Citrus Sinensis ID: 008066

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------58
MEFFNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC
cccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEECcccccccCEEEEEcccccccEEEEECccEEEEEEEEcccccEEEEEcccccccccccccccccccccccccccEEEEEEEccccccEEEcccccccccccEEEEEEccccccccccccccccEEEEEcccccccHHHHHHHHHHccccccccccEECcccccccccccccccCEEEECcccEEEEEEEEccccccEEEEEcccCEEEEEEcccccccEEEEEEEEccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEEccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccEEEEEcccccccccccccccccccccEEEEEEEEEEECccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEEEcccccccccccccccccccEEEECcccccccccccccccccccccccEEEEccccEEEEEEEccccccHHHHHcHHHHHHcccEEEEEEEccccccccccccccccccc
***FNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC****GLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTE****EA*PPDYPVC
xxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEFFNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Laccase-3 Lignin degradation and detoxification of lignin-derived products.confidentQ941X2
Laccase-5 Lignin degradation and detoxification of lignin-derived products.confidentQ9SIY8
Laccase-12 Lignin degradation and detoxification of lignin-derived products.probableQ9FLB5

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.10.-.-Acting on diphenols and related substances as donors.probable
1.10.3.-With oxygen as acceptor.probable
1.10.3.2Laccase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3ZX1, chain A
Confidence level:very confident
Coverage over the Query: 31-208,219-335,351-408,454-561
View the alignment between query and template
View the model in PyMOL
Template: 3ABG, chain A
Confidence level:very confident
Coverage over the Query: 34-208,219-337,350-376,392-410,434,455-563
View the alignment between query and template
View the model in PyMOL
Template: 2Q9O, chain A
Confidence level:very confident
Coverage over the Query: 32-375,392-429,451-579
View the alignment between query and template
View the model in PyMOL
Template: 1AOZ, chain A
Confidence level:very confident
Coverage over the Query: 33-377,392-579
View the alignment between query and template
View the model in PyMOL