Citrus Sinensis ID: 008066

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------58
MEFFNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC
cccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcccccccEEEEEEcccccccEEEEEEccEEEEEEEEcccccEEEEEcccccccccccccccccccccccccccEEEEEEEccccccEEEcccccccccccEEEEEEccccccccccccccccEEEEEcccccccHHHHHHHHHHccccccccccEEEcccccccccccccccEEEEEEcccEEEEEEEEccccccEEEEEcccEEEEEEEcccccccEEEEEEEEccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEEccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccEEEEEcccccccccccccccccccccEEEEEEEEEEEEccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEEEcccccccccccccccccccEEEEEcccccccccccccccccccccccEEEEccccEEEEEEEccccccHHHHHcHHHHHHcccEEEEEEEccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEccEEccccccEEEEcccccccEEEEEcccEEEEEEEEcccccEcEEEEcccccccHHHcccEcccEccEcccEEEEEEEEcccccEEEEEEEcccHHHHHHcccEEEEcccccccccccccccEEEEEEccccccHHHHHHHHHHcccccEccHHHcccccEcccccccccccccEEEccccEEEEEEEEcccccEEEEEEccEcEEEEEEccEEEEEEEEcEEEEccccEEEEEEEccccccccEEEEEcccccccccccccEEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccEEEEEEEccccccccccccccccccccEEEEEEcccEEccccHHHHHHHHHcccccccccccccccccEEcccccccccccccccccEEEEEEcccEEEEEEEcccEEccccccEEEcccEEEEEEcccccccHHHHccccccEcccEEcEEEEccccEEEEEEEccccEEEEEEEccHHHHHHccEEEEEEEccccccccccccccccccc
meffnsrfanSFGFFLGLVLLIASNALLSFANakahhhdfviqatpvkrlckthntitvngmypgptlevnngdtLVVKVTNKARYNVTIHWHGVRQMRtawadgpefvtqcpirpgmsytyRFTIQGQEGTLWWHAHSSWLRATVYGALiihpkegssypfpkpkretpillgewwdanpidVVRQatrtgaapnisdaytingqpgdlyncssqdtvvvpidsgetNLLRVINSGLNQPLFFTIANHqftvvgadasylkpfttsvimlgpgqttdvlikgdqppsrYYLAARAyasapnapfdnttTTAILEyksapcpakkglsirpvmpplpafndtaTVTAFTKklrspqkvevptdideslFFTVglglnncprnfrssrcqgpngtrftasmnnvsfvlpsnfsllqahhhgipgvfttdfpanppfkfdytgnvsrslwqpvpgtklykleygSRVQIVLqdtsiftpenhpihihgydFYIIaegfgnfnpktdtskfnlvdpplrntvgvpvggWAVIRFvadnpgvwlMHCHLDVHITWGLAMAFLVENGVtelekleapppdypvc
MEFFNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNtitvngmypgptlevnnGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHpkegssypfpkPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYAsapnapfdNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKklrspqkvevptdiDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTElekleapppdypvc
MEFFNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQppsryylaarayasapnapFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC
***FNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPK************ETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLR***KVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTE**************
************GFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKS***************PPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGV******EA*PPDYPVC
MEFFNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKL**********
MEFFNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPC****GLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEFFNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query579 2.2.26 [Sep-21-2011]
Q9SIY8580 Laccase-5 OS=Arabidopsis yes no 0.970 0.968 0.782 0.0
Q9FLB5565 Laccase-12 OS=Arabidopsis no no 0.963 0.987 0.784 0.0
Q941X2567 Laccase-3 OS=Oryza sativa yes no 0.948 0.968 0.718 0.0
Q56YT0570 Laccase-3 OS=Arabidopsis no no 0.968 0.984 0.671 0.0
Q2RBK2567 Putative laccase-17 OS=Or no no 0.934 0.954 0.703 0.0
Q2QYS3567 Laccase-23 OS=Oryza sativ no no 0.934 0.954 0.698 0.0
Q9LYQ2569 Laccase-13 OS=Arabidopsis no no 0.965 0.982 0.671 0.0
Q9FY79569 Laccase-14 OS=Arabidopsis no no 0.932 0.949 0.505 1e-167
Q5N9X2579 Laccase-4 OS=Oryza sativa no no 0.936 0.936 0.524 1e-167
Q0DHL2574 Laccase-12/13 OS=Oryza sa no no 0.943 0.951 0.522 1e-165
>sp|Q9SIY8|LAC5_ARATH Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1 Back     alignment and function desciption
 Score =  943 bits (2438), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/574 (78%), Positives = 498/574 (86%), Gaps = 12/574 (2%)

Query: 18  LVLLIASNALLSFANA----KAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNG 73
           L+  I+  A L F++     KAHHH+F+IQAT VKRLC+THN+ITVNGM+PGP L VNNG
Sbjct: 7   LLCFISFVAFLLFSSVAEANKAHHHEFIIQATKVKRLCETHNSITVNGMFPGPMLVVNNG 66

Query: 74  DTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTL 133
           DTLVVKV N+ARYN+TIHWHGVRQMRT WADGPEFVTQCPIRPG SYTYRFTIQGQEGTL
Sbjct: 67  DTLVVKVINRARYNITIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTL 126

Query: 134 WWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGA 193
           WWHAHSSWLRATVYG+L++ P  GSSYPF KP R  P+LLGEWWDANP+DV+R++ RTG 
Sbjct: 127 WWHAHSSWLRATVYGSLLVFPPAGSSYPFTKPHRNVPLLLGEWWDANPVDVLRESIRTGG 186

Query: 194 APNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTV 253
           APN SDAYTINGQPGDLY CSSQDT VVPI+ GET LLRVINS LNQPLFFT+ANH+ TV
Sbjct: 187 APNNSDAYTINGQPGDLYKCSSQDTTVVPINVGETILLRVINSALNQPLFFTVANHKLTV 246

Query: 254 VGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAI 313
           VGADASYLKPFTT+VI+LGPGQTTDVLI GDQPP+RYY+AARAY SA NAPF NTTTTAI
Sbjct: 247 VGADASYLKPFTTNVIVLGPGQTTDVLITGDQPPNRYYMAARAYQSAQNAPFGNTTTTAI 306

Query: 314 LEYKSAPCPA-------KKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDE 366
           L+YKSAPC         KKG S +P+MP LPA+NDT TVT F++  RS ++ EVPT+IDE
Sbjct: 307 LQYKSAPCCGVGGGSGTKKGNSFKPIMPILPAYNDTNTVTRFSQSFRSLRRAEVPTEIDE 366

Query: 367 SLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFT 426
           +LF T+GLGLNNCP+NFRS RCQGPNGTRFTASMNNVSF LPSN+SLLQAHHHGIPGVFT
Sbjct: 367 NLFVTIGLGLNNCPKNFRSRRCQGPNGTRFTASMNNVSFALPSNYSLLQAHHHGIPGVFT 426

Query: 427 TDFPANPPFKFDYTG-NVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIH 485
           TDFPA PP KFDYTG N+SRSL+QP  GTKLYKL+YGSRVQIVLQDT I TPENHPIH+H
Sbjct: 427 TDFPAKPPVKFDYTGNNISRSLYQPDRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLH 486

Query: 486 GYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHL 545
           GYDFYIIAEGFGNFNPK DT+KFNL DPPLRNTVGVPV GWAVIRF+ADNPGVW+MHCHL
Sbjct: 487 GYDFYIIAEGFGNFNPKKDTAKFNLEDPPLRNTVGVPVNGWAVIRFIADNPGVWIMHCHL 546

Query: 546 DVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC 579
           D HI+WGLAMAFLVENG   L+ +E PP D PVC
Sbjct: 547 DAHISWGLAMAFLVENGNGVLQTIEQPPHDLPVC 580
Lignin degradation and detoxification of lignin-derived products.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 2
>sp|Q9FLB5|LAC12_ARATH Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 Back     alignment and function description
>sp|Q941X2|LAC3_ORYSJ Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1 Back     alignment and function description
>sp|Q56YT0|LAC3_ARATH Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2 Back     alignment and function description
>sp|Q2RBK2|LAC17_ORYSJ Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1 Back     alignment and function description
>sp|Q2QYS3|LAC23_ORYSJ Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1 Back     alignment and function description
>sp|Q9LYQ2|LAC13_ARATH Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1 Back     alignment and function description
>sp|Q9FY79|LAC14_ARATH Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1 Back     alignment and function description
>sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query579
359486369577 PREDICTED: laccase-12-like [Vitis vinife 0.996 1.0 0.861 0.0
255559553577 laccase, putative [Ricinus communis] gi| 0.944 0.948 0.857 0.0
224109236575 laccase 90c [Populus trichocarpa] gi|222 0.993 1.0 0.823 0.0
147841649566 hypothetical protein VITISV_024159 [Viti 0.977 1.0 0.841 0.0
118481041550 unknown [Populus trichocarpa] 0.949 1.0 0.849 0.0
224101209574 laccase 90a [Populus trichocarpa] gi|222 0.941 0.949 0.851 0.0
356501207569 PREDICTED: laccase-5-like [Glycine max] 0.972 0.989 0.823 0.0
356551363569 PREDICTED: laccase-5-like [Glycine max] 0.972 0.989 0.819 0.0
255559555581 laccase, putative [Ricinus communis] gi| 0.998 0.994 0.814 0.0
224109232582 laccase 90d [Populus trichocarpa] gi|222 0.943 0.938 0.854 0.0
>gi|359486369|ref|XP_002273875.2| PREDICTED: laccase-12-like [Vitis vinifera] gi|297736547|emb|CBI25418.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1032 bits (2668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/579 (86%), Positives = 525/579 (90%), Gaps = 2/579 (0%)

Query: 1   MEFFNSRFANSFGFFLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVN 60
           ME  +   ANS  F LGL+LL+AS     F  A+ HHHDFV+QATPVKRLCKTHNTITVN
Sbjct: 1   MEALSCCIANSRSFLLGLLLLLASAVF--FTEAETHHHDFVVQATPVKRLCKTHNTITVN 58

Query: 61  GMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSY 120
           G YPGPTLE+NNGDTL VKVTNKARYNVTIHWHG+RQMRT WADGPEFVTQCPIRPG SY
Sbjct: 59  GQYPGPTLEINNGDTLEVKVTNKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGGSY 118

Query: 121 TYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDAN 180
           TYRFT+QGQEGTLWWHAHSSWLRATVYGALIIHPK GSSYPF KPKRETPILLGEWWDAN
Sbjct: 119 TYRFTVQGQEGTLWWHAHSSWLRATVYGALIIHPKPGSSYPFTKPKRETPILLGEWWDAN 178

Query: 181 PIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQ 240
           PIDVVRQATRTGAAPN+SDAYTINGQPGDLYNCSS+DTV+VPIDSGETNLLRVINSGLNQ
Sbjct: 179 PIDVVRQATRTGAAPNVSDAYTINGQPGDLYNCSSKDTVIVPIDSGETNLLRVINSGLNQ 238

Query: 241 PLFFTIANHQFTVVGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSRYYLAARAYASA 300
            LFFT+ANH+FTVV ADASY KPFTTSVIMLGPGQTTDVLI GDQPP+RYY+AARAY SA
Sbjct: 239 ELFFTVANHKFTVVSADASYTKPFTTSVIMLGPGQTTDVLITGDQPPARYYMAARAYQSA 298

Query: 301 PNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEV 360
             APFDNTTTTAILEYKSAPCPAKKG+S  PV P LPAFNDTATVTAF+K  RSP KVEV
Sbjct: 299 QGAPFDNTTTTAILEYKSAPCPAKKGVSTTPVFPSLPAFNDTATVTAFSKSFRSPAKVEV 358

Query: 361 PTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHG 420
           PTDIDESLFFTVGLGLN CP  F+SS+CQGPNGTRFTASMNNVSFVLPSNFSLLQAH  G
Sbjct: 359 PTDIDESLFFTVGLGLNRCPPKFKSSQCQGPNGTRFTASMNNVSFVLPSNFSLLQAHQQG 418

Query: 421 IPGVFTTDFPANPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENH 480
           IPGVFTTD+PA PP KFDYTGNVSRSLWQPVPGTKLYKL+YGSRVQ+VLQ TSIFT ENH
Sbjct: 419 IPGVFTTDYPAAPPVKFDYTGNVSRSLWQPVPGTKLYKLKYGSRVQVVLQGTSIFTAENH 478

Query: 481 PIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWL 540
           PIH+HGYDFYIIAEGFGNFNP TDTSKFNLVDPPLRNTV VPV GWAVIRFVADNPGVWL
Sbjct: 479 PIHLHGYDFYIIAEGFGNFNPSTDTSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVWL 538

Query: 541 MHCHLDVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC 579
           MHCHLDVHITWGLAMAFLVENGV  L+ +E PP D P+C
Sbjct: 539 MHCHLDVHITWGLAMAFLVENGVGALQSIETPPADLPLC 577

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255559553|ref|XP_002520796.1| laccase, putative [Ricinus communis] gi|223539927|gb|EEF41505.1| laccase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224109236|ref|XP_002315131.1| laccase 90c [Populus trichocarpa] gi|222864171|gb|EEF01302.1| laccase 90c [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147841649|emb|CAN75316.1| hypothetical protein VITISV_024159 [Vitis vinifera] Back     alignment and taxonomy information
>gi|118481041|gb|ABK92474.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224101209|ref|XP_002312186.1| laccase 90a [Populus trichocarpa] gi|222852006|gb|EEE89553.1| laccase 90a [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356501207|ref|XP_003519418.1| PREDICTED: laccase-5-like [Glycine max] Back     alignment and taxonomy information
>gi|356551363|ref|XP_003544045.1| PREDICTED: laccase-5-like [Glycine max] Back     alignment and taxonomy information
>gi|255559555|ref|XP_002520797.1| laccase, putative [Ricinus communis] gi|223539928|gb|EEF41506.1| laccase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224109232|ref|XP_002315130.1| laccase 90d [Populus trichocarpa] gi|222864170|gb|EEF01301.1| laccase 90d [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query579
TAIR|locus:2063109580 LAC5 "laccase 5" [Arabidopsis 0.972 0.970 0.755 9.9e-245
TAIR|locus:2153469565 LAC12 "laccase 12" [Arabidopsi 0.960 0.984 0.760 3.5e-242
TAIR|locus:2060879570 LAC3 "laccase 3" [Arabidopsis 0.977 0.992 0.646 5.1e-209
TAIR|locus:2182895569 LAC13 "laccase 13" [Arabidopsi 0.965 0.982 0.650 2.8e-208
TAIR|locus:2066117573 LAC2 "laccase 2" [Arabidopsis 0.963 0.973 0.502 3.1e-154
TAIR|locus:2184802569 LAC14 "laccase 14" [Arabidopsi 0.934 0.950 0.490 2.5e-152
TAIR|locus:2042842558 IRX12 "IRREGULAR XYLEM 12" [Ar 0.918 0.953 0.501 8.5e-152
TAIR|locus:2143563557 LAC11 "laccase 11" [Arabidopsi 0.943 0.980 0.493 8.5e-152
TAIR|locus:2150139558 LAC10 "laccase 10" [Arabidopsi 0.953 0.989 0.487 1.2e-150
TAIR|locus:2168128577 LAC17 "laccase 17" [Arabidopsi 0.963 0.967 0.492 1e-148
TAIR|locus:2063109 LAC5 "laccase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2358 (835.1 bits), Expect = 9.9e-245, P = 9.9e-245
 Identities = 433/573 (75%), Positives = 481/573 (83%)

Query:    15 FLGLVLLIASNALLSFANAKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGD 74
             F+  V  +  +++   AN KAHHH+F+IQAT VKRLC+THN+ITVNGM+PGP L VNNGD
Sbjct:    10 FISFVAFLLFSSVAE-AN-KAHHHEFIIQATKVKRLCETHNSITVNGMFPGPMLVVNNGD 67

Query:    75 TLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLW 134
             TLVVKV N+ARYN+TIHWHGVRQMRT WADGPEFVTQCPIRPG SYTYRFTIQGQEGTLW
Sbjct:    68 TLVVKVINRARYNITIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTLW 127

Query:   135 WHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAA 194
             WHAHSSWLRATVYG+L++ P  GSSYPF KP R  P+LLGEWWDANP+DV+R++ RTG A
Sbjct:   128 WHAHSSWLRATVYGSLLVFPPAGSSYPFTKPHRNVPLLLGEWWDANPVDVLRESIRTGGA 187

Query:   195 PNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVV 254
             PN SDAYTINGQPGDLY CSSQDT VVPI+ GET LLRVINS LNQPLFFT+ANH+ TVV
Sbjct:   188 PNNSDAYTINGQPGDLYKCSSQDTTVVPINVGETILLRVINSALNQPLFFTVANHKLTVV 247

Query:   255 GADASYLKPFTTSVIMLGPGQTTDVLIKGDQXXXXXXXXXXXXXXXXXXXFDNTTTTAIL 314
             GADASYLKPFTT+VI+LGPGQTTDVLI GDQ                   F NTTTTAIL
Sbjct:   248 GADASYLKPFTTNVIVLGPGQTTDVLITGDQPPNRYYMAARAYQSAQNAPFGNTTTTAIL 307

Query:   315 EYKSAPC-------PAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRSPQKVEVPTDIDES 367
             +YKSAPC         KKG S +P+MP LPA+NDT TVT F++  RS ++ EVPT+IDE+
Sbjct:   308 QYKSAPCCGVGGGSGTKKGNSFKPIMPILPAYNDTNTVTRFSQSFRSLRRAEVPTEIDEN 367

Query:   368 LFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTT 427
             LF T+GLGLNNCP+NFRS RCQGPNGTRFTASMNNVSF LPSN+SLLQAHHHGIPGVFTT
Sbjct:   368 LFVTIGLGLNNCPKNFRSRRCQGPNGTRFTASMNNVSFALPSNYSLLQAHHHGIPGVFTT 427

Query:   428 DFPANPPFKFDYTGN-VSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHG 486
             DFPA PP KFDYTGN +SRSL+QP  GTKLYKL+YGSRVQIVLQDT I TPENHPIH+HG
Sbjct:   428 DFPAKPPVKFDYTGNNISRSLYQPDRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLHG 487

Query:   487 YDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLD 546
             YDFYIIAEGFGNFNPK DT+KFNL DPPLRNTVGVPV GWAVIRF+ADNPGVW+MHCHLD
Sbjct:   488 YDFYIIAEGFGNFNPKKDTAKFNLEDPPLRNTVGVPVNGWAVIRFIADNPGVWIMHCHLD 547

Query:   547 VHITWGLAMAFLVENGVTELEKLEAPPPDYPVC 579
              HI+WGLAMAFLVENG   L+ +E PP D PVC
Sbjct:   548 AHISWGLAMAFLVENGNGVLQTIEQPPHDLPVC 580
GO:0005507 "copper ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0046274 "lignin catabolic process" evidence=IEA
GO:0048046 "apoplast" evidence=IEA
GO:0052716 "hydroquinone:oxygen oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0046688 "response to copper ion" evidence=IEP
TAIR|locus:2153469 LAC12 "laccase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060879 LAC3 "laccase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182895 LAC13 "laccase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2066117 LAC2 "laccase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184802 LAC14 "laccase 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042842 IRX12 "IRREGULAR XYLEM 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143563 LAC11 "laccase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150139 LAC10 "laccase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168128 LAC17 "laccase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FLB5LAC12_ARATH1, ., 1, 0, ., 3, ., 20.78400.96370.9876nono
Q941X2LAC3_ORYSJ1, ., 1, 0, ., 3, ., 20.71840.94810.9682yesno
Q9SIY8LAC5_ARATH1, ., 1, 0, ., 3, ., 20.78220.97060.9689yesno
Q2RBK2LAC17_ORYSJ1, ., 1, 0, ., 3, ., 20.70360.93430.9541nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.30.983
3rd Layer1.10.3.20.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query579
TIGR03389539 TIGR03389, laccase, laccase, plant 0.0
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 2e-92
PLN02604566 PLN02604, PLN02604, oxidoreductase 8e-79
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 1e-71
pfam07732119 pfam07732, Cu-oxidase_3, Multicopper oxidase 9e-55
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 3e-44
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 1e-41
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 8e-41
PLN02835539 PLN02835, PLN02835, oxidoreductase 3e-40
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 1e-39
PLN00044596 PLN00044, PLN00044, multi-copper oxidase-related p 2e-38
PLN02991543 PLN02991, PLN02991, oxidoreductase 5e-37
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 4e-33
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 1e-30
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 2e-30
PLN02792536 PLN02792, PLN02792, oxidoreductase 3e-29
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 2e-12
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 6e-11
PRK10965523 PRK10965, PRK10965, multicopper oxidase; Provision 1e-07
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information 
 Score =  874 bits (2260), Expect = 0.0
 Identities = 341/552 (61%), Positives = 408/552 (73%), Gaps = 18/552 (3%)

Query: 33  AKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHW 92
           A+  H+ F +Q   V RLC T + +TVNG +PGPTL    GDT++V VTN  +YNVTIHW
Sbjct: 1   AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHW 60

Query: 93  HGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALII 152
           HGVRQ+R  WADGP ++TQCPI+PG SY Y FTI GQ GTLWWHAH SWLRATVYGA++I
Sbjct: 61  HGVRQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVI 120

Query: 153 HPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYN 212
            PK G  YPFPKP RE PI+LGEWW+A+   V+ QA +TG APN+SDAYTING PG LYN
Sbjct: 121 LPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYN 180

Query: 213 CSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLG 272
           CSS+DT  + ++ G+T LLR+IN+ LN  LFF IANH  TVV  DA+Y KPF T  I++G
Sbjct: 181 CSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240

Query: 273 PGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPV 332
           PGQTT+VL+  DQ P RY++AAR Y  AP A FDNTTTTAIL+YK          S +P+
Sbjct: 241 PGQTTNVLLTADQSPGRYFMAARPYMDAPGA-FDNTTTTAILQYKGTSN------SAKPI 293

Query: 333 MPPLPAFNDTATVTAFTKKLRS----PQKVEVPTDIDESLFFTVGLGLNNCPRNFRSSRC 388
           +P LPA+NDTA  T F+ KLRS         VP  ID  LFFT+GLGL+ CP N     C
Sbjct: 294 LPTLPAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNN----TC 349

Query: 389 QGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTG-NVSRSL 447
           QGPNGTRF ASMNN+SFV+P   +LLQAH+ GI GVFTTDFPANPP KF+YTG N+  +L
Sbjct: 350 QGPNGTRFAASMNNISFVMP-TTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNL 408

Query: 448 WQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSK 507
           +    GTK+ +L++ S V++VLQDTSI   ENHPIH+HGY+F+++  GFGNF+PK D +K
Sbjct: 409 FTTN-GTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAK 467

Query: 508 FNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELE 567
           FNLVDPP RNTVGVP GGWA IRFVADNPGVW MHCHL+VH TWGL MAFLV+NG    +
Sbjct: 468 FNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQ 527

Query: 568 KLEAPPPDYPVC 579
            L  PP D P C
Sbjct: 528 SLLPPPSDLPSC 539

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information
>gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 579
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
PLN00044596 multi-copper oxidase-related protein; Provisional 100.0
PLN02991543 oxidoreductase 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN02835539 oxidoreductase 100.0
PLN02792536 oxidoreductase 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
PLN02604566 oxidoreductase 100.0
PLN02191574 L-ascorbate oxidase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
PRK10883471 FtsI repressor; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 100.0
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 100.0
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.96
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 99.94
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 99.71
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 99.71
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.71
PRK10965523 multicopper oxidase; Provisional 99.57
PRK10883471 FtsI repressor; Provisional 99.51
PLN02835539 oxidoreductase 99.5
TIGR03389539 laccase laccase, plant. Members of this protein fa 99.47
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 99.42
COG2132451 SufI Putative multicopper oxidases [Secondary meta 99.35
PLN02168545 copper ion binding / pectinesterase 99.26
PLN02991543 oxidoreductase 99.26
PLN02354552 copper ion binding / oxidoreductase 99.23
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 99.22
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 99.22
PLN02792536 oxidoreductase 99.21
PLN02604566 oxidoreductase 99.18
PLN02191574 L-ascorbate oxidase 99.05
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.01
PLN00044596 multi-copper oxidase-related protein; Provisional 98.91
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 98.82
PRK02710119 plastocyanin; Provisional 98.81
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 98.78
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 98.54
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 98.24
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 98.18
TIGR0265783 amicyanin amicyanin. Members of this family are am 98.17
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 98.06
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 98.05
PRK02888635 nitrous-oxide reductase; Validated 97.96
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 97.6
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 97.57
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 97.55
COG3794128 PetE Plastocyanin [Energy production and conversio 97.53
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 97.36
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 97.27
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 97.19
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 97.15
PRK02888635 nitrous-oxide reductase; Validated 96.64
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.48
PRK02710119 plastocyanin; Provisional 95.82
COG4454158 Uncharacterized copper-binding protein [Inorganic 95.07
PRK10378375 inactive ferrous ion transporter periplasmic prote 95.01
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 94.95
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 94.21
COG4454158 Uncharacterized copper-binding protein [Inorganic 94.15
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 94.11
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 93.06
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 92.31
TIGR0265783 amicyanin amicyanin. Members of this family are am 92.3
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 91.05
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 90.4
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 88.22
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 86.72
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 85.88
COG3794128 PetE Plastocyanin [Energy production and conversio 85.52
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 84.63
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 84.35
COG1470513 Predicted membrane protein [Function unknown] 81.33
>TIGR03389 laccase laccase, plant Back     alignment and domain information 
Probab=100.00  E-value=5e-105  Score=865.78  Aligned_cols=534  Identities=63%  Similarity=1.163  Sum_probs=436.9

Q ss_pred             CceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCCceEEeCCccccCCCCCCCCCccccc
Q 008066           33 AKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTAWADGPEFVTQC  112 (579)
Q Consensus        33 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~~~~siH~HG~~~~~~~~~DGv~~~~~~  112 (579)
                      +++|+|+|+|++..+++||+.+++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.+++|+||++++|||
T Consensus         1 ~~~r~y~~~it~~~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q~~~~~~DGv~~vTq~   80 (539)
T TIGR03389         1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQC   80 (539)
T ss_pred             CceEEEEEEEEEEEeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeCCCCCeeEecCCCCCCCCCCCCCCcccccC
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCeEEEEEEecCCCcceeeeecccccccceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHHHHHhhhCC
Q 008066          113 PIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATRTG  192 (579)
Q Consensus       113 ~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g  192 (579)
                      +|+||++|+|+|++++++||||||||...+++||+|+|||+++.+.+++++..|+|++|+++||++......+......|
T Consensus        81 pI~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~  160 (539)
T TIGR03389        81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG  160 (539)
T ss_pred             CcCCCCeEEEEEEecCCCeeEEEecCchhhhccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcC
Confidence            99999999999998669999999999988888999999999988767777777899999999999998877776666566


Q ss_pred             CCCCCCceEEEcCCCCCCCCCCCCCeeeEEEecCCEEEEEEeecCCCccEEEEEcCCeeEEEeeCCcccCceEEeEEEEC
Q 008066          193 AAPNISDAYTINGQPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIMLG  272 (579)
Q Consensus       193 ~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~  272 (579)
                      ..+..+++++|||+.+++++|+....+.+++++|++|||||||+|+...+.|+|+||+|+|||+||.+++|+.++++.|+
T Consensus       161 ~~~~~~d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i~  240 (539)
T TIGR03389       161 GAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG  240 (539)
T ss_pred             CCCCccceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeCeEEec
Confidence            55667799999999988889987777899999999999999999999999999999999999999999999999999999


Q ss_pred             cccEEEEEEEcCCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCCCCCCCCCCCCCccchhhcccCc
Q 008066          273 PGQTTDVLIKGDQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKL  352 (579)
Q Consensus       273 pG~R~dv~v~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~  352 (579)
                      +||||||+|++++.+|+|||++....++.. .+......|||+|++....      ..+..+..+.+++..........+
T Consensus       241 ~GqRydVlv~a~~~~g~y~i~~~~~~~~~~-~~~~~~~~ail~Y~~~~~~------~~p~~~~~~~~~~~~~~~~~~~~l  313 (539)
T TIGR03389       241 PGQTTNVLLTADQSPGRYFMAARPYMDAPG-AFDNTTTTAILQYKGTSNS------AKPILPTLPAYNDTAAATNFSNKL  313 (539)
T ss_pred             CCCEEEEEEECCCCCceEEEEEeccccCcc-CCCCcceEEEEEECCCCCC------CCCCCCCCCCCCchhhhhHHHhhc
Confidence            999999999999888999999987654431 1234568999999975441      111112222222221111111123


Q ss_pred             CCCC----CCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCC
Q 008066          353 RSPQ----KVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTD  428 (579)
Q Consensus       353 ~~l~----p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~  428 (579)
                      +.+.    +..+|...++++++.+.+......    ...+...++..+.|.+|+++|..|.+ +++++.+.+..+.+.++
T Consensus       314 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~w~in~~s~~~p~~-p~l~~~~~~~~~~~~~~  388 (539)
T TIGR03389       314 RSLNSAQYPANVPVTIDRRLFFTIGLGLDPCP----NNTCQGPNGTRFAASMNNISFVMPTT-ALLQAHYFGISGVFTTD  388 (539)
T ss_pred             ccccccCCCCCCCCCCCeEEEEEeecccccCc----ccccccCCCcEEEEEECCcccCCCCc-chhhhhhcccCCccccC
Confidence            3222    223445667777766655432110    00112224557889999999998887 56666555555666667


Q ss_pred             CCCCCCccccCCCCC-CcCccccCCCceeEEeecCcEEEEEEecCCCCCCCCCCeeeeccceEEEEecCCCCCCCCCCCC
Q 008066          429 FPANPPFKFDYTGNV-SRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTPENHPIHIHGYDFYIIAEGFGNFNPKTDTSK  507 (579)
Q Consensus       429 ~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~  507 (579)
                      ++..+|+.|++++.. +..+ ....+++++.++.|++|||+|+|.+.+....||||||||+||||++|.|.|+.......
T Consensus       389 ~~~~~p~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~  467 (539)
T TIGR03389       389 FPANPPTKFNYTGTNLPNNL-FTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAK  467 (539)
T ss_pred             CccCCCccccCCCCCccccc-ccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccc
Confidence            777788888766542 1111 12336788999999999999999653335589999999999999999999987655557


Q ss_pred             CCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCccccccCCCCCCCCCCC
Q 008066          508 FNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC  579 (579)
Q Consensus       508 ~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~~~~~p~~~~~c  579 (579)
                      +|+.||++|||+.||++||++|||+|||||.|+|||||+||+..||+++|.+.++++..++++.||..+|+|
T Consensus       468 ~nl~nP~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c  539 (539)
T TIGR03389       468 FNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC  539 (539)
T ss_pred             cccCCCCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCCCccCCCC
Confidence            899999999999999999999999999999999999999999999999999988887788899999999999

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>COG1470 Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query579
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 1e-57
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 3e-38
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 5e-38
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 8e-38
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 8e-38
1gyc_A499 Crystal Structure Determination At Room Temperature 1e-37
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 8e-35
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 9e-35
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 2e-33
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 8e-33
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 1e-32
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 1e-32
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 1e-32
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 1e-31
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 2e-27
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 1e-18
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 2e-27
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 2e-18
1zpu_A534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 4e-27
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 2e-25
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 1e-10
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 2e-24
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 5e-10
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 1e-22
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 2e-08
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 3e-20
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 2e-11
3g5w_A318 Crystal Structure Of Blue Copper Oxidase From Nitro 1e-18
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 8e-18
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 9e-13
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 1e-17
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 6e-15
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 2e-17
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 7e-15
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 2e-17
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 6e-15
2xu9_A439 Crystal Structure Of Laccase From Thermus Thermophi 8e-15
3zx1_A481 Multicopper Oxidase From Campylobacter Jejuni: A Me 1e-12
3zx1_A481 Multicopper Oxidase From Campylobacter Jejuni: A Me 5e-04
3gdc_A288 Crystal Structure Of Multicopper Oxidase Length = 2 4e-10
3aw5_A448 Structure Of A Multicopper Oxidase From The Hyperth 3e-05
3abg_A534 X-Ray Crystal Analysis Of Bilirubin Oxidase From My 6e-04
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  220 bits (561), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 166/554 (29%), Positives = 255/554 (46%), Gaps = 76/554 (13%)
Query: 51  CKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKARYN-VTIHWHGVRQMRTAWADGPEFV 109
           C  +  + +NG +PGPT+  N GD++VV++TNK     V IHWHG+ Q  T WADG   +
Sbjct: 19  CNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASI 78
Query: 110 TQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLR-ATVYGALIIHPKEGSSYPFPKPKRE 168
           +QC I PG ++ Y FT+    GT ++H H    R A +YG+LI+ P +G   PF     E
Sbjct: 79  SQCAINPGETFFYNFTVD-NPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGE 136
Query: 169 TPILLGEWW-----------DANPIDVVRQAT------RTGAAPNISDAYTINGQPGDLY 211
             +LL +WW            + PI  + +        R     +I+  Y  N +P  L 
Sbjct: 137 INLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLK 196
Query: 212 NCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTVVGADASYLKPFTTSVIML 271
              S    +  +   +T  +R+ ++     L F I NHQ  VV AD +Y++PF TS I +
Sbjct: 197 GSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDI 256
Query: 272 GPGQTTDVLIKGDQXXXXXXXXXXXXXXXXXXXFDNTTTTAILEYKSAPCPAKKGLSIRP 331
             G++  VLI  DQ                       T   +L Y          +S  P
Sbjct: 257 YSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLT---LLNY------LPNSVSKLP 307
Query: 332 VMPP--LPAFNDTATVTAFTKKLRSPQKV-EVPTDIDESLFFTVGLGLNNCPRNFRSSRC 388
             PP   PA++D      FT ++ +     + P   +  +F    L   N    +     
Sbjct: 308 TSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFL---LNTQNVINGY----- 359
Query: 389 QGPNGTRFTASMNNVSFVLP-------SNFSLLQAHHHGIPGVFTTDFPANPP---FKFD 438
                     ++N+VS  LP         ++LL A            F  NPP   F  D
Sbjct: 360 -------VKWAINDVSLALPPTPYLGAMKYNLLHA------------FDQNPPPEVFPED 400
Query: 439 YTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTP---ENHPIHIHGYDFYIIAEG 495
           Y  +   +  +   G  +Y+ + G  V ++LQ+ ++      E HP H+HG+DF+++  G
Sbjct: 401 YDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYG 460
Query: 496 FGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAM 555
            G F+ + ++S  NL +PPLRNTV +   GW  IRFVADNPGVW  HCH++ H+  G+ +
Sbjct: 461 DGKFSAEEESS-LNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGV 519
Query: 556 AFLVENGVTELEKL 569
            F    GV ++ ++
Sbjct: 520 VF--AEGVEKVGRI 531
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 Back     alignment and structure
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 Back     alignment and structure
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 Back     alignment and structure
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase Length = 288 Back     alignment and structure
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The Hyperthermophilic Archaeon Pyrobaculum Aerophilum Length = 448 Back     alignment and structure
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From Myrothecium Verrucaria At 2.3 Angstrom Resolution Using A Twin Crystal Length = 534 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query579
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 0.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 0.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 0.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 0.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 0.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 0.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 0.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 0.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 1e-112
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 7e-10
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 1e-107
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 1e-10
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 1e-66
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 1e-61
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 2e-15
3gdc_A 288 Multicopper oxidase; beta sandwich, plasmid, oxido 6e-04
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 5e-52
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 1e-41
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 2e-16
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 2e-04
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 1e-41
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 9e-15
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 4e-04
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 3e-38
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 4e-12
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 3e-36
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 2e-35
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 3e-09
2zoo_A442 Probable nitrite reductase; electron transfer, ele 1e-33
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 4e-10
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 1e-31
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 3e-10
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 9e-31
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 6e-09
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 1e-30
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 7e-29
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 3e-09
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 3e-30
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 8e-29
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 3e-18
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-12
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 4e-08
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 4e-07
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 7e-30
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 4e-10
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 7e-08
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 1e-28
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 2e-11
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 9e-28
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 1e-12
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 4e-27
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 4e-12
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 2e-22
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 2e-07
2bw4_A 340 Copper-containing nitrite reductase; oxidoreductas 4e-04
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 1e-20
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 1e-07
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 1e-18
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 4e-06
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 6e-16
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 1e-08
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  635 bits (1641), Expect = 0.0
 Identities = 162/571 (28%), Positives = 255/571 (44%), Gaps = 57/571 (9%)

Query: 33  AKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-YNVTIH 91
           ++  H+ + ++       C  +  + +NG +PGPT+  N GD++VV++TNK     V IH
Sbjct: 1   SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60

Query: 92  WHGVRQMRTAWADGPEFVTQCPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLR-ATVYGAL 150
           WHG+ Q  T WADG   ++QC I PG ++ Y FT+    GT ++H H    R A +YG+L
Sbjct: 61  WHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSL 119

Query: 151 IIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQA-TRTGAAPNISDAYTING---- 205
           I+ P +G   PF     E  +LL +WW  +         ++            +NG    
Sbjct: 120 IVDPPQGKKEPFHYDG-EINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQF 178

Query: 206 ------------QPGDLYNCSSQDTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQFTV 253
                       +P  L    S    +  +   +T  +R+ ++     L F I NHQ  V
Sbjct: 179 DCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238

Query: 254 VGADASYLKPFTTSVIMLGPGQTTDVLIKGDQPPSR-YYLAARAYASAPNAPFDNTTTTA 312
           V AD +Y++PF TS I +  G++  VLI  DQ PS  Y+++    A  P    +      
Sbjct: 239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP----NTPPGLT 294

Query: 313 ILEYKSAPCPAKKGLSIRPVMPPLPAFNDTATVTAFTKKLRS-PQKVEVPTDIDESLFFT 371
           +L Y                 P  PA++D      FT ++ +     + P   +  +F  
Sbjct: 295 LLNYLPNSVSKLPT----SPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLL 350

Query: 372 VGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPA 431
                            Q         ++N+VS  LP     L A  + +   F  + P 
Sbjct: 351 N---------------TQNVINGYVKWAINDVSLALPP-TPYLGAMKYNLLHAFDQNPP- 393

Query: 432 NPPFKFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFTP---ENHPIHIHGYD 488
              F  DY  +   +  +   G  +Y+ + G  V ++LQ+ ++      E HP H+HG+D
Sbjct: 394 PEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHD 453

Query: 489 FYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVH 548
           F+++  G G F+ + + S  NL +PPLRNTV +   GW  IRFVADNPGVW  HCH++ H
Sbjct: 454 FWVLGYGDGKFSAE-EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPH 512

Query: 549 ITWGLAMAFLVENGVTELEKLEAPPPDYPVC 579
           +  G+ + F         EK+   P     C
Sbjct: 513 LHMGMGVVFAEGV-----EKVGRIPTKALAC 538
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query579
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 100.0
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 100.0
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 100.0
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 100.0
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 100.0
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 100.0
2zoo_A442 Probable nitrite reductase; electron transfer, ele 100.0
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 100.0
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 100.0
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 100.0
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 100.0
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 100.0
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 100.0
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.96
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.96
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.95
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.95
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.95
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.95
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.95
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.9
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.89
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.87
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.86
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.84
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.82
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.79
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 99.78
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 99.77
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 99.77
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 99.7
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 99.7
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 99.69
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 99.64
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 99.63
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 99.62
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 99.61
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 99.61
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 99.59
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 99.58
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 99.57
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 99.56
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 99.52
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.51
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 99.4
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 99.39
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 99.34
2cal_A154 Rusticyanin; iron respiratory electron transport c 99.33
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 99.22
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 99.14
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.11
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 99.08
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.92
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 98.87
3c75_A132 Amicyanin; copper proteins, electron transfer comp 98.83
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.79
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.74
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.65
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.64
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.61
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.56
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.56
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.54
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.53
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.46
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.43
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.42
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.42
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 98.41
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.4
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 98.4
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 98.39
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 98.37
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.37
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.32
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.3
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 98.29
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 98.26
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 98.14
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.14
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 98.12
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 98.07
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 98.06
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 98.06
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 98.05
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 98.02
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.01
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 97.98
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 97.96
2cal_A154 Rusticyanin; iron respiratory electron transport c 97.95
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 97.91
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 97.87
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 97.55
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 97.3
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 97.29
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 97.28
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 97.24
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 97.11
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 97.09
3c75_A132 Amicyanin; copper proteins, electron transfer comp 96.96
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 96.66
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 96.51
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 96.46
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 96.1
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 95.6
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 95.58
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 95.48
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 94.9
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 94.11
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 94.02
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 93.23
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 91.93
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 91.55
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 86.12
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=1e-97  Score=816.56  Aligned_cols=509  Identities=30%  Similarity=0.574  Sum_probs=404.5

Q ss_pred             CceEEEEEEEEEEeeecCceeeeEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CCceEEeCCccccCCCCCCCCCcccc
Q 008066           33 AKAHHHDFVIQATPVKRLCKTHNTITVNGMYPGPTLEVNNGDTLVVKVTNKAR-YNVTIHWHGVRQMRTAWADGPEFVTQ  111 (579)
Q Consensus        33 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pgP~i~v~~Gd~v~v~l~N~l~-~~~siH~HG~~~~~~~~~DGv~~~~~  111 (579)
                      +++|+|+|+|++..+++||..+++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++++|
T Consensus         1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq   80 (552)
T 1aoz_A            1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ   80 (552)
T ss_dssp             CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred             CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence            36899999999999999999999999999999999999999999999999998 99999999999999999999999999


Q ss_pred             cccCCCCeEEEEEEecCCCcceeeeeccccccc-ceeeeEEEeCCCCCCCCCCCCCCceeEEeeeeccCChHHHHHHhhh
Q 008066          112 CPIRPGMSYTYRFTIQGQEGTLWWHAHSSWLRA-TVYGALIIHPKEGSSYPFPKPKRETPILLGEWWDANPIDVVRQATR  190 (579)
Q Consensus       112 ~~i~PG~~~~y~f~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~  190 (579)
                      |+|+||++|+|+|++ +++||||||||...++. ||+|+|||+++++...+++ .|+|++|+++||++....+.......
T Consensus        81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~~  158 (552)
T 1aoz_A           81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSS  158 (552)
T ss_dssp             CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSC-CSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred             CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCC-CCccceEEeecccCCCHHHHHhhhhc
Confidence            999999999999998 89999999999988886 9999999999875544543 46899999999999887766544332


Q ss_pred             CC-CCCCCCceEEEcCCCCCCCCC-------------CCC-----CeeeEEEecCCEEEEEEeecCCCccEEEEEcCCee
Q 008066          191 TG-AAPNISDAYTINGQPGDLYNC-------------SSQ-----DTVVVPIDSGETNLLRVINSGLNQPLFFTIANHQF  251 (579)
Q Consensus       191 ~g-~~~~~~~~~liNG~~~~~~~~-------------~~~-----~~~~~~v~~G~~~rlRliN~g~~~~~~~~l~gh~~  251 (579)
                      .. .....++.++|||+..  ++|             +..     ..+.+++++|++|||||||+|..+.+.|+|+||+|
T Consensus       159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~  236 (552)
T 1aoz_A          159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL  236 (552)
T ss_dssp             SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred             ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence            21 1112467999999984  333             221     12379999999999999999999999999999999


Q ss_pred             EEEeeCCcccCceEEeEEEECcccEEEEEEEc-CCCCcceEEEEEeccCCCCCCCCCcceEEEEEeccCCCCCCCCCCCC
Q 008066          252 TVVGADASYLKPFTTSVIMLGPGQTTDVLIKG-DQPPSRYYLAARAYASAPNAPFDNTTTTAILEYKSAPCPAKKGLSIR  330 (579)
Q Consensus       252 ~via~DG~~~~p~~~d~l~l~pG~R~dv~v~~-~~~~g~~~l~~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~~~~  330 (579)
                      +|||+||.+++|+.++++.|+|||||||+|++ ++.+|+|+|+++... +.   .+.....++|+|.+.....    .+.
T Consensus       237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~---~~~~~~~ail~y~~~~~~~----~p~  308 (552)
T 1aoz_A          237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH---PNTPPGLTLLNYLPNSVSK----LPT  308 (552)
T ss_dssp             EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC---CCSCCEEEEEEETTSCTTS----CCS
T ss_pred             EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC---CCCccEEEEEEECCCCCCC----CCC
Confidence            99999999999999999999999999999999 446799999999764 21   1345688999998765311    111


Q ss_pred             CCCCCCCCCCCccchhhcccCcCCCC---CCCCCCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeec
Q 008066          331 PVMPPLPAFNDTATVTAFTKKLRSPQ---KVEVPTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVL  407 (579)
Q Consensus       331 ~~~p~~p~~~~~~~~~~~~~~~~~l~---p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~  407 (579)
                      +..|..+.+++......+.  ++.+.   +...+...++++.+....+..              . ..+.|++||++|..
T Consensus       309 ~~~p~~p~~~~~~~~~~~~--l~~l~~~~~~~~~~~~~~~~~l~~~~~~~--------------~-~~~~w~iNg~s~~~  371 (552)
T 1aoz_A          309 SPPPQTPAWDDFDRSKNFT--YRITAAMGSPKPPVKFNRRIFLLNTQNVI--------------N-GYVKWAINDVSLAL  371 (552)
T ss_dssp             SCCCCCCCTTCHHHHHHHH--TTCCBCTTCCCCCSSCSEEEEEEEEEEEE--------------T-TEEEEEETTEEECC
T ss_pred             CCCCCCCcccccccccccc--ccccccCCCCCCCCCCcEEEEEEEeeccC--------------C-CeEEEEECCCccCC
Confidence            1223444445433222111  22222   333456778888877654321              1 25679999999998


Q ss_pred             CCchhhhhhcccCCCCcccCCCCCCCCc-cccCCCCCCcCccccCCCceeEEeecCcEEEEEEecCCCCC---CCCCCee
Q 008066          408 PSNFSLLQAHHHGIPGVFTTDFPANPPF-KFDYTGNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIFT---PENHPIH  483 (579)
Q Consensus       408 p~~~~~l~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~~---~~~HP~H  483 (579)
                      |.. ++|.+.+.+.++.|..+++..++. .|+...  +..+...+.++.++.++.|++|||+|+|.+.+.   ...||||
T Consensus       372 p~~-P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~H  448 (552)
T 1aoz_A          372 PPT-PYLGAMKYNLLHAFDQNPPPEVFPEDYDIDT--PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWH  448 (552)
T ss_dssp             CSS-CHHHHHHTTCTTSSCCSCCCSCCCTTCCTTS--CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEE
T ss_pred             CCC-CHHHHHhhcCccccccCCCcccccccccccc--ccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEE
Confidence            877 666666555566666666543321 233321  111112345677899999999999999976433   5679999


Q ss_pred             eeccceEEEEecCCCCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCc
Q 008066          484 IHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGV  563 (579)
Q Consensus       484 lHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~  563 (579)
                      ||||+||||+++.|.|++ .+...+|+.+|.|||||.||++||++|||+|||||.|+|||||+||++.|||++|.|..  
T Consensus       449 LHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~--  525 (552)
T 1aoz_A          449 LHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV--  525 (552)
T ss_dssp             ETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG--
T ss_pred             EcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc--
Confidence            999999999999999987 45567899999999999999999999999999999999999999999999999998643  


Q ss_pred             cccccCCCCCCCCCCC
Q 008066          564 TELEKLEAPPPDYPVC  579 (579)
Q Consensus       564 ~~~~~~~~~p~~~~~c  579 (579)
                         .+++.+|.++++|
T Consensus       526 ---~~~~~~P~~~~~C  538 (552)
T 1aoz_A          526 ---EKVGRIPTKALAC  538 (552)
T ss_dssp             ---GGCCCCCHHHHSS
T ss_pred             ---hhhccCCcchhhh
Confidence               3677789999999
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 579
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 4e-45
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 1e-36
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 2e-36
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 7e-35
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 1e-34
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 1e-04
d1hfua1131 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin 2e-33
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 4e-33
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 3e-05
d1v10a1136 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T 3e-32
d1v10a1136 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T 5e-04
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 4e-31
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 5e-30
d2q9oa3216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 1e-27
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 4e-26
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 7e-26
d1oe2a1159 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige 5e-24
d1kv7a1140 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch 6e-24
d1gska3154 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba 4e-23
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 6e-23
d2j5wa1192 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie 9e-23
d2j5wa1192 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie 8e-05
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 2e-22
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 0.001
d1gska2174 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba 5e-22
d1kbva1151 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser 1e-21
d1kbva1151 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser 0.001
d1sdda1180 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t 5e-21
d1sdda1180 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t 1e-04
d2j5wa3207 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap 5e-21
d1kv7a3181 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc 2e-20
d1kv7a3181 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc 6e-04
d2bw4a1157 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige 6e-20
d1mzya1153 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba 2e-19
d2j5wa4179 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap 6e-19
d1gska1181 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci 3e-18
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 2e-17
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 1e-05
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 3e-16
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 4e-13
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 3e-09
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 6e-13
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 4e-10
d1kcwa2146 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap 1e-11
d1kcwa2146 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap 5e-07
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 8e-10
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 8e-09
d1sdda2116 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos 1e-08
d1sdda2116 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos 2e-06
d1sddb167 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (B 7e-07
d1fwxa1132 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-ter 1e-06
d2bw4a2173 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcali 1e-05
d1kbva2151 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse 6e-04
d1kbva2151 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse 0.001
d1ibya_112 b.6.1.4 (A:) Red copper protein nitrosocyanin {Nit 9e-04
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score =  156 bits (396), Expect = 4e-45
 Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 11/195 (5%)

Query: 388 CQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYTGNVSRSL 447
            Q         ++N+VS  LP     L A  + +   F  + P    F  DY  +   + 
Sbjct: 14  TQNVINGYVKWAINDVSLALPP-TPYLGAMKYNLLHAFDQNPPP-EVFPEDYDIDTPPTN 71

Query: 448 WQPVPGTKLYKLEYGSRVQIVLQDTSIF---TPENHPIHIHGYDFYIIAEGFGNFNPKTD 504
            +   G  +Y+ + G  V ++LQ+ ++      E HP H+HG+DF+++  G G F+   +
Sbjct: 72  EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA-EE 130

Query: 505 TSKFNLVDPPLRNTVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVT 564
            S  NL +PPLRNTV +   GW  IRFVADNPGVW  HCH++ H+  G+ + F       
Sbjct: 131 ESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAE----- 185

Query: 565 ELEKLEAPPPDYPVC 579
            +EK+   P     C
Sbjct: 186 GVEKVGRIPTKALAC 200
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 67 Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 132 Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 173 Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Length = 112 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query579
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.98
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 99.97
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.97
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.97
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.97
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.97
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.97
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.96
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.96
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.96
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.96
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.95
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.95
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.95
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.95
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.94
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.94
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.93
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.91
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.88
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.87
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.85
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.85
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.84
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.83
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.82
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.82
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.81
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.81
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.79
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.68
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.65
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.63
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.62
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.62
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.6
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.59
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 99.57
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 99.53
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.5
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.49
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.41
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.37
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.34
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.33
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.28
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.25
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.23
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.22
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 99.18
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.16
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.16
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.12
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.02
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 99.01
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.01
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.0
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.99
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 98.97
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 98.96
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.83
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.8
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 98.74
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.61
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.61
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 98.56
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 98.54
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.41
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.39
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 98.36
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 98.34
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 98.34
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.33
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.27
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.19
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 98.18
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 98.17
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 98.16
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 98.08
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 98.07
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 98.06
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 98.04
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 98.03
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 98.01
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 98.0
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 97.99
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 97.98
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.93
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 97.89
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 97.87
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 97.85
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 97.84
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 97.75
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 97.72
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 97.71
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 97.71
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.68
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 97.67
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.49
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.36
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 97.24
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.2
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 97.0
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 96.93
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 96.92
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 96.91
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 96.78
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 96.78
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 96.78
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 96.17
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 96.01
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 96.0
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 95.71
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 95.7
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 95.47
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 95.42
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 95.34
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 95.31
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 95.31
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 95.24
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 95.12
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 94.86
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 94.32
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 91.51
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 82.05
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=100.00  E-value=4.4e-38  Score=296.72  Aligned_cols=196  Identities=33%  Similarity=0.626  Sum_probs=148.8

Q ss_pred             CCCCceeEEEEeccCcCCCCCCCCCCcccCCCCCeeeeeecceeeecCCchhhhhhcccCCCCcccCCCCCCCCccccCC
Q 008066          361 PTDIDESLFFTVGLGLNNCPRNFRSSRCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHHGIPGVFTTDFPANPPFKFDYT  440 (579)
Q Consensus       361 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~  440 (579)
                      |.+.++++.+....+..              +| ..+|++||.+|..|.+ ++|.+.+.+..+.+.++++.... .+++.
T Consensus         2 P~~~~~ti~l~~~~~~~--------------ng-~~~~~iNniSf~~P~~-P~l~~~~~~~~~~~~~~~~~~~~-~~~~~   64 (214)
T d1aoza3           2 PVKFNRRIFLLNTQNVI--------------NG-YVKWAINDVSLALPPT-PYLGAMKYNLLHAFDQNPPPEVF-PEDYD   64 (214)
T ss_dssp             CSSCSEEEEEEEEEEEE--------------TT-EEEEEETTEEECCCSS-CHHHHHHTTCTTSSCCSCCCSCC-CTTCC
T ss_pred             CCCCCeEEEEecCcccc--------------CC-eEEEEECCEeccCCCc-chHHHHhhccccccccCCCcccc-ccccc
Confidence            45778888886554431              33 5679999999999998 55555554444455444432111 11112


Q ss_pred             CCCCcCccccCCCceeEEeecCcEEEEEEecCCCC---CCCCCCeeeeccceEEEEecCCCCCCCCCCCCCCCCCCCcce
Q 008066          441 GNVSRSLWQPVPGTKLYKLEYGSRVQIVLQDTSIF---TPENHPIHIHGYDFYIIAEGFGNFNPKTDTSKFNLVDPPLRN  517 (579)
Q Consensus       441 ~~~~~~~~~~~~~~~~~~~~~G~~ve~~l~n~~~~---~~~~HP~HlHG~~F~vv~~g~g~~~~~~~~~~~~~~~p~~rD  517 (579)
                      ...+......+.+++++.+++|++|||+|+|.+.+   ....||||||||+|||++++.|.++... ...+++.+|.+||
T Consensus        65 ~~~~~~~~~~~~~t~v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~-~~~~n~~~p~~rD  143 (214)
T d1aoza3          65 IDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE-ESSLNLKNPPLRN  143 (214)
T ss_dssp             TTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGG-GGGSCCSSCCEES
T ss_pred             ccCCCCCcccccCceeEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccc-cccccccCCceec
Confidence            11122223345678899999999999999996542   2467999999999999999999888643 4578999999999


Q ss_pred             eEEeCCCcEEEEEEEecCceeEEEEecchhhHHccceEEEEEecCccccccCCCCCCCCCCC
Q 008066          518 TVGVPVGGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVENGVTELEKLEAPPPDYPVC  579 (579)
Q Consensus       518 Tv~vp~~g~v~irf~adnpG~wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~~~~~p~~~~~c  579 (579)
                      |+.|++++|++|||++||||.|+||||+++|++.|||++|.|.+     ++++.+|.++++|
T Consensus       144 Tv~v~~g~~~~ir~~adnpG~w~~HCH~~~H~~~GM~~~~~v~~-----~~~~~~P~~~~~c  200 (214)
T d1aoza3         144 TVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV-----EKVGRIPTKALAC  200 (214)
T ss_dssp             EEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG-----GGCCCCCHHHHSS
T ss_pred             CcccCCCceEEEEEecCCCeeEEEEECcHHHHhCcCcEEEEEcc-----ccccCCCcccccc
Confidence            99999999999999999999999999999999999999998743     4566788899988
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure