T 1kob_A           92 ----------KYTVKNEISIMNQL-----HHPK--LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY  154 (387)
T ss_dssp             ----------HHHHHHHHHHHTTC-----CSTT--BCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHhC-----CCcC--CCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHH
Confidence                      11234455444332     1232  223332  223456899999999999998754221  12222334


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +..++.+ +..||..|++|+|+||+|||++..     .++      .++|+|||++..++.......      ......+
T Consensus       155 ~~qi~~a-L~~LH~~givHrDlkp~NIll~~~-----~~~------~vkL~DFG~a~~~~~~~~~~~------~~gt~~y  216 (387)
T 1kob_A          155 MRQACEG-LKHMHEHSIVHLDIKPENIMCETK-----KAS------SVKIIDFGLATKLNPDEIVKV------TTATAEF  216 (387)
T ss_dssp             HHHHHHH-HHHHHHTTEECCCCCGGGEEESST-----TCC------CEEECCCTTCEECCTTSCEEE------ECSSGGG
T ss_pred             HHHHHHH-HHHHHhCCeeecccchHHeEEecC-----CCC------ceEEEecccceecCCCcceee------eccCCCc
Confidence            4444444 888999999999999999999710     224      799999999988765421100      0112345


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.|.+.. .......|.|+++..+.+++.+
T Consensus       217 ~aPE~~~~-~~~~~~~DiwSlG~il~elltg  246 (387)
T 1kob_A          217 AAPEIVDR-EPVGFYTDMWAIGVLGYVLLSG  246 (387)
T ss_dssp             CCHHHHTT-CCBCHHHHHHHHHHHHHHHHHS
T ss_pred             cCchhccC-CCCCCcccEeeHhHHHHHHHhC
Confidence            56666543 3334456899999999998877

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.59  E-value=1.4e-15  Score=163.74  Aligned_cols=192  Identities=17%  Similarity=0.100  Sum_probs=118.2

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|.||+|+.+.+       |+.||||+.++.....                          .+..   
T Consensus       149 ~y~~~~~lG~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~--------------------------~~~~---  192 (446)
T 4ejn_A          149 EFEYLKLLGKGTFGKVILVKEKAT-------GRYYAMKILKKEVIVA--------------------------KDEV---  192 (446)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEEHHHHC----------------------------------
T ss_pred             HcEEeEEEeeCcCEEEEEEEEcCC-------CCEEEEEEEEhhhhhh--------------------------hHHH---
Confidence            344 57999999999999999875       7999999976431000                          0000   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                             ..+.+|.+.+.++     .+++  +++.+..  .....+|||||++|.+|.+++..... .......++..++
T Consensus       193 -------~~~~~e~~~l~~l-----~h~~--iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~  258 (446)
T 4ejn_A          193 -------AHTLTENRVLQNS-----RHPF--LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV  258 (446)
T ss_dssp             ---------------CCCCC-----SCTT--SCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHhC-----CCCe--EeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHH
Confidence                   0112233222111     1222  2233222  22345799999999999988864322 1122233444444


Q ss_pred             HHHHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          442 HALLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       442 ~a~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      .+ +..||. .|++|+|+||+|||++       .+|      .++|+|||++..........     ....-.-.+.++|
T Consensus       259 ~a-L~~LH~~~giiHrDlkp~NIll~-------~~~------~~kl~DFG~a~~~~~~~~~~-----~~~~gt~~y~aPE  319 (446)
T 4ejn_A          259 SA-LDYLHSEKNVVYRDLKLENLMLD-------KDG------HIKITDFGLCKEGIKDGATM-----KTFCGTPEYLAPE  319 (446)
T ss_dssp             HH-HHHHHHHTCCCCCCCCGGGEEEC-------SSS------CEEECCCCCCCTTCC----------CCSSSCGGGCCHH
T ss_pred             HH-HHHHhhcCCEEECCCCHHHEEEC-------CCC------CEEEccCCCceeccCCCccc-----ccccCCccccCHh
Confidence            44 888997 9999999999999998       677      89999999998643322110     0111223566777


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.. ..+....|.++|+..+.+++.+
T Consensus       320 ~~~~-~~~~~~~DiwslG~il~ell~g  345 (446)
T 4ejn_A          320 VLED-NDYGRAVDWWGLGVVMYEMMCG  345 (446)
T ss_dssp             HHHT-SCCCTHHHHHHHHHHHHHHHHS
T ss_pred             hcCC-CCCCCccchhhhHHHHHHHhhC
Confidence            6643 4455677999999999999876

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.59  E-value=1.1e-15  Score=170.89  Aligned_cols=159  Identities=18%  Similarity=0.167  Sum_probs=98.1

Q ss_pred             hhhccCC--ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          282 EIFDGFE--EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       282 eiF~~fd--~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      ..+..|+  ..-..+|+.|+++.++....       |+.||||+...+.....                      +.-.+
T Consensus       230 ~~~~~~~~w~~~~~~~~~~~h~~~rr~~f-------g~~~~~K~~~~~~~~~~----------------------~~~~~  280 (569)
T 4azs_A          230 DFNQPFQHWQNQPYAGAGLAHKRSRRYFF-------GEDYVCKFFYYDMPHGI----------------------LTAEE  280 (569)
T ss_dssp             TEEEECSEEECC-C--------CCEEEEE-------CSSEEEEEEESSCSTTC----------------------SCHHH
T ss_pred             chhhhHHhhhhccccCCcccccccccccc-------cceeEEEEEeccccccc----------------------chhhh
Confidence            3444444  23456777777777766554       69999999875532110                      00000


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHH
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGHERLKSALA  437 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la  437 (581)
                       .+      ..--+|++|+..+.++.      .+..+|+.+...  ...-+|||||++|.+|.+++......  ...++.
T Consensus       281 -~~------~~~~~~~~E~~~l~~~~------~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l--~~~~I~  345 (569)
T 4azs_A          281 -SQ------RNKYELHNEIKFLTQPP------AGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEI--DREKIL  345 (569)
T ss_dssp             -HH------HHHHHHHHHHHHHHSCC------TTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCC--CHHHHH
T ss_pred             -hH------HHHHHHHHHHHHHHhcC------CCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCC--CHHHHH
Confidence             00      01123566776665431      234567765433  45568999999999999999763322  234566


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      ..++.+ +..+|.+|||||||||+|||++       .+|      +++|+|||+++.+..+
T Consensus       346 ~QIl~A-L~ylH~~GIIHRDIKPeNILL~-------~dg------~vKL~DFGlAr~~~~~  392 (569)
T 4azs_A          346 GSLLRS-LAALEKQGFWHDDVRPWNVMVD-------ARQ------HARLIDFGSIVTTPQD  392 (569)
T ss_dssp             HHHHHH-HHHHHHTTCEESCCCGGGEEEC-------TTS------CEEECCCTTEESCC--
T ss_pred             HHHHHH-HHHHHHCCceeccCchHhEEEC-------CCC------CEEEeecccCeeCCCC
Confidence            666655 8999999999999999999998       778      9999999999877653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.59  E-value=7.9e-15  Score=145.14  Aligned_cols=184  Identities=18%  Similarity=0.146  Sum_probs=117.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...        ++.||||+.++.....                                     
T Consensus        13 ~~~lg~G~~g~V~~~~~~~--------~~~vaiK~~~~~~~~~-------------------------------------   47 (267)
T 3t9t_A           13 VQEIGSGQFGLVHLGYWLN--------KDKVAIKTIREGAMSE-------------------------------------   47 (267)
T ss_dssp             EEEEEEETTEEEEEEEETT--------TEEEEEEEECTTTBCH-------------------------------------
T ss_pred             eeEecCCCceeEEEEEecC--------CCeEEEEEccccCCCH-------------------------------------
Confidence            5789999999999999864        5899999987652110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                         -++.+|.+.+.++     .+++  +++.+.  ......++||||++|.+|.+++.....  .......++..++.+ 
T Consensus        48 ---~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~-  116 (267)
T 3t9t_A           48 ---EDFIEEAEVMMKL-----SHPK--LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG-  116 (267)
T ss_dssp             ---HHHHHHHHHHHTC-----CCTT--BCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHH-
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--EeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHH-
Confidence               1233455444433     1233  223322  223456899999999999999865322  112223344444443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..+|..|++|+|+||.||+++       .++      .++|+|||++............    .....-.+.++|.+..
T Consensus       117 l~~lH~~~i~H~dl~p~Nili~-------~~~------~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~  179 (267)
T 3t9t_A          117 MAYLEEACVIHRDLAARNCLVG-------ENQ------VIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSF  179 (267)
T ss_dssp             HHHHHHTTCCCSSCCGGGEEEC-------GGG------CEEECCTTGGGGBCCHHHHSTT----STTCCGGGCCHHHHHH
T ss_pred             HHHHHhCCcccCCCchheEEEC-------CCC------CEEEcccccccccccccccccc----cccccccccChhhhcC
Confidence            8889999999999999999998       677      8999999999876543211100    0000012455555532


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       .......|.++++..+.+++.
T Consensus       180 -~~~~~~~Di~slG~il~~l~~  200 (267)
T 3t9t_A          180 -SRYSSKSDVWSFGVLMWEVFS  200 (267)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCccchhchhhhHHHHHHHhc
Confidence             333345678888888888776

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.59  E-value=2.5e-15  Score=153.56  Aligned_cols=148  Identities=18%  Similarity=0.192  Sum_probs=86.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+  +  .....||||+.+++....                           +.        
T Consensus        28 ~~~lg~G~~g~Vy~~~~~~~--~--~~~~~vavK~~~~~~~~~---------------------------~~--------   68 (323)
T 3qup_A           28 GRMLGKGEFGSVREAQLKQE--D--GSFVKVAVKMLKADIIAS---------------------------SD--------   68 (323)
T ss_dssp             EEEEEEETTEEEEEEEC-----------CEEEEEEC------C---------------------------HH--------
T ss_pred             eceecccCCeEEEEEEEccc--C--CcceeEEEEEecccccCH---------------------------HH--------
Confidence            57999999999999998763  1  001389999976542110                           00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCc------EEEEeccCCccHHHHHHhhhc-------chhhH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPA------VLVETYEQGECVSRYVDELQG-------HERLK  433 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~------VLVmEyi~G~~L~~~l~~~~~-------~~~~~  433 (581)
                        .-++.+|++.+.++     .+++  +++.+.-.  ....      ++||||++|.+|.+++.....       .....
T Consensus        69 --~~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  139 (323)
T 3qup_A           69 --IEEFLREAACMKEF-----DHPH--VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL  139 (323)
T ss_dssp             --HHHHHHHHHHHTTC-----CCTT--BCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHH
T ss_pred             --HHHHHHHHHHHHHC-----CCCc--eehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHH
Confidence              01234455544433     1222  22222211  1112      799999999999999864321       11122


Q ss_pred             HHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       434 ~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      ..++..++.+ +..||..|++|+|+||+||+++       .+|      .++|+|||++..+...
T Consensus       140 ~~i~~qi~~a-l~~LH~~~ivH~Dikp~NIli~-------~~~------~~kl~Dfg~a~~~~~~  190 (323)
T 3qup_A          140 VRFMVDIACG-MEYLSSRNFIHRDLAARNCMLA-------EDM------TVCVADFGLSRKIYSG  190 (323)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEC-------TTS------CEEECCCCC-------
T ss_pred             HHHHHHHHHH-HHHHHcCCcccCCCCcceEEEc-------CCC------CEEEeecccccccccc
Confidence            3344444444 8889999999999999999998       667      8999999999876543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.59  E-value=3.8e-16  Score=170.85  Aligned_cols=189  Identities=16%  Similarity=0.133  Sum_probs=122.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+.++....    +                   .   +.        
T Consensus        21 ~~~LG~G~fg~V~~a~~~~~-------g~~vAvK~i~~~~~~----~-------------------~---~~--------   59 (476)
T 2y94_A           21 GDTLGVGTFGKVKVGKHELT-------GHKVAVKILNRQKIR----S-------------------L---DV--------   59 (476)
T ss_dssp             EEEEECCSSSCEEEEEETTT-------CCEEEEEEEEHHHHH----H-------------------T---TT--------
T ss_pred             EEEEeeCCCeEEEEEEECCC-------CCEEEEEEEEhhhcc----C-------------------H---HH--------
Confidence            68999999999999999865       799999997542100    0                   0   00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|.+.+..+     .+++  +++.+.-  .....+|||||++|++|.+++..... .......++..++.+ +
T Consensus        60 --~~~~~~Ei~~l~~l-----~Hpn--Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~a-L  129 (476)
T 2y94_A           60 --VGKIRREIQNLKLF-----RHPH--IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSG-V  129 (476)
T ss_dssp             --HHHHHHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--CCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence              01234455444322     1222  2333322  23455899999999999998754211 122223344444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+||+++       .+|      .++|+|||++..+++.....      .......+.++|.+...
T Consensus       130 ~~LH~~givHrDLkp~NIll~-------~~~------~vkL~DFG~a~~~~~~~~~~------~~~gt~~y~aPE~~~~~  190 (476)
T 2y94_A          130 DYCHRHMVVHRDLKPENVLLD-------AHM------NAKIADFGLSNMMSDGEFLR------TSCGSPNYAAPEVISGR  190 (476)
T ss_dssp             HHHHTTTEECSCCSGGGEEEC-------TTC------CEEECCCSSCEECCTTCCBC------CCCSCSTTCCHHHHTTC
T ss_pred             HHHHHCCCCcccccHHHEEEe-------cCC------CeEEEeccchhhcccccccc------ccCCCcCeEChhhccCC
Confidence            889999999999999999998       667      89999999998775532100      00112345667766543


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+++..+.+++.+
T Consensus       191 ~~~~~~~DiwSlGvil~elltG  212 (476)
T 2y94_A          191 LYAGPEVDIWSSGVILYALLCG  212 (476)
T ss_dssp             CBCSHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcceehhhHHHHHHHhhC
Confidence            3333457899999999998877

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.59  E-value=1.1e-15  Score=173.94  Aligned_cols=194  Identities=16%  Similarity=0.061  Sum_probs=121.1

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      .+|+ .+.||+|++|+||+|+.+.+       |+.||||+.+.....   .                   .-..      
T Consensus       341 ~~f~~~~~LG~G~fG~V~~~~~~~~-------~~~vAvK~l~~~~~~---~-------------------~~~~------  385 (674)
T 3pfq_A          341 TDFNFLMVLGKGSFGKVMLSERKGT-------DELYAVKILKKDVVI---Q-------------------DDDV------  385 (674)
T ss_dssp             TTEEEEEESSBTTTBCEEEEEESSS-------CCEEEEEEEEHHHHH---H-------------------TTTT------
T ss_pred             cceEEEEEEccCCCEEEEEEEECCC-------CcEEEEEEEeccccc---c-------------------HHHH------
Confidence            3455 57899999999999999875       799999997642100   0                   0000      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                              -.+..|.+.+..    ....+.+  +..+..+  ...-+|||||++|++|.+++..... .......++..+
T Consensus       386 --------~~~~~E~~~l~~----~~~~~~i--~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi  451 (674)
T 3pfq_A          386 --------ECTMVEKRVLAL----PGKPPFL--TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI  451 (674)
T ss_dssp             --------HHHHHHHHHHTC----TTCCTTB--CCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHh----ccCCCeE--EEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHH
Confidence                    011223322221    1122322  2222222  2345799999999999998865322 112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++||||||+|||++       .+|      .++|+|||++..........     ....-.-.+.++|
T Consensus       452 ~~a-L~~LH~~gIiHrDLKp~NILl~-------~~g------~ikL~DFGla~~~~~~~~~~-----~~~~GT~~Y~APE  512 (674)
T 3pfq_A          452 AIG-LFFLQSKGIIYRDLKLDNVMLD-------SEG------HIKIADFGMCKENIWDGVTT-----KTFCGTPDYIAPE  512 (674)
T ss_dssp             HHH-HHHHHHTSEECCCCCSTTEEEC-------SSS------CEEECCCTTCEECCCTTCCB-----CCCCSCSSSCCHH
T ss_pred             HHH-HHHHHhCCeEeccCChhhEEEc-------CCC------cEEEeecceeeccccCCccc-----ccccCCCcccCHh
Confidence            444 8889999999999999999998       777      89999999988642211100     0001122456667


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.. ..+....|.|+|+..+.+++.+
T Consensus       513 ~l~~-~~~~~~~DvwSlGvilyelltG  538 (674)
T 3pfq_A          513 IIAY-QPYGKSVDWWAFGVLLYEMLAG  538 (674)
T ss_dssp             HHTC-CCBSTHHHHHHHHHHHHHHHHS
T ss_pred             hhcC-CCCCccceEechHHHHHHHHcC
Confidence            6533 4455677999999999999877

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.59  E-value=1.3e-15  Score=151.84  Aligned_cols=189  Identities=17%  Similarity=0.126  Sum_probs=114.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.++.....                       .   +.        
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~-----------------------~---~~--------   54 (276)
T 2h6d_A           16 GDTLGVGTFGKVKIGEHQLT-------GHKVAVKILNRQKIRS-----------------------L---DV--------   54 (276)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEEHHHHHH-----------------------T---TC--------
T ss_pred             EeeecCCCCeEEEEEEECCC-------CceEEEEEeccccccc-----------------------h---hH--------
Confidence            57899999999999999764       6999999875431000                       0   00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|+..+.++.     +++  +++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        55 --~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~-l  124 (276)
T 2h6d_A           55 --VGKIKREIQNLKLFR-----HPH--IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA-V  124 (276)
T ss_dssp             --HHHHHHHHHHHHTCC-----CTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHhcCC-----CCC--EeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHH-H
Confidence              012344555444321     222  333332  223456899999999999999865322 122223444444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||.||+++       .++      .++|+|||++..+.......      .......+.++|.+...
T Consensus       125 ~~lH~~~i~H~dl~p~Nil~~-------~~~------~~~l~dfg~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~  185 (276)
T 2h6d_A          125 DYCHRHMVVHRDLKPENVLLD-------AHM------NAKIADFGLSNMMSDGEFLR------TSCGSPNYAAPEVISGR  185 (276)
T ss_dssp             HHHHHHCSSCCCCCGGGEEEC-------TTS------CEEECCCCGGGCCCC-------------------CCTGGGTTS
T ss_pred             HHHHHCCCccCCCChhhEEEC-------CCC------CEEEeecccccccCCCccee------cccCCccccCHHHHcCC
Confidence            889999999999999999998       667      89999999998776543211      00111223333433221


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       186 ~~~~~~~Di~slG~~l~~l~~g  207 (276)
T 2h6d_A          186 LYAGPEVDIWSCGVILYALLCG  207 (276)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCccchHHHHHHHHHHHHhC
Confidence            1112345777777777777765

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.59  E-value=6.9e-14  Score=138.86  Aligned_cols=139  Identities=21%  Similarity=0.215  Sum_probs=96.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.        +..||||+.+++-..                                      
T Consensus        13 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~--------------------------------------   46 (268)
T 3sxs_A           13 LKELGSGQFGVVKLGKWKG--------QYDVAVKMIKEGSMS--------------------------------------   46 (268)
T ss_dssp             EEEEEEETTEEEEEEEETT--------TEEEEEEEECBTTBC--------------------------------------
T ss_pred             eeeeccCCCceEEEEEecC--------ceeEEEEEeccCCCc--------------------------------------
Confidence            5789999999999998864        588999998764211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        +-++.+|++.+.++.     +++  +++.+.  ......++||||++|.+|.+++.....  .......++..++.+ 
T Consensus        47 --~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~-  116 (268)
T 3sxs_A           47 --EDEFFQEAQTMMKLS-----HPK--LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG-  116 (268)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTT--BCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhCC-----CCC--EeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHH-
Confidence              012344555554432     232  233332  223445899999999999999865322  122223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      +..||..|++|+|+||+||+++       .++      .++|+|||++....
T Consensus       117 l~~lH~~~i~H~dikp~Nil~~-------~~~------~~~l~Dfg~~~~~~  155 (268)
T 3sxs_A          117 MAFLESHQFIHRDLAARNCLVD-------RDL------CVKVSDFGMTRYVL  155 (268)
T ss_dssp             HHHHHHTTEEESSCSGGGEEEC-------TTC------CEEECCTTCEEECC
T ss_pred             HHHHHHCCeecCCcCcceEEEC-------CCC------CEEEccCccceecc
Confidence            8889999999999999999998       667      89999999987543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.59  E-value=4.1e-15  Score=151.85  Aligned_cols=180  Identities=18%  Similarity=0.163  Sum_probs=112.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+..         ++.||||+......                                       
T Consensus        13 ~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~---------------------------------------   44 (307)
T 2eva_A           13 EEVVGRGAFGVVCKAKWR---------AKDVAIKQIESESE---------------------------------------   44 (307)
T ss_dssp             EEEEECCSSSEEEEEEET---------TEEEEEEECSSTTH---------------------------------------
T ss_pred             eeEeecCCCceEEEEEEC---------CeeEEEEEecChhH---------------------------------------
Confidence            578999999999999874         58999998654310                                       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc----hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH----ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~----~~~~~~la~~~i~a~  444 (581)
                        .-+|.+|.+.+.++.     +++  +.+.+.......++||||++|.+|.+++......    ......++..++++ 
T Consensus        45 --~~~~~~E~~~l~~l~-----hp~--iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~-  114 (307)
T 2eva_A           45 --RKAFIVELRQLSRVN-----HPN--IVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQG-  114 (307)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTT--BCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHhcCC-----CCC--cCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHH-
Confidence              012344555554431     232  3344444445678999999999999998643211    11112233333333 


Q ss_pred             HHHhhh---CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          445 LKMLLV---DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       445 l~~L~~---~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      +..||.   .|++|+|+||.||+++       .+|     ..++|+|||++..+.......        .....+.+.|.
T Consensus       115 l~~LH~~~~~~ivH~dlkp~NIll~-------~~~-----~~~kl~Dfg~~~~~~~~~~~~--------~gt~~y~aPE~  174 (307)
T 2eva_A          115 VAYLHSMQPKALIHRDLKPPNLLLV-------AGG-----TVLKICDFGTACDIQTHMTNN--------KGSAAWMAPEV  174 (307)
T ss_dssp             HHHHHTCSSSCCCCCCCSGGGEEEE-------TTT-----TEEEECCCCC--------------------CCTTSSCHHH
T ss_pred             HHHHHhCCCCCeecCCCChhHEEEe-------CCC-----CEEEEcccccccccccccccC--------CCCCceEChhh
Confidence            777888   8999999999999998       444     148999999987665432111        12234556665


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. .......|.++|+..+.+++.+
T Consensus       175 ~~~-~~~~~~~Di~slG~il~el~~g  199 (307)
T 2eva_A          175 FEG-SNYSEKCDVFSWGIILWEVITR  199 (307)
T ss_dssp             HTC-CCCCTHHHHHHHHHHHHHHHHT
T ss_pred             hCC-CCCCcHHHHHHHHHHHHHHHHC
Confidence            532 3344566888998888888876

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.59  E-value=1.3e-15  Score=152.58  Aligned_cols=187  Identities=16%  Similarity=0.041  Sum_probs=103.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.++......                                    
T Consensus        12 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~------------------------------------   48 (290)
T 3fme_A           12 IMELGRGAYGVVEKMRHVPS-------GQIMAVKRIRATVNSQE------------------------------------   48 (290)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEEC---CHHH------------------------------------
T ss_pred             HHhcCCCCCeEEEEEEecCC-------CeEEEEEEeecccCcHH------------------------------------
Confidence            57899999999999999765       79999999765422110                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhh-----cchhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQ-----GHERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~-----~~~~~~~~la~~~i  441 (581)
                        +.++..|...+   ... ..+++  +++.+.  ......++||||++| ++.+++....     -.......++..++
T Consensus        49 --~~~~~~~~~~~---~~~-~~h~~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~  119 (290)
T 3fme_A           49 --QKRLLMDLDIS---MRT-VDCPF--TVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIV  119 (290)
T ss_dssp             --HHHHHHHHHHH---HTT-CCCTT--BCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHH---HHh-CCCCe--EEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence              00111111111   011 12222  223332  223456899999997 7777664311     11122233444444


Q ss_pred             HHHHHHhhhC-CeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          442 HALLKMLLVD-NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       442 ~a~l~~L~~~-G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      .+ +..||.. |++|+|+||.||+++       .++      +++|+|||++..+.........      ...-.+.++|
T Consensus       120 ~~-l~~lH~~~~i~H~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~------~~t~~y~aPE  179 (290)
T 3fme_A          120 KA-LEHLHSKLSVIHRDVKPSNVLIN-------ALG------QVKMCDFGISGYLVDDVAKDID------AGCKPYMAPE  179 (290)
T ss_dssp             HH-HHHHHHHSCCCCCCCSGGGCEEC-------TTC------CEEBCCC---------------------CCCCCCSCHH
T ss_pred             HH-HHHHhhcCCeecCCCCHHHEEEC-------CCC------CEEEeecCCccccccccccccc------CCCccccChh
Confidence            44 8889998 999999999999998       666      8999999999876554332211      1222345566


Q ss_pred             HH---HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CT---LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~l---l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+   ..-.......|.++++..+.+++.+
T Consensus       180 ~~~~~~~~~~~~~~~Di~slG~il~~l~~g  209 (290)
T 3fme_A          180 RINPELNQKGYSVKSDIWSLGITMIELAIL  209 (290)
T ss_dssp             HHSCCTTC--CCHHHHHHHHHHHHHHHHHT
T ss_pred             hcChhhcCcCCCcHHHHHHHHHHHHHHHHC
Confidence            55   2222233355888888888888766

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.59  E-value=1.5e-15  Score=160.10  Aligned_cols=238  Identities=13%  Similarity=0.034  Sum_probs=129.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+...+.. ...+++.+++.+... +...-..........       
T Consensus        12 ~~~lG~G~fg~V~~a~~~~~-------~~~vAiK~~~~~~~-~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~-------   75 (383)
T 3eb0_A           12 GKTLGTGSFGIVCEVFDIES-------GKRFALKKVLQDPR-YKNRELDIMKVLDHV-NIIKLVDYFYTTGDE-------   75 (383)
T ss_dssp             EEEEECC-CEEEEEEEETTT-------CCEEEEEEEECCTT-SCCHHHHHHTTCCCT-TBCCEEEEEEEC----------
T ss_pred             EEEEEeccCEEEEEEEECCC-------CCEEEEEEEecCcc-hHHHHHHHHHHcCCC-CccchhheeeecCcc-------
Confidence            57999999999999999775       79999999876633 334566666543110 001101111000000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhh-----cchhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQ-----GHERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~-----~~~~~~~~la~~~i~  442 (581)
                        +............+............+..... -....++||||++| +|.+.+....     -.......++..++.
T Consensus        76 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~  152 (383)
T 3eb0_A           76 --EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFR  152 (383)
T ss_dssp             ------------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             --cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence              00000000000000000000000011111111 11224699999997 6666654311     111122334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..||..|++|+|+||+||+++   .   .++      .++|+|||++..+.+.....      .......+.+.|.+
T Consensus       153 a-L~~LH~~gi~H~Dikp~Nil~~---~---~~~------~~kl~Dfg~a~~~~~~~~~~------~~~~t~~y~aPE~~  213 (383)
T 3eb0_A          153 A-VGFIHSLGICHRDIKPQNLLVN---S---KDN------TLKLCDFGSAKKLIPSEPSV------AYICSRFYRAPELM  213 (383)
T ss_dssp             H-HHHHHTTTEECSCCCGGGEEEE---T---TTT------EEEECCCTTCEECCTTSCCC------CCCCCSSCCCHHHH
T ss_pred             H-HHHHHHCcCccCccCHHHEEEc---C---CCC------cEEEEECCCCcccCCCCCCc------CcccCCCccCHHHh
Confidence            4 7889999999999999999997   1   355      89999999998765432111      00123346778887


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      ..........|.|+++..+.+++.+.  +......+.+..+.+.
T Consensus       214 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  257 (383)
T 3eb0_A          214 LGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI  257 (383)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             cCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            65555666789999999999999873  4555555666665554

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.59  E-value=1.3e-15  Score=154.20  Aligned_cols=195  Identities=18%  Similarity=0.148  Sum_probs=122.0

Q ss_pred             ChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       279 ~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      ..++.|..  .+.||+|++|+||+|+...+       |+.||||+.++.....                           
T Consensus        19 ~~~~~y~~--~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~---------------------------   62 (303)
T 3a7i_A           19 DPEELFTK--LEKIGKGSFGEVFKGIDNRT-------QKVVAIKIIDLEEAED---------------------------   62 (303)
T ss_dssp             CGGGTEEE--EEEEEECSSSEEEEEEETTT-------CCEEEEEEEETTTCST---------------------------
T ss_pred             ChHHHHHH--hhhhcccCCeEEEEEEECCC-------CcEEEEEEecccccHH---------------------------
Confidence            44555542  47899999999999998764       6999999987542110                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHH
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGHERLKSAL  436 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~l  436 (581)
                       ..          -++.+|...+.++     .+++  +++.+..  .....++||||++|.+|.+++............+
T Consensus        63 -~~----------~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  124 (303)
T 3a7i_A           63 -EI----------EDIQQEITVLSQC-----DSPY--VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI  124 (303)
T ss_dssp             -TH----------HHHHHHHHHHHHC-----CCTT--BCCEEEEEEETTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHH
T ss_pred             -HH----------HHHHHHHHHHHhC-----CCCC--EeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHH
Confidence             00          1233444444332     1222  2333322  2344589999999999999886432222223344


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +..++.+ +..||..|++|+|+||.||+++       .+|      +++|+|||++..+.+.....     ........+
T Consensus       125 ~~qi~~~-l~~lH~~~i~H~dl~p~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~y  185 (303)
T 3a7i_A          125 LREILKG-LDYLHSEKKIHRDIKAANVLLS-------EHG------EVKLADFGVAGQLTDTQIKR-----NTFVGTPFW  185 (303)
T ss_dssp             HHHHHHH-HHHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECBTTBCCB-----CCCCSCGGG
T ss_pred             HHHHHHH-HHHHHHCCCccCCCChheEEEC-------CCC------CEEEeecccceecCcccccc-----CccCCCcCc
Confidence            4444444 7889999999999999999998       667      89999999997765432100     000011224


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++|.+.. .......|.++|+..+.+++.+
T Consensus       186 ~aPE~~~~-~~~~~~~Di~slG~il~~l~~g  215 (303)
T 3a7i_A          186 MAPEVIKQ-SAYDSKADIWSLGITAIELARG  215 (303)
T ss_dssp             CCHHHHTT-CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             cCHHHHhc-CCCCchhhhHHHHHHHHHHccC
Confidence            45555432 3333456788888888887766

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.59  E-value=2.5e-15  Score=153.90  Aligned_cols=127  Identities=13%  Similarity=0.140  Sum_probs=83.0

Q ss_pred             CcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhhC--------CeEecCCCCCCEEEeecccccccccc
Q 008021          406 PAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD--------NFIHADMHPGNILVRVAQKKSSQKRL  477 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~~--------G~~H~DlHPGNILV~~~~~~~~~~g~  477 (581)
                      ..++||||++|.+|.+++............++..++.+ +..+|..        |++|+|+||.|||++       .++ 
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~-l~~lH~~~~~~~~~~~ivH~Dikp~Nill~-------~~~-  179 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSG-LCHLHTEIFSTQGKPAIAHRDLKSKNILVK-------KNG-  179 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHH-HHHHHSCBCSTTCBCCEECSCCCGGGEEEC-------TTS-
T ss_pred             ceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHH-HHHHHHhhhhhccCCCEEecccchHHEEEC-------CCC-
Confidence            45799999999999999865332222233444444444 7889988        999999999999998       667 


Q ss_pred             cCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCC-----CCCHHHHHHHHHHhhhH
Q 008021          478 FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQN-----CPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       478 ~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~-----~~D~~~f~~~l~~l~~~  547 (581)
                           .++|+|||++..+.......-... ......-.+.++|.+........     ..|.|+|+..+.+++++
T Consensus       180 -----~~kl~Dfg~a~~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          180 -----TCCIADLGLAVKFISDTNEVDIPP-NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             -----CEEECCCTTCEECC---------C-CSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -----CEEEEeCCCceeeccccccccCCC-CCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence                 899999999987765432211000 00011224567776654322221     15999999999999876

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.59  E-value=1.3e-15  Score=156.89  Aligned_cols=194  Identities=13%  Similarity=0.153  Sum_probs=114.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+....-..                                      
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~--------------------------------------   48 (330)
T 2izr_A           14 GKKIGCGNFGELRLGKNLYT-------NEYVAIKLEPMKSRA--------------------------------------   48 (330)
T ss_dssp             EEECCC-CTTSEEEEEETTT-------TEEEEEEEEETTCSS--------------------------------------
T ss_pred             EEEeeccCCceEEEEEECCC-------CcEEEEEEeccccch--------------------------------------
Confidence            57899999999999998764       799999987543110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                         -++.+|.+.+.++.    .+++  +++.+.  ......++||||+ |.+|.+++.....  .......++..++.+ 
T Consensus        49 ---~~~~~E~~~l~~l~----~h~~--i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~-  117 (330)
T 2izr_A           49 ---PQLHLEYRFYKQLG----SGDG--IPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISR-  117 (330)
T ss_dssp             ---CCHHHHHHHHHHHC----SCTT--SCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHH-
T ss_pred             ---HHHHHHHHHHHHhh----CCCC--CCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHH-
Confidence               01233444444431    2232  233332  2233458999999 9999999875311  222223445454444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH--HHHHHHhhcHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE--FFKAVARRDGRTAAECT  522 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~--l~~Al~~~D~~~~~e~l  522 (581)
                      +..||..|++|+|+||.|||++       .++. .....++|+|||++..+..........  -.........+.+.|.+
T Consensus       118 l~~LH~~~iiHrDlkp~Nill~-------~~~~-~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  189 (330)
T 2izr_A          118 MEYVHSKNLIYRDVKPENFLIG-------RPGN-KTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTH  189 (330)
T ss_dssp             HHHHHHTTEECCCCCGGGEEEC-------CGGG-TCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred             HHHHHhCCeeccCCCHHHeeec-------cCCC-CCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHH
Confidence            8889999999999999999998       4430 011239999999998654322100000  00000011233445554


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. .......|.++|+..+.+++.+
T Consensus       190 ~~-~~~~~~~Di~slG~il~ell~g  213 (330)
T 2izr_A          190 LG-KEQSRRDDLEALGHMFMYFLRG  213 (330)
T ss_dssp             TT-CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cC-CCCCchhHHHHHHHHHHHHhcC
Confidence            33 2233355777887777777765

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.59  E-value=1.2e-15  Score=158.79  Aligned_cols=186  Identities=15%  Similarity=0.132  Sum_probs=120.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.+.+......                                   
T Consensus        38 ~~~lg~G~~g~V~~~~~~~~-------~~~va~K~~~~~~~~~~~-----------------------------------   75 (360)
T 3eqc_A           38 ISELGAGNGGVVFKVSHKPS-------GLVMARKLIHLEIKPAIR-----------------------------------   75 (360)
T ss_dssp             EEEEEECSSCEEEEEEETTT-------CCEEEEEEEECCCCHHHH-----------------------------------
T ss_pred             eeeecCCCCeEEEEEEECCC-------CcEEEEEEeccccCHHHH-----------------------------------
Confidence            57899999999999999865       799999998775321110                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|++.+.++     .+++  +++.+..  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        76 ---~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~-l  144 (360)
T 3eqc_A           76 ---NQIIRELQVLHEC-----NSPY--IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG-L  144 (360)
T ss_dssp             ---HHHHHHHGGGGGC-----CCTT--BCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHHC-----CCCC--EEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence               1123344333222     1222  3333322  23445899999999999999865322 122223344444443 7


Q ss_pred             HHhhhC-CeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLVD-NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~~-G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..||.. |++|+|+||+||+++       .+|      .++|+|||++..+.......       ......+.+.|.+..
T Consensus       145 ~~lh~~~~i~H~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-------~~gt~~y~aPE~~~~  204 (360)
T 3eqc_A          145 TYLREKHKIMHRDVKPSNILVN-------SRG------EIKLCDFGVSGQLIDSMANS-------FVGTRSYMSPERLQG  204 (360)
T ss_dssp             HHHHHHHCCCCSCCSGGGEEEC-------TTC------CEEECCCCCCHHHHHHC-----------CCCCTTCCHHHHTT
T ss_pred             HHHHHhCCEEcCCccHHHEEEC-------CCC------CEEEEECCCCcccccccccC-------CCCCCCeECHHHHcC
Confidence            778874 999999999999998       667      89999999987664432222       122334566666543


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                       .......|.++|+..+.+++.+.
T Consensus       205 -~~~~~~~Di~slG~il~~l~~g~  227 (360)
T 3eqc_A          205 -THYSVQSDIWSMGLSLVEMAVGR  227 (360)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHTS
T ss_pred             -CCCCchhhHHHHHHHHHHHHhCC
Confidence             23334568999999999998773

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.59  E-value=3.9e-15  Score=150.09  Aligned_cols=188  Identities=16%  Similarity=0.139  Sum_probs=116.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.......                        ...           
T Consensus        27 ~~~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~------------------------~~~-----------   64 (285)
T 3is5_A           27 KRKLGSGAFGDVHLVEERSS-------GLERVIKTINKDRSQ------------------------VPM-----------   64 (285)
T ss_dssp             EEEEEECSSCEEEEEEETTT-------CCEEEEEEEEGGGCC------------------------SCH-----------
T ss_pred             cceeccCCCeEEEEEEEccC-------CceEEEEEeeccccc------------------------hhH-----------
Confidence            68999999999999999764       799999987654110                        000           


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhh-----cchhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQ-----GHERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~-----~~~~~~~~la~~~i  441 (581)
                         -.+.+|.+.+.++     .+++  +++.+.-  .....++||||++|.+|.+++....     ........++..++
T Consensus        65 ---~~~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~  134 (285)
T 3is5_A           65 ---EQIEAEIEVLKSL-----DHPN--IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM  134 (285)
T ss_dssp             ---HHHHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhC-----CCch--HHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHH
Confidence               1123454444433     1232  2333322  2344589999999999998875421     11122234444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+|+||+||++....    .++      .++|+|||++..+.......      .......+.++|.
T Consensus       135 ~~-L~~LH~~~ivH~dikp~NIl~~~~~----~~~------~~kl~Dfg~a~~~~~~~~~~------~~~~t~~y~aPE~  197 (285)
T 3is5_A          135 NA-LAYFHSQHVVHKDLKPENILFQDTS----PHS------PIKIIDFGLAELFKSDEHST------NAAGTALYMAPEV  197 (285)
T ss_dssp             HH-HHHHHHTTCCCCCCSGGGEEESSSS----TTC------CEEECCCCCCCC----------------CTTGGGCCHHH
T ss_pred             HH-HHHHHhCCEEECCCCHHHEEEecCC----CCC------CEEEEeeecceecCCcccCc------CcccccCcCChHH
Confidence            44 8889999999999999999996110    334      89999999998765433211      1122334566665


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.  +......|.++++..+.+++.+
T Consensus       198 ~~--~~~~~~~Di~slG~il~~ll~g  221 (285)
T 3is5_A          198 FK--RDVTFKCDIWSAGVVMYFLLTG  221 (285)
T ss_dssp             HT--TCCCHHHHHHHHHHHHHHHHHS
T ss_pred             hc--cCCCcccCeehHHHHHHHHHhC
Confidence            42  3334456899999999998876

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.58  E-value=5e-15  Score=154.77  Aligned_cols=195  Identities=21%  Similarity=0.169  Sum_probs=124.2

Q ss_pred             CCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccC
Q 008021          277 GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLR  356 (581)
Q Consensus       277 G~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~  356 (581)
                      ...+.+.|..  .+.||+|++|+||+|+...+       |+.||||+........                         
T Consensus        49 ~~~~~~~y~~--~~~lG~G~~g~Vy~a~~~~~-------~~~vaiK~~~~~~~~~-------------------------   94 (348)
T 1u5q_A           49 KDDPEKLFSD--LREIGHGSFGAVYFARDVRN-------SEVVAIKKMSYSGKQS-------------------------   94 (348)
T ss_dssp             CSCHHHHEEE--EEEEEECSSEEEEEEEETTT-------TEEEEEEEEESCSSCH-------------------------
T ss_pred             ccchhhheee--eeEEccCCCEEEEEEEEccC-------CeEEEEEEEccccccc-------------------------
Confidence            3445555542  46799999999999998764       7999999976542110                         


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhh
Q 008021          357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERL  432 (581)
Q Consensus       357 l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~  432 (581)
                       .+..          -++.+|.+.+.++.     ++++.  +.+.  ......+|||||++| ++.+++.....  ....
T Consensus        95 -~~~~----------~~~~~E~~~l~~l~-----hpniv--~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~  155 (348)
T 1u5q_A           95 -NEKW----------QDIIKEVRFLQKLR-----HPNTI--QYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVE  155 (348)
T ss_dssp             -HHHH----------HHHHHHHHHHHHCC-----CTTBC--CEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHH
T ss_pred             -hHHH----------HHHHHHHHHHHhCC-----CCCEe--eEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHH
Confidence             0000          12344555554431     23322  2222  223455799999997 56666543221  1122


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh
Q 008021          433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR  512 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~  512 (581)
                      ...++..++.+ +..||..|++|+|+||.|||++       .+|      .++|+|||++..+++...         ...
T Consensus       156 ~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kL~DfG~a~~~~~~~~---------~~g  212 (348)
T 1u5q_A          156 IAAVTHGALQG-LAYLHSHNMIHRDVKAGNILLS-------EPG------LVKLGDFGSASIMAPANS---------FVG  212 (348)
T ss_dssp             HHHHHHHHHHH-HHHHHHTTCBCCCCSGGGEEEE-------TTT------EEEECCCTTCBSSSSBCC---------CCS
T ss_pred             HHHHHHHHHHH-HHHHHhCCeeeCCCCHHHEEEC-------CCC------CEEEeeccCceecCCCCc---------ccC
Confidence            23344444443 8889999999999999999999       677      999999999987654321         112


Q ss_pred             hcHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHhhhH
Q 008021          513 RDGRTAAECTLRL--SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       513 ~D~~~~~e~ll~l--~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ...+.++|.+...  +......|.++|+..+.+++++
T Consensus       213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g  249 (348)
T 1u5q_A          213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  249 (348)
T ss_dssp             CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhC
Confidence            3346677777542  3344567999999999998876

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.58  E-value=3.8e-15  Score=160.97  Aligned_cols=178  Identities=19%  Similarity=0.146  Sum_probs=115.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+..         |+.||||+.+.+...                                      
T Consensus       198 ~~~lG~G~fg~V~~~~~~---------~~~vavK~~~~~~~~--------------------------------------  230 (450)
T 1k9a_A          198 LQTIGKGEFGDVMLGDYR---------GNKVAVKCIKNDATA--------------------------------------  230 (450)
T ss_dssp             EEEEEECSSEEEEEEEET---------TEEEEEEEESSCTTS--------------------------------------
T ss_pred             EeeecCcCCeeEEEEEec---------CCeEEEEEeCCchHH--------------------------------------
Confidence            579999999999999885         589999998765210                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc---cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY---PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~---~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~  442 (581)
                         -+|.+|++.+.++.     ++++  .+.+.   .-....++||||++|++|.+++.....   .......++..++.
T Consensus       231 ---~~~~~E~~~l~~l~-----h~ni--v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~  300 (450)
T 1k9a_A          231 ---QAFLAEASVMTQLR-----HSNL--VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE  300 (450)
T ss_dssp             ---HHHHHHHHHHHTCC-----CTTB--CCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhcc-----CCCE--EEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence               12345665554431     2222  22222   112246899999999999999875322   11112334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..||..|++|+|+||.|||++       .+|      .++|+|||++..........        ...-.+.++|.+
T Consensus       301 ~-l~~LH~~~ivHrDlkp~Nill~-------~~~------~~kl~DfG~a~~~~~~~~~~--------~~~~~y~aPE~~  358 (450)
T 1k9a_A          301 A-MEYLEGNNFVHRDLAARNVLVS-------EDN------VAKVSDFGLTKEASSTQDTG--------KLPVKWTAPEAL  358 (450)
T ss_dssp             H-HHHHHHTTEECSCCCGGGEEEC-------TTS------CEEECCCTTCEECC--------------CCCTTTSCHHHH
T ss_pred             H-HHHHHhCCeeCCCCCHhhEEEC-------CCC------CEEEeeCCCcccccccccCC--------CCCcceeCHHHh
Confidence            3 8889999999999999999998       677      89999999998665432111        001124556655


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .. .......|.++|+..+.++++
T Consensus       359 ~~-~~~~~~sDvwslG~~l~el~t  381 (450)
T 1k9a_A          359 RE-KKFSTKSDVWSFGILLWEIYS  381 (450)
T ss_dssp             HS-SCCCHHHHHHHHHHHHHHHHT
T ss_pred             cC-CCCCcHHHHHHHHHHHHHHHh
Confidence            33 334445688888888888876

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.58  E-value=3.6e-15  Score=154.52  Aligned_cols=122  Identities=17%  Similarity=0.163  Sum_probs=71.2

Q ss_pred             cEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          407 AVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      .++||||++|++|.+++.....   .......++..++.+ +..||..|++|+|+||.||+++...    .++      .
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~-l~~LH~~~ivH~dlkp~NIll~~~~----~~~------~  169 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA-IQFLHSHNIAHRDVKPENLLYTSKE----KDA------V  169 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEESCSS----TTC------C
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCHHHEEEEecC----CCc------e
Confidence            4799999999999999865321   122223344444444 8889999999999999999998211    233      6


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++...........+       ....+.+.|.+.. .......|.++|+..+.+++.+
T Consensus       170 ~kl~Dfg~~~~~~~~~~~~~~-------~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g  225 (336)
T 3fhr_A          170 LKLTDFGFAKETTQNALQTPC-------YTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCG  225 (336)
T ss_dssp             EEECCCTTCEEC------------------------------CHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEeccccceeccccccccCC-------CCcCccChhhhCC-CCCCchhhHHHHHHHHHHHHHC
Confidence            999999999877654332211       1223445554422 2222345778888888877765

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.58  E-value=1.6e-15  Score=158.22  Aligned_cols=194  Identities=20%  Similarity=0.131  Sum_probs=119.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......                 .+   ...            
T Consensus        29 ~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~-----------------~~---~~~------------   69 (351)
T 3c0i_A           29 CEVIGKGPFSVVRRCINRET-------GQQFAVKIVDVAKFTS-----------------SP---GLS------------   69 (351)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEEHHHHHT-----------------SS---SCC------------
T ss_pred             eeEEeeCCCEEEEEEEECCC-------CCEEEEEEEEhhhccc-----------------cc---cch------------
Confidence            57899999999999999875       7999999865320000                 00   000            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~~i  441 (581)
                        .-++.+|+..+.++     .+++  +++.+..  ....-++||||++|.+|.+++.....     .......++..++
T Consensus        70 --~~~~~~E~~~l~~l-----~hpn--Iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~  140 (351)
T 3c0i_A           70 --TEDLKREASICHML-----KHPH--IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL  140 (351)
T ss_dssp             --HHHHHHHHHHHHHC-----CCTT--BCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--CCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence              11234455555433     1233  2333322  23445899999999999887654221     1122233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+|+||.|||++       .++   ....++|+|||++..+.......     ......-.+.++|.
T Consensus       141 ~a-l~~lH~~~ivHrDlkp~NIl~~-------~~~---~~~~vkl~Dfg~a~~~~~~~~~~-----~~~~gt~~y~aPE~  204 (351)
T 3c0i_A          141 EA-LRYCHDNNIIHRDVKPHCVLLA-------SKE---NSAPVKLGGFGVAIQLGESGLVA-----GGRVGTPHFMAPEV  204 (351)
T ss_dssp             HH-HHHHHHTTEECSCCSGGGEEEC-------SSS---TTCCEEECCCTTCEECCTTSCBC-----CCCCSCGGGCCHHH
T ss_pred             HH-HHHHHHCCceeccCChHHeEEe-------cCC---CCCcEEEecCcceeEecCCCeee-----cCCcCCcCccCHHH
Confidence            44 8889999999999999999998       222   01269999999998775432100     00011224556666


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. ..+....|.|+++..+.+++.+
T Consensus       205 ~~~-~~~~~~~DiwslG~il~~ll~g  229 (351)
T 3c0i_A          205 VKR-EPYGKPVDVWGCGVILFILLSG  229 (351)
T ss_dssp             HTT-CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             HcC-CCCCchHhhHHHHHHHHHHHHC
Confidence            543 3344566888888888888876

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.58  E-value=6.2e-16  Score=164.04  Aligned_cols=148  Identities=18%  Similarity=0.169  Sum_probs=95.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+..-...                        .    .+      
T Consensus        14 ~~~LG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~------------------------~----~~------   52 (396)
T 4eut_A           14 SDILGQGATANVFRGRHKKT-------GDLFAIKVFNNISFLR------------------------P----VD------   52 (396)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEECGGGGGS------------------------C----HH------
T ss_pred             EEEEEcCCCeEEEEEEECCC-------CcEEEEEEeccccccc------------------------h----HH------
Confidence            57899999999999999875       7999999976421100                        0    00      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCC--CCcEEEEeccCCccHHHHHHhhhc----chhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLV--HPAVLVETYEQGECVSRYVDELQG----HERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~--t~~VLVmEyi~G~~L~~~l~~~~~----~~~~~~~la~~~  440 (581)
                          .+.+|++.+.++.     +++  +++.+.  ...  ...+|||||++|++|.+++.....    .......++..+
T Consensus        53 ----~~~~E~~~l~~l~-----hpn--Iv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi  121 (396)
T 4eut_A           53 ----VQMREFEVLKKLN-----HKN--IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV  121 (396)
T ss_dssp             ----HHHHHHHHHHHCC-----CTT--BCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHhcC-----CCC--CCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHH
Confidence                1233554444431     222  222221  111  244899999999999999864321    112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      +.+ +..||..|++|+|+||+|||+...+.   .++      .++|+|||++..+...
T Consensus       122 ~~a-L~~LH~~~ivH~Dlkp~NIll~~~~~---~~~------~~kL~DFG~a~~~~~~  169 (396)
T 4eut_A          122 VGG-MNHLRENGIVHRNIKPGNIMRVIGED---GQS------VYKLTDFGAARELEDD  169 (396)
T ss_dssp             HHH-HHHHHHTTEECCCCCGGGEEEEECTT---SCE------EEEECCGGGCEECCCG
T ss_pred             HHH-HHHHHHCCEEECCcCHHHEEEeecCC---Cce------eEEEecCCCceEccCC
Confidence            443 88899999999999999999852211   344      7999999999876543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.58  E-value=7.1e-15  Score=147.44  Aligned_cols=190  Identities=15%  Similarity=0.109  Sum_probs=106.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+  +  ..+..||||+.+......                            .        
T Consensus        20 ~~~lg~G~~g~Vy~~~~~~~--~--~~~~~vaiK~~~~~~~~~----------------------------~--------   59 (281)
T 1mp8_A           20 GRCIGEGQFGDVHQGIYMSP--E--NPALAVAIKTCKNCTSDS----------------------------V--------   59 (281)
T ss_dssp             EEEEEECSSSEEEEEEECCC------CCEEEEEEECTTTTSHH----------------------------H--------
T ss_pred             EeEeeecCCeeEEEEEEecC--C--CCceEEEEEeccccCCHH----------------------------H--------
Confidence            57899999999999998653  1  125789999866532110                            0        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|+..+.++     .+++  +++.+.-. ....++||||++|.+|.+++.....  .......++..++.+ +
T Consensus        60 --~~~~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~-l  129 (281)
T 1mp8_A           60 --REKFLQEALTMRQF-----DHPH--IVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA-L  129 (281)
T ss_dssp             --HHHHHHHHHHHHTC-----CCTT--BCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCc--cceEEEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH-H
Confidence              01234455555433     1222  23333222 2445799999999999999865321  111222344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||+||+++       .++      .++|+|||++..+.........    .....-.+.++|.+.. 
T Consensus       130 ~~lH~~~i~H~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~-  191 (281)
T 1mp8_A          130 AYLESKRFVHRDIAARNVLVS-------SND------CVKLGDFGLSRYMEDSTYYKAS----KGKLPIKWMAPESINF-  191 (281)
T ss_dssp             HHHHHTTCCCSCCSGGGEEEE-------ETT------EEEECC-----------------------CCGGGCCHHHHHH-
T ss_pred             HHHHhCCeecccccHHHEEEC-------CCC------CEEECccccccccCcccccccc----cCCCcccccChhhccc-
Confidence            889999999999999999999       667      8999999999876543221100    0000112445554432 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.++|+..+.+++.
T Consensus       192 ~~~~~~~Di~slG~~l~ell~  212 (281)
T 1mp8_A          192 RRFTSASDVWMFGVCMWEILM  212 (281)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCccCchHHHHHHHHHHh
Confidence            223334577777777777663

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.58  E-value=4.8e-16  Score=159.21  Aligned_cols=195  Identities=17%  Similarity=0.187  Sum_probs=120.8

Q ss_pred             hhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          281 SEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       281 ~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      ++....|+ .+.||+|++|.||+|+++.        |+.||||+..+.-...                            
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~----------------------------   78 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVLRD--------GAKVALKRRTPESSQG----------------------------   78 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEECTT--------CCEEEEEECCSCCSSH----------------------------
T ss_pred             HHHHhccCccceeecCCCeeEEEEEECC--------CCEEEEEEecccChHH----------------------------
Confidence            34445565 6789999999999999753        6899999877652211                            


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----chhh
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----HERL  432 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~  432 (581)
                       .          -++.+|.+.+.++     .+++  +++.+.  ......++||||++|++|.+++.....     ....
T Consensus        79 -~----------~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  140 (321)
T 2qkw_B           79 -I----------EEFETEIETLSFC-----RHPH--LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ  140 (321)
T ss_dssp             -H----------HHHHHHHHGGGSC-----CCTT--BCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHH
T ss_pred             -H----------HHHHHHHHHHHhC-----CCCC--EeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHH
Confidence             0          0123344433222     1222  233332  223456899999999999998753211     1112


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh
Q 008021          433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR  512 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~  512 (581)
                      ...++..++.+ +..||..|++|+|+||.||+++       .++      .++|+|||++............   .....
T Consensus       141 ~~~i~~~i~~~-l~~lH~~~ivH~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~---~~~~g  203 (321)
T 2qkw_B          141 RLEICIGAARG-LHYLHTRAIIHRDVKSINILLD-------ENF------VPKITDFGISKKGTELDQTHLS---TVVKG  203 (321)
T ss_dssp             HHHHHHHHHHH-HHHHHHTTEECSCCCSTTEEEC-------TTC------CEEECCCTTCEECSSSSCCCCB---CCCEE
T ss_pred             HHHHHHHHHHH-HHHhcCCCeecCCCCHHHEEEC-------CCC------CEEEeecccccccccccccccc---cccCC
Confidence            23344444443 8889999999999999999998       667      8999999998754321110000   00001


Q ss_pred             hcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          513 RDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       513 ~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ...+.++|.+.. +......|.++|+..+.+++.+
T Consensus       204 t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g  237 (321)
T 2qkw_B          204 TLGYIDPEYFIK-GRLTEKSDVYSFGVVLFEVLCA  237 (321)
T ss_dssp             ETTTCCHHHHHH-CBCCTHHHHHHHHHHHHHHHHC
T ss_pred             CccccCHHHhcC-CCCCcccchHhHHHHHHHHHhC
Confidence            123455555543 3444567888888888888765

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.58  E-value=6.1e-15  Score=152.19  Aligned_cols=195  Identities=16%  Similarity=0.161  Sum_probs=121.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+..........                   ....            
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~~~~-------------------~~~~------------   57 (326)
T 2y0a_A           16 GEELGSGQFAVVKKCREKST-------GLQYAAKFIKKRRTKSSR-------------------RGVS------------   57 (326)
T ss_dssp             EEEEECCSSEEEEEEEETTT-------CCEEEEEEEEBCCSTTCS-------------------SSBC------------
T ss_pred             ceEEeeCCCeEEEEEEECCC-------CcEEEEEEEEcccccccc-------------------chhh------------
Confidence            57899999999999999875       799999997654211000                   0000            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|...+.++.     ++++  ++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        58 --~~~~~~E~~~l~~l~-----hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a-l  127 (326)
T 2y0a_A           58 --REDIEREVSILKEIQ-----HPNV--ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG-V  127 (326)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTB--CCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhCC-----CCCC--CcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHH-H
Confidence              012344555554431     2332  23332  223456899999999999999854221 122223444444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.||++.       .++  .....++|+|||++..++......      .....-.+.++|.+. -
T Consensus       128 ~~lH~~~ivH~Dlkp~NIll~-------~~~--~~~~~~kl~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE~~~-~  191 (326)
T 2y0a_A          128 YYLHSLQIAHFDLKPENIMLL-------DRN--VPKPRIKIIDFGLAHKIDFGNEFK------NIFGTPEFVAPEIVN-Y  191 (326)
T ss_dssp             HHHHHTTEECCCCCGGGEEES-------CSS--SSSCCEEECCCTTCEECCTTSCCC------CCCSCTTTCCHHHHT-T
T ss_pred             HHHHHCCeEcCCCCHHHEEEe-------cCC--CCCCCEEEEECCCCeECCCCCccc------cccCCcCcCCceeec-C
Confidence            889999999999999999998       222  012379999999998775432100      001122355666553 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       192 ~~~~~~~DiwslG~il~~ll~g  213 (326)
T 2y0a_A          192 EPLGLEADMWSIGVITYILLSG  213 (326)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCcHHHHHHHHHHHHHHHHC
Confidence            3344567999999999998877

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.58  E-value=4.1e-14  Score=145.18  Aligned_cols=154  Identities=20%  Similarity=0.225  Sum_probs=98.5

Q ss_pred             Chhhhhcc--CC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhccccccccc
Q 008021          279 RLSEIFDG--FE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWL  355 (581)
Q Consensus       279 ~~~eiF~~--fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l  355 (581)
                      .+.++|+.  |. .+.||+|++|.||+|+....   ....|+.||||+.++.-...                        
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~~~~vavK~~~~~~~~~------------------------   67 (327)
T 3lxl_A           15 QDPTIFEERHLKYISQLGKGNFGSVELCRYDPL---GDNTGALVAVKQLQHSGPDQ------------------------   67 (327)
T ss_dssp             --CCBCCGGGEEEEEEEEEETTEEEEEEEECTT---SSSCSEEEEEEEESSCCHHH------------------------
T ss_pred             ChhhhhchhhhhhhhhccCCCCeEEEEEEeccC---CCCcceEEEEEEeccCCHHH------------------------
Confidence            44455542  33 57999999999999995321   01127999999976542110                        


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc----cCCCCcEEEEeccCCccHHHHHHhhhc--c
Q 008021          356 RLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY----PLVHPAVLVETYEQGECVSRYVDELQG--H  429 (581)
Q Consensus       356 ~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~----~l~t~~VLVmEyi~G~~L~~~l~~~~~--~  429 (581)
                                     .-.+.+|++.+.++     .++++  ++.+.    +-....++||||++|.+|.+++.....  .
T Consensus        68 ---------------~~~~~~E~~~l~~l-----~h~~i--~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  125 (327)
T 3lxl_A           68 ---------------QRDFQREIQILKAL-----HSDFI--VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD  125 (327)
T ss_dssp             ---------------HHHHHHHHHHHHTC-----CCTTB--CCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCC
T ss_pred             ---------------HHHHHHHHHHHHhc-----CCCce--eEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCC
Confidence                           01234555555443     22222  22221    112335799999999999999865322  1


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ......++..++.+ +..||..|++|+|+||+||+++       .+|      .++|+|||++..+
T Consensus       126 ~~~~~~i~~qi~~a-l~~lH~~~ivH~Dikp~NIl~~-------~~~------~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          126 ASRLLLYSSQICKG-MEYLGSRRCVHRDLAARNILVE-------SEA------HVKIADFGLAKLL  177 (327)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEE-------ETT------EEEECCGGGCEEC
T ss_pred             HHHHHHHHHHHHHH-HHHHHhCCccCCCCChhhEEEC-------CCC------CEEEcccccceec
Confidence            22223344444444 8889999999999999999998       677      8999999998754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.58  E-value=7.8e-14  Score=143.21  Aligned_cols=137  Identities=20%  Similarity=0.228  Sum_probs=91.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+..         |+.||||+..+.-..                                      
T Consensus        47 ~~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~--------------------------------------   79 (342)
T 1b6c_B           47 QESIGKGRFGEVWRGKWR---------GEEVAVKIFSSREER--------------------------------------   79 (342)
T ss_dssp             EEEEEEETTEEEEEEEET---------TEEEEEEEECGGGHH--------------------------------------
T ss_pred             EeeecCCCCcEEEEEEEc---------CccEEEEEeCchhHH--------------------------------------
Confidence            579999999999999983         599999997543111                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--C----CCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--V----HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~----t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~  442 (581)
                          ++.+|.+.+....   -.++++  ++.+...  .    ...++||||++|++|.+++............++..++.
T Consensus        80 ----~~~~e~~~~~~~~---l~h~ni--~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~  150 (342)
T 1b6c_B           80 ----SWFREAEIYQTVM---LRHENI--LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTAS  150 (342)
T ss_dssp             ----HHHHHHHHHHHSC---CCCTTB--CCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHhh---cCCCcE--EEEEeeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHH
Confidence                1122332222110   122222  2222111  1    14589999999999999986533222233345544444


Q ss_pred             HHHHHhh--------hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          443 ALLKMLL--------VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       443 a~l~~L~--------~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      + +..+|        ..|++|+|+||.||+++       .++      +++|+|||++...
T Consensus       151 ~-l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~-------~~~------~~kL~Dfg~~~~~  197 (342)
T 1b6c_B          151 G-LAHLHMEIVGTQGKPAIAHRDLKSKNILVK-------KNG------TCCIADLGLAVRH  197 (342)
T ss_dssp             H-HHHHHCCBCSTTCBCEEECSCCSGGGEEEC-------TTS------CEEECCCTTCEEE
T ss_pred             H-HHHHHHHHhhhcccCCeeeCCCCHHHEEEC-------CCC------CEEEEECCCceec
Confidence            4 78899        89999999999999998       667      8999999998544

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.58  E-value=6.3e-15  Score=159.37  Aligned_cols=184  Identities=16%  Similarity=0.176  Sum_probs=117.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...        +..||||+.+++...                                      
T Consensus       189 ~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~--------------------------------------  222 (452)
T 1fmk_A          189 EVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMS--------------------------------------  222 (452)
T ss_dssp             EEEEEECSSCEEEEEEETT--------TEEEEEEECCTTSSC--------------------------------------
T ss_pred             eeeecCCCCeEEEEEEECC--------CceEEEEEeccCCCC--------------------------------------
Confidence            5789999999999999865        478999998765210                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~  444 (581)
                        .-+|.+|++.+.++.     +++  +++.+.-. ....++||||++|++|.+++.....   .......++..++.+ 
T Consensus       223 --~~~~~~E~~~l~~l~-----hp~--iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~-  292 (452)
T 1fmk_A          223 --PEAFLQEAQVMKKLR-----HEK--LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG-  292 (452)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTT--BCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhCC-----CCC--EeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH-
Confidence              012455666665542     222  22222111 2456899999999999999864221   111223344444443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||.|||++       .++      .++|+|||++..+.+.......    .....-.+.++|.+..
T Consensus       293 l~~LH~~~ivHrDlkp~Nill~-------~~~------~~kl~DfG~a~~~~~~~~~~~~----~~~~~~~y~aPE~~~~  355 (452)
T 1fmk_A          293 MAYVERMNYVHRDLRAANILVG-------ENL------VCKVADFGLARLIEDNEYTARQ----GAKFPIKWTAPEAALY  355 (452)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCCCTTC------------------CCGGGSCHHHHHH
T ss_pred             HHHHHhCCeeCCCCChhhEEEC-------CCC------CEEECCCccceecCCCceeccc----CCcccccccCHhHHhc
Confidence            7889999999999999999998       677      8999999999877543211100    0001113556666543


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       +......|.++|+..+.++++
T Consensus       356 -~~~~~~sDvwslG~~l~el~t  376 (452)
T 1fmk_A          356 -GRFTIKSDVWSFGILLTELTT  376 (452)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCCCccccHHhHHHHHHHHHh
Confidence             444456789999999999887

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.58  E-value=2e-13  Score=136.69  Aligned_cols=149  Identities=16%  Similarity=0.125  Sum_probs=98.2

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|. .+.||+|++|+||+|+.... .   ..+..||||+.++.....                                 
T Consensus        13 ~y~~~~~lg~G~~g~Vy~~~~~~~-~---~~~~~vavK~~~~~~~~~---------------------------------   55 (281)
T 3cc6_A           13 DVVLNRILGEGFFGEVYEGVYTNH-K---GEKINVAVKTCKKDCTLD---------------------------------   55 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEECT-T---CCEEEEEEEECCTTSCHH---------------------------------
T ss_pred             ceEEEEEEEecCCeeEEEeEEcCC-C---CCcceEEEEecccccCch---------------------------------
Confidence            344 68999999999999997642 1   124679999977652110                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i  441 (581)
                           ..-.+.+|++.+.++.     +++  +++.+.-+ ....++||||++|.+|.+++.....  .......++..++
T Consensus        56 -----~~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~  123 (281)
T 3cc6_A           56 -----NKEKFMSEAVIMKNLD-----HPH--IVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC  123 (281)
T ss_dssp             -----HHHHHHHHHHHHHHHC-----CTT--BCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHhCC-----CCC--cceEEEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHH
Confidence                 0112445666555552     222  22222211 2345899999999999999865322  1112233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      .+ +..+|..|++|+|+||+||+++       .++      .++|+|||++..+..
T Consensus       124 ~~-l~~lH~~~i~H~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A          124 KA-MAYLESINCVHRDIAVRNILVA-------SPE------CVKLGDFGLSRYIED  165 (281)
T ss_dssp             HH-HHHHHHTTCCCCCCSGGGEEEE-------ETT------EEEECCCCGGGCC--
T ss_pred             HH-HHHHHHCCcccCCCccceEEEC-------CCC------cEEeCccCCCccccc
Confidence            43 8889999999999999999999       667      899999999876544

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.58  E-value=5.8e-16  Score=164.84  Aligned_cols=194  Identities=18%  Similarity=0.129  Sum_probs=123.7

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      +..|+ .+.||+|++|.||+|+.+.+       |+.||||+.......                      ..-.      
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~-------~~~~AiK~~~~~~~~----------------------~~~~------   58 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDT-------KKMYAMKYMNKQKCV----------------------ERNE------   58 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTT-------CCEEEEEEEEHHHHH----------------------HTTC------
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCC-------CCEEEEEEEehhhcc----------------------cHHH------
Confidence            44555 68999999999999999875       799999986532100                      0000      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHI  439 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~  439 (581)
                              .-.+.+|.+.+.++     .+++  +++.+..+  ....++||||++|++|.+++..... .......++..
T Consensus        59 --------~~~~~~E~~il~~l-----~hp~--Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~q  123 (384)
T 4fr4_A           59 --------VRNVFKELQIMQGL-----EHPF--LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE  123 (384)
T ss_dssp             --------HHHHHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHHhC-----CCCC--CCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHH
Confidence                    01223454444332     1232  23333222  3445899999999999998865321 11122334444


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      ++.+ +..||..|++|+|+||+|||++       .+|      .++|+|||++..++......      ...-.-.+.++
T Consensus       124 i~~a-L~~LH~~givHrDlkp~NIll~-------~~g------~vkL~DFG~a~~~~~~~~~~------~~~gt~~Y~aP  183 (384)
T 4fr4_A          124 LVMA-LDYLQNQRIIHRDMKPDNILLD-------EHG------HVHITDFNIAAMLPRETQIT------TMAGTKPYMAP  183 (384)
T ss_dssp             HHHH-HHHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECCTTCCBC------CCCSCGGGCCG
T ss_pred             HHHH-HHHHHHCCceeccCcHHHeEEC-------CCC------CEEEeccceeeeccCCCcee------ccCCCccccCC
Confidence            4443 8889999999999999999998       777      89999999998775432110      01112235566


Q ss_pred             HHHHhh--cCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRL--SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l--~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+...  ..+....|.|+++..+.+++.+
T Consensus       184 E~~~~~~~~~~~~~~DiwSlG~il~elltG  213 (384)
T 4fr4_A          184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRG  213 (384)
T ss_dssp             GGTCCCSSCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             eeeccCCCCCCCccceeechHHHHHHHHhC
Confidence            655432  1244567999999999999876

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.58  E-value=1.7e-14  Score=147.15  Aligned_cols=219  Identities=13%  Similarity=0.028  Sum_probs=128.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....  +    |+.||||+.+..-.                                  ...  
T Consensus        19 ~~~lg~G~~g~V~~~~~~~~--~----~~~vavK~~~~~~~----------------------------------~~~--   56 (339)
T 1z57_A           19 VDTLGEGAFGKVVECIDHKA--G----GRHVAVKIVKNVDR----------------------------------YCE--   56 (339)
T ss_dssp             EEEEEEETTEEEEEEEETTT--T----TEEEEEEEECSSHH----------------------------------HHH--
T ss_pred             EEEEecCCCeEEEEEEecCC--C----CcEEEEEEEecCCc----------------------------------hhH--
Confidence            57899999999999998431  1    69999999764310                                  001  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                          .+.+|.+.+.++...- ......+++.+..  .....++||||+ |.++.+++.....   .......++..++.+
T Consensus        57 ----~~~~e~~~l~~l~~~~-~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~  130 (339)
T 1z57_A           57 ----AARSEIQVLEHLNTTD-PNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS  130 (339)
T ss_dssp             ----HHHHHHHHHHHHHHHC-TTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHhhhcC-CCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence                1233444444443221 1111223333322  234458999999 7888888865321   112223344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccc------cccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSS------QKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~------~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                       +..||..|++|+|+||+|||+...+....      .+.......+++|+|||++...+.....        ......+.
T Consensus       131 -l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~--------~~gt~~y~  201 (339)
T 1z57_A          131 -VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHST--------LVSTRHYR  201 (339)
T ss_dssp             -HHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCS--------SCSCGGGC
T ss_pred             -HHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccccc--------ccCCcccc
Confidence             88899999999999999999972110000      0000000227999999998765433211        01223456


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHHH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNYL  565 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~l  565 (581)
                      ++|.+.. .......|.++|+..+.+++.+.  +......+.+..+.+++
T Consensus       202 aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  250 (339)
T 1z57_A          202 APEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL  250 (339)
T ss_dssp             CHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred             ChHHhhC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            7777654 33445679999999999999873  44445555555554443

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.58  E-value=3.5e-15  Score=157.15  Aligned_cols=196  Identities=16%  Similarity=0.155  Sum_probs=122.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+........                   ....    .       
T Consensus        17 ~~~LG~G~fg~V~~~~~~~~-------~~~~avK~i~~~~~~~~~-------------------~~~~----~-------   59 (361)
T 2yab_A           17 GEELGSGQFAIVKKCREKST-------GLEYAAKFIKKRQSRASR-------------------RGVC----R-------   59 (361)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEEBCSSTTCS-------------------SSBC----H-------
T ss_pred             eeEEeeCcCEEEEEEEECCC-------CCEEEEEEEEcccccccc-------------------chhH----H-------
Confidence            57899999999999999875       799999998765221000                   0000    0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -++.+|...+.++     .+++  +++.+.  +.....++||||++|++|.+++..... .......++..++.+ +
T Consensus        60 ---~~~~~E~~il~~l-----~hpn--Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~a-L  128 (361)
T 2yab_A           60 ---EEIEREVSILRQV-----LHPN--IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG-V  128 (361)
T ss_dssp             ---HHHHHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhC-----CCcC--CCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               1123444444322     1232  223332  223455899999999999999854221 122223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+||++.       .++  ...+.++|+|||++..+.+.....      .....-.+.++|.+.. 
T Consensus       129 ~~LH~~givHrDlkp~NIll~-------~~~--~~~~~vkl~DFG~a~~~~~~~~~~------~~~gt~~y~aPE~~~~-  192 (361)
T 2yab_A          129 NYLHTKKIAHFDLKPENIMLL-------DKN--IPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNY-  192 (361)
T ss_dssp             HHHHHTTEECCCCSGGGEEES-------CTT--SSSCCEEECCCSSCEECCTTCCCC------CCCSCGGGCCHHHHTT-
T ss_pred             HHHHHCCcccCCCCHHHEEEe-------CCC--CCccCEEEEecCCceEcCCCCccc------cCCCCccEECchHHcC-
Confidence            889999999999999999997       222  012279999999998776532100      0111234566666533 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ..+....|.|+++..+.+++.+.
T Consensus       193 ~~~~~~~DiwslGvil~~ll~g~  215 (361)
T 2yab_A          193 EPLGLEADMWSIGVITYILLSGA  215 (361)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSC
T ss_pred             CCCCccccHHHHHHHHHHHHhCC
Confidence            34445679999999999998773

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.58  E-value=3e-15  Score=154.23  Aligned_cols=191  Identities=15%  Similarity=0.094  Sum_probs=119.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+........                           +         
T Consensus        34 ~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~---------------------------~---------   70 (327)
T 3lm5_A           34 SKELGRGKFAVVRQCISKST-------GQEYAAKFLKKRRRGQ---------------------------D---------   70 (327)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEESEETTE---------------------------E---------
T ss_pred             cceeCCCCCeEEEEEEECCC-------CCEEEEEEEehhhcch---------------------------H---------
Confidence            47899999999999999865       7999999876532110                           0         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                       ....+.+|...+.++.    ..+++  ++.+.  ......++||||++|.+|.+++.....   .......++..++.+
T Consensus        71 -~~~~~~~e~~~l~~l~----~~~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~  143 (327)
T 3lm5_A           71 -CRAEILHEIAVLELAK----SCPRV--INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEG  143 (327)
T ss_dssp             -CHHHHHHHHHHHHHTT----TCTTB--CCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHhcc----CCCCE--EEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence             0012334444444332    22332  23322  233455899999999999988643111   112223344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..||..|++|+|+||.||+++...    .+|      .++|+|||++..++......      .......+.++|.+.
T Consensus       144 -L~~LH~~givH~Dikp~NIl~~~~~----~~~------~~kL~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE~~~  206 (327)
T 3lm5_A          144 -VYYLHQNNIVHLDLKPQNILLSSIY----PLG------DIKIVDFGMSRKIGHACELR------EIMGTPEYLAPEILN  206 (327)
T ss_dssp             -HHHHHHTTEECSCCCGGGEEESCBT----TBC------CEEECCGGGCEEC---------------CCCGGGCCHHHHT
T ss_pred             -HHHHHHCCeecCcCChHHEEEecCC----CCC------cEEEeeCccccccCCccccc------cccCCcCccCCeeec
Confidence             8889999999999999999998110    145      89999999998876543211      112333556666653


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       ........|.++++..+.+++.+
T Consensus       207 -~~~~~~~~DiwslG~il~~ll~g  229 (327)
T 3lm5_A          207 -YDPITTATDMWNIGIIAYMLLTH  229 (327)
T ss_dssp             -TCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             -CCCCCchhhHHHHHHHHHHHHhC
Confidence             23444567999999999999876

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.58  E-value=1.7e-13  Score=138.75  Aligned_cols=148  Identities=17%  Similarity=0.209  Sum_probs=98.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....  .....++.||||+.++.....                                     
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~--~~~~~~~~vavK~~~~~~~~~-------------------------------------   68 (313)
T 1t46_A           28 GKTLGAGAFGKVVEATAYGL--IKSDAAMTVAVKMLKPSAHLT-------------------------------------   68 (313)
T ss_dssp             EEEEEECSSEEEEEEEEESS--SSTTCEEEEEEEEECTTCCHH-------------------------------------
T ss_pred             HHhhCccCCcceEEEEEeec--cccchhhhhHHHhcCcchhHH-------------------------------------
Confidence            57899999999999996321  001126899999987652210                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc------------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG------------------  428 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~------------------  428 (581)
                       ..-.+.+|.+.+.++    ..++++  ++.+  .......++||||++|++|.+++.....                  
T Consensus        69 -~~~~~~~E~~~l~~l----~~h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  141 (313)
T 1t46_A           69 -EREALMSELKVLSYL----GNHMNI--VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA  141 (313)
T ss_dssp             -HHHHHHHHHHHHHHH----CCCTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CC
T ss_pred             -HHHHHHHHHHHHhhc----ccCCCe--eeEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccccccccccccc
Confidence             011234566555554    123332  2332  2234556899999999999999865321                  


Q ss_pred             -chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          429 -HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       429 -~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                       .......++..++.+ +..+|..|++|+|+||.||+++       .++      .++|+|||++..+.
T Consensus       142 ~~~~~~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~  196 (313)
T 1t46_A          142 LDLEDLLSFSYQVAKG-MAFLASKNCIHRDLAARNILLT-------HGR------ITKICDFGLARDIK  196 (313)
T ss_dssp             CCHHHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEE-------TTT------EEEECCCGGGSCTT
T ss_pred             CCHHHHHHHHHHHHHH-HHHHHHCCeecCCCccceEEEc-------CCC------CEEEcccccccccc
Confidence             111122344444443 7889999999999999999998       667      89999999987553

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.58  E-value=2.5e-15  Score=152.10  Aligned_cols=168  Identities=18%  Similarity=0.089  Sum_probs=95.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+.++.....   +...-+.... ...-+.     ..+..    ..-
T Consensus        18 ~~~lG~G~~g~Vy~a~~~~~-------~~~vavK~~~~~~~~~---~~~~~~~~~~-~~~~~~-----~~~~~----~~~   77 (298)
T 2zv2_A           18 KDEIGKGSYGVVKLAYNEND-------NTYYAMKVLSKKKLIR---QAGFPRRPPP-RGTRPA-----PGGCI----QPR   77 (298)
T ss_dssp             EEEEEC--CCEEEEEEETTT-------TEEEEEEEEECC-----------------------------------------
T ss_pred             EeEEeecCCEEEEEEEECCC-------CcEEEEEEeehhhhhh---hccccccccc-cccccc-----ccccc----ccc
Confidence            57899999999999999765       7999999987652110   0000000000 000000     00000    000


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                      ...-++.+|.+.+.++.     +++  +++.+.-+    ....++||||++|.+|.++.....-.......++..++.+ 
T Consensus        78 ~~~~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~-  149 (298)
T 2zv2_A           78 GPIEQVYQEIAILKKLD-----HPN--VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKG-  149 (298)
T ss_dssp             ---CHHHHHHHHHHTCC-----CTT--BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHH-
T ss_pred             chHHHHHHHHHHHHhCC-----CCC--CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHH-
Confidence            01123456666655431     232  22333221    2345899999999999876432211222223444444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      +..||..|++|+|+||+|||++       .+|      +++|+|||++..+..
T Consensus       150 l~~lH~~~ivH~Dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~  189 (298)
T 2zv2_A          150 IEYLHYQKIIHRDIKPSNLLVG-------EDG------HIKIADFGVSNEFKG  189 (298)
T ss_dssp             HHHHHHTTEECCCCCGGGEEEC-------TTS------CEEECCCTTCEECSS
T ss_pred             HHHHHHCCeeccCCCHHHEEEC-------CCC------CEEEecCCCcccccc
Confidence            8889999999999999999998       677      899999999876643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.58  E-value=8.9e-14  Score=140.25  Aligned_cols=146  Identities=18%  Similarity=0.201  Sum_probs=92.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....   ....|+.||||+.++......                                    
T Consensus        26 ~~~lg~G~~g~V~~~~~~~~---~~~~~~~vavK~~~~~~~~~~------------------------------------   66 (302)
T 4e5w_A           26 IRDLGEGHFGKVELCRYDPE---GDNTGEQVAVKSLKPESGGNH------------------------------------   66 (302)
T ss_dssp             EEEEEECSSEEEEEEEECTT---SSSCSEEEEEEEEC-----CC------------------------------------
T ss_pred             hhccCCCCceEEEEEEEccc---cCccCeEEEEEEecccccchh------------------------------------
Confidence            47899999999999995311   112379999999876421100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--C--CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--V--HPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~--t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~  442 (581)
                        .-++.+|.+.+.++.     +++  +++.+.-+  .  ..-++||||++|.+|.+++.....  .......++..++.
T Consensus        67 --~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~  137 (302)
T 4e5w_A           67 --IADLKKEIEILRNLY-----HEN--IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICK  137 (302)
T ss_dssp             --HHHHHHHHHHHHTCC-----CTT--BCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhCC-----CCC--eeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHH
Confidence              012334554444331     222  22322211  1  234799999999999999854322  11222334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      + +..||..|++|+|+||+||+++       .+|      .++|+|||++..+.
T Consensus       138 ~-l~~lH~~~i~H~dikp~Nil~~-------~~~------~~kl~Dfg~~~~~~  177 (302)
T 4e5w_A          138 G-MDYLGSRQYVHRDLAARNVLVE-------SEH------QVKIGDFGLTKAIE  177 (302)
T ss_dssp             H-HHHHHHTTEECSCCSGGGEEEE-------ETT------EEEECCCTTCEECC
T ss_pred             H-HHHhhcCCcccCCCchheEEEc-------CCC------CEEECccccccccc
Confidence            3 8889999999999999999998       667      89999999986543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.57  E-value=5.8e-15  Score=149.00  Aligned_cols=187  Identities=17%  Similarity=0.113  Sum_probs=117.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+....-....                                    
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~~------------------------------------   60 (302)
T 2j7t_A           24 VGELGDGAFGKVYKAKNKET-------GALAAAKVIETKSEEEL------------------------------------   60 (302)
T ss_dssp             EEEEECSTTCCEEEEEETTT-------CCEEEEEEEC----CCH------------------------------------
T ss_pred             cceeccCCCeEEEEEEEcCC-------CcEEEEEEecCCCHHHH------------------------------------
Confidence            46799999999999999864       69999999765411100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                         -++.+|.+.+.++     .+++  +++.+.  ......++||||++|.+|.+++.....  .......++..++.+ 
T Consensus        61 ---~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~-  129 (302)
T 2j7t_A           61 ---EDYIVEIEILATC-----DHPY--IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA-  129 (302)
T ss_dssp             ---HHHHHHHHHHHHC-----CCTT--BCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHH-
T ss_pred             ---HHHHHHHHHHhcC-----CCCC--EeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHH-
Confidence               1233455444433     1232  223332  223456899999999999998764222  122223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||.||+++       .+|      .++|+|||++..........     ........+.++|.+..
T Consensus       130 l~~lH~~~i~H~dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~  191 (302)
T 2j7t_A          130 LNFLHSKRIIHRDLKAGNVLMT-------LEG------DIRLADFGVSAKNLKTLQKR-----DSFIGTPYWMAPEVVMC  191 (302)
T ss_dssp             HHHHHHTTCCCCCCSGGGEEEC-------TTS------CEEECCCHHHHHHHHHHHC----------CCGGGCCHHHHHH
T ss_pred             HHHHhcCCcccCCCCHHHEEEC-------CCC------CEEEEECCCCcccccccccc-----ccccCChhhcCCeeecc
Confidence            7889999999999999999998       667      89999999875432211100     11122334556666642


Q ss_pred             ----hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 ----LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 ----l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                          -.......|.++|+..+.+++.+
T Consensus       192 ~~~~~~~~~~~~Di~slG~il~~l~~g  218 (302)
T 2j7t_A          192 ETMKDTPYDYKADIWSLGITLIEMAQI  218 (302)
T ss_dssp             HHTTSTTTTTHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCCCchhhhHHHHHHHHHHHhcC
Confidence                22233456899999999988876

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.57  E-value=9.1e-14  Score=146.00  Aligned_cols=149  Identities=18%  Similarity=0.194  Sum_probs=95.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....  +....++.||||+.+......                                     
T Consensus        76 ~~~LG~G~fg~Vy~~~~~~~--~~~~~~~~vavK~~~~~~~~~-------------------------------------  116 (367)
T 3l9p_A           76 IRGLGHGAFGEVYEGQVSGM--PNDPSPLQVAVKTLPEVCSEQ-------------------------------------  116 (367)
T ss_dssp             EEECCCCSSSCEEEEEECC-------CCEEEEEEECCSSCCHH-------------------------------------
T ss_pred             eeEeeeCCCEEEEEEEEccC--CCCCcceeEEEEecccccChh-------------------------------------
Confidence            57899999999999996531  111236899999875432111                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--------chhhHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--------HERLKSALAH  438 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--------~~~~~~~la~  438 (581)
                       .+.++.+|+..+.++     .++++  ++.+.  ......++||||++|++|.+++.....        .......++.
T Consensus       117 -~~~~~~~E~~~l~~l-----~hpnI--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~  188 (367)
T 3l9p_A          117 -DELDFLMEALIISKF-----NHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR  188 (367)
T ss_dssp             -HHHHHHHHHHHHHHC-----CCTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHH
T ss_pred             -hHHHHHHHHHHHHhC-----CCCCC--CeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHH
Confidence             122345566555543     22332  22222  223456899999999999999865321        1111223444


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      .++.+ +..||..|++|+|+||.|||++       .+|   ....++|+|||++..+
T Consensus       189 qi~~a-L~~LH~~~ivHrDlkp~NIll~-------~~~---~~~~~kL~DFG~a~~~  234 (367)
T 3l9p_A          189 DIACG-CQYLEENHFIHRDIAARNCLLT-------CPG---PGRVAKIGDFGMARDI  234 (367)
T ss_dssp             HHHHH-HHHHHHTTCCCSCCCGGGEEES-------CSS---TTCCEEECCCHHHHHH
T ss_pred             HHHHH-HHHHHhCCeeCCCCChhhEEEe-------cCC---CCceEEECCCcccccc
Confidence            44444 8889999999999999999998       332   1126999999998644

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.57  E-value=4.7e-15  Score=155.84  Aligned_cols=190  Identities=16%  Similarity=0.141  Sum_probs=121.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......  .+                         .       
T Consensus        34 ~~~lG~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~~--~~-------------------------~-------   72 (362)
T 2bdw_A           34 KEELGKGAFSVVRRCVHKTT-------GLEFAAKIINTKKLSA--RD-------------------------F-------   72 (362)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEETTTCCH--HH-------------------------H-------
T ss_pred             eeEEecCCCeEEEEEEECCC-------CCEEEEEEEEcccCCH--HH-------------------------H-------
Confidence            57899999999999999865       7999999976541100  00                         0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|.+.+.++     .++++  ++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        73 ---~~~~~E~~il~~l-----~hpnI--v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~a-l  141 (362)
T 2bdw_A           73 ---QKLEREARICRKL-----QHPNI--VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES-I  141 (362)
T ss_dssp             ---HHHHHHHHHHHHC-----CCTTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhC-----CCCCC--CeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence               1234455555443     13332  23332  223455899999999999988754221 112223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.|||++...    .++      .++|+|||++..+.+.....      .....-.+.++|.+.. 
T Consensus       142 ~~lH~~~ivH~Dlkp~NIll~~~~----~~~------~~kl~DfG~a~~~~~~~~~~------~~~gt~~y~aPE~~~~-  204 (362)
T 2bdw_A          142 AYCHSNGIVHRNLKPENLLLASKA----KGA------AVKLADFGLAIEVNDSEAWH------GFAGTPGYLSPEVLKK-  204 (362)
T ss_dssp             HHHHHTTCBCCCCSGGGEEESCSS----TTC------CEEECCCTTCBCCTTCCSCC------CSCSCTTTCCHHHHTT-
T ss_pred             HHHHHCCeEeccCchHHEEEecCC----CCC------CEEEeecCcceEecCCcccc------cCCCCccccCHHHHcc-
Confidence            889999999999999999998211    123      79999999998775432110      0111224566666543 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..+....|.|+++..+.+++.+
T Consensus       205 ~~~~~~~DiwslG~il~~ll~g  226 (362)
T 2bdw_A          205 DPYSKPVDIWACGVILYILLVG  226 (362)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCchhhHHHHHHHHHHHHHC
Confidence            3344567999999999998877

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.57  E-value=4.2e-14  Score=141.82  Aligned_cols=144  Identities=17%  Similarity=0.145  Sum_probs=93.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.......                                      
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~--------------------------------------   48 (296)
T 4hgt_A           14 GRKIGSGSFGDIYLGTDIAA-------GEEVAIKLECVKTKH--------------------------------------   48 (296)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------TEEEEEEEEEC---C--------------------------------------
T ss_pred             eeeecCCCCeEEEEEEEcCC-------CceEEEEeecccccc--------------------------------------
Confidence            57899999999999998764       799999985443110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                         -++.+|...+.++.    ..+.+..-..+.......++||||+ |.+|.+++.....  .......++..++.+ +.
T Consensus        49 ---~~~~~e~~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~-l~  119 (296)
T 4hgt_A           49 ---PQLHIESKIYKMMQ----GGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISR-IE  119 (296)
T ss_dssp             ---CCHHHHHHHHHHHT----TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHH-HH
T ss_pred             ---hHHHHHHHHHHHhc----CCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHH-HH
Confidence               01223444443332    2222222222222334558999999 9999999864222  222223444444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      .||..|++|+|+||.||++...+    .++      .++|+|||++..+.
T Consensus       120 ~LH~~~ivH~Dlkp~NIl~~~~~----~~~------~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A          120 YIHSKNFIHRDVKPDNFLMGLGK----KGN------LVYIIDFGLAKKYR  159 (296)
T ss_dssp             HHHHTTEECSCCSGGGEEECCGG----GTT------CEEECCCTTCEECB
T ss_pred             HHHHCCeecCCCCHHHeeeeccC----CCC------eEEEecCccceecc
Confidence            89999999999999999994111    445      89999999987543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.57  E-value=1.3e-14  Score=150.85  Aligned_cols=217  Identities=16%  Similarity=0.118  Sum_probs=126.4

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|. .+.||+|++|.||+|+...        |+.||||+.++.....-.                  .....-....   
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~------------------~~~~~~~~~~---   73 (362)
T 3pg1_A           23 PYTVQRFISSGSYGAVCAGVDSE--------GIPVAIKRVFNTVSDGRT------------------VNILSDSFLC---   73 (362)
T ss_dssp             SCEEEEEEEEETTEEEEEEECTT--------SCEEEEEEECEECCTTSC------------------EEGGGSHHHH---
T ss_pred             ceEEeEEeccCCCEEEEEEECCC--------CCeEEEEeccccCCccch------------------hhhhhhhhHH---
Confidence            344 6899999999999999864        699999987654221100                  0000000001   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcc-ccccccc----CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYP----LVHPAVLVETYEQGECVSRYVDELQG--HERLKSALA  437 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~----l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la  437 (581)
                             -.+.+|++.+.++.     ++++. +-..+..    ....-++||||++| ++.+++.....  .......++
T Consensus        74 -------~~~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~  140 (362)
T 3pg1_A           74 -------KRVLREIRLLNHFH-----HPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFM  140 (362)
T ss_dssp             -------HHHHHHHHHHHHCC-----CTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHH
T ss_pred             -------HHHHHHHHHHHhCC-----CcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHH
Confidence                   12345655555442     22221 1111111    11234899999997 56665543211  112223344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..||..|++|+|+||.||+++       .++      .++|+|||++..........      .......+.
T Consensus       141 ~qi~~~-l~~lH~~~ivH~Dlkp~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~~~------~~~~t~~y~  200 (362)
T 3pg1_A          141 YHILLG-LHVLHEAGVVHRDLHPGNILLA-------DNN------DITICDFNLAREDTADANKT------HYVTHRWYR  200 (362)
T ss_dssp             HHHHHH-HHHHHHTTCCCCCCCGGGEEEC-------TTC------CEEECCTTC---------------------CGGGC
T ss_pred             HHHHHH-HHHHHHCcCEecCCChHHEEEc-------CCC------CEEEEecCcccccccccccc------eecccceec
Confidence            444444 8889999999999999999998       667      89999999997654433221      112334567


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      ++|.+..........|.++++..+.+++.+.  +......+.+..+...
T Consensus       201 aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~  249 (362)
T 3pg1_A          201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV  249 (362)
T ss_dssp             CHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             CcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            8888766555556679999999999999873  4445555555555443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.57  E-value=1.7e-14  Score=160.05  Aligned_cols=146  Identities=16%  Similarity=0.186  Sum_probs=96.9

Q ss_pred             CCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       287 fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      +..+.||+|++|+||+|+..         ++.|++|...+.....                          +..-++   
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~---------~~~~~~k~~~~~~~~~--------------------------~~~~~~---  380 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYL---------DFDVIIKERVKKGYRD--------------------------ERLDEN---  380 (540)
T ss_dssp             ---------CCEEEEEEECS---------SCEEEEEEECCCTTSC--------------------------HHHHHH---
T ss_pred             CCCCEEeeCCCEEEEEEEEC---------CCeEEEEEEecccccc--------------------------hhhhhH---
Confidence            45679999999999999543         5899999876642111                          000000   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                        ...-.+.+|.+.+.++.     ++++..|..+.......+|||||++|.+|.+++..       ...++..++++ ++
T Consensus       381 --~~~~~~~~E~~il~~l~-----h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~-------~~~i~~qi~~a-L~  445 (540)
T 3en9_A          381 --IRKSRTAREARYLALVK-----DFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED-------NLDIAYKIGEI-VG  445 (540)
T ss_dssp             --HHHHHHHHHHHHHHHGG-----GGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT-------CTHHHHHHHHH-HH
T ss_pred             --HHHHHHHHHHHHHHhcC-----CCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH-------HHHHHHHHHHH-HH
Confidence              01123566777776652     45666566666556677999999999999998754       12344444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhH
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR  500 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r  500 (581)
                      .||..|++|+|+||+|||++       .        +++|+|||+++.+++...
T Consensus       446 ~LH~~gIiHrDiKp~NILl~-------~--------~~kL~DFGla~~~~~~~~  484 (540)
T 3en9_A          446 KLHKNDVIHNDLTTSNFIFD-------K--------DLYIIDFGLGKISNLDED  484 (540)
T ss_dssp             HHHHTTEECTTCCTTSEEES-------S--------SEEECCCTTCEECCCHHH
T ss_pred             HHHHCcCccCCCCHHHEEEC-------C--------eEEEEECccCEECCCccc
Confidence            89999999999999999998       2        599999999998876543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.57  E-value=8.1e-16  Score=160.50  Aligned_cols=188  Identities=16%  Similarity=0.130  Sum_probs=112.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+........                  +     .            
T Consensus        14 ~~~lG~G~~g~V~~a~~~~~-------~~~vaiK~~~~~~~~~------------------~-----~------------   51 (336)
T 3h4j_B           14 RETLGEGSFGKVKLATHYKT-------QQKVALKFISRQLLKK------------------S-----D------------   51 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEEHHHHHH------------------T-----T------------
T ss_pred             EEEEecCCCeEEEEEEECCC-------CCEEEEEEEehHHccc------------------h-----h------------
Confidence            68899999999999999765       7999999865321000                  0     0            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                       ..-.+.+|.+.+.++     .+++  +++.+.  ......++||||++ +++.+++..... .......++..++.+ +
T Consensus        52 -~~~~~~~E~~~l~~l-----~hpn--Iv~l~~~~~~~~~~~lv~E~~~-g~l~~~l~~~~~l~~~~~~~i~~qi~~a-L  121 (336)
T 3h4j_B           52 -MHMRVEREISYLKLL-----RHPH--IIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICA-I  121 (336)
T ss_dssp             -CSHHHHHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEECCCC-EEHHHHHHHHCSCCHHHHHHHHHHHHHH-H
T ss_pred             -HHHHHHHHHHHHHhC-----CCCC--CCeEEEEEEeCCEEEEEEECCC-CcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence             001233454444322     1233  233332  22344589999995 566666643221 222223444454444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+|||++       .++      .++|+|||++....+.....      .......+.++|.+...
T Consensus       122 ~~LH~~givH~Dlkp~NIll~-------~~~------~~kl~DFG~s~~~~~~~~~~------~~~gt~~y~aPE~~~~~  182 (336)
T 3h4j_B          122 EYCHRHKIVHRDLKPENLLLD-------DNL------NVKIADFGLSNIMTDGNFLK------TSCGSPNYAAPEVINGK  182 (336)
T ss_dssp             HHHHHHTCCCCCCSTTTEEEC-------TTC------CEEECCSSCTBTTTTSBTTC------CCTTSTTTSCGGGSCCS
T ss_pred             HHHHHCCeEecCCchhhEEEc-------CCC------CEEEEEeccceeccCCcccc------cccCCcCcCCHHHHcCC
Confidence            889999999999999999998       667      89999999987665432110      00011233444443322


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+++..+.+++.+
T Consensus       183 ~~~~~~~DiwslG~il~~ll~g  204 (336)
T 3h4j_B          183 LYAGPEVDVWSCGIVLYVMLVG  204 (336)
T ss_dssp             GGGCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCccchhHHHHHHHHHHhC
Confidence            2222345777777777777765

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.57  E-value=7e-15  Score=149.63  Aligned_cols=192  Identities=16%  Similarity=0.079  Sum_probs=117.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+..+.-...                                     
T Consensus        34 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~-------------------------------------   69 (317)
T 2buj_A           34 IQKLGEGGFSYVDLVEGLHD-------GHFYALKRILCHEQQD-------------------------------------   69 (317)
T ss_dssp             EEEEEC--CEEEEEEEETTT-------CCEEEEEEEEESSHHH-------------------------------------
T ss_pred             EEEecCCCCeEEEEEEecCC-------CcEEEEEEEecCCHHH-------------------------------------
Confidence            57899999999999999764       7999999875431100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC------CCCcEEEEeccCCccHHHHHHhhh-----cchhhHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL------VHPAVLVETYEQGECVSRYVDELQ-----GHERLKSALA  437 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l------~t~~VLVmEyi~G~~L~~~l~~~~-----~~~~~~~~la  437 (581)
                        .-.+.+|+..+.++     .+++  +++.+.-.      ....++||||++|.+|.+++....     ........++
T Consensus        70 --~~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~  140 (317)
T 2buj_A           70 --REEAQREADMHRLF-----NHPN--ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL  140 (317)
T ss_dssp             --HHHHHHHHHHHHTC-----CCTT--BCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred             --HHHHHHHHHHHhhc-----CCCC--eeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHH
Confidence              01233455444332     1222  22322211      124579999999999999886521     1112223344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh---hH-HHHHHHHHHHHhh
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT---DR-VNLVEFFKAVARR  513 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~---~r-~~l~~l~~Al~~~  513 (581)
                      ..++.+ +..||..|++|+|+||.||+++       .++      .++|+|||++......   .. ..-..-+......
T Consensus       141 ~qi~~~-L~~LH~~~ivH~dlkp~NIl~~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt  206 (317)
T 2buj_A          141 LGICRG-LEAIHAKGYAHRDLKPTNILLG-------DEG------QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT  206 (317)
T ss_dssp             HHHHHH-HHHHHHTTEECCCCCGGGEEEC-------TTS------CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSC
T ss_pred             HHHHHH-HHHHHhCCcccCCCCHHHEEEc-------CCC------CEEEEecCcchhcccccccccccccccccccccCC
Confidence            444444 7889999999999999999998       667      8999999998765421   11 1111111222223


Q ss_pred             cHHHHHHHHHhhc--CCCCCCCHHHHHHHHHHhhhH
Q 008021          514 DGRTAAECTLRLS--KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       514 D~~~~~e~ll~l~--~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..+.++|.+....  ......|.++|+..+.+++.+
T Consensus       207 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  242 (317)
T 2buj_A          207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG  242 (317)
T ss_dssp             GGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHS
T ss_pred             cccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhC
Confidence            3445555443211  123456899999999998866

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.57  E-value=4.4e-15  Score=151.61  Aligned_cols=197  Identities=17%  Similarity=0.123  Sum_probs=114.8

Q ss_pred             hhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          282 EIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       282 eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      ..+..|. .+.||+|++|+||+|+...+       |+.||||+.++.....                             
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~-----------------------------   74 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVR-------ERIVALKLMSETLSSD-----------------------------   74 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTT-------TEEEEEEECGGGGGGS-----------------------------
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCC-------CeEEEEEecCcccccC-----------------------------
Confidence            3455555 68999999999999998764       7999999976542110                             


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALA  437 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la  437 (581)
                       .+..      -.+.+|...+.++     .+++  +++.+.  ......++||||++|.+|.+++..... .......++
T Consensus        75 -~~~~------~~~~~e~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  140 (309)
T 2h34_A           75 -PVFR------TRMQREARTAGRL-----QEPH--VVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIV  140 (309)
T ss_dssp             -HHHH------HHHHHHHHHHTTC-----CCTT--BCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHH
T ss_pred             -HHHH------HHHHHHHHHHhhc-----CCCC--eeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHH
Confidence             0000      1223444444322     1222  223222  223456899999999999999865321 122223444


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..+|..|++|+|+||.||+++       .+|      .++|+|||++............    .......+.
T Consensus       141 ~qi~~~-l~~lH~~~i~H~dlkp~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~----~~~~~~~y~  202 (309)
T 2h34_A          141 RQIGSA-LDAAHAAGATHRDVKPENILVS-------ADD------FAYLVDFGIASATTDEKLTQLG----NTVGTLYYM  202 (309)
T ss_dssp             HHHHHH-HHHHHHTTCCCSCCCGGGEEEC-------TTS------CEEECSCCC--------------------CCGGGC
T ss_pred             HHHHHH-HHHHHHCcCCcCCCChHHEEEc-------CCC------CEEEecCccCcccccccccccc----ccCCCcCcc
Confidence            444444 7889999999999999999998       667      8999999998876554322111    111222334


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|.+.. .......|.++|+..+.+++.+
T Consensus       203 aPE~~~~-~~~~~~~Di~slG~il~~l~~g  231 (309)
T 2h34_A          203 APERFSE-SHATYRADIYALTCVLYECLTG  231 (309)
T ss_dssp             CGGGTCC-----CCCHHHHHHHHHHHHHHS
T ss_pred             CHHHHcC-CCCCchHhHHHHHHHHHHHHHC
Confidence            4444322 2334467888888888888876

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.57  E-value=6.9e-15  Score=147.12  Aligned_cols=190  Identities=15%  Similarity=0.125  Sum_probs=119.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+..+.....                           +..       
T Consensus        11 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~---------------------------~~~-------   49 (284)
T 3kk8_A           11 KEELGKGAFSVVRRCVHKTT-------GLEFAAKIINTKKLSA---------------------------RDF-------   49 (284)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEEGGGCCH---------------------------HHH-------
T ss_pred             hhhhcCcCCeEEEEEEEcCC-------CceEEEEEeecccCCH---------------------------HHH-------
Confidence            57899999999999999865       7999999976541100                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|++.+.++.     +++  +++.+..  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        50 ---~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~-l  118 (284)
T 3kk8_A           50 ---QKLEREARICRKLQ-----HPN--IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES-I  118 (284)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHHcC-----CCC--cCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               12344555554441     233  3333322  23445899999999999887754321 122223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.||+++       .++   ....++|+|||++...+......      .......+.++|.+.. 
T Consensus       119 ~~lH~~~i~H~dikp~Nil~~-------~~~---~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~y~aPE~~~~-  181 (284)
T 3kk8_A          119 AYCHSNGIVHRNLKPENLLLA-------SKA---KGAAVKLADFGLAIEVNDSEAWH------GFAGTPGYLSPEVLKK-  181 (284)
T ss_dssp             HHHHHTTEECSCCCGGGEEES-------SSS---TTCCEEECCCTTCEECCSSCBCC------CSCSCGGGCCHHHHTT-
T ss_pred             HHHHHCCcCcCCCCHHHEEEe-------cCC---CCCcEEEeeceeeEEcccCcccc------CCCCCcCCcCchhhcC-
Confidence            889999999999999999998       222   01269999999997665432110      0011223455665533 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++++..+.+++.+
T Consensus       182 ~~~~~~~Di~slG~~l~~l~~g  203 (284)
T 3kk8_A          182 DPYSKPVDIWACGVILYILLVG  203 (284)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCcccchHHHHHHHHHHHHC
Confidence            3344567888998888888876

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.57  E-value=7.6e-15  Score=159.01  Aligned_cols=192  Identities=15%  Similarity=0.067  Sum_probs=122.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||+|+........  .                                  
T Consensus        16 ~~~LG~G~fg~V~~~~~~~~-------~~~~a~K~i~~~~~~~--~----------------------------------   52 (444)
T 3soa_A           16 FEELGKGAFSVVRRCVKVLA-------GQEYAAMIINTKKLSA--R----------------------------------   52 (444)
T ss_dssp             EEEEEEC--CEEEEEEETTT-------TEEEEEEEEESCSCHH--H----------------------------------
T ss_pred             EEEeccCCCeEEEEEEECCC-------CcEEEEEEEEcccCCH--H----------------------------------
Confidence            57899999999999999875       7999999976542100  0                                  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                       ..-++.+|++.+.++     +++++  ++.+.  ......++||||++|++|.+.+..... .......++..++.+ +
T Consensus        53 -~~~~~~~E~~il~~l-----~hpnI--v~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~a-L  123 (444)
T 3soa_A           53 -DHQKLEREARICRLL-----KHPNI--VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA-V  123 (444)
T ss_dssp             -HHHHHHHHHHHHHHC-----CBTTB--CCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHH-H
T ss_pred             -HHHHHHHHHHHHHhC-----CCcCC--CeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence             011234565555443     23332  23332  233456899999999999988754321 122223344444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+||||+|||++...    .++      .++|+|||++..+.......     ......-++.++|.+.. 
T Consensus       124 ~~lH~~givHrDlKp~NIll~~~~----~~~------~vkL~DFG~a~~~~~~~~~~-----~~~~gt~~Y~APE~l~~-  187 (444)
T 3soa_A          124 LHCHQMGVVHRNLKPENLLLASKL----KGA------AVKLADFGLAIEVEGEQQAW-----FGFAGTPGYLSPEVLRK-  187 (444)
T ss_dssp             HHHHHTTCBCCCCSSTTEEESBSS----TTC------CEEECCCSSCBCCCTTCCBC-----CCSCSCGGGCCHHHHTT-
T ss_pred             HHHHHCCccccCCCHHHEEEeccC----CCC------cEEEccCceeEEecCCCcee-----ecccCCcccCCHHHhcC-
Confidence            889999999999999999998211    234      89999999998776532110     00112234566776543 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ..+....|.|+++..+.+++.+.
T Consensus       188 ~~~~~~~DIwSlGvilyell~G~  210 (444)
T 3soa_A          188 DPYGKPVDLWACGVILYILLVGY  210 (444)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCccccHHHHHHHHHHHhCC
Confidence            34455679999999999988773

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.57  E-value=3.4e-15  Score=149.79  Aligned_cols=190  Identities=16%  Similarity=0.124  Sum_probs=121.4

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|.||+|+...+       ++.||||+..+.....                       .         
T Consensus        15 ~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~-----------------------~---------   55 (284)
T 2vgo_A           15 DFDIGRPLGKGKFGNVYLAREKQN-------KFIMALKVLFKSQLEK-----------------------E---------   55 (284)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEEEHHHHHH-----------------------T---------
T ss_pred             hceeeheecCCCCeEEEEEEEcCC-------CcEEEEEEEcccccch-----------------------H---------
Confidence            344 68999999999999999764       6999999865421000                       0         


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                          ..+-.+.+|...+.++     .+++  +++.+.  ......++||||++|.+|.+++..... .......++..++
T Consensus        56 ----~~~~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~  124 (284)
T 2vgo_A           56 ----GVEHQLRREIEIQSHL-----RHPN--ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA  124 (284)
T ss_dssp             ----TCHHHHHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHhcC-----CCCC--EeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHH
Confidence                0011234455444433     1233  333332  223455899999999999998865321 1222233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+|++|+||+++       .+|      .++|+|||++...........       .....+.+.|.
T Consensus       125 ~~-l~~lH~~~i~H~dl~p~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~-------~~~~~y~aPE~  183 (284)
T 2vgo_A          125 DA-LHYCHERKVIHRDIKPENLLMG-------YKG------ELKIADFGWSVHAPSLRRRTM-------CGTLDYLPPEM  183 (284)
T ss_dssp             HH-HHHHHTTTEECCCCSGGGEEEC-------TTC------CEEECCCTTCEECSSSCBCCC-------CSCGGGCCHHH
T ss_pred             HH-HHHHHHCCceecCCCHHHEEEc-------CCC------CEEEecccccccCcccccccc-------cCCCCcCCHHH
Confidence            44 7889999999999999999998       667      899999999876543221110       11223455565


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.. .......|.++|+..+.+++.+
T Consensus       184 ~~~-~~~~~~~Di~slG~il~~l~~g  208 (284)
T 2vgo_A          184 IEG-KTHDEKVDLWCAGVLCYEFLVG  208 (284)
T ss_dssp             HTT-CCBCTTHHHHHHHHHHHHHHHS
T ss_pred             hcc-CCCCcccchhhHHHHHHHHHHC
Confidence            543 3344567889999888888876

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.57  E-value=3.9e-14  Score=141.60  Aligned_cols=195  Identities=16%  Similarity=0.142  Sum_probs=121.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+........                   ....            
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~~~~-------------------~~~~------------   51 (283)
T 3bhy_A           10 GEELGSGQFAIVRKCRQKGT-------GKEYAAKFIKKRRLSSSR-------------------RGVS------------   51 (283)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEEBCSSTTCS-------------------SSBC------------
T ss_pred             HHhhcccCceEEEEEEEcCC-------CCeeehHHhhhccccccc-------------------cchH------------
Confidence            57899999999999999864       699999997754211000                   0000            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|++.+.++.     +++  +++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        52 --~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~-l  121 (283)
T 3bhy_A           52 --REEIEREVNILREIR-----HPN--IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG-V  121 (283)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhCC-----CCC--eeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence              012344555554432     233  223322  223456899999999999999865321 222223445444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.||++.       .++  ....+++|+|||++..+.......      .......+.++|.+. -
T Consensus       122 ~~lH~~~i~H~dl~p~Nil~~-------~~~--~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~y~aPE~~~-~  185 (283)
T 3bhy_A          122 HYLHSKRIAHFDLKPENIMLL-------DKN--VPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVN-Y  185 (283)
T ss_dssp             HHHHHTTEECSCCSGGGEEES-------CSS--SSSCCEEECCCTTCEECC--------------CCCGGGCCHHHHT-T
T ss_pred             HHHHhCCccCCCCChHHEEEe-------cCC--CCCCceEEEecccceeccCCCccc------ccCCCcCccCcceec-C
Confidence            889999999999999999998       221  012379999999998876543211      112233455666553 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       186 ~~~~~~~Di~slG~il~~l~~g  207 (283)
T 3bhy_A          186 EPLGLEADMWSIGVITYILLSG  207 (283)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCcchhhhhHHHHHHHHHHC
Confidence            3444567999999999998876

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.57  E-value=4.5e-16  Score=159.35  Aligned_cols=190  Identities=18%  Similarity=0.178  Sum_probs=117.6

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|. .+.||+|++|.||+|+..+        |+.||||+.++.....                                 
T Consensus        31 ~y~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~---------------------------------   69 (326)
T 3uim_A           31 NFSNKNILGRGGFGKVYKGRLAD--------GTLVAVKRLKEERTQG---------------------------------   69 (326)
T ss_dssp             SSCSTTEEECCSSSEEEEECCSS--------SCCEEEEECCC--------------------------------------
T ss_pred             ccccceeEecCCCcEEEEEEecC--------CCEEEEEEeccccCch---------------------------------
Confidence            344 5789999999999998653        6899999976542110                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALA  437 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la  437 (581)
                           .+..+.+|.+.+.++     .+++  +++.+.  ......++||||++|.+|.+++.....     .......++
T Consensus        70 -----~~~~~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~  137 (326)
T 3uim_A           70 -----GELQFQTEVEMISMA-----VHRN--LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA  137 (326)
T ss_dssp             -----CCCHHHHHHHGGGTC-----CCTT--BCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHhc-----cCCC--ccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHH
Confidence                 011234454433222     1222  223332  233456899999999999999865321     111223344


Q ss_pred             HHHHHHHHHHhhhC---CeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          438 HIGTHALLKMLLVD---NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       438 ~~~i~a~l~~L~~~---G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      ..++.+ +..||..   |++|+|+||+|||++       .++      .++|+|||++..++........    .....-
T Consensus       138 ~~i~~~-l~~lH~~~~~~ivH~Dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~----~~~gt~  199 (326)
T 3uim_A          138 LGSARG-LAYLHDHCDPKIIHRDVKAANILLD-------EEF------EAVVGDFGLAKLMDYKDTHVTT----AVRGTI  199 (326)
T ss_dssp             HHHHHH-HHHHHHSSSSCEECCCCSGGGEEEC-------TTC------CEEECCCSSCEECCSSSSCEEC----CCCSCG
T ss_pred             HHHHHH-HHHHHhCCCCCeEeCCCchhhEEEC-------CCC------CEEeccCccccccCcccccccc----cccCCc
Confidence            444443 8889999   999999999999998       666      8999999999765432110000    000112


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.++|.+.. .......|.++|+..+.+++.+
T Consensus       200 ~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g  231 (326)
T 3uim_A          200 GHIAPEYLST-GKSSEKTDVFGYGVMLLELITG  231 (326)
T ss_dssp             GGCCHHHHHH-SEECHHHHHHHHHHHHHHHHHC
T ss_pred             CccCHHHhcc-CCCCccccchhHHHHHHHHHhC
Confidence            3455555533 3344456888888888888775

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.57  E-value=2.2e-14  Score=147.37  Aligned_cols=212  Identities=13%  Similarity=0.051  Sum_probs=125.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  |    ++.||||+.+..-.                                  ..   
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~--~----~~~vavK~~~~~~~----------------------------------~~---   60 (355)
T 2eu9_A           24 VGNLGEGTFGKVVECLDHAR--G----KSQVALKIIRNVGK----------------------------------YR---   60 (355)
T ss_dssp             EEEEEEETTEEEEEEEETTT--T----TEEEEEEEECSCHH----------------------------------HH---
T ss_pred             EEEeeccCCeEEEEEEecCC--C----ceEEEEEEEccccc----------------------------------ch---
Confidence            57899999999999998764  2    48999999765310                                  00   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhh---cchhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQ---GHERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~---~~~~~~~~la~~~i~a  443 (581)
                         -.+.+|.+.+.++...-.. ....+...+  .......+|||||++|..+. ++....   ........++..++.+
T Consensus        61 ---~~~~~E~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~-~l~~~~~~~~~~~~~~~i~~qi~~~  135 (355)
T 2eu9_A           61 ---EAARLEINVLKKIKEKDKE-NKFLCVLMSDWFNFHGHMCIAFELLGKNTFE-FLKENNFQPYPLPHVRHMAYQLCHA  135 (355)
T ss_dssp             ---HHHHHHHHHHHHHHHHCTT-SCSCBCCEEEEEEETTEEEEEEECCCCBHHH-HHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             ---hHHHHHHHHHHHHhhcCCC-CceeEEEeeeeeeeCCeEEEEEeccCCChHH-HHHhccCCCCCHHHHHHHHHHHHHH
Confidence               1123455555554432111 111122222  22234568999999665544 443322   1112223344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccc------------cccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKK------------SSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~------------~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                       +..||..|++|+|+||+|||+...+..            ...++      .++|+|||++.........        ..
T Consensus       136 -L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~------~~kl~Dfg~~~~~~~~~~~--------~~  200 (355)
T 2eu9_A          136 -LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT------SIRVADFGSATFDHEHHTT--------IV  200 (355)
T ss_dssp             -HHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCC------CEEECCCTTCEETTSCCCS--------SC
T ss_pred             -HHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCC------cEEEeecCccccccccccC--------Cc
Confidence             888999999999999999999521100            00234      8999999998765433211        11


Q ss_pred             hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          512 RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      ..-.+.+.|.+.. .......|.++|+..+.+++.+.  +......+.+..+.++
T Consensus       201 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  254 (355)
T 2eu9_A          201 ATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI  254 (355)
T ss_dssp             SCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             CCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            2234566777654 33445679999999999999873  4444444544444444

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.56  E-value=2.4e-13  Score=135.69  Aligned_cols=142  Identities=16%  Similarity=0.228  Sum_probs=95.8

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      +.+. .+.||+|++|+||+|+...        ++.||||+.+++....                                
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~--------------------------------   52 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMSP--------------------------------   52 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT--------TEEEEEEEECTTSSCH--------------------------------
T ss_pred             HhhhheeeecCCCCeEEEEEEEcC--------CcEEEEEEecCCcccH--------------------------------
Confidence            3344 5789999999999999764        5899999977642110                                


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHI  439 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~  439 (581)
                              -++.+|++.+.++.     +++  +++.+.-. ....++||||++|.+|.+++.....   .......++..
T Consensus        53 --------~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~q  117 (279)
T 1qpc_A           53 --------DAFLAEANLMKQLQ-----HQR--LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ  117 (279)
T ss_dssp             --------HHHHHHHHHHHHCC-----CTT--BCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHhCC-----CcC--cceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHH
Confidence                    12344555554431     222  22222211 2346899999999999998854221   11122334444


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ++.+ +..||..|++|+|+||+||+++       .++      .++|+|||++..+
T Consensus       118 i~~~-l~~lH~~~i~H~dikp~Nil~~-------~~~------~~kl~Dfg~~~~~  159 (279)
T 1qpc_A          118 IAEG-MAFIEERNYIHRDLRAANILVS-------DTL------SCKIADFGLARLI  159 (279)
T ss_dssp             HHHH-HHHHHHTTEECSCCSGGGEEEC-------TTS------CEEECCCTTCEEC
T ss_pred             HHHH-HHHHHHCCeeccCCCHhhEEEc-------CCC------CEEECCCcccccc
Confidence            4443 8889999999999999999998       667      8999999998754

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.56  E-value=4.8e-15  Score=158.79  Aligned_cols=201  Identities=15%  Similarity=0.034  Sum_probs=123.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+++.+       |+.||||+...+.. ...+                                  
T Consensus        59 ~~~lG~G~fg~Vy~~~~~~~-------~~~vaiK~~~~~~~-~~~~----------------------------------   96 (420)
T 1j1b_A           59 TKVIGNGSFGVVYQAKLCDS-------GELVAIKKVLQDKR-FKNR----------------------------------   96 (420)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEECCTT-SCCH----------------------------------
T ss_pred             eeEEeeCCCEEEEEEEECCC-------CcEEEEEEecccch-hHHH----------------------------------
Confidence            57899999999999999865       79999998765421 1111                                  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcc-cccccccC---CC--CcEEEEeccCCccHHHHHHhhh-----cchhhHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVS-FPKPVYPL---VH--PAVLVETYEQGECVSRYVDELQ-----GHERLKSALA  437 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~-vP~~~~~l---~t--~~VLVmEyi~G~~L~~~l~~~~-----~~~~~~~~la  437 (581)
                              |.+.+.++     .++++. +-..+...   ..  .-+|||||++| .+.+++....     ........++
T Consensus        97 --------E~~il~~l-----~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~  162 (420)
T 1j1b_A           97 --------ELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM  162 (420)
T ss_dssp             --------HHHHHHTC-----CCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             --------HHHHHHHc-----CCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHH
Confidence                    22222221     122211 11111110   01  13589999998 4544443211     1111123344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..||..|++|+||||+|||++       .++     ..++|+|||++..+.......      ......++.
T Consensus       163 ~qi~~a-L~~LH~~~ivHrDlkp~NILl~-------~~~-----~~~kl~DFG~a~~~~~~~~~~------~~~~t~~y~  223 (420)
T 1j1b_A          163 YQLFRS-LAYIHSFGICHRDIKPQNLLLD-------PDT-----AVLKLCDFGSAKQLVRGEPNV------SYICSRYYR  223 (420)
T ss_dssp             HHHHHH-HHHHHTTTEECSCCSGGGEEEE-------TTT-----TEEEECCCTTCEECCTTCCCC------SCCSCTTSC
T ss_pred             HHHHHH-HHHHHHCCccccCCChhhEEEe-------CCC-----CeEEeccchhhhhcccCCCce------eeeeCCCcC
Confidence            444444 8889999999999999999998       332     178999999998765432110      011234577


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      +.|.+.....+....|.|+|++.+.+++.+.  +......+.+.++.+.
T Consensus       224 aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~  272 (420)
T 1j1b_A          224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV  272 (420)
T ss_dssp             CHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             CHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            8888866555666789999999999999883  5555555555555543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.56  E-value=1.7e-15  Score=159.59  Aligned_cols=194  Identities=12%  Similarity=0.016  Sum_probs=121.4

Q ss_pred             ceeeccc--ceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHH
Q 008021          289 EAPVASG--SIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV  366 (581)
Q Consensus       289 ~~PIgsG--SigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~  366 (581)
                      .+.||+|  ++|.||+|+.+.+       |+.||||+.+......                           +..     
T Consensus        30 ~~~lG~G~~~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~---------------------------~~~-----   70 (389)
T 3gni_B           30 LTVIGKGFEDLMTVNLARYKPT-------GEYVTVRRINLEACSN---------------------------EMV-----   70 (389)
T ss_dssp             EEEEEEETTTTEEEEEEEETTT-------CCEEEEEEEEGGGSCH---------------------------HHH-----
T ss_pred             EecccCCcCCceEEEEEEEcCC-------CCEEEEEEecccccCh---------------------------HHH-----
Confidence            5789999  9999999999865       7999999976542110                           000     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHH
Q 008021          367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGT  441 (581)
Q Consensus       367 ~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i  441 (581)
                           -.+.+|.+.+.++.     ++++  .+.+.  ......++||||++|.+|.+++.....   .......++..++
T Consensus        71 -----~~~~~E~~~l~~l~-----h~ni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~  138 (389)
T 3gni_B           71 -----TFLQGELHVSKLFN-----HPNI--VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL  138 (389)
T ss_dssp             -----HHHHHHHHHHHHCC-----CTTB--CCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHhCC-----CCCC--CcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHH
Confidence                 11234554444331     2332  22222  223445899999999999999865311   1122233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHH-HH-HHHHHHHHhhcHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRV-NL-VEFFKAVARRDGRTAA  519 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~-~l-~~l~~Al~~~D~~~~~  519 (581)
                      .+ +..||..|++|+|+||+|||++       .+|      .++|+|||.+..+...... .. ...-......-.+.++
T Consensus       139 ~~-l~~LH~~~ivHrDlkp~NIll~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  204 (389)
T 3gni_B          139 KA-LDYIHHMGYVHRSVKASHILIS-------VDG------KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP  204 (389)
T ss_dssp             HH-HHHHHHTTEECCCCSGGGEEEC-------TTC------CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCH
T ss_pred             HH-HHHHHhCCeecCCCCHHHEEEc-------CCC------CEEEcccccceeeccccccccccccccccccccccccCH
Confidence            43 8889999999999999999998       677      8999999987644221100 00 0000000011235677


Q ss_pred             HHHHhh-cCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRL-SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l-~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+..- .......|.|+++..+.+++.+
T Consensus       205 E~~~~~~~~~~~~~DiwslG~il~el~~g  233 (389)
T 3gni_B          205 EVLQQNLQGYDAKSDIYSVGITACELANG  233 (389)
T ss_dssp             HHHSTTSSCBCTHHHHHHHHHHHHHHHHS
T ss_pred             HHHhccCCCCCcHhHHHHHHHHHHHHHHC
Confidence            776543 3345567999999999999877

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.56  E-value=5.2e-15  Score=147.99  Aligned_cols=182  Identities=19%  Similarity=0.161  Sum_probs=107.7

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      .+++ .+.||+|++|.||+|+..         |+.||||+.+++..                               .  
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~-------------------------------~--   58 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYR---------GNKVAVKCIKNDAT-------------------------------A--   58 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET---------TEEEEEEECCCCC-----------------------------------
T ss_pred             hhceEEeEEecCCCceEEEEEEc---------CCEEEEEEecchhH-------------------------------H--
Confidence            3444 578999999999999874         58999999765410                               0  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc---cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY---PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALA  437 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~---~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la  437 (581)
                              -++.+|++.+.++    . +++  +.+.+.   +.....++||||++|.+|.+++.....   .......++
T Consensus        59 --------~~~~~E~~~l~~l----~-h~~--iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  123 (278)
T 1byg_A           59 --------QAFLAEASVMTQL----R-HSN--LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS  123 (278)
T ss_dssp             --------HHHHHTHHHHTTC----C-CTT--BCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHH
T ss_pred             --------HHHHHHHHHHHhC----C-CCC--EeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHH
Confidence                    0123444444332    1 222  222222   222345899999999999999865321   111122344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..+|..|++|+|+||.||+++       .++      .++|+|||++...+......        ...-.+.
T Consensus       124 ~~i~~~-l~~lH~~~i~H~dlkp~Nil~~-------~~~------~~~l~Dfg~~~~~~~~~~~~--------~~~~~y~  181 (278)
T 1byg_A          124 LDVCEA-MEYLEGNNFVHRDLAARNVLVS-------EDN------VAKVSDFGLTKEASSTQDTG--------KLPVKWT  181 (278)
T ss_dssp             HHHHHH-HHHHHHTTCCCSCCSGGGEEEC-------TTS------CEEECCCCC--------------------CCTTTS
T ss_pred             HHHHHH-HHHHHhCCccccCCCcceEEEe-------CCC------cEEEeeccccccccccccCC--------Ccccccc
Confidence            444433 7889999999999999999998       667      89999999987665432211        0111244


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ++|.+.. .......|.++|+..+.++++
T Consensus       182 aPE~~~~-~~~~~~~Di~slG~il~~l~t  209 (278)
T 1byg_A          182 APEALRE-KKFSTKSDVWSFGILLWEIYS  209 (278)
T ss_dssp             CHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             CHHHhCC-CCCCchhcHHHHHHHHHHHHh
Confidence            4454432 223334577777777777765

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.56  E-value=2.4e-15  Score=150.05  Aligned_cols=120  Identities=13%  Similarity=0.149  Sum_probs=75.3

Q ss_pred             cEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          407 AVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      .++||||++|.+|.+++.....   .......++..++.+ +..||..|++|+|+||+||+++       .++      +
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~-------~~~------~  160 (284)
T 2a19_B           95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKG-VDYIHSKKLINRDLKPSNIFLV-------DTK------Q  160 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEE-------ETT------E
T ss_pred             EEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHH-HHHHHhCCeeeccCCHHHEEEc-------CCC------C
Confidence            4799999999999999865321   112223344444444 7889999999999999999999       667      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|+|||++..+.......      .......+.++|.+.. .......|.++|+..+.+++.+
T Consensus       161 ~kl~Dfg~~~~~~~~~~~~------~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~  217 (284)
T 2a19_B          161 VKIGDFGLVTSLKNDGKRT------RSKGTLRYMSPEQISS-QDYGKEVDLYALGLILAELLHV  217 (284)
T ss_dssp             EEECCCTTCEESSCCSCCC------CCCSCCTTSCHHHHHC-SCCCTHHHHHHHHHHHHHHHSC
T ss_pred             EEECcchhheecccccccc------ccCCcccccChhhhcc-CCCcchhhhHHHHHHHHHHHhc
Confidence            9999999987664321100      0001112334444322 2223345666666666666543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.56  E-value=3e-15  Score=151.61  Aligned_cols=190  Identities=15%  Similarity=0.079  Sum_probs=112.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+....-...                             .       
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~-----------------------------~-------   52 (320)
T 2i6l_A           16 LKPLGCGGNGLVFSAVDNDC-------DKRVAIKKIVLTDPQS-----------------------------V-------   52 (320)
T ss_dssp             EEECC-----CEEEEEETTT-------TEEEEEEEEECCSHHH-----------------------------H-------
T ss_pred             EEEeccCCCeEEEEEEECCC-------CeEEEEEEEecCChHH-----------------------------H-------
Confidence            57899999999999999875       7999999876541110                             0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc----------------cCCCCcEEEEeccCCccHHHHHHhhhcchhh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY----------------PLVHPAVLVETYEQGECVSRYVDELQGHERL  432 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~----------------~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~  432 (581)
                         -++.+|.+.+.++.     ++++  .+.+.                ......++||||++| +|.+++.........
T Consensus        53 ---~~~~~e~~~l~~l~-----h~~i--v~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~  121 (320)
T 2i6l_A           53 ---KHALREIKIIRRLD-----HDNI--VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEH  121 (320)
T ss_dssp             ---HHHHHHHHHHHTCC-----CTTB--CCEEEEECTTSCBCCC----CCSCSEEEEEEECCSE-EHHHHHTTCCCCHHH
T ss_pred             ---HHHHHHHHHHHhcC-----CCCe--eEEEEeccccccccccccccccccCceeEEeeccCC-CHHHHhhcCCccHHH
Confidence               01233444443321     2221  11111                111345799999996 899887542222222


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh
Q 008021          433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR  512 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~  512 (581)
                      ...++..++.+ +..||..|++|+|+||+||+++.      .++      .++|+|||++..+++.....-  .......
T Consensus       122 ~~~~~~qi~~~-l~~lH~~~i~H~dlkp~Nil~~~------~~~------~~kl~Dfg~~~~~~~~~~~~~--~~~~~~~  186 (320)
T 2i6l_A          122 ARLFMYQLLRG-LKYIHSANVLHRDLKPANLFINT------EDL------VLKIGDFGLARIMDPHYSHKG--HLSEGLV  186 (320)
T ss_dssp             HHHHHHHHHHH-HHHHHHTTCBCCCCSGGGEEEET------TTT------EEEECCCTTCBCC----------CCCGGGS
T ss_pred             HHHHHHHHHHH-HHHHHhCCEecCCCCHHHEEEcC------CCC------eEEEccCccccccCCCccccc--ccccccc
Confidence            33445454444 88899999999999999999971      344      899999999987754321110  0000011


Q ss_pred             hcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          513 RDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       513 ~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ...+.++|.+..-.......|.++|+..+.+++.+
T Consensus       187 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g  221 (320)
T 2i6l_A          187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG  221 (320)
T ss_dssp             CCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cccccCcHHhcCcccCCchhhhHhHHHHHHHHHhC
Confidence            23356677765544455567999999999999887

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.56  E-value=6.7e-15  Score=149.32  Aligned_cols=189  Identities=17%  Similarity=0.172  Sum_probs=114.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+.+......                                     
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~-------------------------------------   49 (304)
T 2jam_A           14 MEVLGSGAFSEVFLVKQRLT-------GKLFALKCIKKSPAFR-------------------------------------   49 (304)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEECC-----------------------------------------
T ss_pred             eeeccCCCCceEEEEEECCC-------CCEEEEEEEecccccc-------------------------------------
Confidence            57899999999999999764       6999999976541100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~~  447 (581)
                        +-.+.+|...+.++     .++++.-..-+.......++||||++|.+|.+++..... .......++..++.+ +..
T Consensus        50 --~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~-l~~  121 (304)
T 2jam_A           50 --DSSLENEIAVLKKI-----KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA-VKY  121 (304)
T ss_dssp             ----HHHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH-HHH
T ss_pred             --hHHHHHHHHHHHhC-----CCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHH-HHH
Confidence              01133455444433     123322111122233455899999999999998754322 122223344444444 788


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      ||..|++|+|+||.||++...+    .++      .++|+|||++...........       .....+.++|.+.. ..
T Consensus       122 lH~~~i~H~dikp~NIl~~~~~----~~~------~~kl~Dfg~~~~~~~~~~~~~-------~~~~~y~aPE~~~~-~~  183 (304)
T 2jam_A          122 LHENGIVHRDLKPENLLYLTPE----ENS------KIMITDFGLSKMEQNGIMSTA-------CGTPGYVAPEVLAQ-KP  183 (304)
T ss_dssp             HHHTTCCCCSCCGGGCEESSSS----TTC------CEEBCSCSTTCCCCCBTTHHH-------HSCCCBCCTTTBSS-CS
T ss_pred             HHHCCccccCCCHHHEEEecCC----CCC------CEEEccCCcceecCCCccccc-------cCCCCccChHHhcc-CC
Confidence            9999999999999999994110    344      899999999876544322111       11222333333221 12


Q ss_pred             CCCCCCHHHHHHHHHHhhhH
Q 008021          528 QQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .....|.++++..+.+++.+
T Consensus       184 ~~~~~Di~slG~il~~l~~g  203 (304)
T 2jam_A          184 YSKAVDCWSIGVITYILLCG  203 (304)
T ss_dssp             CCHHHHHHHHHHHHHHHHHS
T ss_pred             CCchhhHHHHHHHHHHHHHC
Confidence            22345777777777777765

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.56  E-value=5e-15  Score=150.45  Aligned_cols=192  Identities=15%  Similarity=0.105  Sum_probs=109.9

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|. .+.||+|++|.||+|+...+       |+.||||+.++.-...                          .+.    
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~--------------------------~~~----   75 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACLLD-------GVPVALKKVQIFDLMD--------------------------AKA----   75 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEETTT-------CCEEEEEEECTTSSCC--------------------------HHH----
T ss_pred             ceEEEEeecCCCCceEEEEEEcCC-------CceEEEEeeehhhccC--------------------------HHH----
Confidence            344 58899999999999998764       6999999977531100                          000    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALA  437 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la  437 (581)
                            .-++.+|++.+.++.     +++  +++.+..  .....++||||++|.+|.+++.....     .......++
T Consensus        76 ------~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~  142 (310)
T 2wqm_A           76 ------RADCIKEIDLLKQLN-----HPN--VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF  142 (310)
T ss_dssp             ------HHHHHHHHHHHHTCC-----CTT--BCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHhCC-----CCC--EeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHH
Confidence                  112344555554331     222  2333322  22455799999999999998864211     111222344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++.+ +..||..|++|+|+||.||+++       .+|      .++|+|||++..+.......     ........+.
T Consensus       143 ~qi~~~-l~~LH~~~i~H~dl~p~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~y~  203 (310)
T 2wqm_A          143 VQLCSA-LEHMHSRRVMHRDIKPANVFIT-------ATG------VVKLGDLGLGRFFSSKTTAA-----HSLVGTPYYM  203 (310)
T ss_dssp             HHHHHH-HHHHHHTTCCCCCCCGGGEEEC-------TTS------CEEECCC-----------------------CCSSC
T ss_pred             HHHHHH-HHHHhhCCeeCCCCcHHHEEEc-------CCC------CEEEEeccceeeecCCCccc-----cccCCCeeEe
Confidence            444444 7889999999999999999998       667      89999999988765432211     1111222344


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.|.+.. .......|.++|+..+.+++.+
T Consensus       204 aPE~~~~-~~~~~~~Dv~slG~il~~l~~g  232 (310)
T 2wqm_A          204 SPERIHE-NGYNFKSDIWSLGCLLYEMAAL  232 (310)
T ss_dssp             CHHHHTT-CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             ChHHhCC-CCCCchhhHHHHHHHHHHHHhC
Confidence            5555432 2233345778888888877765

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.56  E-value=8.2e-15  Score=151.81  Aligned_cols=206  Identities=15%  Similarity=0.065  Sum_probs=115.8

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ..|. .+.||+|++|.||+|+.+.+       |+.||||+...+... ....                            
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~-~~~~----------------------------   66 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKST-------GMSVAIKKVIQDPRF-RNRE----------------------------   66 (360)
T ss_dssp             TTEEEC----------CEEEEETTT-------CCEEEEEEEECCTTC-CCHH----------------------------
T ss_pred             cceEEEEEEecCCCeEEEEEEECCC-------CCEEEEEEEecCccc-cHHH----------------------------
Confidence            3454 67899999999999999865       799999987544111 0011                            


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC---CC------CcEEEEeccCCccHHHHHHhhhc----ch
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL---VH------PAVLVETYEQGECVSRYVDELQG----HE  430 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l---~t------~~VLVmEyi~G~~L~~~l~~~~~----~~  430 (581)
                                 ..|.+.+..+     .++++  .+.+.-+   ..      ..++||||++|.....+......    ..
T Consensus        67 -----------~~~~~~l~~l-----~h~ni--v~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~  128 (360)
T 3e3p_A           67 -----------LQIMQDLAVL-----HHPNI--VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPP  128 (360)
T ss_dssp             -----------HHHHHHHHHH-----CCTTB--CCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCH
T ss_pred             -----------HHHHHHHHhc-----CCCCc--ccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCH
Confidence                       1122222222     12222  1221111   00      14689999998644332221111    11


Q ss_pred             hhHHHHHHHHHHHHHHHhh--hCCeEecCCCCCCEEEeeccccccc-ccccCCCCeEEEEecccccccCHhhHHHHHHHH
Q 008021          431 RLKSALAHIGTHALLKMLL--VDNFIHADMHPGNILVRVAQKKSSQ-KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF  507 (581)
Q Consensus       431 ~~~~~la~~~i~a~l~~L~--~~G~~H~DlHPGNILV~~~~~~~~~-~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~  507 (581)
                      .....++..++.+ +..+|  ..|++|+|+||+|||++       . ++      .++|+|||++..++......     
T Consensus       129 ~~~~~~~~qi~~a-l~~lH~~~~~ivH~Dlkp~NIll~-------~~~~------~~kl~Dfg~a~~~~~~~~~~-----  189 (360)
T 3e3p_A          129 ILIKVFLFQLIRS-IGCLHLPSVNVCHRDIKPHNVLVN-------EADG------TLKLCDFGSAKKLSPSEPNV-----  189 (360)
T ss_dssp             HHHHHHHHHHHHH-HHHHTSTTTCCBCSCCCGGGEEEE-------TTTT------EEEECCCTTCBCCCTTSCCC-----
T ss_pred             HHHHHHHHHHHHH-HHHHhCCCCCeecCcCCHHHEEEe-------CCCC------cEEEeeCCCceecCCCCCcc-----
Confidence            1122334344433 67888  99999999999999998       4 56      89999999998776543211     


Q ss_pred             HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       508 ~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                       .......+.++|.+..........|.++|+..+.+++.+.  +......+.+..+.+.
T Consensus       190 -~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~  247 (360)
T 3e3p_A          190 -AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV  247 (360)
T ss_dssp             -STTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             -cccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence             0112334677887765444556779999999999999883  5555555666555543

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.56  E-value=8.6e-15  Score=159.00  Aligned_cols=190  Identities=15%  Similarity=0.105  Sum_probs=123.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+........                      ...            
T Consensus        31 ~~~lg~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~~----------------------~~~------------   69 (484)
T 3nyv_A           31 QRVLGKGSFGEVILCKDKIT-------GQECAVKVISKRQVKQ----------------------KTD------------   69 (484)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEETTTCCB----------------------SSC------------
T ss_pred             eeEEecCCCEEEEEEEECCC-------CCEEEEEEEEhhhccc----------------------chH------------
Confidence            57899999999999999865       7999999975431100                      000            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|...+.++     ++++  +++.+.-  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        70 --~~~~~~E~~~l~~l-----~hpn--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~-l  139 (484)
T 3nyv_A           70 --KESLLREVQLLKQL-----DHPN--IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG-I  139 (484)
T ss_dssp             --HHHHHHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--CCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence              01123444444332     1233  3333322  23445899999999999988754222 112223445444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.|||+....    .++      .++|+|||++..+.......      .....-++.++|.+.  
T Consensus       140 ~~lH~~~ivH~Dlkp~Nil~~~~~----~~~------~~kl~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE~~~--  201 (484)
T 3nyv_A          140 TYMHKNKIVHRDLKPENLLLESKS----KDA------NIRIIDFGLSTHFEASKKMK------DKIGTAYYIAPEVLH--  201 (484)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESSSS----TTC------CEEECCTTHHHHBCCCCSHH------HHTTGGGTCCHHHHH--
T ss_pred             HHHHHCCeeeCCCCHHHEEEecCC----CCC------cEEEEeeeeeEEcccccccc------cCCCCccccCceeec--
Confidence            889999999999999999996111    344      89999999998765543211      112334566777664  


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.+....|.|+++..+.+++.+
T Consensus       202 ~~~~~~~DiwslG~il~~ll~g  223 (484)
T 3nyv_A          202 GTYDEKCDVWSTGVILYILLSG  223 (484)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcceeHHHHHHHHHHHHC
Confidence            3455667999999999999876

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.56  E-value=9e-15  Score=152.87  Aligned_cols=203  Identities=13%  Similarity=0.005  Sum_probs=121.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+.+..-.                                  ..   
T Consensus        42 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~----------------------------------~~---   77 (397)
T 1wak_A           42 IRKLGWGHFSTVWLSWDIQG-------KKFVAMKVVKSAEH----------------------------------YT---   77 (397)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEECSCHH----------------------------------HH---
T ss_pred             EEEeeecCCeeEEEEEecCC-------CeEEEEEEEecCCc----------------------------------ch---
Confidence            57899999999999998764       79999999765410                                  00   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCC-CcccccccccC------CCCcEEEEeccCCccHHHHHHhhh--cchhhHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWK-DVSFPKPVYPL------VHPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHI  439 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~-~V~vP~~~~~l------~t~~VLVmEyi~G~~L~~~l~~~~--~~~~~~~~la~~  439 (581)
                         -++.+|.+.+.++.......+ ...+.+.+..+      ....+|||||++|..+..+.....  ........++..
T Consensus        78 ---~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~q  154 (397)
T 1wak_A           78 ---ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ  154 (397)
T ss_dssp             ---HHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHH
Confidence               112345555555543211111 11223333222      124589999996665555543311  112222344545


Q ss_pred             HHHHHHHHhhhC-CeEecCCCCCCEEEeecccc------------------c---------ccccc---------cCCCC
Q 008021          440 GTHALLKMLLVD-NFIHADMHPGNILVRVAQKK------------------S---------SQKRL---------FRSKP  482 (581)
Q Consensus       440 ~i~a~l~~L~~~-G~~H~DlHPGNILV~~~~~~------------------~---------~~~g~---------~~~~~  482 (581)
                      ++.+ +..||.. |++|+|+||+|||++.....                  .         ...+.         .....
T Consensus       155 i~~a-L~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (397)
T 1wak_A          155 VLQG-LDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKL  233 (397)
T ss_dssp             HHHH-HHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGC
T ss_pred             HHHH-HHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccccccccccc
Confidence            5444 8889998 99999999999999832100                  0         00000         00123


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .++|+|||++..+.......        ...-.+.+.|.+... ......|.|+|+..+.+++.+.
T Consensus       234 ~~kl~DfG~a~~~~~~~~~~--------~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~  290 (397)
T 1wak_A          234 KVKIADLGNACWVHKHFTED--------IQTRQYRSLEVLIGS-GYNTPADIWSTACMAFELATGD  290 (397)
T ss_dssp             CEEECCGGGCEETTBCSCSC--------CSCGGGCCHHHHHTS-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ceEeccccccccccccCccC--------CCCCcccCChhhcCC-CCCcHHHHHHHHHHHHHHhhCC
Confidence            79999999998765432111        123356777776553 3445679999999999999873

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.56  E-value=8.3e-15  Score=162.06  Aligned_cols=184  Identities=16%  Similarity=0.176  Sum_probs=120.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|++..        +..||||+.+++...                                      
T Consensus       272 ~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~--------------------------------------  305 (535)
T 2h8h_A          272 EVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMS--------------------------------------  305 (535)
T ss_dssp             EEEEEECSSEEEEEEEETT--------TEEEEEEEECTTSSC--------------------------------------
T ss_pred             heecccCCCeEEEEEEECC--------CceEEEEEeCCCCCC--------------------------------------
Confidence            5789999999999999865        478999998775210                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~  444 (581)
                        .-+|.+|++.+.++.     ++++  .+.+.-. ....+|||||++|++|.+++.....   .......++..++.+ 
T Consensus       306 --~~~~~~E~~~l~~l~-----hpni--v~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~-  375 (535)
T 2h8h_A          306 --PEAFLQEAQVMKKLR-----HEKL--VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG-  375 (535)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTB--CCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhCC-----CCCE--eeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHH-
Confidence              012455666665542     2222  2222111 2456899999999999999864221   111223344444443 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+||||.|||++       .++      .++|+|||++..+.........    .....-.+.+.|.+..
T Consensus       376 L~~LH~~~ivHrDlkp~NIll~-------~~~------~~kl~DFG~a~~~~~~~~~~~~----~~~~~~~y~aPE~~~~  438 (535)
T 2h8h_A          376 MAYVERMNYVHRDLRAANILVG-------ENL------VCKVADFGLARLIEDNEYTARQ----GAKFPIKWTAPEAALY  438 (535)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCTTSTTTCCCHHHHTTC----STTSCGGGSCHHHHHH
T ss_pred             HHHHHhCCeeCCCCCHhhEEEc-------CCC------cEEEcccccceecCCCceeccc----CCcCcccccCHHHhcc
Confidence            7889999999999999999998       677      8999999999887653211100    0000012456665543


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                       +......|.++|+..+.+++.
T Consensus       439 -~~~~~~sDvwSlGv~l~el~t  459 (535)
T 2h8h_A          439 -GRFTIKSDVWSFGILLTELTT  459 (535)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHTT
T ss_pred             -CCCCchhhHHHHHHHHHHHHh
Confidence             344456688999998888887

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.56  E-value=7e-15  Score=147.66  Aligned_cols=187  Identities=13%  Similarity=0.072  Sum_probs=116.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ...||+|++|+||+|+...+       ++.||||+.+..-...                             .       
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~-----------------------------~-------   63 (295)
T 2clq_A           27 RVVLGKGTYGIVYAGRDLSN-------QVRIAIKEIPERDSRY-----------------------------S-------   63 (295)
T ss_dssp             BCEEEECSSSEEEEEEETTT-------CCEEEEEEEECCCC---------------------------------------
T ss_pred             cEEEeecCcEEEEEEEECCC-------CeEEEEEEccCCchHH-----------------------------H-------
Confidence            45899999999999998764       6999999876541100                             0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc----hhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH----ERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~----~~~~~~la~~~i~  442 (581)
                         -.+.+|...+.++     .+++  +++.+.  ......++||||++|.+|.+++......    ......++..++.
T Consensus        64 ---~~~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~  133 (295)
T 2clq_A           64 ---QPLHEEIALHKHL-----KHKN--IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE  133 (295)
T ss_dssp             ---HHHHHHHHHHHTC-----CCTT--BCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--EeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHH
Confidence               1123344433322     1222  222222  2234458999999999999998653221    1111223444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeeccccccc-ccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ-KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~-~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      + +..||..|++|+|++|.||+++       . ++      .++|+|||++..+.......     ........+.++|.
T Consensus       134 ~-l~~lH~~~i~H~dl~p~Nil~~-------~~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~  194 (295)
T 2clq_A          134 G-LKYLHDNQIVHRDIKGDNVLIN-------TYSG------VLKISDFGTSKRLAGINPCT-----ETFTGTLQYMAPEI  194 (295)
T ss_dssp             H-HHHHHHTTEECCCCSGGGEEEE-------TTTC------CEEECCTTTCEESCC----------CCCCCCGGGCCHHH
T ss_pred             H-HHHHHhCCEEccCCChhhEEEE-------CCCC------CEEEeecccccccCCCCCcc-----cccCCCccccChhh
Confidence            3 8889999999999999999998       4 56      89999999998765432110     00011223455565


Q ss_pred             HHhhc-CCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLS-KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~-~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +..-. ......|.++|+..+.+++.+
T Consensus       195 ~~~~~~~~~~~~Di~slG~il~~l~~g  221 (295)
T 2clq_A          195 IDKGPRGYGKAADIWSLGCTIIEMATG  221 (295)
T ss_dssp             HHHGGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred             hcCCCCCCCcHHHHHHHHHHHHHHHHC
Confidence            54321 133456888888888888876

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.56  E-value=1.2e-14  Score=150.74  Aligned_cols=190  Identities=11%  Similarity=0.108  Sum_probs=116.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....        ++.||||+........                           +..       
T Consensus        14 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~---------------------------~~~-------   51 (343)
T 3dbq_A           14 LKQIGSGGSSKVFQVLNEK--------KQIYAIKYVNLEEADN---------------------------QTL-------   51 (343)
T ss_dssp             EEEESCCSSEEEEEEECTT--------SCEEEEEEEECTTCCH---------------------------HHH-------
T ss_pred             EEEEecCCCeEEEEEEeCC--------CCEEEEEEeeccccch---------------------------HHH-------
Confidence            5789999999999998854        6899999976542110                           001       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|...+.++...   .++  +++.+..  .....++|||+ .|.+|.+++..... .......++..++.+ +
T Consensus        52 ---~~~~~E~~~l~~l~~~---~~~--iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a-l  121 (343)
T 3dbq_A           52 ---DSYRNEIAYLNKLQQH---SDK--IIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEA-V  121 (343)
T ss_dssp             ---HHHHHHHHHHHHHTTT---CTT--BCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhhhhc---CCc--eEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               1234566666555321   122  2333322  22345899995 57799998865322 122223444444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.|||+.        +|      .++|+|||++..+.+.......   ....-.-.+.++|.+...
T Consensus       122 ~~lH~~~iiHrDikp~NIll~--------~~------~~kl~DFG~a~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~  184 (343)
T 3dbq_A          122 HTIHQHGIVHSDLKPANFLIV--------DG------MLKLIDFGIANQMQPDTTSVVK---DSQVGTVNYMPPEAIKDM  184 (343)
T ss_dssp             HHHHHTTCCCCCCCGGGEEEE--------TT------EEEECCCSSSCCC---------------CCCCSSCCHHHHHHC
T ss_pred             HHHHhCCeecCCCCcceEEEE--------CC------cEEEeecccccccCcccccccC---CCCcCCcCcCCHHHHhhc
Confidence            889999999999999999997        34      7999999999887654332211   111223455667776542


Q ss_pred             ----------cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 ----------SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ----------~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                                .......|.|+|+..+.+++.+
T Consensus       185 ~~~~~~~~~~~~~~~~~DiwslG~il~ell~g  216 (343)
T 3dbq_A          185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYG  216 (343)
T ss_dssp             C-----------CCHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccCCCchhhHHHHHHHHHHHHhC
Confidence                      2233346888999888888876

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.55  E-value=5.3e-13  Score=137.43  Aligned_cols=149  Identities=17%  Similarity=0.211  Sum_probs=95.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...........++.||||+.++.....                            .        
T Consensus        40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------------~--------   83 (334)
T 2pvf_A           40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK----------------------------D--------   83 (334)
T ss_dssp             EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHH----------------------------H--------
T ss_pred             eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHH----------------------------H--------
Confidence            5899999999999999853100011236899999987652110                            0        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----------------c
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----------------H  429 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~  429 (581)
                        .-++.+|.+.+.++.    .++++  ++.+.  ......++||||++|.+|.+++.....                 .
T Consensus        84 --~~~~~~E~~~l~~l~----~hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  155 (334)
T 2pvf_A           84 --LSDLVSEMEMMKMIG----KHKNI--INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT  155 (334)
T ss_dssp             --HHHHHHHHHHHHHHC----CCTTB--CCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCC
T ss_pred             --HHHHHHHHHHHHHhh----cCCCE--eeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCC
Confidence              012344555555441    23332  22222  223456899999999999999865321                 1


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ......++..++.+ +..||..|++|+|+||.||+++       .+|      .++|+|||++..+
T Consensus       156 ~~~~~~i~~qi~~a-L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kL~Dfg~~~~~  207 (334)
T 2pvf_A          156 FKDLVSCTYQLARG-MEYLASQKCIHRDLAARNVLVT-------ENN------VMKIADFGLARDI  207 (334)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEC-------TTC------CEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHH-HHHHHhCCeeCCCCccceEEEc-------CCC------CEEEccccccccc
Confidence            11122344444443 7889999999999999999998       667      8999999998654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.55  E-value=4.3e-15  Score=154.46  Aligned_cols=192  Identities=14%  Similarity=0.054  Sum_probs=118.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.+.+...                                  ... 
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~----------------------------------~~~-   61 (373)
T 1q8y_A           24 VRKLGWGHFSTVWLAKDMVN-------NTHVAMKIVRGDKVY----------------------------------TEA-   61 (373)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEECSCHHH----------------------------------HHH-
T ss_pred             EEeeeecCCeEEEEEEecCC-------CcEEEEEEecCCccc----------------------------------hhh-
Confidence            57899999999999998764       799999998754110                                  001 


Q ss_pred             HHHHHHHHHHHHHHHHHHhc------ccCCCcccccccccCC------CCcEEEEeccCCccHHHHHHhhhc---chhhH
Q 008021          369 MSQVDLAREAAHLSRFIYNF------RRWKDVSFPKPVYPLV------HPAVLVETYEQGECVSRYVDELQG---HERLK  433 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f------~~~~~V~vP~~~~~l~------t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~  433 (581)
                           +.+|.+.+.++.+.-      ..+++  +++.+..+.      ...++||||+ |.+|.+++.....   .....
T Consensus        62 -----~~~e~~~l~~l~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~  133 (373)
T 1q8y_A           62 -----AEDEIKLLQRVNDADNTKEDSMGANH--ILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYV  133 (373)
T ss_dssp             -----HHHHHHHHHHHHHTCCSHHHHHHHTT--BCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHH
T ss_pred             -----hhHHHHHHHHhhcccccchhccccch--HHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHH
Confidence                 122333333332110      00111  222222111      1357999999 8899998865322   11222


Q ss_pred             HHHHHHHHHHHHHHhhhC-CeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHh
Q 008021          434 SALAHIGTHALLKMLLVD-NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR  512 (581)
Q Consensus       434 ~~la~~~i~a~l~~L~~~-G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~  512 (581)
                      ..++..++.+ +..||.. |++|+|+||+|||++...... ..+      .++|+|||++..++......        ..
T Consensus       134 ~~i~~qi~~a-L~~lH~~~~ivH~Dikp~NIll~~~~~~~-~~~------~~kl~Dfg~a~~~~~~~~~~--------~~  197 (373)
T 1q8y_A          134 KQISKQLLLG-LDYMHRRCGIIHTDIKPENVLMEIVDSPE-NLI------QIKIADLGNACWYDEHYTNS--------IQ  197 (373)
T ss_dssp             HHHHHHHHHH-HHHHHHTTCEECSCCSGGGEEEEEEETTT-TEE------EEEECCCTTCEETTBCCCSC--------CS
T ss_pred             HHHHHHHHHH-HHHHHhcCCEEecCCChHHeEEeccCCCc-Ccc------eEEEcccccccccCCCCCCC--------CC
Confidence            3344444444 7889998 999999999999997322101 233      89999999998765432111        11


Q ss_pred             hcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          513 RDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       513 ~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .-.+.++|.+.. .......|.++|+..+.+++.+
T Consensus       198 t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g  231 (373)
T 1q8y_A          198 TREYRSPEVLLG-APWGCGADIWSTACLIFELITG  231 (373)
T ss_dssp             CGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CccccCcHHHhC-CCCCchHhHHHHHHHHHHHHhC
Confidence            234566777654 3344567999999999999887

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.55  E-value=8.2e-14  Score=142.71  Aligned_cols=146  Identities=17%  Similarity=0.147  Sum_probs=95.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|..+..   ....|+.||||+.+.+....                                     
T Consensus        36 ~~~lG~G~~g~V~~~~~~~~---~~~~~~~vavK~~~~~~~~~-------------------------------------   75 (318)
T 3lxp_A           36 IRDLGEGHFGKVSLYCYDPT---NDGTGEMVAVKALKADAGPQ-------------------------------------   75 (318)
T ss_dssp             EEEEEECSSEEEEEEEECSC---C--CCEEEEEEEECTTCCHH-------------------------------------
T ss_pred             hheecCCCCeEEEEEEEccC---CCCCCcEEEEEEeccccChH-------------------------------------
Confidence            47899999999998875421   11237999999987652111                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                       ..-.+.+|.+.+.++.     +++  +++.+.-.    ...-++||||++|.+|.+++............++..++.+ 
T Consensus        76 -~~~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~-  146 (318)
T 3lxp_A           76 -HRSGWKQEIDILRTLY-----HEH--IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEG-  146 (318)
T ss_dssp             -HHHHHHHHHHHHHHCC-----CTT--BCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHH-
T ss_pred             -HHHHHHHHHHHHHhCC-----Ccc--hhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHH-
Confidence             0112344555554432     222  22222211    1234799999999999999865332222233444444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      +..||..|++|+|+||+||+++       .++      .++|+|||++..++
T Consensus       147 l~~LH~~~ivH~Dikp~Nil~~-------~~~------~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          147 MAYLHAQHYIHRDLAARNVLLD-------NDR------LVKIGDFGLAKAVP  185 (318)
T ss_dssp             HHHHHHTTEECSCCSGGGEEEC-------TTC------CEEECCGGGCEECC
T ss_pred             HHHHHhCCccCCCCchheEEEc-------CCC------CEEECCcccccccc
Confidence            8889999999999999999998       667      89999999987553

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.55  E-value=1.4e-14  Score=148.36  Aligned_cols=195  Identities=16%  Similarity=0.174  Sum_probs=122.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......-.                   ....            
T Consensus        17 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~-------------------~~~~------------   58 (321)
T 2a2a_A           17 GEELGSGQFAIVKKCREKST-------GLEYAAKFIKKRQSRASR-------------------RGVS------------   58 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEEBCSSSSCS-------------------SSBC------------
T ss_pred             eeEeeecCCEEEEEEEECCC-------CeEEEEEEEecccccccc-------------------cchh------------
Confidence            57899999999999999865       799999998765221100                   0000            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|...+.++.     +++  +++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        59 --~~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a-L  128 (321)
T 2a2a_A           59 --REEIEREVSILRQVL-----HHN--VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG-V  128 (321)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhCC-----CCC--cceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence              012344555554431     233  223332  223456899999999999999864221 122223444444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+||+++       .++  ...++++|+|||++..+.+.....      .......+.++|.+.. 
T Consensus       129 ~~lH~~~ivH~dikp~NIl~~-------~~~--~~~~~~kl~Dfg~~~~~~~~~~~~------~~~gt~~y~aPE~~~~-  192 (321)
T 2a2a_A          129 NYLHTKKIAHFDLKPENIMLL-------DKN--IPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNY-  192 (321)
T ss_dssp             HHHHHTTEECCCCSGGGEEES-------CTT--SSSCCEEECCCTTCEECCTTCCCC------CCCSCGGGCCHHHHTT-
T ss_pred             HHHHhCCeecCCCChHHEEEe-------cCC--CCcCCEEEccCccceecCcccccc------ccCCCCCccCcccccC-
Confidence            889999999999999999998       322  012279999999998765432100      0011224556665532 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       193 ~~~~~~~Di~slG~il~~l~~g  214 (321)
T 2a2a_A          193 EPLGLEADMWSIGVITYILLSG  214 (321)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCccccHHHHHHHHHHHHC
Confidence            3344567899999999998876

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.55  E-value=1.5e-14  Score=148.26  Aligned_cols=187  Identities=14%  Similarity=0.097  Sum_probs=105.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+........                                   
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~~~-----------------------------------   64 (327)
T 3aln_A           27 LGEIGRGAYGSVNKMVHKPS-------GQIMAVKRIRSTVDEKEQ-----------------------------------   64 (327)
T ss_dssp             -CEEEECSSEEEEEEEETTT-------TEEEEEEEEECCCCHHHH-----------------------------------
T ss_pred             hheeccCCCEEEEEEEEcCC-------CCEEEEEEeecccCchHH-----------------------------------
Confidence            57899999999999999765       799999998765321100                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhh------cchhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQ------GHERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~------~~~~~~~~la~~~  440 (581)
                         .++..|...+   .... .+++  +++.+..  .....++||||++| ++.+++....      ........++..+
T Consensus        65 ---~~~~~e~~~~---~~~~-~h~n--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i  134 (327)
T 3aln_A           65 ---KQLLMDLDVV---MRSS-DCPY--IVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLAT  134 (327)
T ss_dssp             ---HHHHHHHHHH---HSSC-CCTT--BCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHH---HHcC-CCCc--EeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHH
Confidence               0111222111   1111 2222  2333322  23445799999998 7777665311      1112223344444


Q ss_pred             HHHHHHHhhhC-CeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          441 THALLKMLLVD-NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       441 i~a~l~~L~~~-G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      +.+ +..||.. |++|+|+||.||+++       .+|      .++|+|||++..+........      ......+.+.
T Consensus       135 ~~~-l~~lH~~~~ivH~dlkp~NIll~-------~~~------~~kl~Dfg~~~~~~~~~~~~~------~~gt~~y~aP  194 (327)
T 3aln_A          135 VKA-LNHLKENLKIIHRDIKPSNILLD-------RSG------NIKLCDFGISGQLVDSIAKTR------DAGCRPYMAP  194 (327)
T ss_dssp             HHH-HHHHHHHHSCCCSCCCGGGEEEE-------TTT------EEEECCCSSSCC-------------------------
T ss_pred             HHH-HHHHhccCCEeECCCCHHHEEEc-------CCC------CEEEccCCCceeccccccccc------CCCCccccCc
Confidence            443 7788998 999999999999998       677      999999999987755432211      0122345666


Q ss_pred             HHHHh---hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLR---LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~---l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+..   -.......|.++|+..+.+++.+
T Consensus       195 E~~~~~~~~~~~~~~~Di~slG~il~~l~~g  225 (327)
T 3aln_A          195 ERIDPSASRQGYDVRSDVWSLGITLYELATG  225 (327)
T ss_dssp             -----------CCSHHHHHHHHHHHHHHHHS
T ss_pred             eeeccccCcCCCCchhhHHHHHHHHHHHHHC
Confidence            66532   22234466999999999998876

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.55  E-value=7.2e-15  Score=160.84  Aligned_cols=200  Identities=17%  Similarity=0.133  Sum_probs=118.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+........-                    +...-....+...   
T Consensus        41 ~~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~~--------------------~~~~~~~~~~~~~---   90 (504)
T 3q5i_A           41 VRKLGSGAYGEVLLCKEKNG-------HSEKAIKVIKKSQFDKG--------------------RYSDDNKNIEKFH---   90 (504)
T ss_dssp             EEEEEC--CEEEEEEEETTT-------CCEEEEEEEEC------------------------------------CTH---
T ss_pred             EeEecccCCeEEEEEEECCC-------CcEEEEEEEEhhhcccc--------------------cccccchhhHHHH---
Confidence            67899999999999999875       79999999875421100                    0000000001111   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|...+.++     ++++  +++.+.-  .....++||||++|++|.+++..... .......++..++.+ +
T Consensus        91 ---~~~~~E~~~l~~l-----~hpn--iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~-l  159 (504)
T 3q5i_A           91 ---EEIYNEISLLKSL-----DHPN--IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG-I  159 (504)
T ss_dssp             ---HHHHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--CCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence               1234455444433     1333  3333322  23445899999999999988754322 122223445454444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.|||+.       .++   ....++|+|||++..++......      .....-.+.++|.+.  
T Consensus       160 ~~lH~~~ivH~Dlkp~Nil~~-------~~~---~~~~~kl~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE~~~--  221 (504)
T 3q5i_A          160 CYLHKHNIVHRDIKPENILLE-------NKN---SLLNIKIVDFGLSSFFSKDYKLR------DRLGTAYYIAPEVLK--  221 (504)
T ss_dssp             HHHHHTTEECSCCSGGGEEES-------STT---CCSSEEECCCTTCEECCTTSCBC------CCCSCTTTCCHHHHT--
T ss_pred             HHHHHCCeEeCCCcHHHEEEe-------cCC---CCccEEEEECCCCEEcCCCCccc------cccCCcCCCCHHHhc--
Confidence            889999999999999999998       332   11269999999998765432110      001122455666543  


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.+....|.|+++..+.+++.+
T Consensus       222 ~~~~~~~DiwslG~il~~ll~g  243 (504)
T 3q5i_A          222 KKYNEKCDVWSCGVIMYILLCG  243 (504)
T ss_dssp             TCBCTHHHHHHHHHHHHHHHHS
T ss_pred             cCCCchHHHHHHHHHHHHHHhC
Confidence            3455567899999999988876

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.55  E-value=6.3e-15  Score=148.08  Aligned_cols=194  Identities=14%  Similarity=0.110  Sum_probs=113.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+........                                     
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~-------------------------------------   49 (296)
T 3uzp_A           14 GRKIGSGSFGDIYLGTDIAA-------GEEVAIKLECVKTKHP-------------------------------------   49 (296)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------TEEEEEEEEESCSSCC-------------------------------------
T ss_pred             EEEEccCCCeEEEEEEEcCC-------CcEEEEEEecCCcchh-------------------------------------
Confidence            57899999999999998764       7999999876542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                          ++.+|...+.++.    ....+..-..+.......++||||+ |.+|.+++.....  .......++..++.+ +.
T Consensus        50 ----~~~~e~~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~-l~  119 (296)
T 3uzp_A           50 ----QLHIESKIYKMMQ----GGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISR-IE  119 (296)
T ss_dssp             ----HHHHHHHHHHHHT----TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHH-HH
T ss_pred             ----HHHHHHHHHHHhh----cCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHH-HH
Confidence                1233444444432    1122221111222234458999999 8999999863222  122223445454444 78


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH--HHHHHHhhcHHHHHHHHHh
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE--FFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~--l~~Al~~~D~~~~~e~ll~  524 (581)
                      .||..|++|+|+||.||+++..+    .++      .++|+|||++..+..........  ........-.+.++|.+..
T Consensus       120 ~lH~~~ivH~dlkp~NIl~~~~~----~~~------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 3uzp_A          120 YIHSKNFIHRDVKPDNFLMGLGK----KGN------LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             HHHHTTEECSCCCGGGEEECCGG----GTT------CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT
T ss_pred             HHHhCCeeeCCCCHHHeEEecCC----CCC------eEEEeeCCCcccccccccccccccccccccccccccCChhhhcC
Confidence            89999999999999999995211    344      89999999988654432100000  0000000112334444322


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .......|.++|+..+.+++.+
T Consensus       190 -~~~~~~~Di~slG~il~~l~~g  211 (296)
T 3uzp_A          190 -IEQSRRDDLESLGYVLMYFNLG  211 (296)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             -CCCCcchhhHHHHHHHHHHHhC
Confidence             2223345777777777777665

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.55  E-value=1.6e-14  Score=147.28  Aligned_cols=192  Identities=13%  Similarity=0.039  Sum_probs=106.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+..+.-...                                     
T Consensus        33 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~-------------------------------------   68 (337)
T 3ll6_A           33 RRVLAEGGFAFVYEAQDVGS-------GREYALKRLLSNEEEK-------------------------------------   68 (337)
T ss_dssp             EEEEECCSSEEEEEEEETTT-------CCEEEEEEEEESSHHH-------------------------------------
T ss_pred             EEEEccCCceEEEEEEECCC-------CcEEEEEEecCCchHH-------------------------------------
Confidence            57899999999999998764       7999999875441110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc----------cCCCCcEEEEeccCCccHHHHHHhhhc----chhhHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY----------PLVHPAVLVETYEQGECVSRYVDELQG----HERLKS  434 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~----------~l~t~~VLVmEyi~G~~L~~~l~~~~~----~~~~~~  434 (581)
                        .-.+.+|...+.++.    +++++.  +.+.          .....-++||||++| +|.+++.....    ......
T Consensus        69 --~~~~~~e~~~l~~l~----~h~~iv--~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~~  139 (337)
T 3ll6_A           69 --NRAIIQEVCFMKKLS----GHPNIV--QFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVL  139 (337)
T ss_dssp             --HHHHHHHHHHHHHHT----TSTTBC--CEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHHH
T ss_pred             --HHHHHHHHHHHHHhc----cCCChh--hccccccccccccccCCceEEEEEEecCC-CHHHHHHHhhccCCCCHHHHH
Confidence              012334555554442    223221  2211          112234799999986 77777654211    112223


Q ss_pred             HHHHHHHHHHHHHhhhCC--eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH-------
Q 008021          435 ALAHIGTHALLKMLLVDN--FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE-------  505 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~~G--~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~-------  505 (581)
                      .++..++.+ +..||..|  ++|+|+||.|||++       .++      +++|+|||++..++.........       
T Consensus       140 ~i~~qi~~~-l~~LH~~~~~ivH~Dikp~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~  205 (337)
T 3ll6_A          140 KIFYQTCRA-VQHMHRQKPPIIHRDLKVENLLLS-------NQG------TIKLCDFGSATTISHYPDYSWSAQRRALVE  205 (337)
T ss_dssp             HHHHHHHHH-HHHHHTSSSCCBCCCCCGGGCEEC-------TTS------CEEBCCCTTCBCCSSCC-------------
T ss_pred             HHHHHHHHH-HHHHHhCCCCEEEccCCcccEEEC-------CCC------CEEEecCccceeccccCcccccccccccch
Confidence            344444444 88899999  99999999999998       667      89999999998775432211100       


Q ss_pred             HHHHHHhhcHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHhhhH
Q 008021          506 FFKAVARRDGRTAAECTLRL--SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       506 l~~Al~~~D~~~~~e~ll~l--~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      --........+.++|.+...  .......|.++|+..+.+++.+
T Consensus       206 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g  249 (337)
T 3ll6_A          206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR  249 (337)
T ss_dssp             ------------------CCTTSCSSHHHHHHHHHHHHHHHHHS
T ss_pred             hhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhC
Confidence            00011112234555554211  1122245777777777776654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.55  E-value=2e-15  Score=156.70  Aligned_cols=194  Identities=18%  Similarity=0.076  Sum_probs=118.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.++.....-                 ........           
T Consensus        29 ~~~lG~G~~g~Vy~a~~~~~-------~~~vavK~~~~~~~~~~-----------------~~~~~~~~-----------   73 (335)
T 3dls_A           29 MSPLGSGAFGFVWTAVDKEK-------NKEVVVKFIKKEKVLED-----------------CWIEDPKL-----------   73 (335)
T ss_dssp             EEECSSSSSCSEEEEEETTT-------TEEEEEEEEESTTSCTT-----------------SEEEETTT-----------
T ss_pred             EeEEEecCCEEEEEEEECCC-------CcEEEEEEEehhhcccc-----------------cccchHHH-----------
Confidence            57999999999999998765       79999999876521000                 00000000           


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCC-ccHHHHHHhhhc-chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQG-ECVSRYVDELQG-HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G-~~L~~~l~~~~~-~~~~~~~la~~~i~a~  444 (581)
                         -.+.+|+..+.++     .+++  +++.+.  ......++||||+.+ .+|.+++..... .......++..++.+ 
T Consensus        74 ---~~~~~E~~~l~~l-----~h~~--Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~-  142 (335)
T 3dls_A           74 ---GKVTLEIAILSRV-----EHAN--IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA-  142 (335)
T ss_dssp             ---EEEEHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHH-
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--EeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHH-
Confidence               0112344444322     1222  233332  223445799998855 499998865321 122223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||.|||++       .+|      .++|+|||++..+.......      .......+.++|.+..
T Consensus       143 L~~LH~~~ivH~Dlkp~NIll~-------~~~------~~kL~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE~~~~  203 (335)
T 3dls_A          143 VGYLRLKDIIHRDIKDENIVIA-------EDF------TIKLIDFGSAAYLERGKLFY------TFCGTIEYCAPEVLMG  203 (335)
T ss_dssp             HHHHHHTTEECSCCSGGGEEEC-------TTS------CEEECCCTTCEECCTTCCBC------EECSCGGGCCHHHHTT
T ss_pred             HHHHHhCCeEEeccCHHHEEEc-------CCC------cEEEeecccceECCCCCcee------ccCCCccccChhhhcC
Confidence            8889999999999999999998       667      89999999998765432100      0011224556666544


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ........|.++|+..+.+++.+
T Consensus       204 ~~~~~~~~DiwslG~il~el~~g  226 (335)
T 3dls_A          204 NPYRGPELEMWSLGVTLYTLVFE  226 (335)
T ss_dssp             CCBCSHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCcccchhHHHHHHHHHhC
Confidence            33223345888888888888765

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.55  E-value=2.4e-14  Score=142.85  Aligned_cols=188  Identities=15%  Similarity=0.099  Sum_probs=119.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......                           +.        
T Consensus        11 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~---------------------------~~--------   48 (279)
T 2w5a_A           11 LYTIGTGSYGRCQKIRRKSD-------GKILVWKELDYGSMTE---------------------------AE--------   48 (279)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------CCEEEEEEEECTTCCH---------------------------HH--------
T ss_pred             ehhccCCCCcEEEEEEECCC-------CcEEEEEEEEcccCCH---------------------------HH--------
Confidence            57899999999999999864       7999999977542110                           00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc----CCCCcEEEEeccCCccHHHHHHhhhc-----chhhHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP----LVHPAVLVETYEQGECVSRYVDELQG-----HERLKSALAHI  439 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~----l~t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~la~~  439 (581)
                        .-.+.+|.+.+.++.     +++  +++.+..    .....++||||++|.+|.+++.....     .......++..
T Consensus        49 --~~~~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~  119 (279)
T 2w5a_A           49 --KQMLVSEVNLLRELK-----HPN--IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ  119 (279)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTT--BCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhcC-----CCC--CCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHH
Confidence              012344555554431     222  2233321    12345899999999999999865321     11222334444


Q ss_pred             HHHHHHHHhhhCC-----eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          440 GTHALLKMLLVDN-----FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       440 ~i~a~l~~L~~~G-----~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      ++.+ +..+|..|     ++|+|++|.||+++       .++      .++|+|||++..+.......     .......
T Consensus       120 i~~~-l~~lH~~~~~~~~ivH~dl~p~NIl~~-------~~~------~~kl~dfg~~~~~~~~~~~~-----~~~~~~~  180 (279)
T 2w5a_A          120 LTLA-LKECHRRSDGGHTVLHRDLKPANVFLD-------GKQ------NVKLGDFGLARILNHDTSFA-----KTFVGTP  180 (279)
T ss_dssp             HHHH-HHHHHHHC------CCCCCSGGGEEEC-------SSS------CEEECCCCHHHHC---CHHH-----HHHHSCC
T ss_pred             HHHH-HHHHhcccCCCCeeEEeccchhhEEEc-------CCC------CEEEecCchheeeccccccc-----cccCCCc
Confidence            4443 78899988     99999999999998       667      89999999988775543211     1112233


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.++|.+.. .......|.++|+..+.+++.+
T Consensus       181 ~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g  212 (279)
T 2w5a_A          181 YYMSPEQMNR-MSYNEKSDIWSLGCLLYELCAL  212 (279)
T ss_dssp             TTCCHHHHHC-C-CCHHHHHHHHHHHHHHHHHS
T ss_pred             cccChHHhcc-CCCCchhhHHHHHHHHHHHHHC
Confidence            4556666543 2333456889999998888876

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.54  E-value=1.6e-15  Score=157.35  Aligned_cols=215  Identities=13%  Similarity=0.057  Sum_probs=130.3

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      ...|+ .+.||+|++|.||+|+.+.+       |+.||||+........                      ..       
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~----------------------~~-------   59 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKT-------GQKVALKKVLMENEKE----------------------GF-------   59 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTT-------CCEEEEEECCCSSCSS----------------------SS-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCC-------CCEEEEEEEecccccc----------------------cc-------
Confidence            34454 58899999999999999765       7999999875542110                      00       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc----------CCCCcEEEEeccCCccHHHHHHhhhc--ch
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP----------LVHPAVLVETYEQGECVSRYVDELQG--HE  430 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~----------l~t~~VLVmEyi~G~~L~~~l~~~~~--~~  430 (581)
                              ..++.+|.+.+.++.     ++++  ++.+.-          ....-++||||++| ++.+.+.....  ..
T Consensus        60 --------~~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~  123 (351)
T 3mi9_A           60 --------PITALREIKILQLLK-----HENV--VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTL  123 (351)
T ss_dssp             --------CHHHHHHHHHHHHCC-----CTTB--CCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCH
T ss_pred             --------hHHHHHHHHHHHhcc-----CCCc--ccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCH
Confidence                    011233444444331     2221  122111          12235799999998 55554433211  11


Q ss_pred             hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          431 RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       431 ~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      .....++..++.+ +..||..|++|+|+||+|||++       .+|      .++|+|||++..++......... ....
T Consensus       124 ~~~~~i~~qi~~~-l~~LH~~~ivH~Dlkp~NIl~~-------~~~------~~kl~Dfg~a~~~~~~~~~~~~~-~~~~  188 (351)
T 3mi9_A          124 SEIKRVMQMLLNG-LYYIHRNKILHRDMKAANVLIT-------RDG------VLKLADFGLARAFSLAKNSQPNR-YTNR  188 (351)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECCCCSSSSCCC-CCSS
T ss_pred             HHHHHHHHHHHHH-HHHHHHCCeeCCCCCHHHEEEc-------CCC------CEEEccchhcccccccccccccc-cCCc
Confidence            2223444444444 8889999999999999999998       677      89999999987654211000000 0000


Q ss_pred             HhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHHH
Q 008021          511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNYL  565 (581)
Q Consensus       511 ~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~l  565 (581)
                      .....+.++|.+..........|.++|+..+.+++.+.  +......+.+..+.++.
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~  245 (351)
T 3mi9_A          189 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC  245 (351)
T ss_dssp             CSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             ccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            11234677787765444556789999999999999873  45555556665555543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.54  E-value=1.4e-14  Score=163.67  Aligned_cols=192  Identities=17%  Similarity=0.163  Sum_probs=119.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|.+...     ..++.||||+.+.+....                           +.        
T Consensus       374 ~~~LG~G~fG~Vy~~~~~~~-----~~~~~vAvK~~~~~~~~~---------------------------~~--------  413 (635)
T 4fl3_A          374 DKELGSGNFGTVKKGYYQMK-----KVVKTVAVKILKNEANDP---------------------------AL--------  413 (635)
T ss_dssp             EEEEEECSSEEEEEEEEECS-----SCEEEEEEEEECGGGGCG---------------------------GG--------
T ss_pred             CCEeccCCCEEEEEEEEcCC-----CcceEEEEEEeccccCCH---------------------------HH--------
Confidence            45799999999999976532     115899999986542210                           00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                        .-++.+|++.+.++.     ++++  .+.+.-. ....+|||||++|++|.+++..... .......++..++.+ +.
T Consensus       414 --~~~~~~E~~il~~l~-----hpnI--v~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~-L~  483 (635)
T 4fl3_A          414 --KDELLAEANVMQQLD-----NPYI--VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG-MK  483 (635)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTB--CCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHH-HH
T ss_pred             --HHHHHHHHHHHHhCC-----CCCE--eeEEEEEecCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHH-HH
Confidence              012345665555442     2222  2222211 2345799999999999999865321 112223344444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+||||.|||++       .++      .++|+|||++..+.........  .......-.+.+.|.+.. .
T Consensus       484 yLH~~~iiHrDLkp~NILl~-------~~~------~~kL~DFGla~~~~~~~~~~~~--~~~~~~t~~y~APE~~~~-~  547 (635)
T 4fl3_A          484 YLEESNFVHRDLAARNVLLV-------TQH------YAKISDFGLSKALRADENYYKA--QTHGKWPVKWYAPECINY-Y  547 (635)
T ss_dssp             HHHHTTCCCSCCSGGGEEEE-------ETT------EEEECCTTHHHHTTC---------------CGGGSCHHHHHH-C
T ss_pred             HHHHCCEeCCCCChHhEEEe-------CCC------CEEEEEcCCccccccCcccccc--ccCCCCceeeeChhhhcC-C
Confidence            89999999999999999999       667      8999999999877543321100  000000112556676643 3


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 008021          527 KQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ......|.|+|+..+.++++
T Consensus       548 ~~~~~sDvwSlGv~l~ellt  567 (635)
T 4fl3_A          548 KFSSKSDVWSFGVLMWEAFS  567 (635)
T ss_dssp             CCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHHHHHHh
Confidence            44456799999999999886

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.54  E-value=1.8e-14  Score=146.89  Aligned_cols=206  Identities=18%  Similarity=0.121  Sum_probs=125.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  +    |+.||||+.++.....                   .. .              
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~--~----~~~vavK~~~~~~~~~-------------------~~-~--------------   55 (326)
T 1blx_A           16 VAEIGEGAYGKVFKARDLKN--G----GRFVALKRVRVQTGEE-------------------GM-P--------------   55 (326)
T ss_dssp             EEEEEEETTEEEEEEEETTT--T----TEEEEEEEEEEEBCTT-------------------SC-B--------------
T ss_pred             eeeecccccEEEEEEEecCC--C----CEEEEEEEeccCcccc-------------------cC-C--------------
Confidence            57899999999999998531  1    6999999876532110                   00 0              


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-------CCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-------LVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAH  438 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-------l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~  438 (581)
                         ..+.+|...+.++.. + .+++  +++.+.-       .....++||||++| +|.+++.....   .......++.
T Consensus        56 ---~~~~~e~~~l~~l~~-~-~h~~--i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~  127 (326)
T 1blx_A           56 ---LSTIREVAVLRHLET-F-EHPN--VVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMF  127 (326)
T ss_dssp             ---CTHHHHHHHHHHHHH-T-CCTT--BCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHH
T ss_pred             ---chhhHHHHHHHhhhc-c-CCCC--eEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHH
Confidence               011223333333321 1 1222  2222211       22345799999997 89888765321   1122233444


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ +..||..|++|+|+||+||+++       .+|      .++|+|||++..++......      .......+.+
T Consensus       128 qi~~~-l~~lH~~gi~H~dlkp~Nili~-------~~~------~~kl~Dfg~~~~~~~~~~~~------~~~~~~~y~a  187 (326)
T 1blx_A          128 QLLRG-LDFLHSHRVVHRDLKPQNILVT-------SSG------QIKLADFGLARIYSFQMALT------SVVVTLWYRA  187 (326)
T ss_dssp             HHHHH-HHHHHHTTCCCCCCCGGGEEEC-------TTC------CEEECSCCSCCCCCGGGGGC------CCCCCCTTCC
T ss_pred             HHHHH-HHHHHHCCceeccCCHHHeEEc-------CCC------CEEEecCcccccccCCCCcc------ccccccceeC
Confidence            44443 8889999999999999999998       667      89999999998776543110      0111234556


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHH
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSN  563 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~  563 (581)
                      +|.+.. .......|.++|+..+.+++.+.  +......+.+..+..
T Consensus       188 PE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~  233 (326)
T 1blx_A          188 PEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD  233 (326)
T ss_dssp             HHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             HHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            666643 33445679999999999998773  444444444444443

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.54  E-value=1.4e-14  Score=151.10  Aligned_cols=146  Identities=20%  Similarity=0.229  Sum_probs=94.2

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      +.|+ .+.||+|++|.||+|+.+.+       |+.||||+....... .                               
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~-~-------------------------------   62 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKAT-------NMEFAVKIIDKSKRD-P-------------------------------   62 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEEETTTCC-C-------------------------------
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCC-------CCEEEEEEEEcccCC-h-------------------------------
Confidence            3344 57899999999999999875       799999998654211 0                               


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                                 .+|...+.++    ..++++  ++.+.  .....-++||||++|++|.+++..... .......++..+
T Consensus        63 -----------~~E~~~l~~~----~~hp~i--v~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi  125 (342)
T 2qr7_A           63 -----------TEEIEILLRY----GQHPNI--ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI  125 (342)
T ss_dssp             -----------HHHHHHHHHH----TTSTTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHH
T ss_pred             -----------HHHHHHHHHh----cCCCCc--CeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHH
Confidence                       1122222222    123332  22222  223345799999999999998754221 112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      +.+ +..||..|++|+|+||+|||+...+.   ..+      .++|+|||++..+.
T Consensus       126 ~~a-l~~lH~~givHrDlkp~NIl~~~~~~---~~~------~~kl~Dfg~a~~~~  171 (342)
T 2qr7_A          126 TKT-VEYLHAQGVVHRDLKPSNILYVDESG---NPE------SIRICDFGFAKQLR  171 (342)
T ss_dssp             HHH-HHHHHHTTEECSCCCGGGEEESSSSC---SGG------GEEECCCTTCEECB
T ss_pred             HHH-HHHHHHCCcEeccCCHHHEEEecCCC---CcC------eEEEEECCCcccCc
Confidence            444 88899999999999999999861110   223      69999999987653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=6.8e-13  Score=133.34  Aligned_cols=143  Identities=21%  Similarity=0.308  Sum_probs=94.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ++.||+|++|+||+|+.+.+ .    .++.||||+.++.....                            ..       
T Consensus        15 ~~~lg~G~~g~Vy~~~~~~~-~----~~~~vavK~~~~~~~~~----------------------------~~-------   54 (287)
T 1u59_A           15 DIELGCGNFGSVRQGVYRMR-K----KQIDVAIKVLKQGTEKA----------------------------DT-------   54 (287)
T ss_dssp             EEEEECCTTEEEEEEEEC--------CCEEEEEEEECSSCCHH----------------------------HH-------
T ss_pred             hccccccCceeEEEeEeccC-C----CcceEEEEecCCccchh----------------------------HH-------
Confidence            45899999999999987532 1    26899999987652110                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                         -++.+|.+.+.++     .+++  +++.+... ....++||||++|.+|.+++.....  .......++..++.+ +
T Consensus        55 ---~~~~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~-l  123 (287)
T 1u59_A           55 ---EEMMREAQIMHQL-----DNPY--IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG-M  123 (287)
T ss_dssp             ---HHHHHHHHHHHHC-----CCTT--BCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--EeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHH-H
Confidence               1234455555443     1222  22332222 2346899999999999998853211  112223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ..||..|++|+|+||+||+++       .++      .++|+|||++..+
T Consensus       124 ~~lH~~~i~H~dlkp~Nili~-------~~~------~~kl~Dfg~~~~~  160 (287)
T 1u59_A          124 KYLEEKNFVHRDLAARNVLLV-------NRH------YAKISDFGLSKAL  160 (287)
T ss_dssp             HHHHHTTEECCCCSGGGEEEE-------ETT------EEEECCCTTCEEC
T ss_pred             HHHHHCCEeeCCCchheEEEc-------CCC------CEEECcccceeee
Confidence            889999999999999999998       667      8999999998654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.54  E-value=2.2e-14  Score=144.44  Aligned_cols=75  Identities=17%  Similarity=0.193  Sum_probs=58.4

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhh--------hCCeEecCCCCCCEEEeeccccccccccc
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL--------VDNFIHADMHPGNILVRVAQKKSSQKRLF  478 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~--------~~G~~H~DlHPGNILV~~~~~~~~~~g~~  478 (581)
                      .++||||++|++|.++++...........++..++.+ +..||        ..|++|+|+||+|||++       .++  
T Consensus        81 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~-l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~-------~~~--  150 (301)
T 3q4u_A           81 LWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG-LAHLHIEIFGTQGKPAIAHRDLKSKNILVK-------KNG--  150 (301)
T ss_dssp             EEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHH-HHHHHSCBCSTTCBCEEECSCCCGGGEEEC-------TTS--
T ss_pred             eEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHH-HHHHHHhhhhccCCCCeecCCCChHhEEEc-------CCC--
Confidence            4799999999999999864332223333455554444 88899        99999999999999998       667  


Q ss_pred             CCCCeEEEEeccccccc
Q 008021          479 RSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       479 ~~~~~lvLiDFGl~~~L  495 (581)
                          .++|+|||++...
T Consensus       151 ----~~kl~Dfg~a~~~  163 (301)
T 3q4u_A          151 ----QCCIADLGLAVMH  163 (301)
T ss_dssp             ----CEEECCCTTCEEE
T ss_pred             ----CEEEeeCCCeeec
Confidence                8999999998644

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=5.4e-14  Score=144.95  Aligned_cols=150  Identities=18%  Similarity=0.177  Sum_probs=96.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....  +....++.||||+.++.....                                     
T Consensus        50 ~~~lG~G~~g~V~~~~~~~~--~~~~~~~~vavK~~~~~~~~~-------------------------------------   90 (344)
T 1rjb_A           50 GKVLGSGAFGKVMNATAYGI--SKTGVSIQVAVKMLKEKADSS-------------------------------------   90 (344)
T ss_dssp             EEEEEECSSEEEEEEEEESC--SSSSCEEEEEEEEECC------------------------------------------
T ss_pred             eeeecCCCCceeEEeeeecc--ccCCcceEEEEEecccccCHH-------------------------------------
Confidence            57899999999999997421  111236899999987542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--------------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--------------------  428 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--------------------  428 (581)
                       ..-.+.+|...+.++.    .++++.-..-+.......++||||++|++|.+++.....                    
T Consensus        91 -~~~~~~~E~~~l~~l~----~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  165 (344)
T 1rjb_A           91 -EREALMSELKMMTQLG----SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED  165 (344)
T ss_dssp             --CHHHHHHHHHHHHHC----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC------------------
T ss_pred             -HHHHHHHHHHHHHhhc----CCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccc
Confidence             0012344555555441    233332111122234556899999999999999865321                    


Q ss_pred             ----chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          429 ----HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       429 ----~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                          .......++..++.+ +..||..|++|+|+||.||+++       .++      .++|+|||++..+.
T Consensus       166 ~~~l~~~~~~~i~~qi~~a-L~~LH~~~ivH~Dikp~NIll~-------~~~------~~kL~Dfg~~~~~~  223 (344)
T 1rjb_A          166 LNVLTFEDLLCFAYQVAKG-MEFLEFKSCVHRDLAARNVLVT-------HGK------VVKICDFGLARDIM  223 (344)
T ss_dssp             ---CCHHHHHHHHHHHHHH-HHHHHHTTEEETTCSGGGEEEE-------TTT------EEEECCCGGGSCGG
T ss_pred             cccCCHHHHHHHHHHHHHH-HHHHHhCCcccCCCChhhEEEc-------CCC------cEEeCCCccCcccc
Confidence                111112344444443 7889999999999999999999       677      89999999987553

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.54  E-value=5.9e-14  Score=143.98  Aligned_cols=147  Identities=16%  Similarity=0.192  Sum_probs=98.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  |+...++.||||+.++.....                                     
T Consensus        51 ~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~vavK~~~~~~~~~-------------------------------------   91 (333)
T 2i1m_A           51 GKTLGAGAFGKVVEATAFGL--GKEDAVLKVAVKMLKSTAHAD-------------------------------------   91 (333)
T ss_dssp             EEEEEECSSEEEEEEEETTC--SSSCCCCEEEEEEECTTCCHH-------------------------------------
T ss_pred             eeEeccCCCcceEEEEecCC--CcccchhHHHHHhcccccChH-------------------------------------
Confidence            57899999999999998753  322334689999987652110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhc---------------chh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQG---------------HER  431 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~---------------~~~  431 (581)
                       ..-.+.+|.+.+.++.    .++++  ++.+  .......++||||++|++|.+++.....               ...
T Consensus        92 -~~~~~~~E~~~l~~l~----~h~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  164 (333)
T 2i1m_A           92 -EKEALMSELKIMSHLG----QHENI--VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR  164 (333)
T ss_dssp             -HHHHHHHHHHHHHHHC----CCTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHH
T ss_pred             -HHHHHHHHHHHHHhhc----CCCCe--eeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHH
Confidence             0112345655555441    23332  2332  2233456899999999999999865321               111


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ....++..++.+ +..||..|++|+|+||+||+++       .++      .++|+|||++..+
T Consensus       165 ~~~~~~~qi~~~-l~~lH~~~ivH~Dlkp~NIl~~-------~~~------~~kl~Dfg~~~~~  214 (333)
T 2i1m_A          165 DLLHFSSQVAQG-MAFLASKNCIHRDVAARNVLLT-------NGH------VAKIGDFGLARDI  214 (333)
T ss_dssp             HHHHHHHHHHHH-HHHHHHTTEECSCCSGGGCEEE-------GGG------EEEBCCCGGGCCG
T ss_pred             HHHHHHHHHHHH-HHHHhcCCcccCCcccceEEEC-------CCC------eEEECcccccccc
Confidence            122344444443 7889999999999999999998       677      8999999998755

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.54  E-value=7.2e-15  Score=160.46  Aligned_cols=189  Identities=15%  Similarity=0.118  Sum_probs=115.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......                       -.            
T Consensus        42 ~~~lG~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~~~~-----------------------~~------------   79 (494)
T 3lij_A           42 VKKLGSGAYGEVLLCRDKVT-------HVERAIKIIRKTSVST-----------------------SS------------   79 (494)
T ss_dssp             EEEEECC---EEEEEEETTT-------CCEEEEEEEEC----------------------------CT------------
T ss_pred             eeEEecCCCEEEEEEEECCC-------CcEEEEEEEeccccCc-----------------------hH------------
Confidence            57899999999999999865       7999999976541100                       00            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|...+.++     .+++  +++.+.  ......++||||++|++|.+++..... .......++..++.+ +
T Consensus        80 --~~~~~~E~~~l~~l-----~hpn--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~-l  149 (494)
T 3lij_A           80 --NSKLLEEVAVLKLL-----DHPN--IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSG-V  149 (494)
T ss_dssp             --THHHHHHHHHHTTC-----CCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--CCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH-H
Confidence              01123454444322     2233  223332  223445899999999999887754221 122223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.|||++...    .++      .++|+|||++..+.......      .....-++.++|.+.  
T Consensus       150 ~~lH~~~ivH~Dlkp~Nil~~~~~----~~~------~~kl~DfG~a~~~~~~~~~~------~~~gt~~y~aPE~l~--  211 (494)
T 3lij_A          150 TYLHKHNIVHRDLKPENLLLESKE----KDA------LIKIVDFGLSAVFENQKKMK------ERLGTAYYIAPEVLR--  211 (494)
T ss_dssp             HHHHHTTEECSCCSGGGEEESCSS----TTC------CEEECCCTTCEECBTTBCBC------CCCSCTTTCCHHHHT--
T ss_pred             HHHHHCCceeccCChhhEEEeCCC----CCC------cEEEEECCCCeECCCCcccc------ccCCCcCeeCHHHHc--
Confidence            889999999999999999997111    223      69999999987665432110      001223456666543  


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.+....|.|+++..+.+++.+
T Consensus       212 ~~~~~~~DiwslG~il~~ll~g  233 (494)
T 3lij_A          212 KKYDEKCDVWSIGVILFILLAG  233 (494)
T ss_dssp             TCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCchhHHHHHHHHHHHHhC
Confidence            3455567899999999888876

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.54  E-value=6.6e-14  Score=141.76  Aligned_cols=190  Identities=15%  Similarity=0.164  Sum_probs=113.0

Q ss_pred             CceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHH
Q 008021          288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF  367 (581)
Q Consensus       288 d~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~  367 (581)
                      ..+.||+|++|.||+|+..         ++.||||+..+.....                         -.+..      
T Consensus        35 ~~~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~-------------------------~~~~~------   74 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGYVN---------NTTVAVKKLAAMVDIT-------------------------TEELK------   74 (307)
T ss_dssp             TCCEEEECSSEEEEEEESS---------SCEEEEEEECCCTTSC-------------------------TTTHH------
T ss_pred             cCCccccCCCeEEEEEEEC---------CceEEEEEEecccCcc-------------------------hHHHH------
Confidence            3479999999999999873         5899999987542110                         00111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc----hhhHHHHHHHHH
Q 008021          368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH----ERLKSALAHIGT  441 (581)
Q Consensus       368 l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~----~~~~~~la~~~i  441 (581)
                          -.+.+|.+.+.++.     +++  +++.+.  ......++||||++|.+|.+++......    ......++..++
T Consensus        75 ----~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~  143 (307)
T 2nru_A           75 ----QQFDQEIKVMAKCQ-----HEN--LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA  143 (307)
T ss_dssp             ----HHHHHHHHHHHHCC-----CTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHhcC-----CCC--eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence                12344555444431     233  233332  2234568999999999999988643221    112233444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..||..|++|+|+||.||+++       .++      .++|+|||++............   ........+.++|.
T Consensus       144 ~~-l~~lH~~~i~H~dlkp~Nili~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~---~~~~g~~~y~aPE~  206 (307)
T 2nru_A          144 NG-INFLHENHHIHRDIKSANILLD-------EAF------TAKISDFGLARASEKFAQTVMT---SRIVGTTAYMAPEA  206 (307)
T ss_dssp             HH-HHHHHHTTEECSCCCGGGEEEC-------TTC------CEEECCCTTCEECCSCSSCEEC---SSCCSCGGGCCHHH
T ss_pred             HH-HHHHhcCCeecCCCCHHHEEEc-------CCC------cEEEeecccccccccccccccc---cccCCCcCcCChHH
Confidence            43 7889999999999999999998       667      8999999998755431100000   00001112334443


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.  +......|.++|+..+.+++.+
T Consensus       207 ~~--~~~~~~~Dv~slG~il~~l~~g  230 (307)
T 2nru_A          207 LR--GEITPKSDIYSFGVVLLEIITG  230 (307)
T ss_dssp             HT--TEECTHHHHHHHHHHHHHHHHC
T ss_pred             hc--CCCCccchhHHHHHHHHHHHHC
Confidence            32  2233445667777777666655

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.54  E-value=1.8e-15  Score=162.07  Aligned_cols=197  Identities=15%  Similarity=0.094  Sum_probs=116.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+..+.....                  ...+             ..
T Consensus       140 ~~~LG~G~~g~V~~a~~~~~-------~~~vavK~~~~~~~~~------------------~~~~-------------~~  181 (419)
T 3i6u_A          140 SKTLGSGACGEVKLAFERKT-------CKKVAIRIISKRKFAI------------------GSAR-------------EA  181 (419)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------CCEEEEEEEEGGGGTT------------------C------------------
T ss_pred             EeEEeeCCCeEEEEEEECCC-------CcEEEEEEEEechhcc------------------cccc-------------cc
Confidence            57899999999999999875       7999999976531100                  0000             00


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                      ....++.+|++.+.++     .++++  .+.+.-+ ....++||||++|.+|.+++..... .......++..++.+ +.
T Consensus       182 ~~~~~~~~E~~~l~~l-----~hpni--v~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~-l~  253 (419)
T 3i6u_A          182 DPALNVETEIEILKKL-----NHPCI--IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA-VQ  253 (419)
T ss_dssp             ---CCHHHHHHHHHHC-----CCTTB--CCCCEEEESSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHH-HH
T ss_pred             hhHHHHHHHHHHHHhC-----CCCCE--eeEEEEEecCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHH-HH
Confidence            0112345566665544     22332  2222212 2345899999999999887643221 112223344444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh-
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL-  525 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l-  525 (581)
                      .||..|++|+|+||.|||++...    .++      .++|+|||++..++......      .....-.+.++|.+... 
T Consensus       254 ~LH~~~ivHrDlkp~NIll~~~~----~~~------~~kl~DFG~a~~~~~~~~~~------~~~gt~~y~aPE~~~~~~  317 (419)
T 3i6u_A          254 YLHENGIIHRDLKPENVLLSSQE----EDC------LIKITDFGHSKILGETSLMR------TLCGTPTYLAPEVLVSVG  317 (419)
T ss_dssp             HHHHTTCCCSCCCGGGEEESSSS----SSC------CEEECCSSTTTSCC-----------------CTTCCTTTTC---
T ss_pred             HHHHCCccccCCChHhEEEecCC----Ccc------eEEEeecccceecCCCcccc------ccCCCCCccCceeeecCC
Confidence            89999999999999999997111    122      69999999998876543211      11223344555554322 


Q ss_pred             -cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 -SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 -~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       ..+....|.|+|+..+.+++.+
T Consensus       318 ~~~~~~~~DiwslG~il~~lltg  340 (419)
T 3i6u_A          318 TAGYNRAVDCWSLGVILFICLSG  340 (419)
T ss_dssp             -CTTHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCchhhhHhHHHHHHHHHHC
Confidence             2222356888999999888876

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.54  E-value=4.3e-14  Score=143.16  Aligned_cols=146  Identities=19%  Similarity=0.223  Sum_probs=95.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....  +....++.||||+.+++....                            ..       
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~--~~~~~~~~vavK~~~~~~~~~----------------------------~~-------   70 (314)
T 2ivs_A           28 GKTLGEGEFGKVVKATAFHL--KGRAGYTTVAVKMLKENASPS----------------------------EL-------   70 (314)
T ss_dssp             EEEEEECSSSEEEEEEEETG--GGCSSEEEEEEEECCTTCCHH----------------------------HH-------
T ss_pred             eeeecccCCeeEEEEEEecc--CcccCcceEEEEeccCCCCHH----------------------------HH-------
Confidence            57899999999999997431  001125899999987652210                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc------------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG------------------  428 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~------------------  428 (581)
                         -++.+|.+.+.++     .+++  +++.+.  ......++||||++|.+|.+++.....                  
T Consensus        71 ---~~~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  140 (314)
T 2ivs_A           71 ---RDLLSEFNVLKQV-----NHPH--VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD  140 (314)
T ss_dssp             ---HHHHHHHHHHTTC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC------------
T ss_pred             ---HHHHHHHHHHhhC-----CCCc--eeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccc
Confidence               1234455544333     1233  223322  233456899999999999999865321                  


Q ss_pred             -------chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          429 -------HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       429 -------~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                             .......++..++.+ +..||..|++|+|+||+||+++       .++      .++|+|||++..+
T Consensus       141 ~~~~~~~~~~~~~~i~~qi~~~-l~~lH~~~ivH~dikp~NIli~-------~~~------~~kl~Dfg~~~~~  200 (314)
T 2ivs_A          141 HPDERALTMGDLISFAWQISQG-MQYLAEMKLVHRDLAARNILVA-------EGR------KMKISDFGLSRDV  200 (314)
T ss_dssp             ----CEECHHHHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEE-------TTT------EEEECCCTTCEEC
T ss_pred             cccccCcCHHHHHHHHHHHHHH-HHHHHHCCCcccccchheEEEc-------CCC------CEEEccccccccc
Confidence                   111122344444443 8889999999999999999999       667      8999999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.53  E-value=7.5e-15  Score=159.85  Aligned_cols=193  Identities=15%  Similarity=0.155  Sum_probs=119.8

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      +.++ .+.||+|++|.||+|+.+.+       |+.||||+..+....                       ...       
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~-----------------------~~~-------   64 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRIT-------QQEYAVKVINKASAK-----------------------NKD-------   64 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTT-------CCEEEEEEEEHHHHB-----------------------CSC-------
T ss_pred             cceEEeEEEeecCCEEEEEEEECCC-------CCEEEEEEEeccccc-----------------------chH-------
Confidence            3344 67999999999999999865       799999996532100                       000       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                             .-.+.+|.+.+.++     .++++  ++.+.  ......++||||++|.+|.+++..... .......++..+
T Consensus        65 -------~~~~~~E~~~l~~l-----~hpni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi  130 (486)
T 3mwu_A           65 -------TSTILREVELLKKL-----DHPNI--MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV  130 (486)
T ss_dssp             -------HHHHHHHHHHHHHC-----CCTTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHhC-----CCCCc--CeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHH
Confidence                   01233455555443     23332  23332  223455899999999999887754221 122223444444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||.|||+....    .++      .++|+|||++..+.......      ......++.++|
T Consensus       131 ~~a-l~~lH~~~ivH~Dlkp~Nil~~~~~----~~~------~~kl~Dfg~a~~~~~~~~~~------~~~gt~~y~aPE  193 (486)
T 3mwu_A          131 FSG-ITYMHKHNIVHRDLKPENILLESKE----KDC------DIKIIDFGLSTCFQQNTKMK------DRIGTAYYIAPE  193 (486)
T ss_dssp             HHH-HHHHHHTTCCCSCCSGGGEEESSSS----TTC------CEEECSCSCTTTBCCC----------CCTTGGGGCCGG
T ss_pred             HHH-HHHHHHCCeEeccCchHHEEEecCC----CCC------CEEEEECCcCeECCCCCccC------CCcCCCCCCCHH
Confidence            444 8889999999999999999996111    234      79999999998765443211      111223445555


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.  +.+....|.|+++..+.+++.+
T Consensus       194 ~~~--~~~~~~~DiwslG~il~~ll~g  218 (486)
T 3mwu_A          194 VLR--GTYDEKCDVWSAGVILYILLSG  218 (486)
T ss_dssp             GGG--SCCCHHHHHHHHHHHHHHHHHS
T ss_pred             HhC--CCCCchhhHHHHHHHHHHHHhC
Confidence            542  3344456888888888888776

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.53  E-value=4.3e-14  Score=146.37  Aligned_cols=147  Identities=20%  Similarity=0.205  Sum_probs=96.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....  +....++.||||+.+.+....                                     
T Consensus        27 ~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~vavK~~~~~~~~~-------------------------------------   67 (359)
T 3vhe_A           27 GKPLGRGAFGQVIEADAFGI--DKTATCRTVAVKMLKEGATHS-------------------------------------   67 (359)
T ss_dssp             EEEEEECSSEEEEEEEEESS--SSTTCEEEEEEEEECTTCCHH-------------------------------------
T ss_pred             ceeecCCCCceEEEEEeccc--cccccceEEEEEEecCcCCHH-------------------------------------
Confidence            68999999999999996431  111236999999987642211                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc---cCCCCcEEEEeccCCccHHHHHHhhhc-----------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY---PLVHPAVLVETYEQGECVSRYVDELQG-----------------  428 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~---~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------  428 (581)
                       ..-.+.+|.+.+.++.    .++++  .+.+.   .-....++||||++|++|.+++.....                 
T Consensus        68 -~~~~~~~E~~~l~~l~----~hpni--v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~  140 (359)
T 3vhe_A           68 -EHRALMSELKILIHIG----HHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKD  140 (359)
T ss_dssp             -HHHHHHHHHHHHHHHC----CCTTB--CCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------
T ss_pred             -HHHHHHHHHHHHHhhc----CCcce--eeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccc
Confidence             0112345665555542    22332  22222   112336899999999999999865321                 


Q ss_pred             --------------------------------------------------chhhHHHHHHHHHHHHHHHhhhCCeEecCC
Q 008021          429 --------------------------------------------------HERLKSALAHIGTHALLKMLLVDNFIHADM  458 (581)
Q Consensus       429 --------------------------------------------------~~~~~~~la~~~i~a~l~~L~~~G~~H~Dl  458 (581)
                                                                        .......++..++.+ +..||..|++|+|+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~a-L~~LH~~~ivH~Di  219 (359)
T 3vhe_A          141 YVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG-MEFLASRKCIHRDL  219 (359)
T ss_dssp             -------------------------------------------CTTTTCBCHHHHHHHHHHHHHH-HHHHHHTTCCCSCC
T ss_pred             cccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHH-HHHHHHCCcccCCC
Confidence                                                              001112233333433 88899999999999


Q ss_pred             CCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       459 HPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ||.|||++       .++      .++|+|||++..+
T Consensus       220 kp~NIll~-------~~~------~~kl~Dfg~a~~~  243 (359)
T 3vhe_A          220 AARNILLS-------EKN------VVKICDFGLARDI  243 (359)
T ss_dssp             SGGGEEEC-------GGG------CEEECCCGGGSCT
T ss_pred             ChhhEEEc-------CCC------cEEEEeccceeee
Confidence            99999998       677      8999999998765

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.53  E-value=2.4e-14  Score=156.80  Aligned_cols=140  Identities=19%  Similarity=0.228  Sum_probs=97.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       ++.||||+.+++...                                      
T Consensus       225 ~~~lG~G~fg~Vy~~~~~~~-------~~~vavK~~~~~~~~--------------------------------------  259 (495)
T 1opk_A          225 KHKLGGGQYGEVYEGVWKKY-------SLTVAVKTLKEDTME--------------------------------------  259 (495)
T ss_dssp             EEESGGGTTSSEEEEEEGGG-------TEEEEEEECCSSSSC--------------------------------------
T ss_pred             eeEecCCCCeEEEEEEEcCC-------CeEEEEEEecCcccc--------------------------------------
Confidence            57899999999999999875       699999997754210                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~la~~~i~a  443 (581)
                        .-+|.+|++.+.++.     ++++  .+.+.  ......+|||||++|++|.+++......   ......++..++.+
T Consensus       260 --~~~~~~E~~~l~~l~-----hpni--v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~  330 (495)
T 1opk_A          260 --VEEFLKEAAVMKEIK-----HPNL--VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA  330 (495)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTB--CCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHH
T ss_pred             --hHHHHHHHHHHHhcC-----CCCE--eeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence              012345666555442     2332  22222  2234568999999999999998653221   11122344444443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                       +..||..|++|+||||.|||++       .++      .++|+|||++..+.
T Consensus       331 -L~~LH~~~ivHrDlkp~NIll~-------~~~------~~kl~DFG~a~~~~  369 (495)
T 1opk_A          331 -MEYLEKKNFIHRNLAARNCLVG-------ENH------LVKVADFGLSRLMT  369 (495)
T ss_dssp             -HHHHHHTTEECSCCSGGGEEEC-------GGG------CEEECCTTCEECCT
T ss_pred             -HHHHHhCCcccCCCChhhEEEC-------CCC------cEEEeecccceecc
Confidence             8889999999999999999998       677      89999999987654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.53  E-value=1.4e-14  Score=153.70  Aligned_cols=190  Identities=11%  Similarity=0.094  Sum_probs=117.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....        |+.||||+........                           +.        
T Consensus        61 ~~~LG~G~fg~Vy~~~~~~--------~~~vaiK~~~~~~~~~---------------------------~~--------   97 (390)
T 2zmd_A           61 LKQIGSGGSSKVFQVLNEK--------KQIYAIKYVNLEEADN---------------------------QT--------   97 (390)
T ss_dssp             EEEEECCSSEEEEEEECTT--------CCEEEEEEEECTTCCH---------------------------HH--------
T ss_pred             EEEEccCCCeEEEEEEcCC--------CCEEEEEEEecccccH---------------------------HH--------
Confidence            5789999999999999864        6899999976542110                           00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|...+.++...   .++  +.+.+  ......-+|||| +.|.+|.+++...... ......++..++.+ +
T Consensus        98 --~~~~~~Ei~~l~~l~~~---~~~--iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a-L  168 (390)
T 2zmd_A           98 --LDSYRNEIAYLNKLQQH---SDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEA-V  168 (390)
T ss_dssp             --HHHHHHHHHHHHHHTTT---CTT--BCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHHcccC---CCe--EEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence              01244566666555321   122  22333  222334589999 5678999988653221 11223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+||||.|||+.       . +      .++|+|||++..+.+.......   ....-.-.+.++|.+...
T Consensus       169 ~~lH~~~ivHrDlkp~NIll~-------~-~------~~kl~DFG~a~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~  231 (390)
T 2zmd_A          169 HTIHQHGIVHSDLKPANFLIV-------D-G------MLKLIDFGIANQMQPDTTSVVK---DSQVGAVNYMPPEAIKDM  231 (390)
T ss_dssp             HHHHTTTCCCCCCCGGGEEES-------S-S------CEEECCCSSSCCC------------CCSCCCGGGCCHHHHHCC
T ss_pred             HHHHHCCeeecCCCHHHEEEE-------C-C------eEEEEecCccccccCCCccccC---CCCCcCCCccChHHhhhc
Confidence            889999999999999999996       2 4      7999999999887654322110   011123346677776542


Q ss_pred             ----------cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 ----------SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ----------~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                                ..+....|.|+|+..+.+++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G  263 (390)
T 2zmd_A          232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYG  263 (390)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccCCCChhhHHHHHHHHHHHHHC
Confidence                      1233456889999999988876

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.53  E-value=3.8e-13  Score=135.56  Aligned_cols=145  Identities=17%  Similarity=0.184  Sum_probs=93.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  +  ..+..||||+.......                            +..       
T Consensus        30 ~~~lg~G~~g~Vy~~~~~~~--~--~~~~~~avk~~~~~~~~----------------------------~~~-------   70 (298)
T 3f66_A           30 NEVIGRGHFGCVYHGTLLDN--D--GKKIHCAVKSLNRITDI----------------------------GEV-------   70 (298)
T ss_dssp             EEEEEEETTEEEEEEEEC---------CEEEEEEEETTCCSH----------------------------HHH-------
T ss_pred             cceeeecCCceEEEEEEecC--C--CceeEEEEEecccCCCH----------------------------HHH-------
Confidence            57899999999999998642  1  12357899987643111                            000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc---ccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV---YPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~---~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a  443 (581)
                         -.+.+|+..+.++.     ++++  .+.+   .......++||||++|.+|.+++......  ......++..++.+
T Consensus        71 ---~~~~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~  140 (298)
T 3f66_A           71 ---SQFLTEGIIMKDFS-----HPNV--LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG  140 (298)
T ss_dssp             ---HHHHHHHHHHHTCC-----CTTB--CCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhCC-----CCCE--eeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence               12344555444331     2222  2222   22234558999999999999998642221  11222344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                       +..||..|++|+|+||+||+++       .++      .++|+|||++..+.
T Consensus       141 -l~~lH~~~i~H~dikp~Nil~~-------~~~------~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          141 -MKYLASKKFVHRDLAARNCMLD-------EKF------TVKVADFGLARDMY  179 (298)
T ss_dssp             -HHHHHHTTCCCSCCSGGGEEEC-------TTC------CEEECSCGGGCCCS
T ss_pred             -HHHHHhCCccCCCCchheEEEC-------CCC------CEEECccccccccc
Confidence             8889999999999999999998       667      89999999997654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.53  E-value=5.8e-13  Score=136.68  Aligned_cols=144  Identities=21%  Similarity=0.191  Sum_probs=93.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+....   ....|+.||||+.++.-.+.                             .       
T Consensus        46 ~~~lg~G~~g~V~~~~~~~~---~~~~~~~vavK~~~~~~~~~-----------------------------~-------   86 (326)
T 2w1i_A           46 LQQLGKGNFGSVEMCRYDPL---QDNTGEVVAVKKLQHSTEEH-----------------------------L-------   86 (326)
T ss_dssp             EEEEECCSSEEEEEEEECTT---SSSCCEEEEEEEESSCCSHH-----------------------------H-------
T ss_pred             eeeeccCCCeEEEEEEeccc---cCCCceEEEEEEeccCCHHH-----------------------------H-------
Confidence            57899999999999985310   01127999999987642110                             0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~  442 (581)
                         -++.+|.+.+.++.     +++  +++.+.-.    ....++||||++|.+|.+++.....  .......++..++.
T Consensus        87 ---~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~  156 (326)
T 2w1i_A           87 ---RDFEREIEILKSLQ-----HDN--IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK  156 (326)
T ss_dssp             ---HHHHHHHHHHHTCC-----CTT--BCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhCC-----CCC--eeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence               12344555554331     222  22222111    1245799999999999999865322  11122334444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      + +..||..|++|+|+||+||+++       .+|      +++|+|||++..+
T Consensus       157 a-L~~LH~~~ivH~dikp~NIli~-------~~~------~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          157 G-MEYLGTKRYIHRDLATRNILVE-------NEN------RVKIGDFGLTKVL  195 (326)
T ss_dssp             H-HHHHHHTTEECSCCCGGGEEEE-------ETT------EEEECCCTTCEEC
T ss_pred             H-HHHHHhCCEeccCCCcceEEEc-------CCC------cEEEecCcchhhc
Confidence            3 7889999999999999999998       677      8999999998654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.53  E-value=9.1e-15  Score=160.21  Aligned_cols=145  Identities=16%  Similarity=0.171  Sum_probs=95.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.......                                      
T Consensus        12 ~~~LG~G~fG~Vy~a~~~~~-------~~~vAvK~~~~~~~~--------------------------------------   46 (483)
T 3sv0_A           12 GRKIGSGSFGEIYLGTNIQT-------NEEVAIKLENVKTKH--------------------------------------   46 (483)
T ss_dssp             CCCCEECSSCEEEEEEETTT-------CCEEEEEEEETTCSS--------------------------------------
T ss_pred             EEEEeeCCCEEEEEEEECCC-------CcEEEEEEecccccc--------------------------------------
Confidence            57899999999999998764       799999986543110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                         -++.+|.+.+..+    .....+.....+.......+|||||+ |.+|.+++.....  .......++..++.+ +.
T Consensus        47 ---~~~~~E~~il~~L----~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~a-L~  117 (483)
T 3sv0_A           47 ---PQLLYESKIYRIL----QGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR-VE  117 (483)
T ss_dssp             ---CCHHHHHHHHHHT----TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHH-HH
T ss_pred             ---HHHHHHHHHHHHh----cCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHH-HH
Confidence               0122343333332    22222322223333345568999999 9999999864222  122223444444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      .||..|++|+||||.|||+...+    .++      .++|+|||++..+..
T Consensus       118 yLH~~gIvHrDIKP~NILl~~~~----~~~------~vkL~DFGla~~~~~  158 (483)
T 3sv0_A          118 FVHSKSFLHRDIKPDNFLMGLGR----RAN------QVYIIDFGLAKKYRD  158 (483)
T ss_dssp             HHHHTTEECCCCCGGGEEECCGG----GTT------CEEECCCTTCEECBC
T ss_pred             HHHHCCEeecccCcceEEEecCC----CCC------eEEEEeCCcceeccC
Confidence            89999999999999999995211    445      899999999986644

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.53  E-value=4.5e-14  Score=147.53  Aligned_cols=159  Identities=15%  Similarity=0.186  Sum_probs=96.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+++.+  +....++.||||+...... ....++.+++.+..             .          
T Consensus        40 ~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~~~-------------~----------   93 (364)
T 3op5_A           40 GLPIGQGGFGCIYLADMNSS--ESVGSDAPCVVKVEPSDNG-PLFTELKFYQRAAK-------------P----------   93 (364)
T ss_dssp             EEECCCC-CCEEEEEEECCS--SCCCTTCSEEEEEEETTCH-HHHHHHHHHHHHCC-------------H----------
T ss_pred             EEEEecCCCeEEEEeeecCc--cccccccceEEEEeeccch-hHHHHHHHHHhhhh-------------h----------
Confidence            67999999999999998753  2122358999999876532 22333333322110             0          


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC------CCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV------HPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~------t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~  440 (581)
                          ++..|...+       ....+..+++.+....      ...+|||||+ |.+|.+++.....  .......++..+
T Consensus        94 ----~~~~e~~~~-------~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi  161 (364)
T 3op5_A           94 ----EQIQKWIRT-------RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRI  161 (364)
T ss_dssp             ----HHHHHHHHH-------TTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHH
T ss_pred             ----HHHHHHHHH-------hhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHH
Confidence                011111111       1122233444433222      1258999999 9999999865321  122223445444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      +.+ +..||..|++|+|+||.|||++..     .++      .++|+|||++..+..
T Consensus       162 ~~~-l~~lH~~~iiHrDlkp~Nill~~~-----~~~------~~kl~DFG~a~~~~~  206 (364)
T 3op5_A          162 LDI-LEYIHEHEYVHGDIKASNLLLNYK-----NPD------QVYLVDYGLAYRYCP  206 (364)
T ss_dssp             HHH-HHHHHHTTEECCCCCGGGEEEESS-----CTT------CEEECCCTTCEESSG
T ss_pred             HHH-HHHHHHCCeEEecCCHHHEEEecC-----CCC------eEEEEECCcceeccc
Confidence            444 888999999999999999999821     234      899999999976544

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.53  E-value=5.9e-13  Score=133.75  Aligned_cols=144  Identities=13%  Similarity=0.146  Sum_probs=93.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  +  ..+..||||+........                            ..       
T Consensus        26 ~~~lg~G~~g~Vy~~~~~~~--~--~~~~~~aiK~~~~~~~~~----------------------------~~-------   66 (298)
T 3pls_A           26 DRVIGKGHFGVVYHGEYIDQ--A--QNRIQCAIKSLSRITEMQ----------------------------QV-------   66 (298)
T ss_dssp             EEEEEEETTEEEEEEEEECS--S--SCEEEEEEEEETTCCSHH----------------------------HH-------
T ss_pred             CceeccCCCceEEEEEEecC--C--CceeeeeeeeccccccHH----------------------------HH-------
Confidence            47899999999999997653  1  114589999876432110                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC---CCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL---VHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l---~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a  443 (581)
                         -.+.+|...+.++     .++++  .+.+.-+   ....+++|||++|.+|.+++......  ......++..++.+
T Consensus        67 ---~~~~~E~~~l~~l-----~h~~i--v~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~  136 (298)
T 3pls_A           67 ---EAFLREGLLMRGL-----NHPNV--LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARG  136 (298)
T ss_dssp             ---HHHHHHHHHHHTC-----CCTTB--CCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhC-----CCCCe--eeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHH
Confidence               1234455444433     12322  2222211   22337999999999999998652221  11222344444443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                       +..||..|++|+|+||+||+++       .+|      .++|+|||++..+
T Consensus       137 -l~~LH~~~i~H~dikp~Nili~-------~~~------~~kl~Dfg~~~~~  174 (298)
T 3pls_A          137 -MEYLAEQKFVHRDLAARNCMLD-------ESF------TVKVADFGLARDI  174 (298)
T ss_dssp             -HHHHHHTTCCCSCCSGGGEEEC-------TTC------CEEECCTTSSCTT
T ss_pred             -HHHHHhCCcccCCCCcceEEEc-------CCC------cEEeCcCCCcccc
Confidence             8889999999999999999998       677      8999999998754

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.53  E-value=2.6e-14  Score=145.74  Aligned_cols=147  Identities=16%  Similarity=0.204  Sum_probs=95.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+..  .....++.||||+.+.....                                      
T Consensus        30 ~~~lg~G~~g~Vy~~~~~~~--~~~~~~~~vaiK~~~~~~~~--------------------------------------   69 (322)
T 1p4o_A           30 SRELGQGSFGMVYEGVAKGV--VKDEPETRVAIKTVNEAASM--------------------------------------   69 (322)
T ss_dssp             EEEEEECSSSEEEEEEEEEE--ETTEEEEEEEEEECCTTSCH--------------------------------------
T ss_pred             eeEeccCCceEEEeeeecCc--cCCCCceEEEEEecccccCH--------------------------------------
Confidence            57899999999999987621  00012589999987643211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-----------chhhHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-----------HERLKSA  435 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------~~~~~~~  435 (581)
                      ..+.++.+|.+.+.++     .+++  +++.+.  ......++||||++|++|.+++.....           .......
T Consensus        70 ~~~~~~~~E~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  142 (322)
T 1p4o_A           70 RERIEFLNEASVMKEF-----NCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ  142 (322)
T ss_dssp             HHHHHHHHHHHHGGGC-----CCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc-----CCCC--EeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHH
Confidence            0112344555544332     1222  233332  223456899999999999999865321           1111223


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      ++..++.+ +..||..|++|+|+||.||+++       .+|      +++|+|||++..+.
T Consensus       143 i~~qi~~~-l~~lH~~~i~H~dikp~NIli~-------~~~------~~kl~Dfg~~~~~~  189 (322)
T 1p4o_A          143 MAGEIADG-MAYLNANKFVHRDLAARNCMVA-------EDF------TVKIGDFGMTRDIY  189 (322)
T ss_dssp             HHHHHHHH-HHHHHHTTCBCSCCSGGGEEEC-------TTC------CEEECCTTCCCGGG
T ss_pred             HHHHHHHH-HHHHHHCCCccCCCccceEEEc-------CCC------eEEECcCccccccc
Confidence            44444443 8889999999999999999998       667      89999999987553

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.52  E-value=5.5e-14  Score=141.30  Aligned_cols=144  Identities=15%  Similarity=0.171  Sum_probs=93.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.......                                      
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~--------------------------------------   49 (298)
T 1csn_A           15 GRRIGEGSFGVIFEGTNLLN-------NQQVAIKFEPRRSDA--------------------------------------   49 (298)
T ss_dssp             EEEEEECSSCEEEEEEETTT-------TEEEEEEEEECCTTS--------------------------------------
T ss_pred             EEEEeecCCEEEEEEEECCC-------CcEEEEEEeccCCcc--------------------------------------
Confidence            57899999999999998764       799999987543110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                         -++.+|.+.+.++.    ..+  .+|.++.  ......++||||+ |.+|.+++.....  .......++..++.+ 
T Consensus        50 ---~~~~~e~~~~~~l~----~~~--~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~-  118 (298)
T 1csn_A           50 ---PQLRDEYRTYKLLA----GCT--GIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLAR-  118 (298)
T ss_dssp             ---CCHHHHHHHHHHTT----TCT--TCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHH-
T ss_pred             ---HHHHHHHHHHHHHh----cCC--CCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHH-
Confidence               01223444443331    122  2333332  2234558999999 9999999875322  222223455555444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      +..||..|++|+|+||.||+++       .+| ......++|+|||++..+.
T Consensus       119 l~~lH~~~ivH~Dlkp~NIl~~-------~~~-~~~~~~~kl~Dfg~~~~~~  162 (298)
T 1csn_A          119 VQSIHEKSLVYRDIKPDNFLIG-------RPN-SKNANMIYVVDFGMVKFYR  162 (298)
T ss_dssp             HHHHHTTTEECCCCCGGGEEEC-------CSS-STTTTCEEECCCTTCEESB
T ss_pred             HHHHHhCCEecCCCCHHHEEec-------cCC-CCCCCeEEEEECccccccc
Confidence            8889999999999999999998       322 0011269999999987553

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.52  E-value=2.5e-14  Score=161.00  Aligned_cols=190  Identities=19%  Similarity=0.201  Sum_probs=118.3

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      ..||+|++|+||+|..+.+ .    .+..||||+.+++.....                                     
T Consensus       342 ~~LG~G~fG~Vy~~~~~~~-~----~~~~vAvK~~~~~~~~~~-------------------------------------  379 (613)
T 2ozo_A          342 IELGCGNFGSVRQGVYRMR-K----KQIDVAIKVLKQGTEKAD-------------------------------------  379 (613)
T ss_dssp             EEEEECSSSEEEEEEEECS-S----CEEEEEEEECCCCCSSTT-------------------------------------
T ss_pred             cEEecCCCcEEEEEEEecC-C----CcEEEEEEEcCCCCChHH-------------------------------------
Confidence            3799999999999988642 1    157899999876532110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                       .-+|.+|++.+.++     .+++  +.+.+.-. ....++||||++|++|.+++.....  .......++..++.+ +.
T Consensus       380 -~~~~~~E~~il~~l-----~hpn--iv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~-L~  450 (613)
T 2ozo_A          380 -TEEMMREAQIMHQL-----DNPY--IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG-MK  450 (613)
T ss_dssp             -HHHHHHHHHHHTTC-----CCTT--BCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHH-HH
T ss_pred             -HHHHHHHHHHHHhC-----CCCC--EeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHH-HH
Confidence             01234455554433     1222  22222211 2346799999999999998854221  112223344444443 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|+||||.|||++       .++      .++|+|||++..+.......-..  ......-.+.+.|.+.. .
T Consensus       451 ~LH~~~iiHrDlkp~NILl~-------~~~------~vkL~DFGla~~~~~~~~~~~~~--~~~~~~~~y~APE~~~~-~  514 (613)
T 2ozo_A          451 YLEEKNFVHRNLAARNVLLV-------NRH------YAKISDFGLSKALGADDSYYTAR--SAGKWPLKWYAPECINF-R  514 (613)
T ss_dssp             HHHHTTCCCSCCSGGGEEEE-------ETT------EEEECCCSTTTTCC----------------CCTTSCHHHHHH-C
T ss_pred             HHHHCCEEcCcCCHHHEEEc-------CCC------cEEEeeccCcccccCCCceeeec--cCCCCccceeCHhhhcC-C
Confidence            89999999999999999999       667      89999999998876543211100  00000113566676643 4


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 008021          527 KQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ......|.|+|+..+.++++
T Consensus       515 ~~~~~sDvwSlGv~l~ellt  534 (613)
T 2ozo_A          515 KFSSRSDVWSYGVTMWEALS  534 (613)
T ss_dssp             CCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHHHHHHH
Confidence            44456799999999999886

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.52  E-value=4.9e-15  Score=150.67  Aligned_cols=199  Identities=14%  Similarity=0.048  Sum_probs=116.3

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|. .+.||+|++|.||+|+...+       |+.||||+.+..-.....                               
T Consensus        32 ~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~-------------------------------   73 (312)
T 2iwi_A           32 EYRLGPLLGKGGFGTVFAGHRLTD-------RLQVAIKVIPRNRVLGWS-------------------------------   73 (312)
T ss_dssp             -CEEEEEEEEETTEEEEEEECTTT-------CCEEEEEECCSTTTC----------------------------------
T ss_pred             ceEEeeEEEcCCCEEEEEEEEccC-------CeEEEEEEEecccccccc-------------------------------
Confidence            344 68899999999999998764       699999998654211000                               


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEec-cCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETY-EQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEy-i~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                        ....+..+.+|...+.++.... .+++  +++.+..  .....++|||| ++|.+|.+++..... .......++..+
T Consensus        74 --~~~~~~~~~~e~~~l~~l~~~~-~h~~--i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi  148 (312)
T 2iwi_A           74 --PLSDSVTCPLEVALLWKVGAGG-GHPG--VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQV  148 (312)
T ss_dssp             -------CCCCHHHHHHHHHHSSC-CCSS--BCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred             --cchhhHHHHHHHHHHHhhcccC-CCCC--eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHH
Confidence              0011122344555555553221 1222  2333322  23456899999 899999999865321 122223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++|+|+||+||+++.      .+|      .++|+|||++..+........       .....+.+.|
T Consensus       149 ~~~-l~~lH~~~i~H~dlkp~Nil~~~------~~~------~~kl~dfg~~~~~~~~~~~~~-------~~~~~y~aPE  208 (312)
T 2iwi_A          149 VAA-IQHCHSRGVVHRDIKDENILIDL------RRG------CAKLIDFGSGALLHDEPYTDF-------DGTRVYSPPE  208 (312)
T ss_dssp             HHH-HHHHHHHTEECCCCSGGGEEEET------TTT------EEEECCCSSCEECCSSCBCCC-------CSCTTTSCHH
T ss_pred             HHH-HHHHHHCCeeecCCChhhEEEeC------CCC------eEEEEEcchhhhcccCccccc-------CCcccccCce
Confidence            444 88899999999999999999971      345      899999999876654321110       0112234444


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+..........|.++++..+.+++.+
T Consensus       209 ~~~~~~~~~~~~Di~slG~il~~l~~g  235 (312)
T 2iwi_A          209 WISRHQYHALPATVWSLGILLYDMVCG  235 (312)
T ss_dssp             HHHHSCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             eeecCCCCCccchHHHHHHHHHHHHHC
Confidence            443322222235667777777776655

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.52  E-value=1.2e-12  Score=131.84  Aligned_cols=145  Identities=18%  Similarity=0.243  Sum_probs=93.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ++.||+|++|.||+|.....     ..++.||||+.++.....                           ...       
T Consensus        22 ~~~lg~G~~g~Vy~~~~~~~-----~~~~~vavK~~~~~~~~~---------------------------~~~-------   62 (291)
T 1xbb_A           22 DKELGSGNFGTVKKGYYQMK-----KVVKTVAVKILKNEANDP---------------------------ALK-------   62 (291)
T ss_dssp             EEEEEECSSEEEEEEEEECS-----SSEEEEEEEEEC-----C---------------------------HHH-------
T ss_pred             cCccccccCeeeEeeeecCC-----CceeeEEEEeecccccCH---------------------------HHH-------
Confidence            45999999999999966432     116899999976542110                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l~  446 (581)
                         -++.+|.+.+.++     .+++  +++.+.-. ....++||||++|.+|.+++..... .......++..++.+ +.
T Consensus        63 ---~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~-l~  131 (291)
T 1xbb_A           63 ---DELLAEANVMQQL-----DNPY--IVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG-MK  131 (291)
T ss_dssp             ---HHHHHHHHHHHTC-----CCTT--BCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHH-HH
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--EEEEEEEECCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHH-HH
Confidence               1234455544433     1222  22333222 2345899999999999999865321 112223344444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      .||..|++|+|+||.||+++       .++      .++|+|||++..+.
T Consensus       132 ~LH~~~i~H~dikp~Nil~~-------~~~------~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A          132 YLEESNFVHRDLAARNVLLV-------TQH------YAKISDFGLSKALR  168 (291)
T ss_dssp             HHHHTTEECSCCSGGGEEEE-------ETT------EEEECCCTTCEECC
T ss_pred             HHHhCCeEcCCCCcceEEEe-------CCC------cEEEccCCcceeec
Confidence            89999999999999999999       667      89999999987653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=2.4e-14  Score=151.28  Aligned_cols=193  Identities=15%  Similarity=0.125  Sum_probs=107.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+ +|   .+..||||+.+.....                            +..       
T Consensus        94 ~~~LG~G~fg~Vy~~~~~~~-~~---~~~~vavK~~~~~~~~----------------------------~~~-------  134 (373)
T 3c1x_A           94 NEVIGRGHFGCVYHGTLLDN-DG---KKIHCAVKSLNRITDI----------------------------GEV-------  134 (373)
T ss_dssp             EEEEECCSSSEEEEEEEEET-TT---EEEEEEEEECCSCSCS----------------------------HHH-------
T ss_pred             CcEeeeCCCeEEEEEEEECC-CC---cEEEEEEEEcCCCCCH----------------------------HHH-------
Confidence            46899999999999998642 11   1357899986543111                            000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc---cCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY---PLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~---~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a  443 (581)
                         -+|.+|+..+.++     .+++  +.+.+.   ......++||||++|++|.+++......  ......++..++.+
T Consensus       135 ---~~~~~E~~il~~l-----~hpn--Iv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~a  204 (373)
T 3c1x_A          135 ---SQFLTEGIIMKDF-----SHPN--VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG  204 (373)
T ss_dssp             ---HHHHHHHTTSTTC-----CCTT--BCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--cceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHH
Confidence               1234454433322     1222  222222   2234558999999999999998643221  11122344444443


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       +..||..|++|+|+||.|||++       .++      .++|+|||++..+........... ......-.+.+.|.+.
T Consensus       205 -L~~LH~~~ivHrDlkp~NIll~-------~~~------~~kL~DFG~a~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~  269 (373)
T 3c1x_A          205 -MKFLASKKFVHRDLAARNCMLD-------EKF------TVKVADFGLARDMYDKEFDSVHNK-TGAKLPVKWMALESLQ  269 (373)
T ss_dssp             -HHHHHHTTCCCSCCCGGGEEEC-------TTC------CEEECCC----------------------CCGGGSCHHHHH
T ss_pred             -HHHHHHCCEecCccchheEEEC-------CCC------CEEEeecccccccccccccccccc-CCCCCcccccChHHhc
Confidence             8889999999999999999998       667      899999999987654332211100 0000111245555553


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhh
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      . .......|.|+|+..+.+++.
T Consensus       270 ~-~~~~~~~DvwSlG~il~ellt  291 (373)
T 3c1x_A          270 T-QKFTTKSDVWSFGVLLWELMT  291 (373)
T ss_dssp             H-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             C-CCCCcHHHHHHHHHHHHHHHh
Confidence            3 333345678888888888776

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.52  E-value=2.4e-14  Score=148.00  Aligned_cols=189  Identities=13%  Similarity=0.023  Sum_probs=119.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       ++.||+|+........                          .+.        
T Consensus        46 ~~~lg~G~~g~Vy~~~~~~~-------~~~~a~K~~~~~~~~~--------------------------~~~--------   84 (335)
T 2owb_A           46 GRFLGKGGFAKCFEISDADT-------KEVFAGKIVPKSLLLK--------------------------PHQ--------   84 (335)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEEGGGCCS--------------------------HHH--------
T ss_pred             EEEEeeCCCeEEEEEEECCC-------CCEEEEEEechhhhcC--------------------------HHH--------
Confidence            57899999999999999865       7999999976432100                          000        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|...+.++     .+++  +++.+..  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        85 --~~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~a-L  154 (335)
T 2owb_A           85 --REKMSMEISIHRSL-----AHQH--VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG-C  154 (335)
T ss_dssp             --HHHHHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--CCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHH-H
Confidence              01233454444332     1222  2333322  23345899999999999998764321 122223344444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.||+++       .+|      +++|+|||++..+.......     ........+.+.|.+.. 
T Consensus       155 ~~LH~~~ivH~dlkp~NIl~~-------~~~------~~kl~Dfg~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~-  215 (335)
T 2owb_A          155 QYLHRNRVIHRDLKLGNLFLN-------EDL------EVKIGDFGLATKVEYDGERK-----KVLCGTPNYIAPEVLSK-  215 (335)
T ss_dssp             HHHHHTTEECSCCCGGGEEEC-------TTC------CEEECCCTTCEECCSTTCCB-----CCCCSCCSSCCHHHHHT-
T ss_pred             HHHHHCCCEecCCCchhEEEc-------CCC------CEEEeeccCceecccCcccc-----cccCCCccccCHHHhcc-
Confidence            889999999999999999998       667      89999999998764221100     00011123455565543 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++|+..+.+++.+
T Consensus       216 ~~~~~~~Di~slG~il~~l~~g  237 (335)
T 2owb_A          216 KGHSFEVDVWSIGCIMYTLLVG  237 (335)
T ss_dssp             SCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCchhhHHHHHHHHHHHHHC
Confidence            2333456888888888888876

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.52  E-value=1.3e-12  Score=132.24  Aligned_cols=147  Identities=20%  Similarity=0.207  Sum_probs=96.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....  +....++.||||+.+.+....                                     
T Consensus        32 ~~~lg~G~~g~Vy~~~~~~~--~~~~~~~~vavK~~~~~~~~~-------------------------------------   72 (316)
T 2xir_A           32 GKPLGRGAFGQVIEADAFGI--DKTATCRTVAVKMLKEGATHS-------------------------------------   72 (316)
T ss_dssp             EEEEEECSSEEEEEEEEESS--SSTTCEEEEEEEEECTTCCHH-------------------------------------
T ss_pred             eeEEcCCCceeEEEEEEecC--CccccceEEEEEecccCCCcH-------------------------------------
Confidence            57899999999999986431  111236999999987652210                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc---CCCCcEEEEeccCCccHHHHHHhhhc-----------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP---LVHPAVLVETYEQGECVSRYVDELQG-----------------  428 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~---l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------  428 (581)
                       ..-.+.+|.+.+.++.    .++++  ++.+..   -...-++||||++|.+|.+++.....                 
T Consensus        73 -~~~~~~~E~~~l~~l~----~hp~i--v~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  145 (316)
T 2xir_A           73 -EHRALMSELKILIHIG----HHLNV--VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL  145 (316)
T ss_dssp             -HHHHHHHHHHHHHHHC----CCTTB--CCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCE
T ss_pred             -HHHHHHHHHHHHHhcc----cCCCe--eeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhcccc
Confidence             0012345655555442    22322  222221   12336899999999999999865321                 


Q ss_pred             chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       429 ~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      .......++..++.+ +..+|..|++|+|+||+||+++       .++      .++|+|||++..+
T Consensus       146 ~~~~~~~~~~qi~~a-l~~lH~~~i~H~dikp~Nil~~-------~~~------~~kl~Dfg~~~~~  198 (316)
T 2xir_A          146 TLEHLICYSFQVAKG-MEFLASRKCIHRDLAARNILLS-------EKN------VVKICDFGLARDI  198 (316)
T ss_dssp             EHHHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCCGGGSCT
T ss_pred             CHHHHHHHHHHHHHH-HHHHHhCCcccccCccceEEEC-------CCC------CEEECCCcccccc
Confidence            111123344444444 7889999999999999999998       677      8999999998754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.52  E-value=3.4e-14  Score=144.53  Aligned_cols=192  Identities=15%  Similarity=0.109  Sum_probs=104.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....    ...++.||||+.+++....                           +..       
T Consensus        39 ~~~lg~G~~g~V~~~~~~~~----~~~~~~vavK~~~~~~~~~---------------------------~~~-------   80 (313)
T 3brb_A           39 GKILGEGEFGSVMEGNLKQE----DGTSLKVAVKTMKLDNSSQ---------------------------REI-------   80 (313)
T ss_dssp             EEEEEC-CCCCEEEEEEECT----TSCEEEEEEEEC---CCCH---------------------------HHH-------
T ss_pred             ccceeecCCeEEEEEEEecc----CCceeEEEEEEEeccccch---------------------------hHH-------
Confidence            57899999999999988652    1125799999976542110                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC-------CCcEEEEeccCCccHHHHHHhhh-------cchhhHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV-------HPAVLVETYEQGECVSRYVDELQ-------GHERLKS  434 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~-------t~~VLVmEyi~G~~L~~~l~~~~-------~~~~~~~  434 (581)
                         -++.+|++.+.++.     +++  +.+.+.-..       ...++||||++|.+|.+++....       .......
T Consensus        81 ---~~~~~e~~~l~~l~-----h~~--iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  150 (313)
T 3brb_A           81 ---EEFLSEAACMKDFS-----HPN--VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL  150 (313)
T ss_dssp             ---HHHHHHHHHHHTCC-----CTT--BCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHH
T ss_pred             ---HHHHHHHHHHhcCC-----CCC--eeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHH
Confidence               12344555554331     222  222222111       12389999999999999884321       0111223


Q ss_pred             HHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          435 ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      .++..++.+ +..||..|++|+|+||+||+++       .++      .++|+|||++..+..........   .....-
T Consensus       151 ~i~~qi~~a-L~~LH~~~ivH~dikp~NIli~-------~~~------~~kl~Dfg~~~~~~~~~~~~~~~---~~~~~~  213 (313)
T 3brb_A          151 KFMVDIALG-MEYLSNRNFLHRDLAARNCMLR-------DDM------TVCVADFGLSKKIYSGDYYRQGR---IAKMPV  213 (313)
T ss_dssp             HHHHHHHHH-HHHHHTTTCCCCCCSGGGEEEC-------TTS------CEEECSCSCC-------------------CCG
T ss_pred             HHHHHHHHH-HHHHHhCCcccCCCCcceEEEc-------CCC------cEEEeecCcceecccccccCccc---ccCCCc
Confidence            344444444 8889999999999999999998       667      89999999998765432111000   000011


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .+.++|.+.. .......|.++|+..+.+++.
T Consensus       214 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~~  244 (313)
T 3brb_A          214 KWIAIESLAD-RVYTSKSDVWAFGVTMWEIAT  244 (313)
T ss_dssp             GGSCHHHHHS-SCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccCchhhcC-CCccchhhhHHHHHHHHHHHh
Confidence            2334444322 222233466666666666655

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.51  E-value=2.9e-14  Score=146.26  Aligned_cols=190  Identities=15%  Similarity=0.113  Sum_probs=111.7

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEE--EEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVV--AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV  361 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~V--AVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v  361 (581)
                      .+|. .+.||+|++|.||+|+.+.+       |+.+  |||+.+......                              
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~v~iK~~~~~~~~~------------------------------   67 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKD-------GLRMDAAIKRMKEYASKD------------------------------   67 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEET-------TEEEEEEEEEEECC----------------------------------
T ss_pred             HHccceeeeecCCCceEEEEEEccC-------CcccceeeeeeccccchH------------------------------
Confidence            3444 67899999999999999764       5654  999876431110                              


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhh------------
Q 008021          362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQ------------  427 (581)
Q Consensus       362 ~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~------------  427 (581)
                              ..-++.+|.+.+.++    ..+++  +++.+.  ......++||||++|.+|.+++....            
T Consensus        68 --------~~~~~~~E~~~l~~l----~~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  133 (327)
T 1fvr_A           68 --------DHRDFAGELEVLCKL----GHHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN  133 (327)
T ss_dssp             ----------CHHHHHHHHHTTC----CCCTT--BCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHT
T ss_pred             --------HHHHHHHHHHHHHhc----cCCCc--hhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccc
Confidence                    001233454444322    12333  233332  22344589999999999999986532            


Q ss_pred             -----cchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHH
Q 008021          428 -----GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVN  502 (581)
Q Consensus       428 -----~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~  502 (581)
                           ........++..++.+ +..||..|++|+|+||.||+++       .++      .++|+|||++..........
T Consensus       134 ~~~~~~~~~~~~~i~~qi~~a-L~~LH~~~ivH~dlkp~NIl~~-------~~~------~~kL~Dfg~~~~~~~~~~~~  199 (327)
T 1fvr_A          134 STASTLSSQQLLHFAADVARG-MDYLSQKQFIHRDLAARNILVG-------ENY------VAKIADFGLSRGQEVYVKKT  199 (327)
T ss_dssp             TBSCSSCHHHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEC-------GGG------CEEECCTTCEESSCEECCC-
T ss_pred             cccccCCHHHHHHHHHHHHHH-HHHHHhCCccCCCCccceEEEc-------CCC------eEEEcccCcCcccccccccc
Confidence                 0111122344444444 7889999999999999999998       677      89999999987443221111


Q ss_pred             HHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       503 l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..      ...-.+.++|.+.. .......|.++|+..+.++++
T Consensus       200 ~~------~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt  236 (327)
T 1fvr_A          200 MG------RLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVS  236 (327)
T ss_dssp             ---------CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHT
T ss_pred             CC------CCCccccChhhhcc-ccCCchhcchHHHHHHHHHHc
Confidence            00      00112334444322 222334567777777777664

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.51  E-value=4.2e-14  Score=142.57  Aligned_cols=188  Identities=16%  Similarity=0.149  Sum_probs=108.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+..          ..||||+.+......                           ...       
T Consensus        29 ~~~lG~G~~g~Vy~~~~~----------~~vavK~~~~~~~~~---------------------------~~~-------   64 (289)
T 3og7_A           29 GQRIGSGSFGTVYKGKWH----------GDVAVKMLNVTAPTP---------------------------QQL-------   64 (289)
T ss_dssp             EEEEEECSSEEEEEEESS----------SEEEEEEESCSSCCH---------------------------HHH-------
T ss_pred             eeEecCCCCeEEEEEEEc----------CceEEEEEeccCCCH---------------------------HHH-------
Confidence            578999999999999873          469999976542110                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc-cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY-PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~-~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                         -.|.+|.+.+.++.     +++  +...+. ......++||||++|.+|.+++.....  .......++..++.+ +
T Consensus        65 ---~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~-L  133 (289)
T 3og7_A           65 ---QAFKNEVGVLRKTR-----HVN--ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG-M  133 (289)
T ss_dssp             ---HHHHHHHHHHTTCC-----CTT--BCCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhCC-----CCc--EEEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHH-H
Confidence               12344544443321     222  222222 123345899999999999998843221  111123344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+||+++       .+|      +++|+|||++...+.......   .........+.++|.+...
T Consensus       134 ~~lH~~~i~H~Dlkp~Nil~~-------~~~------~~kl~Dfg~~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~  197 (289)
T 3og7_A          134 DYLHAKSIIHRDLKSNNIFLH-------EDN------TVKIGDFGLATEKSRWSGSHQ---FEQLSGSILWMAPEVIRMQ  197 (289)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEE-------TTT------EEEECCCC---------------------CCCTTCCHHHHC--
T ss_pred             HHHHhCCcccccCccceEEEC-------CCC------CEEEccceecccccccccccc---ccccCCCccccCchhhccc
Confidence            889999999999999999999       677      899999999876654221111   1112223345566655321


Q ss_pred             --cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 --SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 --~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                        .......|.++++..+.+++.+
T Consensus       198 ~~~~~~~~~Di~slG~il~el~~g  221 (289)
T 3og7_A          198 DSNPYSFQSDVYAFGIVLYELMTG  221 (289)
T ss_dssp             --CCSCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCcccchHHHHHHHHHHHHC
Confidence              2222345888888888888876

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.51  E-value=2.3e-14  Score=147.00  Aligned_cols=196  Identities=15%  Similarity=0.118  Sum_probs=113.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+....  +....++.||||+.+.....                                      
T Consensus        35 ~~~lg~G~~g~Vy~~~~~~~--~~~~~~~~vavK~~~~~~~~--------------------------------------   74 (327)
T 2yfx_A           35 IRGLGHGAFGEVYEGQVSGM--PNDPSPLQVAVKTLPEVCSE--------------------------------------   74 (327)
T ss_dssp             EEECC--CSSCEEEEEC----------CCEEEEEECCSSCCH--------------------------------------
T ss_pred             EEEEcCCCCeeEEEEEEcCC--CCCCccceEEEEEeccccch--------------------------------------
Confidence            57899999999999995421  01122689999987543111                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--------chhhHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--------HERLKSALAH  438 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--------~~~~~~~la~  438 (581)
                      ..+.++.+|+..+.++     .++++  ++.+.  ......++||||++|.+|.+++.....        .......++.
T Consensus        75 ~~~~~~~~E~~~l~~l-----~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~  147 (327)
T 2yfx_A           75 QDELDFLMEALIISKF-----NHQNI--VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR  147 (327)
T ss_dssp             HHHHHHHHHHHHHHHC-----CCTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhC-----CCCCC--CeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHH
Confidence            0122345566655544     23332  23322  223455899999999999999875321        1111223444


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ +..||..|++|+|+||.||+++       .+|   ....++|+|||++..+.........   ......-.+.+
T Consensus       148 qi~~a-l~~LH~~~i~H~dlkp~NIli~-------~~~---~~~~~kl~Dfg~~~~~~~~~~~~~~---~~~~~~~~y~a  213 (327)
T 2yfx_A          148 DIACG-CQYLEENHFIHRDIAARNCLLT-------CPG---PGRVAKIGDFGMARDIYRASYYRKG---GCAMLPVKWMP  213 (327)
T ss_dssp             HHHHH-HHHHHHTTCCCSCCCGGGEEES-------CSS---TTCCEEECCCHHHHHHHC------C---CGGGSCGGGCC
T ss_pred             HHHHH-HHHHhhCCeecCcCCHhHEEEe-------cCC---CcceEEECccccccccccccccccC---CCcCCCcceeC
Confidence            44443 8889999999999999999998       222   1126999999998754322110000   00000113556


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +|.+.. .......|.++|+..+.++++
T Consensus       214 PE~~~~-~~~~~~~Di~slG~il~ellt  240 (327)
T 2yfx_A          214 PEAFME-GIFTSKTDTWSFGVLLWEIFS  240 (327)
T ss_dssp             HHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             HhHhcC-CCCCchhhHHHHHHHHHHHHc
Confidence            665543 334446688888888888875

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.51  E-value=2e-14  Score=144.89  Aligned_cols=189  Identities=13%  Similarity=0.023  Sum_probs=117.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||+|+........                          .+.        
T Consensus        20 ~~~lg~G~~g~Vy~~~~~~~-------~~~~a~K~~~~~~~~~--------------------------~~~--------   58 (294)
T 2rku_A           20 GRFLGKGGFAKCFEISDADT-------KEVFAGKIVPKSLLLK--------------------------PHQ--------   58 (294)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEEGGGCCS--------------------------HHH--------
T ss_pred             EEEEeecCCEEEEEEEECCC-------CceEEEEEechhhccC--------------------------HHH--------
Confidence            57899999999999999864       7999999876432100                          000        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|...+.++     .+++  +++.+.-  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        59 --~~~~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~-l  128 (294)
T 2rku_A           59 --REKMSMEISIHRSL-----AHQH--VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG-C  128 (294)
T ss_dssp             --HHHHHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--EeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence              01233454444332     1222  2333322  22345799999999999998764321 122223444444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|+|+||.||+++       .+|      +++|+|||++..+.......     ........+.+.|.+.. 
T Consensus       129 ~~lH~~~i~H~dl~p~Nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~-  189 (294)
T 2rku_A          129 QYLHRNRVIHRDLKLGNLFLN-------EDL------EVKIGDFGLATKVEYDGERK-----KVLCGTPNYIAPEVLSK-  189 (294)
T ss_dssp             HHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCTTCEECCSTTCCB-----CCCCSCCSSCCHHHHTT-
T ss_pred             HHHHHCCccccCCChHhEEEc-------CCC------CEEEEeccCceecccCcccc-----ccccCCCCcCCcchhcc-
Confidence            889999999999999999998       667      89999999988664221100     00001112445555432 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.++++..+.+++.+
T Consensus       190 ~~~~~~~Di~slG~~l~~l~~g  211 (294)
T 2rku_A          190 KGHSFEVDVWSIGCIMYTLLVG  211 (294)
T ss_dssp             SCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCchhhHHHHHHHHHHHHhC
Confidence            2333456888888888888776

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.51  E-value=1.1e-14  Score=149.67  Aligned_cols=194  Identities=14%  Similarity=0.085  Sum_probs=117.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+       |+.||||+.++.....                    .....            
T Consensus        48 ~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~--------------------~~~~~------------   88 (320)
T 3a99_A           48 GPLLGSGGFGSVYSGIRVSD-------NLPVAIKHVEKDRISD--------------------WGELP------------   88 (320)
T ss_dssp             EEECSSSSSCEEEEEEETTT-------TEEEEEEEEEGGGCCC--------------------EEECT------------
T ss_pred             EEEEeeCCCeEEEEEEECCC-------CcEEEEEEEecccchh--------------------hhhhh------------
Confidence            57899999999999998764       7999999976542110                    00000            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCC-ccHHHHHHhhhc-chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQG-ECVSRYVDELQG-HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G-~~L~~~l~~~~~-~~~~~~~la~~~i~a~  444 (581)
                       .+-.+.+|...+.++..   ..++  +++.+.  ......++||||+++ .+|.+++..... .......++..++.+ 
T Consensus        89 -~~~~~~~E~~~l~~l~~---~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~-  161 (320)
T 3a99_A           89 -NGTRVPMEVVLLKKVSS---GFSG--VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA-  161 (320)
T ss_dssp             -TCCEEEHHHHHHHHHCS---SSCS--BCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHH-
T ss_pred             -hhhHHHHHHHHHHhhcc---CCCC--ceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHH-
Confidence             00112234444444321   1222  223332  223455899999986 899998865321 122223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||.||+++.      .++      .++|+|||++..+........       .....+.++|.+..
T Consensus       162 L~~LH~~~ivH~Dlkp~NIll~~------~~~------~~kL~Dfg~~~~~~~~~~~~~-------~gt~~y~aPE~~~~  222 (320)
T 3a99_A          162 VRHCHNCGVLHRDIKDENILIDL------NRG------ELKLIDFGSGALLKDTVYTDF-------DGTRVYSPPEWIRY  222 (320)
T ss_dssp             HHHHHHTTEECCCCSGGGEEEET------TTT------EEEECCCTTCEECCSSCBCCC-------CSCGGGSCHHHHHH
T ss_pred             HHHHHHCCcEeCCCCHHHEEEeC------CCC------CEEEeeCccccccccccccCC-------CCCccCCChHHhcc
Confidence            78899999999999999999971      345      899999999887654321110       11223555665543


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ........|.++|+..+.+++.+
T Consensus       223 ~~~~~~~~Di~slG~il~el~~g  245 (320)
T 3a99_A          223 HRYHGRSAAVWSLGILLYDMVCG  245 (320)
T ss_dssp             SCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCccchHHhHHHHHHHHHHC
Confidence            32223345788888888887765

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.50  E-value=7.7e-15  Score=150.85  Aligned_cols=192  Identities=16%  Similarity=0.127  Sum_probs=112.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  |+ .-..+||+|+........                   ...               
T Consensus        18 ~~~lG~G~~g~Vy~~~~~~~--~~-~~~~kv~~K~~~~~~~~~-------------------~~~---------------   60 (325)
T 3kex_A           18 LKVLGSGVFGTVHKGVWIPE--GE-SIKIPVCIKVIEDKSGRQ-------------------SFQ---------------   60 (325)
T ss_dssp             EEEEECCSSCEEEEEEECCT--TC-SCCEEEEEEEECCTTSCS-------------------CBC---------------
T ss_pred             eeeeeecCCceEEEEEEcCC--Cc-eEEEEEEEEeccccccHH-------------------HHH---------------
Confidence            57899999999999998764  20 011348888765431100                   000               


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                          .+.+|...+.++     .+++  +++.+.-. ....++||||++|++|.+++.....  .......++..++.+ +
T Consensus        61 ----~~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~-l  128 (325)
T 3kex_A           61 ----AVTDHMLAIGSL-----DHAH--IVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG-M  128 (325)
T ss_dssp             ----SCCHHHHHHHTC-----CCTT--BCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHH-H
T ss_pred             ----HHHHHHHHHhcC-----CCCC--cCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHH-H
Confidence                012233333222     1222  22333222 2445799999999999998864211  122223444444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+|||++       .+|      +++|+|||++..++.........   .....-.+.+.|.+.. 
T Consensus       129 ~~lH~~~ivH~Dikp~Nil~~-------~~~------~~kl~Dfg~a~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~-  191 (325)
T 3kex_A          129 YYLEEHGMVHRNLAARNVLLK-------SPS------QVQVADFGVADLLPPDDKQLLYS---EAKTPIKWMALESIHF-  191 (325)
T ss_dssp             HHHHHTTCCCSCCSSTTEEES-------SSS------CEEECSCSGGGGSCCCTTCCC--------CCTTTSCHHHHHH-
T ss_pred             HHHHhCCCCCCccchheEEEC-------CCC------eEEECCCCcccccCccccccccc---CCCCcccccChHHhcc-
Confidence            889999999999999999998       667      89999999998765433211100   0011113455555432 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +......|.++|+..+.++++
T Consensus       192 ~~~~~~~Di~slG~~l~el~~  212 (325)
T 3kex_A          192 GKYTHQSDVWSYGVTVWELMT  212 (325)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCChhhHhHHhHHHHHHHHh
Confidence            333345577777777777765

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.50  E-value=2.7e-14  Score=153.64  Aligned_cols=199  Identities=15%  Similarity=0.048  Sum_probs=114.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||.+....        |+.||||+..++..+.                                     
T Consensus        20 ~~~LG~G~~g~V~~~~~~~--------g~~vAvK~~~~~~~~~-------------------------------------   54 (434)
T 2rio_A           20 EKILGYGSSGTVVFQGSFQ--------GRPVAVKRMLIDFCDI-------------------------------------   54 (434)
T ss_dssp             EEEEEECSTTCEEEEEESS--------SSEEEEEEEEGGGHHH-------------------------------------
T ss_pred             cCeEeeCCCeEEEEEEEEC--------CeEEEEEEEcHHHHHH-------------------------------------
Confidence            6789999999998765432        6999999875532111                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcchhh--------HHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAH  438 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~~~~--------~~~la~  438 (581)
                           +.+|.+.+.+.    .++++|  ++.+...  ....+|||||++| +|.+++.........        ...++.
T Consensus        55 -----~~~E~~~l~~l----~~HpnI--v~~~~~~~~~~~~~lv~E~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~  122 (434)
T 2rio_A           55 -----ALMEIKLLTES----DDHPNV--IRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLR  122 (434)
T ss_dssp             -----HHHHHHHHHHH----TTSTTB--CCEEEEEECSSEEEEEECCCSE-EHHHHHHTC------------CCHHHHHH
T ss_pred             -----HHHHHHHHHhc----cCCCCc--CeEEEEEecCCeEEEEEecCCC-CHHHHHhccCCCchhhhhccchhHHHHHH
Confidence                 12233333322    123332  2333222  2334799999986 999998653211110        123444


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ +..||..|++|+|+||+|||++...........-.....++|+|||++..+...... +............+.+
T Consensus       123 qi~~a-L~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~~~~gt~~y~a  200 (434)
T 2rio_A          123 QIASG-VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS-FRTNLNNPSGTSGWRA  200 (434)
T ss_dssp             HHHHH-HHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC---------------CCTTSC
T ss_pred             HHHHH-HHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCcc-ceeeecCCCCCCCccC
Confidence            44444 888999999999999999999832100000000011338999999999987654321 1111122234446778


Q ss_pred             HHHHHhh------cCCCCCCCHHHHHHHHHHhhh
Q 008021          519 AECTLRL------SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       519 ~e~ll~l------~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +|.+...      .......|.++|+..+.++++
T Consensus       201 PE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt  234 (434)
T 2rio_A          201 PELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS  234 (434)
T ss_dssp             HHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             HHHhccccccccccCcchhhhhHhHHHHHHHHHh
Confidence            8877542      234456799999999999987

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.50  E-value=2.8e-14  Score=146.97  Aligned_cols=192  Identities=16%  Similarity=0.118  Sum_probs=109.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  |+ .-..+||||..+.....                                      
T Consensus        20 ~~~lG~G~~g~Vy~~~~~~~--~~-~~~~~vaiK~~~~~~~~--------------------------------------   58 (327)
T 3poz_A           20 IKVLGSGAFGTVYKGLWIPE--GE-KVKIPVAIKELREATSP--------------------------------------   58 (327)
T ss_dssp             EEEEEEETTEEEEEEEECC-------CCEEEEEEEC--------------------------------------------
T ss_pred             ceEEeeCCCeEEEEEEEcCC--Cc-eEEEEEEEeecccccCH--------------------------------------
Confidence            57899999999999998753  20 01134677775433110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l  445 (581)
                      ...-.+.+|+..+.++.     +++  +++.+.-. .....++|||++|++|.+++......  ......++..++.+ +
T Consensus        59 ~~~~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~-l  130 (327)
T 3poz_A           59 KANKEILDEAYVMASVD-----NPH--VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG-M  130 (327)
T ss_dssp             -CHHHHHHHHHHHHHCC-----BTT--BCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHHHHHHHhCC-----CCC--EeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH-H
Confidence            00112445666555442     222  22333221 24467999999999999988653221  11223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.|||++       .++      .++|+|||++..++..........   ....-.+.+.|.+.. 
T Consensus       131 ~~LH~~~ivH~Dikp~NIll~-------~~~------~~kl~Dfg~a~~~~~~~~~~~~~~---~~~t~~y~aPE~~~~-  193 (327)
T 3poz_A          131 NYLEDRRLVHRDLAARNVLVK-------TPQ------HVKITDFGLAKLLGAEEKEYHAEG---GKVPIKWMALESILH-  193 (327)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEE-------ETT------EEEECCTTHHHHHTTTCC----------CCCGGGSCHHHHHH-
T ss_pred             HHHhhCCeeCCCCChheEEEC-------CCC------CEEEccCcceeEccCCcccccccC---CCccccccChHHhcc-
Confidence            889999999999999999998       677      899999999887654332111100   000012344444432 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.|+|+..+.++++
T Consensus       194 ~~~~~~~Di~slG~il~ellt  214 (327)
T 3poz_A          194 RIYTHQSDVWSYGVTVWELMT  214 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCchhhhhhhHHHHHHHHh
Confidence            222334466666666666554

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.50  E-value=1e-13  Score=141.16  Aligned_cols=190  Identities=11%  Similarity=0.105  Sum_probs=116.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...        |+.||||+........                           +..       
T Consensus        33 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~---------------------------~~~-------   70 (313)
T 3cek_A           33 LKQIGSGGSSKVFQVLNEK--------KQIYAIKYVNLEEADN---------------------------QTL-------   70 (313)
T ss_dssp             EEEEECCSSEEEEEEECTT--------CCEEEEEEEECSSCCH---------------------------HHH-------
T ss_pred             EEEecCCCCEEEEEEEcCC--------CcEEEEEEeccccccc---------------------------cch-------
Confidence            4789999999999999854        6899999976542110                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|++.+.++...   .++  +.+.+.  ......++||| +.|.+|.+++..... .......++..++.+ +
T Consensus        71 ---~~~~~E~~~l~~l~~~---~~~--iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a-L  140 (313)
T 3cek_A           71 ---DSYRNEIAYLNKLQQH---SDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEA-V  140 (313)
T ss_dssp             ---HHHHHHHHHHHHHGGG---CTT--BCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhcccc---CCc--eEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence               1234566666555421   122  222222  22334579999 567899998865322 112223445455444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+||+++       . |      .++|+|||++..+.........   ........+.++|.+...
T Consensus       141 ~~LH~~~ivH~dlkp~NIl~~-------~-~------~~kL~Dfg~~~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~  203 (313)
T 3cek_A          141 HTIHQHGIVHSDLKPANFLIV-------D-G------MLKLIDFGIANQMQPDTTSVVK---DSQVGTVNYMPPEAIKDM  203 (313)
T ss_dssp             HHHHHTTCCCCCCCGGGEEEE-------T-T------EEEECCCSSSCC-----------------CCGGGCCHHHHTTC
T ss_pred             HHHHHCCceecCCCcccEEEE-------C-C------eEEEeeccccccccCccccccc---cCCCCCCCcCCHHHHhhc
Confidence            889999999999999999997       3 5      8999999999887654332111   112234456667776542


Q ss_pred             ----------cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 ----------SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ----------~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                                .......|.++|+..+.+++.+
T Consensus       204 ~~~~~~~~~~~~~~~~~Di~slG~il~el~~g  235 (313)
T 3cek_A          204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYG  235 (313)
T ss_dssp             C----------CCCHHHHHHHHHHHHHHHHHS
T ss_pred             ccccccccccccCCchHHHHHHHHHHHHHHhC
Confidence                      1233356899999999998876

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.49  E-value=5.7e-14  Score=141.27  Aligned_cols=189  Identities=15%  Similarity=0.142  Sum_probs=115.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+..+.....                       ..            
T Consensus        27 ~~~lg~G~~g~V~~~~~~~~-------~~~valK~~~~~~~~~-----------------------~~------------   64 (287)
T 2wei_A           27 VCMLGKGSFGEVLKCKDRIT-------QQEYAVKVINKASAKN-----------------------KD------------   64 (287)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEEGGGBSS-----------------------SC------------
T ss_pred             eEEEcCCCCEEEEEEEEcCC-------CcEEEEEEecccccch-----------------------HH------------
Confidence            57899999999999999764       6999999976432110                       00            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-.+.+|.+.+.++     .+++  +++.+.  ......++||||++|.+|.+++..... .......++..++.+ +
T Consensus        65 --~~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~-l  134 (287)
T 2wei_A           65 --TSTILREVELLKKL-----DHPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG-I  134 (287)
T ss_dssp             --HHHHHHHHHHHHTC-----CCTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhc-----cCCC--ccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH-H
Confidence              01233455444433     1222  223332  223455899999999999888754221 122223444444444 7


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|++|.||+++...    .++      .++|+|||++..+.......-      ......+.++|.+.  
T Consensus       135 ~~LH~~~i~H~dl~p~NIlv~~~~----~~~------~~kL~Dfg~~~~~~~~~~~~~------~~~~~~y~aPE~~~--  196 (287)
T 2wei_A          135 TYMHKHNIVHRDLKPENILLESKE----KDC------DIKIIDFGLSTCFQQNTKMKD------RIGTAYYIAPEVLR--  196 (287)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESCSS----TTC------CEEECSTTGGGTBCCCSSCSC------HHHHHTTCCHHHHT--
T ss_pred             HHHHHCCeeccCCChhhEEEecCC----Ccc------cEEEeccCcceeecCCCcccc------ccCcccccChHHhc--
Confidence            889999999999999999997211    223      799999999886644321100      00111234455442  


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +......|.++|+..+.+++.+
T Consensus       197 ~~~~~~~Di~slG~~l~~l~~g  218 (287)
T 2wei_A          197 GTYDEKCDVWSAGVILYILLSG  218 (287)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCchhhHhHHHHHHHHHhC
Confidence            2344456888888888888765

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.49  E-value=3.6e-14  Score=150.61  Aligned_cols=139  Identities=14%  Similarity=-0.025  Sum_probs=92.7

Q ss_pred             cEEEEeccCCccHHHHHHhhh----cchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCC
Q 008021          407 AVLVETYEQGECVSRYVDELQ----GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP  482 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~----~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~  482 (581)
                      .++||||++|..+........    ........++..++.+ +..||..|++|+|+||+|||++   +   .+|      
T Consensus       113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~a-L~~LH~~~ivHrDlkp~Nill~---~---~~~------  179 (394)
T 4e7w_A          113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS-LAYIHSIGICHRDIKPQNLLLD---P---PSG------  179 (394)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEE---T---TTT------
T ss_pred             EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH-HHHHHHCCccCCCCCHHHEEEc---C---CCC------
Confidence            469999999875554332111    1111122344444444 8889999999999999999997   1   355      


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHH
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSA  560 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~  560 (581)
                      .++|+|||++..+.......      ......++.++|.+.....+....|.|+++..+.+++.+.  +......+.+..
T Consensus       180 ~~kL~DFG~a~~~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~  253 (394)
T 4e7w_A          180 VLKLIDFGSAKILIAGEPNV------SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVE  253 (394)
T ss_dssp             EEEECCCTTCEECCTTCCCC------SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             cEEEeeCCCcccccCCCCCc------ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            89999999998764432110      0112345778888866555666789999999999999883  555555566665


Q ss_pred             HHHH
Q 008021          561 CSNY  564 (581)
Q Consensus       561 ~~~~  564 (581)
                      +.+.
T Consensus       254 i~~~  257 (394)
T 4e7w_A          254 IIKV  257 (394)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.49  E-value=4e-14  Score=143.64  Aligned_cols=192  Identities=18%  Similarity=0.189  Sum_probs=102.8

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      +.+|+ .+.||+|++|.||+|+.+.+       |+.||||+.++.....-                              
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~------------------------------   66 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKT-------GHVIAVKQMRRSGNKEE------------------------------   66 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTT-------CCEEEEEEEETTSCHHH------------------------------
T ss_pred             hccccccceeeecCCeeEEEEEEecC-------CeEEEEEEecccccchH------------------------------
Confidence            33444 57899999999999999864       69999999876521100                              


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAH  438 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~  438 (581)
                              +.++..|...+   .... .+++  +++.+.  ......++||||+ |..+..+......  .......++.
T Consensus        67 --------~~~~~~~~~~~---~~~~-~h~~--i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~  131 (318)
T 2dyl_A           67 --------NKRILMDLDVV---LKSH-DCPY--IVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTV  131 (318)
T ss_dssp             --------HHHHHHHHHHH---HHTT-TCTT--BCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHH
T ss_pred             --------HHHHHHHHHHH---HHhc-CCCc--eeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHH
Confidence                    00011111111   1111 2222  223332  2234458999999 6666665543211  1122233444


Q ss_pred             HHHHHHHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          439 IGTHALLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       439 ~~i~a~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      .++.+ +..||. +|++|+|+||.||+++       .++      +++|+|||++..+.......      .......+.
T Consensus       132 ~i~~~-l~~lH~~~~i~H~dlkp~Nil~~-------~~~------~~kl~dfg~~~~~~~~~~~~------~~~~~~~y~  191 (318)
T 2dyl_A          132 AIVKA-LYYLKEKHGVIHRDVKPSNILLD-------ERG------QIKLCDFGISGRLVDDKAKD------RSAGCAAYM  191 (318)
T ss_dssp             HHHHH-HHHHHHHHCCCCCCCCGGGEEEC-------TTS------CEEECCCTTC--------------------CCTTC
T ss_pred             HHHHH-HHHHHhhCCEEeCCCCHHHEEEC-------CCC------CEEEEECCCchhccCCcccc------ccCCCcccc
Confidence            44444 788898 4999999999999998       667      89999999998765433211      111223445


Q ss_pred             HHHHHHh----hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLR----LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~----l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ++|.+..    -.......|.++|+..+.+++.+
T Consensus       192 aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g  225 (318)
T 2dyl_A          192 APERIDPPDPTKPDYDIRADVWSLGISLVELATG  225 (318)
T ss_dssp             CHHHHC--------CCTHHHHHHHHHHHHHHHHS
T ss_pred             ChhhcccccccccCCccccchhhHHHHHHHHHhC
Confidence            5666532    12233456888888888888876

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.49  E-value=9.1e-14  Score=137.31  Aligned_cols=186  Identities=9%  Similarity=0.063  Sum_probs=114.8

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ..|. .+.||+|++|.||+|+..         |+.||||+.+......                           +.   
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~---------~~~~avK~~~~~~~~~---------------------------~~---   50 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ---------GNDIVVKVLKVRDWST---------------------------RK---   50 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET---------TEEEEEEEECCTTCCH---------------------------HH---
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC---------CeeEEEEEecccccCH---------------------------HH---
Confidence            3444 689999999999999984         5899999987642110                           00   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--C--CCcEEEEeccCCccHHHHHHhhhc---chhhHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--V--HPAVLVETYEQGECVSRYVDELQG---HERLKSAL  436 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~--t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~l  436 (581)
                             .-++.+|++.+.++     .+++  +.+.+.-+  .  ...++||||++|++|.+++.....   .......+
T Consensus        51 -------~~~~~~E~~~l~~l-----~h~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i  116 (271)
T 3kmu_A           51 -------SRDFNEECPRLRIF-----SHPN--VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKF  116 (271)
T ss_dssp             -------HHHHHHHGGGGCCC-----SCTT--EECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHH
T ss_pred             -------HHHHHHHHHHHHhc-----CCCc--hhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHH
Confidence                   01133344333222     1222  22222211  1  344899999999999999875322   12222344


Q ss_pred             HHHHHHHHHHHhhhCC--eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          437 AHIGTHALLKMLLVDN--FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G--~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      +..++.+ +..||..|  ++|+|+||.||+++       .+|      .+++.|||+.........          ....
T Consensus       117 ~~qi~~~-l~~lH~~~~~i~H~dikp~Nil~~-------~~~------~~~l~~~~~~~~~~~~~~----------~~t~  172 (271)
T 3kmu_A          117 ALDMARG-MAFLHTLEPLIPRHALNSRSVMID-------EDM------TARISMADVKFSFQSPGR----------MYAP  172 (271)
T ss_dssp             HHHHHHH-HHHHTTSSSCCTTCCCSGGGEEEC-------TTS------CEEEEGGGSCCTTSCTTC----------BSCG
T ss_pred             HHHHHHH-HHHHhcCCCceecCCCccceEEEc-------CCc------ceeEEeccceeeecccCc----------cCCc
Confidence            4444444 88899999  99999999999998       666      778887776554332211          0122


Q ss_pred             HHHHHHHHHhhcCCCC--CCCHHHHHHHHHHhhhH
Q 008021          515 GRTAAECTLRLSKQQN--CPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~--~~D~~~f~~~l~~l~~~  547 (581)
                      .+.++|.+........  ..|.++|+..+.+++.+
T Consensus       173 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  207 (271)
T 3kmu_A          173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTR  207 (271)
T ss_dssp             GGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHC
T ss_pred             cccChhhhccCCCCCCCchhhHHHHHHHHHHHHhC
Confidence            4556666644222211  36888888888888876

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.49  E-value=7.7e-14  Score=139.90  Aligned_cols=153  Identities=17%  Similarity=0.172  Sum_probs=97.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|++..+       ++.||||+.+..-...-...                         .+.     
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~~~~-------------------------~~~-----   66 (287)
T 4f0f_A           24 EKQIGKGGFGLVHKGRLVKD-------KSVVAIKSLILGDSEGETEM-------------------------IEK-----   66 (287)
T ss_dssp             EEECCCCSSSCEEEEEETTT-------CCEEEEEECCCCTTTCCHHH-------------------------HCC-----
T ss_pred             hhccccCCceeEEEEEEcCC-------ceEEEEEEeeccccccchhH-------------------------HHH-----
Confidence            57899999999999999764       79999999866522110000                         000     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                        --++.+|...+.++       .+-.+++.+.-+.....+||||++|.+|.+++.....  .......++..++.+ +.
T Consensus        67 --~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~-l~  136 (287)
T 4f0f_A           67 --FQEFQREVFIMSNL-------NHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG-IE  136 (287)
T ss_dssp             --SHHHHHHHHHHTTC-------CCTTBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHH-HH
T ss_pred             --HHHHHHHHHHHHhC-------CCCCchhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHH-HH
Confidence              01234455444333       1223445555556667899999999999887754221  112223344444443 88


Q ss_pred             HhhhCC--eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          447 MLLVDN--FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       447 ~L~~~G--~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      .||..|  ++|+|+||.||+++       .++ ......++|+|||++....
T Consensus       137 ~lH~~~~~ivH~dikp~Nil~~-------~~~-~~~~~~~kl~Dfg~~~~~~  180 (287)
T 4f0f_A          137 YMQNQNPPIVHRDLRSPNIFLQ-------SLD-ENAPVCAKVADFGLSQQSV  180 (287)
T ss_dssp             HHHTSSSCCBCSCCSGGGEEES-------CCC-TTCSCCEEECCCTTCBCCS
T ss_pred             HHHhCCCCeecCCCCcceEEEe-------ccC-CCCceeEEeCCCCcccccc
Confidence            899999  99999999999998       332 0012259999999886543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.49  E-value=5.6e-14  Score=139.67  Aligned_cols=141  Identities=17%  Similarity=0.148  Sum_probs=94.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+..+.-...                            ..       
T Consensus        12 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~----------------------------~~-------   49 (276)
T 2yex_A           12 VQTLGEGAYGEVQLAVNRVT-------EEAVAVKIVDMKRAVD----------------------------CP-------   49 (276)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------CCEEEEEEEEGGGCTT----------------------------HH-------
T ss_pred             EEEeecCCCcEEEEEEECCC-------CcEEEEEEeeeccchh----------------------------hh-------
Confidence            57899999999999999764       6999999976431100                            00       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -.+.+|...+.++     .+++  +++.+..  .....++||||++|.+|.+++..... .......++..++.+ +
T Consensus        50 ---~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~-l  118 (276)
T 2yex_A           50 ---ENIKKEICINKML-----NHEN--VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-V  118 (276)
T ss_dssp             ---HHHHHHHHHHHTC-----CCTT--BCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhc-----CCCC--ceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHH-H
Confidence               1123344433322     1222  3333322  22345799999999999988753211 112223444444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEeccccccc
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL  495 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L  495 (581)
                      ..||..|++|+|+||.||+++       .+|      .++|+|||++..+
T Consensus       119 ~~lH~~~i~H~dl~p~Nil~~-------~~~------~~kl~dfg~~~~~  155 (276)
T 2yex_A          119 VYLHGIGITHRDIKPENLLLD-------ERD------NLKISDFGLATVF  155 (276)
T ss_dssp             HHHHHTTEECSCCSGGGEEEC-------TTC------CEEECCCTTCEEC
T ss_pred             HHHHhCCeeccCCChHHEEEc-------cCC------CEEEeeCCCcccc
Confidence            889999999999999999998       667      8999999998754

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.49  E-value=1.8e-14  Score=154.03  Aligned_cols=117  Identities=11%  Similarity=0.029  Sum_probs=73.4

Q ss_pred             cEEEEeccCCccHHHHHHhhhc----chh----hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeeccccccccccc
Q 008021          407 AVLVETYEQGECVSRYVDELQG----HER----LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF  478 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~----~~~----~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~  478 (581)
                      .+++|++. +.+|.++++....    ...    ....++..++.+ +..||..|++|||+||.|||++       .+|  
T Consensus       180 ~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~a-L~~LH~~~iiHrDiKp~NILl~-------~~~--  248 (413)
T 3dzo_A          180 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL-LASLHHYGLVHTYLRPVDIVLD-------QRG--  248 (413)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHH-HHHHHHTTEECSCCCGGGEEEC-------TTC--
T ss_pred             eEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHH-HHHHHhCCcccCCcccceEEEe-------cCC--
Confidence            45677765 5688888753211    111    112233333433 8889999999999999999999       777  


Q ss_pred             CCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc---------CCCCCCCHHHHHHHHHHhhhH
Q 008021          479 RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS---------KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       479 ~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~---------~~~~~~D~~~f~~~l~~l~~~  547 (581)
                          .++|+|||++...+.....        . .+-.+.++|.+....         ......|.|+|+..+.+++.+
T Consensus       249 ----~~kL~DFG~a~~~~~~~~~--------~-~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg  313 (413)
T 3dzo_A          249 ----GVFLTGFEHLVRDGASAVS--------P-IGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA  313 (413)
T ss_dssp             ----CEEECCGGGCEETTEEECC--------C-CCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred             ----eEEEEeccceeecCCcccc--------C-CCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence                8999999998765543100        0 113455566554221         122345777777777777765

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.48  E-value=2.4e-13  Score=154.23  Aligned_cols=190  Identities=15%  Similarity=0.110  Sum_probs=120.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  +  ..+..||||+.+......                            .        
T Consensus       395 ~~~LG~G~fG~Vy~a~~~~~--~--~~~~~vaiK~~~~~~~~~----------------------------~--------  434 (656)
T 2j0j_A          395 GRCIGEGQFGDVHQGIYMSP--E--NPAMAVAIKTCKNCTSDS----------------------------V--------  434 (656)
T ss_dssp             EEEEECCSSCCEEEEEECCS--S--SCCEEEEEEECSSTTCHH----------------------------H--------
T ss_pred             eeEEeeCCCEEEEEEEEecC--C--CccEEEEEEEecccCCHH----------------------------H--------
Confidence            47899999999999998653  1  125789999876532111                            0        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                        .-.|.+|+..+.++     .++++  ++.+.-. ....++||||++|++|.+++.....  .......++..++.+ +
T Consensus       435 --~~~~~~E~~~l~~l-----~HpnI--v~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~a-L  504 (656)
T 2j0j_A          435 --REKFLQEALTMRQF-----DHPHI--VKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA-L  504 (656)
T ss_dssp             --HHHHHHHHHHHHHC-----CCTTB--CCEEEEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCCC--CeEEEEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH-H
Confidence              01234555555443     12322  2222211 2346899999999999999864321  111222344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||.|||++       .+|      .++|+|||++..+.+.......    .....-.+.++|.+.. 
T Consensus       505 ~~LH~~givHrDikp~NILl~-------~~~------~vkL~DFG~a~~~~~~~~~~~~----~~~~t~~y~aPE~~~~-  566 (656)
T 2j0j_A          505 AYLESKRFVHRDIAARNVLVS-------SND------CVKLGDFGLSRYMEDSTYYKAS----KGKLPIKWMAPESINF-  566 (656)
T ss_dssp             HHHHHTTCCCSCCSGGGEEEE-------ETT------EEEECCCCCCCSCCC--------------CCGGGCCHHHHHH-
T ss_pred             HHHHhCCccccccchHhEEEe-------CCC------CEEEEecCCCeecCCCcceecc----CCCCCcceeCHHHhcC-
Confidence            889999999999999999999       677      9999999999887654321110    0001124566776643 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.|+|+..+.+++.
T Consensus       567 ~~~~~~~DiwSlG~il~ellt  587 (656)
T 2j0j_A          567 RRFTSASDVWMFGVCMWEILM  587 (656)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCchhhHHHHHHHHHHHHH
Confidence            344456799999999999875

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.47  E-value=3e-14  Score=147.77  Aligned_cols=206  Identities=13%  Similarity=0.067  Sum_probs=114.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  +  ..++.||||+....-. ....+..+++.+.                         
T Consensus        42 ~~~lg~G~~g~Vy~~~~~~~--~--~~~~~~aiK~~~~~~~-~~~~e~~~~~~~~-------------------------   91 (345)
T 2v62_A           42 GKKIGSGGFGLIYLAFPTNK--P--EKDARHVVKVEYQENG-PLFSELKFYQRVA-------------------------   91 (345)
T ss_dssp             EEEC------CEEEEEESSS--C--GGGCCEEEEEEECC-C-HHHHHHHHHHHHC-------------------------
T ss_pred             EeeEeecCCeEEEEEEecCC--C--CccceEEEEeeecCCc-chHHHHHHHHHHh-------------------------
Confidence            57899999999999999751  0  1168999999876622 2223333322210                         


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC------CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL------VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l------~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                        .-++.+|...+..+     .++  .+++.+...      ....++||||+ |.+|.+++..... .......++..++
T Consensus        92 --~~~~~~e~~~~~~l-----~h~--ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~  161 (345)
T 2v62_A           92 --KKDCIKKWIERKQL-----DYL--GIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRML  161 (345)
T ss_dssp             --CHHHHHHHHHHHTC-----SCC--CCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHH
T ss_pred             --hhHHHHHHHhhccc-----ccc--CcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHH
Confidence              01222333333211     122  233433221      23458999999 9999998754321 1222234444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHH--HHHHHHHhhcHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV--EFFKAVARRDGRTAA  519 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~--~l~~Al~~~D~~~~~  519 (581)
                      .+ +..||..|++|+|+||.|||++       .++    ...++|+|||++..+.+.......  .........-.+.++
T Consensus       162 ~a-L~~LH~~~ivH~Dlkp~NIll~-------~~~----~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  229 (345)
T 2v62_A          162 DV-LEYIHENEYVHGDIKAANLLLG-------YKN----PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSL  229 (345)
T ss_dssp             HH-HHHHHHTTEECSCCSGGGEEEE-------SSS----TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCH
T ss_pred             HH-HHHHHhCCeeCCCcCHHHEEEc-------cCC----CCcEEEEeCCCceecccccccccchhccccccCCCccccCH
Confidence            44 8889999999999999999998       222    127999999999876543210000  000000111234556


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+.. .......|.|+|+..+.+++.+
T Consensus       230 E~~~~-~~~~~~~Di~slG~il~ell~g  256 (345)
T 2v62_A          230 DAHKG-VALSRRSDVEILGYCMLRWLCG  256 (345)
T ss_dssp             HHHHT-CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             HHhcC-CCCCchhhHHHHHHHHHHHHhC
Confidence            65543 2334466889999999988876

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.47  E-value=1.1e-14  Score=165.46  Aligned_cols=141  Identities=17%  Similarity=0.137  Sum_probs=88.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+++..      .|+.||||+..+.-..                            +.        
T Consensus        85 ~~~lg~G~~g~Vy~a~~~~~------~~~~vaiK~~~~~~~~----------------------------~~--------  122 (681)
T 2pzi_A           85 KGCIAHGGLGWIYLALDRNV------NGRPVVLKGLVHSGDA----------------------------EA--------  122 (681)
T ss_dssp             EEEEEEETTEEEEEEEEGGG------TTEEEEEEESCSSCCH----------------------------HH--------
T ss_pred             EEEEeeCCCeEEEEEEEcCC------CCcEEEEEEeCccCCH----------------------------HH--------
Confidence            57899999999999998751      1699999987653111                            00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CC-----cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HP-----AVLVETYEQGECVSRYVDELQGHERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~-----~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i  441 (581)
                        .-.+.+|++.+.++     .+++  +++.+.-..  ..     .+|||||++|.+|.+++.. .........++..++
T Consensus       123 --~~~~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~-~l~~~~~~~~~~qi~  192 (681)
T 2pzi_A          123 --QAMAMAERQFLAEV-----VHPS--IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ-KLPVAEAIAYLLEIL  192 (681)
T ss_dssp             --HHHHHHHHGGGGGC-----CCTT--BCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C-CCCHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhc-----CCCC--cCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC-CCCHHHHHHHHHHHH
Confidence              01123344333222     1222  333332111  11     3899999999999987654 222222234444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      .+ +..+|..|++|+|+||+|||++       . +      +++|+|||++..++
T Consensus       193 ~a-L~~lH~~giiHrDlkp~NIll~-------~-~------~~kl~DFG~a~~~~  232 (681)
T 2pzi_A          193 PA-LSYLHSIGLVYNDLKPENIMLT-------E-E------QLKLIDLGAVSRIN  232 (681)
T ss_dssp             HH-HHHHHHTTEECCCCSGGGEEEC-------S-S------CEEECCCTTCEETT
T ss_pred             HH-HHHHHHCCCeecccChHHeEEe-------C-C------cEEEEecccchhcc
Confidence            44 8889999999999999999998       3 3      69999999987654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.46  E-value=4.5e-14  Score=142.06  Aligned_cols=186  Identities=15%  Similarity=0.096  Sum_probs=111.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|....+       +..||||+........                           +..       
T Consensus        31 ~~~lg~G~~g~Vy~~~~~~~-------~~~va~k~~~~~~~~~---------------------------~~~-------   69 (290)
T 1t4h_A           31 DIEIGRGSFKTVYKGLDTET-------TVEVAWCELQDRKLTK---------------------------SER-------   69 (290)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEEGGGSCH---------------------------HHH-------
T ss_pred             eeeccCCCCeEEEEeEecCC-------ceEEEEEEecchhhCH---------------------------HHH-------
Confidence            35799999999999999764       7999999876431100                           000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC------CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL------VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l------~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                         -.+.+|+..+.++     .+++  +++.+..+      ....++||||++|.+|.+++..... .......++..++
T Consensus        70 ---~~~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~  139 (290)
T 1t4h_A           70 ---QRFKEEAEMLKGL-----QHPN--IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQIL  139 (290)
T ss_dssp             ---HHHHHHHHHHTTC-----CCTT--BCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhC-----CCCC--eeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHH
Confidence               1223444444332     1222  22332211      1224799999999999999865322 1222233444444


Q ss_pred             HHHHHHhhhCC--eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          442 HALLKMLLVDN--FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       442 ~a~l~~L~~~G--~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      .+ +..||..|  ++|+|+||.||+++.      .++      .++|+|||++...........       .....+.++
T Consensus       140 ~~-l~~lH~~~~~i~H~dikp~Nil~~~------~~~------~~kl~Dfg~~~~~~~~~~~~~-------~~t~~y~aP  199 (290)
T 1t4h_A          140 KG-LQFLHTRTPPIIHRDLKCDNIFITG------PTG------SVKIGDLGLATLKRASFAKAV-------IGTPEFMAP  199 (290)
T ss_dssp             HH-HHHHHTSSSCCCCSCCCGGGEEESS------TTS------CEEECCTTGGGGCCTTSBEES-------CSSCCCCCG
T ss_pred             HH-HHHHHcCCCCEEECCCCHHHEEEEC------CCC------CEEEeeCCCcccccccccccc-------cCCcCcCCH
Confidence            44 88899999  999999999999961      345      899999999865443321110       011122333


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+.  +......|.++++..+.+++.+
T Consensus       200 E~~~--~~~~~~~Di~slG~~l~~l~~g  225 (290)
T 1t4h_A          200 EMYE--EKYDESVDVYAFGMCMLEMATS  225 (290)
T ss_dssp             GGGG--TCCCTHHHHHHHHHHHHHHHHS
T ss_pred             HHHh--ccCCCcchHHHHHHHHHHHHhC
Confidence            3221  2233445777777777777665

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.46  E-value=1.5e-13  Score=138.81  Aligned_cols=148  Identities=18%  Similarity=0.206  Sum_probs=94.1

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ..+. .+.||+|++|.||+|....+       |+.||||+.+......                 .+             
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~-------~~~~avK~~~~~~~~~-----------------~~-------------   47 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSET-------LCRRAVKILKKKKLRR-----------------IP-------------   47 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTT-------CCEEEEEEECHHHHHH-----------------ST-------------
T ss_pred             cceeEeeEEecCCCeEEEEEEECCC-------CcEEEEEEeccccccc-----------------cc-------------
Confidence            3444 68999999999999998765       7999999865421000                 00             


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc----cCCCCcEEEEeccCCccHHHHHHhhhcc---hhhHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY----PLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSAL  436 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~----~l~t~~VLVmEyi~G~~L~~~l~~~~~~---~~~~~~l  436 (581)
                           ..+-.+.+|.+.+.++    . +++  +.+.+.    +.....++||||++|. +.+++......   ......+
T Consensus        48 -----~~~~~~~~E~~~l~~l----~-h~~--i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~  114 (305)
T 2wtk_C           48 -----NGEANVKKEIQLLRRL----R-HKN--VIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGY  114 (305)
T ss_dssp             -----THHHHHHHHHHHHTTC----C-CTT--BCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHH
T ss_pred             -----hhHHHHHHHHHHHHhc----C-CCC--eeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHH
Confidence                 0112344555554433    1 222  223222    1223458999999987 66665442211   1122334


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      +..++.+ +..||..|++|+|+||.||+++       .+|      .++|+|||++..+.
T Consensus       115 ~~qi~~a-l~~LH~~~i~H~dlkp~NIl~~-------~~~------~~kl~dfg~~~~~~  160 (305)
T 2wtk_C          115 FCQLIDG-LEYLHSQGIVHKDIKPGNLLLT-------TGG------TLKISALGVAEALH  160 (305)
T ss_dssp             HHHHHHH-HHHHHHTTEECSCCSGGGEEEC-------TTC------CEEECCCTTCEECC
T ss_pred             HHHHHHH-HHHHHHCCeeecCCCcccEEEc-------CCC------cEEeeccccccccC
Confidence            4444443 8889999999999999999998       667      89999999987654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.45  E-value=5.3e-15  Score=152.55  Aligned_cols=161  Identities=12%  Similarity=0.127  Sum_probs=97.0

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ..|. .+.||+|++|.||+|+. .        |+.||||+.+.........            ...............  
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~-~--------~~~vavK~~~~~~~~~~~~------------~~~~~~~~~~~~~~~--   87 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK-D--------NKFYALKKYEKSLLEKKRD------------FTKSNNDKISIKSKY--   87 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE-T--------TEEEEEEEEEHHHHSSCEE------------ECCCSSSSCCEEEHH--
T ss_pred             CceEEEEEEcCCCCeEEEEEEc-C--------CceEEEEEeecccccchhh------------hccccchhhhHHhHH--
Confidence            3444 57899999999999998 3        6999999976431100000            000000000000111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHH------HHhh---hcchhh
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRY------VDEL---QGHERL  432 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~------l~~~---~~~~~~  432 (581)
                              -.+.+|.+.+.++.     ++++  ++.+.  ......++||||++|.+|.++      +...   ......
T Consensus        88 --------~~~~~E~~~l~~l~-----h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~  152 (348)
T 2pml_X           88 --------DDFKNELQIITDIK-----NEYC--LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV  152 (348)
T ss_dssp             --------HHHHHHHHHHTTCC-----CTTB--CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHH
T ss_pred             --------HHHHHHHHHHHhCC-----CCCc--ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHH
Confidence                    12345555554331     2332  23222  223456899999999999987      4321   111122


Q ss_pred             HHHHHHHHHHHHHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          433 KSALAHIGTHALLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       433 ~~~la~~~i~a~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      ...++..++.+ +..||. .|++|+|+||+||+++       .++      +++|+|||++..+..
T Consensus       153 ~~~i~~qi~~~-l~~lH~~~~i~H~dl~p~Nil~~-------~~~------~~kl~dfg~~~~~~~  204 (348)
T 2pml_X          153 IKCIIKSVLNS-FSYIHNEKNICHRDVKPSNILMD-------KNG------RVKLSDFGESEYMVD  204 (348)
T ss_dssp             HHHHHHHHHHH-HHHHHHTSCEECCCCCGGGEEEC-------TTS------CEEECCCTTCEECBT
T ss_pred             HHHHHHHHHHH-HHHHhccCCEeecCCChHhEEEc-------CCC------cEEEecccccccccc
Confidence            23344444444 788998 9999999999999998       667      899999999876543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.45  E-value=4.1e-13  Score=134.48  Aligned_cols=147  Identities=22%  Similarity=0.260  Sum_probs=89.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+ +|   .+..||||+.++.....                          .+.        
T Consensus        23 ~~~lg~G~~g~Vy~~~~~~~-~~---~~~~vavK~~~~~~~~~--------------------------~~~--------   64 (291)
T 1u46_A           23 LEKLGDGSFGVVRRGEWDAP-SG---KTVSVAVKCLKPDVLSQ--------------------------PEA--------   64 (291)
T ss_dssp             EEECC----CCCEEEEEECT-TS---CEEEEEEEC----------------------------------CHH--------
T ss_pred             eeeecCCCceeEEEEEeccC-CC---ceeEEEEEEEccCccCC--------------------------HHH--------
Confidence            57899999999999997542 11   13579999877642110                          000        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|.+.+.++     .+++  +++.+.-. ....++||||++|.+|.+++.....  .......++..++.+ +
T Consensus        65 --~~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~-l  134 (291)
T 1u46_A           65 --MDDFIREVNAMHSL-----DHRN--LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG-M  134 (291)
T ss_dssp             --HHHHHHHHHHHHHC-----CCTT--BCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--cccEEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHH-H
Confidence              11234555555443     1222  22333222 2346799999999999998865321  112223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      ..+|..|++|+|+||.||+++       .++      .++|+|||++..+.
T Consensus       135 ~~lH~~~i~H~dikp~Nili~-------~~~------~~kl~Dfg~~~~~~  172 (291)
T 1u46_A          135 GYLESKRFIHRDLAARNLLLA-------TRD------LVKIGDFGLMRALP  172 (291)
T ss_dssp             HHHHHTTEECSCCCGGGEEEE-------ETT------EEEECCCTTCEECC
T ss_pred             HHHHhCCcccCCCchheEEEc-------CCC------CEEEcccccccccc
Confidence            889999999999999999998       667      89999999987654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.45  E-value=2.3e-13  Score=140.45  Aligned_cols=192  Identities=16%  Similarity=0.123  Sum_probs=105.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+...+  |+ .-..+||+|..+.......                                    
T Consensus        20 ~~~lG~G~~g~Vy~~~~~~~--~~-~~~~kv~iK~~~~~~~~~~------------------------------------   60 (327)
T 3lzb_A           20 IKVLGSGAFGTVYKGLWIPE--GE-KVKIPVAIKELREATSPKA------------------------------------   60 (327)
T ss_dssp             EEEEEECSSEEEEEEEECCT--TC-SCCEEEEEEEECCCSSCCC------------------------------------
T ss_pred             EEEeeeCCCeEEEEEEEcCC--Cc-eEEEEEEEEeeccccCHHH------------------------------------
Confidence            57999999999999998764  20 0012457776554321100                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l  445 (581)
                        +-.+.+|+..+.++     .+++  +++.+.-. .....++|||++|.+|.+++......  ......++..++.+ +
T Consensus        61 --~~~~~~E~~~l~~l-----~hp~--iv~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~a-L  130 (327)
T 3lzb_A           61 --NKEILDEAYVMASV-----DNPH--VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG-M  130 (327)
T ss_dssp             --HHHHHHHHHHHTTC-----CBTT--BCCCCEEEESSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCC--eeEEEEEEecCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH-H
Confidence              01123454444332     1222  22333211 34467999999999999998653221  12223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|+|+||+|||++       .++      .++|+|||++..+...........   ....-.+.++|.+.. 
T Consensus       131 ~~LH~~~ivH~Dikp~NIl~~-------~~~------~~kL~DfG~a~~~~~~~~~~~~~~---~~~t~~y~aPE~~~~-  193 (327)
T 3lzb_A          131 NYLEDRRLVHRDLAARNVLVK-------TPQ------HVKITDFGLAKLLGAEEKEYHAEG---GKVPIKWMALESILH-  193 (327)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEE-------ETT------EEEECCTTC-------------------CCCGGGSCHHHHHH-
T ss_pred             HHHhhCCCcCCCCCHHHEEEc-------CCC------CEEEccCcceeEccCccccccccC---CCccccccCHHHHcC-
Confidence            889999999999999999998       667      899999999987654432211100   000012444554433 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .......|.|+|+..+.+++.
T Consensus       194 ~~~~~~~Di~slG~il~ell~  214 (327)
T 3lzb_A          194 RIYTHQSDVWSYGVTVWELMT  214 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCChHHHHHHHHHHHHHHHH
Confidence            223334566666666666655

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.42  E-value=9.9e-14  Score=149.53  Aligned_cols=190  Identities=16%  Similarity=0.093  Sum_probs=109.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+|+......        |+.||||+..++......+++.+++                            
T Consensus        29 ~~~LG~G~~G~V~~~~~~~--------~~~vAvK~~~~~~~~~~~~E~~~l~----------------------------   72 (432)
T 3p23_A           29 KDVLGHGAEGTIVYRGMFD--------NRDVAVKRILPECFSFADREVQLLR----------------------------   72 (432)
T ss_dssp             EEEEEECGGGCEEEEEESS--------SSEEEEEEECTTTEEECHHHHHHHH----------------------------
T ss_pred             CCeeecCcCEEEEEEEEeC--------CeEEEEEEECHHHHHHHHHHHHHHH----------------------------
Confidence            5789999999965433332        6899999987764333332222222                            


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                                    +    ...+++|.  +.+..  .....+|||||++| +|.+++......  ......++..++.+ 
T Consensus        73 --------------~----l~~HpnIv--~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~a-  130 (432)
T 3p23_A           73 --------------E----SDEHPNVI--RYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSG-  130 (432)
T ss_dssp             --------------H----SCCCTTBC--CEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHH-
T ss_pred             --------------h----ccCCCCcC--eEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHH-
Confidence                          1    11223322  22221  12334799999987 898888643211  11223455555544 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|+|+||+|||+...+    .++    ..+++|+|||++..+....... .. .........+.++|.+..
T Consensus       131 L~~LH~~~ivHrDlKp~NIll~~~~----~~~----~~~~kL~DFG~a~~~~~~~~~~-~~-~~~~~gt~~y~APE~l~~  200 (432)
T 3p23_A          131 LAHLHSLNIVHRDLKPHNILISMPN----AHG----KIKAMISDFGLCKKLAVGRHSF-SR-RSGVPGTEGWIAPEMLSE  200 (432)
T ss_dssp             HHHHHHTTCCCCCCSTTSEEECCCB----TTT----BCCEEECCTTEEECC--------------CCSCTTSCCGGGTSC
T ss_pred             HHHHHHCcCEeCCCCHHHEEEecCC----CCC----ceeEEEecccceeeccCCCcce-ee-ccccCCCcCccChhhhhc
Confidence            8889999999999999999997211    122    2378899999998876442111 00 011112234456665543


Q ss_pred             h--cCCCCCCCHHHHHHHHHHhhh
Q 008021          525 L--SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l--~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .  .......|.|+|+..+.+++.
T Consensus       201 ~~~~~~t~~~DiwSlG~il~ellt  224 (432)
T 3p23_A          201 DCKENPTYTVDIFSAGCVFYYVIS  224 (432)
T ss_dssp             C---CCCTHHHHHHHHHHHHHHHT
T ss_pred             ccccCCCcHHHHHHHHHHHHHHHc
Confidence            1  222235699999999999887

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.40  E-value=3.9e-14  Score=143.99  Aligned_cols=128  Identities=13%  Similarity=0.086  Sum_probs=77.0

Q ss_pred             CCcEEEEeccCCccHHHHHHhhh--cchhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCC
Q 008021          405 HPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP  482 (581)
Q Consensus       405 t~~VLVmEyi~G~~L~~~l~~~~--~~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~  482 (581)
                      ...++||||++|.+|.+++....  ........++..++.+ +..||..|++|+|+||.||+++        +|      
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~a-l~~lH~~~i~H~dlkp~NIl~~--------~~------  166 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG-MGYLHAKGILHKDLKSKNVFYD--------NG------  166 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHH-HHHHHHTTCCCCCCCSTTEEEC----------------
T ss_pred             CceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHHHHhCCccccCCChhhEEEe--------CC------
Confidence            34589999999999999986422  1122233455555444 8889999999999999999997        24      


Q ss_pred             eEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc--------CCCCCCCHHHHHHHHHHhhhH
Q 008021          483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS--------KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       483 ~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~--------~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .++|+|||++..........-..........-.+.++|.+....        ......|.++|+..+.+++.+
T Consensus       167 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g  239 (319)
T 2y4i_B          167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR  239 (319)
T ss_dssp             CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhC
Confidence            79999999976543221110000000000111345666654322        122345888888888888876

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.36  E-value=8.3e-13  Score=149.87  Aligned_cols=197  Identities=18%  Similarity=0.181  Sum_probs=115.6

Q ss_pred             hhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHH
Q 008021          283 IFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV  361 (581)
Q Consensus       283 iF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v  361 (581)
                      .+..|. .+.||+|++|.||+|....+       |+.||||+.++.....                              
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~t-------g~~VAVKvi~~~~~~~------------------------------   54 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDT-------GEQVAIKQCRQELSPK------------------------------   54 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTT-------TCCEEECCCCSCCCHH------------------------------
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCC-------CcEEEEEEecccCCHH------------------------------
Confidence            334455 67899999999999998764       7999999977653211                              


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcc-c---ccccccC--CCCcEEEEeccCCccHHHHHHhhhc----chh
Q 008021          362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS-F---PKPVYPL--VHPAVLVETYEQGECVSRYVDELQG----HER  431 (581)
Q Consensus       362 ~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~-v---P~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~----~~~  431 (581)
                              ..-++.+|++.+.++.     ++++. +   +......  ....++||||++|++|.+++.....    ...
T Consensus        55 --------~~~~~~~Ei~iL~~L~-----HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~  121 (676)
T 3qa8_A           55 --------NRERWCLEIQIMKKLN-----HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG  121 (676)
T ss_dssp             --------HHHHHHHHHHHHHHCC-----BTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSS
T ss_pred             --------HHHHHHHHHHHHHhCC-----CCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHH
Confidence                    0112345655555441     23221 1   1111111  3445899999999999999865321    112


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ....++..++.+ +..||..|++|+|+||+||+++       .+|   ....++|+|||++..++......      ...
T Consensus       122 ~i~~I~~QLl~a-L~yLHs~gIVHrDLKP~NILl~-------~~g---~~~~vKL~DFG~a~~~~~~~~~~------~~~  184 (676)
T 3qa8_A          122 PIRTLLSDISSA-LRYLHENRIIHRDLKPENIVLQ-------PGP---QRLIHKIIDLGYAKELDQGELCT------EFV  184 (676)
T ss_dssp             HHHHHHHHHHHH-HHHHHHTTBCCCCCCSTTEEEE-------CCS---SSCEEEECSCCCCCBTTSCCCCC------CCC
T ss_pred             HHHHHHHHHHHH-HHHHHHCCCccCCCCHHHeEee-------cCC---CceeEEEcccccccccccccccc------ccc
Confidence            223455554444 8889999999999999999998       333   12359999999998764432100      000


Q ss_pred             hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          512 RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....+.++|.+. -.......|.++|+..+.+++.+
T Consensus       185 gt~~Y~APE~l~-~~~~s~ksDIwSLGviLyeLltG  219 (676)
T 3qa8_A          185 GTLQYLAPELLE-QKKYTVTVDYWSFGTLAFECITG  219 (676)
T ss_dssp             SCCTTCSSCSSC-CSCCSTTHHHHHHHHHHHHHHSS
T ss_pred             CCcccCChHHhc-cCCCCchhHHHHHHHHHHHHHHC
Confidence            111222333221 12233345777777777776655

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.30  E-value=1.8e-11  Score=120.04  Aligned_cols=92  Identities=23%  Similarity=0.108  Sum_probs=61.2

Q ss_pred             HHhCCChhhhhccCCceeec-ccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccc
Q 008021          274 RAFGRRLSEIFDGFEEAPVA-SGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAV  352 (581)
Q Consensus       274 ~elG~~~~eiF~~fd~~PIg-sGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l  352 (581)
                      .++...+.+.+..++-+|++ .|+.++||+....+        |+.++||+.+++...                      
T Consensus         9 ~~~p~~l~~~~~~~~~~~~~~gg~~~~v~~~~~~~--------g~~~vlK~~~~~~~~----------------------   58 (264)
T 1nd4_A            9 AGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQG--------RPVLFVKTDLSGALN----------------------   58 (264)
T ss_dssp             -CCCGGGTTTTTTCEEEECSCTTSSCEEEEEECTT--------SCCEEEEEECSCTTS----------------------
T ss_pred             ccCCHHHHHhcCCCceEecccCCCCceEEEEecCC--------CCeEEEEeCCcccch----------------------
Confidence            33444456666667778887 66679999997643        578999997654111                      


Q ss_pred             cccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHH
Q 008021          353 KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVS  420 (581)
Q Consensus       353 ~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~  420 (581)
                                          ++..|++.+..+..     .++.+|+++....  ...++||||++|.++.
T Consensus        59 --------------------~~~~E~~~l~~l~~-----~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           59 --------------------ELQDEAARLSWLAT-----TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             --------------------CHHHHHHHHHHHHT-----TTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             --------------------hhhHHHHHHHHHHh-----CCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence                                23456666655543     1566888775433  3459999999999985

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.20  E-value=1.8e-10  Score=114.29  Aligned_cols=80  Identities=15%  Similarity=0.005  Sum_probs=54.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      ....+.||.++||++...         |+.+++|+.+++....                                     
T Consensus        19 ~~~~~g~s~~~v~~~~~~---------~~~~vlK~~~~~~~~~-------------------------------------   52 (263)
T 3tm0_A           19 VKDTEGMSPAKVYKLVGE---------NENLYLKMTDSRYKGT-------------------------------------   52 (263)
T ss_dssp             EECCSCCSSSEEEEEECS---------SCEEEEEEECGGGTTS-------------------------------------
T ss_pred             EeeccCCCCCeEEEEECC---------CCcEEEEeCCcccCCC-------------------------------------
Confidence            345677888999999753         4799999987531100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRY  422 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~  422 (581)
                        .-++.+|++.++.+..      .+.+|+++...  ....++||||++|.++.+.
T Consensus        53 --~~~~~~E~~~l~~l~~------~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~  100 (263)
T 3tm0_A           53 --TYDVEREKDMMLWLEG------KLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             --TTCHHHHHHHHHHHTT------TSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             --HHHHHHHHHHHHHHhc------CCCCCeEEEEEecCCceEEEEEecCCeehhhc
Confidence              0124567766665532      36688887433  3456799999999999875

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.99  E-value=5.8e-09  Score=103.68  Aligned_cols=85  Identities=18%  Similarity=0.114  Sum_probs=55.7

Q ss_pred             hccCCceeecccce-eEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFEEAPVASGSI-AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd~~PIgsGSi-gQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      ...++-+++..|.- +.||+-....   |    +..++||+..++...                                
T Consensus        24 l~g~~~~~~~~G~S~~~v~rl~~~~---~----~~~~~lk~~~~~~~~--------------------------------   64 (272)
T 4gkh_A           24 LYGYRWARDNVGQSGATIYRLYGKP---N----APELFLKHGKGSVAN--------------------------------   64 (272)
T ss_dssp             HTTCEEEEEECSSSSCEEEEEECCT---T----CCCEEEEEEETHHHH--------------------------------
T ss_pred             ccCCeEEEccCCCcCCeEEEEEecC---C----CeEEEEEECCCCCHh--------------------------------
Confidence            33344566666644 4799987754   2    688999998776221                                


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYV  423 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l  423 (581)
                                ++..|++.+..+.      ..+.+|+++.-  .....++|||+++|.++.+..
T Consensus        65 ----------~~~~E~~~l~~l~------~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~  111 (272)
T 4gkh_A           65 ----------DVTDEMVRLNWLT------AFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVL  111 (272)
T ss_dssp             ----------HHHHHHHHHHHHT------TTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHH
T ss_pred             ----------HHHHHHHHHHHhc------cCCCcCeEEEEEEECCeEEEEEEeeCCccccccc
Confidence                      2344665555442      24778988753  234568999999999987754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.95  E-value=1.9e-09  Score=112.33  Aligned_cols=104  Identities=9%  Similarity=0.009  Sum_probs=66.1

Q ss_pred             CCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEec--CCchhhHHHHHHH
Q 008021          261 PEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH--PGVGESIRRDFVI  338 (581)
Q Consensus       261 pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~--P~v~~~i~~Dl~i  338 (581)
                      ++.+.+.+.+.+.+.++.. .   ...+-++++.|....||+.+..         +..+++|+.+  |+...        
T Consensus        19 ~~ld~~~l~~~l~~~~~~~-~---~~~~~~~l~~G~sn~~y~v~~~---------~~~~vlr~~~~p~~~~~--------   77 (359)
T 3dxp_A           19 QRFDTEALEAWMRQHVEGF-A---GPLSVEQFKGGQSNPTFKLVTP---------GQTYVMRAKPGPKSKLL--------   77 (359)
T ss_dssp             -CCCHHHHHHHHHHHSTTC-C---CCCEEEECCC-CCSCEEEEECS---------SCEEEEECCCC--------------
T ss_pred             cCCCHHHHHHHHHHhCCCC-C---CCceEEEcCCcccceEEEEEEC---------CceEEEEeCCCCCCCCC--------
Confidence            4567777888888876431 1   1235689999999999998864         3689999876  55210        


Q ss_pred             HHHHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCC-----CcEEEEec
Q 008021          339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH-----PAVLVETY  413 (581)
Q Consensus       339 l~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t-----~~VLVmEy  413 (581)
                                                    ...-++.+|++.+..+.+     .++.+|+++.....     ..++||||
T Consensus        78 ------------------------------~~~~~~~~E~~~l~~L~~-----~~vpvP~~~~~~~~~~~~g~~~~vme~  122 (359)
T 3dxp_A           78 ------------------------------PSAHAIEREYRVMDALAG-----TDVPVAKMYALCEDESVIGRAFYIMEF  122 (359)
T ss_dssp             ----------------------------------CHHHHHHHHHHHTT-----SSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred             ------------------------------CcHHHHHHHHHHHHHhhc-----CCCCCCcEEEECCCCCccCCeEEEEEe
Confidence                                          011234556666665542     35778888854333     36899999


Q ss_pred             cCCccHH
Q 008021          414 EQGECVS  420 (581)
Q Consensus       414 i~G~~L~  420 (581)
                      ++|.++.
T Consensus       123 v~G~~l~  129 (359)
T 3dxp_A          123 VSGRVLW  129 (359)
T ss_dssp             CCCBCCC
T ss_pred             cCCeecC
Confidence            9999884

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.75  E-value=8.8e-08  Score=97.42  Aligned_cols=98  Identities=15%  Similarity=0.082  Sum_probs=63.7

Q ss_pred             CCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHH
Q 008021          262 EHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL  341 (581)
Q Consensus       262 p~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~  341 (581)
                      ..+.+.+++.|.+.++.     +...+-++++.|....||+..            +.++||+.+++-             
T Consensus         3 ~~~~~~l~~~l~~~~p~-----~~~~~i~~~~~G~~n~v~~v~------------~~~vlR~~~~~~-------------   52 (304)
T 3sg8_A            3 TYTFDQVEKAIEQLYPD-----FTINTIEISGEGNDCIAYEIN------------RDFIFKFPKHSR-------------   52 (304)
T ss_dssp             CCCHHHHHHHHHHHCTT-----CCCCCCCEEEECSSEEEEEST------------TSEEEEEESSHH-------------
T ss_pred             cCCHHHHHHHHHHhCCC-----ccceeeEecCCCCcceEEEEC------------CEEEEEecCCcc-------------
Confidence            45667788888887743     122335679999999999853            469999854420             


Q ss_pred             HHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCC-----CcEEEEeccCC
Q 008021          342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVH-----PAVLVETYEQG  416 (581)
Q Consensus       342 la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t-----~~VLVmEyi~G  416 (581)
                                                  ..-++.+|++.+..+..    ...+.+|+++.....     ..++||||++|
T Consensus        53 ----------------------------~~~~~~~E~~~l~~l~~----~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G  100 (304)
T 3sg8_A           53 ----------------------------GSTNLFNEVNILKRIHN----KLPLPIPEVVFTGMPSETYQMSFAGFTKIKG  100 (304)
T ss_dssp             ----------------------------HHHHHHHHHHHHHHHTT----SSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred             ----------------------------hHHHHHHHHHHHHHHHh----cCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence                                        01124556666655532    345778888754322     34789999999


Q ss_pred             ccHHH
Q 008021          417 ECVSR  421 (581)
Q Consensus       417 ~~L~~  421 (581)
                      .++.+
T Consensus       101 ~~l~~  105 (304)
T 3sg8_A          101 VPLTP  105 (304)
T ss_dssp             EECCH
T ss_pred             eECCc
Confidence            99875

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.68  E-value=1.8e-07  Score=98.72  Aligned_cols=112  Identities=15%  Similarity=0.047  Sum_probs=62.1

Q ss_pred             CCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHH
Q 008021          261 PEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN  340 (581)
Q Consensus       261 pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~  340 (581)
                      -+.+.+.+.+.+. .+|.-...  ..++.+++|.|..++||+++...+       ++.|+||...|..+- ...+     
T Consensus        10 ~~l~~~~v~~~l~-~~~~~~~~--~~~~~~~lg~G~~n~vyrv~~~~~-------~~~~vvK~~~~~~r~-~~~~-----   73 (397)
T 2olc_A           10 ETLNESSAVALAV-KLGLFPSK--STLTCQEIGDGNLNYVFHIYDQEH-------DRALIIKQAVPYAKV-VGES-----   73 (397)
T ss_dssp             CCCCHHHHHHHHH-HTTC-------CCEEEECCSSSSEEEEEEEC-----------CEEEEEEECCC-------------
T ss_pred             ccCCHHHHHHHHH-hcCcCCCC--CceEEEECCCCceEEEEEEEECCC-------CcEEEEEecchhhcc-cCCC-----
Confidence            3556666666666 55521110  125578999999999999987542       589999998876320 0000     


Q ss_pred             HHHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCcc
Q 008021          341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC  418 (581)
Q Consensus       341 ~la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~  418 (581)
                              .+    ...+              .+..|++.+..+...    ....+|+++.......++||||++|.+
T Consensus        74 --------~~----~~~~--------------r~~~E~~~L~~l~~~----~~~~vP~~~~~d~~~~~lvmE~l~g~~  121 (397)
T 2olc_A           74 --------WP----LTID--------------RARIESSALIRQGEH----VPHLVPRVFYSDTEMAVTVMEDLSHLK  121 (397)
T ss_dssp             --------CC----CCTT--------------HHHHHHHHHHHHHTT----CGGGSCCEEEEETTTTEEEECCCTTSE
T ss_pred             --------Cc----CcHH--------------HHHHHHHHHHHhhhh----CCCCcCeEEEEcCCccEEEEEeCCCcc
Confidence                    00    0000              123355555544322    234678887544455789999999843

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=98.52  E-value=5.9e-07  Score=90.63  Aligned_cols=96  Identities=15%  Similarity=0.026  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHH
Q 008021          266 AYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKI  345 (581)
Q Consensus       266 ~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~  345 (581)
                      +.+.+.+.+.+|.++..      -+++|.|..++||+.++.+        |++|+||+..++....              
T Consensus         3 ~~v~a~~~~l~G~~v~~------v~~~g~G~~~~vyrv~l~D--------G~~~~vK~~~~~~~~~--------------   54 (288)
T 3f7w_A            3 NSVAARVTELTGREVAA------VAERGHSHRWHLYRVELAD--------GTPLFVKALPDDAPAL--------------   54 (288)
T ss_dssp             HHHHHHHHHHHCCCEEE------EEEEEEETTEEEEEEEETT--------SCEEEEEECCTTCCCC--------------
T ss_pred             HHHHHHHHHhcCCCeEE------EEecCCCCCeEEEEEEECC--------CCEEEEEEeCCCCcch--------------
Confidence            45667778888986543      4889999999999999865        6999999876542110              


Q ss_pred             hcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHH
Q 008021          346 SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS  420 (581)
Q Consensus       346 ~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~  420 (581)
                                  ..             .|..|++.++.+.    ....+.+|+++.  .....+||||+++....
T Consensus        55 ------------~~-------------~~~~Ea~~L~~L~----~~~~vpvP~v~~--~~~~~lv~e~l~~~~~~   98 (288)
T 3f7w_A           55 ------------DG-------------LFRAEALGLDWLG----RSFGSPVPQVAG--WDDRTLAMEWVDERPPT   98 (288)
T ss_dssp             ------------TT-------------HHHHHHHHHHHHT----CSTTCCSCCEEE--EETTEEEEECCCCCCCC
T ss_pred             ------------hh-------------HHHHHHHHHHHHH----hhCCCCcceEEe--ccCceEEEEeecccCCC
Confidence                        00             1345666665442    234577888774  35668899998876543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.51  E-value=1.1e-06  Score=89.53  Aligned_cols=34  Identities=21%  Similarity=0.315  Sum_probs=28.6

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccC
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~  496 (581)
                      ..+++|+|+||+|||++       .++      .+.+|||+.+..-+
T Consensus       221 ~~~l~HgD~~~~Nil~~-------~~~------~~~lIDfe~a~~g~  254 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLG-------ENE------QIWVIDLDTVSFDL  254 (346)
T ss_dssp             SCCEECSSCSTTSEEEC-------GGG------CEEECCCTTCEECC
T ss_pred             cCceecCCCCcccEEEe-------CCC------cEEEEehhhcccCC
Confidence            47899999999999997       455      79999999876443

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.42  E-value=2.2e-06  Score=87.66  Aligned_cols=95  Identities=13%  Similarity=0.007  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHH
Q 008021          265 FAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK  344 (581)
Q Consensus       265 ~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~  344 (581)
                      .....+.+.+.+..     +..-+-++++.|...+||+.   .         +.++||+.+..                 
T Consensus         5 ~~~l~~~l~~~~p~-----~~~~~v~~l~~G~~n~v~~v---g---------~~~VlR~~~~~-----------------   50 (306)
T 3tdw_A            5 KLHYTTMIMTQFPD-----ISIQSVESLGEGFRNYAILV---N---------GDWVFRFPKSQ-----------------   50 (306)
T ss_dssp             HHHHHHHHHHHCTT-----SCCSCEEEEEECSSEEEEEE---T---------TTEEEEEESSH-----------------
T ss_pred             HHHHHHHHHHHCCC-----CCceeeeecCCCcceeEEEE---C---------CEEEEEecCCc-----------------
Confidence            34556666666642     12223578899999999987   2         56889984321                 


Q ss_pred             HhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC---CCCcEEEEeccCCccHHH
Q 008021          345 ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL---VHPAVLVETYEQGECVSR  421 (581)
Q Consensus       345 ~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l---~t~~VLVmEyi~G~~L~~  421 (581)
                                    .          ..-++..|++.+..+...    ..+.+|+++...   .+..+++|||++|.++.+
T Consensus        51 --------------~----------~~~~~~~E~~~L~~L~~~----~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           51 --------------Q----------GADELNKEIQLLPLLVGC----VKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             --------------H----------HHHHHHHHHHHHHHHTTT----CSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             --------------h----------HHHHHHHHHHHHHHHHhc----CCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence                          0          001345677777665432    346788876432   344789999999999876

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.40  E-value=9.5e-07  Score=91.48  Aligned_cols=36  Identities=28%  Similarity=0.299  Sum_probs=29.3

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      ...++|+|+||+|||++       +++      .+.+|||+.+..-++.
T Consensus       221 ~~~l~HgDl~~~Nil~~-------~~~------~~~vIDwe~a~~g~p~  256 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYR-------DFQ------PVAVLDWEMVALGPRE  256 (357)
T ss_dssp             CCEEECSSCSGGGEEEE-------TTE------EEEECCGGGCEEECHH
T ss_pred             CceEEeCCCCCCeEEEe-------CCc------EEEEEcccccccCCcH
Confidence            45899999999999998       433      5789999998876554

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.31  E-value=6.7e-06  Score=84.94  Aligned_cols=96  Identities=13%  Similarity=0.072  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHH
Q 008021          265 FAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK  344 (581)
Q Consensus       265 ~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~  344 (581)
                      ++.+.+.|.+.+|.+    +.-.+-+||+.|.+.++|+.+..         ++.++||+..++-.               
T Consensus        21 ~~~l~~~L~~~lg~~----~~i~~~~~l~gG~~n~~y~v~~~---------~~~~vlK~~~~~~~---------------   72 (312)
T 3jr1_A           21 WKSISQVLAEQFGAY----YFIKHKEKLYSGEMNEIWLINDE---------VQTVFVKINERSYR---------------   72 (312)
T ss_dssp             HHHHHHHHHHHHSSC----CCCCEEEEECCSSSSEEEEEESS---------SCEEEEEEEEGGGH---------------
T ss_pred             HHHHHHHHHHHhCCC----cceeeeEEeCCccceeeeEEEEC---------CCeEEEEeCCcccH---------------
Confidence            456777888888864    12234689999999999998752         47899998765411               


Q ss_pred             HhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccH
Q 008021          345 ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECV  419 (581)
Q Consensus       345 ~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L  419 (581)
                                                 -.+..|++.+..+...    ..+.+|+++..  .....++||||++|.++
T Consensus        73 ---------------------------~~~~~E~~~L~~L~~~----~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           73 ---------------------------SMFRAEADQLALLAKT----NSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             ---------------------------HHHHHHHHHHHHHHHT----TSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             ---------------------------HHHHHHHHHHHHHHhh----CCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence                                       1234566666665432    35788988743  23567999999999875

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=98.24  E-value=1.2e-05  Score=81.92  Aligned_cols=52  Identities=4%  Similarity=-0.041  Sum_probs=33.4

Q ss_pred             CCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC
Q 008021          261 PEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG  327 (581)
Q Consensus       261 pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~  327 (581)
                      ++.+.+++.+.+++ +|.  .++   .+-+|++.|...+||+....+         ..+++|+.+++
T Consensus         5 ~~~~~~~l~~~l~~-~~~--~~~---~~~~~i~~G~~n~~~~v~~~~---------g~~vlk~~~~~   56 (322)
T 2ppq_A            5 TDITEDELRNFLTQ-YDV--GSL---TSYKGIAEGVENSNFLLHTTK---------DPLILTLYEKR   56 (322)
T ss_dssp             CCCCHHHHHHHHTT-BCC--CCE---EEEEEECC---EEEEEEEESS---------CCEEEEEECC-
T ss_pred             ccCCHHHHHHHHHh-CCC--Ccc---eEeeccCCCcccceEEEEeCC---------ccEEEEEeCCC
Confidence            45677777777765 654  111   235789999999999998642         36889997763

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.21  E-value=7.3e-06  Score=87.35  Aligned_cols=35  Identities=23%  Similarity=0.393  Sum_probs=28.7

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      ...++|+|+||+|||++       .+       .+.+|||+.+..=++.
T Consensus       231 ~~~liHGDl~~~Nil~~-------~~-------~~~lID~e~a~~G~p~  265 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVT-------QD-------STQVIDPEFSFYGPMG  265 (420)
T ss_dssp             CCEEECSCCSGGGEEEC-------SS-------CEEECCCTTCEEECHH
T ss_pred             CCeEEecCCCCCcEEEe-------CC-------CCEEEeCcccccCchH
Confidence            57899999999999998       33       4899999987765543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=98.20  E-value=1.2e-05  Score=83.37  Aligned_cols=54  Identities=7%  Similarity=-0.068  Sum_probs=40.7

Q ss_pred             CCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC
Q 008021          261 PEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG  327 (581)
Q Consensus       261 pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~  327 (581)
                      |+.+.+.+.+.+.+.+|....    .+...+.|.|+...||+....+        | .+++|+.++.
T Consensus         4 p~l~~~~l~~~l~~~ygl~~~----~~~~l~~G~g~~N~vy~v~~~~--------g-~~vLK~~~~~   57 (339)
T 3i1a_A            4 QPIQAQQLIELLKVHYGIDIH----TAQFIQGGADTNAFAYQADSES--------K-SYFIKLKYGY   57 (339)
T ss_dssp             CSSCTTHHHHHHHHHHCCCCS----EEEEETTTSCSSCEEEEEECSS--------C-EEEEEEEECS
T ss_pred             CCCCHHHHHHHHHHHcCCCcc----eeEEeeccCccccceEEEEeCC--------C-CEEEEEecCc
Confidence            667888899999999987543    2344566777799999998643        5 8999997775

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=98.17  E-value=8.5e-06  Score=83.63  Aligned_cols=39  Identities=21%  Similarity=0.179  Sum_probs=28.1

Q ss_pred             hCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCH
Q 008021          450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSK  497 (581)
Q Consensus       450 ~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~  497 (581)
                      ..+++|+|+||+|||++...+   ..+      .+.+|||+.+..=++
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~---~~~------~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPERE---GLA------RVGVIDFQDAKLGHR  220 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSC---GGG------GEEECCCTTCEEECT
T ss_pred             CCeeEeCCcCcccEEeccCcC---CCC------CeEEEeCCCcCcCCC
Confidence            358999999999999981100   014      689999998765443

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=98.08  E-value=2.8e-05  Score=79.29  Aligned_cols=53  Identities=13%  Similarity=-0.003  Sum_probs=37.8

Q ss_pred             CCCCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC
Q 008021          260 APEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG  327 (581)
Q Consensus       260 ~pp~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~  327 (581)
                      .+..+.+.+...+ +.+|...+     -.-+|++ |....||+....+        |+.+++|+.+|+
T Consensus         8 ~~~l~~~~i~~~l-~~~g~~~~-----~~~~~l~-g~~n~~y~v~~~~--------g~~~vlK~~~~~   60 (328)
T 1zyl_A            8 FQTLHPDTIMDAL-FEHGIRVD-----SGLTPLN-SYENRVYQFQDED--------RRRFVVKFYRPE   60 (328)
T ss_dssp             CCCCCHHHHHHHH-HHTTCCCC-----SCCEEEC-CSSSEEEEECCTT--------CCCEEEEEECTT
T ss_pred             CCCCCHHHHHHHH-HHcCCCCC-----ceEEeec-CcccceEEEEcCC--------CCEEEEEEcCCC
Confidence            4566777888888 56665432     1246787 8889999887643        578999998876

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=98.08  E-value=1e-05  Score=81.96  Aligned_cols=73  Identities=22%  Similarity=0.193  Sum_probs=50.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+|++.|...++|+.   .          .+++|+..++....                                     
T Consensus        23 i~~l~gG~tN~~~~~---~----------~~vlR~~~~~~~~~-------------------------------------   52 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA---G----------DLCLRIPGKGTEEY-------------------------------------   52 (301)
T ss_dssp             CEEEESCSSEEEEEE---T----------TEEEEEECC----C-------------------------------------
T ss_pred             eeEcCCcccccccee---e----------eEEEECCCCCccce-------------------------------------
Confidence            589999999999998   2          48999977652211                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEecc-CCccHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE-QGECVS  420 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi-~G~~L~  420 (581)
                         +|..+|+.++..+.+.     ++. |+++.......++++||+ +|.++.
T Consensus        53 ---~~r~~E~~~l~~l~~~-----g~~-P~~~~~~~~~~~~v~e~i~~g~~l~   96 (301)
T 3dxq_A           53 ---INRANEAVAAREAAKA-----GVS-PEVLHVDPATGVMVTRYIAGAQTMS   96 (301)
T ss_dssp             ---CCHHHHHHHHHHHHHT-----TSS-CCEEEECTTTCCEEEECCTTCEECC
T ss_pred             ---eCHHHHHHHHHHHHHc-----CCC-CceEEEECCCCEEEEeecCCCccCC
Confidence               1234466666655442     344 888865555678999999 998775

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.93  E-value=7.8e-05  Score=80.06  Aligned_cols=61  Identities=15%  Similarity=0.207  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHhCCChhhh-hccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecC
Q 008021          266 AYTKKTIERAFGRRLSEI-FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP  326 (581)
Q Consensus       266 ~~~~~~le~elG~~~~ei-F~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P  326 (581)
                      +.+++++.+-++..|..+ -+.++-++|+.|-...||+.............++.|++|+.++
T Consensus        54 ~~a~~l~~~~l~~~w~~~~~~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~  115 (429)
T 1nw1_A           54 ERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN  115 (429)
T ss_dssp             HHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred             HHHHHHHHHhccCCcCCCCccceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC
Confidence            345556666566656532 1234568999999999999987421000001247899999754

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.80  E-value=0.00021  Score=75.66  Aligned_cols=106  Identities=14%  Similarity=0.101  Sum_probs=59.3

Q ss_pred             HHHHHHHHHhCCChhhh-hccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHH
Q 008021          267 YTKKTIERAFGRRLSEI-FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKI  345 (581)
Q Consensus       267 ~~~~~le~elG~~~~ei-F~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~  345 (581)
                      .+.+++.+-++..|..+ -+.++-+++..|-..++|+.+.....+....+++.+++|+..+....               
T Consensus        32 ~~~~~~~~~l~~~W~~~~~~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~---------------   96 (379)
T 3feg_A           32 RAYQWCREYLGGAWRRVQPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQG---------------   96 (379)
T ss_dssp             HHHHHHHHHHCGGGGGCCGGGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CC---------------
T ss_pred             HHHHHHHHHccCcCCCCCcCceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccch---------------
Confidence            34455556566666653 25667889999999999999874210000112578999984321100               


Q ss_pred             hcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHH
Q 008021          346 SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS  420 (581)
Q Consensus       346 ~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~  420 (581)
                                               -.|..+|++++..+.+.     ++ .|+++....  .-+||||++|.++.
T Consensus        97 -------------------------~~~~~rE~~vl~~L~~~-----gv-~P~ll~~~~--~g~v~e~i~G~~l~  138 (379)
T 3feg_A           97 -------------------------VDSLVLESVMFAILAER-----SL-GPQLYGVFP--EGRLEQYIPSRPLK  138 (379)
T ss_dssp             -------------------------HHHHHHHHHHHHHHHHT-----TS-SCCEEEEET--TEEEEECCSEEECC
T ss_pred             -------------------------HHHHHHHHHHHHHHHhc-----CC-CCeEEEEcC--CccEEEEecCccCC
Confidence                                     02334677777766543     34 477775433  34999999998765

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.79  E-value=0.00014  Score=75.69  Aligned_cols=84  Identities=13%  Similarity=0.122  Sum_probs=49.0

Q ss_pred             CCceeecccceeEEEEEEeccCCCC--CCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          287 FEEAPVASGSIAQVHRASLRFRYPG--QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       287 fd~~PIgsGSigQVyrA~l~~~~~G--~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      ++-+|++.|....+|+...... ++  ....++.+++|+..++....                                 
T Consensus        36 ~~~~~l~~G~~N~~y~v~~~~~-~~~~~~~~~~~~vlRi~~~~~~~~---------------------------------   81 (369)
T 3c5i_A           36 LRVKQILSGLTNQLFEVGLKEE-TANNYNSIRTRVLFRIYGKHVDEL---------------------------------   81 (369)
T ss_dssp             EEEEEC----CCEEEEEEECHH-HHTTCTTSCCEEEEEECCTTGGGT---------------------------------
T ss_pred             eEEEEeCCcccceEEEEEeCCC-CcccccCCCceEEEEecCCCccce---------------------------------
Confidence            4568999999999999987430 00  00013689999977653211                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECV  419 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L  419 (581)
                             +|...|.+.+..+.+.     ++ +|+++...  ...++|||++|.++
T Consensus        82 -------~~~~~E~~~l~~L~~~-----g~-~P~~~~~~--~~~~v~e~i~G~~l  121 (369)
T 3c5i_A           82 -------YNTISEFEVYKTMSKY-----KI-APQLLNTF--NGGRIEEWLYGDPL  121 (369)
T ss_dssp             -------SCHHHHHHHHHHHHHT-----TS-SCCEEEEE--TTEEEEECCCSEEC
T ss_pred             -------ecHHHHHHHHHHHHhc-----CC-CCceEEec--CCcEEEEEecCCcC
Confidence                   1123466666555432     34 78877433  46899999999765

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.94  E-value=0.0023  Score=69.33  Aligned_cols=37  Identities=11%  Similarity=0.096  Sum_probs=26.0

Q ss_pred             CCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchh
Q 008021          287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE  330 (581)
Q Consensus       287 fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~  330 (581)
                      ++-++|+.|-...+|+......       ++.+++|+..++...
T Consensus       111 ~~i~~lsgG~tN~~y~v~~~~~-------~~~~vLRi~g~~~~~  147 (458)
T 2qg7_A          111 LEFQIINGGITNILIKVKDMSK-------QAKYLIRLYGPKTDE  147 (458)
T ss_dssp             EEEEEECC--CEEEEEEEETTT-------TEEEEEEEECC-CCS
T ss_pred             eEEEEcCCCeEeEEEEEEECCC-------CceEEEEECCCChhh
Confidence            4568999999999999987431       478999998776433

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.88  E-value=0.0084  Score=64.32  Aligned_cols=106  Identities=16%  Similarity=0.118  Sum_probs=63.8

Q ss_pred             CHHHHHHHHHHHhCCChhhh-hccCCceeecccceeEEEEEEeccCCCCC-CCCCeEEEEEEecCCchhhHHHHHHHHHH
Q 008021          264 SFAYTKKTIERAFGRRLSEI-FDGFEEAPVASGSIAQVHRASLRFRYPGQ-KVKPIVVAVKVRHPGVGESIRRDFVIINL  341 (581)
Q Consensus       264 ~~~~~~~~le~elG~~~~ei-F~~fd~~PIgsGSigQVyrA~l~~~~~G~-~~~g~~VAVKV~~P~v~~~i~~Dl~il~~  341 (581)
                      +.+.+++++.+.+.. |..+ -+.++-+++..|-...+|+.+.... ++. ...++.+++|+..++....          
T Consensus        50 d~~~l~~l~~~~~p~-w~~~~~~~~~v~~lsGG~TN~~y~v~~~~~-~~~~~~~~~~~vlRi~g~~t~~~----------  117 (424)
T 3mes_A           50 DTEIIIGICRKNIPG-WKEINESYIEVKQIFSGLTNQLFVVSIVNE-SMSLSLKHPRILFRIYGKHVGKF----------  117 (424)
T ss_dssp             CHHHHHHHHHHHSTT-CTTCCGGGEEEEEECCCSSSEEEEEEECCC------CCCSEEEEEECCCCC-CC----------
T ss_pred             CHHHHHHHHHHHcCc-cccCCCCceEEEEcCCCcccceEEEEeCCC-cccccCCCCeEEEEECCCCcchh----------
Confidence            345566666665543 3321 0235678999999999999987521 000 0014789999965553211          


Q ss_pred             HHHHhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccH
Q 008021          342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECV  419 (581)
Q Consensus       342 la~~~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L  419 (581)
                                                    +|-.+|.+++..+...     ++ .|+++..  ....+||||++|.++
T Consensus       118 ------------------------------idR~~E~~~l~~L~~~-----gi-~P~l~~~--~~~~~I~efI~G~~l  157 (424)
T 3mes_A          118 ------------------------------YDSKVELDVFRYLSNI-----NI-APNIIAD--FPEGRIEEFIDGEPL  157 (424)
T ss_dssp             ------------------------------CCHHHHHHHHHHHHHT-----TS-SCCEEEE--ETTEEEEECCCSEEC
T ss_pred             ------------------------------cCHHHHHHHHHHHHhc-----CC-CCCEEEE--cCCCEEEEEeCCccC
Confidence                                          2234566666666532     34 6888743  346899999999875

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=95.38  E-value=0.13  Score=54.10  Aligned_cols=64  Identities=11%  Similarity=0.021  Sum_probs=35.8

Q ss_pred             HHHHhCCChhhh-hccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHH
Q 008021          272 IERAFGRRLSEI-FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD  335 (581)
Q Consensus       272 le~elG~~~~ei-F~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~D  335 (581)
                      +.+-++..|.++ =++++-++|.-|-.=.+|+.+..+.......+++.|++++.-|+....+.++
T Consensus        39 c~~~l~g~W~~v~~~~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~r~  103 (401)
T 3g15_A           39 CKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNK  103 (401)
T ss_dssp             HHHHSCGGGTTCCGGGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC---------
T ss_pred             HHHhCCccccCCCcCCEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhhhh
Confidence            444566555443 2457789999999999999987542000012357899999888766554444

>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A

Probab=85.04  E-value=14  Score=41.16  Aligned_cols=25  Identities=24%  Similarity=0.476  Sum_probs=22.5

Q ss_pred             cCCCCCCEEEeecccccccccccCCCCeEEEEeccccc
Q 008021          456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA  493 (581)
Q Consensus       456 ~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~  493 (581)
                      +|=||+|||++       .+|      +++=||||.+-
T Consensus       477 gDRH~~NILld-------~tG------~v~HIDFG~~f  501 (614)
T 3ls8_A          477 GDRHLDNLLLT-------KTG------KLFHIDFGYIL  501 (614)
T ss_dssp             CCCCTTSEEEC-------TTS------CEEECCCSSCT
T ss_pred             cCCCCcceeEc-------CCC------CEeeeehHHhh
Confidence            59999999999       788      99999999874

>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*

Probab=84.99  E-value=5.6  Score=45.02  Aligned_cols=25  Identities=24%  Similarity=0.465  Sum_probs=22.7

Q ss_pred             cCCCCCCEEEeecccccccccccCCCCeEEEEeccccc
Q 008021          456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA  493 (581)
Q Consensus       456 ~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~  493 (581)
                      +|=||+|||++       .+|      +++=||||.+-
T Consensus       551 GDRH~~NILid-------~tG------~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLT-------TNG------KLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEEC-------TTS------CEEECCCCSCT
T ss_pred             CCCCCcceEEe-------CCC------CEEEEeehhhh
Confidence            69999999999       778      99999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	581
d1nd4a_	255	d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferas	0.003

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

 Score = 37.3 bits (85), Expect = 0.003
 Identities = 32/194 (16%), Positives = 54/194 (27%), Gaps = 18/194 (9%)

Query: 280 LSEIFDGFEEAPVASG-SIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVI 338
             E   G++ A    G S A V R S + R         V+ VK    G    ++ +   
Sbjct: 6   WVERLFGYDWAQQTIGCSDAAVFRLSAQGRP--------VLFVKTDLSGALNELQDEAAR 57

Query: 339 INLAAKISSVIPAVKWLRLDESVQ-------QFAVFMMSQVDLAREAAHLSRFIYNFRRW 391
           ++  A       AV  +  +                + S +  A + + ++  +      
Sbjct: 58  LSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTL 117

Query: 392 KDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD 451
              + P                E G      +DE           A +         LV 
Sbjct: 118 DPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLV- 176

Query: 452 NFIHADMHPGNILV 465
              H D    NI+V
Sbjct: 177 -VTHGDACLPNIMV 189

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	581
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.84
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.8
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.8
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.79
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.79
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.79
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.78
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.78
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.78
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.77
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.77
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.77
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.77
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.77
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.77
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.77
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.76
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.76
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.76
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.74
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.74
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.74
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.74
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.74
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.74
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.74
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.73
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.73
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.73
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.73
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.73
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.73
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.72
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.72
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.72
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.72
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.72
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.71
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.7
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.7
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.69
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.69
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.69
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.69
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.69
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.69
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.68
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.68
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.67
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.67
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.66
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.64
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.64
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.64
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.64
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.63
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.62
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.61
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.61
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.61
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.61
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.52
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.84
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.3
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.3
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	98.28
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.46
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.43

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.84  E-value=7.6e-21  Score=180.13  Aligned_cols=185  Identities=11%  Similarity=0.091  Sum_probs=113.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .++||+|++|+||+|++.+        |++||||+.+++.....               .....+.      ........
T Consensus         5 g~~IG~G~~g~Vy~a~~~~--------g~~vAvKi~r~~~~~~~---------------~~~~~~~------~~~~~~~~   55 (191)
T d1zara2           5 GKLMGEGKESAVFNCYSEK--------FGECVVKFHKVGHTSFK---------------KVKEKRD------YGDLHFSV   55 (191)
T ss_dssp             EEEEEECSSEEEEEEEETT--------TEEEEEEEECC---------------------CCCC-------------CHHH
T ss_pred             CCEeeeCcceEEEEEECCC--------CCEEEEEEEecccchhh---------------hhhhhhh------hccHHHHH
Confidence            4789999999999999854        69999999998743210               0000000      00000011


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML  448 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L  448 (581)
                      ........|..++.++.       ++.+|.++  .....+|+|||++|.++.++.      ......++..++++ +..+
T Consensus        56 ~~~~~~~~e~~~l~~l~-------~~~v~~~~--~~~~~~lvme~~~~~~~~~l~------~~~~~~i~~ql~~~-l~~l  119 (191)
T d1zara2          56 LAIRSARNEFRALQKLQ-------GLAVPKVY--AWEGNAVLMELIDAKELYRVR------VENPDEVLDMILEE-VAKF  119 (191)
T ss_dssp             HHHHHHHHHHHHHHHTT-------TSSSCCEE--EEETTEEEEECCCCEEGGGCC------CSCHHHHHHHHHHH-HHHH
T ss_pred             HHHHHHHHHHHHHHHcc-------CCCcceEE--EecCCEEEEEeeccccccchh------hHHHHHHHHHHHHH-HHHH
Confidence            12233455667776552       34566665  234568999999998876531      11223456555554 8889


Q ss_pred             hhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCC
Q 008021          449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ  528 (581)
Q Consensus       449 ~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~  528 (581)
                      |..|++||||||+|||++       ++       .++|||||++...+......+       ..+|...+.+.+.  -.+
T Consensus       120 H~~giiHrDiKP~NILv~-------~~-------~~~liDFG~a~~~~~~~~~~~-------l~rd~~~~~~~f~--r~y  176 (191)
T d1zara2         120 YHRGIVHGDLSQYNVLVS-------EE-------GIWIIDFPQSVEVGEEGWREI-------LERDVRNIITYFS--RTY  176 (191)
T ss_dssp             HHTTEECSCCSTTSEEEE-------TT-------EEEECCCTTCEETTSTTHHHH-------HHHHHHHHHHHHH--HHH
T ss_pred             hhCCEEEccCChhheeee-------CC-------CEEEEECCCcccCCCCCcHHH-------HHHHHHHHHHHHc--CCC
Confidence            999999999999999998       44       589999999988875554443       2445554444332  222


Q ss_pred             CCCCCHHHHHHHH
Q 008021          529 QNCPNPKAFIEWM  541 (581)
Q Consensus       529 ~~~~D~~~f~~~l  541 (581)
                      ....|.|...+.+
T Consensus       177 ~~~~d~~s~~~~~  189 (191)
T d1zara2         177 RTEKDINSAIDRI  189 (191)
T ss_dssp             CCCCCHHHHHHHH
T ss_pred             CCcccHHHHHHHH
Confidence            3445777654443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7e-20  Score=182.98  Aligned_cols=199  Identities=17%  Similarity=0.136  Sum_probs=132.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+.++....    +                   -             
T Consensus        11 ~~~iG~G~fg~Vy~~~~~~~-------~~~vAiK~i~~~~~~----~-------------------~-------------   47 (263)
T d2j4za1          11 GRPLGKGKFGNVYLAREKQS-------KFILALKVLFKAQLE----K-------------------A-------------   47 (263)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEEHHHHH----H-------------------T-------------
T ss_pred             EEEEecCCCcEEEEEEECCC-------CcEEEEEEEchHHcc----C-------------------h-------------
Confidence            57899999999999999875       799999987542100    0                   0             


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                      ..+-.+.+|.+.+.++     ++++|  .+.+.-  ....-++||||++|++|.+++..... .......++..++.+ +
T Consensus        48 ~~~~~~~~E~~il~~l-----~hpnI--v~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~a-l  119 (263)
T d2j4za1          48 GVEHQLRREVEIQSHL-----RHPNI--LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA-L  119 (263)
T ss_dssp             TCHHHHHHHHHHHHTC-----CCTTB--CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHHHHHHHhc-----CCCCC--CeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHH-H
Confidence            0011234455544433     13332  233322  22345799999999999999865322 222223445555544 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.||..|++|||+||+|||++       .+|      .++|+|||++...+.......       .-.-.+.++|.+.. 
T Consensus       120 ~~lH~~~ivHrDiKp~Nill~-------~~~------~~kl~DFG~a~~~~~~~~~~~-------~Gt~~Y~APE~~~~-  178 (263)
T d2j4za1         120 SYCHSKRVIHRDIKPENLLLG-------SAG------ELKIADFGWSVHAPSSRRTTL-------CGTLDYLPPEMIEG-  178 (263)
T ss_dssp             HHHHHTTCCCCCCCGGGEEEC-------TTS------CEEECCCCSCSCCCCCCCEET-------TEEGGGCCHHHHTT-
T ss_pred             HHHHHCCeeeeeeccccceec-------CCC------CEeecccceeeecCCCccccc-------CCCCcccCHHHHcC-
Confidence            889999999999999999999       677      899999999988765432221       12235677887754 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLS  559 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~  559 (581)
                      ..+....|.|+|+..+.+++.+.  +......+++.
T Consensus       179 ~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~  214 (263)
T d2j4za1         179 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK  214 (263)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             CCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHH
Confidence            34556789999999999999873  44444444443

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.9e-20  Score=192.06  Aligned_cols=185  Identities=15%  Similarity=0.140  Sum_probs=125.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+........                                .  
T Consensus        11 ~~~iG~G~fg~V~~~~~~~~-------~~~vAiK~i~~~~~~~~~--------------------------------~--   49 (322)
T d1s9ja_          11 ISELGAGNGGVVFKVSHKPS-------GLVMARKLIHLEIKPAIR--------------------------------N--   49 (322)
T ss_dssp             EEEEECCSSCCEEEEEETTT-------TEEEEEEEEECCCCTTHH--------------------------------H--
T ss_pred             EEEEecCCCeEEEEEEECCC-------CcEEEEEEEChhhCHHHH--------------------------------H--
Confidence            46899999999999999875       799999998765322111                                1  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                          .+.+|.+.+.++     ++++|  .+.+.-  ....-+|||||++|++|.+++..... .......++..++.+ +
T Consensus        50 ----~~~~Ei~il~~l-----~HpnI--v~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~a-L  117 (322)
T d1s9ja_          50 ----QIIRELQVLHEC-----NSPYI--VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG-L  117 (322)
T ss_dssp             ----HHHHHGGGGGGC-----CCTTB--CCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             ----HHHHHHHHHHhC-----CCCCC--CcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHH-H
Confidence                122343333222     12322  222222  22345799999999999999865322 112223344444443 7


Q ss_pred             HHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          446 KMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ..||. +|++|||+||+|||++       .+|      +++|+|||++..+.+.....       .+-.-++.++|.+..
T Consensus       118 ~yLH~~~~IiHRDiKP~NILl~-------~~~------~vkl~DFGla~~~~~~~~~~-------~~GT~~Y~APEvl~~  177 (322)
T d1s9ja_         118 TYLREKHKIMHRDVKPSNILVN-------SRG------EIKLCDFGVSGQLIDSMANS-------FVGTRSYMSPERLQG  177 (322)
T ss_dssp             HHHHHHHCCCCSCCSGGGEEEC-------TTC------CEEECCCCCCHHHHHHTC----------CCSSCCCCHHHHHC
T ss_pred             HHHHHhCCEEccccCHHHeeEC-------CCC------CEEEeeCCCccccCCCcccc-------ccCCccccCchHHcC
Confidence            88996 6999999999999998       677      89999999998776544332       234456788888865


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       ..+....|.|++++.+.+++.+
T Consensus       178 -~~y~~~~DiWSlGvil~ell~G  199 (322)
T d1s9ja_         178 -THYSVQSDIWSMGLSLVEMAVG  199 (322)
T ss_dssp             -SCCCTTHHHHHHHHHHHHHHHS
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHC
Confidence             4566788999999999999987

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=4.6e-20  Score=187.30  Aligned_cols=187  Identities=16%  Similarity=0.088  Sum_probs=125.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||+|++|.||+|+.+.+       |+.||||+.+..-...                             .    +  
T Consensus        25 ~~~iG~G~fg~Vy~a~~~~~-------~~~vAvK~~~~~~~~~-----------------------------~----~--   62 (293)
T d1yhwa1          25 FEKIGQGASGTVYTAMDVAT-------GQEVAIRQMNLQQQPK-----------------------------K----E--   62 (293)
T ss_dssp             CEECCCSSSCEEEEEEBTTT-------CCEEEEEEEEGGGCSC-----------------------------H----H--
T ss_pred             EEEEecCcCcEEEEEEECCC-------CCEEEEEEEecccChH-----------------------------H----H--
Confidence            35799999999999999875       7999999865321100                             0    0  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~  446 (581)
                          .+.+|++.+.++     ++++|  .+.+..  ....-+|||||++|++|.+++....-.......++..++.+ ++
T Consensus        63 ----~~~~E~~il~~l-----~HpnI--v~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~a-L~  130 (293)
T d1yhwa1          63 ----LIINEILVMREN-----KNPNI--VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA-LE  130 (293)
T ss_dssp             ----HHHHHHHHHHHC-----CCTTB--CCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHH-HH
T ss_pred             ----HHHHHHHHHHhC-----CCCCE--eeEeEEEEECCEEEEEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHH-HH
Confidence                134455544433     13332  233322  23345799999999999998765322222233455555544 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|||+||.|||++       .+|      +++|+|||++..++++......     ..-.-.+.++|.+.. .
T Consensus       131 yLH~~~iiHrDiKp~NILl~-------~~~------~vkl~DFG~a~~~~~~~~~~~~-----~~gt~~Y~aPE~~~~-~  191 (293)
T d1yhwa1         131 FLHSNQVIHRDIKSDNILLG-------MDG------SVKLTDFGFCAQITPEQSKRST-----MVGTPYWMAPEVVTR-K  191 (293)
T ss_dssp             HHHHTTEECCCCSGGGEEEC-------TTC------CEEECCCTTCEECCSTTCCBCC-----CCSCGGGCCHHHHSS-S
T ss_pred             HHHHCCCcccCCcHHHeEEC-------CCC------cEeeccchhheeeccccccccc-----cccCCCccChhhhcC-C
Confidence            99999999999999999998       677      8999999999987654311100     011124567777654 4


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .+....|.|+++..+.+++++.
T Consensus       192 ~~~~~~DiwSlGvilyemltG~  213 (293)
T d1yhwa1         192 AYGPKVDIWSLGIMAIEMIEGE  213 (293)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCchhceehHhHHHHHHhhCC
Confidence            4556789999999999999873

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.79  E-value=4.5e-20  Score=192.04  Aligned_cols=208  Identities=16%  Similarity=0.148  Sum_probs=132.3

Q ss_pred             hhhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          281 SEIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       281 ~eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      ..+|+.|+ .+.||+|++|.||+|+.+.+       |+.||||+.+.....    |                        
T Consensus        25 ~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~-------~~~vAiK~i~~~~~~----~------------------------   69 (352)
T d1koba_          25 GSVYDYYDILEELGSGAFGVVHRCVEKAT-------GRVFVAKFINTPYPL----D------------------------   69 (352)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTT-------CCEEEEEEEECCSHH----H------------------------
T ss_pred             CCcccceEEEEEEecCCCeEEEEEEECCC-------CCEEEEEEECCcchh----H------------------------
Confidence            34666666 68999999999999999875       799999987654110    0                        


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHH
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLKSA  435 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~  435 (581)
                                 +-.+.+|.+.+.++     .+++|  .+.+.-  ....-+|||||++|++|.+++.....  .......
T Consensus        70 -----------~~~~~~Ei~il~~l-----~HpnI--v~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~  131 (352)
T d1koba_          70 -----------KYTVKNEISIMNQL-----HHPKL--INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN  131 (352)
T ss_dssp             -----------HHHHHHHHHHHTTC-----CSTTB--CCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHH
T ss_pred             -----------HHHHHHHHHHHHhC-----CCCCC--CcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHH
Confidence                       01133455544433     12332  233322  23344799999999999887643221  1222233


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      ++..++.+ ++.||..|++||||||+|||++..     .+|      +++|+|||++..+++......      ....-.
T Consensus       132 i~~qi~~a-L~ylH~~~iiHRDiKp~NILl~~~-----~~~------~vkL~DFGla~~~~~~~~~~~------~~gt~~  193 (352)
T d1koba_         132 YMRQACEG-LKHMHEHSIVHLDIKPENIMCETK-----KAS------SVKIIDFGLATKLNPDEIVKV------TTATAE  193 (352)
T ss_dssp             HHHHHHHH-HHHHHHTTEECCCCCGGGEEESST-----TCC------CEEECCCTTCEECCTTSCEEE------ECSSGG
T ss_pred             HHHHHHHH-HHHHHHCCeeeccccccccccccc-----CCC------eEEEeecccceecCCCCceee------ccCccc
Confidence            44455444 888999999999999999999721     234      899999999998865432110      011223


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHH
Q 008021          516 RTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSA  560 (581)
Q Consensus       516 ~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~  560 (581)
                      +.++|.+.. ..+....|.|+++..+.+++.+.  +......+++..
T Consensus       194 y~aPE~~~~-~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~  239 (352)
T d1koba_         194 FAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN  239 (352)
T ss_dssp             GCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH
T ss_pred             ccCHHHHcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            456665533 34455679999999999999873  344444444433

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.2e-19  Score=181.71  Aligned_cols=205  Identities=18%  Similarity=0.165  Sum_probs=130.1

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|+||+|+.+.+       |+.||||+.+....   ..                       .+..   
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~~~-------~~~vAvK~i~~~~~---~~-----------------------~~~~---   52 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLARELAT-------SREYAIKILEKRHI---IK-----------------------ENKV---   52 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTT-------CCEEEEEEEEHHHH---HH-----------------------TTCH---
T ss_pred             CCEEEEEEeeCCCeEEEEEEECCC-------CCEEEEEEEehHHc---cC-----------------------HHHH---
Confidence            344 57899999999999999875       79999998653200   00                       0000   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                             -.+.+|.+.+.++.     ++++  .+.+.-+  ...-++||||++|++|.+++..... .......++..++
T Consensus        53 -------~~~~~E~~il~~l~-----HpnI--v~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~  118 (288)
T d1uu3a_          53 -------PYVTRERDVMSRLD-----HPFF--VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV  118 (288)
T ss_dssp             -------HHHHHHHHHHHHCC-----STTB--CCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHcC-----CCCe--eEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHH
Confidence                   11344555554431     2332  2333222  2344799999999999998765322 1222233444555


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ ++.+|..|++|||+||+|||++       .+|      .++|+|||+++.++.+.......   ...-.-.+.++|.
T Consensus       119 ~a-l~ylH~~~iiHrDiKp~NIll~-------~~~------~vkl~DFG~a~~~~~~~~~~~~~---~~~GT~~Y~APE~  181 (288)
T d1uu3a_         119 SA-LEYLHGKGIIHRDLKPENILLN-------EDM------HIQITDFGTAKVLSPESKQARAN---SFVGTAQYVSPEL  181 (288)
T ss_dssp             HH-HHHHHHTTEECSCCSGGGEEEC-------TTS------CEEECCCTTCEECC-------------CCCCGGGCCHHH
T ss_pred             HH-HHhhccccEEcCcCCccccccC-------CCc------eEEecccccceecccCCcccccc---cccCCccccCcee
Confidence            44 7889999999999999999999       777      89999999999887654333211   1112346788887


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILL  558 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll  558 (581)
                      +..- .+....|.|+++..+.+++.+.  +...+..+++
T Consensus       182 ~~~~-~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~  219 (288)
T d1uu3a_         182 LTEK-SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF  219 (288)
T ss_dssp             HHTC-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             eccC-CCCcccceehhhHHHHHHhhCCCCCCCcCHHHHH
Confidence            7543 3445679999999999999883  3334444443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=7.4e-20  Score=187.83  Aligned_cols=206  Identities=17%  Similarity=0.185  Sum_probs=131.4

Q ss_pred             hhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          282 EIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       282 eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      |+|+.++ .+.||+|+||+||+|+.+.+       |+.||||+.+..-.+                              
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~-------~~~~AiK~i~~~~~~------------------------------   44 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSS-------KKTYMAKFVKVKGTD------------------------------   44 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEECCCTHH------------------------------
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCC-------CcEEEEEEEcCCccc------------------------------
Confidence            5677666 68999999999999999875       799999997654110                              


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSAL  436 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~l  436 (581)
                                +..+.+|.+.+.++.     +++  +.+.+.  +....-+|||||++|++|.+++.....  .......+
T Consensus        45 ----------~~~~~~Ei~il~~l~-----Hpn--Iv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i  107 (321)
T d1tkia_          45 ----------QVLVKKEISILNIAR-----HRN--ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSY  107 (321)
T ss_dssp             ----------HHHHHHHHHHHHHSC-----CTT--BCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHhCC-----CCC--CCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHH
Confidence                      011334554444331     233  223332  223455899999999999998864321  12222334


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +..++.+ ++.||..|++||||||.|||++       .++    ..+++++|||++...........      .....++
T Consensus       108 ~~qi~~a-l~yLH~~~iiHrDlKp~NIll~-------~~~----~~~ikl~DFG~~~~~~~~~~~~~------~~~t~~y  169 (321)
T d1tkia_         108 VHQVCEA-LQFLHSHNIGHFDIRPENIIYQ-------TRR----SSTIKIIEFGQARQLKPGDNFRL------LFTAPEY  169 (321)
T ss_dssp             HHHHHHH-HHHHHHTTEECCCCCGGGEEES-------SSS----CCCEEECCCTTCEECCTTCEEEE------EESCGGG
T ss_pred             HHHHHHH-HHHHHHcCCCcccccccceeec-------CCC----ceEEEEcccchhhccccCCcccc------ccccccc
Confidence            4444444 8889999999999999999997       222    23799999999987754321110      0112234


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSA  560 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~  560 (581)
                      .+++.+.. ..+....|.|+++..+.+++.+.  +......+++..
T Consensus       170 ~ape~~~~-~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~  214 (321)
T d1tkia_         170 YAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN  214 (321)
T ss_dssp             SCHHHHTT-CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred             ccchhccC-CCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            44554433 33445679999999999998874  444444444433

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.5e-19  Score=182.81  Aligned_cols=194  Identities=16%  Similarity=0.161  Sum_probs=127.8

Q ss_pred             hhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       280 ~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      +++.|+-  .+.||+|++|.||+|+.+.+       |+.||||+....-.+..                           
T Consensus        10 p~d~Y~i--~~~iG~G~fg~Vy~~~~~~~-------~~~vAvK~i~~~~~~~~---------------------------   53 (288)
T d2jfla1          10 PEDFWEI--IGELGDGAFGKVYKAQNKET-------SVLAAAKVIDTKSEEEL---------------------------   53 (288)
T ss_dssp             GGGTEEE--EEEEEEETTEEEEEEEETTT-------CCEEEEEEEECSSSGGG---------------------------
T ss_pred             cccCeEE--eEEEeeCCCcEEEEEEECCC-------CeEEEEEEECcCCHHHH---------------------------
Confidence            4555532  35799999999999999875       79999999765321110                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc--chhhHHH
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG--HERLKSA  435 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~  435 (581)
                                  -.|.+|++.+.++     ++++|.  +.+.-  ....-+|||||++|++|.+++.....  .......
T Consensus        54 ------------~~~~~E~~il~~l-----~HpnIv--~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~  114 (288)
T d2jfla1          54 ------------EDYMVEIDILASC-----DHPNIV--KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV  114 (288)
T ss_dssp             ------------GGTHHHHHHHHHC-----CCTTBC--CEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHH
T ss_pred             ------------HHHHHHHHHHHhC-----CCCCCC--eEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHH
Confidence                        0123455555443     133322  22222  23345799999999999998754322  2222334


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      ++..++.+ ++.||..|++|||+||+|||++       .+|      +++|+|||++..+.......     ....-.-.
T Consensus       115 i~~qi~~g-L~ylH~~~ivHrDiKp~NIll~-------~~~------~~Kl~DFG~a~~~~~~~~~~-----~~~~Gt~~  175 (288)
T d2jfla1         115 VCKQTLDA-LNYLHDNKIIHRDLKAGNILFT-------LDG------DIKLADFGVSAKNTRTIQRR-----DSFIGTPY  175 (288)
T ss_dssp             HHHHHHHH-HHHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECHHHHHHH-----TCCCSCCT
T ss_pred             HHHHHHHH-HHHHHHCCEEEeecChhheeEC-------CCC------CEEEEechhhhccCCCcccc-----cccccccc
Confidence            55555544 8889999999999999999999       677      89999999998765543211     00111224


Q ss_pred             HHHHHHHHhh----cCCCCCCCHHHHHHHHHHhhhH
Q 008021          516 RTAAECTLRL----SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       516 ~~~~e~ll~l----~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.++|.+...    ..+....|.|+|+..+.+++++
T Consensus       176 y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg  211 (288)
T d2jfla1         176 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI  211 (288)
T ss_dssp             TCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHS
T ss_pred             cCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhC
Confidence            6778877532    2233456999999999999987

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.78  E-value=7.7e-20  Score=184.02  Aligned_cols=201  Identities=18%  Similarity=0.151  Sum_probs=128.7

Q ss_pred             hccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHH
Q 008021          284 FDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ  362 (581)
Q Consensus       284 F~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~  362 (581)
                      |++|+ .+.||+|++|+||+|+.+.+       |+.||||+.+.......                       . .+..+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~-------~~~~AvK~i~~~~~~~~-----------------------~-~~~~~   50 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPT-------CKEYAVKIIDVTGGGSF-----------------------S-AEEVQ   50 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTT-------TEEEEEEEEETTCSTTC-----------------------C-HHHHH
T ss_pred             cccCEEceEEecCcCeEEEEEEECCC-------CCEEEEEEEecccccch-----------------------h-HHHHH
Confidence            34455 68899999999999999765       79999999765421110                       0 01111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHH
Q 008021          363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHI  439 (581)
Q Consensus       363 ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~  439 (581)
                      ...      -.+.+|+..+.++.    .++++  .+.+.-+  ...-+|||||++|++|.+++..... .......++..
T Consensus        51 ~~~------~~~~~E~~~l~~l~----~hpnI--v~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~q  118 (277)
T d1phka_          51 ELR------EATLKEVDILRKVS----GHPNI--IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA  118 (277)
T ss_dssp             HHH------HHHHHHHHHHHHHT----TCTTB--CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHH
T ss_pred             HHH------HHHHHHHHHHHHhc----CCCCe--EEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHH
Confidence            111      12455776666653    12332  2333222  2334799999999999999865332 22222344445


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      ++.+ ++.||..|++|+|+||+|||++       .+|      .++|+|||++..+++.....      .......+.+.
T Consensus       119 i~~a-l~~lH~~~ivHrDlkp~Nill~-------~~~------~~kl~DFG~a~~~~~~~~~~------~~~gt~~y~~P  178 (277)
T d1phka_         119 LLEV-ICALHKLNIVHRDLKPENILLD-------DDM------NIKLTDFGFSCQLDPGEKLR------EVCGTPSYLAP  178 (277)
T ss_dssp             HHHH-HHHHHHTTEECSCCSGGGEEEC-------TTC------CEEECCCTTCEECCTTCCBC------CCCSCGGGCCH
T ss_pred             HHHH-HHHHHHcCCcccccccceEEEc-------CCC------CeEEccchheeEccCCCcee------eeeccCCCCCH
Confidence            5444 8889999999999999999998       677      89999999999887643221      00111234455


Q ss_pred             HHHHhhc-----CCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRLS-----KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l~-----~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+....     ..+...|.|+++..+.+++.+
T Consensus       179 E~~~~~~~~~~~~~~~~~DiwslGvilyeml~g  211 (277)
T d1phka_         179 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG  211 (277)
T ss_dssp             HHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             HHhhccccccCCCCCchheEcccchhhhhhccC
Confidence            5554321     122346899999999999877

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9.8e-21  Score=190.14  Aligned_cols=190  Identities=16%  Similarity=0.118  Sum_probs=123.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+..-..                            +..       
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~-------~~~vAiK~i~~~~~~----------------------------~~~-------   47 (271)
T d1nvra_          10 VQTLGEGAYGEVQLAVNRVT-------EEAVAVKIVDMKRAV----------------------------DCP-------   47 (271)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEECC-----------------------------------------
T ss_pred             EEEEecCcCeEEEEEEECCC-------CCEEEEEEEehhhcc----------------------------hHH-------
Confidence            47899999999999999875       799999997543100                            000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                         -++.+|.+.+.++     ++++|  .+.+.-+  ...-+|||||++|++|.+++..... .......+...++.+ +
T Consensus        48 ---~~~~~Ei~~l~~l-----~HpnI--v~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~a-l  116 (271)
T d1nvra_          48 ---ENIKKEICINKML-----NHENV--VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG-V  116 (271)
T ss_dssp             ----CHHHHHHHHHTC-----CCTTB--CCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhC-----CCCCE--eeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHH-H
Confidence               1234555555433     13332  2333222  2334799999999999998754222 122223455555544 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.||..|++|||+||+|||++       .+|      .++|+|||++..++........   ...+-.-.+.++|.+..-
T Consensus       117 ~ylH~~~IiHrDiKp~NILl~-------~~~------~~KL~DFG~a~~~~~~~~~~~~---~~~~GT~~Y~APE~~~~~  180 (271)
T d1nvra_         117 VYLHGIGITHRDIKPENLLLD-------ERD------NLKISDFGLATVFRYNNRERLL---NKMCGTLPYVAPELLKRR  180 (271)
T ss_dssp             HHHHHTTEECSCCCGGGEEEC-------TTC------CEEECCCTTCEECEETTEECCB---CCCCSCGGGSCTHHHHCS
T ss_pred             HHHHHcCCccCcccHHHEEEC-------CCC------CEEEccchhheeeccCCccccc---cceeeCcCccCHhHhcCC
Confidence            889999999999999999998       667      8999999999876543221100   000112246677776543


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .......|.|+++..+.+++.+
T Consensus       181 ~~~~~~~DiwSlGvilyeml~G  202 (271)
T d1nvra_         181 EFHAEPVDVWSCGIVLTAMLAG  202 (271)
T ss_dssp             SBCHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCceeeeHhHHHHHHHHhC
Confidence            3333457999999999999887

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=1.1e-19  Score=183.69  Aligned_cols=186  Identities=18%  Similarity=0.153  Sum_probs=123.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|+++.+       |+.||||+.+.+..+                              .       
T Consensus        22 ~~~iG~G~fg~Vy~a~~~~~-------~~~vAvK~i~~~~~~------------------------------~-------   57 (287)
T d1opja_          22 KHKLGGGQYGEVYEGVWKKY-------SLTVAVKTLKEDTME------------------------------V-------   57 (287)
T ss_dssp             EEETTTTTTSSEEEEEEGGG-------TEEEEEEECCTTCSC------------------------------H-------
T ss_pred             eeEEeeCCCeEEEEEEECCC-------CeEEEEEEECCccch------------------------------H-------
Confidence            57899999999999999875       799999997654211                              0       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a  443 (581)
                         -+|.+|++.+.++.     +++|.  +.+.  .....-++||||++|+++.+++.....   .......++..++.+
T Consensus        58 ---~~~~~E~~il~~l~-----HpnIv--~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~g  127 (287)
T d1opja_          58 ---EEFLKEAAVMKEIK-----HPNLV--QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA  127 (287)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTTBC--CEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHhCC-----CCCEe--cCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHH
Confidence               12455666665542     33322  2222  223445799999999999998864221   112223344444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       ++.||..|++|||+||.|||++       .+|      .++|+|||+++.++.+.......    ....-.+.++|.+.
T Consensus       128 -L~yLH~~~iiHrDlKp~NILl~-------~~~------~~Kl~DFG~a~~~~~~~~~~~~~----~~g~~~y~aPE~~~  189 (287)
T d1opja_         128 -MEYLEKKNFIHRDLAARNCLVG-------ENH------LVKVADFGLSRLMTGDTYTAHAG----AKFPIKWTAPESLA  189 (287)
T ss_dssp             -HHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCCCCTTTCCSSSSEEETT----EEECGGGCCHHHHH
T ss_pred             -HHHHHHCCcccCccccCeEEEC-------CCC------cEEEccccceeecCCCCceeecc----ccccccccChHHHc
Confidence             8899999999999999999998       777      89999999998775432211000    00011244566654


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      . +.+....|.|+|+..+.+++.+
T Consensus       190 ~-~~~~~k~DiwS~Gv~l~ell~~  212 (287)
T d1opja_         190 Y-NKFSIKSDVWAFGVLLWEIATY  212 (287)
T ss_dssp             H-CCCSHHHHHHHHHHHHHHHHTT
T ss_pred             C-CCCCchhhhhhHHHHHHHHHhC
Confidence            4 4455567899999999988864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=6.2e-19  Score=175.45  Aligned_cols=185  Identities=18%  Similarity=0.151  Sum_probs=118.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|++++        ++.||||+.+.+...                                      
T Consensus        10 ~~~iG~G~fg~Vy~~~~~~--------~~~vAvK~i~~~~~~--------------------------------------   43 (263)
T d1sm2a_          10 VQEIGSGQFGLVHLGYWLN--------KDKVAIKTIREGAMS--------------------------------------   43 (263)
T ss_dssp             EEEEECCSSCCEEEEEETT--------TEEEEEEECCSSSSC--------------------------------------
T ss_pred             EEEEeeCCCeEEEEEEECC--------CCEEEEEEECCCcCc--------------------------------------
Confidence            4679999999999999875        589999997654211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccc--ccCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV--YPLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~--~~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                        +-+|.+|++.+.++.     ++++.  +.+  .......++||||++|++|.+++......  ......++..++.+ 
T Consensus        44 --~~~~~~E~~~l~~l~-----HpnIv--~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~g-  113 (263)
T d1sm2a_          44 --EEDFIEEAEVMMKLS-----HPKLV--QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG-  113 (263)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTBC--CEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhcC-----CCCcc--cccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHH-
Confidence              013456776666542     33332  222  12235568999999999999987653221  22223455555544 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ++.+|..|++|||+||.|||++       .++      .++|+|||+++.+.+.......    .....-.+.++|.+. 
T Consensus       114 l~~lH~~~iiHrDlKp~Nill~-------~~~------~~Kl~DFGla~~~~~~~~~~~~----~~~gt~~y~aPE~l~-  175 (263)
T d1sm2a_         114 MAYLEEACVIHRDLAARNCLVG-------ENQ------VIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFS-  175 (263)
T ss_dssp             HHHHHHTTCCCTTCSGGGEEEC-------GGG------CEEECSCC----------------------CTTSCCHHHHT-
T ss_pred             HHhhhccceeecccchhheeec-------CCC------CeEecccchheeccCCCceeec----ceecCcccCChHHhc-
Confidence            7889999999999999999999       777      8999999999877654432211    111122356677654 


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+.+....|.|+|+..+.+++++
T Consensus       176 ~~~~~~k~DVwS~Gvil~el~t~  198 (263)
T d1sm2a_         176 FSRYSSKSDVWSFGVLMWEVFSE  198 (263)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCchhhhcchHHHHHHHHHC
Confidence            34455567999999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.77  E-value=4.6e-19  Score=181.07  Aligned_cols=194  Identities=21%  Similarity=0.163  Sum_probs=130.0

Q ss_pred             ChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChh
Q 008021          279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD  358 (581)
Q Consensus       279 ~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~  358 (581)
                      ++++.|+.+  +.||+|++|.||+|+.+.+       |+.||||+.+......                          .
T Consensus        12 dp~~~y~~l--~~lG~G~fg~Vy~a~~~~~-------~~~vAvK~i~~~~~~~--------------------------~   56 (309)
T d1u5ra_          12 DPEKLFSDL--REIGHGSFGAVYFARDVRN-------SEVVAIKKMSYSGKQS--------------------------N   56 (309)
T ss_dssp             CHHHHEEEE--EEEEECSSSEEEEEEETTT-------TEEEEEEEEECCSSCH--------------------------H
T ss_pred             CcHHhcEee--EEEecCCCeEEEEEEECCC-------CcEEEEEEEchhhccC--------------------------H
Confidence            566666644  6799999999999999875       7999999977542110                          0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc-chhhHHH
Q 008021          359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG-HERLKSA  435 (581)
Q Consensus       359 e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~  435 (581)
                      +..          -++.+|.+.+.++.     +++|.  +.+.-+  ...-++||||++|+++..+...... .......
T Consensus        57 ~~~----------~~~~~Ei~il~~l~-----HpnIv--~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~  119 (309)
T d1u5ra_          57 EKW----------QDIIKEVRFLQKLR-----HPNTI--QYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA  119 (309)
T ss_dssp             HHH----------HHHHHHHHHHTTCC-----CTTBC--CEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHH
T ss_pred             HHH----------HHHHHHHHHHHHCC-----CCCEe--eEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHH
Confidence            001          12345655554331     23322  222212  2345799999999999876543221 2222234


Q ss_pred             HHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcH
Q 008021          436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG  515 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~  515 (581)
                      ++..++.+ +..||..|++|||+||.|||++       .+|      .++|+|||++.........         .-.-.
T Consensus       120 i~~qi~~a-L~yLH~~~iiHrDiKp~NILl~-------~~~------~~Kl~DFG~a~~~~~~~~~---------~GT~~  176 (309)
T d1u5ra_         120 VTHGALQG-LAYLHSHNMIHRDVKAGNILLS-------EPG------LVKLGDFGSASIMAPANSF---------VGTPY  176 (309)
T ss_dssp             HHHHHHHH-HHHHHHTTCBCCCCSGGGEEEE-------TTT------EEEECCCTTCBSSSSBCCC---------CSCGG
T ss_pred             HHHHHHHH-HHHHHhCCEeccCCCcceEEEC-------CCC------CEEEeecccccccCCCCcc---------ccCcc
Confidence            45554444 8889999999999999999999       677      9999999999877654321         12235


Q ss_pred             HHHHHHHHhh--cCCCCCCCHHHHHHHHHHhhhH
Q 008021          516 RTAAECTLRL--SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       516 ~~~~e~ll~l--~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +.++|.+...  +.+....|.|+|+..+.+++.+
T Consensus       177 Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g  210 (309)
T d1u5ra_         177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  210 (309)
T ss_dssp             GCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHC
Confidence            7788887643  3455567999999999999987

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.77  E-value=1.5e-19  Score=188.71  Aligned_cols=191  Identities=15%  Similarity=0.051  Sum_probs=124.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+..+.-.   ..+                                 
T Consensus         9 ~~~lG~G~fg~Vy~~~~~~t-------~~~vAiK~i~~~~~---~~~---------------------------------   45 (364)
T d1omwa3           9 HRIIGRGGFGEVYGCRKADT-------GKMYAMKCLDKKRI---KMK---------------------------------   45 (364)
T ss_dssp             EEEEEECSSCEEEEEEETTT-------CCEEEEEEEEHHHH---HHH---------------------------------
T ss_pred             eeEEecCCCeEEEEEEECCC-------CCEEEEEEEchHHc---chh---------------------------------
Confidence            57899999999999999875       79999998653200   000                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l  445 (581)
                      ..+..+.+|...+..+. .. ++++|  .+.+..  ....-++||||++|++|.+++...... ......++..++.+ +
T Consensus        46 ~~~~~~~~e~~~~~~l~-~~-~hpnI--v~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~a-L  120 (364)
T d1omwa3          46 QGETLALNERIMLSLVS-TG-DCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG-L  120 (364)
T ss_dssp             TCHHHHHHHHHHHHHHS-SS-CCTTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHH-H
T ss_pred             hHHHHHHHHHHHHHHHh-cC-CCCcE--EEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHH-H
Confidence            00111122322222111 11 12322  233322  233458999999999999998653221 12223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..+|..|++|||+||+|||++       .+|      .++|+|||+++.++.......       .-.-.+.++|.+..-
T Consensus       121 ~ylH~~~iiHrDlKP~NILl~-------~~g------~iKl~DFGla~~~~~~~~~~~-------~GT~~y~APE~~~~~  180 (364)
T d1omwa3         121 EHMHNRFVVYRDLKPANILLD-------EHG------HVRISDLGLACDFSKKKPHAS-------VGTHGYMAPEVLQKG  180 (364)
T ss_dssp             HHHHHTTEECCCCSGGGEEEC-------SSS------CEEECCCTTCEECSSSCCCSC-------CSCGGGCCHHHHSTT
T ss_pred             HHHHHCCccceeeccceeEEc-------CCC------cEEEeeeceeeecCCCccccc-------ccccccchhHHhhcC
Confidence            889999999999999999998       677      899999999988765432211       123456777777554


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..+....|.|+++..+.+++.+
T Consensus       181 ~~~~~~~DiwSlGvilyemltG  202 (364)
T d1omwa3         181 VAYDSSADWFSLGCMLFKLLRG  202 (364)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCcccchhHHHHHHHHHHhC
Confidence            4455677999999999999987

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=5.1e-19  Score=179.65  Aligned_cols=194  Identities=19%  Similarity=0.204  Sum_probs=113.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|+++.+  |  .....||||..+++..+.                            .        
T Consensus        31 ~~~lG~G~fg~Vy~~~~~~~--~--~~~~~vavK~~~~~~~~~----------------------------~--------   70 (299)
T d1jpaa_          31 EQVIGAGEFGEVCSGHLKLP--G--KREIFVAIKTLKSGYTEK----------------------------Q--------   70 (299)
T ss_dssp             EEEEEECSSSEEEEEEECC-------CCEEEEEEECCSSCCHH----------------------------H--------
T ss_pred             eeEEeeCCCeEEEEEEEeCC--C--CEEEEEEEEEECcccCHH----------------------------H--------
Confidence            57899999999999998753  2  012468999876653211                            0        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                        .-+|.+|++.+.++     ++++|.  +.+.  .....-++||||++|++|.+++....+.  ......++..++.+ 
T Consensus        71 --~~~~~~E~~~l~~l-----~HpnIv--~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~g-  140 (299)
T d1jpaa_          71 --RRDFLSEASIMGQF-----DHPNVI--HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG-  140 (299)
T ss_dssp             --HHHHHHHHHHHTTC-----CCTTBC--CEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhC-----CCCCCc--cEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHH-
Confidence              01345666655443     133332  2222  2234558999999999999987653221  12223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++||||||.|||++       .++      .++|+|||+++.+.+.....-..-.......-.+.++|.+. 
T Consensus       141 l~yLH~~~iiHrDlKp~NILl~-------~~~------~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-  206 (299)
T d1jpaa_         141 MKYLADMNYVHRDLAARNILVN-------SNL------VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ-  206 (299)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEEC-------TTC------CEEECCC-----------------------CGGGSCHHHHH-
T ss_pred             HHHHhhCCCccCccccceEEEC-------CCC------cEEECCcccceEccCCCCcceeeecccccCCccccCHHHHh-
Confidence            8889999999999999999998       677      89999999998876543322111111111112244556553 


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      -..+....|.|+|+..+.++++
T Consensus       207 ~~~~~~~sDvwS~Gvvl~el~t  228 (299)
T d1jpaa_         207 YRKFTSASDVWSYGIVMWEVMS  228 (299)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCcccccccchHHHHHHHh
Confidence            3455556799999999999986

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=6.4e-19  Score=176.37  Aligned_cols=204  Identities=15%  Similarity=0.123  Sum_probs=122.3

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|+||+|+.+.+       |+.||||+.+.+-...                           ...   
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~-------~~~vAvK~i~~~~~~~---------------------------~~~---   47 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSD-------GKILVWKELDYGSMTE---------------------------AEK---   47 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT-------CCEEEEEEECCTTSCH---------------------------HHH---
T ss_pred             hCEEeEEEecCCCeEEEEEEECCC-------CCEEEEEEEChhhCCH---------------------------HHH---
Confidence            344 57899999999999999875       7999999976542110                           000   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC---C-CCcEEEEeccCCccHHHHHHhhhc-----chhhHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL---V-HPAVLVETYEQGECVSRYVDELQG-----HERLKSA  435 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l---~-t~~VLVmEyi~G~~L~~~l~~~~~-----~~~~~~~  435 (581)
                             -.+.+|++.+.++     ++++|  .+.+.-+   . ..-++||||++|++|.+++.....     .......
T Consensus        48 -------~~~~~E~~il~~l-----~HpnI--v~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~  113 (269)
T d2java1          48 -------QMLVSEVNLLREL-----KHPNI--VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR  113 (269)
T ss_dssp             -------HHHHHHHHHTTSC-----CCTTB--CCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHH
T ss_pred             -------HHHHHHHHHHHHC-----CCCCE--eeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHH
Confidence                   0134455544332     12332  2222211   1 223689999999999998854211     1112233


Q ss_pred             HHHHHHHHHHHHhhhCC-----eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          436 LAHIGTHALLKMLLVDN-----FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       436 la~~~i~a~l~~L~~~G-----~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      ++..++.+ ++.+|..|     ++|||+||.|||++       .+|      .++|+|||++..+++.....     ...
T Consensus       114 i~~qi~~a-l~ylH~~~~~~~~IiHrDiKp~NIll~-------~~~------~vkl~DFG~a~~~~~~~~~~-----~~~  174 (269)
T d2java1         114 VMTQLTLA-LKECHRRSDGGHTVLHRDLKPANVFLD-------GKQ------NVKLGDFGLARILNHDTSFA-----KAF  174 (269)
T ss_dssp             HHHHHHHH-HHHHHHHCC---------CCGGGEEEC-------TTS------CEEECCHHHHHHC---------------
T ss_pred             HHHHHHHH-HHHHHHhcCCCCCEEeCcCchhhcCcC-------CCC------cEEEeeccceeecccCCCcc-----ccC
Confidence            44444443 78889765     99999999999998       677      89999999999876543221     122


Q ss_pred             HhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHH
Q 008021          511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSA  560 (581)
Q Consensus       511 ~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~  560 (581)
                      .-.-.+.++|.+.. ..+....|.|+|+..+.+++++.  +......++...
T Consensus       175 ~gt~~Y~APE~l~~-~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~  225 (269)
T d2java1         175 VGTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK  225 (269)
T ss_dssp             -CCCSCCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCcccCCHHHHcC-CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHH
Confidence            23345677787643 44455679999999999999873  444444444443

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=7.7e-19  Score=179.83  Aligned_cols=200  Identities=16%  Similarity=0.124  Sum_probs=129.4

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      +|+ .+.||+|++|+||+|+.+.+       |+.||||+.+.+...    +                  .    +..   
T Consensus         5 dy~i~~~lG~G~fg~Vy~a~~~~~-------g~~vAvK~i~~~~~~----~------------------~----~~~---   48 (316)
T d1fota_           5 DFQILRTLGTGSFGRVHLIRSRHN-------GRYYAMKVLKKEIVV----R------------------L----KQV---   48 (316)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTT-------CCEEEEEEEEHHHHH----H------------------T----TCH---
T ss_pred             HeEEEEEEecCcCcEEEEEEECCC-------CCEEEEEEEchHHcc----C------------------H----HHH---
Confidence            344 57899999999999999875       799999997543100    0                  0    000   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhcch-hhHHHHHHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQGHE-RLKSALAHIGT  441 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~~~-~~~~~la~~~i  441 (581)
                             -.+.+|+..+.++     ++++|  .+.+.-+  ...-++||||++|+++..++....... .....++..++
T Consensus        49 -------~~~~~E~~il~~l-----~HpnI--v~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~  114 (316)
T d1fota_          49 -------EHTNDERLMLSIV-----THPFI--IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC  114 (316)
T ss_dssp             -------HHHHHHHHHHHSC-----CBTTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHhc-----cCcCh--hheeeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHH
Confidence                   0133455444332     23332  2333222  344589999999999999876533221 11223444444


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      . .+..+|..|++|||+||+|||++       .+|      .++|+|||++..+......        +.-.-.+.++|.
T Consensus       115 ~-al~~lH~~~iiHrDiKp~NILl~-------~~g------~vkL~DFG~a~~~~~~~~~--------~~Gt~~Y~APE~  172 (316)
T d1fota_         115 L-ALEYLHSKDIIYRDLKPENILLD-------KNG------HIKITDFGFAKYVPDVTYT--------LCGTPDYIAPEV  172 (316)
T ss_dssp             H-HHHHHHTTTEECCCCCGGGEEEC-------TTS------CEEECCCSSCEECSSCBCC--------CCSCTTTCCHHH
T ss_pred             H-hhhhhccCcEEccccCchheeEc-------CCC------CEEEecCccceEecccccc--------ccCcccccCHHH
Confidence            3 38889999999999999999998       677      8999999999887654321        111224667777


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHH
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILL  558 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll  558 (581)
                      +.. ..+....|.|+++..+.+++.+.  +...+..+++
T Consensus       173 l~~-~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~  210 (316)
T d1fota_         173 VST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY  210 (316)
T ss_dssp             HTT-CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             HcC-CCCCchhhccccchhHHHHHhCCCCCCCcCHHHHH
Confidence            643 34556789999999999999883  3333333333

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.76  E-value=3e-19  Score=185.51  Aligned_cols=206  Identities=17%  Similarity=0.174  Sum_probs=132.9

Q ss_pred             hhhccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          282 EIFDGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       282 eiF~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      .+.+.++ .+.||+|++|+||+|+.+.+       |+.||||+....-..    |                         
T Consensus        23 ~il~~Y~i~~~lG~G~fg~Vy~~~~~~~-------g~~vAvK~i~~~~~~----~-------------------------   66 (350)
T d1koaa2          23 HVLDHYDIHEELGTGAFGVVHRVTERAT-------GNNFAAKFVMTPHES----D-------------------------   66 (350)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTT-------TEEEEEEEECCCSHH----H-------------------------
T ss_pred             CCccCeEEEEEEecCcCeEEEEEEECCC-------CCEEEEEEEcccchh----h-------------------------
Confidence            3455555 57899999999999999875       799999987543110    0                         


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG--HERLKSAL  436 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~l  436 (581)
                                .-.+.+|.+.+.++.     +++|  .+.+.  .....-+|||||++|++|.+++....+  .......+
T Consensus        67 ----------~~~~~~E~~il~~l~-----HpnI--v~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i  129 (350)
T d1koaa2          67 ----------KETVRKEIQTMSVLR-----HPTL--VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY  129 (350)
T ss_dssp             ----------HHHHHHHHHHHHHTC-----CTTB--CCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHhCC-----CCCC--CcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHH
Confidence                      011345665555442     2332  22222  223455899999999999998843221  22223345


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +..++.+ ++.||..|++||||||+|||+...     .+|      .++|+|||++..+++.....      ...-.-.+
T Consensus       130 ~~qi~~a-L~ylH~~~iiHrDiKp~NIll~~~-----~~~------~vkL~DFG~a~~~~~~~~~~------~~~gT~~Y  191 (350)
T d1koaa2         130 MRQVCKG-LCHMHENNYVHLDLKPENIMFTTK-----RSN------ELKLIDFGLTAHLDPKQSVK------VTTGTAEF  191 (350)
T ss_dssp             HHHHHHH-HHHHHHTTEECCCCCGGGEEESST-----TSC------CEEECCCTTCEECCTTSCEE------EECSCTTT
T ss_pred             HHHHHHH-HHHHHhcCCeeeeechhHeeeccC-----CCC------eEEEeecchheecccccccc------eecCcccc
Confidence            5555544 888999999999999999999711     234      89999999999876543211      00112355


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLS  559 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~  559 (581)
                      .++|.+.. ..+....|.|+++..+.+++.+.  +...+..+++.
T Consensus       192 ~aPEv~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~  235 (350)
T d1koaa2         192 AAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR  235 (350)
T ss_dssp             CCHHHHHT-CCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cCHHHHcC-CCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHH
Confidence            67777654 33444679999999999998773  33334444443

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.7e-20  Score=189.75  Aligned_cols=208  Identities=15%  Similarity=0.047  Sum_probs=131.8

Q ss_pred             eeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHH
Q 008021          290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM  369 (581)
Q Consensus       290 ~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~  369 (581)
                      +.||+|++|+||+|+++.+       |+.||||+.+.+.....                            -+.+.    
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~-------~~~vAvK~i~~~~~~~~----------------------------~~~~~----   44 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNT-------NQIVAIKKIKLGHRSEA----------------------------KDGIN----   44 (299)
T ss_dssp             EEEEEETTEEEEEEECSSC-------CSEEEEEEC----------------------------------------C----
T ss_pred             eEeccCcCeEEEEEEECCC-------CcEEEEEEEehhhhhhh----------------------------hHHHH----
Confidence            5799999999999999875       79999998754311100                            00011    


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhh-cchhhHHHHHHHHHHHHHH
Q 008021          370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALLK  446 (581)
Q Consensus       370 ~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~-~~~~~~~~la~~~i~a~l~  446 (581)
                        -.+.+|...+.++.     +++|.  +.+.  .....-+|||||++|..+..+..... -.......++..++.+ ++
T Consensus        45 --~~~~~Ei~il~~l~-----hpnIv--~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~a-L~  114 (299)
T d1ua2a_          45 --RTALREIKLLQELS-----HPNII--GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQG-LE  114 (299)
T ss_dssp             --THHHHHHHHHHHCC-----CTTBC--CEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHH-HH
T ss_pred             --HHHHHHHHHHHhCC-----CCCEe--EEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHH-HH
Confidence              11334544444331     23322  2222  22344589999999988776653211 1112223455555544 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhc
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS  526 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~  526 (581)
                      .||..|++|||+||+|||++       .+|      .++|+|||++..++.+.....     ..+..-.+.++|.+....
T Consensus       115 ~lH~~~iiHrDiKp~NIli~-------~~~------~~KL~DFG~a~~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~  176 (299)
T d1ua2a_         115 YLHQHWILHRDLKPNNLLLD-------ENG------VLKLADFGLAKSFGSPNRAYT-----HQVVTRWYRAPELLFGAR  176 (299)
T ss_dssp             HHHHTTCCCCCCCGGGEEEC-------TTC------CEEECCCGGGSTTTSCCCCCC-----CSCCCCTTCCHHHHTTCS
T ss_pred             HhhccceecccCCcceEEec-------CCC------ccccccCccccccCCCccccc-----ceecChhhccHHHHccCC
Confidence            89999999999999999998       677      899999999987765432110     011234577888876655


Q ss_pred             CCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          527 KQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      .+....|.|+++..+.+++.+.  +......+++..+.+.
T Consensus       177 ~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~  216 (299)
T d1ua2a_         177 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFET  216 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             CCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHh
Confidence            5566789999999999999883  5555555666555544

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=5.1e-19  Score=180.47  Aligned_cols=190  Identities=17%  Similarity=0.127  Sum_probs=115.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+......+.                                     
T Consensus        14 ~~~lG~G~fg~Vy~~~~~~~-------~~~vAvK~i~~~~~~~-------------------------------------   49 (307)
T d1a06a_          14 RDVLGTGAFSEVILAEDKRT-------QKLVAIKCIAKKALEG-------------------------------------   49 (307)
T ss_dssp             EEESBSGGGGGEEEEEETTT-------CCEEEEEEEEC------------------------------------------
T ss_pred             EEEEeeccCeEEEEEEECCC-------CCEEEEEEEchHHhhh-------------------------------------
Confidence            46899999999999999875       7999999976541100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                       .+-.+.+|.+.+.++     ++++|  .+.+.  .....-+|||||++|++|.+++..... .......++..++.+ +
T Consensus        50 -~~~~~~~Ei~il~~l-----~HpnI--v~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~a-l  120 (307)
T d1a06a_          50 -KEGSMENEIAVLHKI-----KHPNI--VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA-V  120 (307)
T ss_dssp             ------CHHHHHHHTC-----CCTTB--CCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHH-H
T ss_pred             -HHHHHHHHHHHHHhC-----CCCCC--CcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHH-H
Confidence             001233455544433     13332  23332  223345799999999999999865322 122223345555544 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.||..|++|||+||+|||+...+    .+|      .++|+|||++...++.....      ..+-.-.+.++|.+.. 
T Consensus       121 ~ylH~~~iiHrDiKp~Nil~~~~~----~~~------~vkl~DFG~a~~~~~~~~~~------~~~GT~~y~APE~~~~-  183 (307)
T d1a06a_         121 KYLHDLGIVHRDLKPENLLYYSLD----EDS------KIMISDFGLSKMEDPGSVLS------TACGTPGYVAPEVLAQ-  183 (307)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESSSS----TTC------CEEECCC------------------------CTTSCHHHHTT-
T ss_pred             HhhhhceeeeEEecccceeecccC----CCc------eEEEeccceeEEccCCCeee------eeeeCccccCcHHHcC-
Confidence            889999999999999999997211    345      89999999998776543321      1122345677887654 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      ..+....|.|+++..+.+++.+.
T Consensus       184 ~~~~~~~DiwSlGvilyell~g~  206 (307)
T d1a06a_         184 KPYSKAVDCWSIGVIAYILLCGY  206 (307)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcHHHhhhhhHHHHHHHhCC
Confidence            34556789999999999999873

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.74  E-value=1.7e-18  Score=176.95  Aligned_cols=183  Identities=13%  Similarity=0.053  Sum_probs=123.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+.++.-.+.+                                    
T Consensus        40 ~~~LG~G~fg~V~~a~~~~~-------~~~vAiK~i~~~~~~~~------------------------------------   76 (328)
T d3bqca1          40 VRKLGRGKYSEVFEAINITN-------NEKVVVKILKPVKKKKI------------------------------------   76 (328)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEECSSCHHHH------------------------------------
T ss_pred             EEEEecCcCeEEEEEEECCC-------CCEEEEEEECHHHHHHH------------------------------------
Confidence            47899999999999999875       79999999876532222                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc----CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP----LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~----l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                            .+|...+.++.    +++++  ++.+.-    ....-++||||++|.+|.++.+..  .......++..++.+ 
T Consensus        77 ------~~Ei~il~~l~----~hpnI--v~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~l--~e~~i~~i~~qil~a-  141 (328)
T d3bqca1          77 ------KREIKILENLR----GGPNI--ITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL--TDYDIRFYMYEILKA-  141 (328)
T ss_dssp             ------HHHHHHHHHHT----TSTTB--CCEEEEEECTTTCSEEEEEECCCSCBGGGTTTSC--CHHHHHHHHHHHHHH-
T ss_pred             ------HHHHHHHHhcc----CCCCC--cEEEEEEEecCCCceeEEEeecCCCcHHHHhcCC--CHHHHHHHHHHHHHH-
Confidence                  23433333331    22222  222211    123357899999999998764321  122223455555544 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      +..||..|++|||+||+|||++       .++     ..++|+|||++..+.+.....      .......+.++|.+..
T Consensus       142 L~~LH~~gIvHrDiKp~NILi~-------~~~-----~~vkl~DFG~a~~~~~~~~~~------~~~~t~~y~aPE~~~~  203 (328)
T d3bqca1         142 LDYCHSMGIMHRDVKPHNVMID-------HEH-----RKLRLIDWGLAEFYHPGQEYN------VRVASRYFKGPELLVD  203 (328)
T ss_dssp             HHHHHHTTEECCCCSGGGEEEE-------TTT-----TEEEECCGGGCEECCTTCCCC------SCCSCGGGCCHHHHTT
T ss_pred             HHHHhhcccccccccccceEEc-------CCC-----CeeeecccccceeccCCCccc------ccccCccccCcccccC
Confidence            8889999999999999999998       333     169999999998776543221      1123345678888766


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ...++...|.|++++.+.+++.+
T Consensus       204 ~~~~~~~~DiwslG~~l~e~~~g  226 (328)
T d3bqca1         204 YQMYDYSLDMWSLGCMLASMIFR  226 (328)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCcccchhhhhhhhHHhccC
Confidence            55556677999999999999887

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.74  E-value=4e-18  Score=170.39  Aligned_cols=193  Identities=16%  Similarity=0.127  Sum_probs=122.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.++.....                          .+.        
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~-------~~~vAiK~i~~~~~~~--------------------------~~~--------   50 (277)
T d1o6ya_          12 GEILGFGGMSEVHLARDLRL-------HRDVAVKVLRADLARD--------------------------PSF--------   50 (277)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEECSTTTTC--------------------------HHH--------
T ss_pred             eEEEeeCCCeEEEEEEECCC-------CCEEEEEEEchhhccC--------------------------HHH--------
Confidence            57999999999999999875       7999999987653211                          000        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC------CCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV------HPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGT  441 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~------t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i  441 (581)
                        ...|.+|.+.+.++     +++++  .+.+.-..      ..-+|||||++|.+|.+++..... .......++..++
T Consensus        51 --~~~~~~E~~~l~~~-----~hpni--v~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~  121 (277)
T d1o6ya_          51 --YLRFRREAQNAAAL-----NHPAI--VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC  121 (277)
T ss_dssp             --HHHHHHHHHHHHTC-----CCTTB--CCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhc-----CCCCC--CcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHH
Confidence              11245566655432     12222  22221111      124699999999999998765322 2222234555555


Q ss_pred             HHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHH
Q 008021          442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC  521 (581)
Q Consensus       442 ~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~  521 (581)
                      .+ +..+|..|++|||+||+|||++       .++      .++++|||....+........  ......-.-.+.++|.
T Consensus       122 ~a-l~~lH~~~iiHrDiKP~NIll~-------~~~------~~~l~d~~~~~~~~~~~~~~~--~~~~~~Gt~~Y~aPE~  185 (277)
T d1o6ya_         122 QA-LNFSHQNGIIHRDVKPANIMIS-------ATN------AVKVMDFGIARAIADSGNSVT--QTAAVIGTAQYLSPEQ  185 (277)
T ss_dssp             HH-HHHHHHTTEECCCCSGGGEEEE-------TTS------CEEECCCTTCEECC------------------TTCCHHH
T ss_pred             HH-HHHHHhCCccCccccCcccccC-------ccc------cceeehhhhhhhhcccccccc--ccccccCcccccCHHH
Confidence            44 8889999999999999999999       666      899999999887654432211  1112222345677777


Q ss_pred             HHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          522 TLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       522 ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +.. ..+....|.|+++..+.+++++.
T Consensus       186 ~~~-~~~~~~~DiwSlGvilyelltG~  211 (277)
T d1o6ya_         186 ARG-DSVDARSDVYSLGCVLYEVLTGE  211 (277)
T ss_dssp             HTT-CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             HcC-CCCCcceecccchHHHHHHHhCC
Confidence            643 34445679999999999999873

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.4e-18  Score=179.56  Aligned_cols=191  Identities=14%  Similarity=0.078  Sum_probs=123.5

Q ss_pred             CC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHH
Q 008021          287 FE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA  365 (581)
Q Consensus       287 fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~  365 (581)
                      |+ .+.||+|++|+||+|+.+.+       |+.||||+.+.....    +                  .    +.+    
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~-------~~~~AiK~i~k~~~~----~------------------~----~~~----   49 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVREKAT-------GRYYAMKILRKEVII----A------------------K----DEV----   49 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT-------CCEEEEEEEEHHHHH----H------------------T----TCH----
T ss_pred             cEEEEEEecCcCeEEEEEEECCC-------CCEEEEEEEchhhcc----C------------------H----HHH----
Confidence            44 57899999999999999876       799999996532000    0                  0    000    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCC--CCcEEEEeccCCccHHHHHHhhhcch-hhHHHHHHHHHH
Q 008021          366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV--HPAVLVETYEQGECVSRYVDELQGHE-RLKSALAHIGTH  442 (581)
Q Consensus       366 ~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~--t~~VLVmEyi~G~~L~~~l~~~~~~~-~~~~~la~~~i~  442 (581)
                            -.+.+|.+.+.++     ++++  +.+.+..+.  ..-++||||++|++|.+++....... .....++..++.
T Consensus        50 ------~~~~~E~~il~~l-----~hp~--Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~  116 (337)
T d1o6la_          50 ------AHTVTESRVLQNT-----RHPF--LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS  116 (337)
T ss_dssp             ------HHHHHHHHHHHSC-----CCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHhC-----CCCC--EEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhh
Confidence                  1123454444332     1233  233333222  33478999999999999886533221 122233444444


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + ++.+|..|++||||||.|||++       .+|      .++|+|||+++.+........     ...-.-.+.++|.+
T Consensus       117 a-l~ylH~~~iiHRDlKP~NILl~-------~~g------~vkl~DFG~a~~~~~~~~~~~-----~~~GT~~Y~aPE~~  177 (337)
T d1o6la_         117 A-LEYLHSRDVVYRDIKLENLMLD-------KDG------HIKITDFGLCKEGISDGATMK-----TFCGTPEYLAPEVL  177 (337)
T ss_dssp             H-HHHHHHTTCBCCCCCGGGEEEC-------TTS------CEEECCCTTCBCSCCTTCCBC-----CCEECGGGCCGGGG
T ss_pred             h-hhhhhhcCccccccCHHHeEec-------CCC------CEEEeecccccccccCCcccc-----cceeCHHHhhhhhc
Confidence            3 8889999999999999999998       777      999999999987654321100     00111245666665


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .. ..+....|.|+++..+.+++.+
T Consensus       178 ~~-~~y~~~~DiwSlGvilyeml~G  201 (337)
T d1o6la_         178 ED-NDYGRAVDWWGLGVVMYEMMCG  201 (337)
T ss_dssp             SS-SCBCTTHHHHHHHHHHHHHHHS
T ss_pred             cC-CCCChhhcccchhhHHHHHHHC
Confidence            44 3455678999999999999987

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.6e-18  Score=177.69  Aligned_cols=194  Identities=15%  Similarity=0.120  Sum_probs=121.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||.||+|+.+.+  ++...+..||||+..+.....                                     
T Consensus        42 ~~~lG~G~fG~Vy~a~~~~~--~~~~~~~~vavK~~~~~~~~~-------------------------------------   82 (325)
T d1rjba_          42 GKVLGSGAFGKVMNATAYGI--SKTGVSIQVAVKMLKEKADSS-------------------------------------   82 (325)
T ss_dssp             EEEEEECSSEEEEEEEEESC--SSSSCEEEEEEEEECC------------------------------------------
T ss_pred             eeEEeeCCCeEEEEEEEcCC--CcccceeEEEEEEeccccCHH-------------------------------------
Confidence            47899999999999998753  212224579999876542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc------------------
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG------------------  428 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~------------------  428 (581)
                       ..-.+.+|...+.++    .++++|.  +.+.  .....-+|||||++|++|.+++.....                  
T Consensus        83 -~~~~~~~E~~~l~~l----~~HpnIv--~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  155 (325)
T d1rjba_          83 -EREALMSELKMMTQL----GSHENIV--NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE  155 (325)
T ss_dssp             --CHHHHHHHHHHHHH----CCCTTBC--CEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC----------------
T ss_pred             -HHHHHHHHHHHHHHh----cCCCcEe--EEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccc
Confidence             011244565555544    1233332  2222  223455899999999999999864321                  


Q ss_pred             ------chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHH
Q 008021          429 ------HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVN  502 (581)
Q Consensus       429 ------~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~  502 (581)
                            .......++..++.+ +..||..|++||||||+|||++       .+|      .++|+|||+++.........
T Consensus       156 ~~~~~l~~~~~~~i~~qi~~g-l~yLH~~~IiHRDlKp~Nill~-------~~~------~~Kl~DFGla~~~~~~~~~~  221 (325)
T d1rjba_         156 EDLNVLTFEDLLCFAYQVAKG-MEFLEFKSCVHRDLAARNVLVT-------HGK------VVKICDFGLARDIMSDSNYV  221 (325)
T ss_dssp             -----CCHHHHHHHHHHHHHH-HHHHHHTTEEETTCSGGGEEEE-------TTT------EEEECCCGGGSCGGGCTTSE
T ss_pred             cccCCCCHHHHHHHHHHHHHH-HHHHHhCCeeeccCchhccccc-------cCC------eEEEeeccccccccCCCcee
Confidence                  001112344444443 8889999999999999999998       677      99999999998765433211


Q ss_pred             HHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       503 l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ...   ...-.-.+.++|.+.. +.+....|.|+|+..+.++++
T Consensus       222 ~~~---~~~gt~~y~aPE~l~~-~~~~~~~DiwS~Gvil~emlt  261 (325)
T d1rjba_         222 VRG---NARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFS  261 (325)
T ss_dssp             EET---TEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTT
T ss_pred             eec---cccCCCccCChHHHcC-CCCCcceeccchhHHHHHHHh
Confidence            000   0000123566776654 445556799999999999885

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.5e-18  Score=173.56  Aligned_cols=206  Identities=16%  Similarity=0.125  Sum_probs=130.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+........                    .+..   ..        
T Consensus        15 ~~~lG~G~fg~Vy~~~~~~~-------~~~~AvK~i~~~~~~~--------------------~~~~---~~--------   56 (293)
T d1jksa_          15 GEELGSGQFAVVKKCREKST-------GLQYAAKFIKKRRTKS--------------------SRRG---VS--------   56 (293)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------CCEEEEEEEEBCSSTT--------------------CSSS---BC--------
T ss_pred             eEEEecCCCeEEEEEEECCC-------CCEEEEEEEEhhhcch--------------------hhhh---HH--------
Confidence            47899999999999999875       7999999976542110                    0000   00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        .-++.+|++.+.++.     +++|  .+.+.  .....-+|||||++|++|.+++..... .......++..++.+ +
T Consensus        57 --~~~~~~E~~il~~l~-----HpnI--v~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~a-l  126 (293)
T d1jksa_          57 --REDIEREVSILKEIQ-----HPNV--ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG-V  126 (293)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTB--CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhCC-----CCCC--CcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHH-H
Confidence              012345665555442     3332  23332  223345799999999999999865322 222223344555544 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.||..|++|||+||.|||+.       .+|  ..++.++++|||++..++......      .....-.+.++|.+.. 
T Consensus       127 ~yLH~~~ivHrDiKp~Nill~-------~~~--~~~~~vkl~DfG~a~~~~~~~~~~------~~~~t~~y~APE~~~~-  190 (293)
T d1jksa_         127 YYLHSLQIAHFDLKPENIMLL-------DRN--VPKPRIKIIDFGLAHKIDFGNEFK------NIFGTPEFVAPEIVNY-  190 (293)
T ss_dssp             HHHHHTTEECCCCSGGGEEES-------CSS--SSSCCEEECCCTTCEECTTSCBCS------CCCCCGGGCCHHHHTT-
T ss_pred             HhhhhcceeecccccceEEEe-------cCC--CcccceEecchhhhhhcCCCcccc------ccCCCCcccCHHHHcC-
Confidence            889999999999999999998       332  112379999999998876543211      0112235677777654 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILL  558 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll  558 (581)
                      ..+....|.|+++..+.+++.+.  +...+..+++
T Consensus       191 ~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~  225 (293)
T d1jksa_         191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETL  225 (293)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHH
Confidence            44556679999999999999873  3333344443

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.5e-18  Score=174.33  Aligned_cols=194  Identities=18%  Similarity=0.197  Sum_probs=120.0

Q ss_pred             cCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHH
Q 008021          286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA  365 (581)
Q Consensus       286 ~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~  365 (581)
                      .+|++.||+|++|+||+|+++.+     ..++.||||+.+....+.                           +.     
T Consensus         9 ~le~k~iG~G~fG~Vy~~~~~~~-----~~~~~vAvK~~~~~~~~~---------------------------~~-----   51 (277)
T d1xbba_           9 TLEDKELGSGNFGTVKKGYYQMK-----KVVKTVAVKILKNEANDP---------------------------AL-----   51 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEEECS-----SSEEEEEEEEEC-----C---------------------------HH-----
T ss_pred             eecCCCcccCCCeEEEEEEEccC-----CcCeEEEEEEEChhhCCH---------------------------HH-----
Confidence            45677899999999999998643     125899999976432110                           00     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHH
Q 008021          366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHA  443 (581)
Q Consensus       366 ~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a  443 (581)
                           .-+|.+|++.+.++     ++++|.  +.+.- .....+|||||++|++|.+++..... .......++..++.+
T Consensus        52 -----~~~~~~E~~il~~l-----~HpnIv--~~~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~g  119 (277)
T d1xbba_          52 -----KDELLAEANVMQQL-----DNPYIV--RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG  119 (277)
T ss_dssp             -----HHHHHHHHHHHHTC-----CCTTBC--CEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHhC-----CCCCCc--eEEEEeccCCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence                 11345666666544     233322  22211 12345899999999999999865322 222223444444444


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc-HHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD-GRTAAECT  522 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D-~~~~~e~l  522 (581)
                       ++.||..|++|||+||.|||++       .+|      .++++|||+++.+..........   ....+. .+.++|.+
T Consensus       120 -l~ylH~~~iiHrDlKp~Nill~-------~~~------~~kl~DFGla~~~~~~~~~~~~~---~~~~gt~~y~APE~l  182 (277)
T d1xbba_         120 -MKYLEESNFVHRDLAARNVLLV-------TQH------YAKISDFGLSKALRADENYYKAQ---THGKWPVKWYAPECI  182 (277)
T ss_dssp             -HHHHHHTTEECSCCSGGGEEEE-------ETT------EEEECCCTTCEECCTTCSEEEC-------CCCGGGCCHHHH
T ss_pred             -HhhHHhCCcccCCCcchhhccc-------ccC------cccccchhhhhhccccccccccc---cccCCCceecCchhh
Confidence             8889999999999999999999       677      99999999998765432110000   000111 24455655


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .. ..+....|.|+|+..+.++++
T Consensus       183 ~~-~~~~~~sDiwS~Gv~l~ellt  205 (277)
T d1xbba_         183 NY-YKFSSKSDVWSFGVLMWEAFS  205 (277)
T ss_dssp             HH-CEEEHHHHHHHHHHHHHHHHT
T ss_pred             cC-CCCCchhhhccchhhhhHHhh
Confidence            43 333445688888888888765

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-18  Score=175.39  Aligned_cols=188  Identities=16%  Similarity=0.135  Sum_probs=118.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||.||+|+++          ..||||+.+......                           +..       
T Consensus        13 ~~~lG~G~fg~Vy~~~~~----------~~vAvK~~~~~~~~~---------------------------~~~-------   48 (276)
T d1uwha_          13 GQRIGSGSFGTVYKGKWH----------GDVAVKMLNVTAPTP---------------------------QQL-------   48 (276)
T ss_dssp             CSEEEECSSCEEEEEESS----------SEEEEEECCCSSCCT---------------------------THH-------
T ss_pred             EEEEeeCCCcEEEEEEEC----------CEEEEEEEEcccCCH---------------------------HHH-------
Confidence            578999999999999863          469999976542110                           001       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc-cCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY-PLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~-~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l  445 (581)
                         -+|.+|+..+.++     ++++|.  +.+. .....-+|||||++|++|.+++......  ......++..++++ +
T Consensus        49 ---~~~~~E~~~l~~l-----~HpnIv--~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~g-l  117 (276)
T d1uwha_          49 ---QAFKNEVGVLRKT-----RHVNIL--LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG-M  117 (276)
T ss_dssp             ---HHHHHHHHHHTTC-----CCTTBC--CEEEEECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhC-----CCCCEe--eeeEEEeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHH-H
Confidence               1245566665543     233332  2221 1123458999999999999998643221  12223445454444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.||..|++||||||.|||++       .++      .++|+|||++..++........   ....-.-.+.++|.+...
T Consensus       118 ~yLH~~~ivHrDlKp~NiLl~-------~~~------~~Kl~DFGla~~~~~~~~~~~~---~~~~gt~~y~APE~l~~~  181 (276)
T d1uwha_         118 DYLHAKSIIHRDLKSNNIFLH-------EDL------TVKIGDFGLATVKSRWSGSHQF---EQLSGSILWMAPEVIRMQ  181 (276)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEE-------TTS------SEEECCCCCSCC---------------CCCCGGGCCHHHHTTC
T ss_pred             HHHhcCCEeccccCHHHEEEc-------CCC------CEEEccccceeeccccCCcccc---cccccCcccCCHHHHhcc
Confidence            889999999999999999998       677      8999999999877654332211   111112246677776432


Q ss_pred             c--CCCCCCCHHHHHHHHHHhhhH
Q 008021          526 S--KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       526 ~--~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .  .+....|.++|+..+.+++++
T Consensus       182 ~~~~~~~~sDiwS~Gv~l~el~tg  205 (276)
T d1uwha_         182 DKNPYSFQSDVYAFGIVLYELMTG  205 (276)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCchhhhhhhHHHHHHHHHC
Confidence            2  233456999999999999987

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=2e-18  Score=179.16  Aligned_cols=191  Identities=15%  Similarity=0.121  Sum_probs=126.2

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ++|+ -+.||+|++|+||+|+.+.+       |+.||||+.+....    .+.                      +.+  
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~-------g~~~AvK~i~~~~~----~~~----------------------~~~--   85 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKES-------GNHYAMKILDKQKV----VKL----------------------KQI--   85 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTT-------CCEEEEEEEEHHHH----HHT----------------------TCH--
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCC-------CCEEEEEEEchHHc----cCH----------------------HHH--
Confidence            4455 47899999999999999875       79999998653210    000                      000  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                              -.+.+|.+.+.++     +++++  .+.+.  .....-++||||++|+++.+++..... .......++..+
T Consensus        86 --------~~~~~E~~il~~l-----~hpnI--v~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi  150 (350)
T d1rdqe_          86 --------EHTLNEKRILQAV-----NFPFL--VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI  150 (350)
T ss_dssp             --------HHHHHHHHHHTTC-----CCTTB--CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHHc-----CCCcE--eecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHH
Confidence                    0133455444322     23332  22222  223345799999999999998765322 112223344444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ +..||..|++||||||.|||++       .+|      .++|+|||+++.++.....        ..-.-.+.++|
T Consensus       151 ~~a-L~yLH~~~iiHRDIKP~NILl~-------~~g------~ikL~DFG~a~~~~~~~~~--------~~Gt~~Y~APE  208 (350)
T d1rdqe_         151 VLT-FEYLHSLDLIYRDLKPENLLID-------QQG------YIQVTDFGFAKRVKGRTWT--------LCGTPEALAPE  208 (350)
T ss_dssp             HHH-HHHHHHTTEECCCCSGGGEEEC-------TTS------CEEECCCTTCEECSSCBCC--------CEECGGGCCHH
T ss_pred             HHH-HHHHHhCCEecCcCCHHHcccC-------CCC------CEEeeeceeeeeccccccc--------ccCccccCCHH
Confidence            444 8889999999999999999998       677      8999999999987653211        11123567788


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      .+.. ..+....|.|+++..+.+++.+.
T Consensus       209 ~~~~-~~~~~~~DiwSlGvilyemltG~  235 (350)
T d1rdqe_         209 IILS-KGYNKAVDWWALGVLIYEMAAGY  235 (350)
T ss_dssp             HHTT-CCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             HHcC-CCCCccccccchhHHHHHHHhCC
Confidence            7754 33455679999999999999873

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=6.1e-18  Score=169.95  Aligned_cols=193  Identities=19%  Similarity=0.241  Sum_probs=118.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+++.+ ++  .....||||+.+++..+.                                     
T Consensus        12 ~~~iG~G~fG~Vy~~~~~~~-~~--~~~~~vAvK~~~~~~~~~-------------------------------------   51 (283)
T d1mqba_          12 QKVIGAGEFGEVYKGMLKTS-SG--KKEVPVAIKTLKAGYTEK-------------------------------------   51 (283)
T ss_dssp             EEEEEECSSSEEEEEEEEC------CCEEEEEEEEECTTCCHH-------------------------------------
T ss_pred             eeEEeeCCCeEEEEEEEeCC-CC--EEEEEEEEEEECcccChH-------------------------------------
Confidence            57899999999999998763 11  112579999987653211                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                       .+.+|.+|++.+.++.     +++|.  +.+.  ......++||||++|.++.+++......  ......++..++. .
T Consensus        52 -~~~~~~~E~~il~~l~-----H~nIv--~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~-g  122 (283)
T d1mqba_          52 -QRVDFLGEAGIMGQFS-----HHNII--RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA-G  122 (283)
T ss_dssp             -HHHHHHHHHHHHHTCC-----CTTBC--CEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHH-H
T ss_pred             -HHHHHHHHHHHHHhcC-----CCCEe--eeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHH-h
Confidence             1234567776665542     33322  2221  1234558999999999999877543221  1122234444443 4


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhh-cHHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR-DGRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~-D~~~~~e~ll  523 (581)
                      ++.+|..|++||||||+|||++       .++      .++|+|||+++.+..........   ....+ -.+.++|.+.
T Consensus       123 l~~lH~~~iiHrDlKp~NILl~-------~~~------~~Kl~DFGla~~~~~~~~~~~~~---~~~~gt~~Y~APE~l~  186 (283)
T d1mqba_         123 MKYLANMNYVHRDLAARNILVN-------SNL------VCKVSDFGLSRVLEDDPEATYTT---SGGKIPIRWTAPEAIS  186 (283)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEEC-------TTC------CEEECCCCC--------------------CCCGGGSCHHHHH
T ss_pred             hhhccccccccCccccceEEEC-------CCC------eEEEcccchhhcccCCCccceEe---ccCCCCccccCHHHHc
Confidence            8889999999999999999999       677      89999999998876544332210   01111 2466777664


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       -..+....|.++|+..+.+++.+
T Consensus       187 -~~~~~~~sDI~S~Gvil~el~t~  209 (283)
T d1mqba_         187 -YRKFTSASDVWSFGIVMWEVMTY  209 (283)
T ss_dssp             -SCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             -cCCCCCcccccccHHHHHHHHhC
Confidence             34555567999999999998864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.6e-18  Score=170.97  Aligned_cols=189  Identities=16%  Similarity=0.172  Sum_probs=121.9

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      +++. .+.||+|++|+||+|++++        +++||||+.+.+-..                                 
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~--------~~~vAiK~l~~~~~~---------------------------------   55 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNG--------TTRVAIKTLKPGTMS---------------------------------   55 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT--------TEEEEEEECCTTSSC---------------------------------
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECC--------CCEEEEEEECcccCC---------------------------------
Confidence            4454 6789999999999999975        478999997654210                                 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHI  439 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~  439 (581)
                             +-+|.+|+..+.++.     +++|  .+.+.- ...+.++||||++|+++.+++.....   .......++..
T Consensus        56 -------~~~~~~E~~~l~~l~-----h~nI--v~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~  121 (285)
T d1fmka3          56 -------PEAFLQEAQVMKKLR-----HEKL--VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ  121 (285)
T ss_dssp             -------HHHHHHHHHHHHHCC-----CTTB--CCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHhcc-----cCCE--eEEEEEEecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHH
Confidence                   013556777766542     2222  222221 23456899999999999988754221   11223345555


Q ss_pred             HHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       440 ~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      ++.+ ++.||..|++|+|+||.|||++       .+|      +++|+|||++..+.+.......    .....-.+.++
T Consensus       122 i~~g-l~~LH~~~ivH~DlKp~NIll~-------~~~------~~kl~DfGla~~~~~~~~~~~~----~~~gt~~y~aP  183 (285)
T d1fmka3         122 IASG-MAYVERMNYVHRDLRAANILVG-------ENL------VCKVADFGLARLIEDNEYTARQ----GAKFPIKWTAP  183 (285)
T ss_dssp             HHHH-HHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCCCTTC------------------CCGGGSCH
T ss_pred             HHHH-HHHHhhhheecccccceEEEEC-------CCC------cEEEcccchhhhccCCCceeec----cccccccccCh
Confidence            4444 8899999999999999999999       777      8999999999877544322211    01112235666


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+.. +......|.++|+..+-+++.+
T Consensus       184 E~~~~-~~~~~ksDI~S~Giil~el~t~  210 (285)
T d1fmka3         184 EAALY-GRFTIKSDVWSFGILLTELTTK  210 (285)
T ss_dssp             HHHHH-CCCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHhC-CCCCcHHhhhcchHHHHHHHhC
Confidence            76644 4455567999999999998864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.2e-18  Score=174.04  Aligned_cols=197  Identities=17%  Similarity=0.103  Sum_probs=111.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|+.+..  +....++.||||+.+.+....                                     
T Consensus        18 ~~~iG~G~fG~Vy~a~~~~~--~~~~~~~~vAvK~l~~~~~~~-------------------------------------   58 (299)
T d1ywna1          18 GKPLGRGAFGQVIEADAFGI--DKTATCRTVAVKMLKEGATHS-------------------------------------   58 (299)
T ss_dssp             EEEEEECSSCEEEEEEEEST--TSSSCEEEEEEEEC----CHH-------------------------------------
T ss_pred             eeEEeecCCeEEEEEEEcCC--CcccCCeEEEEEEEccccCcH-------------------------------------
Confidence            57899999999999998642  222346899999876542110                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccc-ccccccCCCCcEEEEeccCCccHHHHHHhhhcc-----------------h
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSF-PKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-----------------E  430 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~v-P~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------------~  430 (581)
                       .+-.+.+|...+.++.    .++.+.. -....+-...-++||||++|++|.+++......                 .
T Consensus        59 -~~~~~~~e~~~l~~~~----~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~  133 (299)
T d1ywna1          59 -EHRALMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL  133 (299)
T ss_dssp             -HHHHHHHHHHHHHHHC----CCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCH
T ss_pred             -HHHHHHHHHHHHHhhc----CCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCH
Confidence             0011233444443332    2222211 111111122357999999999999998653210                 0


Q ss_pred             hhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHH
Q 008021          431 RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV  510 (581)
Q Consensus       431 ~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al  510 (581)
                      .....++..++.+ ++.||..|++||||||.|||++       .+|      .++|+|||+++............   ..
T Consensus       134 ~~~~~~~~qi~~g-l~ylH~~~ivHrDlKp~NILl~-------~~~------~~Kl~DFGla~~~~~~~~~~~~~---~~  196 (299)
T d1ywna1         134 EHLICYSFQVAKG-MEFLASRKCIHRDLAARNILLS-------EKN------VVKICDFGLARDIYKDPDYVRKG---DA  196 (299)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHTTCCCSCCCGGGEEEC-------GGG------CEEECC------CCSCTTSCCTT---SC
T ss_pred             HHHHHHHHHHHHH-HHHHHhCCCcCCcCCccceeEC-------CCC------cEEEccCcchhhccccccccccC---ce
Confidence            1112334444443 7889999999999999999998       777      89999999987654322110000   00


Q ss_pred             HhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       511 ~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .-.-.+.++|.+.. .......|.|+|+..+.+++++
T Consensus       197 ~gt~~y~APE~l~~-~~~~~~sDiwS~Gvil~ellt~  232 (299)
T d1ywna1         197 RLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSL  232 (299)
T ss_dssp             CCGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTT
T ss_pred             eeCccccchhHhhc-CCCCcccceeehHHHHHHHHhC
Confidence            01123556666544 4444556888888888888754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=9.5e-19  Score=175.05  Aligned_cols=185  Identities=15%  Similarity=0.128  Sum_probs=119.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+++.        ++.||||+.+.+-..                                      
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~--------------------------------------   51 (272)
T d1qpca_          18 VERLGAGQFGEVWMGYYNG--------HTKVAVKSLKQGSMS--------------------------------------   51 (272)
T ss_dssp             EEEEEEETTEEEEEEEETT--------TEEEEEEEECTTSSC--------------------------------------
T ss_pred             eEEEecCCCcEEEEEEECC--------CCEEEEEEEccCcCC--------------------------------------
Confidence            4789999999999999864        589999997654110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~a~  444 (581)
                        +-+|.+|++.+.++.     +++|  .+.+.- ...+-+|||||++|++|.+++.....   .......++..++++ 
T Consensus        52 --~~~~~~E~~~l~~l~-----HpnI--v~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~g-  121 (272)
T d1qpca_          52 --PDAFLAEANLMKQLQ-----HQRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG-  121 (272)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTB--CCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhCC-----CCCE--eEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHH-
Confidence              012455666665542     2322  122221 12345799999999999987643221   112223445554444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ++.||..|++||||||.|||++       .++      .++|+|||+++.+++.......    .....-.+.++|.+..
T Consensus       122 l~~lH~~~ivHrDiKp~NIll~-------~~~------~~Kl~DFGla~~~~~~~~~~~~----~~~gt~~y~APE~~~~  184 (272)
T d1qpca_         122 MAFIEERNYIHRDLRAANILVS-------DTL------SCKIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAINY  184 (272)
T ss_dssp             HHHHHHTTEECSCCSGGGEEEC-------TTS------CEEECCCTTCEECSSSCEECCT----TCCCCTTTSCHHHHHH
T ss_pred             HHHHHhCCcccCccchhheeee-------ccc------ceeeccccceEEccCCcccccc----ccCCcccccChHHHhC
Confidence            8889999999999999999999       677      8999999999877543211000    0001113556666543


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       +.+....|.++|+..+.+++++
T Consensus       185 -~~~~~~sDvwS~Gvvl~ellt~  206 (272)
T d1qpca_         185 -GTFTIKSDVWSFGILLTEIVTH  206 (272)
T ss_dssp             -CEECHHHHHHHHHHHHHHHHTT
T ss_pred             -CCCCchhhhhhhHHHHHHHHhC
Confidence             4455566888898888888864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=4.2e-18  Score=175.37  Aligned_cols=188  Identities=20%  Similarity=0.152  Sum_probs=120.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+......                               ...+.+
T Consensus        23 i~~lG~G~fg~V~~~~~~~~-------~~~vAiK~i~~~~~~~-------------------------------~~~~~~   64 (346)
T d1cm8a_          23 LQPVGSGAYGAVCSAVDGRT-------GAKVAIKKLYRPFQSE-------------------------------LFAKRA   64 (346)
T ss_dssp             EEEC------CEEEEEETTT-------CCEEEEEECSSTTSSH-------------------------------HHHHHH
T ss_pred             EEEEecCCCeEEEEEEECCC-------CCEEEEEEEchhhcCh-------------------------------HHHHHH
Confidence            36899999999999999875       7999999976542111                               011112


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-cccccccc-----CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYP-----LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~-----l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~  442 (581)
                            .+|.+.+.++.     ++++ .+-..+..     ....-+|||||+ |..+.++.+...-.......++..++.
T Consensus        65 ------~~Ei~il~~l~-----hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~  132 (346)
T d1cm8a_          65 ------YRELRLLKHMR-----HENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLK  132 (346)
T ss_dssp             ------HHHHHHHHHCC-----BTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHhcC-----CCCeeEEEEEeccCccccccceEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHH
Confidence                  23444443321     2221 11111111     112348999999 777888775433233333445555555


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + ++.||..|++|||+||+|||++       .++      .++++|||++...+.....        ....-.+.++|.+
T Consensus       133 a-L~~LH~~~IiHrDiKp~NIL~~-------~~~------~~kl~Dfg~a~~~~~~~~~--------~~~t~~y~aPE~~  190 (346)
T d1cm8a_         133 G-LRYIHAAGIIHRDLKPGNLAVN-------EDC------ELKILDFGLARQADSEMTG--------YVVTRWYRAPEVI  190 (346)
T ss_dssp             H-HHHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCTTCEECCSSCCS--------SCSCGGGCCTHHH
T ss_pred             H-HHHHHhCCCcccccCcchhhcc-------ccc------ccccccccceeccCCcccc--------ccccccccCHHHH
Confidence            4 7889999999999999999998       677      8999999999987654321        1234457788888


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhhHh
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPSGV  548 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~~~  548 (581)
                      +.........|.|+++..+.+++.+-
T Consensus       191 ~~~~~~~~~~DiwSlGvil~ell~g~  216 (346)
T d1cm8a_         191 LNWMRYTQTVDIWSVGCIMAEMITGK  216 (346)
T ss_dssp             HTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCCCccchhhcchHHHHHHHHCc
Confidence            77666677889999999999999873

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.72  E-value=3.2e-18  Score=171.49  Aligned_cols=205  Identities=13%  Similarity=0.032  Sum_probs=134.6

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||+|++|.||+|+.+.        |+.||||+.+......                           +.        
T Consensus         7 ~~~iG~G~fg~Vy~~~~~~--------~~~vAvK~i~~~~~~~---------------------------~~--------   43 (286)
T d1ob3a_           7 LEKIGEGTYGVVYKAQNNY--------GETFALKKIRLEKEDE---------------------------GI--------   43 (286)
T ss_dssp             EEEEEEETTEEEEEEEETT--------SCEEEEEEECCSSGGG---------------------------CC--------
T ss_pred             ccEEecCCCcEEEEEEeCC--------CCEEEEEEEehhhcCh---------------------------HH--------
Confidence            4789999999999999864        6999999975431110                           00        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~i~a~l  445 (581)
                        +-.+.+|...+.++     .+++  +.+.+.  ......+++|||+.|..+..+...... .......++..++.+ +
T Consensus        44 --~~~~~~E~~il~~l-----~hpn--Iv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~-L  113 (286)
T d1ob3a_          44 --PSTTIREISILKEL-----KHSN--IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNG-I  113 (286)
T ss_dssp             --CHHHHHHHHGGGGC-----CCTT--BCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCc--EEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHH-H
Confidence              01234455544433     1222  223332  234556899999999888777543221 222223455555554 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.||..|++|||+||.|||++       .+|      .++++|||++...+.......     .......+.++|.+...
T Consensus       114 ~~LH~~~IvHrDiKp~NIll~-------~~~------~~kl~DfG~a~~~~~~~~~~~-----~~~~~~~y~~pE~~~~~  175 (286)
T d1ob3a_         114 AYCHDRRVLHRDLKPQNLLIN-------REG------ELKIADFGLARAFGIPVRKYT-----HEIVTLWYRAPDVLMGS  175 (286)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEC-------TTS------CEEECCTTHHHHHCC--------------CCCTTCCHHHHTTC
T ss_pred             HHhccCcEEecCCCCceeeEc-------CCC------CEEecccccceecccCccccc-----eecccchhhhHHHHhCC
Confidence            899999999999999999998       677      899999999987765432211     11344567788888766


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      ...+...|.|+++..+.+++.+.  ++..+..+++..+.+.
T Consensus       176 ~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~  216 (286)
T d1ob3a_         176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI  216 (286)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence            66667789999999999999883  5555555666555443

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.7e-18  Score=175.01  Aligned_cols=203  Identities=17%  Similarity=0.099  Sum_probs=128.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+++..   ..+                       +..       
T Consensus         7 ~~~iG~G~fg~Vy~~~~~~t-------~~~vAvK~i~k~~~---~~~-----------------------~~~-------   46 (320)
T d1xjda_           7 HKMLGKGSFGKVFLAEFKKT-------NQFFAIKALKKDVV---LMD-----------------------DDV-------   46 (320)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------TEEEEEEEEEHHHH---HHT-----------------------TCH-------
T ss_pred             eeEEecCCCcEEEEEEECCC-------CCEEEEEEEchhhc---cCh-----------------------HHH-------
Confidence            57999999999999999876       79999999764310   000                       000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhcch-hhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQGHE-RLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~~~-~~~~~la~~~i~a~l  445 (581)
                         -.+.+|...+.+.    .++++|  .+.+.-  ....-++||||++|++|.+++....... .....++..++.+ +
T Consensus        47 ---~~~~~e~~~l~~~----~~hp~I--v~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~a-l  116 (320)
T d1xjda_          47 ---ECTMVEKRVLSLA----WEHPFL--THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG-L  116 (320)
T ss_dssp             ---HHHHHHHHHHHHH----TTCTTB--CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHHh----CCCCcE--EEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHH-H
Confidence               0112222222111    123332  233322  2234579999999999999986533221 2223344444443 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.||..|++|||+||.|||++       .+|      +++|+|||+++.+.......-     ...-.-.+.++|.+.. 
T Consensus       117 ~ylH~~~iiHrDikp~NiL~~-------~~~------~~kl~DFG~a~~~~~~~~~~~-----~~~gt~~y~aPE~~~~-  177 (320)
T d1xjda_         117 QFLHSKGIVYRDLKLDNILLD-------KDG------HIKIADFGMCKENMLGDAKTN-----TFCGTPDYIAPEILLG-  177 (320)
T ss_dssp             HHHHHTTCBCCCCCGGGEEEC-------TTS------CEEECCCTTCBCCCCTTCCBC-----CCCSCGGGCCHHHHTT-
T ss_pred             HHHHhCCeeeccCcccceeec-------CCC------ceeccccchhhhccccccccc-----ccCCCCCcCCHHHHcC-
Confidence            889999999999999999998       677      899999999987654321110     0011234567777654 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSA  560 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~  560 (581)
                      ..+....|.|+++..+.+++.+-  +......+++..
T Consensus       178 ~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~  214 (320)
T d1xjda_         178 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS  214 (320)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            44556779999999999999883  444444444433

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.72  E-value=6.4e-18  Score=171.15  Aligned_cols=197  Identities=17%  Similarity=0.127  Sum_probs=125.3

Q ss_pred             CC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHH
Q 008021          287 FE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA  365 (581)
Q Consensus       287 fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~  365 (581)
                      |+ .+.||+|+||.||+|+.+..  ....+++.||||+.+++....                                  
T Consensus        15 ~~~~~~lG~G~fG~Vy~a~~~~~--~~~~~~~~vAvK~i~~~~~~~----------------------------------   58 (301)
T d1lufa_          15 IEYVRDIGEGAFGRVFQARAPGL--LPYEPFTMVAVKMLKEEASAD----------------------------------   58 (301)
T ss_dssp             CEEEEEEEECSSCEEEEEEEETS--STTSSEEEEEEEECCTTCCHH----------------------------------
T ss_pred             cEEeEEEeeCCCeEEEEEEECCC--ccCCCCeEEEEEEEChhcChH----------------------------------
Confidence            44 57899999999999998632  011235899999976553211                                  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-----------------
Q 008021          366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-----------------  428 (581)
Q Consensus       366 ~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------  428 (581)
                          .+-+|.+|+..+.++.     ++++.-..-+.......+++|||++|++|.+++.....                 
T Consensus        59 ----~~~~~~~E~~il~~l~-----h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~  129 (301)
T d1lufa_          59 ----MQADFQREAALMAEFD-----NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV  129 (301)
T ss_dssp             ----HHHHHHHHHHHHHTCC-----CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC-----------------
T ss_pred             ----HHHHHHHHHHHHHhcC-----CCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhc
Confidence                0123556766665432     23332222222334566899999999999998854211                 


Q ss_pred             --------chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhH
Q 008021          429 --------HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR  500 (581)
Q Consensus       429 --------~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r  500 (581)
                              .......++..++. .++.+|..|++|||+||.|||++       .++      .++|.|||++..+.+...
T Consensus       130 ~~~~~~~l~~~~~~~i~~qi~~-gl~ylH~~~ivHrDlKp~NILld-------~~~------~~Kl~DFGls~~~~~~~~  195 (301)
T d1lufa_         130 SSPGPPPLSCAEQLCIARQVAA-GMAYLSERKFVHRDLATRNCLVG-------ENM------VVKIADFGLSRNIYSADY  195 (301)
T ss_dssp             -----CCCCHHHHHHHHHHHHH-HHHHHHHTTCCCSCCSGGGEEEC-------GGG------CEEECCCSCHHHHTGGGC
T ss_pred             cccCCCCCCHHHHHHHHHHHHH-HhhhcccCCeEeeEEcccceEEC-------CCC------cEEEccchhheeccCCcc
Confidence                    00112234444443 37889999999999999999999       677      899999999987765543


Q ss_pred             HHHHHHHHHHHhh-cHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          501 VNLVEFFKAVARR-DGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       501 ~~l~~l~~Al~~~-D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ....    ....+ -.+.+.|.+. ...+....|.|+|+..+.+++.+
T Consensus       196 ~~~~----~~~~~~~~y~aPE~~~-~~~~t~ksDVwS~Gvvl~ell~~  238 (301)
T d1lufa_         196 YKAD----GNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFSY  238 (301)
T ss_dssp             BC--------CCBCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             cccc----CCCCcCcCcCCHHHHc-cCCCChhhhhccchhhHHHHHcc
Confidence            2211    01111 2344555554 34455567999999999998765

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.1e-18  Score=174.85  Aligned_cols=197  Identities=16%  Similarity=0.111  Sum_probs=124.8

Q ss_pred             CCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccC
Q 008021          277 GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLR  356 (581)
Q Consensus       277 G~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~  356 (581)
                      |.+.+.-|..|++ -||+|++|.||+|+++.+       |+.||||+....-.                          .
T Consensus         3 g~~~~gry~~~~~-~iG~G~fg~Vy~~~~~~~-------~~~va~K~i~~~~~--------------------------~   48 (270)
T d1t4ha_           3 GMSNDGRFLKFDI-EIGRGSFKTVYKGLDTET-------TVEVAWCELQDRKL--------------------------T   48 (270)
T ss_dssp             EECTTSCEEEEEE-EEEECSSEEEEEEEETTT-------CCEEEEEEEEGGGS--------------------------C
T ss_pred             CcCCCCCEEEeee-EEecCcCcEEEEEEECCC-------CeEEEEEEEchhhC--------------------------C
Confidence            3334444555653 599999999999999875       79999998654310                          0


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC---C-C--CcEEEEeccCCccHHHHHHhhhc-c
Q 008021          357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL---V-H--PAVLVETYEQGECVSRYVDELQG-H  429 (581)
Q Consensus       357 l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l---~-t--~~VLVmEyi~G~~L~~~l~~~~~-~  429 (581)
                       .+..          -+|.+|++.+.++.     +++  +.+.+.-+   . .  .-++||||++|++|.+++..... .
T Consensus        49 -~~~~----------~~~~~E~~il~~l~-----Hpn--Iv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~  110 (270)
T d1t4ha_          49 -KSER----------QRFKEEAEMLKGLQ-----HPN--IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK  110 (270)
T ss_dssp             -HHHH----------HHHHHHHHHHTTCC-----CTT--BCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCC
T ss_pred             -HHHH----------HHHHHHHHHHHhCC-----CCC--eeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhcccccc
Confidence             0000          12455665554331     232  22333211   1 1  12789999999999999865322 1


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCC--eEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDN--FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF  507 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G--~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~  507 (581)
                      ......++..++.+ ++.||..|  ++||||||+|||++   .   ++|      .++|+|||+++.........++   
T Consensus       111 ~~~~~~~~~qi~~g-l~yLH~~~~~IiHrDiKp~NILl~---~---~~~------~~Kl~DFGla~~~~~~~~~~~~---  174 (270)
T d1t4ha_         111 IKVLRSWCRQILKG-LQFLHTRTPPIIHRDLKCDNIFIT---G---PTG------SVKIGDLGLATLKRASFAKAVI---  174 (270)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHTSSSCCCCSCCCGGGEEES---S---TTS------CEEECCTTGGGGCCTTSBEESC---
T ss_pred             HHHHHHHHHHHHHH-HHHHHHCCCCEEeCCcChhhceee---C---CCC------CEEEeecCcceeccCCccCCcc---
Confidence            22223344454444 78899998  99999999999996   1   356      8999999999765543322111   


Q ss_pred             HHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       508 ~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                          -.-.+.++|.+.  +.+....|.|+|+..+.+++.+
T Consensus       175 ----GT~~Y~aPE~~~--~~~~~~~DIwSlGvilyel~~g  208 (270)
T d1t4ha_         175 ----GTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATS  208 (270)
T ss_dssp             ----SSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ----cCccccCHHHhC--CCCCCcCchhhHHHHHHHHHHC
Confidence                122345666542  3455677999999999999887

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.5e-18  Score=173.51  Aligned_cols=188  Identities=20%  Similarity=0.242  Sum_probs=118.6

Q ss_pred             eecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHHHH
Q 008021          291 PVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS  370 (581)
Q Consensus       291 PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l~~  370 (581)
                      .||+|+||.||+|+.+.+     .++..||||+.+++....                            ..         
T Consensus        16 ~iG~G~fg~Vy~~~~~~~-----~~~~~vAvK~l~~~~~~~----------------------------~~---------   53 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMR-----KKQIDVAIKVLKQGTEKA----------------------------DT---------   53 (285)
T ss_dssp             EEECCTTEEEEEEEEC--------CCEEEEEEEECSSCCHH----------------------------HH---------
T ss_pred             EEecccCeEEEEEEEecC-----CCcEEEEEEEEChhcCHH----------------------------HH---------
Confidence            599999999999988653     125789999987653211                            00         


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHH
Q 008021          371 QVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKM  447 (581)
Q Consensus       371 ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~  447 (581)
                       -+|.+|++.+.++.     +++|  .+.+.-. ....+|||||++|++|.+++.....  .......++..++.+ +..
T Consensus        54 -~~~~~E~~il~~l~-----HpnI--v~l~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~g-L~y  124 (285)
T d1u59a_          54 -EEMMREAQIMHQLD-----NPYI--VRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG-MKY  124 (285)
T ss_dssp             -HHHHHHHHHHHHCC-----CTTB--CCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHH-HHH
T ss_pred             -HHHHHHHHHHHhCC-----CCCE--eeEeeeeccCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHH-HHH
Confidence             13456776665542     3332  2222211 2345799999999999998754221  222233445444444 888


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc-HHHHHHHHHhhc
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD-GRTAAECTLRLS  526 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D-~~~~~e~ll~l~  526 (581)
                      ||..|++|||+||.|||++       .++      .++|+|||+++.+.........   .....+. .+.++|.+. -+
T Consensus       125 lH~~~iiHrDlKp~Nill~-------~~~------~~Kl~DFGla~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~-~~  187 (285)
T d1u59a_         125 LEEKNFVHRDLAARNVLLV-------NRH------YAKISDFGLSKALGADDSYYTA---RSAGKWPLKWYAPECIN-FR  187 (285)
T ss_dssp             HHHTTEECCCCSGGGEEEE-------ETT------EEEECCCTTCEECTTCSCEECC---CCSSCCCGGGCCHHHHH-HC
T ss_pred             HHhCCeecCcCchhheeec-------cCC------ceeeccchhhhccccccccccc---ccccccCccccChHHHh-CC
Confidence            9999999999999999999       677      9999999999877543211000   0000111 234555543 34


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 008021          527 KQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       527 ~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ......|.|+|+..+.++++
T Consensus       188 ~~~~ksDVwS~Gv~l~E~lt  207 (285)
T d1u59a_         188 KFSSRSDVWSYGVTMWEALS  207 (285)
T ss_dssp             EECHHHHHHHHHHHHHHHHT
T ss_pred             CCCccchhhcchHHHHHHHh
Confidence            44456688888888888775

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.9e-18  Score=169.56  Aligned_cols=197  Identities=18%  Similarity=0.200  Sum_probs=128.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||.||+|+.++        +++||||+.+.+-..                                      
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~--------~~~vAvK~l~~~~~~--------------------------------------   42 (258)
T d1k2pa_           9 LKELGTGQFGVVKYGKWRG--------QYDVAIKMIKEGSMS--------------------------------------   42 (258)
T ss_dssp             CCCCCEETTEEEEEEEETT--------TEEEEEEEEESSSSC--------------------------------------
T ss_pred             eEEEecCCCeEEEEEEECC--------CCEEEEEEECcCcCC--------------------------------------
Confidence            4789999999999999864        689999998764110                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~  444 (581)
                        +-+|.+|.+.+.++.     +++|.  +.+.  .....-++||||++|+++.+++......  ......++..++++ 
T Consensus        43 --~~~~~~Ev~~~~~l~-----HpnIv--~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~g-  112 (258)
T d1k2pa_          43 --EDEFIEEAKVMMNLS-----HEKLV--QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA-  112 (258)
T ss_dssp             --HHHHHHHHHHHHTCC-----CTTBC--CEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhcC-----CCcee--eEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHH-
Confidence              113455666555442     23221  2222  1224457999999999999986543221  12223455444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc-HHHHHHHHH
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD-GRTAAECTL  523 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D-~~~~~e~ll  523 (581)
                      +..||..|++|+|+||.|||++       .++      .++|+|||++..+.+........     ..+. .+.++|.+.
T Consensus       113 l~~LH~~~iiH~dlk~~Nill~-------~~~------~~kl~DfG~a~~~~~~~~~~~~~-----~~~t~~y~aPE~~~  174 (258)
T d1k2pa_         113 MEYLESKQFLHRDLAARNCLVN-------DQG------VVKVSDFGLSRYVLDDEYTSSVG-----SKFPVRWSPPEVLM  174 (258)
T ss_dssp             HHHHHHTTBCCSCCSGGGEEEC-------TTC------CEEECCCSSCCBCSSSSCCCCCC-----SCCCGGGCCHHHHH
T ss_pred             HHHHhhcCcccccccceeEEEc-------CCC------cEEECcchhheeccCCCceeecc-----cCCCCCcCCcHHhc
Confidence            8889999999999999999998       666      89999999998765543221100     0111 234556554


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhh-H--hhccccHHHHHHH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPS-G--VLRRVIWSILLSA  560 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~-~--~~~~~~~~~ll~~  560 (581)
                      . ..+....|.|+|+..+-++++ +  .+++....++...
T Consensus       175 ~-~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~  213 (258)
T d1k2pa_         175 Y-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH  213 (258)
T ss_dssp             H-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHH
T ss_pred             C-CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHH
Confidence            3 455567799999999999886 3  3555555555443

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.9e-17  Score=170.05  Aligned_cols=202  Identities=19%  Similarity=0.106  Sum_probs=127.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||+|++|.||+|+.+.+       |+.||||+.+........                                   
T Consensus        23 ~~~LG~G~fg~Vy~a~~~~~-------~~~vAiK~i~~~~~~~~~-----------------------------------   60 (348)
T d2gfsa1          23 LSPVGSGAYGSVCAAFDTKT-------GLRVAVKKLSRPFQSIIH-----------------------------------   60 (348)
T ss_dssp             EEECGGGTTSSEEEEEETTT-------TEEEEEEECSCTTSSHHH-----------------------------------
T ss_pred             EEEEecCCCeEEEEEEECCC-------CCEEEEEEECchhcChHH-----------------------------------
Confidence            47899999999999998875       799999997654221100                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-cccccccc----CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYP----LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA  443 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~----l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a  443 (581)
                        .-.+.+|.+.+.++.     ++++ .+-..+..    .....+++|+|+.|++|.+++....-.......++..++.+
T Consensus        61 --~~~~~~Ei~il~~l~-----h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~a  133 (348)
T d2gfsa1          61 --AKRTYRELRLLKHMK-----HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG  133 (348)
T ss_dssp             --HHHHHHHHHHHHHCC-----CTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHhcC-----CCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHH
Confidence              011334555554431     2222 22222211    12234677888899999998854322222233455555544


Q ss_pred             HHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHH
Q 008021          444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL  523 (581)
Q Consensus       444 ~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll  523 (581)
                       ++.||..|++|||+||+|||++       .+|      .++++|||++...........        ..-.+.++|.+.
T Consensus       134 -L~~LH~~giiHrDiKp~NILi~-------~~~------~~kl~dfg~a~~~~~~~~~~~--------g~~~y~apE~~~  191 (348)
T d2gfsa1         134 -LKYIHSADIIHRDLKPSNLAVN-------EDC------ELKILDFGLARHTDDEMTGYV--------ATRWYRAPEIML  191 (348)
T ss_dssp             -HHHHHHTTCCCCCCCGGGEEEC-------TTC------CEEECCC----CCTGGGSSSC--------HHHHTSCHHHHT
T ss_pred             -HHHHHhCCCcccccCCcccccc-------ccc------cccccccchhcccCccccccc--------ccccccCchhhc
Confidence             8889999999999999999999       677      899999999987765432211        122456677766


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHH
Q 008021          524 RLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSAC  561 (581)
Q Consensus       524 ~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~  561 (581)
                      .........|.|+++..+.+++.+.  +...+.......+
T Consensus       192 ~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i  231 (348)
T d2gfsa1         192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI  231 (348)
T ss_dssp             TCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            6555667789999999999999884  4444444443333

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=7.4e-18  Score=174.20  Aligned_cols=202  Identities=14%  Similarity=0.014  Sum_probs=128.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+...+-. ...                                   
T Consensus        25 ~k~LG~G~fg~Vy~a~~~~~-------~~~vAiK~i~~~~~-~~~-----------------------------------   61 (350)
T d1q5ka_          25 TKVIGNGSFGVVYQAKLCDS-------GELVAIKKVLQDKR-FKN-----------------------------------   61 (350)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEECCSS-SCC-----------------------------------
T ss_pred             eeEEeeCcCeEEEEEEECCC-------CCEEEEEEECccch-HHH-----------------------------------
Confidence            46799999999999999875       79999999765421 111                                   


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-ccccccccC-C----CCcEEEEeccCCccHHHHHHhhhc----chhhHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPL-V----HPAVLVETYEQGECVSRYVDELQG----HERLKSALAH  438 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~l-~----t~~VLVmEyi~G~~L~~~l~~~~~----~~~~~~~la~  438 (581)
                             +|.+.+.++     +++++ .+...+... .    ..-+|||||++|.....+......    .......++.
T Consensus        62 -------~Ei~il~~l-----~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~  129 (350)
T d1q5ka_          62 -------RELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY  129 (350)
T ss_dssp             -------HHHHHHHHC-----CCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             -------HHHHHHHhc-----CCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHH
Confidence                   233333222     12221 111111110 0    112699999998755544321111    1112233455


Q ss_pred             HHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHH
Q 008021          439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA  518 (581)
Q Consensus       439 ~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~  518 (581)
                      .++.+ ++.||..|++||||||+|||++       .++     ..++|+|||++..+.......      .......+.+
T Consensus       130 qil~a-L~yLH~~~IiHrDiKp~NILl~-------~~~-----~~~kl~DFG~a~~~~~~~~~~------~~~gt~~y~a  190 (350)
T d1q5ka_         130 QLFRS-LAYIHSFGICHRDIKPQNLLLD-------PDT-----AVLKLCDFGSAKQLVRGEPNV------SYICSRYYRA  190 (350)
T ss_dssp             HHHHH-HHHHHTTTEECCCCCGGGEEEC-------TTT-----CCEEECCCTTCEECCTTSCCC------SCCSCTTSCC
T ss_pred             HHHHH-HHHHHhcCCcccCCCcceEEEe-------cCC-----CceeEecccchhhccCCcccc------cccccccccC
Confidence            55544 8889999999999999999998       332     279999999998876543211      1123456777


Q ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          519 AECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       519 ~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      +|.++.-..+....|.|++++.+.+++.+.  +......+.+..+.+.
T Consensus       191 PE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~  238 (350)
T d1q5ka_         191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV  238 (350)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHH
T ss_pred             hHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHH
Confidence            888776566667789999999999999883  5555555666555544

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.4e-17  Score=166.38  Aligned_cols=207  Identities=13%  Similarity=0.050  Sum_probs=132.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||+|++|.||+|+++.+       |+.||||+.+......                           ...       
T Consensus         7 i~~LG~G~fg~V~~~~~~~~-------~~~vAvK~i~~~~~~~---------------------------~~~-------   45 (292)
T d1unla_           7 LEKIGEGTYGTVFKAKNRET-------HEIVALKRVRLDDDDE---------------------------GVP-------   45 (292)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------CCEEEEEEEESSCSST---------------------------THH-------
T ss_pred             eeEEecCcCeEEEEEEECCC-------CcEEEEEEEehhhCCh---------------------------HHH-------
Confidence            36899999999999999875       7999999976442110                           001       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc-hhhHHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALLKM  447 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-~~~~~~la~~~i~a~l~~  447 (581)
                         -.+.+|...+.++     +++++.-..-+.......++|||++.|..+..+....... ......+...++.+ ++.
T Consensus        46 ---~~~~~E~~il~~l-----~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~a-L~~  116 (292)
T d1unla_          46 ---SSALREICLLKEL-----KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG-LGF  116 (292)
T ss_dssp             ---HHHHHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHH-HHH
T ss_pred             ---HHHHHHHHHHHhc-----CcCCEEeeccccccccceeEEeeeccccccccccccccccchhHHHHHHHHHHHH-HHH
Confidence               1123444444322     1233221111222234458999999999998876543221 12223344444444 888


Q ss_pred             hhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcC
Q 008021          448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK  527 (581)
Q Consensus       448 L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~  527 (581)
                      ||..|++|||+||+|||+.       .++      +++++|||.+...+.......     ......++.+.+.+.....
T Consensus       117 lH~~~IvHrDiKP~NIli~-------~~~------~~kl~DFG~a~~~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~  178 (292)
T d1unla_         117 CHSRNVLHRDLKPQNLLIN-------RNG------ELKLANFGLARAFGIPVRCYS-----AEVVTLWYRPPDVLFGAKL  178 (292)
T ss_dssp             HHHTTEECCCCSGGGEEEC-------TTC------CEEECCCTTCEECCSCCSCCC-----SCCSCGGGCCHHHHTTCSC
T ss_pred             hhcCCEeeecccCcccccc-------cCC------ceeeeecchhhcccCCCccce-----eeccccchhhhhHhccCCC
Confidence            9999999999999999998       566      899999999987754332110     0112334555666555444


Q ss_pred             CCCCCCHHHHHHHHHHhhhHh---hccccHHHHHHHHHH
Q 008021          528 QQNCPNPKAFIEWMRLLPSGV---LRRVIWSILLSACSN  563 (581)
Q Consensus       528 ~~~~~D~~~f~~~l~~l~~~~---~~~~~~~~ll~~~~~  563 (581)
                      .+...|.|+++..+.+++.+-   +...+..+.+..+..
T Consensus       179 ~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~  217 (292)
T d1unla_         179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR  217 (292)
T ss_dssp             CCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH
T ss_pred             CCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHh
Confidence            556789999999999998773   455566666655444

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=7.1e-18  Score=170.41  Aligned_cols=204  Identities=13%  Similarity=0.035  Sum_probs=126.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+.+....                               +.    
T Consensus         7 ~~~lG~G~fg~Vy~~~~~~~-------~~~vAvK~i~~~~~~~-------------------------------~~----   44 (298)
T d1gz8a_           7 VEKIGEGTYGVVYKARNKLT-------GEVVALKKIRLDTETE-------------------------------GV----   44 (298)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------CCEEEEEEEC--------------------------------------C----
T ss_pred             ccEEecCcCeEEEEEEECCC-------CCEEEEEEEehhhcCh-------------------------------HH----
Confidence            47899999999999999875       7999999976431100                               00    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC--CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL--VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l--~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~  444 (581)
                        .-.+.+|.+.+.++     ++++  +.+.+..+  ...-++||||++|..+.........  .......++..++.+ 
T Consensus        45 --~~~~~~Ei~il~~l-----~Hp~--Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~-  114 (298)
T d1gz8a_          45 --PSTAIREISLLKEL-----NHPN--IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG-  114 (298)
T ss_dssp             --CHHHHHHHHHHTTC-----CCTT--BCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHhC-----CCCc--EEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHH-
Confidence              01233455444332     1222  23333222  3445899999988755544322111  122223344444444 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ++.||..|++|||+||+|||++       .++      .++|+|||++...+.+.....     .......+.++|.+..
T Consensus       115 L~yLH~~~IiHrDiKpeNIl~~-------~~~------~~kl~DFG~a~~~~~~~~~~~-----~~~gt~~y~apE~~~~  176 (298)
T d1gz8a_         115 LAFCHSHRVLHRDLKPQNLLIN-------TEG------AIKLADFGLARAFGVPVRTYT-----HEVVTLWYRAPEILLG  176 (298)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEEC-------TTS------CEEECSTTHHHHHCCCSBCTT-----CCBCCCTTCCHHHHTT
T ss_pred             HHHhhcCCEEccccCchheeec-------ccC------cceeccCCcceeccCCcccce-----eecccceeeehhhhcc
Confidence            8889999999999999999998       666      899999999876654321110     0112345667777766


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACS  562 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~  562 (581)
                      ........|.|+++..+.+++.+-  +...+-.+.+..+.
T Consensus       177 ~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~  216 (298)
T d1gz8a_         177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF  216 (298)
T ss_dssp             CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHH
Confidence            555566789999999999999883  44444444444443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.1e-17  Score=172.47  Aligned_cols=208  Identities=14%  Similarity=0.068  Sum_probs=126.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||+|++|+||+|+.+.+       |+.||||+.++.-.+                            +..       
T Consensus        13 ~~~LG~G~fg~Vy~~~~~~~-------~~~vAvK~i~~~~~~----------------------------~~~-------   50 (345)
T d1pmea_          13 LSYIGEGAYGMVCSAYDNVN-------KVRVAIKKISPFEHQ----------------------------TYC-------   50 (345)
T ss_dssp             EEECC---CCCEEEEEETTT-------CSEEEEEEECCTTCH----------------------------HHH-------
T ss_pred             EEEEeeccCeEEEEEEECCC-------CcEEEEEEEehhcCh----------------------------HHH-------
Confidence            37899999999999998765       799999997653111                            000       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCc-cccccccc---CCCCcEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYP---LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V-~vP~~~~~---l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~  444 (581)
                         -.+.+|...+.++.     ++++ .+...+..   .....+++|+|+.|++|.+++....-.......++..++.+ 
T Consensus        51 ---~~~~~Ei~il~~l~-----hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~a-  121 (345)
T d1pmea_          51 ---QRTLREIKILLRFR-----HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRG-  121 (345)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHH-
T ss_pred             ---HHHHHHHHHHHHcC-----CCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHH-
Confidence               12344555554432     2222 22222211   11234666777889999999865333333334455555554 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ++.||..|++||||||+|||++       .+|      .++|+|||++............  ....+....+.+.|.+..
T Consensus       122 l~yLH~~~iiHRDIKp~NILl~-------~~~------~~kl~DfG~a~~~~~~~~~~~~--~~~~~gt~~y~aPE~l~~  186 (345)
T d1pmea_         122 LKYIHSANVLHRDLKPSNLLLN-------TTC------DLKICDFGLARVADPDHDHTGF--LTEYVATRWYRAPEIMLN  186 (345)
T ss_dssp             HHHHHHTTEECCCCCGGGEEEC-------TTC------CEEECCCTTCEECCGGGCBCCT--TCCCCSCGGGCCGGGTTT
T ss_pred             HHHHHHCCCcCCCCCcceEEEC-------CCC------CEEEcccCceeeccCCCcccee--eccccccceechHHHhhc
Confidence            8889999999999999999998       667      8999999999876554321100  000011224566666544


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACS  562 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~  562 (581)
                      -..+....|.|+++..+.+++.+.  +......+......
T Consensus       187 ~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~  226 (345)
T d1pmea_         187 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL  226 (345)
T ss_dssp             BCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHh
Confidence            444555679999999999999873  43333334443333

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.9e-18  Score=178.20  Aligned_cols=190  Identities=17%  Similarity=0.122  Sum_probs=116.8

Q ss_pred             hhccCC--ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          283 IFDGFE--EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       283 iF~~fd--~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      +.++++  .+.||+|++|+||+|+.+.+       |+.||||+.+..  ..                             
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~-------~~~vAiK~i~~~--~~-----------------------------   50 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNKRT-------QEKFALKMLQDC--PK-----------------------------   50 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEETTT-------CCEEEEEEEECS--HH-----------------------------
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEECCC-------CCEEEEEEECCc--HH-----------------------------
Confidence            444554  46799999999999999875       799999997532  11                             


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccC------CCCcEEEEeccCCccHHHHHHhhhc---chh
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL------VHPAVLVETYEQGECVSRYVDELQG---HER  431 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l------~t~~VLVmEyi~G~~L~~~l~~~~~---~~~  431 (581)
                                   +.+|...+.+.    .++++  +.+.+.-+      ...-+|||||++|++|.+++.....   ...
T Consensus        51 -------------~~~E~~~~~~~----~~hpn--Iv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~  111 (335)
T d2ozaa1          51 -------------ARREVELHWRA----SQCPH--IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER  111 (335)
T ss_dssp             -------------HHHHHHHHHHH----TTSTT--BCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHH
T ss_pred             -------------HHHHHHHHHHh----cCCCC--CCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHH
Confidence                         11233332222    12333  22332221      1224799999999999999865221   122


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ....++..++.+ ++.||..|++|||+||+|||++...    ..+      .++|+|||+++.+........      ..
T Consensus       112 ~~~~i~~qi~~a-l~ylH~~~iiHRDiKp~NIll~~~~----~~~------~~Kl~DFG~a~~~~~~~~~~~------~~  174 (335)
T d2ozaa1         112 EASEIMKSIGEA-IQYLHSINIAHRDVKPENLLYTSKR----PNA------ILKLTDFGFAKETTSHNSLTT------PC  174 (335)
T ss_dssp             HHHHHHHHHHHH-HHHHHHTTEECCCCSGGGEEESCSS----TTC------CEEECCCTTCEECCCCCCCCC------CS
T ss_pred             HHHHHHHHHHHH-HHHHHHcCCcccccccccccccccc----ccc------cccccccceeeeccCCCcccc------cc
Confidence            223455555544 8889999999999999999998211    233      799999999987654332110      00


Q ss_pred             hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          512 RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      -.-.+.++|.+.. ..+....|.|+++..+.+++.+
T Consensus       175 gt~~y~aPE~~~~-~~y~~~~DiwSlGvily~lltg  209 (335)
T d2ozaa1         175 YTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCG  209 (335)
T ss_dssp             CCCSSCCCCCCCG-GGGSHHHHHHHHHHHHHHHTTS
T ss_pred             CCcccCCcHHHcC-CCCCHHHHHHhhchhHHHHhhC
Confidence            1112233333221 2233456888999888888766

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.4e-17  Score=161.84  Aligned_cols=189  Identities=15%  Similarity=0.139  Sum_probs=112.4

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|++..+  +  ..+..||||+.++...+.                            .        
T Consensus        12 ~~~iG~G~fg~Vy~a~~~~~--~--~~~~~vaik~~~~~~~~~----------------------------~--------   51 (273)
T d1mp8a_          12 GRCIGEGQFGDVHQGIYMSP--E--NPALAVAIKTCKNCTSDS----------------------------V--------   51 (273)
T ss_dssp             EEEEEECSSSEEEEEEECCC------CCEEEEEEECTTTTSHH----------------------------H--------
T ss_pred             EEEEeeCCCcEEEEEEEecC--C--ceeEEEEEEEeccccCHH----------------------------H--------
Confidence            57899999999999998653  1  124679999876542110                            0        


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l  445 (581)
                        .-.|.+|+..+.++     ++++|  .+.+.-. ...-++||||++|+++.+++.....  .......++..++++ +
T Consensus        52 --~~~~~~E~~~l~~l-----~HpnI--v~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~g-l  121 (273)
T d1mp8a_          52 --REKFLQEALTMRQF-----DHPHI--VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA-L  121 (273)
T ss_dssp             --HHHHHHHHHHHHTC-----CCTTB--CCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHH-H
T ss_pred             --HHHHHHHHHHHHhC-----CCCCE--eeEEEEEecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHH-h
Confidence              11345566665543     23332  2222222 2345899999999999998654322  112223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc-HHHHHHHHHh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD-GRTAAECTLR  524 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D-~~~~~e~ll~  524 (581)
                      ..+|..|++|||+||.||+++       .++      .++|+|||+++.++......-.     ...+- .+.++|.+. 
T Consensus       122 ~ylH~~~iiHrDlKp~NIll~-------~~~------~~Kl~DfG~a~~~~~~~~~~~~-----~~~gt~~y~apE~l~-  182 (273)
T d1mp8a_         122 AYLESKRFVHRDIAARNVLVS-------SND------CVKLGDFGLSRYMEDSTYYKAS-----KGKLPIKWMAPESIN-  182 (273)
T ss_dssp             HHHHHTTCCCSCCSGGGEEEE-------ETT------EEEECC------------------------CCGGGCCHHHHH-
T ss_pred             hhhcccCeeccccchhheeec-------CCC------cEEEccchhheeccCCcceecc-----ceecCcccchhhHhc-
Confidence            889999999999999999999       667      8999999999887654322111     11122 345555553 


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhh
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      -+.+....|.|+|+..+.+++.
T Consensus       183 ~~~~~~~~DiwSlGvil~e~lt  204 (273)
T d1mp8a_         183 FRRFTSASDVWMFGVCMWEILM  204 (273)
T ss_dssp             HCCCSHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCccccccchHHHHHHHh
Confidence            3555556799999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=8.4e-18  Score=168.04  Aligned_cols=194  Identities=14%  Similarity=0.105  Sum_probs=121.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+.+.+       |+.||||+.+.+.....              ...+..                
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~-------~~~vAvK~i~~~~~~~~--------------~~~~~~----------------   51 (273)
T d1xwsa_           9 GPLLGSGGFGSVYSGIRVSD-------NLPVAIKHVEKDRISDW--------------GELPNG----------------   51 (273)
T ss_dssp             EEEEEEETTEEEEEEEETTT-------CCEEEEEEEEGGGCCCE--------------EECTTC----------------
T ss_pred             eEEEeeCCCeEEEEEEECCC-------CCEEEEEEEehHHccch--------------hhhhHH----------------
Confidence            47899999999999999875       79999998765311000              000000                


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCC-ccHHHHHHhhhc-chhhHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQG-ECVSRYVDELQG-HERLKSALAHIGTHAL  444 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G-~~L~~~l~~~~~-~~~~~~~la~~~i~a~  444 (581)
                         ..+.+|...+.++..   .++++  .+.+.  ......++||||++| ..+.+++..... .......++..++.+ 
T Consensus        52 ---~~~~~E~~il~~l~~---~h~nI--v~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~a-  122 (273)
T d1xwsa_          52 ---TRVPMEVVLLKKVSS---GFSGV--IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA-  122 (273)
T ss_dssp             ---CEEEHHHHHHHHHCS---SSCSB--CCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHH-
T ss_pred             ---HHHHHHHHHHHHhcc---CCCCc--cEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHH-
Confidence               011234444444321   12322  22332  223445899999986 577777654322 122223344455544 


Q ss_pred             HHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHh
Q 008021          445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       445 l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~  524 (581)
                      ++.+|..|++|||+||+|||++.      +++      .++|+|||++..........+       .-.-.+.++|.+..
T Consensus       123 l~~lH~~~iiHrDiKp~NIll~~------~~~------~vkl~DFG~a~~~~~~~~~~~-------~GT~~y~aPE~~~~  183 (273)
T d1xwsa_         123 VRHCHNCGVLHRDIKDENILIDL------NRG------ELKLIDFGSGALLKDTVYTDF-------DGTRVYSPPEWIRY  183 (273)
T ss_dssp             HHHHHHTTEECSCCSGGGEEEET------TTT------EEEECCCTTCEECCSSCBCCC-------CSCGGGSCHHHHHH
T ss_pred             HHHHHHCCCccccCcccceEEec------CCC------eEEECccccceeccccccccc-------ccCCCcCCHHHHcC
Confidence            88899999999999999999981      235      899999999987655432221       11235667777755


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      -.......|.|+++..+.+++.+
T Consensus       184 ~~~~~~~~DiwSlGvilyell~g  206 (273)
T d1xwsa_         184 HRYHGRSAAVWSLGILLYDMVCG  206 (273)
T ss_dssp             SCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcccccccceeeehhHhhC
Confidence            44334456999999999999877

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.2e-17  Score=167.97  Aligned_cols=196  Identities=15%  Similarity=0.115  Sum_probs=123.9

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+++...  ....++.||||+.+++-..                                      
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~--~~~~~~~vAvK~i~~~~~~--------------------------------------   67 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLI--KSDAAMTVAVKMLKPSAHL--------------------------------------   67 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSS--STTCEEEEEEEEECTTCCH--------------------------------------
T ss_pred             eeEEeecCCeEEEEEEEeccc--cCCCCeEEEEEEECcccCH--------------------------------------
Confidence            578999999999999975310  1123689999998875221                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-------------------c
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-------------------H  429 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-------------------~  429 (581)
                      ..+..|.+|+..+.++    .++++|.--.-+.......+|||||++|+++.+++.....                   .
T Consensus        68 ~~~~~~~~E~~~~~~l----~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~  143 (311)
T d1t46a_          68 TEREALMSELKVLSYL----GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD  143 (311)
T ss_dssp             HHHHHHHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCC
T ss_pred             HHHHHHHHHHHHHHhc----cCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCC
Confidence            1122355676666554    2344443111111222346899999999999999864321                   1


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHH
Q 008021          430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA  509 (581)
Q Consensus       430 ~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~A  509 (581)
                      ......++..++.+ ++.||..|++||||||.||+++       .++      .++++|||++..+...........   
T Consensus       144 ~~~~~~~~~qi~~g-l~~LH~~~ivHrDLKp~NIl~~-------~~~------~~ki~DfG~~~~~~~~~~~~~~~~---  206 (311)
T d1t46a_         144 LEDLLSFSYQVAKG-MAFLASKNCIHRDLAARNILLT-------HGR------ITKICDFGLARDIKNDSNYVVKGN---  206 (311)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEE-------TTT------EEEECCCGGGSCTTSCTTSEECSS---
T ss_pred             HHHHHHHHHHHHHH-HHHHHhCCeeeccccccccccc-------ccC------cccccccchheeccCCCcceEeee---
Confidence            11223345555444 8889999999999999999998       666      899999999987654322110000   


Q ss_pred             HHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       510 l~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ....-.+.++|.+. -+......|.++|+..+.++++
T Consensus       207 ~~gt~~y~aPE~~~-~~~~~~~~DIwS~G~~l~ellt  242 (311)
T d1t46a_         207 ARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFS  242 (311)
T ss_dssp             SEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccChHHcCHHHhc-CCCCCCcccccchHHHHHHHHh
Confidence            00011234455543 3445556788999999998886

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.3e-17  Score=166.55  Aligned_cols=191  Identities=15%  Similarity=0.109  Sum_probs=121.2

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCe--EEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPI--VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV  361 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~--~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v  361 (581)
                      ++|+ .+.||+|+||.||+|+++.+       |.  .||||..+....+.                              
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~-------~~~~~vaiK~~~~~~~~~------------------------------   52 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKD-------GLRMDAAIKRMKEYASKD------------------------------   52 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEET-------TEEEEEEEEEEECC----------------------------------
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCC-------CeEEEEEEEEECcccChH------------------------------
Confidence            4454 68899999999999999874       44  57777654431110                              


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHHHHHhhhc-----------
Q 008021          362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG-----------  428 (581)
Q Consensus       362 ~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~~l~~~~~-----------  428 (581)
                              ..-+|.+|.+.+.++    .++++|.  +.+.-  .....++||||++|++|.+++.....           
T Consensus        53 --------~~~~~~~E~~~l~~l----~~HpnIv--~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~  118 (309)
T d1fvra_          53 --------DHRDFAGELEVLCKL----GHHPNII--NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN  118 (309)
T ss_dssp             ----------CHHHHHHHHHTTC----CCCTTBC--CEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHT
T ss_pred             --------HHHHHHHHHHHHHhc----cCCCCEe--eEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccc
Confidence                    011345666655443    1233332  22221  23445899999999999999854210           


Q ss_pred             ------chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHH
Q 008021          429 ------HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVN  502 (581)
Q Consensus       429 ------~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~  502 (581)
                            .......++..++.+ +..+|..|++|||+||.|||++       .++      .++|.|||++..........
T Consensus       119 ~~~~~l~~~~~~~~~~qia~g-l~~lH~~~iiHrDlkp~NIL~~-------~~~------~~kl~DfG~a~~~~~~~~~~  184 (309)
T d1fvra_         119 STASTLSSQQLLHFAADVARG-MDYLSQKQFIHRDLAARNILVG-------ENY------VAKIADFGLSRGQEVYVKKT  184 (309)
T ss_dssp             TBSCSSCHHHHHHHHHHHHHH-HHHHHHTTEECSCCSGGGEEEC-------GGG------CEEECCTTCEESSCEECCC-
T ss_pred             cccCCCCHHHHHHHHHHHHHH-HHhhhcCCccccccccceEEEc-------CCC------ceEEcccccccccccccccc
Confidence                  111123344444444 7789999999999999999998       677      89999999987665443222


Q ss_pred             HHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       503 l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      ..      .-...+.++|.+.. +.+....|.|+|+..+.+++.+
T Consensus       185 ~~------~gt~~y~aPE~l~~-~~~~~~sDvwSfGvil~ell~~  222 (309)
T d1fvra_         185 MG------RLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSL  222 (309)
T ss_dssp             ---------CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTT
T ss_pred             ce------ecCCcccchHHhcc-CCCCccceeehhHHHHHHHHhc
Confidence            11      11234556666544 4455566899999999998764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2e-17  Score=168.17  Aligned_cols=196  Identities=15%  Similarity=0.103  Sum_probs=120.1

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||.||+|+++..  +...+++.||||+.++....                                      
T Consensus        25 ~~~lG~G~fG~Vy~a~~~~~--~~~~~~~~VAvK~~~~~~~~--------------------------------------   64 (308)
T d1p4oa_          25 SRELGQGSFGMVYEGVAKGV--VKDEPETRVAIKTVNEAASM--------------------------------------   64 (308)
T ss_dssp             EEEEEECSSSEEEEEEEEEE--ETTEEEEEEEEEECCTTSCH--------------------------------------
T ss_pred             eeEEeeCCCeEEEEEEECCc--ccCCCCcEEEEEEECcccCh--------------------------------------
Confidence            57899999999999998631  01112479999987654211                                      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhcc-----------hhhHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-----------ERLKSALA  437 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~~-----------~~~~~~la  437 (581)
                      ..+..|.+|+..+.++     +++++.-..-+........+||||++|++|.+++......           ......++
T Consensus        65 ~~~~~~~~E~~il~~l-----~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  139 (308)
T d1p4oa_          65 RERIEFLNEASVMKEF-----NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA  139 (308)
T ss_dssp             HHHHHHHHHHHHGGGC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHc-----CCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHH
Confidence            1123455666655443     1233221111122334568999999999999988643211           01122344


Q ss_pred             HHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHH
Q 008021          438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT  517 (581)
Q Consensus       438 ~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~  517 (581)
                      ..++++ +..||..+++|||+||.|||++       .++      .++|+|||++..+..........-   ....-.+.
T Consensus       140 ~~ia~g-l~~LH~~~ivHrDlk~~NiLld-------~~~------~~Kl~DFGla~~~~~~~~~~~~~~---~~~t~~y~  202 (308)
T d1p4oa_         140 GEIADG-MAYLNANKFVHRDLAARNCMVA-------EDF------TVKIGDFGMTRDIYETDYYRKGGK---GLLPVRWM  202 (308)
T ss_dssp             HHHHHH-HHHHHHTTCBCSCCSGGGEEEC-------TTC------CEEECCTTCCCGGGGGGCEEGGGS---SEECGGGC
T ss_pred             HHHHHH-HHHHhhCCeeeceEcCCceeec-------CCc------eEEEeecccceeccCCcceeeccc---eecccccC
Confidence            444443 8889999999999999999998       666      899999999987654332110000   00011234


Q ss_pred             HHHHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          518 AAECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       518 ~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      +++.+. .+......|.++|+..+.+++++
T Consensus       203 aPe~l~-~~~~~~~~Dv~S~G~il~El~t~  231 (308)
T d1p4oa_         203 SPESLK-DGVFTTYSDVWSFGVVLWEIATL  231 (308)
T ss_dssp             CHHHHH-HCCCCHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHc-cCCCCcccccccHHHHHHHHHhC
Confidence            444443 34444556888888888888765

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.4e-17  Score=164.16  Aligned_cols=198  Identities=16%  Similarity=0.121  Sum_probs=119.5

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|+...+......++..||||+.+++..+.-                                    
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~------------------------------------   61 (299)
T d1fgka_          18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD------------------------------------   61 (299)
T ss_dssp             EEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHH------------------------------------
T ss_pred             eeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHH------------------------------------
Confidence            47899999999999998653111112346899999887643210                                    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc-----------------chh
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-----------------HER  431 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~-----------------~~~  431 (581)
                        ..++.+|...+.++.    ++++|.--.-+......-++||||++|++|.+++.....                 ...
T Consensus        62 --~~~~~~e~~~l~~~~----~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~  135 (299)
T d1fgka_          62 --LSDLISEMEMMKMIG----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK  135 (299)
T ss_dssp             --HHHHHHHHHHHHHHC----CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHH
T ss_pred             --HHHHHHHHHHHHHhc----CCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHH
Confidence              123455655555442    233332111111223446899999999999999864321                 111


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHH
Q 008021          432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA  511 (581)
Q Consensus       432 ~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~  511 (581)
                      ....++..++.+ ++.+|..|+||||+||.|||++       .+|      .++|.|||++..++.........   ...
T Consensus       136 ~~~~~~~qi~~a-l~ylH~~~ivHrDiKp~NiLl~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~---~~~  198 (299)
T d1fgka_         136 DLVSCAYQVARG-MEYLASKKCIHRDLAARNVLVT-------EDN------VMKIADFGLARDIHHIDYYKKTT---NGR  198 (299)
T ss_dssp             HHHHHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEC-------TTC------CEEECSTTCCCCGGGCCTTCCCT---TSC
T ss_pred             HHHHHHHHHHHH-HHHhhhCCEEeeeecccceeec-------CCC------CeEeccchhhccccccccccccc---cCC
Confidence            123344444444 7889999999999999999998       677      89999999998775543221100   000


Q ss_pred             hhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          512 RRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       512 ~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      ..-.+.++|.+.. +.+....|.++|+..+.+++.
T Consensus       199 ~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl~ell~  232 (299)
T d1fgka_         199 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT  232 (299)
T ss_dssp             CGGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             CChhhhhhhHhcC-CCCCchhhhHHhHHHHHHhcc
Confidence            1113455565543 555566799999999999875

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.6e-17  Score=163.76  Aligned_cols=206  Identities=20%  Similarity=0.192  Sum_probs=116.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+-||+|++|+||+|++..+ .+   .+.+||||+..++....                          ++..       
T Consensus        13 ~~~iG~G~fg~Vy~~~~~~~-~~---~~~~vAiK~l~~~~~~~--------------------------~~~~-------   55 (273)
T d1u46a_          13 LEKLGDGSFGVVRRGEWDAP-SG---KTVSVAVKCLKPDVLSQ--------------------------PEAM-------   55 (273)
T ss_dssp             EEECC----CCCEEEEEECT-TS---CEEEEEEEC----------------------------------CHHH-------
T ss_pred             EEEEecCCCeEEEEEEEECC-CC---cEEEEEEEEEChhhcCC--------------------------HHHH-------
Confidence            45799999999999998642 11   24589999876542110                          1111       


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC-CCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL-VHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l-~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l  445 (581)
                         -+|.+|++.+.++.     +++|  .+.|.-. ...-++||||++|.++.+++......  ......++..++++ +
T Consensus        56 ---~~~~~Ei~~l~~l~-----H~nI--v~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~g-l  124 (273)
T d1u46a_          56 ---DDFIREVNAMHSLD-----HRNL--IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG-M  124 (273)
T ss_dssp             ---HHHHHHHHHHHHCC-----CTTB--CCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHH-H
T ss_pred             ---HHHHHHHHHHHhCC-----CCCE--EEEEEEEeecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHH-H
Confidence               13566766665442     3332  2233211 23458999999999999876542221  12223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      +.||..|++||||||.||+++       .++      +++|+|||++..+..........  ......-.+.++|.+.. 
T Consensus       125 ~ylH~~~iiHrDikp~NIll~-------~~~------~vkl~DfGl~~~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~-  188 (273)
T d1u46a_         125 GYLESKRFIHRDLAARNLLLA-------TRD------LVKIGDFGLMRALPQNDDHYVMQ--EHRKVPFAWCAPESLKT-  188 (273)
T ss_dssp             HHHHHTTEECSCCCGGGEEEE-------ETT------EEEECCCTTCEECCC-CCEEEC-------CCGGGCCHHHHHH-
T ss_pred             HHhhhCCEeeeeecHHHhccc-------ccc------ceeeccchhhhhcccCCCcceec--CccccCcccCCHHHHhC-
Confidence            889999999999999999999       666      89999999999875542211000  00001112334554433 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh-H--hhccccHHHHH
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS-G--VLRRVIWSILL  558 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~-~--~~~~~~~~~ll  558 (581)
                      .......|.++|+..+.++++ +  .+...+..+++
T Consensus       189 ~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~  224 (273)
T d1u46a_         189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL  224 (273)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             CCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHH
Confidence            444455689999999998875 4  23344444443

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.7e-16  Score=161.59  Aligned_cols=202  Identities=16%  Similarity=0.057  Sum_probs=121.3

Q ss_pred             cCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHH
Q 008021          286 GFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF  364 (581)
Q Consensus       286 ~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef  364 (581)
                      .|+ .+.||+|++|.||+|+++.+       |+.||||+........-                           ..   
T Consensus        18 ~Y~i~~~LG~G~fg~V~~~~d~~t-------~~~vAvK~i~~~~~~~~---------------------------~~---   60 (355)
T d2b1pa1          18 RYQNLKPIGSGAQGIVCAAYDAVL-------DRNVAIKKLSRPFQNQT---------------------------HA---   60 (355)
T ss_dssp             TEEEEEECSCC--CEEEEEEETTT-------TEEEEEEEEESTTSSHH---------------------------HH---
T ss_pred             CeEEEEEeecCcCeEEEEEEECCC-------CCEEEEEEEChhhcCHH---------------------------HH---
Confidence            454 47999999999999999875       79999999765422110                           00   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--------cCCCCcEEEEeccCCccHHHHHHhhhcchhhHHHH
Q 008021          365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--------PLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL  436 (581)
Q Consensus       365 ~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--------~l~t~~VLVmEyi~G~~L~~~l~~~~~~~~~~~~l  436 (581)
                             ..+.+|...+.++.     +++|  .+.+.        +..+.-++||||+.|..+..+...  -.......+
T Consensus        61 -------~~~~~Ei~il~~l~-----hpnI--v~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~~--~~~~~i~~~  124 (355)
T d2b1pa1          61 -------KRAYRELVLMKCVN-----HKNI--ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYL  124 (355)
T ss_dssp             -------HHHHHHHHHHHHCC-----CTTB--CCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSC--CCHHHHHHH
T ss_pred             -------HHHHHHHHHHHhcC-----CCCe--eEEEEEEecccccccCceeEEEEeccchHHHHhhhcC--CCHHHHHHH
Confidence                   11234544444431     2222  11111        122345899999999877654321  111222334


Q ss_pred             HHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHH
Q 008021          437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR  516 (581)
Q Consensus       437 a~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~  516 (581)
                      +..++.+ +..||..|++|+|+||.|||+.       .++      .++++|||+....+...+..      .......+
T Consensus       125 ~~qil~g-l~~LH~~giiHrDlKP~Nil~~-------~~~------~~kl~df~~~~~~~~~~~~~------~~~~t~~y  184 (355)
T d2b1pa1         125 LYQMLCG-IKHLHSAGIIHRDLKPSNIVVK-------SDC------TLKILDFGLARTAGTSFMMT------PYVVTRYY  184 (355)
T ss_dssp             HHHHHHH-HHHHHHTTCCCSCCCGGGEEEC-------TTC------CEEECCCCC---------------------CCTT
T ss_pred             HHHHHHH-HHHhhhcccccccCCccccccc-------ccc------ceeeechhhhhccccccccc------cccccccc
Confidence            4444443 8889999999999999999999       666      89999999988776554332      22334567


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHH
Q 008021          517 TAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSAC  561 (581)
Q Consensus       517 ~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~  561 (581)
                      .++|.+.. .......|.|++++.+.+++.+.  +........+..+
T Consensus       185 ~aPE~l~~-~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i  230 (355)
T d2b1pa1         185 RAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV  230 (355)
T ss_dssp             CCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             cChhhhcC-CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHH
Confidence            78888765 34556789999999999999883  4444444444433

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.8e-16  Score=157.82  Aligned_cols=178  Identities=20%  Similarity=0.168  Sum_probs=113.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|.||+|+++         |++||||+.+.+-.                               .+      
T Consensus        12 ~~~lG~G~fg~Vy~~~~~---------~~~vAvK~i~~~~~-------------------------------~~------   45 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDYR---------GNKVAVKCIKNDAT-------------------------------AQ------   45 (262)
T ss_dssp             EEEEEECSSCEEEEEEET---------TEEEEEEECCCCC---------------------------------H------
T ss_pred             eEEEecCCCeEEEEEEEC---------CeEEEEEEECcHHH-------------------------------HH------
Confidence            477999999999999985         58999999754310                               01      


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccc---cCCCCcEEEEeccCCccHHHHHHhhhc---chhhHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY---PLVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTH  442 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~---~l~t~~VLVmEyi~G~~L~~~l~~~~~---~~~~~~~la~~~i~  442 (581)
                          +|.+|++.+.++     ++++|.  +.+.   +-...-++||||++|++|.+++.....   .......++..++.
T Consensus        46 ----~~~~E~~~l~~l-----~HpnIv--~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~  114 (262)
T d1byga_          46 ----AFLAEASVMTQL-----RHSNLV--QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE  114 (262)
T ss_dssp             ----HHHHTHHHHTTC-----CCTTBC--CEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHhC-----CCCCEe--eEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHh
Confidence                134455544433     133322  2222   111234799999999999999854221   22223345555554


Q ss_pred             HHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHH
Q 008021          443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT  522 (581)
Q Consensus       443 a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~l  522 (581)
                      + +..+|..|++|+|+||.|||++       .+|      .+++.|||++...++.....        ...-.+.++|.+
T Consensus       115 a-l~ylH~~~ivH~dlkp~Nil~~-------~~~------~~kl~dfg~s~~~~~~~~~~--------~~~~~y~aPE~l  172 (262)
T d1byga_         115 A-MEYLEGNNFVHRDLAARNVLVS-------EDN------VAKVSDFGLTKEASSTQDTG--------KLPVKWTAPEAL  172 (262)
T ss_dssp             H-HHHHHHTTCCCSCCSGGGEEEC-------TTS------CEEECCCCC--------------------CCTTTSCHHHH
T ss_pred             h-ccccccCceeccccchHhheec-------CCC------CEeecccccceecCCCCccc--------cccccCCChHHH
Confidence            4 7889999999999999999999       677      89999999998765543222        112245567766


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          523 LRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       523 l~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .. +......|.++|+..+.++++
T Consensus       173 ~~-~~~t~~sDIwSfG~il~el~t  195 (262)
T d1byga_         173 RE-KKFSTKSDVWSFGILLWEIYS  195 (262)
T ss_dssp             HH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             hC-CCCChHHHHHhHHHHHHHHHH
Confidence            54 455566799999999999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.9e-16  Score=160.07  Aligned_cols=192  Identities=17%  Similarity=0.141  Sum_probs=120.7

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||+||+|+.+.+  |+ ....+||||..++.....                                     
T Consensus        14 ~~~lG~G~fG~Vy~~~~~~~--~~-~~~~~vavK~~~~~~~~~-------------------------------------   53 (317)
T d1xkka_          14 IKVLGSGAFGTVYKGLWIPE--GE-KVKIPVAIKELREATSPK-------------------------------------   53 (317)
T ss_dssp             EEEEEECSSEEEEEEEECC-------CCEEEEEEEECC----C-------------------------------------
T ss_pred             eeEEecCCCeEEEEEEEcCC--CC-EEEEEEEEEEeccccCHH-------------------------------------
Confidence            47999999999999998764  20 012368888766542111                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-CCCCcEEEEeccCCccHHHHHHhhhcc--hhhHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHPAVLVETYEQGECVSRYVDELQGH--ERLKSALAHIGTHALL  445 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~~la~~~i~a~l  445 (581)
                       .+-+|.+|++.+.++.     +++|.  +.+.- ......++|||+.|.++.+++......  ......++..++.+ +
T Consensus        54 -~~~~~~~E~~~l~~l~-----HpnIv--~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~g-l  124 (317)
T d1xkka_          54 -ANKEILDEAYVMASVD-----NPHVC--RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG-M  124 (317)
T ss_dssp             -THHHHHHHHHHHHHCC-----CTTBC--CEEEEEESSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHH-H
T ss_pred             -HHHHHHHHHHHHHhCC-----CCCEe--eEEEEEecCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHH-H
Confidence             0112455666665442     33322  22211 234557899999999998877543221  11223344444444 8


Q ss_pred             HHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhh
Q 008021          446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL  525 (581)
Q Consensus       446 ~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l  525 (581)
                      ..||..|++|||+||.|||++       .++      .++|+|||++..+...........   ..-.-.+.++|.+.. 
T Consensus       125 ~yLH~~~iiHrDlKp~NIll~-------~~~------~~kl~DFGla~~~~~~~~~~~~~~---~~gt~~y~APE~l~~-  187 (317)
T d1xkka_         125 NYLEDRRLVHRDLAARNVLVK-------TPQ------HVKITDFGLAKLLGAEEKEYHAEG---GKVPIKWMALESILH-  187 (317)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEE-------ETT------EEEECCCSHHHHTTTTCC-----------CCTTTSCHHHHHH-
T ss_pred             HHHHHcCcccCcchhhcceeC-------CCC------CeEeeccccceecccccccccccc---cccCccccChHHHhc-
Confidence            889999999999999999999       677      899999999987765443322111   111234667777654 


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 008021          526 SKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       526 ~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      +.+....|.|+|+..+.++++
T Consensus       188 ~~~~~~sDvwS~Gvil~el~t  208 (317)
T d1xkka_         188 RIYTHQSDVWSYGVTVWELMT  208 (317)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCChhhhhhhHHHHHHHHHH
Confidence            455566799999999999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.7e-16  Score=158.47  Aligned_cols=139  Identities=15%  Similarity=0.038  Sum_probs=95.0

Q ss_pred             CcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCe
Q 008021          406 PAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH  483 (581)
Q Consensus       406 ~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~  483 (581)
                      .-+++|||++|..+.........  .......++..++.+ ++.||.+|++|||+||.|||++       .+|      .
T Consensus        89 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a-L~yLH~~~ivHrDiKp~NILi~-------~~~------~  154 (305)
T d1blxa_          89 KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG-LDFLHSHRVVHRDLKPQNILVT-------SSG------Q  154 (305)
T ss_dssp             EEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHH-HHHHHHTTCCCCCCCGGGEEEC-------TTC------C
T ss_pred             eEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHH-HHHHHhCCEEecCCCccEEEEc-------CCC------C
Confidence            34799999999877654332111  111223344444444 7889999999999999999998       667      8


Q ss_pred             EEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHH
Q 008021          484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSAC  561 (581)
Q Consensus       484 lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~  561 (581)
                      ++++|||++...........      ..-.-.+.++|.+.. ..+....|.|+++..+.+++.+.  +......+.+..+
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~------~~gT~~Y~APE~~~~-~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i  227 (305)
T d1blxa_         155 IKLADFGLARIYSFQMALTS------VVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI  227 (305)
T ss_dssp             EEECSCCSCCCCCGGGGGCC------CCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             eeecchhhhhhhcccccCCC------cccChhhcCcchhcC-CCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            99999999887655432110      011235677887755 44556789999999999999884  5555556666665


Q ss_pred             HHHH
Q 008021          562 SNYL  565 (581)
Q Consensus       562 ~~~l  565 (581)
                      .+.+
T Consensus       228 ~~~~  231 (305)
T d1blxa_         228 LDVI  231 (305)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            5543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.6e-16  Score=161.12  Aligned_cols=213  Identities=14%  Similarity=0.040  Sum_probs=127.0

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      -+.||+|++|+||+|+.+.+       |+.||||+.+..-...                      ..             
T Consensus        15 ~~~LG~G~fg~Vy~a~~~~~-------~~~vAvK~i~~~~~~~----------------------~~-------------   52 (318)
T d3blha1          15 LAKIGQGTFGEVFKARHRKT-------GQKVALKKVLMENEKE----------------------GF-------------   52 (318)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------CCEEEEEEC----CTT----------------------SS-------------
T ss_pred             EEEEecCcCeEEEEEEECCC-------CCEEEEEEEehhhcch----------------------HH-------------
Confidence            47899999999999999865       7999999864321100                      00             


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCccccccccc-------CCCCcEEEEeccCCccHHHHHHhhhc-chhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-------LVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~-------l~t~~VLVmEyi~G~~L~~~l~~~~~-~~~~~~~la~~~  440 (581)
                        ..++.+|...+.++.    ...-+.+...+..       ....-++||||+++..+..+...... .......++..+
T Consensus        53 --~~~~~~E~~il~~l~----h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  126 (318)
T d3blha1          53 --PITALREIKILQLLK----HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML  126 (318)
T ss_dssp             --CHHHHHHHHHHHHCC----CTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHhc----CCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHH
Confidence              011234444444331    1111111111111       11234699999998877654322111 112223445445


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +.+ ++.+|..|++||||||.|||++       .++      .+++.|||++..++.......... ....-.-++.++|
T Consensus       127 l~~-l~~lH~~~ivHrDlKp~NILl~-------~~~------~~kl~dfg~~~~~~~~~~~~~~~~-~~~~gT~~Y~aPE  191 (318)
T d3blha1         127 LNG-LYYIHRNKILHRDMKAANVLIT-------RDG------VLKLADFGLARAFSLAKNSQPNRY-TNRVVTLWYRPPE  191 (318)
T ss_dssp             HHH-HHHHHHTTEECCCCCGGGEEEC-------TTS------CEEECCCTTCEECCC-----CCCC-CSCCSCGGGCCHH
T ss_pred             HHH-HHHhccCCEEecCcCchheeec-------CCC------cEEeeecceeeecccccccccccc-cceecCHHHhhHH
Confidence            544 8889999999999999999998       677      899999999987765432211100 0011223568888


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHhhhHh--hccccHHHHHHHHHHH
Q 008021          521 CTLRLSKQQNCPNPKAFIEWMRLLPSGV--LRRVIWSILLSACSNY  564 (581)
Q Consensus       521 ~ll~l~~~~~~~D~~~f~~~l~~l~~~~--~~~~~~~~ll~~~~~~  564 (581)
                      .+.....++...|.|+++..+.+++.+.  ++...-...+..+.+.
T Consensus       192 ~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~  237 (318)
T d3blha1         192 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL  237 (318)
T ss_dssp             HHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             HHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHh
Confidence            8776555666789999999999999883  4444444444444443

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.1e-16  Score=161.87  Aligned_cols=200  Identities=15%  Similarity=0.054  Sum_probs=124.2

Q ss_pred             ccCC-ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHH
Q 008021          285 DGFE-EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ  363 (581)
Q Consensus       285 ~~fd-~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~e  363 (581)
                      ++|+ .+.||+|++|.||+|+....    ...|+.||||+..+.-..                   .  +.-..      
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~----~~~g~~vAvK~i~~~~~~-------------------~--~~~~~------   72 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISG----HDTGKLYAMKVLKKATIV-------------------Q--KAKTT------   72 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSS----TTTTCEEEEEEESEEEEE-------------------E--EESSG------
T ss_pred             hceEEEEEEecCCCeEEEEEEECcc----CCCCcEEEEEEEehHHhc-------------------c--chHHH------
Confidence            4455 58999999999999987431    112699999987643100                   0  00000      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccc--cCCCCcEEEEeccCCccHHHHHHhhhcch-hhHHHHHHHH
Q 008021          364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY--PLVHPAVLVETYEQGECVSRYVDELQGHE-RLKSALAHIG  440 (581)
Q Consensus       364 f~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~--~l~t~~VLVmEyi~G~~L~~~l~~~~~~~-~~~~~la~~~  440 (581)
                              -.+.+|.+.+.++.+    .++|  .+.+.  +....-+++|||++|.+|.+++....... .....+...+
T Consensus        73 --------~~~~~E~~il~~l~h----~pnI--v~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi  138 (322)
T d1vzoa_          73 --------EHTRTERQVLEHIRQ----SPFL--VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEI  138 (322)
T ss_dssp             --------GGCCCHHHHHHHHHT----CTTB--CCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHhccC----CCeE--EEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHH
Confidence                    012346666666543    1222  22222  22334578999999999999886543221 2222334444


Q ss_pred             HHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHHH
Q 008021          441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE  520 (581)
Q Consensus       441 i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~e  520 (581)
                      +. .++.+|..|++|+|+||.|||++       .+|      .++|+|||++..+.........    .....-.+.+++
T Consensus       139 ~~-al~~lH~~~ivHrDiKp~Nill~-------~~~------~vkL~DFG~a~~~~~~~~~~~~----~~~g~~~~~~pe  200 (322)
T d1vzoa_         139 VL-ALEHLHKLGIIYRDIKLENILLD-------SNG------HVVLTDFGLSKEFVADETERAY----DFCGTIEYMAPD  200 (322)
T ss_dssp             HH-HHHHHHHTTCCCCCCCGGGEEEC-------TTS------CEEESCSSEEEECCGGGGGGGC----GGGSCCTTCCHH
T ss_pred             HH-HHHHhhcCCEEeccCCccceeec-------CCC------CEEEeeccchhhhccccccccc----ccccccccchhH
Confidence            44 38889999999999999999999       677      8999999999877654322111    011122344555


Q ss_pred             HHHhhc-CCCCCCCHHHHHHHHHHhhhH
Q 008021          521 CTLRLS-KQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       521 ~ll~l~-~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      .+..-. ......|.|++++.+.+++.+
T Consensus       201 ~~~~~~~~~~~ksDIWSlG~iLyelltG  228 (322)
T d1vzoa_         201 IVRGGDSGHDKAVDWWSLGVLMYELLTG  228 (322)
T ss_dssp             HHTTCC---CTHHHHHHHHHHHHHHHHS
T ss_pred             HhhcCCcCCCchhhhHHHHHHHHHHHhC
Confidence            554322 233456999999999999877

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.61  E-value=1.1e-15  Score=154.06  Aligned_cols=196  Identities=14%  Similarity=0.120  Sum_probs=112.8

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+...+       |+.||||+.......                   +                  
T Consensus        10 ~~~iG~G~fG~Vy~a~~~~~-------~~~vAvK~~~~~~~~-------------------~------------------   45 (293)
T d1csna_          10 GRRIGEGSFGVIFEGTNLLN-------NQQVAIKFEPRRSDA-------------------P------------------   45 (293)
T ss_dssp             EEEEEECSSCEEEEEEETTT-------TEEEEEEEEECCTTS-------------------C------------------
T ss_pred             EEEEecCCCeEEEEEEECCC-------CCEEEEEEEccccCc-------------------H------------------
Confidence            47899999999999999865       799999986543110                   0                  


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                          .+++|.+.+..+.    ..+++..-..+.......++||||+ |.+|.+++.....  .......++..++.+ ++
T Consensus        46 ----~~~~e~~~~~~l~----~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~-l~  115 (293)
T d1csna_          46 ----QLRDEYRTYKLLA----GCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLAR-VQ  115 (293)
T ss_dssp             ----CHHHHHHHHHHTT----TCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHH-HH
T ss_pred             ----HHHHHHHHHHHhc----CCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHH-HH
Confidence                1123333333322    2222221112233345668999998 6788888754322  112223344444443 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHH--HHHHHhhcHHHHHHHHHh
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF--FKAVARRDGRTAAECTLR  524 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l--~~Al~~~D~~~~~e~ll~  524 (581)
                      .+|..|++|||+||+|||++.....  .++      .++|+|||+++.+.+.........  ...+.-.-.+.++|.+..
T Consensus       116 ~lH~~giiHrDiKp~Nili~~~~~~--~~~------~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~  187 (293)
T d1csna_         116 SIHEKSLVYRDIKPDNFLIGRPNSK--NAN------MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG  187 (293)
T ss_dssp             HHHTTTEECCCCCGGGEEECCSSST--TTT------CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             HHHHCCceeccCCccceeecCcccc--cCC------ceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcC
Confidence            9999999999999999999732111  234      899999999986543211000000  000000123445555543


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       .......|.++|+..+.+++++
T Consensus       188 -~~~~~~~DiwSlG~~l~elltg  209 (293)
T d1csna_         188 -REQSRRDDLEALGHVFMYFLRG  209 (293)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             -CCCChHHHHHHhhHHHHHHHhC
Confidence             2233345777777777777654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.6e-16  Score=160.37  Aligned_cols=201  Identities=15%  Similarity=0.123  Sum_probs=118.3

Q ss_pred             hhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhH
Q 008021          280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE  359 (581)
Q Consensus       280 ~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e  359 (581)
                      .+.+...|+ +.||+|+||.||+|++..+ .|   ....||||+.+.....                            .
T Consensus        24 ~~~~~~~~~-~~iG~G~fg~Vyk~~~~~~-~~---~~~~vAvK~~~~~~~~----------------------------~   70 (311)
T d1r0pa_          24 PSSLIVHFN-EVIGRGHFGCVYHGTLLDN-DG---KKIHCAVKSLNRITDI----------------------------G   70 (311)
T ss_dssp             GGGEEEEEE-EEEEEETTEEEEEEEECC--------CEEEEEEEECCCCCH----------------------------H
T ss_pred             hHHceeccc-eEEeecCCeEEEEEEEECC-CC---EEEEEEEEEECcccCH----------------------------H
Confidence            344444454 6799999999999998753 11   1346899986543110                            0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc---CCCCcEEEEeccCCccHHHHHHhhhcc--hhhHH
Q 008021          360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP---LVHPAVLVETYEQGECVSRYVDELQGH--ERLKS  434 (581)
Q Consensus       360 ~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~---l~t~~VLVmEyi~G~~L~~~l~~~~~~--~~~~~  434 (581)
                      .          .-+|.+|++.+.++.     ++++.  +.+.-   .....++||||++|.++.+++......  .....
T Consensus        71 ~----------~~~~~~E~~~l~~l~-----HpnIv--~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~  133 (311)
T d1r0pa_          71 E----------VSQFLTEGIIMKDFS-----HPNVL--SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI  133 (311)
T ss_dssp             H----------HHHHHHHHHHHHTCC-----CTTBC--CCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHH
T ss_pred             H----------HHHHHHHHHHHHhCC-----CCCEe--EEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHH
Confidence            0          123556766665442     23322  22211   123457999999999999987643222  12223


Q ss_pred             HHHHHHHHHHHHHhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhc
Q 008021          435 ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD  514 (581)
Q Consensus       435 ~la~~~i~a~l~~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D  514 (581)
                      .++..++.+ +..+|..|++||||||.|||++       .++      .++|.|||++..+........... ......-
T Consensus       134 ~i~~qia~g-L~~lH~~~iiHrDLK~~NILl~-------~~~------~~kL~DFG~~~~~~~~~~~~~~~~-~~~~gt~  198 (311)
T d1r0pa_         134 GFGLQVAKG-MKFLASKKFVHRDLAARNCMLD-------EKF------TVKVADFGLARDMYDKEFDSVHNK-TGAKLPV  198 (311)
T ss_dssp             HHHHHHHHH-HHHHHHTTCCCSCCSGGGEEEC-------TTC------CEEECSSGGGCCTTTTTCCCTTCT-TCSSCCG
T ss_pred             HHHHHHHHh-hhhhcccCcccCCccHHhEeEC-------CCC------CEEEecccchhhccccccccceec-ccccccc
Confidence            455555555 6779999999999999999998       666      899999999987654432110000 0000011


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHhhh
Q 008021          515 GRTAAECTLRLSKQQNCPNPKAFIEWMRLLPS  546 (581)
Q Consensus       515 ~~~~~e~ll~l~~~~~~~D~~~f~~~l~~l~~  546 (581)
                      .+.++|.+.. +......|.|+|+..+-+++.
T Consensus       199 ~y~aPE~~~~-~~~~~ksDI~SfGivl~El~t  229 (311)
T d1r0pa_         199 KWMALESLQT-QKFTTKSDVWSFGVLLWELMT  229 (311)
T ss_dssp             GGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccChHHHhc-CCCCChhHhhhhHHHHHHHHH
Confidence            2334444432 333344577777777777665

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.61  E-value=1.2e-15  Score=153.47  Aligned_cols=194  Identities=14%  Similarity=0.095  Sum_probs=110.3

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|+||.||+|+.+.+       |+.||||+........                                     
T Consensus        12 ~~~iG~G~fG~Vy~a~~~~~-------~~~vAvK~~~~~~~~~-------------------------------------   47 (299)
T d1ckia_          12 GRKIGSGSFGDIYLGTDIAA-------GEEVAIKLECVKTKHP-------------------------------------   47 (299)
T ss_dssp             EEEEEECSSSEEEEEEETTT-------TEEEEEEEEESCTTSC-------------------------------------
T ss_pred             eEEEeeCCCcEEEEEEECCC-------CCEEEEEEEchhccCH-------------------------------------
Confidence            47899999999999999765       7999999876541100                                     


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHHHHHHhhhc--chhhHHHHHHHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLK  446 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~~~l~~~~~--~~~~~~~la~~~i~a~l~  446 (581)
                          .+..|++.+.++    ...+.+..-..+.......++||||++|.. .+.......  .......++..++.+ ++
T Consensus        48 ----~~~~E~~i~~~l----~~~~~i~~~~~~~~~~~~~~ivme~~~~~l-~~~~~~~~~~~~~~~~~~~~~qi~~~-l~  117 (299)
T d1ckia_          48 ----QLHIESKIYKMM----QGGVGIPTIRWCGAEGDYNVMVMELLGPSL-EDLFNFCSRKFSLKTVLLLADQMISR-IE  117 (299)
T ss_dssp             ----CHHHHHHHHHHS----TTSTTCCCEEEEEEETTEEEEEEECCCCBH-HHHHHHTTTCCCHHHHHHHHHHHHHH-HH
T ss_pred             ----HHHHHHHHHHHc----cCCCcccEEEEEEecCCEEEEEEEEcCCch-hhhhhhccCCCcHHHHHHHHHHHHHH-HH
Confidence                012344333322    222222222222233345688999996654 444332221  112223344444444 88


Q ss_pred             HhhhCCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHH--HHHHHHhhcHHHHHHHHHh
Q 008021          447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE--FFKAVARRDGRTAAECTLR  524 (581)
Q Consensus       447 ~L~~~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~--l~~Al~~~D~~~~~e~ll~  524 (581)
                      .||..|++|||+||+|||+...+    .+.      .++++|||++..+.+........  --..+.-.-.+.+.|.+..
T Consensus       118 ~lH~~~iiHrDiKp~NIl~~~~~----~~~------~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  187 (299)
T d1ckia_         118 YIHSKNFIHRDVKPDNFLMGLGK----KGN------LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  187 (299)
T ss_dssp             HHHHTTEECSCCCGGGEEECCGG----GTT------CEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT
T ss_pred             HHHHCCeeeccCCHhhccccccC----CCc------eeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhC
Confidence            99999999999999999997321    122      79999999998764321100000  0000001123344554432


Q ss_pred             hcCCCCCCCHHHHHHHHHHhhhH
Q 008021          525 LSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       525 l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                       ..+....|.|+|+..+.+++.+
T Consensus       188 -~~~~~~~DiwSlG~~l~el~tg  209 (299)
T d1ckia_         188 -IEQSRRDDLESLGYVLMYFNLG  209 (299)
T ss_dssp             -BCCCHHHHHHHHHHHHHHHHHS
T ss_pred             -CCCCChhhEEecCHHHHHHHhC
Confidence             2233455777887777777765

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.2e-14  Score=147.24  Aligned_cols=76  Identities=21%  Similarity=0.278  Sum_probs=56.4

Q ss_pred             cEEEEeccCCccHHHHHHhhhcchhhHHHHHHHHHHHHHHHhhh--------CCeEecCCCCCCEEEeeccccccccccc
Q 008021          407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLV--------DNFIHADMHPGNILVRVAQKKSSQKRLF  478 (581)
Q Consensus       407 ~VLVmEyi~G~~L~~~l~~~~~~~~~~~~la~~~i~a~l~~L~~--------~G~~H~DlHPGNILV~~~~~~~~~~g~~  478 (581)
                      -++||||+++++|.+++............++...+.. +..+|.        .|++|+|+||+||||+       .+|  
T Consensus        76 ~~lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~g-l~~lH~~~~~~~~~~~IvHrDlKp~NILl~-------~~~--  145 (303)
T d1vjya_          76 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG-LAHLHMEIVGTQGKPAIAHRDLKSKNILVK-------KNG--  145 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHH-HHHHHCCBCSTTCBCEEECSCCCGGGEEEC-------TTS--
T ss_pred             EEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHH-HHHHHHhhhhhccCCCeeccccCccceEEc-------CCC--
Confidence            4799999999999999976432222223344433333 555664        6999999999999998       677  


Q ss_pred             CCCCeEEEEecccccccC
Q 008021          479 RSKPHVIFLDVGMTAELS  496 (581)
Q Consensus       479 ~~~~~lvLiDFGl~~~L~  496 (581)
                          .++|+|||++..+.
T Consensus       146 ----~~Kl~DFGl~~~~~  159 (303)
T d1vjya_         146 ----TCCIADLGLAVRHD  159 (303)
T ss_dssp             ----CEEECCCTTCEEEE
T ss_pred             ----CeEEEecCcccccc
Confidence                99999999887653

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=5.3e-15  Score=151.85  Aligned_cols=199  Identities=12%  Similarity=0.005  Sum_probs=113.2

Q ss_pred             ceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHHHHH
Q 008021          289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM  368 (581)
Q Consensus       289 ~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~~~l  368 (581)
                      .+.||+|++|+||+|+.+.+       |+.||||+.+.+-.                                  ..+..
T Consensus        18 ~~~LG~G~fg~Vy~~~~~~~-------g~~vAvKvi~~~~~----------------------------------~~~~~   56 (362)
T d1q8ya_          18 VRKLGWGHFSTVWLAKDMVN-------NTHVAMKIVRGDKV----------------------------------YTEAA   56 (362)
T ss_dssp             EEEEEECSSEEEEEEEETTT-------TEEEEEEEECSCHH----------------------------------HHHHH
T ss_pred             EEEEeeCCCeEEEEEEECCC-------CCEEEEEEEecccc----------------------------------chHHH
Confidence            58999999999999999875       79999999875410                                  01112


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCcccccccccC----CCCcEEEEeccCCccHHHHHHhhhc----chhhHHHHHHHH
Q 008021          369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL----VHPAVLVETYEQGECVSRYVDELQG----HERLKSALAHIG  440 (581)
Q Consensus       369 ~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l----~t~~VLVmEyi~G~~L~~~l~~~~~----~~~~~~~la~~~  440 (581)
                      .+|+++.++..+...........++  +.+.+...    ....+++|+++.+............    ....-..+...+
T Consensus        57 ~~Ei~~l~~l~~~~~~~~~~~~~~~--iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qi  134 (362)
T d1q8ya_          57 EDEIKLLQRVNDADNTKEDSMGANH--ILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL  134 (362)
T ss_dssp             HHHHHHHHHHHHTCCSHHHHHHHTT--BCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcchhhhhhhhcCcCc--eEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHH
Confidence            2333333333221110000011111  22222111    1223566666655443322211111    111112334444


Q ss_pred             HHHHHHHhhh-CCeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHhhHHHHHHHHHHHHhhcHHHHH
Q 008021          441 THALLKMLLV-DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA  519 (581)
Q Consensus       441 i~a~l~~L~~-~G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~~r~~l~~l~~Al~~~D~~~~~  519 (581)
                      +.+ +..+|. .|++|||+||+|||+..       +|.......++++|||.+.........        .+....+.++
T Consensus       135 l~a-l~~lh~~~~IvHrDlKp~NIll~~-------~~~~~~~~~~kl~dfg~s~~~~~~~~~--------~~gt~~y~aP  198 (362)
T d1q8ya_         135 LLG-LDYMHRRCGIIHTDIKPENVLMEI-------VDSPENLIQIKIADLGNACWYDEHYTN--------SIQTREYRSP  198 (362)
T ss_dssp             HHH-HHHHHHTTCEECSCCSGGGEEEEE-------EETTTTEEEEEECCCTTCEETTBCCCS--------CCSCGGGCCH
T ss_pred             HHH-HHHHhhhcCcccccCChhHeeeec-------cCcccccceeeEeeccccccccccccc--------ccccccccCh
Confidence            443 677886 99999999999999983       221111226999999998876543311        1233456778


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhhhH
Q 008021          520 ECTLRLSKQQNCPNPKAFIEWMRLLPSG  547 (581)
Q Consensus       520 e~ll~l~~~~~~~D~~~f~~~l~~l~~~  547 (581)
                      |.+.. ..+....|.|+++..+.+++.+
T Consensus       199 E~~~~-~~~~~~~DiwSlG~il~el~~g  225 (362)
T d1q8ya_         199 EVLLG-APWGCGADIWSTACLIFELITG  225 (362)
T ss_dssp             HHHHT-CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             hhccc-cCCCccccccchHHHHHHHHHC
Confidence            87664 3445677999999999999876

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.84  E-value=1.2e-08  Score=97.89  Aligned_cols=85  Identities=24%  Similarity=0.137  Sum_probs=55.4

Q ss_pred             hhhccCCceeecccc-eeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHH
Q 008021          282 EIFDGFEEAPVASGS-IAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES  360 (581)
Q Consensus       282 eiF~~fd~~PIgsGS-igQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~  360 (581)
                      +.....+-+|++.|. -++||+.+...        |..++||+..|+-...+.                           
T Consensus         8 ~~l~g~~~~~~~~G~s~~~v~r~~~~~--------~~~~vlK~~~~~~~~~l~---------------------------   52 (255)
T d1nd4a_           8 ERLFGYDWAQQTIGCSDAAVFRLSAQG--------RPVLFVKTDLSGALNELQ---------------------------   52 (255)
T ss_dssp             TTTTTCEEEECSCTTSSCEEEEEECTT--------SCCEEEEEECSCTTSCHH---------------------------
T ss_pred             HhccCCceEEcCCcccCCeEEEEEeCC--------CCEEEEEeCCccCHhHHH---------------------------
Confidence            333445557887765 58999998753        578999998887433332                           


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc--CCCCcEEEEeccCCccHHH
Q 008021          361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP--LVHPAVLVETYEQGECVSR  421 (581)
Q Consensus       361 v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~--l~t~~VLVmEyi~G~~L~~  421 (581)
                                     .|++.++.+..     .++.+|+++..  -....+++|||++|.++.+
T Consensus        53 ---------------~E~~~l~~L~~-----~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~   95 (255)
T d1nd4a_          53 ---------------DEAARLSWLAT-----TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS   95 (255)
T ss_dssp             ---------------HHHHHHHHHHT-----TTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred             ---------------HHHHHHHHHHh-----cCCCCCceeeecccccceEEEEEeeecccccc
Confidence                           34444433321     35678888753  2345689999999988753

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.30  E-value=2e-06  Score=88.75  Aligned_cols=91  Identities=16%  Similarity=0.068  Sum_probs=55.0

Q ss_pred             cCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHHhcccccccccChhHHHHHHH
Q 008021          286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA  365 (581)
Q Consensus       286 ~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~~~~~p~l~~l~l~e~v~ef~  365 (581)
                      .++-++||-|.+-.||+.+..+   |    |+.|+||.-.|.++..              .+..|    +.++.      
T Consensus        28 ~l~~~eig~G~~N~vfrV~~~~---~----~~svivKqa~p~~r~~--------------g~~~~----~~~~R------   76 (392)
T d2pula1          28 TLTCQEIGDGNLNYVFHIYDQE---H----DRALIIKQAVPYAKVV--------------GESWP----LTIDR------   76 (392)
T ss_dssp             CCEEEECCSSSSEEEEEEEC-----------CEEEEEEECCGGGC----------------CCCC----CCTTH------
T ss_pred             CeeEEEeCCCceEeEEEEEeCC---C----CeEEEEecCCchhccc--------------CCCCC----CCHHH------
Confidence            3556789999999999998765   2    6899999877754311              00011    11111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccH
Q 008021          366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECV  419 (581)
Q Consensus       366 ~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L  419 (581)
                              ...|++.+..+..    .....+|++|..-....++||||++|.++
T Consensus        77 --------~~~E~~~L~~~~~----~~p~~vP~v~~~d~~~~~lvmE~L~~~~~  118 (392)
T d2pula1          77 --------ARIESSALIRQGE----HVPHLVPRVFYSDTEMAVTVMEDLSHLKI  118 (392)
T ss_dssp             --------HHHHHHHHHHHHT----TCGGGSCCEEEEETTTTEEEECCCTTSEE
T ss_pred             --------HHHHHHHHHHhhh----hCCCCcceEEEEcCCCCEEEEeccCCccc
Confidence                    1235444443332    23456888886656678999999998764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.30  E-value=6.9e-06  Score=78.45  Aligned_cols=34  Identities=29%  Similarity=0.479  Sum_probs=27.4

Q ss_pred             CeEecCCCCCCEEEeecccccccccccCCCCeEEEEecccccccCHh
Q 008021          452 NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT  498 (581)
Q Consensus       452 G~~H~DlHPGNILV~~~~~~~~~~g~~~~~~~lvLiDFGl~~~L~~~  498 (581)
                      .++|+|+||+|||++       +++      .+.||||+.+..=++.
T Consensus       184 ~l~HgD~~~~Nil~~-------~~~------~~~lIDwe~a~~g~~~  217 (263)
T d1j7la_         184 VFSHGDLGDSNIFVK-------DGK------VSGFIDLGRSGRADKW  217 (263)
T ss_dssp             EEECSCCCTTSEEEE-------TTE------EEEECCCTTCEEEEHH
T ss_pred             EEEEeeccCcceeec-------CCc------eEEEeechhcccCCHH
Confidence            489999999999998       444      4569999998865543

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=98.28  E-value=8.2e-07  Score=89.21  Aligned_cols=52  Identities=13%  Similarity=-0.009  Sum_probs=32.4

Q ss_pred             CCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCc
Q 008021          262 EHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV  328 (581)
Q Consensus       262 p~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v  328 (581)
                      ..+++.+...++ ++|-..+.-     -.|++ +.--+||+.++.+        |+.|++|+.+|+.
T Consensus         7 ~L~pd~i~~al~-~~g~~~~~~-----~~~L~-s~EN~vy~v~~~d--------g~~~VlK~~rp~~   58 (325)
T d1zyla1           7 TLHPDTIMDALF-EHGIRVDSG-----LTPLN-SYENRVYQFQDED--------RRRFVVKFYRPER   58 (325)
T ss_dssp             CCCHHHHHHHHH-HTTCCCCSC-----CEEEC-CSSSEEEEECCTT--------CCCEEEEEECTTT
T ss_pred             ccCHHHHHHHHH-HcCCCCCcC-----ccccc-cccceeEEEEcCC--------CCEEEEEEeCCCC
Confidence            345555655554 345433211     23443 3346899999864        6899999999983

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.46  E-value=0.00063  Score=66.58  Aligned_cols=51  Identities=4%  Similarity=-0.042  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHHHHhCCChhhhhccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCC
Q 008021          262 EHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG  327 (581)
Q Consensus       262 p~~~~~~~~~le~elG~~~~eiF~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~  327 (581)
                      +.+.++++.++.. +|-  +++   .+-++|..|..-+.|+-+..+         ...++|+.+++
T Consensus         2 ~ls~~el~~~l~~-Y~l--g~~---~~~~~i~~G~~N~ny~v~t~~---------g~yVLri~~~~   52 (316)
T d2ppqa1           2 DITEDELRNFLTQ-YDV--GSL---TSYKGIAEGVENSNFLLHTTK---------DPLILTLYEKR   52 (316)
T ss_dssp             CCCHHHHHHHHTT-BCC--CCE---EEEEEECC---EEEEEEEESS---------CCEEEEEECC-
T ss_pred             CCCHHHHHHHHHh-CCC--CCc---eEeecCCCCcccCeEEEEECC---------CcEEEEEcCCC
Confidence            3456677777654 542  221   124789999999999988743         35899997765

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.43  E-value=0.00031  Score=71.66  Aligned_cols=105  Identities=15%  Similarity=0.152  Sum_probs=65.3

Q ss_pred             HHHHHHHHHhCCChhhh-hccCCceeecccceeEEEEEEeccCCCCCCCCCeEEEEEEecCCchhhHHHHHHHHHHHHHH
Q 008021          267 YTKKTIERAFGRRLSEI-FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKI  345 (581)
Q Consensus       267 ~~~~~le~elG~~~~ei-F~~fd~~PIgsGSigQVyrA~l~~~~~G~~~~g~~VAVKV~~P~v~~~i~~Dl~il~~la~~  345 (581)
                      .+++++.+-++..|..+ .++++-++|+.|-.=++|+.+...........++.|++++-- +...               
T Consensus        24 ~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~---------------   87 (395)
T d1nw1a_          24 RAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET---------------   87 (395)
T ss_dssp             HHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC---------------
T ss_pred             HHHHHHHHhCcccccCCCccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch---------------
Confidence            35556666788777553 245667899999999999998864211112235778888742 2111               


Q ss_pred             hcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccCCCCcEEEEeccCCccHH
Q 008021          346 SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS  420 (581)
Q Consensus       346 ~~~~p~l~~l~l~e~v~ef~~~l~~ElDf~~Ea~nl~rf~~~f~~~~~V~vP~~~~~l~t~~VLVmEyi~G~~L~  420 (581)
                                               .+|-.+|..++..+.+.     ++ .|++|.-  .+..+||||++|.++.
T Consensus        88 -------------------------~idr~~E~~i~~~ls~~-----gl-~Pkll~~--~~~g~I~efi~g~~l~  129 (395)
T d1nw1a_          88 -------------------------ESHLVAESVIFTLLSER-----HL-GPKLYGI--FSGGRLEEYIPSRPLS  129 (395)
T ss_dssp             -------------------------HHHHHHHHHHHHHHHHT-----TS-SSCEEEE--ETTEEEECCCCEEECC
T ss_pred             -------------------------hhHHHHHHHHHHHHHhC-----CC-CCeEEEE--cCCceEEEEeccccCC
Confidence                                     12223465555554432     33 5787753  3568999999998765