Citrus Sinensis ID: 008094

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------58
MGGENVQIEKSNNNSSSSSSPSASGPPPTCFSHFWSSALRAKTLTAPSVRTNDGEGLLRRLGLFELVLIGVGASVGAGIFVVTGTVARDAGPGVTISFLLAGAASVLNALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYVVSILELFPFFKENIPSWIGHGGEEFLGGTLSINILAPILLALLTIVLCWGVGESSVLNSCMTVVKVIIVIVVIFAGAFEVDVSNWSPFAPNGFKEILTGATVVFFAYVGFDAVANSAEESKKPQRDLPIGILGSLLICAALYVGVSLVLTGMVPYKFLDEDAPLSDAFASRGLKYVSVLISFGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHPKRHTPVHSQVWVGIVAGILAGLFNVRVLSHILSVGTLTGYSVVSACVIALRWKDRTSRNDSSRLTSAWRQGVICLIIIACCGFGAGLFYRINASYILLIVAVVIAVLASAMLCLRHGYSDPPGFSCPGVPLLPAVSIFFNLFLFAQLHYEAWWRFVILSFISIGLYAFYGQYHADPSSDTIVYHRVAVAEAQ
ccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccHHHHHHHccccEEcccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccEECcccccccccccHHHHHHHHHHHEEEccHHHHHHccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECcccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHEEccccccccccccHHccccHHHHc
*****************************CFSHFWSSALRAKTL*********GEGLLRRLGLFELVLIGVGASVGAGIFVVTGTVARDAGPGVTISFLLAGAASVLNALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYVVSILELFPFFKENIPSWIGHGGEEFLGGTLSINILAPILLALLTIVLCWGVGESSVLNSCMTVVKVIIVIVVIFAGAFEVDVSNWSPFAPNGFKEILTGATVVFFAYVGFDAVANSAEESKKPQRDLPIGILGSLLICAALYVGVSLVLTGMVPYKFLDEDAPLSDAFASRGLKYVSVLISFGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHPKRHTPVHSQVWVGIVAGILAGLFNVRVLSHILSVGTLTGYSVVSACVIALRWKDRTSRNDSSRLTSAWRQGVICLIIIACCGFGAGLFYRINASYILLIVAVVIAVLASAMLCLRHGYSDPPGFSCPGVPLLPAVSIFFNLFLFAQLHYEAWWRFVILSFISIGLYAFYGQYHADPSS**************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxHxxHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxx
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MGGENVQIEKSNNNSSSSSSPSASGPPPTCFSHFWSSALRAKTLTAPSVRTNDGEGLLRRLGLFELVLIGVGASVGAGIFVVTGTVARDAGPGVTISFLLAGAASVLNALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYVVSILELFPFFKENIPSWIGHGGEEFLGGTLSINILAPILLALLTIVLCWGVGESSVLNSCMTVVKVIIVIVVIFAGAFEVDVSNWSPFAPNGFKEILTGATVVFFAYVGFDAVANSAEESKKPQRDLPIGILGSLLICAALYVGVSLVLTGMVPYKFLDEDAPLSDAFASRGLKYVSVLISFGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHPKRHTPVHSQVWVGIVAGILAGLFNVRVLSHILSVGTLTGYSVVSACVIALRWKDRTSRNDSSRLTSAWRQGVICLIIIACCGFGAGLFYRINASYILLIVAVVIAVLASAMLCLRHGYSDPPGFSCPGVPLLPAVSIFFNLFLFAQLHYEAWWRFVILSFISIGLYAFYGQYHADPSSDTIVYHRVAVAEAQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cationic amino acid transporter 9, chloroplastic Permease involved in the transport of the cationic amino acids.confidentQ9C5D6
High affinity cationic amino acid transporter 1 High-affinity, low capacity permease involved in the transport of the cationic amino acids (arginine, lysine and ornithine) in non-hepatic tissues. May also function as an ecotropic retroviral leukemia receptor.probableQ09143
High affinity cationic amino acid transporter 1 High-affinity, low capacity permease involved in the transport of the cationic amino acids (arginine, lysine and ornithine) in non-hepatic tissues. May also function as an ecotropic retroviral leukemia receptor.probableP30825

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3L1L, chain A
Confidence level:very confident
Coverage over the Query: 58-176,193-443,510-563
View the alignment between query and template
View the model in PyMOL
Template: 2A65, chain A
Confidence level:probable
Coverage over the Query: 62-308
View the alignment between query and template
View the model in PyMOL