Citrus Sinensis ID: 008067

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------58
MRVALASTIKQNPLLLTISSFLYRPPTKTVSFRNIFTVNTTRNLGFLRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGLDEVWDLKPLVNGKDIMNVLQLKSGGPLVREWQQKLLAWQLAHPSGTAEECIDWMKETHLKRIKLQ
ccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHccccccccEEEEEcccccHHHHHHHHHHHHHccccccccEEEcccccccccCEEEEEEEEccEEEEEEccccccccccccccccccccHHHHHHcccccHHHHccccccccCCccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHcHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHccccccccHHHHHHHHccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccCCcccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcc
*******TIKQNPLLLTISSFLYRPP**********************************PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGLDEVWDLKPLVNGKDIMNVLQLKSGGPLVREWQQKLLAWQLAHPSGTAEECIDWMKETHLK*****
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MRVALASTIKQNPLLLTISSFLYRPPTKTVSFRNIFTVNTTRNLGFLRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGLDEVWDLKPLVNGKDIMNVLQLKSGGPLVREWQQKLLAWQLAHPSGTAEECIDWMKETHLKRIKLQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
CCA tRNA nucleotidyltransferase, mitochondrial This enzyme carries out synthesis of the tRNA CCA terminus without the direction of a template using the multiple accepting and donating subsites within its active site.probableQ9P4S5
CCA tRNA nucleotidyltransferase, mitochondrial This enzyme carries out synthesis of the tRNA CCA terminus without the direction of a template using the multiple accepting and donating subsites within its active site.probableP21269
Putative CCA tRNA nucleotidyltransferase 2 This enzyme carries out synthesis of the tRNA CCA terminus without the direction of a template using the multiple accepting and donating subsites within its active site.probableQ9Y7U9

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.7.-Nucleotidyltransferases.probable
2.7.7.25Transferred entry: 2.7.7.72.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3H38, chain A
Confidence level:very confident
Coverage over the Query: 70-379,392-575
View the alignment between query and template
View the model in PyMOL
Template: 1OU5, chain A
Confidence level:very confident
Coverage over the Query: 83-178,192-378,393-422,437-476,487-488,500-519
View the alignment between query and template
View the model in PyMOL