Citrus Sinensis ID: 008189
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 574 | 2.2.26 [Sep-21-2011] | |||||||
| P26792 | 592 | Beta-fructofuranosidase, | N/A | no | 0.977 | 0.947 | 0.726 | 0.0 | |
| Q39692 | 592 | Beta-fructofuranosidase, | N/A | no | 0.991 | 0.961 | 0.680 | 0.0 | |
| Q39693 | 583 | Beta-fructofuranosidase, | N/A | no | 0.968 | 0.953 | 0.690 | 0.0 | |
| Q8W413 | 591 | Beta-fructofuranosidase, | yes | no | 0.959 | 0.932 | 0.664 | 0.0 | |
| Q1PEF8 | 590 | Beta-fructofuranosidase, | no | no | 0.993 | 0.966 | 0.651 | 0.0 | |
| Q0JDC6 | 586 | Beta-fructofuranosidase, | yes | no | 0.939 | 0.919 | 0.614 | 0.0 | |
| Q01IS8 | 586 | Beta-fructofuranosidase, | N/A | no | 0.939 | 0.919 | 0.614 | 0.0 | |
| P49174 | 590 | Beta-fructofuranosidase, | N/A | no | 0.939 | 0.913 | 0.618 | 0.0 | |
| A2X5P7 | 577 | Beta-fructofuranosidase, | N/A | no | 0.916 | 0.911 | 0.632 | 0.0 | |
| Q0E0P0 | 577 | Beta-fructofuranosidase, | no | no | 0.916 | 0.911 | 0.632 | 0.0 |
| >sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1 OS=Daucus carota GN=INV1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/573 (72%), Positives = 472/573 (82%), Gaps = 12/573 (2%)
Query: 12 LIAYLWVISNN---NGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMY 65
L+A L V + NGVEA H+I+ QS+ A VKQ+HRT +HFQP ++WIN GPMY
Sbjct: 21 LLAILLVTTTTLHINGVEAFHEIHYNLQSVGAENVKQVHRTGYHFQPKQNWINDPNGPMY 80
Query: 66 YKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVL 125
YKG+YHLFYQYNPKGAVWGNIVWAHSVS DLINW LEPA++PSKPFD GC SGSAT+L
Sbjct: 81 YKGVYHLFYQYNPKGAVWGNIVWAHSVSTDLINWTPLEPAIFPSKPFDKYGCRSGSATIL 140
Query: 126 PGNKPIILYTGVDH---KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFR 182
PGNKP+ILYTG+ K QVQNYA+PAN SDPYLRKWIKPDNNP+V NA+AFR
Sbjct: 141 PGNKPVILYTGIVEGPPKNVQVQNYAIPANLSDPYLRKWIKPDNNPLVVANNGENATAFR 200
Query: 183 DPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFY 242
DPTTAW GHW+MLVGS+R RG+AYLYRS+DF+KWTKAKHPIHS ANTGMWECPDF+
Sbjct: 201 DPTTAWLDKSGHWKMLVGSKRNRRGIAYLYRSKDFIKWTKAKHPIHSQANTGMWECPDFF 260
Query: 243 PVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGL 302
PVS+ G NGLDTS G + K VLKVSLDLTRY+YYT+GTY DKDRY+PD SVDGW GL
Sbjct: 261 PVSLKGLNGLDTSVTGESVKHVLKVSLDLTRYEYYTVGTYLTDKDRYIPDNTSVDGWAGL 320
Query: 303 RYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQL 362
RYDYGNFYASKTFFD KNRRILWGWANESDST D+AKGWAG+Q IPR +WLD SGKQL
Sbjct: 321 RYDYGNFYASKTFFDPSKNRRILWGWANESDSTAHDVAKGWAGIQLIPRTLWLDPSGKQL 380
Query: 363 LQWPIEELETLRGKNVHISN-QELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPS 421
+QWPIEELETLRG V S Q+L KG VEVKG+TAAQADVEVTF SL K E FDP
Sbjct: 381 MQWPIEELETLRGSKVKFSRKQDLSKGILVEVKGITAAQADVEVTFSFKSLAKREPFDPK 440
Query: 422 WKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDAS 481
W DAE +C GS VQGGVGPFGLLTLAS+ LEE+TPVFFR+FK + H VLMCSDA+
Sbjct: 441 WLEYDAEKICSLKGSTVQGGVGPFGLLTLASEKLEEYTPVFFRVFKAQNTHKVLMCSDAT 500
Query: 482 SSTLKTEGLYKPSFAGFVNVDL-SDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAV 540
S+LK EGLY+PSFAGFV+VDL +DKK+SLRSLID+SVVESFGA GKTCI+SRVYPTLAV
Sbjct: 501 RSSLK-EGLYRPSFAGFVDVDLATDKKISLRSLIDNSVVESFGAKGKTCISSRVYPTLAV 559
Query: 541 FDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMN 573
+++AHLY FNNG+ET+TVE L+AWSMKKP++MN
Sbjct: 560 YENAHLYVFNNGSETITVENLDAWSMKKPLRMN 592
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May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|Q39692|INV2_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 2 OS=Daucus carota GN=INV2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/582 (68%), Positives = 472/582 (81%), Gaps = 13/582 (2%)
Query: 3 VPKFLSIFMLIAYLWVIS---NNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHW 59
V F S+ L A +++ S N GVEASH+++PE QS++AV V+ +HRT +HFQP KHW
Sbjct: 13 VTCFHSMLFLSAVVFIFSLDVNIRGVEASHQVFPELQSVSAVNVQLVHRTGYHFQPKKHW 72
Query: 60 IN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDING 116
IN GPMYYKG YHLFYQYNPKGAVWGNIVWAHS+SKDLINW ALEPA++PSKPFD G
Sbjct: 73 INDPNGPMYYKGFYHLFYQYNPKGAVWGNIVWAHSISKDLINWVALEPAIFPSKPFDKYG 132
Query: 117 CWSGSATVLPGNKPIILYTGV---DHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG 173
CWSGSATVLPG KP+I+YTG+ QVQN+AVPAN SDPYLR+WIKPDNNP+V
Sbjct: 133 CWSGSATVLPGGKPVIMYTGIVTPSPVNTQVQNFAVPANYSDPYLREWIKPDNNPIVRAR 192
Query: 174 PDVNASAFRDPTTAWWSNDG-HWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLAN 232
+ N+S+FRDPTTAW+ DG HW++LVGSRRKHRG+AYLYRSR+F+KWTKAKHP+HS
Sbjct: 193 SE-NSSSFRDPTTAWF--DGVHWKILVGSRRKHRGIAYLYRSRNFLKWTKAKHPLHSKDR 249
Query: 233 TGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPD 292
TGMWEC DFYPV+ G NGLDTS G + K VLKVSL TRY+YYT+G Y+RD D YVPD
Sbjct: 250 TGMWECLDFYPVAPKGMNGLDTSVTGQDIKHVLKVSLYSTRYEYYTVGEYDRDNDIYVPD 309
Query: 293 KDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPRE 352
SVDGW GLRYDYGNFYASKTFFD K RRILWGWANESDS DD+ KGWAG+Q IPR+
Sbjct: 310 NTSVDGWAGLRYDYGNFYASKTFFDPDKQRRILWGWANESDSKQDDVQKGWAGIQLIPRK 369
Query: 353 VWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSL 412
+WLD +GKQL+QWPIEE++ LRG+NVH+ +Q L G H+EVKGVTAAQADV+ TF SL
Sbjct: 370 LWLDPNGKQLIQWPIEEIQLLRGQNVHMGSQVLNTGEHIEVKGVTAAQADVDATFSFKSL 429
Query: 413 DKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKH 472
D+AE FDP+W LDA +C +GS V+GG+GPFG LTLAS+ LEE+TPVFFR+FK K
Sbjct: 430 DRAEWFDPNWAKLDALDVCDWMGSTVRGGLGPFGFLTLASEKLEEYTPVFFRVFKTKDKL 489
Query: 473 LVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITS 532
VLMCSDA S+ EGLYKP FAG+V+VDLSDKK+SLRSLID+SVVESFGA G+TCITS
Sbjct: 490 KVLMCSDAKRSSTTAEGLYKPPFAGYVDVDLSDKKISLRSLIDNSVVESFGAHGRTCITS 549
Query: 533 RVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMNS 574
RVYP +A++++AH++ FNNGTE +T++ L+AWSMK P MN+
Sbjct: 550 RVYPKIAIYNNAHVFVFNNGTEAITIDSLDAWSMKAPSLMNN 591
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May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39693|INV3_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Daucus carota GN=INV3 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/566 (69%), Positives = 464/566 (81%), Gaps = 10/566 (1%)
Query: 15 YLWVISNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYH 71
+ ++ N NGV+++H+++PE QS++AV VK +HRT +HFQP KHWIN GPM+YKG YH
Sbjct: 21 FSFIFLNINGVDSTHRVFPELQSISAVDVKLVHRTGYHFQPQKHWINDPNGPMFYKGYYH 80
Query: 72 LFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPI 131
LFYQYNPKG+VWGNIVWAHSVSKDLINW ALEPA++PSKPFD GCWSGSAT+LPGNKP+
Sbjct: 81 LFYQYNPKGSVWGNIVWAHSVSKDLINWIALEPAIFPSKPFDQYGCWSGSATILPGNKPV 140
Query: 132 ILYTGV---DHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAW 188
ILYTG+ D + QVQNYAVPAN SDP+LR+W+KPDNNP+V + N SAFRDPTTAW
Sbjct: 141 ILYTGIVSPDPENAQVQNYAVPANYSDPFLREWVKPDNNPLVGVHTE-NPSAFRDPTTAW 199
Query: 189 WSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISG 248
+ + GHW+MLVGS RKHRG+AYLYRS+DF KW ++ HPIH+ A TGMWECPDFYPVS
Sbjct: 200 F-DGGHWKMLVGSSRKHRGIAYLYRSKDFKKWKRSPHPIHTKAETGMWECPDFYPVSPRS 258
Query: 249 KNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN 308
++GLD S G K VLKVSL+ TRY+YYTIG YNR +D YVPD SVDGW GLRYDYGN
Sbjct: 259 EDGLDNSKMGRGIKHVLKVSLNSTRYEYYTIGRYNRVRDFYVPDNTSVDGWAGLRYDYGN 318
Query: 309 FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIE 368
FYASKTF+D K RRILWGWANESDS DD+ KGWAG+Q IPR +WLD SG+QL+QWPIE
Sbjct: 319 FYASKTFYDPIKKRRILWGWANESDSQIDDVQKGWAGIQLIPRRIWLDPSGRQLVQWPIE 378
Query: 369 ELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAE 428
E+E LRG +H+ NQ+L G HVEV G+TAAQADV+ TF SLDKAE FDP W NLDA+
Sbjct: 379 EVEGLRGSELHMRNQKLDMGVHVEVTGITAAQADVDATFSFKSLDKAESFDPEWINLDAQ 438
Query: 429 HLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFK-DGHKHLVLMCSDASSSTLKT 487
+C +GS +QGG+GPFGLLTLASK+LEE+TPVFFRIFK + K VLMCSDA S+L
Sbjct: 439 DVCDSMGSTIQGGLGPFGLLTLASKDLEEYTPVFFRIFKAEDQKLKVLMCSDAKRSSL-A 497
Query: 488 EGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLY 547
EGLYKPSF GFV+VDLSDKK+SLRSLID+SVVESFGA K I+SRVYPTLA++++AHL+
Sbjct: 498 EGLYKPSFRGFVDVDLSDKKISLRSLIDNSVVESFGAQRKNLISSRVYPTLAIYNNAHLF 557
Query: 548 AFNNGTETVTVEKLNAWSMKKPVKMN 573
FNNGTE +TV+ L+AWSM P +MN
Sbjct: 558 VFNNGTEPITVDNLDAWSMNSPSEMN 583
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May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q8W413|INV4_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV4 OS=Arabidopsis thaliana GN=CWINV4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/569 (66%), Positives = 455/569 (79%), Gaps = 18/569 (3%)
Query: 20 SNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQY 76
N G++A H+IY E QS + V LHR +FHFQPPKHWIN GP+YYKG+YHLFYQY
Sbjct: 22 QNIKGIDAFHQIYEELQSESVESVNHLHRPSFHFQPPKHWINDPNGPVYYKGLYHLFYQY 81
Query: 77 NPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTG 136
N KGAVWGNI+WAHSVSKDL+NWEALEPAL PSK FDI G WSGS T++PG PIILYTG
Sbjct: 82 NTKGAVWGNIIWAHSVSKDLVNWEALEPALSPSKWFDIGGTWSGSITIVPGKGPIILYTG 141
Query: 137 VDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWR 196
V+ E Q+QNYA+P +PSDPYLRKWIKPD+NP+ P +N SAFRDPTTAW+S DGHWR
Sbjct: 142 VNQNETQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYTMNGSAFRDPTTAWFSKDGHWR 201
Query: 197 MLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISG-KNGLDTS 255
+VGS+RK RG+AY+YRSRDF W KAKHP+HS +TGMWECPDF+PVS++ +NGLD
Sbjct: 202 TVVGSKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGMWECPDFFPVSLTDFRNGLDLD 261
Query: 256 FAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTF 315
+ G N K VLKVSLD+TRY+YYT+G Y+ KDRY+PD ++ DGW GLR+DYGNFYASKTF
Sbjct: 262 YVGPNTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGNTPDGWEGLRFDYGNFYASKTF 321
Query: 316 FDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRG 375
FD +KNRRILWGWANESD+ DD+ KGWAG+Q IPR V LD S KQL+ WP+EE+E+LRG
Sbjct: 322 FDYKKNRRILWGWANESDTVEDDILKGWAGLQVIPRTVLLDSSKKQLVFWPVEEIESLRG 381
Query: 376 KNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPS--WKNLDAEHLCGK 433
V ++N ++K G +EVKG+T AQADVEVTF + SL+KAE FDPS WK L+ LC
Sbjct: 382 NYVRMNNHDIKMGQRIEVKGITPAQADVEVTFYVGSLEKAEIFDPSFTWKPLE---LCNI 438
Query: 434 IGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKD--GHKHLVLMCSDASSSTLKTEG-- 489
GS V+GGVGPFGL+TLA+ +LEE+TPVFFR+F D HK VLMCSDA S+LK +
Sbjct: 439 KGSNVRGGVGPFGLITLATPDLEEYTPVFFRVFNDTKTHKPKVLMCSDARPSSLKQDTGL 498
Query: 490 -----LYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDA 544
+YKPSFAGFV+VD++D ++SLRSLIDHSVVESFGA GKT ITSRVYP AV ++A
Sbjct: 499 LAKDRMYKPSFAGFVDVDMADGRISLRSLIDHSVVESFGALGKTVITSRVYPVKAVKENA 558
Query: 545 HLYAFNNGTETVTVEKLNAWSMKKPVKMN 573
HLY FNNGT+TVT+E LNAW+M +P++MN
Sbjct: 559 HLYVFNNGTQTVTIESLNAWNMDRPLQMN 587
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q1PEF8|INV2_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV2 OS=Arabidopsis thaliana GN=CWINV2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/589 (65%), Positives = 463/589 (78%), Gaps = 19/589 (3%)
Query: 1 MEVPKFLSIFMLIAYLWVISNNNGVEASHKIYPEFQSLAAV--KVKQLHRTAFHFQPPKH 58
M PKF + +LI + + +NNGV+A HK++ + QS + V LHRTA+HFQPP+H
Sbjct: 1 MSAPKFGYVLLLIVLINI--SNNGVDAFHKVFKKLQSKSTSLESVSPLHRTAYHFQPPRH 58
Query: 59 WIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDIN 115
WIN PM YKG+YHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPA+YPSK FDIN
Sbjct: 59 WINDPNAPMLYKGVYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAIYPSKWFDIN 118
Query: 116 GCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPD 175
G WSGSAT +PG P+ILYTG+ + Q+QNYA+P + SDPYL+ WIKPD+NP+V P
Sbjct: 119 GTWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPDNG 178
Query: 176 VNASAFRDPTTAWWSN-DGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTG 234
N SAFRDPTTAW++ DG+WRMLVGS+RK+RG+AY+Y+SRDF KW K+K PIHS TG
Sbjct: 179 ENGSAFRDPTTAWFNKKDGYWRMLVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTG 238
Query: 235 MWECPDFYPVSISGK-NGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDK 293
MWECPDF+PVS++ K NGLD S+ G N K VLKVSLDLTRY+YYT+GTY+ KDRY PD
Sbjct: 239 MWECPDFFPVSVTDKKNGLDFSYDGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDG 298
Query: 294 DSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREV 353
+ DGW GLR+DYGN+YASKTFFD + NRRILWGWANESD+ DD KGWAG+Q IPR +
Sbjct: 299 YTPDGWDGLRFDYGNYYASKTFFDDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTI 358
Query: 354 WLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLD 413
LD SGKQL+ WPIEE+E+LRGKNV ++NQ+++ G EV+G+T AQ DV+VTF + +L+
Sbjct: 359 LLDSSGKQLVFWPIEEIESLRGKNVQMTNQKMEMGQRFEVQGITPAQVDVDVTFNVGNLE 418
Query: 414 KAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDG--HK 471
KAEKFD S+ E LC GS V GGVGPFGL+TLA+ +LEE+TPVFFR+FKD +K
Sbjct: 419 KAEKFDESFATKPLE-LCNLKGSNVNGGVGPFGLITLATSDLEEYTPVFFRVFKDAASNK 477
Query: 472 HLVLMCSDASSSTLK-------TEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGA 524
VLMCSDA S+LK E +YKPSFAGFV+V L D K+SLRSLIDHSVVESFGA
Sbjct: 478 PKVLMCSDAKPSSLKKDTGTDAKERMYKPSFAGFVDVGLLDGKISLRSLIDHSVVESFGA 537
Query: 525 GGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMN 573
GKT ITSRVYPT AV + AHL+ FNNG++ VTVE LNAW+M+KP+KMN
Sbjct: 538 KGKTVITSRVYPTKAVGEKAHLFVFNNGSQPVTVESLNAWNMQKPLKMN 586
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q0JDC6|INV3_ORYSJ Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Oryza sativa subsp. japonica GN=CIN3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/558 (61%), Positives = 427/558 (76%), Gaps = 19/558 (3%)
Query: 32 YPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVW 88
YPE QSL A V RT +HFQPPKHWIN GPMYYKG+YHLFYQYNPKGAVWGNI W
Sbjct: 31 YPELQSLEAKHVDGKLRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEW 90
Query: 89 AHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYA 148
AHSVS DLI+W ALEP +YPSK FD GCWSGSATVLP P+I+YTG+D ERQVQN A
Sbjct: 91 AHSVSTDLIDWTALEPGIYPSKTFDEKGCWSGSATVLPSGVPVIMYTGIDPDERQVQNVA 150
Query: 149 VPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGM 208
P N SDPYLR+W KPD NP++ P +NASAFRDPTTAW+ DGHWR+LVGS+ +G+
Sbjct: 151 YPVNLSDPYLREWYKPDYNPIINPDGGINASAFRDPTTAWYGPDGHWRLLVGSKVNMKGL 210
Query: 209 AYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISG-----KNGLDT-----SFAG 258
A LYRSRDF KW KA HP+HS A+TGMWECPDF+PV+++G + G+DT +
Sbjct: 211 AVLYRSRDFKKWVKAHHPLHS-AHTGMWECPDFFPVAVAGGSRHYRRGVDTAELHDAAVA 269
Query: 259 GNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDS 318
K+VLKVSLDLTRY+YYT+G Y+ DRYVPD D GLRYDYG+FYASK+F+D
Sbjct: 270 EEVKYVLKVSLDLTRYEYYTVGWYDHATDRYVPDAAFPDNDYGLRYDYGDFYASKSFYDP 329
Query: 319 RKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNV 378
K RRI+WGWANESD+ DD KGWAG+Q IPR++WL GKQL+QWP+EEL+ LR K+V
Sbjct: 330 AKRRRIVWGWANESDTVPDDRRKGWAGIQAIPRKLWLSADGKQLVQWPVEELKALRAKHV 389
Query: 379 HISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKV 438
+++++ +KKG++ EV G + Q+DV++ F + L KAE+FDP+W+ DAE LC K+GS V
Sbjct: 390 NVTDKVIKKGNYFEVTGFKSVQSDVDMAFAIKDLSKAEEFDPAWRT-DAEALCKKLGSDV 448
Query: 439 QGGVGPFGLLTLASKNLEEFTPVFFRIFK-DGHKHLVLMCSDASSSTLKTEGLYKPSFAG 497
GGVGPFGL LAS +L+E T VFFR+FK + H+VLMC+D + S+ +++ +Y+P+FAG
Sbjct: 449 DGGVGPFGLWALASGDLKERTAVFFRVFKANDSSHVVLMCNDPTRSSYESK-IYRPTFAG 507
Query: 498 FVNVDLS-DKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETV 556
FV+VD++ +K+++LR+LIDHSVVESFGA GKTCI +RVYP AV DDAHL+ FNNG V
Sbjct: 508 FVDVDIAKNKQIALRTLIDHSVVESFGARGKTCILTRVYPRKAVGDDAHLFVFNNGESDV 567
Query: 557 TVEKLNAWSMKKPVKMNS 574
V L+AW MK P KMN+
Sbjct: 568 KVTNLDAWEMKTP-KMNA 584
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q01IS8|INV3_ORYSI Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Oryza sativa subsp. indica GN=CIN3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/558 (61%), Positives = 427/558 (76%), Gaps = 19/558 (3%)
Query: 32 YPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVW 88
YPE QSL A V RT +HFQPPKHWIN GPMYYKG+YHLFYQYNPKGAVWGNI W
Sbjct: 31 YPELQSLEAKHVDGKLRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEW 90
Query: 89 AHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYA 148
AHSVS DLI+W ALEP +YPSK FD GCWSGSATVLP P+I+YTG+D ERQVQN A
Sbjct: 91 AHSVSTDLIDWTALEPGIYPSKTFDEKGCWSGSATVLPSGVPVIMYTGIDPDERQVQNVA 150
Query: 149 VPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGM 208
P N SDPYLR+W KPD NP++ P +NASAFRDPTTAW+ DGHWR+LVGS+ +G+
Sbjct: 151 YPVNLSDPYLREWYKPDYNPIINPDGGINASAFRDPTTAWYGPDGHWRLLVGSKVNMKGL 210
Query: 209 AYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISG-----KNGLDT-----SFAG 258
A LYRSRDF KW KA HP+HS A+TGMWECPDF+PV+++G + G+DT +
Sbjct: 211 AVLYRSRDFKKWVKAHHPLHS-AHTGMWECPDFFPVAVAGGSRHYRRGVDTAELHDAAVA 269
Query: 259 GNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDS 318
K+VLKVSLDLTRY+YYT+G Y+ DRYVPD D GLRYDYG+FYASK+F+D
Sbjct: 270 EEVKYVLKVSLDLTRYEYYTVGWYDHATDRYVPDAAFPDNDYGLRYDYGDFYASKSFYDP 329
Query: 319 RKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNV 378
K RRI+WGWANESD+ DD KGWAG+Q IPR++WL GKQL+QWP+EEL+ LR K+V
Sbjct: 330 AKRRRIVWGWANESDTVPDDRRKGWAGIQAIPRKLWLSADGKQLVQWPVEELKALRAKHV 389
Query: 379 HISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKV 438
+++++ +KKG++ EV G + Q+DV++ F + L KAE+FDP+W+ DAE LC K+GS V
Sbjct: 390 NVTDKVIKKGNYFEVTGFKSVQSDVDMAFAIKDLSKAEEFDPAWRT-DAEALCKKLGSDV 448
Query: 439 QGGVGPFGLLTLASKNLEEFTPVFFRIFK-DGHKHLVLMCSDASSSTLKTEGLYKPSFAG 497
GGVGPFGL LAS +L+E T VFFR+FK + H+VLMC+D + S+ +++ +Y+P+FAG
Sbjct: 449 DGGVGPFGLWALASGDLKERTAVFFRVFKANDSSHVVLMCNDPTRSSYESK-IYRPTFAG 507
Query: 498 FVNVDLS-DKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETV 556
FV+VD++ +K+++LR+LIDHSVVESFGA GKTCI +RVYP AV DDAHL+ FNNG V
Sbjct: 508 FVDVDIAKNKQIALRTLIDHSVVESFGARGKTCILTRVYPRKAVGDDAHLFVFNNGESDV 567
Query: 557 TVEKLNAWSMKKPVKMNS 574
V L+AW MK P KMN+
Sbjct: 568 KVTNLDAWEMKTP-KMNA 584
|
Oryza sativa subsp. indica (taxid: 39946) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P49174|INVA_MAIZE Beta-fructofuranosidase, cell wall isozyme OS=Zea mays PE=2 SV=1 | Back alignment and function description |
|---|
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/564 (61%), Positives = 413/564 (73%), Gaps = 25/564 (4%)
Query: 27 ASHKIYPEFQSLAAVKV-----KQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNP 78
ASH I+ ++ AA V L RT +HFQPP +WIN P+YYKG YHLFYQYNP
Sbjct: 28 ASHVIHRSLEAEAAPSVPASIVSPLLRTGYHFQPPMNWINDPNAPLYYKGWYHLFYQYNP 87
Query: 79 KGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVD 138
KGAVWGNIVWAHSVS+DLINW ALEPA+YPS P D GCWSGSAT+L P ILYTG+D
Sbjct: 88 KGAVWGNIVWAHSVSRDLINWVALEPAIYPSIPSDKYGCWSGSATILEDGTPAILYTGID 147
Query: 139 HKE--RQVQNYAVPANPSDPYLRKWIKPDN-NPVVFPGPD-VNASAFRDPTTAWWSNDGH 194
+ QVQ A+P + SDP LR+W KP+ NPV P +NA+ FRDPTTAW + GH
Sbjct: 148 RADINYQVQVLALPKDASDPLLREWEKPEEYNPVATPAAGGINATQFRDPTTAW-RHAGH 206
Query: 195 WRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISG-KNGLD 253
WRMLVGS R RGMA +YRSRDF KWTKAKHP+HS A TGMWECPDF+PVS G + GLD
Sbjct: 207 WRMLVGSVRGARGMALVYRSRDFRKWTKAKHPLHSAALTGMWECPDFFPVSGPGLQAGLD 266
Query: 254 TSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASK 313
TS G K+VLK SLDLTRYDYYTIG+Y+ KDRY PD + D RYDYGN+YASK
Sbjct: 267 TSAPG--TKYVLKSSLDLTRYDYYTIGSYDGGKDRYYPDDPAGDYHHRRRYDYGNYYASK 324
Query: 314 TFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETL 373
TF+D + RR+L GWANESDS DD AKGWAG+ IPR++WLD +GKQLLQWPI E+E L
Sbjct: 325 TFYDPVERRRVLLGWANESDSVPDDKAKGWAGIHAIPRKIWLDPTGKQLLQWPIHEVEKL 384
Query: 374 RGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKL------PSLDKAEKFDPSWKNLDA 427
RGK V + + +K G H EV G+ QADVEV+F+L L+KAE FDP++ + DA
Sbjct: 385 RGKAVSVDAKLVKPGDHFEVTGIATYQADVEVSFELELEAGTSLLEKAEAFDPAYDD-DA 443
Query: 428 EHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGH-KHLVLMCSDASSSTLK 486
+ LCG G+ +GGVGPFGL LAS +L+E T VFFR+F+DGH K VLMC+D + S+L
Sbjct: 444 QKLCGVKGADARGGVGPFGLWVLASADLQERTAVFFRVFRDGHGKPKVLMCTDPTKSSLS 503
Query: 487 TEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHL 546
+ LYKP+FAGFV+ D+S K++LRSLID SVVESFGAGGKTCI SRVYP++AV DAHL
Sbjct: 504 PD-LYKPTFAGFVDADISSGKITLRSLIDRSVVESFGAGGKTCILSRVYPSIAVGKDAHL 562
Query: 547 YAFNNGTETVTVEKLNAWSMKKPV 570
Y FNNG VTV L AW MKKP+
Sbjct: 563 YVFNNGEVDVTVSGLTAWEMKKPL 586
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|A2X5P7|INV1_ORYSI Beta-fructofuranosidase, insoluble isoenzyme 1 OS=Oryza sativa subsp. indica GN=CIN1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/544 (63%), Positives = 406/544 (74%), Gaps = 18/544 (3%)
Query: 37 SLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVS 93
S+ A V L RT +HFQPP +WIN GP+YYKG YHLFYQYNPKGAVWGNIVWAHSVS
Sbjct: 38 SVPASIVSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNIVWAHSVS 97
Query: 94 KDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKE--RQVQNYAVPA 151
+DLINW ALEPA+ P P D GCWSGSAT+LP P ILYTG+D QVQN A P
Sbjct: 98 QDLINWIALEPAIKPDIPSDQYGCWSGSATILPDGTPAILYTGIDRPNINYQVQNIAFPK 157
Query: 152 NPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAY 210
N SDP LR+W+KP NPV P P +NA+ FRDPTTAW++ DGHWRMLVG + RG+AY
Sbjct: 158 NASDPLLREWVKPAYNPVATPEPGMNATQFRDPTTAWYA-DGHWRMLVGGLKGARRGLAY 216
Query: 211 LYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISG-KNGLDTSFAGGNEKFVLKVSL 269
LYRSRDF W +AKHP+HS A TGMWECPDF+P+ G + GLDTS + K+VLK SL
Sbjct: 217 LYRSRDFKTWVRAKHPLHS-ALTGMWECPDFFPLQAPGLQAGLDTSVP--SSKYVLKNSL 273
Query: 270 DLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWA 329
DLTRYDYYT+G YN+ +RYVPD + D R LRYDYGNFYASKTFFD K+RRIL GWA
Sbjct: 274 DLTRYDYYTVGIYNKVTERYVPDNPAGDYHR-LRYDYGNFYASKTFFDPVKHRRILLGWA 332
Query: 330 NESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGH 389
NESDS D AKGWAG+ IPR+VWLD SGKQLLQWPIEELE LRGK+V +S++ +K G
Sbjct: 333 NESDSVTYDKAKGWAGIHAIPRKVWLDPSGKQLLQWPIEELEKLRGKSVSVSDKVVKPGE 392
Query: 390 HVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLT 449
H +V G+ QADVEV+ ++ L+KAE DP++ + DAE LCG G+ V+GGV FGL
Sbjct: 393 HFQVTGLGTYQADVEVSLEVSGLEKAEALDPAFGD-DAERLCGAKGADVRGGV-VFGLWV 450
Query: 450 LASKNLEEFTPVFFRIFK---DGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDK 506
LAS LEE T VFFR+FK G K +VLMC+D + S+L + LYKP+FAGFV+ D+S
Sbjct: 451 LASAGLEEKTAVFFRVFKPAGHGAKPVVLMCTDPTKSSLSPD-LYKPTFAGFVDTDISSG 509
Query: 507 KLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSM 566
K+SLRSLID SVVESFGAGGKTCI SRVYP++A+ D AHLY FNNG + + L AW M
Sbjct: 510 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGDKAHLYVFNNGEADIKISHLKAWEM 569
Query: 567 KKPV 570
KKP+
Sbjct: 570 KKPL 573
|
May play a role in sucrose partitioning during seed development and in stress response. Oryza sativa subsp. indica (taxid: 39946) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q0E0P0|INV1_ORYSJ Beta-fructofuranosidase, insoluble isoenzyme 1 OS=Oryza sativa subsp. japonica GN=CIN1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/544 (63%), Positives = 406/544 (74%), Gaps = 18/544 (3%)
Query: 37 SLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVS 93
S+ A V L RT +HFQPP +WIN GP+YYKG YHLFYQYNPKGAVWGNIVWAHSVS
Sbjct: 38 SVPASIVSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNIVWAHSVS 97
Query: 94 KDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKE--RQVQNYAVPA 151
+DLINW ALEPA+ P P D GCWSGSAT+LP P ILYTG+D QVQN A P
Sbjct: 98 QDLINWIALEPAIKPDIPSDQYGCWSGSATILPDGTPAILYTGIDRPNINYQVQNIAFPK 157
Query: 152 NPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHR-GMAY 210
N SDP LR+W+KP NPV P P +NA+ FRDPTTAW++ DGHWRMLVG + R G+AY
Sbjct: 158 NASDPLLREWVKPAYNPVATPEPGMNATQFRDPTTAWYA-DGHWRMLVGGLKGARLGLAY 216
Query: 211 LYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISG-KNGLDTSFAGGNEKFVLKVSL 269
LYRSRDF W +AKHP+HS A TGMWECPDF+P+ G + GLDTS + K+VLK SL
Sbjct: 217 LYRSRDFKTWVRAKHPLHS-ALTGMWECPDFFPLQAPGLQAGLDTSVP--SSKYVLKNSL 273
Query: 270 DLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWA 329
DLTRYDYYT+G YN+ +RYVPD + D R LRYDYGNFYASKTFFD K+RRIL GWA
Sbjct: 274 DLTRYDYYTVGIYNKVTERYVPDNPAGDYHR-LRYDYGNFYASKTFFDPVKHRRILLGWA 332
Query: 330 NESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGH 389
NESDS D AKGWAG+ IPR+VWLD SGKQLLQWPIEELETLRGK+V + ++ +K G
Sbjct: 333 NESDSVTYDKAKGWAGIHAIPRKVWLDPSGKQLLQWPIEELETLRGKSVSVFDKVVKPGE 392
Query: 390 HVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLT 449
H +V G+ QADVEV+ ++ L+KAE DP++ + DAE LCG G+ V+GGV FGL
Sbjct: 393 HFQVTGLGTYQADVEVSLEVSGLEKAEALDPAFGD-DAERLCGAKGADVRGGV-VFGLWV 450
Query: 450 LASKNLEEFTPVFFRIFK---DGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDK 506
LAS LEE T VFFR+FK G K +VLMC+D + S+L + LYKP+FAGFV+ D+S
Sbjct: 451 LASAGLEEKTAVFFRVFKPAGHGAKPVVLMCTDPTKSSLSPD-LYKPTFAGFVDTDISSG 509
Query: 507 KLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSM 566
K+SLRSLID SVVESFGAGGKTCI SRVYP++A+ D AHLY FNNG + + L AW M
Sbjct: 510 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGDKAHLYVFNNGEADIKISHLKAWEM 569
Query: 567 KKPV 570
KKP+
Sbjct: 570 KKPL 573
|
May play a role in sucrose partitioning during seed development and in stress response. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 574 | ||||||
| 404435527 | 575 | cell wall invertase [Manihot esculenta] | 0.989 | 0.987 | 0.722 | 0.0 | |
| 255578969 | 578 | Beta-fructofuranosidase, insoluble isoen | 0.991 | 0.984 | 0.726 | 0.0 | |
| 166079160 | 584 | cell-wall invertase [Populus alba x Popu | 0.980 | 0.964 | 0.735 | 0.0 | |
| 384371324 | 575 | cell wall invertase [Manihot esculenta] | 0.982 | 0.980 | 0.705 | 0.0 | |
| 224091965 | 578 | predicted protein [Populus trichocarpa] | 0.954 | 0.948 | 0.738 | 0.0 | |
| 18324 | 592 | beta-fructofuranosidase [Daucus carota] | 0.977 | 0.947 | 0.727 | 0.0 | |
| 449462946 | 576 | PREDICTED: beta-fructofuranosidase, inso | 0.991 | 0.987 | 0.713 | 0.0 | |
| 404435525 | 576 | cell wall invertase [Manihot esculenta] | 0.987 | 0.984 | 0.708 | 0.0 | |
| 124712 | 592 | RecName: Full=Beta-fructofuranosidase, i | 0.977 | 0.947 | 0.726 | 0.0 | |
| 224140089 | 566 | predicted protein [Populus trichocarpa] | 0.951 | 0.964 | 0.733 | 0.0 |
| >gi|404435527|gb|AFR69123.1| cell wall invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/577 (72%), Positives = 486/577 (84%), Gaps = 9/577 (1%)
Query: 1 MEVPKFLSIFMLIAYLWVISNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWI 60
M PK L++ + +L + NN V SHKIYP++Q+L KV Q+HRT +HFQPP +WI
Sbjct: 1 MVAPKLLAV---LGFLLALCNNGCVLGSHKIYPQYQNLKVHKVNQVHRTGYHFQPPMNWI 57
Query: 61 N---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGC 117
N GPMYYKG+YHLFYQYNPKG VWGNIVWAHSVSKDLINWEAL+ A+YPSK FDINGC
Sbjct: 58 NDPNGPMYYKGLYHLFYQYNPKGVVWGNIVWAHSVSKDLINWEALDHAIYPSKWFDINGC 117
Query: 118 WSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVN 177
WSGSAT+LPGNKP+ILYTG+D K+RQVQNYAVP N +DPYLR+W+KPD+NP+V P VN
Sbjct: 118 WSGSATILPGNKPMILYTGIDPKQRQVQNYAVPKNLTDPYLREWVKPDDNPIVDPDNTVN 177
Query: 178 ASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWE 237
ASAFRDPTTAWW+ DGHWR+LVGS+RKHRG+AYLYRSRDF +W KAKHP+HS TGMWE
Sbjct: 178 ASAFRDPTTAWWA-DGHWRILVGSKRKHRGIAYLYRSRDFKQWVKAKHPLHSSPKTGMWE 236
Query: 238 CPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVD 297
CPDF+PVS+SG+NGL+TS G N K VLKVSLDLTRY+YYT+GTY++ KDRY PD SVD
Sbjct: 237 CPDFFPVSLSGQNGLETSVVGQNVKHVLKVSLDLTRYEYYTVGTYDKKKDRYTPDNTSVD 296
Query: 298 GWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDG 357
GW GLR+DYGNFYASKTFFD KNRRILWGWANESDS DDM KGWAG+Q IPR + LD
Sbjct: 297 GWGGLRFDYGNFYASKTFFDPSKNRRILWGWANESDSVKDDMQKGWAGIQAIPRRISLDA 356
Query: 358 SGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEK 417
S KQ++QWP+EELETLRG+ V ++NQ+L++G H EVKG+TA QADV+VTF PSLDKAE
Sbjct: 357 SRKQVIQWPVEELETLRGQKVQLNNQKLQQGEHFEVKGITAVQADVDVTFSFPSLDKAEP 416
Query: 418 FDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMC 477
FDP W LDA +C + GSK QGG+GPFGLLTLAS+NLEEFTPVFFRIFK KH+VL+C
Sbjct: 417 FDPKWAELDALDVCAQKGSKAQGGLGPFGLLTLASENLEEFTPVFFRIFKAPTKHVVLLC 476
Query: 478 SDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPT 537
SDA+SS+L GLYKPSFAGFV+VDL+ K+LSLRSLIDHSVVE+FGAGGK I SRVYP
Sbjct: 477 SDATSSSL-GNGLYKPSFAGFVDVDLTKKQLSLRSLIDHSVVETFGAGGKIVILSRVYPK 535
Query: 538 LAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMNS 574
L VFD AHL+ FNNG+ET+TVE LNAWSMK+P+ MN+
Sbjct: 536 LGVFDKAHLFVFNNGSETITVENLNAWSMKQPL-MNA 571
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255578969|ref|XP_002530337.1| Beta-fructofuranosidase, insoluble isoenzyme 3 precursor, putative [Ricinus communis] gi|223530141|gb|EEF32053.1| Beta-fructofuranosidase, insoluble isoenzyme 3 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/577 (72%), Positives = 494/577 (85%), Gaps = 8/577 (1%)
Query: 1 MEVPKFLSIFMLIAYLWVISNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWI 60
M V +F+S + +A+++ ++ + VE SH+IYPE+QSL A VK +HRT FHFQPPKHWI
Sbjct: 3 MGVFRFVSA-ICVAFVF-LAITSSVEGSHRIYPEYQSLQANNVKLVHRTGFHFQPPKHWI 60
Query: 61 N---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGC 117
N GPMYY G+YHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPA+YPS+ FDINGC
Sbjct: 61 NDPNGPMYYNGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAIYPSEWFDINGC 120
Query: 118 WSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVN 177
WSGSAT+LPGNKP+ILYTG+D K+RQ+QNYA+P N SDPYLR+W+KP +NPVV P VN
Sbjct: 121 WSGSATILPGNKPVILYTGIDPKQRQIQNYAIPKNLSDPYLREWVKPKDNPVVDPDSKVN 180
Query: 178 ASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWE 237
ASAFRDPTTAW++ DGHWR+LVGS+RKHRG+AYLYRS++F KW KA+HP+HS A TGMWE
Sbjct: 181 ASAFRDPTTAWYA-DGHWRILVGSKRKHRGIAYLYRSKNFKKWVKAEHPLHSKAKTGMWE 239
Query: 238 CPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVD 297
CPDF+PVS+SG+NGLDTS N K VLKVSLDLTRY+YYT+GTY++ KDRY PD + VD
Sbjct: 240 CPDFFPVSLSGENGLDTSVINQNVKHVLKVSLDLTRYEYYTLGTYDKRKDRYYPDSNLVD 299
Query: 298 GWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDG 357
GW GLRYDYGNFYASKTFFD KNRRILWGWANESD+ DD KGWAG+Q IPR++WLD
Sbjct: 300 GWGGLRYDYGNFYASKTFFDPSKNRRILWGWANESDAIQDDKNKGWAGIQLIPRKLWLDP 359
Query: 358 SGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEK 417
SG QL+QWPIEELE+LRG++V ++++++KKG HVEVKG+TAAQADV+VTF SLDKAE
Sbjct: 360 SGNQLIQWPIEELESLRGQSVQLTSKQIKKGEHVEVKGITAAQADVDVTFSFASLDKAEP 419
Query: 418 FDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMC 477
FDP W+NL A+ +C GSK QGG+GPFGLLTLAS+NLEEF PVFFR+FK K+ VL+C
Sbjct: 420 FDPKWENLVAQDVCAAKGSKAQGGLGPFGLLTLASENLEEFNPVFFRVFKASDKYKVLLC 479
Query: 478 SDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPT 537
SDA SS+L + GLYKPSF+GFV+VDL+DKKLSLRSLIDHSVVESFGA GKT +TSRVYPT
Sbjct: 480 SDARSSSLGS-GLYKPSFSGFVDVDLADKKLSLRSLIDHSVVESFGAKGKTVVTSRVYPT 538
Query: 538 LAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMNS 574
+AVFD AHL+ FNNG+ETVTVE L AW M KPV MNS
Sbjct: 539 IAVFDKAHLFVFNNGSETVTVETLKAWRMNKPV-MNS 574
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|166079160|gb|ABY81288.1| cell-wall invertase [Populus alba x Populus grandidentata] | Back alignment and taxonomy information |
|---|
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/570 (73%), Positives = 479/570 (84%), Gaps = 7/570 (1%)
Query: 5 KFLSIFMLIAYLWVISNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN--- 61
KFL + L A L+V+SNN GVEASHKIY +QSL+ KVKQ+HRT +HFQPPK+WIN
Sbjct: 11 KFLPVLPLFALLFVLSNN-GVEASHKIYLRYQSLSVDKVKQIHRTGYHFQPPKNWINDPN 69
Query: 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGS 121
GP+YYKG+YHLFYQYNPKGAVWGNIVWAHSVSKDLINWE+LEPA+YPSK FD GCWSGS
Sbjct: 70 GPLYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINWESLEPAIYPSKWFDNYGCWSGS 129
Query: 122 ATVLPGNKPIILYTG-VDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASA 180
AT+LP +P+I YTG VD RQ+QNYAVPAN SDPYLR+W+KPD+NP+V+P P VNASA
Sbjct: 130 ATILPNGEPVIFYTGIVDGNNRQIQNYAVPANSSDPYLREWVKPDDNPIVYPDPSVNASA 189
Query: 181 FRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPD 240
FRDPTTAW GHWR+L+GS+++ RG+AYLYRS DF KW KAKHP+HS+ TGMWECPD
Sbjct: 190 FRDPTTAW-RVGGHWRILIGSKKRDRGIAYLYRSLDFKKWFKAKHPLHSVQGTGMWECPD 248
Query: 241 FYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWR 300
F+PVS+SG+ GLDTS G N + VLKVSLDLTRY+YYTIGTY+ KDRY PD+ VDGW
Sbjct: 249 FFPVSLSGEEGLDTSVGGSNVRHVLKVSLDLTRYEYYTIGTYDEKKDRYYPDEALVDGWA 308
Query: 301 GLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGK 360
GLRYDYGNFYASKTFFD KNRRILWGWANESDS DM KGWAG+Q IPR VWLD SGK
Sbjct: 309 GLRYDYGNFYASKTFFDPSKNRRILWGWANESDSVQQDMNKGWAGIQLIPRRVWLDPSGK 368
Query: 361 QLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDP 420
QLLQWP+ ELE LR NV + NQ+L +G+HVEVKG+TAAQADV+VTF PSLDKAE FDP
Sbjct: 369 QLLQWPVAELEKLRSHNVQLRNQKLYQGYHVEVKGITAAQADVDVTFSFPSLDKAEPFDP 428
Query: 421 SWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDA 480
W LDA +C + GSK QGG+GPFGLLTLAS+ LEEFTPVFFR+FK KH VL+CSDA
Sbjct: 429 KWAKLDALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAADKHKVLLCSDA 488
Query: 481 SSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAV 540
SS+L EGLYKP FAGFV+VDL+DKKL+LRSLIDHSVVESFGAGG+T ITSRVYP +AV
Sbjct: 489 RSSSL-GEGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRTVITSRVYPIIAV 547
Query: 541 FDDAHLYAFNNGTETVTVEKLNAWSMKKPV 570
F+ AHL+ FNNG+ETVTVE L+AWSMK PV
Sbjct: 548 FEKAHLFVFNNGSETVTVESLDAWSMKMPV 577
|
Source: Populus alba x Populus grandidentata Species: Populus alba x Populus grandidentata Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|384371324|gb|AFH77951.1| cell wall invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/573 (70%), Positives = 479/573 (83%), Gaps = 9/573 (1%)
Query: 1 MEVPKFLSIFMLIAYLWVISNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWI 60
M V KFL++F L+ ++ NNGVE SHKIY ++Q++ AVKV +HRT +HFQPP +WI
Sbjct: 1 MAVSKFLAVFGLL----LVFCNNGVEGSHKIYAQYQNVKAVKVNPVHRTGYHFQPPMNWI 56
Query: 61 N---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGC 117
N GPMYYKG+YHLFYQYNP GA WGNIVWAHSVSKDL+NW+AL+ ALYPSK FDINGC
Sbjct: 57 NDPNGPMYYKGLYHLFYQYNPNGATWGNIVWAHSVSKDLVNWQALKHALYPSKWFDINGC 116
Query: 118 WSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVN 177
WSGS T+LPGNKP+ILYTG+D +R++QNYAVP N SDPYLR WIKPD+NP+V P +VN
Sbjct: 117 WSGSVTILPGNKPVILYTGIDPNDREIQNYAVPKNLSDPYLRDWIKPDDNPMVDPDSNVN 176
Query: 178 ASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWE 237
ASAFRDPTTAWW DGHW+++VGSRR HRGMAYLYRSRDF W KAKHP+HS+ TG WE
Sbjct: 177 ASAFRDPTTAWWV-DGHWKIVVGSRRHHRGMAYLYRSRDFKTWIKAKHPLHSVPRTGNWE 235
Query: 238 CPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVD 297
CPDF+PVS+SG+NGLDTS G N K V KVSLD+TRYDYYT+GTY+R +D+Y+PD SVD
Sbjct: 236 CPDFFPVSLSGQNGLDTSVVGQNVKHVFKVSLDITRYDYYTVGTYDRTRDKYIPDNTSVD 295
Query: 298 GWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDG 357
GW GLR+DYGNFYASK+FFD K+RR+LWGW NESD+ DD +KGWAG+Q +PR++WLD
Sbjct: 296 GWAGLRFDYGNFYASKSFFDPSKSRRVLWGWVNESDTAADDNSKGWAGIQGVPRKIWLDS 355
Query: 358 SGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEK 417
S +Q++QWP+EELETLR K + + Q+LKKG VEVK +TA QADVEVTF PSL+KAE
Sbjct: 356 SKRQVVQWPVEELETLRRKKIELGIQKLKKGEKVEVKRITATQADVEVTFSFPSLEKAEP 415
Query: 418 FDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMC 477
FD W N+DA+ +C + GS QGG+GPFGLLTLASK LEEFTPVFFR+FK G++H VL+C
Sbjct: 416 FDHKWANIDAQGVCAEKGSTDQGGLGPFGLLTLASKELEEFTPVFFRVFKAGNRHKVLLC 475
Query: 478 SDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPT 537
SDA SS+L+ EGLYKPSFAGFV+VDLS K+LSLRSLIDHSVV SFG GGKT ITSRVYPT
Sbjct: 476 SDARSSSLR-EGLYKPSFAGFVDVDLSTKRLSLRSLIDHSVVSSFGEGGKTVITSRVYPT 534
Query: 538 LAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPV 570
LAVF AHL+ FNNG+ET+TVEK NAWSMK P+
Sbjct: 535 LAVFHKAHLFVFNNGSETITVEKFNAWSMKNPI 567
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091965|ref|XP_002309419.1| predicted protein [Populus trichocarpa] gi|222855395|gb|EEE92942.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/554 (73%), Positives = 465/554 (83%), Gaps = 6/554 (1%)
Query: 21 NNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYN 77
+NNGVEASHKIY +QSL+ KVKQ HRT +HFQPPK+WIN GP+YYKG+YHLFYQYN
Sbjct: 20 SNNGVEASHKIYLRYQSLSVDKVKQTHRTGYHFQPPKNWINDPNGPLYYKGLYHLFYQYN 79
Query: 78 PKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTG- 136
PKGAVWGNIVWAHSVSKDLINWE+LEPA+YPSK FD GCWSGSAT+LP +P+I YTG
Sbjct: 80 PKGAVWGNIVWAHSVSKDLINWESLEPAIYPSKWFDNYGCWSGSATILPNGEPVIFYTGI 139
Query: 137 VDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWR 196
VD RQ+QNYAVPAN SDPYLR+W+KPD+NP+V+P P VNASAFRDPTTAW DGHWR
Sbjct: 140 VDENNRQIQNYAVPANSSDPYLREWVKPDDNPIVYPDPSVNASAFRDPTTAW-RVDGHWR 198
Query: 197 MLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSF 256
+L+GS+++ RG+AYLYRS DF KW KAKHP+HS+ TGMWECPDF+PVS+S ++GLDTS
Sbjct: 199 ILIGSKKRDRGIAYLYRSLDFKKWFKAKHPLHSVQGTGMWECPDFFPVSLSSEDGLDTSV 258
Query: 257 AGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFF 316
G N + VLKVSLDLTRY+YYTIGTY+ KDRY PD+ VDGW GLRYD GNFYASKTFF
Sbjct: 259 GGSNVRHVLKVSLDLTRYEYYTIGTYDEKKDRYYPDEALVDGWAGLRYDCGNFYASKTFF 318
Query: 317 DSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGK 376
D NRRILWGWANESDS D KGWAG+Q IPR VWLD SGKQLLQWP+ ELE LR
Sbjct: 319 DPSTNRRILWGWANESDSVQQDKNKGWAGIQLIPRRVWLDPSGKQLLQWPVAELEKLRSH 378
Query: 377 NVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGS 436
NV + NQ+L +G+HVEVKG+TAAQADV+VTF PSLDKAE FDP W LDA +C + GS
Sbjct: 379 NVQLRNQKLYQGYHVEVKGITAAQADVDVTFSFPSLDKAEPFDPKWAKLDALDVCAQKGS 438
Query: 437 KVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFA 496
K QGG+GPFGLLTLAS+ LEEFTPVFFR+FK KH VL+CSDA SS+L GLYKP FA
Sbjct: 439 KAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAADKHKVLLCSDARSSSLGV-GLYKPPFA 497
Query: 497 GFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETV 556
GFV+VDL+DKKL+LRSLIDHSVVESFGAGG+T ITSRVYP +AVFD AHL+ FNNG+ETV
Sbjct: 498 GFVDVDLTDKKLTLRSLIDHSVVESFGAGGRTVITSRVYPIIAVFDKAHLFVFNNGSETV 557
Query: 557 TVEKLNAWSMKKPV 570
TVE LNAWSMK PV
Sbjct: 558 TVETLNAWSMKVPV 571
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18324|emb|CAA49162.1| beta-fructofuranosidase [Daucus carota] | Back alignment and taxonomy information |
|---|
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/573 (72%), Positives = 473/573 (82%), Gaps = 12/573 (2%)
Query: 12 LIAYLWVISNN---NGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMY 65
L+A L V + NGVEA H+I+ QS+ A VKQ+HRT +HFQP ++WIN GPMY
Sbjct: 21 LLAILLVTTTTLHINGVEAFHEIHYNLQSVGAENVKQVHRTGYHFQPKQNWINDPNGPMY 80
Query: 66 YKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVL 125
YKG+YHLFYQYNPKGAVWGNIVWAHSVS DLINW LEPA++PSKPFD GCWSGSAT+L
Sbjct: 81 YKGVYHLFYQYNPKGAVWGNIVWAHSVSTDLINWTPLEPAIFPSKPFDKYGCWSGSATIL 140
Query: 126 PGNKPIILYTGVDH---KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFR 182
PGNKP+ILYTG+ K QVQNYA+PAN SDPYLRKWIKPDNNP+V NA+AFR
Sbjct: 141 PGNKPVILYTGIVEGPPKNVQVQNYAIPANLSDPYLRKWIKPDNNPLVVANNGENATAFR 200
Query: 183 DPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFY 242
DPTTAW GHW+MLVGS+R RG+AYLYRS+DF+KWTKAKHPIHS ANTGMWECPDF+
Sbjct: 201 DPTTAWLDKSGHWKMLVGSKRNRRGIAYLYRSKDFIKWTKAKHPIHSQANTGMWECPDFF 260
Query: 243 PVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGL 302
PVS+ G NGLDTS G + K VLKVSLDLTRY+YYT+GTY DKDRY+PD SVDGW GL
Sbjct: 261 PVSLKGLNGLDTSVTGESVKHVLKVSLDLTRYEYYTVGTYLTDKDRYIPDNTSVDGWAGL 320
Query: 303 RYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQL 362
RYDYGNFYASKTFFD KNRRILWGWANESDST D+AKGWAG+Q IPR +WLD SGKQL
Sbjct: 321 RYDYGNFYASKTFFDPSKNRRILWGWANESDSTAHDVAKGWAGIQLIPRTLWLDPSGKQL 380
Query: 363 LQWPIEELETLRGKNVHISN-QELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPS 421
+QWPIEELETLRG V S Q+L KG VEVKG+TAAQADVEVTF SL K E FDP
Sbjct: 381 MQWPIEELETLRGSKVKFSRKQDLSKGILVEVKGITAAQADVEVTFSFKSLAKREPFDPK 440
Query: 422 WKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDAS 481
W DAE +C GS VQGGVGPFGLLTLAS+ LEE+TPVFFR+FK + H VLMCSDA+
Sbjct: 441 WLEYDAEKICSLKGSTVQGGVGPFGLLTLASEKLEEYTPVFFRVFKVQNTHKVLMCSDAT 500
Query: 482 SSTLKTEGLYKPSFAGFVNVDL-SDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAV 540
S+LK EGLY+PSFAGFV+VDL +DKK+SLRSLID+SVVESFGA GKTCI+SRVYPTLAV
Sbjct: 501 RSSLK-EGLYRPSFAGFVDVDLATDKKISLRSLIDNSVVESFGAKGKTCISSRVYPTLAV 559
Query: 541 FDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMN 573
+++AHLY FNNG+ET+TVE L+AWSMKKP++MN
Sbjct: 560 YENAHLYVFNNGSETITVENLDAWSMKKPLRMN 592
|
Source: Daucus carota Species: Daucus carota Genus: Daucus Family: Apiaceae Order: Apiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449462946|ref|XP_004149196.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme 1-like [Cucumis sativus] gi|449500888|ref|XP_004161221.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/580 (71%), Positives = 479/580 (82%), Gaps = 11/580 (1%)
Query: 1 MEVPKFLSIFMLIAYLWVISNNNGV--EASHKIYPEFQSLA--AVKVKQLHRTAFHFQPP 56
M + FLS+ + ++ + NN V +A HKIYPE QS+ A +K LHRT FHFQP
Sbjct: 1 MNLFTFLSLLLGFSFFSLFINNGVVFVDALHKIYPELQSIQTDASVIKPLHRTRFHFQPR 60
Query: 57 KHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFD 113
++WIN GPMY+KGIYHLFYQYNPKGAVWGNIVWAHS+S+DLINW+ L+PA+YPSKPFD
Sbjct: 61 RNWINDPNGPMYFKGIYHLFYQYNPKGAVWGNIVWAHSISRDLINWKPLKPAIYPSKPFD 120
Query: 114 INGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG 173
INGCWSGSATVLPG+KP+ILYTG+D + RQVQNYA+PAN SDPYL +WIKPDNNP+V PG
Sbjct: 121 INGCWSGSATVLPGDKPVILYTGIDPQNRQVQNYAIPANLSDPYLTEWIKPDNNPIVDPG 180
Query: 174 PDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANT 233
P VNASAFRDPTTAW S GHW+ ++GS+RK RGMAYLYRSRDF+KWTKAKHP+HS ANT
Sbjct: 181 PGVNASAFRDPTTAWLSKSGHWKTVIGSKRKKRGMAYLYRSRDFVKWTKAKHPLHSAANT 240
Query: 234 GMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDK 293
GMWECPDFYPV + GK GLD S G K V KVSLDLTRY+YYT+G Y KD+YVPD
Sbjct: 241 GMWECPDFYPVPLRGKLGLDPSVTGNWVKHVFKVSLDLTRYEYYTVGKYFPKKDKYVPDN 300
Query: 294 DSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREV 353
SVDGW GLRYDYGNFYASK+F+D K RR+LWGWANESDS DD++KGWAG+Q IPR V
Sbjct: 301 TSVDGWSGLRYDYGNFYASKSFYDPLKKRRVLWGWANESDSAQDDVSKGWAGIQLIPRTV 360
Query: 354 WLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLD 413
WLD + +QL QWP++EL TLRGK V +S+Q+L KGH VEVKG+TAAQADVEV F SLD
Sbjct: 361 WLDHNQRQLKQWPVKELNTLRGKKVVLSHQKLLKGHTVEVKGITAAQADVEVMFSFSSLD 420
Query: 414 KAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHL 473
KA+ FDP W +DA+ C ++G+ QGGVGPFGLLTLAS+NL+EFTPVFFRIFK HKH+
Sbjct: 421 KADPFDPRW--VDAQAACDQLGNS-QGGVGPFGLLTLASENLDEFTPVFFRIFKAHHKHV 477
Query: 474 VLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSR 533
VLMCSDA SS+LK EGLYKP+FAG+V++DLS KKLSLRSLIDHSVVESFG GGKTCITSR
Sbjct: 478 VLMCSDARSSSLKEEGLYKPAFAGYVDIDLSRKKLSLRSLIDHSVVESFGGGGKTCITSR 537
Query: 534 VYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMN 573
VYPT VFDDAHL+ FNNGTE +TVE L AWSMK +MN
Sbjct: 538 VYPTKGVFDDAHLHVFNNGTEAITVEYLRAWSMKS-ARMN 576
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|404435525|gb|AFR69122.1| cell wall invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/577 (70%), Positives = 480/577 (83%), Gaps = 10/577 (1%)
Query: 1 MEVPKFLSIFMLIAYLWVISNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWI 60
M KFL +++A+L+V+ NN V SH+IY E+Q+ A KV Q+HRTA+HFQPP +WI
Sbjct: 1 MVTSKFL---IVLAFLFVLCNNGRVLGSHRIYVEYQNFKADKVSQVHRTAYHFQPPMNWI 57
Query: 61 N---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGC 117
N GPMYYKG+YHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALE A+YPSK FD NGC
Sbjct: 58 NDPNGPMYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEHAIYPSKEFDKNGC 117
Query: 118 WSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDN-NPVVFPGPDV 176
WSGS T+LP +KP+ILYTG+D K+RQVQNYAVP N SDPYLR+W KPD+ NP+V P V
Sbjct: 118 WSGSVTILPDDKPVILYTGIDPKKRQVQNYAVPKNLSDPYLREWDKPDDHNPIVDPDKSV 177
Query: 177 NASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMW 236
NASAFRDPTTAW DG WRM+VGSR K G+AYLYRS+DF +W KA+ P+HSL TGMW
Sbjct: 178 NASAFRDPTTAWLV-DGQWRMVVGSRDKDTGIAYLYRSKDFKEWVKAESPLHSLEKTGMW 236
Query: 237 ECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSV 296
ECPDF+PVS+SG+NGLDTS K KVSLD+TRY+YYTIGTY+++ D+Y+PD+DS+
Sbjct: 237 ECPDFFPVSLSGENGLDTSVFEKKGKHAFKVSLDVTRYEYYTIGTYDKENDKYIPDEDSI 296
Query: 297 DGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLD 356
DGW GLR+DYGNFYASKTFFD K+RRILWGWANESD+ DD KGWAG+Q IPR+VWLD
Sbjct: 297 DGWSGLRFDYGNFYASKTFFDPSKHRRILWGWANESDTVKDDKEKGWAGIQAIPRKVWLD 356
Query: 357 GSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAE 416
+GKQL+QWP+EELETLR V +SNQ+L+KG H+EVKG+TAAQADV+VTF PSLDKAE
Sbjct: 357 ANGKQLVQWPVEELETLRTNEVQLSNQKLQKGEHIEVKGITAAQADVDVTFSFPSLDKAE 416
Query: 417 KFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLM 476
FDP W+ LDA +C + GSKV+GG+GPFGLLTLAS+ LEEFTPVFFRIFK KH VL+
Sbjct: 417 SFDPKWEKLDALDVCAQKGSKVEGGLGPFGLLTLASEKLEEFTPVFFRIFKAPTKHAVLL 476
Query: 477 CSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYP 536
CSDASSS+L GLYKPSFAGFV+VDL++ KLSLRSLIDHSVVESFGA GKT I SRVYP
Sbjct: 477 CSDASSSSLGN-GLYKPSFAGFVDVDLTNNKLSLRSLIDHSVVESFGAEGKTVILSRVYP 535
Query: 537 TLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMN 573
TLA+ AHL+ FNNG+ET+T+EKL AWSMKKP +MN
Sbjct: 536 TLAILGKAHLFVFNNGSETITMEKLGAWSMKKP-QMN 571
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|124712|sp|P26792.1|INV1_DAUCA RecName: Full=Beta-fructofuranosidase, insoluble isoenzyme 1; AltName: Full=Cell wall beta-fructosidase 1; AltName: Full=Invertase 1; AltName: Full=Sucrose hydrolase 1; Flags: Precursor gi|167551|gb|AAA03516.1| beta-fructosidase [Daucus carota] | Back alignment and taxonomy information |
|---|
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/573 (72%), Positives = 472/573 (82%), Gaps = 12/573 (2%)
Query: 12 LIAYLWVISNN---NGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMY 65
L+A L V + NGVEA H+I+ QS+ A VKQ+HRT +HFQP ++WIN GPMY
Sbjct: 21 LLAILLVTTTTLHINGVEAFHEIHYNLQSVGAENVKQVHRTGYHFQPKQNWINDPNGPMY 80
Query: 66 YKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVL 125
YKG+YHLFYQYNPKGAVWGNIVWAHSVS DLINW LEPA++PSKPFD GC SGSAT+L
Sbjct: 81 YKGVYHLFYQYNPKGAVWGNIVWAHSVSTDLINWTPLEPAIFPSKPFDKYGCRSGSATIL 140
Query: 126 PGNKPIILYTGVDH---KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFR 182
PGNKP+ILYTG+ K QVQNYA+PAN SDPYLRKWIKPDNNP+V NA+AFR
Sbjct: 141 PGNKPVILYTGIVEGPPKNVQVQNYAIPANLSDPYLRKWIKPDNNPLVVANNGENATAFR 200
Query: 183 DPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFY 242
DPTTAW GHW+MLVGS+R RG+AYLYRS+DF+KWTKAKHPIHS ANTGMWECPDF+
Sbjct: 201 DPTTAWLDKSGHWKMLVGSKRNRRGIAYLYRSKDFIKWTKAKHPIHSQANTGMWECPDFF 260
Query: 243 PVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGL 302
PVS+ G NGLDTS G + K VLKVSLDLTRY+YYT+GTY DKDRY+PD SVDGW GL
Sbjct: 261 PVSLKGLNGLDTSVTGESVKHVLKVSLDLTRYEYYTVGTYLTDKDRYIPDNTSVDGWAGL 320
Query: 303 RYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQL 362
RYDYGNFYASKTFFD KNRRILWGWANESDST D+AKGWAG+Q IPR +WLD SGKQL
Sbjct: 321 RYDYGNFYASKTFFDPSKNRRILWGWANESDSTAHDVAKGWAGIQLIPRTLWLDPSGKQL 380
Query: 363 LQWPIEELETLRGKNVHISN-QELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPS 421
+QWPIEELETLRG V S Q+L KG VEVKG+TAAQADVEVTF SL K E FDP
Sbjct: 381 MQWPIEELETLRGSKVKFSRKQDLSKGILVEVKGITAAQADVEVTFSFKSLAKREPFDPK 440
Query: 422 WKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDAS 481
W DAE +C GS VQGGVGPFGLLTLAS+ LEE+TPVFFR+FK + H VLMCSDA+
Sbjct: 441 WLEYDAEKICSLKGSTVQGGVGPFGLLTLASEKLEEYTPVFFRVFKAQNTHKVLMCSDAT 500
Query: 482 SSTLKTEGLYKPSFAGFVNVDL-SDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAV 540
S+LK EGLY+PSFAGFV+VDL +DKK+SLRSLID+SVVESFGA GKTCI+SRVYPTLAV
Sbjct: 501 RSSLK-EGLYRPSFAGFVDVDLATDKKISLRSLIDNSVVESFGAKGKTCISSRVYPTLAV 559
Query: 541 FDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMN 573
+++AHLY FNNG+ET+TVE L+AWSMKKP++MN
Sbjct: 560 YENAHLYVFNNGSETITVENLDAWSMKKPLRMN 592
|
Source: Daucus carota Species: Daucus carota Genus: Daucus Family: Apiaceae Order: Apiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224140089|ref|XP_002323419.1| predicted protein [Populus trichocarpa] gi|222868049|gb|EEF05180.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/552 (73%), Positives = 462/552 (83%), Gaps = 6/552 (1%)
Query: 22 NNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWING-PMYYKGIYHLFYQYNPKG 80
NNG EASHKIY E+Q+L+ V Q+HRT +HFQPP+HWIN PMYYKG+YHLFYQYNPKG
Sbjct: 17 NNGAEASHKIYSEYQTLSVENVNQVHRTGYHFQPPRHWINAAPMYYKGLYHLFYQYNPKG 76
Query: 81 AVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTG-VDH 139
AVWGNIVWAHSVSKDLINWE+LEPA+YPSK FD GCWSGSATVLP +P+I YTG VD
Sbjct: 77 AVWGNIVWAHSVSKDLINWESLEPAIYPSKWFDNYGCWSGSATVLPNGEPVIFYTGIVDK 136
Query: 140 KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLV 199
Q+QNYAVPAN SDPYLR+W+KPD+NP+V P +VN SAFRDPTTAWW+ DGHWR+L+
Sbjct: 137 NNSQIQNYAVPANLSDPYLREWVKPDDNPIVNPDANVNGSAFRDPTTAWWA-DGHWRILI 195
Query: 200 GSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGG 259
GSRRKHRG+AYLYRS+DF KW KAKHP+HS+ TGMWECPDFYPVS+SG+NGLD S G
Sbjct: 196 GSRRKHRGVAYLYRSKDFKKWVKAKHPLHSVQGTGMWECPDFYPVSLSGENGLDPSVMGQ 255
Query: 260 NEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSR 319
N K VLKVSLD+TRY+YYT+GTY++ KD+Y PD+ VDGW GLR DYGNFYASKTFFD
Sbjct: 256 NVKHVLKVSLDMTRYEYYTMGTYDKKKDKYFPDEGLVDGWAGLRLDYGNFYASKTFFDPS 315
Query: 320 KNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVH 379
NRRILWGWANESD D KGWAG+Q IPR+VWLD SGKQLLQWP+ ELE LRG NV
Sbjct: 316 TNRRILWGWANESDDPQKDKDKGWAGIQLIPRKVWLDPSGKQLLQWPVAELEKLRGHNVQ 375
Query: 380 ISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQ 439
+SNQ L +G+HVEVK +TAAQADV+VTF SLDKAE FDP W LDA +C + GSK
Sbjct: 376 LSNQMLDQGNHVEVKVITAAQADVDVTFSFSSLDKAEPFDPKWAKLDALDVCAQKGSKDP 435
Query: 440 GGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASS--STLKTEGLYKPSFAG 497
GG+GPFGLLTLAS+NLEEFTPVFFR+FK KH VL+CSDA S+L E LYKPSFAG
Sbjct: 436 GGLGPFGLLTLASENLEEFTPVFFRVFKAADKHKVLLCSDARRFVSSLGKE-LYKPSFAG 494
Query: 498 FVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVT 557
FV+VDL+DKKLSLRSLIDHSVVESFGAGG+ I+SRVYPT+AVF++AHLY FNNG+ET+T
Sbjct: 495 FVDVDLTDKKLSLRSLIDHSVVESFGAGGRIAISSRVYPTIAVFENAHLYVFNNGSETIT 554
Query: 558 VEKLNAWSMKKP 569
VE LNAWSM P
Sbjct: 555 VENLNAWSMNTP 566
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 574 | ||||||
| TAIR|locus:2049445 | 591 | cwINV4 "cell wall invertase 4" | 0.993 | 0.964 | 0.642 | 1.1e-211 | |
| TAIR|locus:2079944 | 590 | CWINV2 "cell wall invertase 2" | 0.993 | 0.966 | 0.638 | 5.8e-208 | |
| TAIR|locus:2091606 | 584 | ATBFRUCT1 [Arabidopsis thalian | 0.972 | 0.955 | 0.565 | 1.4e-174 | |
| TAIR|locus:2205677 | 594 | FRUCT5 "beta-fructofuranosidas | 0.909 | 0.878 | 0.552 | 3.5e-162 | |
| TAIR|locus:2143099 | 550 | cwINV6 "6-&1-fructan exohydrol | 0.909 | 0.949 | 0.497 | 3.5e-139 | |
| TAIR|locus:2026177 | 648 | AT1G62660 [Arabidopsis thalian | 0.939 | 0.831 | 0.450 | 2.9e-126 | |
| TAIR|locus:2201966 | 664 | ATBETAFRUCT4 [Arabidopsis thal | 0.895 | 0.774 | 0.454 | 2.7e-123 | |
| UNIPROTKB|Q9FSV7 | 654 | 1-SST "Sucrose:sucrose 1-fruct | 0.885 | 0.776 | 0.422 | 2.5e-106 | |
| UNIPROTKB|Q4KBP1 | 499 | scrB "Sucrose-6-phosphate hydr | 0.533 | 0.613 | 0.316 | 7.5e-42 | |
| TIGR_CMR|BA_0753 | 491 | BA_0753 "sucrose-6-phosphate h | 0.567 | 0.663 | 0.333 | 1.2e-41 |
| TAIR|locus:2049445 cwINV4 "cell wall invertase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2046 (725.3 bits), Expect = 1.1e-211, P = 1.1e-211
Identities = 379/590 (64%), Positives = 457/590 (77%)
Query: 1 MEVPKFLSIFMLIAYLWVISNNN--GVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKH 58
M + +S+ +L+ L +SN N G++A H+IY E QS + V LHR +FHFQPPKH
Sbjct: 1 MAISNVISVLLLLLVLINLSNQNIKGIDAFHQIYEELQSESVESVNHLHRPSFHFQPPKH 60
Query: 59 WIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDIN 115
WIN GP+YYKG+YHLFYQYN KGAVWGNI+WAHSVSKDL+NWEALEPAL PSK FDI
Sbjct: 61 WINDPNGPVYYKGLYHLFYQYNTKGAVWGNIIWAHSVSKDLVNWEALEPALSPSKWFDIG 120
Query: 116 GCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPD 175
G WSGS T++PG PIILYTGV+ E Q+QNYA+P +PSDPYLRKWIKPD+NP+ P
Sbjct: 121 GTWSGSITIVPGKGPIILYTGVNQNETQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYT 180
Query: 176 VNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGM 235
+N SAFRDPTTAW+S DGHWR +VGS+RK RG+AY+YRSRDF W KAKHP+HS +TGM
Sbjct: 181 MNGSAFRDPTTAWFSKDGHWRTVVGSKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGM 240
Query: 236 WECPDFYPVSISG-KNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKD 294
WECPDF+PVS++ +NGLD + G N K VLKVSLD+TRY+YYT+G Y+ KDRY+PD +
Sbjct: 241 WECPDFFPVSLTDFRNGLDLDYVGPNTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGN 300
Query: 295 SVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVW 354
+ DGW GLR+DYGNFYASKTFFD +KNRRILWGWANESD+ DD+ KGWAG+Q IPR V
Sbjct: 301 TPDGWEGLRFDYGNFYASKTFFDYKKNRRILWGWANESDTVEDDILKGWAGLQVIPRTVL 360
Query: 355 LDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDK 414
LD S KQL+ WP+EE+E+LRG V ++N ++K G +EVKG+T AQADVEVTF + SL+K
Sbjct: 361 LDSSKKQLVFWPVEEIESLRGNYVRMNNHDIKMGQRIEVKGITPAQADVEVTFYVGSLEK 420
Query: 415 AEKFDPS--WKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDG--H 470
AE FDPS WK L+ LC GS V+GGVGPFGL+TLA+ +LEE+TPVFFR+F D H
Sbjct: 421 AEIFDPSFTWKPLE---LCNIKGSNVRGGVGPFGLITLATPDLEEYTPVFFRVFNDTKTH 477
Query: 471 KHLVLMCSDASSSTLKTE-GL------YKPSFAGFVNVXXXXXXXXXXXXIDHSVVESFG 523
K VLMCSDA S+LK + GL YKPSFAGFV+V IDHSVVESFG
Sbjct: 478 KPKVLMCSDARPSSLKQDTGLLAKDRMYKPSFAGFVDVDMADGRISLRSLIDHSVVESFG 537
Query: 524 AGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMN 573
A GKT ITSRVYP AV ++AHLY FNNGT+TVT+E LNAW+M +P++MN
Sbjct: 538 ALGKTVITSRVYPVKAVKENAHLYVFNNGTQTVTIESLNAWNMDRPLQMN 587
|
|
| TAIR|locus:2079944 CWINV2 "cell wall invertase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2011 (713.0 bits), Expect = 5.8e-208, P = 5.8e-208
Identities = 376/589 (63%), Positives = 454/589 (77%)
Query: 1 MEVPKFLSIFMLIAYLWVISNNNGVEASHKIYPEFQSLAAV--KVKQLHRTAFHFQPPKH 58
M PKF + +LI + + +NNGV+A HK++ + QS + V LHRTA+HFQPP+H
Sbjct: 1 MSAPKFGYVLLLIVLINI--SNNGVDAFHKVFKKLQSKSTSLESVSPLHRTAYHFQPPRH 58
Query: 59 WIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDIN 115
WIN PM YKG+YHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPA+YPSK FDIN
Sbjct: 59 WINDPNAPMLYKGVYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAIYPSKWFDIN 118
Query: 116 GCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPD 175
G WSGSAT +PG P+ILYTG+ + Q+QNYA+P + SDPYL+ WIKPD+NP+V P
Sbjct: 119 GTWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPDNG 178
Query: 176 VNASAFRDPTTAWWSN-DGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTG 234
N SAFRDPTTAW++ DG+WRMLVGS+RK+RG+AY+Y+SRDF KW K+K PIHS TG
Sbjct: 179 ENGSAFRDPTTAWFNKKDGYWRMLVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTG 238
Query: 235 MWECPDFYPVSISGK-NGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDK 293
MWECPDF+PVS++ K NGLD S+ G N K VLKVSLDLTRY+YYT+GTY+ KDRY PD
Sbjct: 239 MWECPDFFPVSVTDKKNGLDFSYDGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDG 298
Query: 294 DSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREV 353
+ DGW GLR+DYGN+YASKTFFD + NRRILWGWANESD+ DD KGWAG+Q IPR +
Sbjct: 299 YTPDGWDGLRFDYGNYYASKTFFDDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTI 358
Query: 354 WLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLD 413
LD SGKQL+ WPIEE+E+LRGKNV ++NQ+++ G EV+G+T AQ DV+VTF + +L+
Sbjct: 359 LLDSSGKQLVFWPIEEIESLRGKNVQMTNQKMEMGQRFEVQGITPAQVDVDVTFNVGNLE 418
Query: 414 KAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDG--HK 471
KAEKFD S+ E LC GS V GGVGPFGL+TLA+ +LEE+TPVFFR+FKD +K
Sbjct: 419 KAEKFDESFATKPLE-LCNLKGSNVNGGVGPFGLITLATSDLEEYTPVFFRVFKDAASNK 477
Query: 472 HLVLMCSDASSSTLKT-------EGLYKPSFAGFVNVXXXXXXXXXXXXIDHSVVESFGA 524
VLMCSDA S+LK E +YKPSFAGFV+V IDHSVVESFGA
Sbjct: 478 PKVLMCSDAKPSSLKKDTGTDAKERMYKPSFAGFVDVGLLDGKISLRSLIDHSVVESFGA 537
Query: 525 GGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMN 573
GKT ITSRVYPT AV + AHL+ FNNG++ VTVE LNAW+M+KP+KMN
Sbjct: 538 KGKTVITSRVYPTKAVGEKAHLFVFNNGSQPVTVESLNAWNMQKPLKMN 586
|
|
| TAIR|locus:2091606 ATBFRUCT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1696 (602.1 bits), Expect = 1.4e-174, P = 1.4e-174
Identities = 329/582 (56%), Positives = 414/582 (71%)
Query: 2 EVPKFLSIFMLIAYLWVISNNN-GVEASHKIYPEFQSLAAVK---VKQLHRTAFHFQPPK 57
EV + +++L+ L I N +EASH +Y K V Q +RT FHFQPPK
Sbjct: 4 EVCSNIGLWLLLTLL--IGNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPK 61
Query: 58 HWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDI 114
+W+N GPM YKGIYHLFYQ+NPKGAVWGNIVWAHS S DLINW+ PA++PS PFDI
Sbjct: 62 NWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDI 121
Query: 115 NGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGP 174
NGCWSGSAT+LP KP+ILYTG+D K +QVQN A P N SDPYLR+W K NP++ P
Sbjct: 122 NGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDA 181
Query: 175 --DVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLAN 232
+NAS+FRDPTTAW D WR+++GS+ RG+A Y S+DF+KW K+ P+H
Sbjct: 182 VNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDG 241
Query: 233 TGMWECPDFYPVSISGKNGLDTS-FAGGNE--KFVLKVSLDLTRYDYYTIGTYNRDKDRY 289
+GMWECPDF+PV+ G NG++TS F NE K VLK+SLD T++DYYTIGTY+R KD++
Sbjct: 242 SGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKF 301
Query: 290 VPDKD-SVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQT 348
VPD +DG RYDYG +YASKTFFDS KNRRILWGW NES S DD+ KGW+G+QT
Sbjct: 302 VPDNGFKMDG-TAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQT 360
Query: 349 IPREVWLDGSGKQLLQWPIEELETLRGKNV-HISNQELKKGHHVEVKGVTAAQADVEVTF 407
IPR++WLD SGKQL+QWP+ E+E LR K V ++ N+ LK G +EV GVTAAQADVEV F
Sbjct: 361 IPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLF 420
Query: 408 KLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFK 467
K+ L+KA+ +PSW D + +C K+ V+ G+GPFGL+ LASKNLEE+T V+FRIFK
Sbjct: 421 KVRDLEKADVIEPSWT--DPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFK 478
Query: 468 ---DGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVXXXXXXXXXXXXIDHSVVESFGA 524
+ +K++VLMCSD S S+LK + K ++ FV++ IDHSVVESFG
Sbjct: 479 ARQNSNKYVVLMCSDQSRSSLKEDN-DKTTYGAFVDINPHQPLSLRAL-IDHSVVESFGG 536
Query: 525 GGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSM 566
G+ CITSRVYP LA+ +HL+AFN G ++V V LNAWSM
Sbjct: 537 KGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSM 578
|
|
| TAIR|locus:2205677 FRUCT5 "beta-fructofuranosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1579 (560.9 bits), Expect = 3.5e-162, P = 3.5e-162
Identities = 298/539 (55%), Positives = 377/539 (69%)
Query: 43 VKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWG-NIVWAHSVSKDLIN 98
+ Q +RT +HFQP K+W+N GPM YKGIYHLFYQYNP GAVW IVW HS S DL+N
Sbjct: 34 LNQPYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVN 93
Query: 99 WEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYL 158
W + PA PS+P DINGCWSGS T+LP KP+ILYTG+D + QVQN AVP N SDPYL
Sbjct: 94 WISQPPAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYL 153
Query: 159 RKWIKPDNNPVVFPGP--DVNASAFRDPTTAWWSNDGHWRMLVGSRRK-HRGMAYLYRSR 215
R+W KP NP++ +N FRDPTTAW DG WR++VGS RG+A LY+SR
Sbjct: 154 REWSKPPQNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSR 213
Query: 216 DFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNE-KFVLKVSLDLTRY 274
DF WT++ P+H TGMWECPDF+PVSI+G +G++TS G N K VLKVSL T +
Sbjct: 214 DFFNWTQSMKPLHYEDLTGMWECPDFFPVSITGSDGVETSSVGENGIKHVLKVSLIETLH 273
Query: 275 DYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDS 334
DYYTIG+Y+R+KD YVPD V R DYG +YASKTF+D K RRILWGW NES
Sbjct: 274 DYYTIGSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSP 333
Query: 335 TFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVK 394
DD+ KGW+G+Q+ PR++WLD SGK+LLQWPIEE+ETLRG+ V+ + LK G ++V
Sbjct: 334 AKDDIEKGWSGLQSFPRKIWLDESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVH 393
Query: 395 GVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKN 454
GVTAAQADVEV+FK+ L+KA+ +PSW D + +C + V G+GPFGL+ LAS +
Sbjct: 394 GVTAAQADVEVSFKVKELEKADVIEPSWT--DPQKICSQGDLSVMSGLGPFGLMVLASND 451
Query: 455 LEEFTPVFFRIFKDGH------KHLVLMCSDASSSTLKTEGLYKPSFAGFVNVXXXXXXX 508
+EE+T V+FRIFK K++VLMCSD S S+L E K +F FV +
Sbjct: 452 MEEYTSVYFRIFKSNDDTNKKTKYVVLMCSDQSRSSLNDEN-DKSTFGAFVAIDPSHQTI 510
Query: 509 XXXXXIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMK 567
IDHS+VES+G GG+TCITSRVYP LA+ ++A+L+ FN GT++V + L+AWS+K
Sbjct: 511 SLRTLIDHSIVESYGGGGRTCITSRVYPKLAIGENANLFVFNKGTQSVDILTLSAWSLK 569
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| TAIR|locus:2143099 cwINV6 "6-&1-fructan exohydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1362 (484.5 bits), Expect = 3.5e-139, P = 3.5e-139
Identities = 268/539 (49%), Positives = 353/539 (65%)
Query: 46 LHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGN--IVWAHSVSKDLINWE 100
L+RT+FHFQP ++W+N PMYYKG YHLFYQ NP + I+W HSVS+D++NW
Sbjct: 15 LNRTSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWGHSVSQDMVNWI 74
Query: 101 ALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVD-HKERQVQNYAVPANPSDPYLR 159
LEPAL PS+ FDIN CWSGSAT+LP +P+ILYTG+D + ++QV A P + SDP LR
Sbjct: 75 QLEPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVAEPKDVSDPLLR 134
Query: 160 KWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK--HRGMAYLYRSRDF 217
+W+KP NPV+ P +V + FRDPT AW DG WR+L+G++ K +GMA LYRS DF
Sbjct: 135 EWVKPKYNPVMVPPSNVPFNCFRDPTEAWKGQDGKWRVLIGAKEKDTEKGMAILYRSDDF 194
Query: 218 MKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYY 277
++WTK P+ TGMWECPDF+PVSI+GK G+DTS + + VLK S D Y
Sbjct: 195 VQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRHVLKASFGGN--DCY 252
Query: 278 TIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFD 337
IG Y+ + + + D + + LRYD+G FYASK FFDS KNRRI WGW E+DS D
Sbjct: 253 VIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINWGWVIETDSKED 312
Query: 338 DMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISN-QELKKGHHVEVKGV 396
D KGWAG+ T+PRE+W+D SGK+L+QWPIEE+ LR K+V + + E K G E+ G+
Sbjct: 313 DFKKGWAGLMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDDCYEFKTGSTFEISGI 372
Query: 397 TAAQADVEVTFKLPSLDK-AEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNL 455
TAAQADVEVTF LP L+ E D +D L + S V GPFGLL LAS +L
Sbjct: 373 TAAQADVEVTFNLPFLENNPEILDAD--QVDDATLFDR-DSSVGCVYGPFGLLALASSDL 429
Query: 456 EEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVXXXXXXXXXXXXID 515
E T +FF++ + G+ + V+MCS S+L+ + + K S F+++ ID
Sbjct: 430 SEQTAIFFKVIRRGNGYAVVMCSSEKRSSLR-DNIKKSSHGAFLDIDPRHEKISLRCLID 488
Query: 516 HSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMNS 574
HS++ES+G GGKT ITSRVYP LA+ + A LY FN+G V + L AWSM+ ++NS
Sbjct: 489 HSIIESYGVGGKTVITSRVYPKLAIGEAAKLYVFNDGENGVIMTSLEAWSMRN-AQINS 546
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| TAIR|locus:2026177 AT1G62660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1240 (441.6 bits), Expect = 2.9e-126, P = 2.9e-126
Identities = 252/559 (45%), Positives = 337/559 (60%)
Query: 16 LWVISNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHL 72
+W+ S++ VEA +P ++ + + RTAFHFQP K+W+N GP++YKG YH
Sbjct: 83 VWISSDDGKVEA----FPWNNTILSWQ-----RTAFHFQPEKNWMNDPNGPLFYKGWYHF 133
Query: 73 FYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPII 132
FYQYNP AVWG+IVW H+VSKDLI+W L A+ P + +D NG W+GSAT L ++
Sbjct: 134 FYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSATFLDDGSIVM 193
Query: 133 LYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSND 192
LYTG + QVQN A P +PSDP L KW+K NPV+ P P + A FRDPTTAW ++
Sbjct: 194 LYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKFSGNPVLVPPPGIGAKDFRDPTTAWKTSS 253
Query: 193 GHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGL 252
G WR+ +GS+ G++ +Y + DF + K + +H + NTGMWEC DFYPVS + NGL
Sbjct: 254 GKWRITIGSKINRTGISLIYDTTDFKTYEKHETLLHQVPNTGMWECVDFYPVSKTQLNGL 313
Query: 253 DTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVD-GWR-GLRYDYGNFY 310
DTS G + K V+K S+D TR D+Y IGTY+ +VPD S+D G GLRYDYG +Y
Sbjct: 314 DTSVNGPDVKHVIKASMDDTRIDHYAIGTYDDSNATWVPDNPSIDVGISTGLRYDYGKYY 373
Query: 311 ASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDG-SGKQLLQWPIEE 369
ASKTF+D K RRILWGW ESDS D+ KGW+ VQ IPR V LD + K L+QWP+EE
Sbjct: 374 ASKTFYDQNKGRRILWGWIGESDSEAADVQKGWSSVQGIPRTVVLDTRTHKNLVQWPVEE 433
Query: 370 LETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEH 429
+++LR + + + G V V +A Q D+E F++ + D FD D +
Sbjct: 434 IKSLRLSSKKF-DMTIGPGTVVPVDVGSATQLDIEAEFEIKTDDLKLFFDDDSVEADNKF 492
Query: 430 LCGKIG-SKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHL-VLMCSDASSSTLKT 487
C G S +G +GPFG LA + L E TPV+F + K H L + C+D S STL
Sbjct: 493 SCETNGGSTARGALGPFGFSVLADEGLSEQTPVYFYVTKGKHSKLNTVFCTDTSRSTLAN 552
Query: 488 EGLYKPSFAGFVNVXXXXXXXXXXXXIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLY 547
+ + KP + FV V +DHS+VE F GG++CITSRVYPT A++ L+
Sbjct: 553 D-VVKPIYGSFVPVLKGEKLTMRIL-VDHSIVEGFAQGGRSCITSRVYPTKAIYGATKLF 610
Query: 548 AFNNGTETVTVEKLNAWSM 566
FNN + W M
Sbjct: 611 LFNNAIDATVTASFTVWQM 629
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| TAIR|locus:2201966 ATBETAFRUCT4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 241/530 (45%), Positives = 328/530 (61%)
Query: 48 RTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEP 104
RTAFHFQP ++W+N GP++YKG YH FYQYNP AVWG+IVW H+VS+DLI+W L
Sbjct: 121 RTAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWVHLPI 180
Query: 105 ALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKP 164
A+ + +D NG W+GSAT LP ++LYTG K QVQN A P +P+DP L KW+K
Sbjct: 181 AMVADQWYDSNGVWTGSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKF 240
Query: 165 DNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAK 224
NPV+ P P + FRDPTTAW +++G WR+ +GS+ G++ +Y + DF + K
Sbjct: 241 PGNPVLVPPPGILPKDFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYEKLD 300
Query: 225 HPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNR 284
+H + NTGMWEC DFYPVS + NGLDTS G + K ++K S+D TR+D+Y +GTY
Sbjct: 301 TLLHRVPNTGMWECVDFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFD 360
Query: 285 DKDRYVPDKDSVD-GWRG-LRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKG 342
++PD ++D G LRYDYG FYASK+F+D K RR+LW W ESDS D+ KG
Sbjct: 361 SNGTWIPDDPTIDVGMTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDVQKG 420
Query: 343 WAGVQTIPREVWLDG-SGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQA 401
W+ +Q IPR V LD +GK L+QWP+EE+++LR + + E+ G V V +AAQ
Sbjct: 421 WSSLQGIPRTVVLDTKTGKNLVQWPVEEIKSLRLSSKQF-DLEVGPGSVVPVDVGSAAQL 479
Query: 402 DVEVTFKL--PSLDKAEKFDPSWKNLDAEHL-CGKIG-SKVQGGVGPFGLLTLASKNLEE 457
D+E F++ SLDK + +AE C K G S V+G +GPFG LA+++L E
Sbjct: 480 DIEAEFEINKESLDKI--IGNASVVAEAEEFSCEKSGGSTVRGALGPFGFSVLATESLSE 537
Query: 458 FTPVFFRIFKDGHKHL-VLMCSDASSSTLKTEGLYKPSFAGFVNVXXXXXXXXXXXXIDH 516
TPV+F + K L C+D S S++ + + KP + V V +DH
Sbjct: 538 QTPVYFYVAKGKDSELKTFFCTDTSRSSVAND-VVKPIYGSVVPVLKGEKLTMRIL-VDH 595
Query: 517 SVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSM 566
S+VE+FG GG+TCITSRVYPT A++ A L+ FNN + W M
Sbjct: 596 SIVEAFGQGGRTCITSRVYPTTAIYGAAKLFLFNNALDATVTASFTVWQM 645
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| UNIPROTKB|Q9FSV7 1-SST "Sucrose:sucrose 1-fructosyltransferase" [Festuca arundinacea (taxid:4606)] | Back alignment and assigned GO terms |
|---|
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 227/537 (42%), Positives = 312/537 (58%)
Query: 45 QLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEA 101
Q RT FHFQP KH++N GP+YY G YHLFYQYNPKG WGNI WAH+VSKD++NW
Sbjct: 119 QWQRTGFHFQPEKHYMNDPNGPVYYGGWYHLFYQYNPKGDSWGNIAWAHAVSKDMVNWRH 178
Query: 102 LEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKW 161
L A+ P + +D NG +GS TVLP + I+LYTG QVQ A PA+PSDP LR+W
Sbjct: 179 LPLAMVPDQWYDSNGVLTGSITVLPDGQVILLYTGNTDTLAQVQCLATPADPSDPLLREW 238
Query: 162 IKPDNNPVVFPGPDVNASAFRDPTTAWWSN-DGHWRMLVGSRRK--HRGMAYLYRSRDFM 218
IK NP+++P P + FRDP TAW+ + D WR ++GS+ H G+ Y+++DF+
Sbjct: 239 IKHPANPILYPPPGIGLKDFRDPLTAWFDHSDNTWRTVIGSKDDDGHAGIILSYKTKDFV 298
Query: 219 KWTKAKHPIHSLAN-TGMWECPDFYPVSISGKNGLDTSFAGGNEK----FVLKVSLDLTR 273
+ +H + TGM+EC D YPV G + GG++ FVLK S D R
Sbjct: 299 NYELMPGNMHRGPDGTGMYECIDLYPVG-----GNSSEMLGGDDSPDVLFVLKESSDDER 353
Query: 274 YDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESD 333
+DYY +G ++ + + P +D GLRYD+G +YASK+F+D +KNRRI+W + E+D
Sbjct: 354 HDYYALGRFDAAANIWTPIDQELDLGIGLRYDWGKYYASKSFYDQKKNRRIVWAYIGETD 413
Query: 334 STFDDMAKGWAGVQTIPREVWLDGSGK-QLLQWPIEELETLRGKNVHISNQELKKGHHVE 392
S D+ KGWA + TIPR V LD + L+QWP+EEL+TLR + +S + G +
Sbjct: 414 SEQADITKGWANLMTIPRTVELDKKTRTNLIQWPVEELDTLRRNSTDLSGITVDAGSVIR 473
Query: 393 VKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLAS 452
+ AQ D+E +F+L S D D + D + C G+ V+G +GPFGLL LA+
Sbjct: 474 LPLHQGAQIDIEASFQLNSSD----VD-ALTEADVSYNCSTSGAAVRGALGPFGLLVLAN 528
Query: 453 KNLEEFTPVFFRIFK--DGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVXXXXXXXXX 510
E+ T V+F + K DG C D S ST + + + V V
Sbjct: 529 GRTEQ-TAVYFYVSKGVDGALQ-THFCHDESRST-QAKDVVNRMIGSIVPVLDGETFSVR 585
Query: 511 XXXIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGT-ETVTVEKLNAWSM 566
+DHS+V+SF GG+ TSR YPT A++ A +Y FNN T TVT E+L + M
Sbjct: 586 VL-VDHSIVQSFAMGGRITATSRAYPTEAIYAAAGVYLFNNATGATVTAERLVVYEM 641
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| UNIPROTKB|Q4KBP1 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 408 (148.7 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 108/341 (31%), Positives = 168/341 (49%)
Query: 46 LHRTAFHFQPPKHWINGP---MYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEAL 102
++R A+H PP W+N P +Y++G YH+FYQ++P A WG + W H+ S+DL++WE L
Sbjct: 31 VYRLAYHLAPPVGWMNDPNGLVYFRGEYHVFYQHHPYSAQWGPMHWGHAKSRDLVHWEHL 90
Query: 103 EPALYPSKPFDINGCWSGSATVLPGNKPIILYTG-----VDHKERQVQNYAVPANPSDPY 157
AL P + +D +GC+SGSA V+ + ++YTG ER ++ A+ +D
Sbjct: 91 PIALAPGEAYDRDGCFSGSAVVMD-DVLYLIYTGHTWLGAPGDERSIRQVQCLASSTDGV 149
Query: 158 LRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDF 217
+ K + PV+ P+ FRDP W W M +G+R+ LYRS D
Sbjct: 150 A--FSK--HGPVIDRAPEPGIMHFRDPKV--WRRGEQWWMALGARQGDAPQLLLYRSGDL 203
Query: 218 MKWTKAKHPIHSLANTG--MWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYD 275
WT + + + MWECPD + + +G D F + L+ + YD
Sbjct: 204 HHWTYLRCALQGQRESDGYMWECPDLFEL-----DGCDV-FLYSPQ------GLNPSGYD 251
Query: 276 YYTIGTYNRDKDRYVPDKDSVDGWRGLR-YDYGN-FYASKTFFDSRKNRRILWGWANESD 333
+ N + + D+ LR D+G+ FYA++T + RR+LW W + D
Sbjct: 252 NWN-KFQNSYRMGLLDDRGYFSEGGELRELDHGHDFYAAQTLL-APDGRRLLWAWMDMWD 309
Query: 334 STFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLR 374
S A+ W G ++PRE L +G++L P EL LR
Sbjct: 310 SPMPSQAQHWCGALSLPRE--LSRNGERLRMRPARELAALR 348
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| TIGR_CMR|BA_0753 BA_0753 "sucrose-6-phosphate hydrolase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 391 (142.7 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 119/357 (33%), Positives = 176/357 (49%)
Query: 34 EFQSLAAVKVKQLHRTAFHFQPPKHWINGP---MYYKGIYHLFYQYNPKGAVWGNIVWAH 90
E SL + + + +H PP +N P YY YH+FYQ+ P G + G W H
Sbjct: 14 ELHSLYEIANQDSWKPIYHIHPPFGLMNDPNGVSYYNDEYHVFYQWYPFGPIHGMKHWGH 73
Query: 91 SVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTG-VDHKERQVQNYAV 149
SKDLINWE + A+ P++ ++ +G +SGSA ++ + +LYTG + + +
Sbjct: 74 VKSKDLINWERMPVAIIPTESYESHGAYSGSA-IVKDDLLHLLYTGNIKNPDDSRDAKQC 132
Query: 150 PANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHR-GM 208
A Y K NNPV+ PD RDP W ND ++ ML+G++RK++ G
Sbjct: 133 MATMDSQYTMT--KYSNNPVIDIIPDGYTKHVRDPKV-WKHNDIYY-MLLGAQRKNKTGT 188
Query: 209 AYLYRSRDFMKWTKAKHPIHSLANTG-MWECPDFYPVSISGKNGLDTSFAGGNEKFVLKV 267
LY+S+D W +L G MWECPD++ +SGK+ L S G + K
Sbjct: 189 LLLYKSKDLYNWNFQGEITTNLKEFGFMWECPDYF--QLSGKDVLLFSPQG-----IEKD 241
Query: 268 SLDLTR-YDY-YTIGTYNRDKDRYVPDKDSVDGWRGLRYDYG-NFYASKTFFDSRKNRRI 324
D Y+ Y IG ++ K+ Y +D + D G +FYA +T DS +RR+
Sbjct: 242 REDFHNIYNVVYAIGHFDI-KNLYF----HIDSY--YEADKGFDFYAPQTLEDST-SRRL 293
Query: 325 LWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHIS 381
L+ WA S+ T+ WA T+PRE+ L+ + L Q P+ EL LR IS
Sbjct: 294 LFAWAGSSEITYPSDDYMWAHCLTLPRELTLEDN--ILKQKPVSELTKLRTTKKEIS 348
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| D2IGW7 | 1FEH_BROPI | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5509 | 0.9041 | 0.8621 | N/A | no |
| Q70AT7 | 1FEH_HORVU | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5395 | 0.9268 | 0.8881 | N/A | no |
| Q43089 | INV1_PEA | 3, ., 2, ., 1, ., 2, 6 | 0.5461 | 0.9250 | 0.9567 | N/A | no |
| Q2UXF7 | 6FEH_WHEAT | 3, ., 2, ., 1, ., 1, 5, 4 | 0.5184 | 0.8954 | 0.8595 | N/A | no |
| Q8W413 | INV4_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.6643 | 0.9599 | 0.9323 | yes | no |
| B6DZC8 | 1FEH3_WHEAT | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5547 | 0.9041 | 0.8708 | N/A | no |
| A2X5P7 | INV1_ORYSI | 3, ., 2, ., 1, ., 2, 6 | 0.6323 | 0.9163 | 0.9116 | N/A | no |
| Q84PN8 | 1FEH1_WHEAT | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5459 | 0.9094 | 0.8743 | N/A | no |
| Q84LA1 | 1FEH2_WHEAT | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5515 | 0.9094 | 0.8758 | N/A | no |
| A2YZ01 | INV7_ORYSI | 3, ., 2, ., 1, ., 2, 6 | 0.5404 | 0.8989 | 0.8657 | N/A | no |
| P49174 | INVA_MAIZE | 3, ., 2, ., 1, ., 2, 6 | 0.6187 | 0.9390 | 0.9135 | N/A | no |
| B6DXP5 | 1FEH_LEYCH | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5415 | 0.9041 | 0.865 | N/A | no |
| P26792 | INV1_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.7260 | 0.9773 | 0.9476 | N/A | no |
| B6DZD0 | 1FEH_TRIUA | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5478 | 0.9094 | 0.8743 | N/A | no |
| B6DZD1 | 1FEH_AEGSP | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5553 | 0.9094 | 0.8773 | N/A | no |
| B6DZD2 | 1FEH_AEGTA | 3, ., 2, ., 1, ., 1, 5, 3 | 0.5534 | 0.9094 | 0.8758 | N/A | no |
| Q0JDC6 | INV3_ORYSJ | 3, ., 2, ., 1, ., 2, 6 | 0.6146 | 0.9390 | 0.9197 | yes | no |
| Q01IS7 | INV2_ORYSI | 3, ., 2, ., 1, ., 2, 6 | 0.5920 | 0.9459 | 0.9080 | N/A | no |
| Q01IS8 | INV3_ORYSI | 3, ., 2, ., 1, ., 2, 6 | 0.6146 | 0.9390 | 0.9197 | N/A | no |
| Q70XE6 | 6FEH_BETVU | 3, ., 2, ., 1, ., 1, 5, 4 | 0.5660 | 0.9041 | 0.8564 | N/A | no |
| Q39692 | INV2_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.6804 | 0.9912 | 0.9611 | N/A | no |
| Q39693 | INV3_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.6908 | 0.9686 | 0.9536 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.976 |
| 3rd Layer | 3.2.1.26 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00021585001 | SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (572 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00038825001 | SubName- Full=Chromosome chr5 scaffold_98, whole genome shotgun sequence; (1031 aa) | • | 0.899 | |||||||
 | GSVIVG00038290001 | SubName- Full=Chromosome undetermined scaffold_92, whole genome shotgun sequence; (196 aa) | • | 0.899 | |||||||
 | GSVIVG00036138001 | SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (281 aa) | • | 0.899 | |||||||
 | GSVIVG00033041001 | SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (808 aa) | • | 0.899 | |||||||
 | BG1 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (504 aa) | • | 0.899 | |||||||
 | GSVIVG00029420001 | SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (427 aa) | • | 0.899 | |||||||
 | GSVIVG00028135001 | SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (865 aa) | • | 0.899 | |||||||
 | GSVIVG00028094001 | SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (766 aa) | • | 0.899 | |||||||
 | GSVIVG00028036001 | SubName- Full=Putative uncharacterized protein (Chromosome chr7 scaffold_42, whole genome shotg [...] (811 aa) | • | 0.899 | |||||||
 | GSVIVG00027626001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (262 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 574 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 0.0 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-157 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 6e-99 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 4e-67 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 2e-52 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 4e-49 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 1e-22 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 3e-15 | |
| pfam08244 | 83 | pfam08244, Glyco_hydro_32C, Glycosyl hydrolases fa | 9e-14 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 545 bits (1407), Expect = 0.0
Identities = 209/487 (42%), Positives = 263/487 (54%), Gaps = 62/487 (12%)
Query: 52 HFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYP 108
HFQPPK W+N G +YYKG YHLFYQYNP GAVWGNI W H+VSKDL++W L AL P
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGNIHWGHAVSKDLVHWTHLPVALAP 60
Query: 109 SKPFDINGCWSGSATVLPGNKPIILYTGV--DHKERQVQNYAVPANPSDPYLRKWIKPDN 166
+ +D NG +SGSA + PGN +LYTG QVQ A SD W K D
Sbjct: 61 DEWYDSNGVFSGSAVIDPGN-LSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYDG 119
Query: 167 NPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVG-SRRKHRGMAYLYRSRDFMKWTKAKH 225
NPV+ P P FRDP +W + W M++G S RG+A LYRS D WT
Sbjct: 120 NPVLTPPPGGGTEHFRDPKV-FWYDGDKWYMVIGASDEDKRGIALLYRSTDLKNWTLLSE 178
Query: 226 PIHSLA--NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYN 283
+HSL GMWECPD +P+ G DTS K VLKVS +YY +G ++
Sbjct: 179 FLHSLLGDTGGMWECPDLFPLPGEG----DTS------KHVLKVSPQGGSGNYYFVGYFD 228
Query: 284 RDKDRYVPDKDSVDGWRGLRYDYG-NFYASKTFFDSRKNRRILWGWANESDSTFDDMA-K 341
D D + PD D GLR DYG +FYAS+TF+D NRRIL GW DS DD+ K
Sbjct: 229 GD-DTFTPDDPV-DTGHGLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVPTK 286
Query: 342 GWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQ- 400
GWAG ++PRE+ LD +G +LLQWP+EELE+LR K N LK G E+ G+TA+
Sbjct: 287 GWAGALSLPRELTLDLTGGKLLQWPVEELESLRNKKEL-LNLTLKNGSVTELLGLTASGD 345
Query: 401 -ADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFT 459
++E++F++ S G GPFGLL ASK+L E T
Sbjct: 346 SYEIELSFEVDS----------------------------GTAGPFGLLVRASKDLSEQT 377
Query: 460 PVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVV 519
V++ + +C D SS + +K FV +D + LSLR L+D S V
Sbjct: 378 AVYYDVSN------GTLCLDRRSSGGSFDEAFKGVRGAFVPLD-PGETLSLRILVDRSSV 430
Query: 520 ESFGAGG 526
E F GG
Sbjct: 431 EIFANGG 437
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 452 bits (1164), Expect = e-157
Identities = 153/326 (46%), Positives = 185/326 (56%), Gaps = 32/326 (9%)
Query: 52 HFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYP 108
HFQPPK W+N G +YYKG YHLFYQYNP GAVWGN W H+VSKDL++WE L AL P
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGNKHWGHAVSKDLVHWEHLPVALAP 60
Query: 109 SKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNP 168
+ +D NGC+SGSA VLP N ++LYTG + QVQ A A+ R W K NP
Sbjct: 61 DEWYDSNGCFSGSAVVLPDN-LVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGNP 115
Query: 169 VVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-HRGMAYLYRSRDFMKWTKAKHPI 227
V+ P FRDP AW+ DG W M++G++ RG A LYRS+D W +
Sbjct: 116 VIINPPPGYTKHFRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLGELL 175
Query: 228 HSLA-NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL---TRYDYYTIGTYN 283
HS+ GMWECPD +PV G K VLK S DYY IGT++
Sbjct: 176 HSVPDGGGMWECPDLFPVDGK---------DNGPVKHVLKFSPQGYQNGYQDYYFIGTFD 226
Query: 284 RDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMA-- 340
D D + P + R DYG FYAS+TF+D RRIL GW E DS DD+
Sbjct: 227 ADGDTFTPPDE-------QRLDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDVPTT 279
Query: 341 KGWAGVQTIPREVWLDGSGKQLLQWP 366
KGWAG +IPRE+ L G +LLQWP
Sbjct: 280 KGWAGALSIPRELTLKDEGGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 301 bits (774), Expect = 6e-99
Identities = 122/321 (38%), Positives = 159/321 (49%), Gaps = 32/321 (9%)
Query: 58 HWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDI 114
W+N G +Y+ G YHLFYQYNP G VWGN+ W H+ SKDL++WE L AL P P+D
Sbjct: 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDS 60
Query: 115 NGCWSGSATVLPGNKPIILYTGV---DHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVF 171
GC+SGSA V K ++ YTG D RQ Q A S R + K + NPV+
Sbjct: 61 GGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAY----STDDGRTFTKYEGNPVIP 116
Query: 172 PGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-HRGMAYLYRSRDFMKWTKAKHPIHSL 230
P PD + FRDP W DG W M++G+ + G LYRS D W + SL
Sbjct: 117 P-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNWEYLGELLTSL 173
Query: 231 ANTG-MWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRY 289
+ G MWECPD +P+ + GK L S G + Y +G ++ +
Sbjct: 174 GDFGYMWECPDLFPLDVEGKWVLIFSPQGLEPE-------GNGSGTGYLVGDFDGTTFTF 226
Query: 290 VPDKDSVDGWRGLRYDYG-NFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQT 348
+ DYG +FYA +TF D RRIL GW D + GWAG T
Sbjct: 227 DHTE-------FGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLT 278
Query: 349 IPREVWLDGSGKQLLQWPIEE 369
+PRE+ L G +L Q P+ E
Sbjct: 279 LPRELSLK-DGGRLYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 225 bits (575), Expect = 4e-67
Identities = 148/528 (28%), Positives = 212/528 (40%), Gaps = 88/528 (16%)
Query: 25 VEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGA 81
E E + ++ K +R +HF PP W+N G +Y+ G YHLFYQYNP GA
Sbjct: 6 QELLLWAQEELEKISESVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGA 65
Query: 82 VWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTG-VDHK 140
G W H+VSKDL++WE L AL P +D +GC+SGSA V+ + YTG V
Sbjct: 66 AHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDS 124
Query: 141 ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVG 200
Q A D + K NP++ P+ FRDP W G W M++G
Sbjct: 125 NGIRQQTQCIAYSEDGG--TFEKYSGNPII-DQPEGYTPHFRDPKVV-WDEGGKWWMMLG 180
Query: 201 SRR-KHRGMAYLYRSRDFMKWTKAKHPIHSLANTG-MWECPDFYPVSISGKNGLDTSFAG 258
++ +G LY S D W G MWECPD + +
Sbjct: 181 AQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE----------D 230
Query: 259 GNEKFVLKVSLDLTRYD-----YYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYG-NFYAS 312
+ +S++ YD Y +G ++ + + + +R L D+G +FYA
Sbjct: 231 VLLFWPQGLSINGGEYDNIYQSGYFVGDFDGKEFKLDDGQ-----FREL--DFGFDFYAP 283
Query: 313 KTFFDSRKNRRILWGWANESDSTFD--DMAKGWAGVQTIPREVWLDGSGKQLLQWPIEEL 370
+TF D RRIL GW D T + + +GW G T+PRE+ L+ +L Q P+ EL
Sbjct: 284 QTFLD-PDGRRILIGWMGNWDYTNNYPTIDEGWRGAMTLPRELTLEDG--KLYQTPVREL 340
Query: 371 ETLRGKNVHISNQELKKGHHVEV-KGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEH 429
E+LR N L +E+ G E+ L D
Sbjct: 341 ESLRKPEEAAHNTTLSGNSKLELPSGDA-----YELDLDLIWTDATSFG----------- 384
Query: 430 LCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEG 489
L ++G + G LTL + FT + E
Sbjct: 385 LELRMGLNLVGYDVENETLTLDRSDSPLFTVQD-----------------GETRECFIEN 427
Query: 490 LYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPT 537
K+ LR +D+S VE F G+ TSR++PT
Sbjct: 428 GA---------------KVHLRIFVDNSSVEIFINDGEKVFTSRIFPT 460
|
Length = 486 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 184 bits (470), Expect = 2e-52
Identities = 113/351 (32%), Positives = 158/351 (45%), Gaps = 53/351 (15%)
Query: 47 HRTAFHFQPPKHWINGP---MYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALE 103
R FH QP +N P +Y+KG YHLFYQ+ P G V G W H SKDL++WE
Sbjct: 13 WRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEG 72
Query: 104 PALYPSKPFDINGCWSGSATVLPGNKPIILYTG-VDHKERQVQNYAVPANPSDPYLRKWI 162
AL P P+D +GC+SGSA V + ++YTG V + ++Y A D
Sbjct: 73 VALAPDDPYDSHGCYSGSA-VDNNGQLTLMYTGNVRDSDWNRESYQCLATMDD---DGHF 128
Query: 163 KPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR-RKHRGMAYLYRSRDFMKWT 221
+ V+ P + FRDP W ++GHW M++G++ +G LYRS+D WT
Sbjct: 129 EKFGIVVIELPPAGYTAHFRDPKV--WKHNGHWYMVIGAQTETEKGSILLYRSKDLKNWT 186
Query: 222 KAKHPIHSLANTG------MWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVS---LDLT 272
I G MWECPD + + + + VL S LD +
Sbjct: 187 -FVGEILGDGQNGLDDRGYMWECPDLFSL---------------DGQDVLLFSPQGLDAS 230
Query: 273 RYDY-------YTIGTYNRDKDRYVPDKDSVDGWRGLRYDYG-NFYASKTFFDSRKNRRI 324
YDY Y +G + + + + DYG +FYA +TF RRI
Sbjct: 231 GYDYQNIYQNGYIVGQLDYEAPEFTHGTEF------HELDYGFDFYAPQTFLAP-DGRRI 283
Query: 325 LWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRG 375
L W + + GWA T+PRE L +L+Q P+ EL+ LR
Sbjct: 284 LVAWMGLPEIDYPTDRDGWAHCMTLPRE--LTLKDGKLVQTPLRELKALRT 332
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 171 bits (435), Expect = 4e-49
Identities = 74/306 (24%), Positives = 102/306 (33%), Gaps = 38/306 (12%)
Query: 63 PMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAL----YPSKPFDINGCW 118
+ Y G Y++F+ + K GN AH+ SKDL+NW AL P D G W
Sbjct: 5 LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIW 61
Query: 119 SGSATVLPGNKPIILYTGVD-HKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVN 177
+ S + K + YT V K +Q A + + P+ P P +
Sbjct: 62 APSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYIGGPVLPD---NPPAAD 118
Query: 178 ASAFRDPTTAWWSNDGHWRMLVGSRRKHR-GMAYLYRSRDFMKW--TKAKHPIHSLANTG 234
S FRDP +DG W ++ GS H G +LY S D W A+ I
Sbjct: 119 VSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELLISEGEGGK 177
Query: 235 MWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTR------YDYYTIGTYNRDKDR 288
E P N K+ L S++ T Y +
Sbjct: 178 QIEGPGLLKK---------------NGKYYLFYSINGTGRVDSTYSIGYARSESDTGPYV 222
Query: 289 YVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQT 348
D G Y + F D+ R +L A D GW
Sbjct: 223 PKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYA-DAPTYGWGRSLA 280
Query: 349 IPREVW 354
IPR +W
Sbjct: 281 IPRLLW 286
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 1e-22
Identities = 77/293 (26%), Positives = 115/293 (39%), Gaps = 42/293 (14%)
Query: 63 PMYYKGIYHLFYQYNPKGAV--WGNIVWAHSVSKDLINWEALEPALYPSKPFDIN-GCWS 119
P Y G +H+FY ++P+ W+ +KDL+N+E A+ D + +
Sbjct: 5 PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGT 64
Query: 120 GSATVLPGNKPIILYTG--VDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVN 177
GS G YTG +D K +QV +A SD L W K ++ G
Sbjct: 65 GSVIKGEGTY-HAFYTGHNLDGKPKQVVMHAT----SDD-LITWTKDPEFILIADGEGYE 118
Query: 178 ASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGMAYLYRSRDFMKWTKAKHPIHSLAN 232
+ +RDP W +G + ML+ +R RG L+ S+D W + P ++
Sbjct: 119 KNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWEYEE-PFYAPGL 177
Query: 233 TGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPD 292
M ECPD + + L ++ +E T Y + + PD
Sbjct: 178 YFMPECPDLF--KMGDWWYL--VYSEFSENRK-------THYRV----SKSPFGPWRAPD 222
Query: 293 KDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAG 345
D+ DG R FYA+KT D RR L+GW DD W G
Sbjct: 223 DDTFDG-RA-------FYAAKTASD--GTRRFLFGWVPTKAGNDDDGNWEWGG 265
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 3e-15
Identities = 70/283 (24%), Positives = 92/283 (32%), Gaps = 42/283 (14%)
Query: 67 KGIYHLFYQYNPKGAVWGNIVW-AHSVSKDLINWEALEPALYPSKP--FDINGCWSGSAT 123
G YHLFY P+G GN + S D W L P P FD G W+ S
Sbjct: 13 VGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVV 72
Query: 124 VLPGNKPIILYTGVD--HKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNAS-- 179
P + YTG D Q A + L W K NPV N
Sbjct: 73 RDPDGTYRMFYTGYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNPGPW 127
Query: 180 ---AFRDPTTAWWSNDGHWRMLVGSRRKH-RGMAYLYRSRDFMKWTKAKHPIHSLANT-- 233
A+RDP G WRM G+R RG L S D + WT P
Sbjct: 128 DDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDD 187
Query: 234 GMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVS-LDLTRYDYYTIGTYNRDKDRYVPD 292
G E P + + ++ L S + Y +GT R +
Sbjct: 188 GQLEVPQVVKI---------------DGRWYLLYSGRNEDAKTGYRVGTALFGPGRPLTL 232
Query: 293 KDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDST 335
+ + D + YA++ D +L G+ DS
Sbjct: 233 AELL--------DRTDLYAARPVPDGEGGGVVLEGFVQFGDSG 267
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
| >gnl|CDD|219762 pfam08244, Glyco_hydro_32C, Glycosyl hydrolases family 32 C terminal | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 9e-14
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 444 PFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDL 503
FGLL AS + E T + + K L+ D S+S G++K F V
Sbjct: 8 SFGLLLRASNDGSEQTLIGYD------KSKGLLTVDRSNSG---NGVFKEKFGSGVRAAP 58
Query: 504 --SDKKLSLRSLIDHSVVESFGAGG 526
LSLR +D S VE F G
Sbjct: 59 LPEKDTLSLRIFVDRSSVEVFANDG 83
|
This domain corresponds to the C terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module. Length = 83 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 574 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.94 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.88 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.81 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.8 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.77 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.73 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.69 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.61 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.58 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.56 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.53 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.49 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.47 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.46 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.34 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.34 | |
| PF08244 | 86 | Glyco_hydro_32C: Glycosyl hydrolases family 32 C t | 99.3 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.3 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.27 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 99.2 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.2 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.14 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 99.11 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 99.04 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.04 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 99.01 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.95 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.93 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 98.91 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.9 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.87 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.79 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.7 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.65 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.56 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 98.54 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.53 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.49 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.45 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.41 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.41 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.34 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.33 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.2 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 98.14 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 98.13 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.12 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 98.11 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.11 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 98.07 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 97.96 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 97.89 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 97.87 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.74 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 97.68 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.66 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 97.65 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.64 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.59 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 97.57 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 97.35 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 97.26 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 97.14 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 97.06 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 96.98 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 96.8 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 96.23 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 94.87 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 94.8 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 92.66 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 92.0 | |
| COG3940 | 324 | Predicted beta-xylosidase [General function predic | 85.43 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 83.45 | |
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 82.15 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 81.4 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-108 Score=850.33 Aligned_cols=550 Identities=61% Similarity=1.031 Sum_probs=501.7
Q ss_pred hheeecCCcccccccCCCccccc-hhhhccCcccccceeecCCCceeeeEEECCEEEEEEeeCCCCCCCCccEEEEeecC
Q 008189 16 LWVISNNNGVEASHKIYPEFQSL-AAVKVKQLHRTAFHFQPPKHWINGPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSK 94 (574)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~RP~~H~~p~~gw~Ng~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~ 94 (574)
+.+--+.-++++.|..+-.|++- ++...+.++||.|||+|+.|||||++|++|.|||||||||++..||+.+||||+|+
T Consensus 17 ~~~~~~vk~~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P~~ykG~yHLFyQyNP~gavwg~ivWGHavSk 96 (571)
T KOG0228|consen 17 LNLTNYVKGLDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDPMYYKGKYHLFYQYNPKGAVWGNIVWGHAVSK 96 (571)
T ss_pred HhhhhhhhhhhhhhhhhhhhcccCccccccccCCceeecCCCcccccCccccCcEEEEEEecCCCCceeeeeEeeeecch
Confidence 33333344788999998888776 45557789999999999999999999999999999999999999999999999999
Q ss_pred CcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecC-
Q 008189 95 DLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG- 173 (574)
Q Consensus 95 Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~- 173 (574)
||+||+.+|+||.|++++|..|||||||+++.+|++.++|||.+...+|+|.+|+..|.+|++|+.|.|.+++|++.++
T Consensus 97 DLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~ 176 (571)
T KOG0228|consen 97 DLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDK 176 (571)
T ss_pred hhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeecccc
Confidence 9999999999999999999999999999999999999999999988889999999999999999999999999999877
Q ss_pred -CCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCcc
Q 008189 174 -PDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGL 252 (574)
Q Consensus 174 -~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~ 252 (574)
.+.....||||+++|++++|+|+|++|...+.+|.+.+|+|+|+++|+....|++....++||||||||++..+|++|+
T Consensus 177 V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~ 256 (571)
T KOG0228|consen 177 VLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGL 256 (571)
T ss_pred ccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCc
Confidence 6777899999999999999999999999887889999999999999999988998888899999999999999999998
Q ss_pred ccccCCCCceEEEEEeecCCceeEEEEEEEeCCCCccccCCCCCCCCcceecccCCCccceeeeeCCCCcEEEEEeccCC
Q 008189 253 DTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANES 332 (574)
Q Consensus 253 ~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~fYA~~t~~~~~~gr~i~~gW~~~~ 332 (574)
.++..+...|||+..|...++..+|+||++|+.+.+|+|+..+.+.....+.|||.|||.|||.|..++|||+|||++++
T Consensus 257 d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es 336 (571)
T KOG0228|consen 257 DWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASES 336 (571)
T ss_pred eEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccC
Confidence 87766555699999998888899999999999888999998766543445789999999999999889999999999999
Q ss_pred CCCCCCCCCCccccccccEEEEEec-CCCeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecC
Q 008189 333 DSTFDDMAKGWAGVQTIPREVWLDG-SGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPS 411 (574)
Q Consensus 333 ~~~~~~~~~gW~g~lslPReL~l~~-~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 411 (574)
++..+..+.||+|.|++||+++|+. .|+.|.|.|+.|++.||...+...+..++++...+..++++.+.++|++|++..
T Consensus 337 ~~~~dd~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~ 416 (571)
T KOG0228|consen 337 DYTNDDPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVED 416 (571)
T ss_pred cccccchhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEecc
Confidence 9998889999999999999999997 688999999999999999988766666777888888999999999999999988
Q ss_pred CCcccccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCcc
Q 008189 412 LDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLY 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~ 491 (574)
++++..++.++. +++..|...+.++.++.++||+..+++.|.+|+|.+.|.+.+......+++|.|..+|++. .+.+
T Consensus 417 Leka~~~~~~~t--~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~csd~~~sSl~-~d~~ 493 (571)
T KOG0228|consen 417 LEKAIVIEPSWT--DPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMCSDQSRSSLA-EDNY 493 (571)
T ss_pred cccccccCcccc--ccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecCCcceeEEeccCCCcccc-cccc
Confidence 888888888884 6788898888888999999999999999999999999999986666688899999999987 6778
Q ss_pred ccccceEEEEecCCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCCC
Q 008189 492 KPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569 (574)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~~ 569 (574)
++.+++.+.+.+ .++++||++||+|+||.|+|+|+.++|+|+||..+...+..+++|++|.-.+.|.++.+|+|+.+
T Consensus 494 k~~~~afvdv~~-~~~islr~LiDhsivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v~sl~aw~m~~~ 570 (571)
T KOG0228|consen 494 KPSIGAFVDVYP-HQKISLRSLIDHSIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNVTSLNAWSMKNA 570 (571)
T ss_pred ccceeeEEEecC-CCccchhhhhhhhhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEEEEeehhhcccC
Confidence 899999998877 89999999999999999999999999999999998777889999998888899999999999976
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-94 Score=764.58 Aligned_cols=454 Identities=31% Similarity=0.561 Sum_probs=356.3
Q ss_pred ccccchhhhccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC
Q 008189 34 EFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK 110 (574)
Q Consensus 34 ~~~~~~~~~~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~ 110 (574)
++..++.....++|||.|||+||.|||| |++|++|+|||||||+|+++.||++|||||+|+|||||+++|+||.|+.
T Consensus 15 ~~~~~~~~~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~ 94 (486)
T COG1621 15 ELEKISESVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDD 94 (486)
T ss_pred hHhhhhhhccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCC
Confidence 4556667777799999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CccCCCeEeeeEEEcCCCeeEEEEeeecC----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCee
Q 008189 111 PFDINGCWSGSATVLPGNKPIILYTGVDH----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTT 186 (574)
Q Consensus 111 ~~D~~gv~SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~V 186 (574)
.+|.+||||||||++ +|...+||||+.+ .+.+.||+|+|+|+ .+|+|+.++||+..|+++ +.+||||||
T Consensus 95 ~~d~~g~ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv 167 (486)
T COG1621 95 DYDSHGCYSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKV 167 (486)
T ss_pred ccccCCceeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCcc
Confidence 999999999999985 8999999999865 36789999999995 688887678899888876 899999999
Q ss_pred EEecCCCeEEEEEeeec-CCeeEEEEEEeCCCCCCEEccccccc-CCCCCccccceeEEeccCCCCccccccCCCCceEE
Q 008189 187 AWWSNDGHWRMLVGSRR-KHRGMAYLYRSRDFMKWTKAKHPIHS-LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFV 264 (574)
Q Consensus 187 vw~~~~g~~~M~~g~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~v 264 (574)
+|+ ++++|+|++||+. +..|+|+||+|+||++|++.|++... ...++||||||||+|+.+ +. ..+|+
T Consensus 168 ~w~-~~~~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~--------~~~~p 236 (486)
T COG1621 168 VWD-EGGKWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DV--------LLFWP 236 (486)
T ss_pred ccc-CCCcEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--Cc--------eEEcc
Confidence 898 7889999999987 56789999999999999999976555 345679999999999943 22 23677
Q ss_pred EEEeecC-----CceeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCC--C
Q 008189 265 LKVSLDL-----TRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDST--F 336 (574)
Q Consensus 265 l~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~--~ 336 (574)
+.++.++ ...++|++|+||++ +|.+..+ .+++||+|+ |||||||.++ +||||++|||++|++. .
T Consensus 237 qg~~~~~~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~ 308 (486)
T COG1621 237 QGLSINGGEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNY 308 (486)
T ss_pred eeeecCCCcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCC
Confidence 7777643 35689999999986 6665543 367999999 9999999984 8999999999999987 5
Q ss_pred CCCCCCccccccccEEEEEecCCCeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecCCCccc
Q 008189 337 DDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAE 416 (574)
Q Consensus 337 ~~~~~gW~g~lslPReL~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 416 (574)
++..++|+|||||||||+|+ +| +|+|+|++||++||..+....+..++.. ..+....+.++++++.+..
T Consensus 309 PT~~~~w~~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~------- 377 (486)
T COG1621 309 PTIDEGWRGAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIW------- 377 (486)
T ss_pred CccccCcCccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeec-------
Confidence 66667999999999999996 56 6999999999999998665555555443 2233334444444332211
Q ss_pred ccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccc
Q 008189 417 KFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFA 496 (574)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~ 496 (574)
.....+|+.++.+.. .+.++.. +. .+++||++|... ....+
T Consensus 378 -----------------------~~~~~~~~~l~~~~~-----~~~~~~~---~~---~l~ldR~~s~~f-----~~~~~ 418 (486)
T COG1621 378 -----------------------TDATSFGLELRMGLN-----LVGYDVE---NE---TLTLDRSDSPLF-----TVQDG 418 (486)
T ss_pred -----------------------cccceEEEEeecCcc-----eeccccc---cc---eEEEeccccccc-----cccCC
Confidence 011357788776543 3444332 12 256788887111 11222
Q ss_pred eEEEEecC-CCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCC
Q 008189 497 GFVNVDLS-DKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKK 568 (574)
Q Consensus 497 ~~~~~~~~-~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~ 568 (574)
..+.+.+. ..+++||||||+|+||||+|||+.|+|+|+||.... ++++|.+ .. +.+.+.. ++|.+++
T Consensus 419 ~~r~~~~~~~~~v~l~if~D~ssvEiF~NdGe~v~T~rifp~~~~-~~i~l~~--~~-g~~~~~~-~~~~l~~ 486 (486)
T COG1621 419 ETRECFIENGAKVHLRIFVDNSSVEIFINDGEKVFTSRIFPTPDA-NGISLYS--DQ-GVAVVQN-TIWPLKS 486 (486)
T ss_pred ceeeeccCCCceEEEEEEEeCCeEEEEEcCCceEEEEEecCCCcc-cceEEEc--cC-ceEEEEe-eeeccCC
Confidence 23444333 344899999999999999999999999999998873 3555543 32 2344433 8898874
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-86 Score=718.33 Aligned_cols=414 Identities=32% Similarity=0.557 Sum_probs=326.4
Q ss_pred hhccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCe
Q 008189 41 VKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGC 117 (574)
Q Consensus 41 ~~~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv 117 (574)
...+++|||+|||+|+.|||| |++|++|+||||||++|.++.||++|||||+|+|||||+++|+||.|++.+|..||
T Consensus 7 ~~~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~ 86 (445)
T TIGR01322 7 RALQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGC 86 (445)
T ss_pred hhccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCce
Confidence 345689999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeEEEcCCCeeEEEEeeecC----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC
Q 008189 118 WSGSATVLPGNKPIILYTGVDH----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG 193 (574)
Q Consensus 118 ~SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g 193 (574)
|||||++ .+|+++|||||+.. .+.+.|++|+|.|+ .+|+|+. +|||.+++.....+||||+| |+ .+|
T Consensus 87 ~sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g 157 (445)
T TIGR01322 87 YSGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNG 157 (445)
T ss_pred EECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECC
Confidence 9999987 58999999999753 24578999999885 6999974 59997644434578999996 55 478
Q ss_pred eEEEEEeeec-CCeeEEEEEEeCCCCCCEEcccccccC-----CCCCccccceeEEeccCCCCccccccCCCCceEEEEE
Q 008189 194 HWRMLVGSRR-KHRGMAYLYRSRDFMKWTKAKHPIHSL-----ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKV 267 (574)
Q Consensus 194 ~~~M~~g~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~-----~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~ 267 (574)
+|||++|++. +..|++.+|+|+||++|++.+.+.... +.+.|||||+||+|+ | ||||++
T Consensus 158 ~~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~ 222 (445)
T TIGR01322 158 HWYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLF 222 (445)
T ss_pred EEEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEE
Confidence 9999999886 456899999999999999998654332 245699999999997 5 899999
Q ss_pred eecCC----------ceeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCC
Q 008189 268 SLDLT----------RYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTF 336 (574)
Q Consensus 268 s~~~~----------~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~ 336 (574)
|..+. ..++|++|+||..+.+|++++. ++++|+|+ |||+|+|.++ +|||||||||++|+...
T Consensus 223 s~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~ 295 (445)
T TIGR01322 223 SPQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDY 295 (445)
T ss_pred eccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCC
Confidence 86531 2368999999977789987643 46899999 9999999975 79999999999998766
Q ss_pred CCCCCCccccccccEEEEEecCCCeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecCCCccc
Q 008189 337 DDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAE 416 (574)
Q Consensus 337 ~~~~~gW~g~lslPReL~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 416 (574)
++.+.+|+|+|||||+|+|+ +| +|+|+|++||++||..... . .. ......+.+.. .+++|+++++.
T Consensus 296 ~~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~~--~-~~-~~~~~~~~~~~-~~~~l~~~~~~------- 361 (445)
T TIGR01322 296 PTDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEHI--N-VF-GDQEHTLPGLN-GEFELILDLEK------- 361 (445)
T ss_pred CCccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCccc--c-cc-ccccccccCCC-ceEEEEEEecC-------
Confidence 66678999999999999997 57 7999999999999986542 0 11 11111122222 23444433311
Q ss_pred ccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccc
Q 008189 417 KFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFA 496 (574)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~ 496 (574)
+....+||.+ .+ .++.+.|.|+..+ +. +++||++++.. ...+
T Consensus 362 -----------------------~~~~~~~l~~-~~--~~~~~~i~~~~~~---~~---l~~dr~~~~~~------~~~~ 403 (445)
T TIGR01322 362 -----------------------DSAFELGLAL-TN--KGEETLLTIDADE---GK---VTLDRRSSGNL------EDYG 403 (445)
T ss_pred -----------------------CCccEEEEEE-eC--CCCeEEEEEECcC---CE---EEEEccCCCCc------CCcc
Confidence 0113688887 44 2457999998653 32 45699887632 1111
Q ss_pred eEEEEec-CCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecC
Q 008189 497 GFVNVDL-SDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPT 537 (574)
Q Consensus 497 ~~~~~~~-~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~ 537 (574)
..+.+.+ .+++++||||||+|+||||||||+.|||+|+||+
T Consensus 404 ~~~~~~~~~~~~~~l~i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 404 GTRSCPLPNTKKVSLHIFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred ceEEEEcCCCCeEEEEEEEECCEEEEEECCCEEEEEEeccCC
Confidence 1222222 3478999999999999999999999999999985
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-82 Score=682.98 Aligned_cols=416 Identities=47% Similarity=0.831 Sum_probs=318.1
Q ss_pred eeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCC
Q 008189 52 HFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGN 128 (574)
Q Consensus 52 H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg 128 (574)
||+|+.|||| |++|++|+||||||++|.++.||+++||||+|+||+||+++|+||.|+..+|..|||||||+++ +|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-PG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-CC
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999999985 77
Q ss_pred eeEEEEeeecCC------CcceE-EEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 008189 129 KPIILYTGVDHK------ERQVQ-NYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGS 201 (574)
Q Consensus 129 ~~~l~YTg~~~~------~~~~q-~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~ 201 (574)
++++||||+... ..+.| +.|.++| +++|+|++++|||.+++++...+||||+|+|+ ++++|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 899999997421 12333 4444444 38999997899998766666789999998777 44799999998
Q ss_pred ec-CCeeEEEEEEeCCCCCCEEccccccc--CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEE
Q 008189 202 RR-KHRGMAYLYRSRDFMKWTKAKHPIHS--LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYT 278 (574)
Q Consensus 202 ~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~--~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~ 278 (574)
+. +..|+|.+|+|+||++|++.+.++.. ...+.|||||+||+|+++| .+.||||++|.++...+.|+
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 76 45799999999999999999865443 2345899999999998544 23599999999876778999
Q ss_pred EEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCC-CCCCCCCCccccccccEEEEEe
Q 008189 279 IGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDS-TFDDMAKGWAGVQTIPREVWLD 356 (574)
Q Consensus 279 vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~-~~~~~~~gW~g~lslPReL~l~ 356 (574)
+|++++. .+|+|+.... ....+++|+|+ |||||+|.+++++|+||||||++++. ....+..+|+|+|||||||+|+
T Consensus 224 ~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999863 4798876421 12345899998 99999999865569999999999974 2233348999999999999995
Q ss_pred -cCCCeEEEcchHHHHhhhcCceeeccceecCcceEEEc--ccccceeEEEEEEEecCCCcccccCCCcccccccccccc
Q 008189 357 -GSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVK--GVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGK 433 (574)
Q Consensus 357 -~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (574)
.+| +|+|+|++||++||... ......+..+....+. ...+.+++|+++++...
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~---------------------- 357 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS---------------------- 357 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeCC----------------------
Confidence 566 79999999999999542 2222223222211111 12344566666654420
Q ss_pred cCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccceEEE--Eec-CCCeEEE
Q 008189 434 IGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVN--VDL-SDKKLSL 510 (574)
Q Consensus 434 ~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~~~--~~~-~~~~~~L 510 (574)
..+..+||.+++++++++.+.|.|+... +. +++||++++.. ......+.+. +.+ .+++++|
T Consensus 358 ------~~~~~~~l~~~~~~~~~~~~~i~~~~~~---~~---l~vdR~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 421 (437)
T smart00640 358 ------GGAGPFGLLVLASEDLSEQTAVYFDVSK---GT---LCLDRRSSGTS----NDEVFKGVRGATVPVDPGETLSL 421 (437)
T ss_pred ------CcceeEEEEEEeCCCCCceEEEEEEcCC---eE---EEEecCCCCCC----cccccccceeeeeecCCCCeEEE
Confidence 0013689999998888889999998653 32 56799766521 1111111121 122 2468999
Q ss_pred EEEEeCCeEEEEcCCC
Q 008189 511 RSLIDHSVVESFGAGG 526 (574)
Q Consensus 511 rIfvD~S~vEvFvNdG 526 (574)
|||||+||||||+|||
T Consensus 422 ri~vD~ssvEvf~ndG 437 (437)
T smart00640 422 RILVDHSSVEIFANGG 437 (437)
T ss_pred EEEEeceEEEEEeCCC
Confidence 9999999999999987
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-71 Score=576.08 Aligned_cols=296 Identities=43% Similarity=0.840 Sum_probs=245.1
Q ss_pred eeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCC
Q 008189 52 HFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGN 128 (574)
Q Consensus 52 H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg 128 (574)
||+|+.|||| |++|++|+||||||++|+++.||+++||||+|+|||||+++|+||.|++.+|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999999986 66
Q ss_pred eeEEEEeeecCCCcceEEEEEecCCCCcccceeeccC-CCceEec-CCCCCCcCccCCeeEEecCCCeEEEEEeeecCCe
Q 008189 129 KPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPD-NNPVVFP-GPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHR 206 (574)
Q Consensus 129 ~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~-~~Pvi~~-~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~ 206 (574)
+++|||||+.+...+.|++|+|.|.+ ++|+|++ ++|||.. |++ ...+||||+|+|. ++++|+|++|++.+..
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 89999999987668999999996653 8999998 4999975 444 6799999998898 4699999999998888
Q ss_pred eEEEEEEeCCCCCCEEcccccccCC-CCCccccceeEEeccCCCCccccccCCCCceEEEEEee----cCCceeEEEEEE
Q 008189 207 GMAYLYRSRDFMKWTKAKHPIHSLA-NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL----DLTRYDYYTIGT 281 (574)
Q Consensus 207 G~i~ly~S~Dl~~W~~~~~~l~~~~-~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~----~~~~~~~Y~vG~ 281 (574)
|+|++|+|+||++|++.+.+..... .+.|||||+||+|+..+.. ....+|||++|. .....+.|++|+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~~-------~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGDG-------TGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTSS-------SEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCcccc-------cceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999986554433 4789999999999954210 012357999998 345789999999
Q ss_pred EeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCC-CCCCCCCccccccccEEEEEecCC
Q 008189 282 YNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDST-FDDMAKGWAGVQTIPREVWLDGSG 359 (574)
Q Consensus 282 ~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~-~~~~~~gW~g~lslPReL~l~~~g 359 (574)
||..+++|+++.. ..+++|+|+ |||+|+|.++.++||||||||+++++. ....+.+|+|+|||||||+|++++
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~~ 301 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDEG 301 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETTS
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEECC
Confidence 9877789987621 268999999 999999999755599999999999874 223368999999999999997644
Q ss_pred CeEEEcc
Q 008189 360 KQLLQWP 366 (574)
Q Consensus 360 ~~L~q~P 366 (574)
.+|+|+|
T Consensus 302 ~~L~q~P 308 (308)
T PF00251_consen 302 GRLYQKP 308 (308)
T ss_dssp SSEEEEE
T ss_pred CeEEEcC
Confidence 5799998
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-63 Score=509.18 Aligned_cols=283 Identities=41% Similarity=0.793 Sum_probs=242.6
Q ss_pred Ccee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEE
Q 008189 58 HWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 58 gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
|||| |++|++|+||||||++|.++.|++++||||+|+||+||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 7999 9999999999999999999999999999999999999999999999988889999999999986449999999
Q ss_pred eeecC---CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEE
Q 008189 135 TGVDH---KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAY 210 (574)
Q Consensus 135 Tg~~~---~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ 210 (574)
||+.. .+.+.|++|+|+|. +++|+|...+|++.+ +.....+||||+|++. +|+|+|+++++. +..|+|.
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99864 46789999999853 389999988888863 3335679999997665 499999999986 3568999
Q ss_pred EEEeCCCCCCEEccccc-ccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC------ceeEEEEEEEe
Q 008189 211 LYRSRDFMKWTKAKHPI-HSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT------RYDYYTIGTYN 283 (574)
Q Consensus 211 ly~S~Dl~~W~~~~~~l-~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~------~~~~Y~vG~~d 283 (574)
+|+|+||.+|++.+.+. .....+.|||||+||+++++ .||||++|.+.. ..+.|++|+++
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999987542 23345679999999999842 299999998643 45799999999
Q ss_pred CCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCCeE
Q 008189 284 RDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQL 362 (574)
Q Consensus 284 ~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~~L 362 (574)
+. .|+++.. ..+++|+|+ |||+|+|.++ ++|+||||||++++...+..+.+|+|+|||||||+|++++ +|
T Consensus 221 ~~--~~~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~-~l 291 (298)
T cd08996 221 GT--TFTFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG-RL 291 (298)
T ss_pred CC--CCeEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-EE
Confidence 75 6765421 257899998 9999999986 7999999999999987777889999999999999999765 79
Q ss_pred EEcchHH
Q 008189 363 LQWPIEE 369 (574)
Q Consensus 363 ~q~Pv~e 369 (574)
.|+|++|
T Consensus 292 ~~~P~~e 298 (298)
T cd08996 292 YQRPVRE 298 (298)
T ss_pred EEEeCCC
Confidence 9999975
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-54 Score=440.17 Aligned_cols=264 Identities=26% Similarity=0.426 Sum_probs=220.6
Q ss_pred eeEEECCEEEEEEeeCCCCCCC--CccEEEEeecCCcCCceecccccCC-CCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVW--GNIVWAHSVSKDLINWEALEPALYP-SKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~--g~~~Wgha~S~Dlv~W~~~~~al~P-~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.++|++|+||||||++|.++.| ++++||||+|+||+||+++++||.| +..+|..|||||||++ .+|+++|||||+.
T Consensus 4 ~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~YTg~~ 82 (280)
T cd08995 4 MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFYTGHN 82 (280)
T ss_pred cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEEEEEC
Confidence 4789999999999999999888 8999999999999999999999988 4567789999999987 4899999999986
Q ss_pred CC--CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEEEE
Q 008189 139 HK--ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGMAYL 211 (574)
Q Consensus 139 ~~--~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~~G~i~l 211 (574)
.. ..+.|++|+|+|+ ++|+|...+||+.++.++...+||||+|++.+.+|+|||+++++. +..|+|.+
T Consensus 83 ~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~ 157 (280)
T cd08995 83 LDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIAL 157 (280)
T ss_pred CCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEE
Confidence 42 4678999999885 799998778988755555667899999776645799999999875 35689999
Q ss_pred EEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC-CceeEEEEEEEeCCCCccc
Q 008189 212 YRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL-TRYDYYTIGTYNRDKDRYV 290 (574)
Q Consensus 212 y~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d~~~~~F~ 290 (574)
|+|+||++|++.+ ++.....+.|||||++|+++ | +|||++|.+. .....|++|+.. .+.|.
T Consensus 158 ~~S~Dl~~W~~~~-~~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~--~g~~~ 219 (280)
T cd08995 158 FTSKDLKNWEYEE-PFYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP--FGPWR 219 (280)
T ss_pred EEeCCcCcceecC-ceecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--CCCeE
Confidence 9999999999986 45444456799999999997 5 9999999763 356789999622 24564
Q ss_pred cCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCC
Q 008189 291 PDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGK 360 (574)
Q Consensus 291 ~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~ 360 (574)
... ...+| |+ |||||+|.++ |||||||||++++...++.+.+|+|||| ||||.+.+||.
T Consensus 220 ~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g~ 279 (280)
T cd08995 220 APD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDGT 279 (280)
T ss_pred cCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCCc
Confidence 322 23589 99 9999999985 9999999999998877777899999998 78888887773
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=316.72 Aligned_cols=243 Identities=27% Similarity=0.362 Sum_probs=192.2
Q ss_pred cee-eeEEECCEEEEEEeeCCCCCCCC-ccEEEEeecCCcCCceeccccc--CCCCCccCCCeEeeeEEEcCCCeeEEEE
Q 008189 59 WIN-GPMYYKGIYHLFYQYNPKGAVWG-NIVWAHSVSKDLINWEALEPAL--YPSKPFDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 59 w~N-g~~~~~G~yHlfyq~~P~~~~~g-~~~Wgha~S~Dlv~W~~~~~al--~P~~~~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
..| +.+. |+||||||++|.+..++ ..+|+||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++|||
T Consensus 6 ~~~~~~~~--g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Y 83 (276)
T cd08979 6 VFNPAVVV--GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFY 83 (276)
T ss_pred ccCCceEe--eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEE
Confidence 345 4444 99999999999987643 5568999999999999999887 5667788899999999986449999999
Q ss_pred eeecC--CCcceEEEEEecCCCCcccceeeccCCCceE-----ecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCe
Q 008189 135 TGVDH--KERQVQNYAVPANPSDPYLRKWIKPDNNPVV-----FPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHR 206 (574)
Q Consensus 135 Tg~~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi-----~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~ 206 (574)
|+... ...+.+++|+|+|+ ++|+|...+|++ ..+.......+|||+|++.+.+|+|+|++++.. +..
T Consensus 84 t~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~ 158 (276)
T cd08979 84 TGYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADER 158 (276)
T ss_pred ecccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCC
Confidence 99863 45688999999985 799998666653 222333457899999776633499999999875 345
Q ss_pred eEEEEEEeCCCCCCEEccccc--ccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC-CceeEEEEEEEe
Q 008189 207 GMAYLYRSRDFMKWTKAKHPI--HSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL-TRYDYYTIGTYN 283 (574)
Q Consensus 207 G~i~ly~S~Dl~~W~~~~~~l--~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d 283 (574)
++|.+|+|+||.+|++.+.+. .......++|||++|+++ | +|||+++... ...+.|.+|.++
T Consensus 159 ~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~ 223 (276)
T cd08979 159 GAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTAL 223 (276)
T ss_pred cEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEecc
Confidence 789999999999999987531 222345799999999997 5 8999999764 456899999977
Q ss_pred CCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCC
Q 008189 284 RDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANES 332 (574)
Q Consensus 284 ~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~ 332 (574)
.. .|.|.. ...+|.|+ |||+|++.+..++|++++|||+++
T Consensus 224 ~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 224 FG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred cC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 53 565532 35689999 999999987546999999999987
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=289.40 Aligned_cols=265 Identities=28% Similarity=0.400 Sum_probs=201.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC----CCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY----PSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~----P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.+++++|+||||||++|.+ +.++|+|++|+||+||++++.++. |...++..++|+|+++...+|+++||||+.
T Consensus 4 ~i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~yt~~ 80 (286)
T cd08772 4 NLIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLYYTDV 80 (286)
T ss_pred eEEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEEEEee
Confidence 3678999999999999875 678999999999999999998884 667777889999999986449999999998
Q ss_pred cC-CCcceEEEEEecCCCCcccceeeccCCCceEec-CCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEEe
Q 008189 138 DH-KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP-GPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYRS 214 (574)
Q Consensus 138 ~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~-~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~S 214 (574)
.. ...+.+++|+|+|.. ..|++...+||+.. +.......+|||+|++. ++|+|||++++.. +..+.|.+++|
T Consensus 81 ~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d-~dG~~y~~~~~~~~~~~~~i~~~~s 155 (286)
T cd08772 81 SFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYES 155 (286)
T ss_pred cCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEEc-CCCCEEEEEccccCCCCCeEEEEEc
Confidence 53 356789999998864 45666545566542 22234568999996544 5699999999764 23567999999
Q ss_pred CCCCCCEEcccc-c-ccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC------CceeEEEEEEEeCCC
Q 008189 215 RDFMKWTKAKHP-I-HSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL------TRYDYYTIGTYNRDK 286 (574)
Q Consensus 215 ~Dl~~W~~~~~~-l-~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~------~~~~~Y~vG~~d~~~ 286 (574)
+|+.+|...+.+ + .......++|||++|+++ | +|+|++|... .....|++++.+ .
T Consensus 156 ~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~~~--~ 218 (286)
T cd08772 156 DDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSESD--T 218 (286)
T ss_pred CCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEccCC--C
Confidence 999999876643 1 223346799999999997 5 8999999754 345678888743 3
Q ss_pred CccccCCCCCC-CCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEE
Q 008189 287 DRYVPDKDSVD-GWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREV 353 (574)
Q Consensus 287 ~~F~~~~~~~d-~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL 353 (574)
++|.+.....- .......|.+. +||+++|.++ +||++|++|+.+++.... ...+|+++|+|||+|
T Consensus 219 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~ 285 (286)
T cd08772 219 GPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLL 285 (286)
T ss_pred CCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccccccc
Confidence 56765432100 00123456777 9999999986 799999999999876433 567999999999987
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-25 Score=228.62 Aligned_cols=263 Identities=17% Similarity=0.207 Sum_probs=168.1
Q ss_pred EEECCEEEEEEeeCCCC----CCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 64 MYYKGIYHLFYQYNPKG----AVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 64 ~~~~G~yHlfyq~~P~~----~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
+-++|..-+|++..|.. +.|+.+||||++|+||+||++.+ ++.|+..+|.+|||||||++..+|+++|||||+.+
T Consensus 15 ~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~ 93 (349)
T cd08997 15 ASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQLFYTAVGR 93 (349)
T ss_pred EEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEEEEecccc
Confidence 44677433999887764 46899999999999999999955 46688889999999999998667999999999853
Q ss_pred ----CCcceEEEEEecCCCC-cccceeeccCCCceEecC--------------CCCCCcCccCCeeEEecCCCeEEEEEe
Q 008189 140 ----KERQVQNYAVPANPSD-PYLRKWIKPDNNPVVFPG--------------PDVNASAFRDPTTAWWSNDGHWRMLVG 200 (574)
Q Consensus 140 ----~~~~~q~lA~s~D~~d-~~l~~w~k~~~~Pvi~~~--------------~~~~~~~fRDP~Vvw~~~~g~~~M~~g 200 (574)
.+...|++|.+++... --+..|.+. .+++.++ +.....+||||+|+..+++|+|||+++
T Consensus 94 ~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~--~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfe 171 (349)
T cd08997 94 KGEPQPTFTQRLALARGTLSVVNLSGFEDH--HELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFE 171 (349)
T ss_pred CCCCCCCceEEEEEEECCCcceEecccCcc--ceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEE
Confidence 2457788887765420 001233322 2444321 112357899999755434799999999
Q ss_pred eecC-C---------------------------eeEEEEE--EeCCCCCCEEcccccccCC-CCCccccceeEEeccCCC
Q 008189 201 SRRK-H---------------------------RGMAYLY--RSRDFMKWTKAKHPIHSLA-NTGMWECPDFYPVSISGK 249 (574)
Q Consensus 201 ~~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~l~~~~-~~~~wEcPdlf~l~~~g~ 249 (574)
+... . .|+|.++ +|+||.+|++.+ ||.... -...||||++|+++ |
T Consensus 172 ant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~-PL~~a~~v~d~~E~P~v~~~~--g- 247 (349)
T cd08997 172 GNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLP-PLLEANGVNDELERPHVVFHN--G- 247 (349)
T ss_pred eccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcC-ccccCCCcCCceEcceEEEEC--C-
Confidence 8752 2 3666666 677999999986 555432 24579999999997 6
Q ss_pred CccccccCCCCceEEEEEeecCC---------ceeEEEEEE-EeCCCCccccCCCCCCCCcceeccc--CCCccceeeee
Q 008189 250 NGLDTSFAGGNEKFVLKVSLDLT---------RYDYYTIGT-YNRDKDRYVPDKDSVDGWRGLRYDY--GNFYASKTFFD 317 (574)
Q Consensus 250 ~~~~~~~~~~~~k~vl~~s~~~~---------~~~~Y~vG~-~d~~~~~F~~~~~~~d~~~~~~lD~--G~fYA~~t~~~ 317 (574)
||+|++|.... ...++++++ +. +.|.|-+.. ...+-- -.-|.+++..-
T Consensus 248 ------------k~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~---GP~~~~n~s-----glvl~~p~~~~~~~ys~~~ 307 (349)
T cd08997 248 ------------KYYLFTISHRSTFAPGLSGPDGLYGFVSDSLR---GPYKPLNGS-----GLVLGNPTDAPFQTYSWYV 307 (349)
T ss_pred ------------EEEEEEeCCcCccccccCCCCcEEEEEeCCCC---CCCccCCCC-----cceeCCCCCCccccceEEE
Confidence 99999885332 134555664 33 466654321 011100 01233444433
Q ss_pred CCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEec
Q 008189 318 SRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDG 357 (574)
Q Consensus 318 ~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~ 357 (574)
.+ .-++...|.+..... ......|.++-.=.|.|+.
T Consensus 308 ~p--~~lv~Sfid~~~~~~--~~~~~~gT~aPt~~l~~~g 343 (349)
T cd08997 308 MP--NGLVTSFIDNVGFAD--GGSRFGGTLAPTLKLNLKG 343 (349)
T ss_pred EC--CCEEEEEecccCCcc--cccccCCeeCCeEEEEEcC
Confidence 33 335556677765322 1234566666444555543
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=201.74 Aligned_cols=187 Identities=20% Similarity=0.301 Sum_probs=137.2
Q ss_pred ceeecCCCcee--eeEEE-CCEEEEEEeeCCCCCC---C-CccEEEEeecCCcC-CceecccccCCC--CCccCCCeEee
Q 008189 51 FHFQPPKHWIN--GPMYY-KGIYHLFYQYNPKGAV---W-GNIVWAHSVSKDLI-NWEALEPALYPS--KPFDINGCWSG 120 (574)
Q Consensus 51 ~H~~p~~gw~N--g~~~~-~G~yHlfyq~~P~~~~---~-g~~~Wgha~S~Dlv-~W~~~~~al~P~--~~~D~~gv~SG 120 (574)
.+|..+..++. .++.. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ ..||..+++++
T Consensus 4 ~~~~~~~~~~w~~~vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~P 83 (291)
T cd08994 4 SGLEDEDYSVWGGSIIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHNP 83 (291)
T ss_pred ceeeeCCeEEEecceEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccCC
Confidence 45677777777 55554 4799999999887643 2 23569999999987 899999999887 46888999999
Q ss_pred eEEEcCCCeeEEEEeeecC-------CCcceEEEEEecCCCCcccceeeccCCCceEec-C-----------------C-
Q 008189 121 SATVLPGNKPIILYTGVDH-------KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP-G-----------------P- 174 (574)
Q Consensus 121 sav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~-~-----------------~- 174 (574)
+++.. +|+++||||+... ...+.+++|+|++.. .+|++. .+||+.+ + .
T Consensus 84 ~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~g 157 (291)
T cd08994 84 TIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPDG 157 (291)
T ss_pred eEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCCC
Confidence 99874 8999999999753 234667788887632 356664 3455421 0 0
Q ss_pred ------------------------------------------CCCCcCccCCeeEEecCCCeEEEEEeeecC----CeeE
Q 008189 175 ------------------------------------------DVNASAFRDPTTAWWSNDGHWRMLVGSRRK----HRGM 208 (574)
Q Consensus 175 ------------------------------------------~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~----~~G~ 208 (574)
......+|||+| |+ .+|+|||+++++.+ ..++
T Consensus 158 ~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~~ 235 (291)
T cd08994 158 SYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKGG 235 (291)
T ss_pred CEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCce
Confidence 001245789995 66 46999999998753 4678
Q ss_pred EEEEEeCCCCCCEEcccccc----c--C---CCCCccccceeE-Eec
Q 008189 209 AYLYRSRDFMKWTKAKHPIH----S--L---ANTGMWECPDFY-PVS 245 (574)
Q Consensus 209 i~ly~S~Dl~~W~~~~~~l~----~--~---~~~~~wEcPdlf-~l~ 245 (574)
+.+|+|+|+.+|++.+.++. . . ....+||||+++ +.+
T Consensus 236 i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 236 GAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred EEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 99999999999999875532 1 1 135799999999 776
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.8e-19 Score=178.89 Aligned_cols=146 Identities=18% Similarity=0.249 Sum_probs=114.4
Q ss_pred e-eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecc-cccCC--CCCccCCCeEeeeEEEcCCCeeEEEEee
Q 008189 61 N-GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALE-PALYP--SKPFDINGCWSGSATVLPGNKPIILYTG 136 (574)
Q Consensus 61 N-g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~-~al~P--~~~~D~~gv~SGsav~~~dg~~~l~YTg 136 (574)
| ++++++|+||||||.++.. +.++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+||+
T Consensus 2 nP~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yta 77 (268)
T cd08993 2 NPAVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYAA 77 (268)
T ss_pred cCeEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEEc
Confidence 6 7899999999999987643 57899999999999999875 34556 5677889999999987 59999999999
Q ss_pred ecC-CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec-CCCeEEEEEeeec---CCeeEEEE
Q 008189 137 VDH-KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS-NDGHWRMLVGSRR---KHRGMAYL 211 (574)
Q Consensus 137 ~~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~-~~g~~~M~~g~~~---~~~G~i~l 211 (574)
... ...+++++|.|+|+ ++|+|.. . ++. ...||+++ |.+ .+|+|+|++.... +..+.|.+
T Consensus 78 ~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~~-------~~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I~l 142 (268)
T cd08993 78 RPNAPNGTRIGLATTKDF-----ITFERLG-T-SLV-------PNNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDMWL 142 (268)
T ss_pred cCCCCCCcEEEEEEeCCc-----ceEEEec-c-cCC-------CCCCCEEE-eeEEECCEEEEEEccccCCCCCCCcEEE
Confidence 763 34578999999885 8999973 2 111 12478884 432 4899999996442 24568999
Q ss_pred EEeCCCCCCEEccc
Q 008189 212 YRSRDFMKWTKAKH 225 (574)
Q Consensus 212 y~S~Dl~~W~~~~~ 225 (574)
++|+||.+|+..+.
T Consensus 143 A~S~Dl~~W~~~~~ 156 (268)
T cd08993 143 SFSPDLVHWGNHRF 156 (268)
T ss_pred EECCCcCccCCCeE
Confidence 99999999987653
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=178.82 Aligned_cols=158 Identities=17% Similarity=0.278 Sum_probs=121.7
Q ss_pred eeEEECCEEEEEEeeCCCCC--CCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGA--VWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~--~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
-+++++|+||||||++|..+ .++.++|+||+|+||++|++.++++.+ ..++++++++.+.+|+++||||+..
T Consensus 83 ~v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~~-----~~~~iD~~vf~~~dg~~yl~y~~~~- 156 (294)
T cd08984 83 EVVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDLD-----SDRVIDACVFKLPDGRWRMWYKDER- 156 (294)
T ss_pred eEEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccccC-----CCCcEEeEEEEeCCCEEEEEEECCC-
Confidence 57889999999999998753 346789999999999999998876322 3578999999866799999999853
Q ss_pred CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCC
Q 008189 140 KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMK 219 (574)
Q Consensus 140 ~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~ 219 (574)
....+++|.|+|. .+|++. .+++.. ...++|+| |+ .+|+|||+++. ..| +.+|+|+|+.+
T Consensus 157 -~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~~S~D~~~ 216 (294)
T cd08984 157 -RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKGYYWMIIDE---WKG-LGVYRSKDAEN 216 (294)
T ss_pred -CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECCEEEEEEcC---Cce-EEEEECCChhh
Confidence 2345688998885 799985 466642 23489996 45 47999999854 234 67999999999
Q ss_pred CEEcccccccC----CCCCccccceeEEec
Q 008189 220 WTKAKHPIHSL----ANTGMWECPDFYPVS 245 (574)
Q Consensus 220 W~~~~~~l~~~----~~~~~wEcPdlf~l~ 245 (574)
|++.+.++... ....+++||++++.+
T Consensus 217 W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 217 WERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred cEECCeeeccCCCCccccccccCCcEEEeC
Confidence 99988665432 124467999999876
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=169.49 Aligned_cols=188 Identities=16% Similarity=0.230 Sum_probs=136.2
Q ss_pred Ccee--eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCC-CCccCCCeEeeeEEEcCCCeeEEEE
Q 008189 58 HWIN--GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPS-KPFDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 58 gw~N--g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~-~~~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
||+. .+++++|+||||++..+.+. ...+|.+++|+||+||+.++.+|.+. ..++..++|+++++.. +|+++|||
T Consensus 6 g~~~DP~i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~~-~g~yy~yy 82 (275)
T cd09004 6 GWYADPEIRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIER-NGKYYFYF 82 (275)
T ss_pred CCCCCCCeEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEEE-CCEEEEEE
Confidence 4555 67889999999998765432 25679999999999999999998764 4566789999999874 89999999
Q ss_pred eeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEE-EE
Q 008189 135 TGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYL-YR 213 (574)
Q Consensus 135 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~l-y~ 213 (574)
|+. +.+++|+|++.. -.|++..++|++.... .....+||.|+ .+.+|+|||++++. +.+.+ -.
T Consensus 83 s~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~----~~~~i~~l 146 (275)
T cd09004 83 SAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW----GHCNVAKL 146 (275)
T ss_pred EcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc----CCEEEEEE
Confidence 986 367899998864 4688744678875432 12568999965 44689999999864 12333 34
Q ss_pred eCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEE
Q 008189 214 SRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIG 280 (574)
Q Consensus 214 S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 280 (574)
|+|+.+|......+ ......+.|||.+|+.+ | +++|++|........|.+|
T Consensus 147 ~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 147 NEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred CCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 78898886443221 12234589999999987 5 8999998754332344444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=161.55 Aligned_cols=189 Identities=19% Similarity=0.200 Sum_probs=131.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC-ccCCCeEeeeEEEcCCCeeEEEEeeecCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP-FDINGCWSGSATVLPGNKPIILYTGVDHK 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 140 (574)
.+++++|+|+||+..... .+|++++|+||+||+.++.+|.+... ++..++|.++++. .+|+++|+|++....
T Consensus 12 ~i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~y~~~~~~ 84 (287)
T cd08999 12 SVIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLYYSARDKG 84 (287)
T ss_pred eEEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEEEEeecCC
Confidence 577889999999986532 57999999999999999988877655 4457789998877 489999999998652
Q ss_pred -CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee---EEEEE-EeC
Q 008189 141 -ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRG---MAYLY-RSR 215 (574)
Q Consensus 141 -~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G---~i~ly-~S~ 215 (574)
..+.+++|+|+|.. ..|++.. .+++..+. .....+||.|+ .+++|+|||++++.....+ .+.+. .|+
T Consensus 85 ~~~~~i~~a~s~~p~----g~~~~~~-~~~~~~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~ 156 (287)
T cd08999 85 SGGQCIGVATADSPL----GPFTDHG-KPPLCCPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTPIYLQELSA 156 (287)
T ss_pred CCCEEEEEEECCCCC----CCCccCC-cceEecCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCceEEEEEeCC
Confidence 45567789987753 4688763 34443222 12567999965 4468999999987542211 24443 378
Q ss_pred CCCCCEEcccccccC---CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCce--eEEEEE
Q 008189 216 DFMKWTKAKHPIHSL---ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRY--DYYTIG 280 (574)
Q Consensus 216 Dl~~W~~~~~~l~~~---~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~--~~Y~vG 280 (574)
|+.+|......+... ....++|||.+|+.+ | +|+|++|...... ..|.+|
T Consensus 157 d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~~~~~~~~y~i~ 211 (287)
T cd08999 157 DGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGGCCSGASTYAVG 211 (287)
T ss_pred CCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCCccCCCCCEEEE
Confidence 988886433222211 134589999999986 5 8999998753211 145555
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-15 Score=154.41 Aligned_cols=193 Identities=15% Similarity=0.167 Sum_probs=137.8
Q ss_pred eEEECCEEEEEEeeCCCCCC---CCccEEEEeecCCcCCceecccccCCCC--CccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 63 PMYYKGIYHLFYQYNPKGAV---WGNIVWAHSVSKDLINWEALEPALYPSK--PFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~~~---~g~~~Wgha~S~Dlv~W~~~~~al~P~~--~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
+++++|+||||.......+. .....|..++|+||+||+.++.+|.+.. .++..++|.++++. .+|+++|||++.
T Consensus 5 ~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~yy~~~ 83 (274)
T cd08990 5 AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLYFPAR 83 (274)
T ss_pred cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEEEEee
Confidence 57789999999987655432 2344699999999999999999987543 36778999999987 589999999997
Q ss_pred cCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCC
Q 008189 138 DHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDF 217 (574)
Q Consensus 138 ~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl 217 (574)
.....+.+++|+|+|.. -.|++....|++.... ......||.++ .+.+|++||+++.. .+......|+|+
T Consensus 84 ~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~~l~~d~ 153 (274)
T cd08990 84 DKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVAKLKPDM 153 (274)
T ss_pred cCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcEE-ECCCCCEEEEECCc---CCEEEEEeCccc
Confidence 54345677899998753 4688764445554211 23567899965 44689999999865 222333457899
Q ss_pred CCCEEccccccc-----CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEEE
Q 008189 218 MKWTKAKHPIHS-----LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281 (574)
Q Consensus 218 ~~W~~~~~~l~~-----~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 281 (574)
.+|+.....+.. .......|+|.+++.+ | +++|++|.+......|.+.+
T Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s~ 207 (274)
T cd08990 154 LSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATSD 207 (274)
T ss_pred cccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEcC
Confidence 999754332321 1224568999999987 6 89999998655556666553
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.5e-14 Score=143.72 Aligned_cols=189 Identities=22% Similarity=0.227 Sum_probs=129.3
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC----CCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY----PSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~----P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.+++++|+||||+..... ....+..++|+||++|+.++.++. +....+..++|.++++.. +|+++|+|++.
T Consensus 4 ~v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~y~~~ 78 (271)
T cd08978 4 YILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIYY-EGKYYLYYSVS 78 (271)
T ss_pred cEEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEEE-CCEEEEEEEcc
Confidence 367889999999987643 234689999999999999998875 344455678999999874 79999999997
Q ss_pred cC-CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC--CeeEEEEEEe
Q 008189 138 DH-KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK--HRGMAYLYRS 214 (574)
Q Consensus 138 ~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~--~~G~i~ly~S 214 (574)
.. ...+.+++|+|+|. ..|.+....+. .. ......+||.|+.. ++|++||+++.... ..+.|.++++
T Consensus 79 ~~~~~~~~i~~a~s~d~-----~g~~~~~~~~~---~~-~~~~~~iDp~vf~d-~dg~~yl~~~~~~~~~~~~~i~~~~l 148 (271)
T cd08978 79 DFDYNGSGIGVATSEDP-----TGPFEDKVIRP---PT-SNNGNSIDPTVFKD-DDGKYYLYYGSGDPGAGFGGIYISEL 148 (271)
T ss_pred cCCCCcccEEEEECCCC-----CCCccccccCc---Cc-cCCCCccCcceEEc-CCCCEEEEEecccCCCCCCcEEEEEE
Confidence 53 23467889999886 45554321111 11 12356789996544 67999999987642 2456888888
Q ss_pred CCCCCCEEccccc---ccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEEE
Q 008189 215 RDFMKWTKAKHPI---HSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281 (574)
Q Consensus 215 ~Dl~~W~~~~~~l---~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 281 (574)
++...|.. +.+. .......+.|+|.+|+.+ | +|+|++|........|.++-
T Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~~ 202 (271)
T cd08978 149 TDDLTKPT-GPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIGY 202 (271)
T ss_pred Cccccccc-CCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEEE
Confidence 77555432 2221 112234589999999987 5 89999987543233455553
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=142.30 Aligned_cols=177 Identities=16% Similarity=0.177 Sum_probs=123.5
Q ss_pred eEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC-CccCCCeEeeeEEEcCCCeeEEEEeeecCC-
Q 008189 63 PMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK-PFDINGCWSGSATVLPGNKPIILYTGVDHK- 140 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~~~~- 140 (574)
+++++|+|+||+..... ...+.+++|+||++|+.++.++.+.. .++..++|.++++. .+|+++|||++....
T Consensus 5 v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~~~~~ 78 (294)
T cd08991 5 VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSANDRDE 78 (294)
T ss_pred EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEeccCCC
Confidence 57789999999876543 23588999999999999998887654 37778999999987 489999999997543
Q ss_pred CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC---eeEEEEEEeCCC
Q 008189 141 ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH---RGMAYLYRSRDF 217 (574)
Q Consensus 141 ~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~---~G~i~ly~S~Dl 217 (574)
..+.+++|+|+|.. -.|++... +.+.. .....||.++.. .+|+|||+++..... .+....--|.|+
T Consensus 79 ~~~~i~~a~s~~p~----gp~~~~~~-~~~~~-----~~~~iD~~vf~d-~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~ 147 (294)
T cd08991 79 KTEHIGVAVSDSPL----GPFRDIKK-PPIDF-----EPKSIDAHPFID-DDGKPYLYYSRNNYGNRVSDIYGTELVDDK 147 (294)
T ss_pred CcceEEEEEeCCCC----CCCCcCCC-CcccC-----CCcccCCceEEC-CCCCEEEEEEecCCCCcccceEEEEEccce
Confidence 45678899998753 46776432 22221 134679996544 679999999865321 233344457888
Q ss_pred CCCEEccc----ccccC--------------CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 218 MKWTKAKH----PIHSL--------------ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 218 ~~W~~~~~----~l~~~--------------~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.+|..... ++..+ ....+.|+|.+++.+ | +|+|++|...
T Consensus 148 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 148 LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred eeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 77752110 11110 123478999999997 5 8999998643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-13 Score=143.57 Aligned_cols=167 Identities=16% Similarity=0.248 Sum_probs=119.2
Q ss_pred ccceeecCCCcee----eeEEECCEEEEEEeeCCC-----------CC--CCCccEEEEeecCCcCCceecccccCCC--
Q 008189 49 TAFHFQPPKHWIN----GPMYYKGIYHLFYQYNPK-----------GA--VWGNIVWAHSVSKDLINWEALEPALYPS-- 109 (574)
Q Consensus 49 P~~H~~p~~gw~N----g~~~~~G~yHlfyq~~P~-----------~~--~~g~~~Wgha~S~Dlv~W~~~~~al~P~-- 109 (574)
|..-+.+..+... .+++.+|+|||||++... .+ .|....++||+|+||+||++++.+|.+.
T Consensus 25 p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~~ 104 (349)
T cd08992 25 PKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGEK 104 (349)
T ss_pred cccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCCC
Confidence 3444444444443 266789999999996532 11 2456789999999999999999888754
Q ss_pred CCccCCCeEeeeEEEcCCCeeEEEEeeecCC----CcceEEEEEecCCCCcccceeeccCCCceEecCC-----------
Q 008189 110 KPFDINGCWSGSATVLPGNKPIILYTGVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGP----------- 174 (574)
Q Consensus 110 ~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~----------- 174 (574)
..||..++|.++++. .+|+++|||++.... ..+.+++|+|++.. ..|++. .+||+.+..
T Consensus 105 g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~~ 178 (349)
T cd08992 105 GAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDNR 178 (349)
T ss_pred CCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCce
Confidence 358999999999986 599999999986431 23567899998763 359886 689985421
Q ss_pred -------CCCCcCccCCeeEEecCCCeEEEEEeeecC--------CeeEEEEEEeCCCC-CCEEc
Q 008189 175 -------DVNASAFRDPTTAWWSNDGHWRMLVGSRRK--------HRGMAYLYRSRDFM-KWTKA 223 (574)
Q Consensus 175 -------~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~--------~~G~i~ly~S~Dl~-~W~~~ 223 (574)
.++...+.||.|+ + .+|+|||++.+... ..-++.++.|++.. -|+..
T Consensus 179 ~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 179 FLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 1455667899965 4 48999999966431 12368899998875 57654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.9e-13 Score=136.55 Aligned_cols=174 Identities=22% Similarity=0.243 Sum_probs=119.8
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC-------ccCCCeEeeeEEEcCCCeeEEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP-------FDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
.+++++|+||||+... ++++++|+||+||++++.++.+... .+..++|.++++.. +|+++|||
T Consensus 5 ~v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~~-~g~yyl~y 74 (288)
T cd08998 5 SIIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIYL-NGKYYLYY 74 (288)
T ss_pred eEEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEEE-CCEEEEEE
Confidence 4678999999999864 5999999999999999988865432 34578999999874 99999999
Q ss_pred eeecCC-CcceEEEEEecCC-CCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 008189 135 TGVDHK-ERQVQNYAVPANP-SDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLY 212 (574)
Q Consensus 135 Tg~~~~-~~~~q~lA~s~D~-~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly 212 (574)
++.... ....+++|+|++. . ..|++. +||+....+......+||.++.. ++|++||++++... | +.+.
T Consensus 75 s~~~~~~~~~~i~va~s~~~~~----gpw~~~--~~v~~~~~~~~~~~~iDp~vf~d-~dG~~Yl~~~~~~~--~-i~~~ 144 (288)
T cd08998 75 SVSTFGSNRSAIGLATSDTLPD----GPWTDH--GIVIESGPGRDDPNAIDPNVFYD-EDGKLWLSFGSFWG--G-IFLV 144 (288)
T ss_pred EEEeCCCCceEEEEEEeCCCCC----CCCEEc--ceeeecCCCCCCcccccCCEEEc-CCCCEEEEeeeccC--C-EEEE
Confidence 987543 3456788999875 2 479874 58886443222346789996544 68999999986431 2 3333
Q ss_pred E-eCC---CCCCEEcccccccCC-CCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 213 R-SRD---FMKWTKAKHPIHSLA-NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 213 ~-S~D---l~~W~~~~~~l~~~~-~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
+ +.| ...|......+.... .....|-|.+|+-+ | +++|++|..
T Consensus 145 ~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~ 192 (288)
T cd08998 145 ELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYG 192 (288)
T ss_pred EeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcc
Confidence 3 222 123321111121111 23468999999987 5 899988864
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-12 Score=134.64 Aligned_cols=165 Identities=18% Similarity=0.217 Sum_probs=115.5
Q ss_pred eeEEE--CCEEEEEEee-CCCC----CCCC-ccEEEEeecCC-cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEE
Q 008189 62 GPMYY--KGIYHLFYQY-NPKG----AVWG-NIVWAHSVSKD-LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPII 132 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~-~P~~----~~~g-~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l 132 (574)
.+++. +|+|||||-. .... ..|. ...+++|+|+| |+||++++.++.++..+....+|.+.++.. +|+++|
T Consensus 15 ~i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~~-~G~y~m 93 (294)
T cd08984 15 TIIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVWH-GGVYHM 93 (294)
T ss_pred EEEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEEE-CCEEEE
Confidence 56776 7899999942 1111 1232 35799999999 999999987766644555677999999874 899999
Q ss_pred EEeeecC-----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee
Q 008189 133 LYTGVDH-----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRG 207 (574)
Q Consensus 133 ~YTg~~~-----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G 207 (574)
||++... ......++|+|+|. .+|++. .++... .....||.|+ ...+|+|+|++..... ..
T Consensus 94 yys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~--~~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~~~-~~ 159 (294)
T cd08984 94 YVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFV--GRVDLD-----SDRVIDACVF-KLPDGRWRMWYKDERR-GS 159 (294)
T ss_pred EEEecCCCCcccCCCcEEEEEECCCc-----CcceEC--CccccC-----CCCcEEeEEE-EeCCCEEEEEEECCCC-Ce
Confidence 9997632 12346778998874 789875 344211 1345799965 4357999999965322 23
Q ss_pred EEEEEEeCCCCCCEEcccccccCCCCCccccceeEEec
Q 008189 208 MAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 208 ~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.+.+..|+|+.+|+..+. ... ....|.|.+|+.+
T Consensus 160 ~~~~a~s~D~~~w~~~~~-~i~---~~~~EgP~v~k~~ 193 (294)
T cd08984 160 TTYAADSEDLYHWTVEGP-VLG---DRPHEGPNVFRWK 193 (294)
T ss_pred EEEEEECCCCCEEEeCCc-ccc---CCCCCCCCeeEEC
Confidence 467889999999997653 322 2235999999986
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.47 E-value=6e-13 Score=138.31 Aligned_cols=166 Identities=21% Similarity=0.319 Sum_probs=116.3
Q ss_pred CCCcee-eeEEECCE--EEEEEeeCCCCCCCCccEEEEeecCCcCCceecc-cccCCCCCccCCCeEeeeEEEcCCCeeE
Q 008189 56 PKHWIN-GPMYYKGI--YHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALE-PALYPSKPFDINGCWSGSATVLPGNKPI 131 (574)
Q Consensus 56 ~~gw~N-g~~~~~G~--yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~-~al~P~~~~D~~gv~SGsav~~~dg~~~ 131 (574)
+..-+| |++.++|. |||+|...-.. .+..+.|+|.|+|++||+..+ +.|.|+..++..||..++++.. +|+++
T Consensus 29 ~~~vfNpgai~~~~~~R~~l~yr~~~~~--~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yy 105 (312)
T PF04041_consen 29 PNAVFNPGAIVFDGGLRVYLLYRAYGSD--IGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYY 105 (312)
T ss_dssp SSEEEEEEEEEETTE--EEEEEEEEESS--SSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEE
T ss_pred cceEEcCcEEEECCeeEEEEEEEeECCC--CceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEE
Confidence 345678 88878776 89999865322 233489999999999999874 6899999999999999999985 89999
Q ss_pred EEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCC---CCCCcCccCCeeEEecCCCeEEEEEeeecCCeeE
Q 008189 132 ILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGP---DVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGM 208 (574)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~---~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~ 208 (574)
|+||+.+. ....+++|+|+|. .+|+|+. +++.... ......-+|-..|-...+|+|+|+.+ .+.
T Consensus 106 mtYta~~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~ 172 (312)
T PF04041_consen 106 MTYTAYSG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPS 172 (312)
T ss_dssp EEEEEEES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSS
T ss_pred EEEEEecC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCC
Confidence 99999975 3467899999985 8999973 3322111 00011225544322225899999998 346
Q ss_pred EEEEEeCCCCCCEEcccccccCCCCCcccc
Q 008189 209 AYLYRSRDFMKWTKAKHPIHSLANTGMWEC 238 (574)
Q Consensus 209 i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEc 238 (574)
|.+.+|+||++|+....++... ..+.||+
T Consensus 173 i~la~S~Dl~~W~~~~~~~~~~-~~~~~d~ 201 (312)
T PF04041_consen 173 IWLAYSPDLIHWGNHREPLLSP-RPGWWDS 201 (312)
T ss_dssp BEEEEESSSSSEEEEBETSB---STTSSCS
T ss_pred EEEEecCCcccccccccccccC-CCCcChh
Confidence 8999999999998765544432 3456777
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.5e-12 Score=127.94 Aligned_cols=187 Identities=18% Similarity=0.118 Sum_probs=129.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC----CccCCCeEeeeEEEcC-CCeeEEEEee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK----PFDINGCWSGSATVLP-GNKPIILYTG 136 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~----~~D~~gv~SGsav~~~-dg~~~l~YTg 136 (574)
++++++|+|++|--....+.. ....|-..+|+||+||+.++.+|.+.. .+...++|.++++..+ +|+++|+|++
T Consensus 7 ~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~~~~ 85 (265)
T cd08985 7 GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMWMHI 85 (265)
T ss_pred ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEEEEe
Confidence 578899999999877643211 134588999999999999999998764 3445679999998743 5899999998
Q ss_pred ecCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE-e
Q 008189 137 VDHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR-S 214 (574)
Q Consensus 137 ~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~-S 214 (574)
.+.. ....+++|+|++.. -.|+... .+. +.+ ...|||.|+++ ++|++||++++..+ ..+.+++ +
T Consensus 86 ~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf~D-dDG~~Yl~~~~~~~--~~i~i~~L~ 151 (265)
T cd08985 86 DSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLFVD-DDGTAYLLYSDRDN--SDLYIYRLT 151 (265)
T ss_pred CCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceEEc-CCCCEEEEEecCCC--CceEEEEeC
Confidence 6532 34578899997764 3466431 221 112 45799996554 78999999987532 2355555 4
Q ss_pred CCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC---CceeEEEEEE
Q 008189 215 RDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL---TRYDYYTIGT 281 (574)
Q Consensus 215 ~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~---~~~~~Y~vG~ 281 (574)
+|+..+.. .+.. .......|||.+|+.+ | +|+|++|... .....|++.+
T Consensus 152 ~d~~~~~~--~~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 152 DDYLSVTG--EVTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred CCcccccc--eEEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 67777743 2211 1234578999999997 5 8999998642 2346777775
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.2e-11 Score=122.10 Aligned_cols=172 Identities=21% Similarity=0.225 Sum_probs=114.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC--c----cCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP--F----DINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~--~----D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+|+||...... ...+..++|+||+||++++.+|.+... + ...++|.+.++.. +|+++|||+
T Consensus 12 ~i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~yy~yy~ 85 (288)
T cd09000 12 SICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRYH-DGTFYLITT 85 (288)
T ss_pred CEEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEEE-CCEEEEEEE
Confidence 578899999998532211 235889999999999999988854321 1 3457999999874 999999999
Q ss_pred eecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-----CeeEEE
Q 008189 136 GVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-----HRGMAY 210 (574)
Q Consensus 136 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~-----~~G~i~ 210 (574)
+........+++|+|++.. -.|+. |++.. ....||.|++. ++|++||+++.... ..+.|.
T Consensus 86 ~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~d-~dG~~Y~~~~~~~~~~~~~~~~~i~ 150 (288)
T cd09000 86 NVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFFD-DDGKVYLVGNGWDERRGYNGHGGIW 150 (288)
T ss_pred ecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeEc-CCCCEEEEecccCCccccCCCCcEE
Confidence 8753333467788887763 34652 33321 15689996554 68999999886432 123455
Q ss_pred EEEeCCCCCCEEcccc--cccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 211 LYRSRDFMKWTKAKHP--IHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 211 ly~S~Dl~~W~~~~~~--l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 151 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 151 LQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred EEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 5554 23345444432 2222233578999999986 5 899998864
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.3e-11 Score=124.02 Aligned_cols=180 Identities=14% Similarity=0.255 Sum_probs=120.8
Q ss_pred eeEEECCEEEEEEeeCCCCC---------CCCccEEEEeecCCcCCceecccccCCC--CCccCCCeEeeeEEEcCC---
Q 008189 62 GPMYYKGIYHLFYQYNPKGA---------VWGNIVWAHSVSKDLINWEALEPALYPS--KPFDINGCWSGSATVLPG--- 127 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~---------~~g~~~Wgha~S~Dlv~W~~~~~al~P~--~~~D~~gv~SGsav~~~d--- 127 (574)
.++.++|+|+||........ .+....+-..+|+||++|+.++.++.|. ..|. .++|.+.++.. +
T Consensus 13 ~~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~~~-~~~~ 90 (311)
T cd09003 13 TAVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIAVK-KING 90 (311)
T ss_pred CeEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceEEe-ccCC
Confidence 46788999999987653321 1223468889999999999999988742 3443 47899999874 6
Q ss_pred -CeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecC-CCCCCcC-ccCCeeEEecCCCeEEEEEeeecC
Q 008189 128 -NKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG-PDVNASA-FRDPTTAWWSNDGHWRMLVGSRRK 204 (574)
Q Consensus 128 -g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~-~~~~~~~-fRDP~Vvw~~~~g~~~M~~g~~~~ 204 (574)
|++||||+.. ...+++|+|++.. -.|+...+.|++... ++..... -.||.++++ ++|++||++++...
T Consensus 91 ~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~D-dDG~~Yl~~g~~~~ 161 (311)
T cd09003 91 KGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVD-DDGQGYLYFGGGVP 161 (311)
T ss_pred CCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEEC-CCCCEEEEECCccC
Confidence 9999999863 2357899988764 468875456777432 2221122 369996554 78999999985321
Q ss_pred -----CeeEEEEEE-eCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 205 -----HRGMAYLYR-SRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 205 -----~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
..+.+.+.+ ++|+..- .+++..- .....+|.|.+++.+ | +++|++|..
T Consensus 162 ~~~~~~~~~i~i~~l~~D~~~~--~g~~~~i-~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 162 GGRWANPNTARVIKLGDDMISV--DGSAVTI-DAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred CCccccCCCEEEEEeCCCceec--cCCceEc-cCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 123455665 4566443 2322111 123578999999987 6 899998864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1e-11 Score=104.42 Aligned_cols=75 Identities=31% Similarity=0.392 Sum_probs=55.5
Q ss_pred cceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccceE-EEEecC--CCeEEEEEEEeCCeE
Q 008189 443 GPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGF-VNVDLS--DKKLSLRSLIDHSVV 519 (574)
Q Consensus 443 ~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~-~~~~~~--~~~~~LrIfvD~S~v 519 (574)
..+||.|+++++.+++|.|.||... +. +++||++|+.. ...+.++.. ...... ++.++||||||+|+|
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~~---~~---l~vDR~~s~~~---~~~~~~~~~~~~~~~~~~~~~l~L~i~vD~Ssv 79 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPAN---GT---LTVDRTNSGIN---DFSEEFGTFVRSAPLDLGDKILKLRIFVDRSSV 79 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETTT---TE---EEEEETTSSTT---SCCCEEEEEEEEEETTTTESEEEEEEEEETTEE
T ss_pred CCeEEEEEECCCccEEEEEEEECCC---CE---EEEeCCCCccc---ccccccCcceEEeeccCCCCcEEEEEEEeCCEE
Confidence 4799999999999999999998643 32 67899998733 233444442 222222 366899999999999
Q ss_pred EEEcCCC
Q 008189 520 ESFGAGG 526 (574)
Q Consensus 520 EvFvNdG 526 (574)
|||+|||
T Consensus 80 EiFvNdG 86 (86)
T PF08244_consen 80 EIFVNDG 86 (86)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 9999987
|
It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B .... |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-10 Score=118.09 Aligned_cols=177 Identities=23% Similarity=0.316 Sum_probs=122.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCcc--CCCe-EeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFD--INGC-WSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D--~~gv-~SGsav~~~dg~~~l~YTg~~ 138 (574)
.+++++|.|+||+...+.. ..+..++|+||+||+..+.++.+....+ ..+. |.+.++. .+|+++|||+...
T Consensus 14 ~i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yy~y~~~~~ 87 (286)
T PF04616_consen 14 SIVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKYYMYYSDSG 87 (286)
T ss_dssp EEEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEEEEEEEEES
T ss_pred EEEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeEEEEEEccC
Confidence 5778899999999876543 3588999999999999998876664333 2233 9999986 5999999999333
Q ss_pred CCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC--eeEEEEEE-eC
Q 008189 139 HKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH--RGMAYLYR-SR 215 (574)
Q Consensus 139 ~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~--~G~i~ly~-S~ 215 (574)
......+++|+|++.. ..|+.. ..+... .....||.|+.. ++|++||+++..... .+.|.+.+ ++
T Consensus 88 ~~~~~~~~va~a~~~~----Gp~~~~--~~~~~~-----~~~~iD~~vf~d-~dG~~Yl~~~~~~~~~~~~~i~~~~l~~ 155 (286)
T PF04616_consen 88 GDAGSGIGVATADSPD----GPWTDP--GKIPIP-----GGNSIDPSVFVD-DDGKYYLYYGSWDNGDPGGGIYIAELDP 155 (286)
T ss_dssp TSTTEEEEEEEESSTT----S-EEEE--EEEEEE-----SSSSSSEEEEEE-TTSEEEEEEEESTTTSSEEEEEEEEEET
T ss_pred CCCCcceeEEEeCCcc----cccccc--cceeec-----cccccCceEEEe-cCCCcEEeCcccCCCccceeEEeecccC
Confidence 2345568899998763 478764 222211 245689996554 679999999986532 34566666 56
Q ss_pred CCCCCEEcc-cccccC---CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 216 DFMKWTKAK-HPIHSL---ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 216 Dl~~W~~~~-~~l~~~---~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 156 DGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp TTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred ccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 666665433 122222 235689999999987 5 8999999643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.9e-10 Score=113.77 Aligned_cols=175 Identities=13% Similarity=0.073 Sum_probs=117.2
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCC-CccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcC-CCeeEEEEeee
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVW-GNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLP-GNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~-g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~-dg~~~l~YTg~ 137 (574)
.+++. +|+||||+-..-....+ +...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|+++|+|++.
T Consensus 22 ~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y~~~~s~~ 99 (276)
T cd08983 22 FILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQYVVYWSSR 99 (276)
T ss_pred eEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeEEEEEecc
Confidence 56666 89999999865322111 346799999999999999887642211 23578999998754 68999999987
Q ss_pred cCC---CcceEEE--EEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 008189 138 DHK---ERQVQNY--AVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLY 212 (574)
Q Consensus 138 ~~~---~~~~q~l--A~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly 212 (574)
... ....+++ +.+.| +.+|+. ..|++.+ + ....|+.++ + .+|+|||++....+ ..|.+.
T Consensus 100 ~~~~~~~~~~~~i~~~tt~D-----f~tft~--p~~~~~~--~---~~~ID~~v~-~-~~g~~Yl~~k~~~~--~~i~~~ 163 (276)
T cd08983 100 LYDNTGGFYNYRLYATTTSD-----FVTFTE--PKVWIDL--G---ANVIDTTVV-K-VGGTYYRFYKNEGS--KDIELA 163 (276)
T ss_pred cCCCCCCCccEEEEEEecCc-----ccccCC--CeEeecC--C---CCeEeeEEE-E-eCCEEEEEEecCCC--CcEEEE
Confidence 542 1222333 33334 378986 2566652 2 456899964 4 35999999876432 458888
Q ss_pred EeCCCC-CCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 213 RSRDFM-KWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 213 ~S~Dl~-~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
+|++|. .|+...... .......|-|.+|+.+.. .+|+|+++.
T Consensus 164 ~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 164 RSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred EeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 999986 687654321 122347899999999732 288888764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-09 Score=112.21 Aligned_cols=176 Identities=19% Similarity=0.179 Sum_probs=113.8
Q ss_pred eEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCc-------cCCCeEeeeEEEcCCCeeEEEEe
Q 008189 63 PMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPF-------DINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~-------D~~gv~SGsav~~~dg~~~l~YT 135 (574)
++.++|+|+||.-.. .+..++|+||+||+.++.+|.+...+ ...++|.+.++. .+|+++|||+
T Consensus 5 vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yylyys 74 (279)
T cd08988 5 IIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKFYLYYS 74 (279)
T ss_pred EEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEEEEEEE
Confidence 577899999997531 37789999999999999888644332 235799999987 4899999999
Q ss_pred eecCC-CcceEEEEEecCCCCccc-ceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE
Q 008189 136 GVDHK-ERQVQNYAVPANPSDPYL-RKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR 213 (574)
Q Consensus 136 g~~~~-~~~~q~lA~s~D~~d~~l-~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~ 213 (574)
+.... ....+++|+|++..++.- ..|++ ..|++..... ......||.++++ ++|++||++++.. .| |.+.+
T Consensus 75 ~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~--~g-i~~~e 147 (279)
T cd08988 75 VSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIFD-QHGQPWLSFGSFW--GG-IKLFE 147 (279)
T ss_pred eccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEEc-CCCCEEEEecccC--CC-EEEEE
Confidence 86432 345678999987654311 12443 2566653221 1134579996555 7899999998642 12 44444
Q ss_pred -eCCCCCCEEcccc--cccC-CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 214 -SRDFMKWTKAKHP--IHSL-ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 214 -S~Dl~~W~~~~~~--l~~~-~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
++|+..-...+.. +... ......|-|.+++-+ | +++|++|..
T Consensus 148 L~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 148 LDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred ECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 4554432111111 2111 123467999999986 5 888988864
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.1e-10 Score=113.63 Aligned_cols=131 Identities=20% Similarity=0.267 Sum_probs=94.0
Q ss_pred eeEEEC-CEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC-------CCCCccCCCeEeeeEEEcCC-CeeEE
Q 008189 62 GPMYYK-GIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY-------PSKPFDINGCWSGSATVLPG-NKPII 132 (574)
Q Consensus 62 g~~~~~-G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~-------P~~~~D~~gv~SGsav~~~d-g~~~l 132 (574)
.+++.+ |+|||||...... ......+++|+|+|+++|+..+..+. +...++...+.++.++.+++ |+++|
T Consensus 70 ~v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m 148 (276)
T cd08979 70 SVVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRM 148 (276)
T ss_pred eEEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEE
Confidence 556677 9999999976532 23457899999999999999876542 22334446788999887643 89999
Q ss_pred EEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 133 LYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
+|++........+.+|.|.|. ++|++....+.. ..+.....+++|.++ + .+|+|+|++.+.
T Consensus 149 ~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~--~~~~~~~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 149 YYGARDADERGAIGLATSPDL-----IHWTPVPPPPGP--RTGYDDGQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred EEEeEccCCCcEEEEEECCCC-----CcceECCCCCCC--CCcccCCcCccceEE-E-ECCEEEEEEEec
Confidence 999876444567889999885 899986432212 122234678999964 4 479999999876
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.1e-09 Score=112.55 Aligned_cols=166 Identities=19% Similarity=0.247 Sum_probs=112.6
Q ss_pred eeEEECCEEEEEEeeCCCCC-CCCccEEEEeecCCcC-Cceecc-cccCCC------------------CCccCCCeEee
Q 008189 62 GPMYYKGIYHLFYQYNPKGA-VWGNIVWAHSVSKDLI-NWEALE-PALYPS------------------KPFDINGCWSG 120 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~-~~g~~~Wgha~S~Dlv-~W~~~~-~al~P~------------------~~~D~~gv~SG 120 (574)
.+++++|+|||||+..-... .-...+.|+|+|++.. .|+++. +.|.|. +.||..++..+
T Consensus 116 ~Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~v~~P 195 (349)
T cd08992 116 EVLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHKVHDP 195 (349)
T ss_pred EEEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCceECC
Confidence 67789999999999542111 1123467888887765 698764 456564 23677788888
Q ss_pred eEEEcCCCeeEEEEeeecC-------CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC
Q 008189 121 SATVLPGNKPIILYTGVDH-------KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG 193 (574)
Q Consensus 121 sav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g 193 (574)
+++. .+|+++|||+|+.. ...+.+++|+|++.. -.|+|.+.+||+... + ..+ ||+ ..+
T Consensus 196 ~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~~------~--~~~-~~~-~~~ 260 (349)
T cd08992 196 CLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNSG------H--ETC-VWQ-YKG 260 (349)
T ss_pred EEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCCC------C--ceE-EEe-cCC
Confidence 8776 59999999999752 134678999998875 468998889998521 1 236 688 456
Q ss_pred eE-EEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEec
Q 008189 194 HW-RMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 194 ~~-~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.+ .|+..-+ ...|. +..|+|+++|+-...+-..+...+...|||-+.-+
T Consensus 261 ~~~~~~~~d~-~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 261 GIAAMLTTDG-PEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred ceEEEEeccC-CCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 66 5554432 22344 78899999999765433233445667788776654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.8e-09 Score=108.34 Aligned_cols=129 Identities=20% Similarity=0.201 Sum_probs=88.3
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC-CccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK-PFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.++++ +|+||||.-............+.+.+|+||+||+.++.++.+.. .+...++|.+.++. .+|+++|||+...
T Consensus 10 ~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~yyly~s~~~ 88 (291)
T cd08981 10 FILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGRYYMFATFHN 88 (291)
T ss_pred EEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCEEEEEEEecc
Confidence 46677 99999998765322111123589999999999999998886543 34456799999876 5999999998764
Q ss_pred CC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 008189 139 HK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGS 201 (574)
Q Consensus 139 ~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~ 201 (574)
.. ....+++|+|++.. -.|+.....|+... + ....||.++ .+.+|++||+++.
T Consensus 89 ~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~--~---~~~iDp~~f-~DdDG~~Yl~~~~ 142 (291)
T cd08981 89 PGGERRGTAILVSDSPE----GPFVPHSDGPVTPE--D---WMCLDGTLY-VDEDGKPWMVFCH 142 (291)
T ss_pred CCCceeeEEEEECCCCC----CCCEeCCCCccCCC--C---CceEcCceE-EcCCCCEEEEEEe
Confidence 32 22346788887754 35766433344321 1 235799854 5478999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-08 Score=103.94 Aligned_cols=168 Identities=18% Similarity=0.188 Sum_probs=109.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCc------cCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPF------DINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~------D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+|+||+..... ...+...+|+||+||+..+.++...... ...++|.+.++. .+|+++|+|+
T Consensus 12 ~ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yy~yy~ 85 (269)
T cd08989 12 SIIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YDGKFWLIYT 85 (269)
T ss_pred cEEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-ECCEEEEEEe
Confidence 578899999999854221 1236778999999999998877543211 235799999877 5999999999
Q ss_pred eecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE-e
Q 008189 136 GVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR-S 214 (574)
Q Consensus 136 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~-S 214 (574)
+........+++|++++..+ .|+. |+... ....||.++.+ ++|+.||+.+.. +.|.+.+ +
T Consensus 86 ~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f~D-~dG~~Yl~~~~~----~~i~l~~l~ 146 (269)
T cd08989 86 AVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLFHD-DDGKKYLINMGW----SGIRLQEYS 146 (269)
T ss_pred ccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceEEc-CCCCEEEEecCC----CcEEEEEEC
Confidence 86433345678899877542 4653 44321 23479996544 799999998753 2244444 3
Q ss_pred CCCCCCEEcccc----cccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 215 RDFMKWTKAKHP----IHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 215 ~Dl~~W~~~~~~----l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.|+..= .+.+ +.........|-|.+++.+ | +++|++|...
T Consensus 147 ~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 147 PAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred hhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 332211 1111 1111223468999999976 5 8999998644
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.7e-09 Score=107.79 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=75.6
Q ss_pred eeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEec--CCCCCCcCccCCeeEEecCCCeEEE
Q 008189 120 GSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP--GPDVNASAFRDPTTAWWSNDGHWRM 197 (574)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~--~~~~~~~~fRDP~Vvw~~~~g~~~M 197 (574)
+.++. .+|+++|||++........+++|+|+|+ ++|++.+ +|+|.+ ...++...++||.|+ + .+|+|+|
T Consensus 3 P~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 45665 5999999999876555678999999995 8999974 565533 334556788999965 4 4889999
Q ss_pred EEeeec--CCeeEEEEEEeCCCCCCEEccc
Q 008189 198 LVGSRR--KHRGMAYLYRSRDFMKWTKAKH 225 (574)
Q Consensus 198 ~~g~~~--~~~G~i~ly~S~Dl~~W~~~~~ 225 (574)
++++.. ....+|.+++|+|+.+|++.+.
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~ 103 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGT 103 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEecc
Confidence 998865 3455799999999999999864
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-08 Score=104.48 Aligned_cols=164 Identities=16% Similarity=0.123 Sum_probs=108.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC-----------ccCCCeEeeeEEEcCCCee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP-----------FDINGCWSGSATVLPGNKP 130 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-----------~D~~gv~SGsav~~~dg~~ 130 (574)
.+++++|+|+||.-..-. ...+...+|+||+||+.++.++.+... .-..++|.+.++.. +|++
T Consensus 15 ~v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~gky 88 (269)
T cd09001 15 DVIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLRYH-NGTF 88 (269)
T ss_pred eEEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceEEE-CCEE
Confidence 578889999999854211 123678899999999999877643211 11257999999874 9999
Q ss_pred EEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEE
Q 008189 131 IILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAY 210 (574)
Q Consensus 131 ~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ 210 (574)
+|+|+... ..+.+|++++.. -.|+.. +++ ....||.++++ .+|+.||+++.. .+.
T Consensus 89 y~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~D-~dG~~Yl~~~~~-----~i~ 143 (269)
T cd09001 89 YVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLFD-DDGTAYLVYGGG-----TIR 143 (269)
T ss_pred EEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEEc-CCCCEEEEeCCC-----cEE
Confidence 99999852 356788887653 346542 222 13579996554 789999998753 244
Q ss_pred EEE-eCCCCCCEEcccccccCC--CCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 211 LYR-SRDFMKWTKAKHPIHSLA--NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 211 ly~-S~Dl~~W~~~~~~l~~~~--~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
+.+ +.|+....-....+.... .....|-|.+++-+ | +++|++|...
T Consensus 144 ~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~~ 192 (269)
T cd09001 144 LVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAWG 192 (269)
T ss_pred EEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecCC
Confidence 454 667666521111122221 13578999999875 5 8999998753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.1e-08 Score=100.99 Aligned_cols=154 Identities=19% Similarity=0.255 Sum_probs=113.9
Q ss_pred cee-eeEEECCEEEEEEeeCC--CCCCCCccEEEEeecCCcCC-ceec-ccccCC-CCCccCCCeEeeeEEEcCCCeeEE
Q 008189 59 WIN-GPMYYKGIYHLFYQYNP--KGAVWGNIVWAHSVSKDLIN-WEAL-EPALYP-SKPFDINGCWSGSATVLPGNKPII 132 (574)
Q Consensus 59 w~N-g~~~~~G~yHlfyq~~P--~~~~~g~~~Wgha~S~Dlv~-W~~~-~~al~P-~~~~D~~gv~SGsav~~~dg~~~l 132 (574)
-.| ++++.++++||+|+--- +...-...|.+.|.|+|+++ |+-. .+.+.| ..++|.-||..+.++.. +++++|
T Consensus 31 vFNpav~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~~y~m 109 (314)
T COG2152 31 VFNPAVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GGRYYM 109 (314)
T ss_pred EecceeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CCEEEE
Confidence 557 89999999999999711 01111457899999999999 9866 467888 55677789999999885 899999
Q ss_pred EEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC---CeeEE
Q 008189 133 LYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK---HRGMA 209 (574)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~---~~G~i 209 (574)
.|||.+ +..+..++|+++|. .+|+|. ++++.+ ++||-..+=...+|+|+|+---... ..+-|
T Consensus 110 tYTa~s-~~g~~~~la~t~~f-----~n~~ri--g~i~~p-------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~ni 174 (314)
T COG2152 110 TYTAYS-DKGPRLALAVTKDF-----LNWERI--GAIFPP-------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNI 174 (314)
T ss_pred EEEecC-CCCcccchhhhhhh-----hhhhhc--ccccCC-------CCCCceEeeEEecCcEEEEEeecccccCccCce
Confidence 999986 45678889999885 789995 345432 3466553222257899998654332 24579
Q ss_pred EEEEeCCCCCCEEcccccc
Q 008189 210 YLYRSRDFMKWTKAKHPIH 228 (574)
Q Consensus 210 ~ly~S~Dl~~W~~~~~~l~ 228 (574)
.+..|+||.+|.....++.
T Consensus 175 wia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 175 WIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred EEEEcCCccCCCccceeec
Confidence 9999999999987654443
|
|
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.2e-08 Score=100.79 Aligned_cols=163 Identities=15% Similarity=0.156 Sum_probs=104.6
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKE 141 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~ 141 (574)
.+++.+|+|+|+..... ....+...+|+||+||+.++.++.+. ..++|.+.++. .+|+++|||+......
T Consensus 19 ~i~~~~~~yY~~~t~~~-----~~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys~~~~~~ 88 (280)
T cd09002 19 SILRDGEDYYMTHSSFK-----YTPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFPAIPEGG 88 (280)
T ss_pred EEEEECCEEEEEEcchh-----cCCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEEeecCCC
Confidence 57788999999764211 11247788999999999998877543 35799999876 6999999999876444
Q ss_pred cceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCE
Q 008189 142 RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWT 221 (574)
Q Consensus 142 ~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~ 221 (574)
...+++|++.+.. -.|++ |+.... ...-||.|+++ .+|++||+++... .+.| +.|+..-
T Consensus 89 ~~~~~va~ad~p~----Gpw~~----~~~~~~-----~~~IDp~vf~D-ddG~~Yl~~~~~~----~~~l--~~d~~~~- 147 (280)
T cd09002 89 NWTNMVIWADSPE----GPWSK----PIDLKI-----GGCIDPGHVVD-EDGNRYLFLSGGD----RVRL--TADGLST- 147 (280)
T ss_pred CceEEEEEECCCC----CCCcC----CEecCC-----CCccCCceEEc-CCCCEEEEECCee----EEEE--CccccEe-
Confidence 5567889887653 34654 331111 12369996655 7899999986431 1111 2332211
Q ss_pred Eccc--ccccC--------CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 222 KAKH--PIHSL--------ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 222 ~~~~--~l~~~--------~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.+. .+..+ ..+...|-|.+++.+ | +++|++|...
T Consensus 148 -~g~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~YYl~yS~g~ 191 (280)
T cd09002 148 -DGKLEHVYDGWRYPEDWVVEGFALEGPKLKKRN--G-------------YYYLTTAVGG 191 (280)
T ss_pred -cCcCEEEecCcccccccccCCcccccceEEEEC--C-------------EEEEEEccCC
Confidence 111 11111 012347999999886 5 8999998643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.91 E-value=6e-08 Score=99.87 Aligned_cols=185 Identities=16% Similarity=0.102 Sum_probs=116.1
Q ss_pred eEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceeccccc--CCCC-CccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 63 PMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAL--YPSK-PFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al--~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
++.++++|+||+--.. .....++|+||+||+.....+ .+.. .+...++|.+.++. .+|+++|||+....
T Consensus 5 v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyys~~~~ 76 (288)
T cd08980 5 VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYFAAGDG 76 (288)
T ss_pred EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEEEccCC
Confidence 5677889999986431 358899999999999875332 2322 13346899999976 58999999998753
Q ss_pred --CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC---CeeEEEEEEe
Q 008189 140 --KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK---HRGMAYLYRS 214 (574)
Q Consensus 140 --~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~---~~G~i~ly~S 214 (574)
...+.+++|.+++..++ +..|+.. .+++.... ..--||.++ .+ +|++||+++.... ....|.+.+.
T Consensus 77 ~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~~----~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i~~~~l 147 (288)
T cd08980 77 GGNANHRMYVLENAGADPP-TGPWTFK--GRLADPTD----RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNLYIAKM 147 (288)
T ss_pred CCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCCC----CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccEEEEEC
Confidence 23456678887652112 3578863 34442111 233699964 43 5999999875431 1234666665
Q ss_pred CCCCCCEEcccc--cccCCC------CCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEEE
Q 008189 215 RDFMKWTKAKHP--IHSLAN------TGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281 (574)
Q Consensus 215 ~Dl~~W~~~~~~--l~~~~~------~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 281 (574)
.+...+. +.+ +..+.. ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 148 ~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 148 SNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred CCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 5543442 322 222211 1357999999997 5 89999997544345666654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.90 E-value=9.2e-08 Score=101.45 Aligned_cols=219 Identities=17% Similarity=0.186 Sum_probs=127.7
Q ss_pred ccccCCCccccchhhhccCcccccceeecCCCcee--eeEE--------ECCEEEEEEeeCCCC----CCCCccEEEEee
Q 008189 27 ASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN--GPMY--------YKGIYHLFYQYNPKG----AVWGNIVWAHSV 92 (574)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~RP~~H~~p~~gw~N--g~~~--------~~G~yHlfyq~~P~~----~~~g~~~Wgha~ 92 (574)
+..-++|+=.|.++-..+ +-...+.=|+. .++. ++|.--+|-+-.|.. ..|+..|+++.-
T Consensus 29 ~~~~p~~~~~tipnI~~~------~~~~~~dldVWDsWPLqd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY 102 (428)
T PF02435_consen 29 SYQVPYFNASTIPNIPAA------FPVMADDLDVWDSWPLQDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFY 102 (428)
T ss_dssp TTB--SBGGGG----GCG------EEECTTE-EEEEEEEEE-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEE
T ss_pred cccccCCccccCCccCcc------ccccccceeeeccceeecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEE
Confidence 334444555555544332 22333455666 4443 588555566665543 357889999999
Q ss_pred cCCcC----CceecccccCCCCCc-cCCCeEeeeEEEcC-CCeeEEEEeeecC--CC--cceE-----EEEEecCCCCcc
Q 008189 93 SKDLI----NWEALEPALYPSKPF-DINGCWSGSATVLP-GNKPIILYTGVDH--KE--RQVQ-----NYAVPANPSDPY 157 (574)
Q Consensus 93 S~Dlv----~W~~~~~al~P~~~~-D~~gv~SGsav~~~-dg~~~l~YTg~~~--~~--~~~q-----~lA~s~D~~d~~ 157 (574)
|++.. +|+..+.++...... ....-|||||+... ||+..||||+... .. .|+. +++...+. +-.
T Consensus 103 ~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~ 181 (428)
T PF02435_consen 103 SKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVW 181 (428)
T ss_dssp EETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEE
T ss_pred ecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-cee
Confidence 99998 999999877655431 22446999999987 7999999999653 11 2222 12232331 223
Q ss_pred cceeeccCCCceEecCCC-CC------CcCccCCeeEEecCCCeEEEEEeeec---C-----------------------
Q 008189 158 LRKWIKPDNNPVVFPGPD-VN------ASAFRDPTTAWWSNDGHWRMLVGSRR---K----------------------- 204 (574)
Q Consensus 158 l~~w~k~~~~Pvi~~~~~-~~------~~~fRDP~Vvw~~~~g~~~M~~g~~~---~----------------------- 204 (574)
+..|+++ ..|+.++.. |. ...||||++|-...+|+-||++-+.. +
T Consensus 182 i~g~~~~--~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~ 259 (428)
T PF02435_consen 182 ITGFSNH--HELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENND 259 (428)
T ss_dssp EEEEEEE--EEEES--SSSB--HHHHHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSC
T ss_pred Eccccce--eEeeccchhhhhChhhcCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccccc
Confidence 4456554 355554322 11 26899999654436899898875432 1
Q ss_pred -------CeeEEEEEEeCC--CCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 205 -------HRGMAYLYRSRD--FMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 205 -------~~G~i~ly~S~D--l~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
..|+|.|.+..| +..|+...+++.+..-....|.|+++.++ | ||+|+.+.
T Consensus 260 ~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~de~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 260 NKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVNDELERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp CHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS-EEEEEEEEET--T-------------EEEEEEEE
T ss_pred cccccceecceeeeEEecCCCCCccEEeCcceecccccccccCCcEEEEC--C-------------EEEEEEEe
Confidence 156899998755 45799886444344445689999999998 6 99997654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.6e-08 Score=97.58 Aligned_cols=172 Identities=16% Similarity=0.071 Sum_probs=106.0
Q ss_pred eEEE-CCEEEEEEeeCCCCCC-----CCccEEEEeecCCcCCceecccccCCCCC------------ccCCCeEeeeEEE
Q 008189 63 PMYY-KGIYHLFYQYNPKGAV-----WGNIVWAHSVSKDLINWEALEPALYPSKP------------FDINGCWSGSATV 124 (574)
Q Consensus 63 ~~~~-~G~yHlfyq~~P~~~~-----~g~~~Wgha~S~Dlv~W~~~~~al~P~~~------------~D~~gv~SGsav~ 124 (574)
++.. +|+|+|+.-....+.. ......-.++|+||+||+.++.++..... +...++|.+.+..
T Consensus 7 v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~ 86 (269)
T cd08986 7 VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVWAPELHY 86 (269)
T ss_pred EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcCCceEEE
Confidence 4445 6799999875432210 01235778999999999999888754321 2346799999987
Q ss_pred cCCCeeEEEEeeecCC-CcceEEEEEecCCCCcccceeeccCCC-ceEecCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 125 LPGNKPIILYTGVDHK-ERQVQNYAVPANPSDPYLRKWIKPDNN-PVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 125 ~~dg~~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~-Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
.+|+++|+|+..... ....+++|++++.. -.|+..... |+ ..-.||.++ .+.+|++||+++..
T Consensus 87 -~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~f-~D~DG~~Yl~~~~~ 151 (269)
T cd08986 87 -IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSLF-EDDDGKVYLVWHNT 151 (269)
T ss_pred -ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCceE-EcCCCCEEEEeeCC
Confidence 489999999976432 23456677776653 346653221 11 234799954 55789999998753
Q ss_pred cCCeeEEEEEEeCCCCCCEEcccccccCC----CCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 203 RKHRGMAYLYRSRDFMKWTKAKHPIHSLA----NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 203 ~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~----~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
. + .--+.|+....-....+.... .....|-|.+++.+ | +++|++|..
T Consensus 152 ~-----i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 152 L-----I-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred c-----e-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 1 1 122556554321111111111 12357999999976 5 899999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.6e-07 Score=92.40 Aligned_cols=192 Identities=18% Similarity=0.329 Sum_probs=121.2
Q ss_pred eecCCCc-ee----eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC----CCCCccCCCeEeeeEE
Q 008189 53 FQPPKHW-IN----GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY----PSKPFDINGCWSGSAT 123 (574)
Q Consensus 53 ~~p~~gw-~N----g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~----P~~~~D~~gv~SGsav 123 (574)
+.|..|| +. -.++++|+||||--.... ..|+-+-+. |++|+.++.|+. +.. ...+.|.+.++
T Consensus 14 ~~pk~~~~~~lkDPtiv~~nGkYyvYgT~~~~------~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPqVf 84 (303)
T cd08987 14 ISPKSDWIVAIKDPTVVYYNGRYHVYATTADA------GNYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQVF 84 (303)
T ss_pred ccCCCCCeeeecCCeEEEECCEEEEEEccCCC------CCceeeeec-ccCHhHhccchhhcccCCC--CCcccccCEEe
Confidence 3466788 55 667789999999765421 234333333 999999987763 221 23468889887
Q ss_pred E-cCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 124 V-LPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 124 ~-~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
. ..++++||+|+.. ..++|+|.|..++ -.|.. ..|++...........-|++|+ . .++..||+.+..
T Consensus 85 yf~pk~kwYL~Yq~~------~~~yaTs~dp~~P--~~ws~--~qpl~~~~~~~~~~~~ID~~vI-~-Dd~~~YLff~~d 152 (303)
T cd08987 85 YFAPQNKWYLIYQWW------PAAYSTNSDISNP--NGWSA--PQPLFSGTPNGSPGGWIDFWVI-C-DDTNCYLFFSDD 152 (303)
T ss_pred eeccCCEEEEEEecC------ceEEEeCCCCCCC--CccCC--CcccccCcccCCCCCccceeEE-e-CCCCEEEEEecC
Confidence 2 2589999999952 2568999998877 46776 3688743211123456899974 3 588888887542
Q ss_pred cCCeeEEEEEEe-CCCCCCEEc-ccc--ccc-CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEE
Q 008189 203 RKHRGMAYLYRS-RDFMKWTKA-KHP--IHS-LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYY 277 (574)
Q Consensus 203 ~~~~G~i~ly~S-~Dl~~W~~~-~~~--l~~-~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y 277 (574)
.| .||+| ..+.+.... +.. +.. .......|-|+++++. | +.+++|++++.+..+..|
T Consensus 153 ---nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~~rY 214 (303)
T cd08987 153 ---NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDGGRY 214 (303)
T ss_pred ---CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCCCCe
Confidence 34 46775 222222110 111 111 1234689999999997 5 238999999876544568
Q ss_pred EEEEEeC
Q 008189 278 TIGTYNR 284 (574)
Q Consensus 278 ~vG~~d~ 284 (574)
+++ +..
T Consensus 215 frs-~Ts 220 (303)
T cd08987 215 FRS-WTA 220 (303)
T ss_pred EEE-EEc
Confidence 887 543
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.6e-07 Score=92.21 Aligned_cols=167 Identities=18% Similarity=0.218 Sum_probs=99.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKE 141 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~ 141 (574)
.+++++|+|+|+--.. + ++.+|+||++|+.++.++. ..++|.++++. .+|++|++|+..
T Consensus 7 ~i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~~---- 65 (295)
T cd08982 7 VVILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTASTY---- 65 (295)
T ss_pred eEEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeCC----
Confidence 3677899999886542 1 3678999999999987764 36799999987 588876655532
Q ss_pred cceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE--------
Q 008189 142 RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR-------- 213 (574)
Q Consensus 142 ~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~-------- 213 (574)
.+.+|+|.|..++ .|... .+. ......||.|+++ .+|++||++|.... .+ |.+.+
T Consensus 66 --~~~v~~s~~p~gp---~w~~~--~~~-------~~~~~IDp~vf~D-dDGk~Yl~~g~~~~-~~-i~~~eL~~d~~~~ 128 (295)
T cd08982 66 --NSRIYKTADPLSG---PWEEV--DKS-------FPPGLADPALFID-DDGRLYLYYGCSNN-YP-LRGVEVDPDTFRP 128 (295)
T ss_pred --CceEEEeCCCCCC---Ccccc--ccc-------cCCCccCCceEEC-CCCCEEEEEecCCC-CC-eEEEEECcccCCc
Confidence 2357888765321 25432 010 1134579996544 68999999875321 11 22222
Q ss_pred ----------eCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEEE
Q 008189 214 ----------SRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281 (574)
Q Consensus 214 ----------S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 281 (574)
+..-..|+..+.-..........|-|.+++-+ | +++|++|........|.+|-
T Consensus 129 ~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y~v~~ 191 (295)
T cd08982 129 IGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTYADGV 191 (295)
T ss_pred cCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcEeEEE
Confidence 22223455433211000123357889998865 5 89999987543334455543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.65 E-value=9e-07 Score=90.70 Aligned_cols=129 Identities=17% Similarity=0.177 Sum_probs=87.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecc--cccCCCCCccCCCeEeeeEEEcC-CCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALE--PALYPSKPFDINGCWSGSATVLP-GNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~--~al~P~~~~D~~gv~SGsav~~~-dg~~~l~YTg~~ 138 (574)
.+++.+|+|||||..+... .......++|+|+|+++|+..+ +.+.+...++...+-.+.++.++ +|+++|+|.+..
T Consensus 66 s~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~ 144 (280)
T cd08995 66 SVIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRL 144 (280)
T ss_pred EEEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEecc
Confidence 5667899999999876432 1234679999999999999875 33432223343445567777653 589999998754
Q ss_pred C----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 008189 139 H----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR 203 (574)
Q Consensus 139 ~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~ 203 (574)
. .....+.++.|+| |++|+.. ++++.+..+ ..+.-|.+ ++ .+|+|+|+++.+.
T Consensus 145 ~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~~~---~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 145 LDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPGLY---FMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred CCCCCCCCeEEEEEEeCC-----cCcceec--CceecCCCc---ceeecceE-EE-ECCEEEEEEEecc
Confidence 2 2234566777877 4899875 466543222 34678885 45 5899999998764
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.2e-06 Score=85.59 Aligned_cols=146 Identities=12% Similarity=0.053 Sum_probs=94.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-Cceecccc-cCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPA-LYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~a-l~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.+++++|+|||||..... .+....++|+|+|.. .|++.... +.+ ...+...+..++++++.||+++|+|.+.
T Consensus 68 ~i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl~~~~~-- 141 (274)
T cd08990 68 DVVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYLYWGGG-- 141 (274)
T ss_pred eEEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEEEECCc--
Confidence 678899999999997643 245679999999976 89987543 322 2222345667888887789999999864
Q ss_pred CCcceEEEE-EecCCCCcccceeeccCCCceEecC---CCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeC
Q 008189 140 KERQVQNYA-VPANPSDPYLRKWIKPDNNPVVFPG---PDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSR 215 (574)
Q Consensus 140 ~~~~~q~lA-~s~D~~d~~l~~w~k~~~~Pvi~~~---~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~ 215 (574)
+...++ .+.| +.+|+.. ..+|..+ .......+.-|.+ ++ .+|+|||++++.. ...+.+.+|+
T Consensus 142 ---~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~~~~a~s~ 207 (274)
T cd08990 142 ---LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEEIAYATSD 207 (274)
T ss_pred ---CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcEEEEEEcC
Confidence 233444 3334 3677642 2233211 1111223457885 45 5899999998753 3467778888
Q ss_pred CCC-CCEEccccc
Q 008189 216 DFM-KWTKAKHPI 227 (574)
Q Consensus 216 Dl~-~W~~~~~~l 227 (574)
++. -|+..+.++
T Consensus 208 ~p~GP~~~~g~~~ 220 (274)
T cd08990 208 SPLGPFTYRGVIL 220 (274)
T ss_pred CCCCCcccCcEEe
Confidence 875 577655443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.1e-07 Score=92.45 Aligned_cols=105 Identities=21% Similarity=0.295 Sum_probs=79.9
Q ss_pred eeEEECCEEEEEEeeCCCC----CCCCccEEEEeecCCc-CCceec-ccccCCCC-CccCCCeEeeeEEEcCCCeeEEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKG----AVWGNIVWAHSVSKDL-INWEAL-EPALYPSK-PFDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~----~~~g~~~Wgha~S~Dl-v~W~~~-~~al~P~~-~~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
.+++++|+|||||...... .......+|+|+|+|+ -+|+++ .++|.|.. .||..+++.++++...+|+++|+|
T Consensus 84 ~vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~~m~y 163 (291)
T cd08994 84 TIKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSYLLVY 163 (291)
T ss_pred eEEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCEEEEE
Confidence 6778899999999976531 1224568999999994 699984 56677754 367788999999875589999999
Q ss_pred eeecCC---CcceEEEEEecCCCCcccceeeccCCCceE
Q 008189 135 TGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNNPVV 170 (574)
Q Consensus 135 Tg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi 170 (574)
+|.... ..+.+++|+|+|.. .+|+|....||+
T Consensus 164 ~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 164 KGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred eccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 998642 35778999998863 479987656654
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.2e-06 Score=87.98 Aligned_cols=151 Identities=13% Similarity=0.142 Sum_probs=97.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-Cceeccccc-C-CCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPAL-Y-PSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al-~-P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.+++++|+|||||..+..+ .....+++|+|+|.. .|++.+..+ . +.. ..+...+++++++||++||+|.+..
T Consensus 66 ~v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~---~~~~~Dp~v~~d~dG~~Yl~~~~~~ 140 (287)
T cd08999 66 DVSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPEG---EGGAIDPSFFTDTDGKRYLVWKSDG 140 (287)
T ss_pred eEEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCCC---CCCccCCCeEECCCCCEEEEEeccC
Confidence 5678999999999876543 245679999999964 999875332 2 221 2446778888876899999997643
Q ss_pred CC--CcceEEEE-EecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec--CC--eeEEEE
Q 008189 139 HK--ERQVQNYA-VPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR--KH--RGMAYL 211 (574)
Q Consensus 139 ~~--~~~~q~lA-~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~--~~--~G~i~l 211 (574)
.. +.+.+.++ .+.|+ .+|... ...++.+........+.-|.+ ++ .+|+|||++++.. .. .=++.+
T Consensus 141 ~~~~~~~~i~~~~ls~d~-----~~~~~~-~~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y~i~~ 212 (287)
T cd08999 141 NSIGKPTPIYLQELSADG-----LTLTGE-PVRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTYAVGV 212 (287)
T ss_pred CCCCCCceEEEEEeCCCC-----ccccCC-cEeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCEEEEE
Confidence 21 11224444 44443 667542 123333322233345678985 45 5899999998753 11 225788
Q ss_pred EEeCCCC-CCEEccc
Q 008189 212 YRSRDFM-KWTKAKH 225 (574)
Q Consensus 212 y~S~Dl~-~W~~~~~ 225 (574)
++|+++. .|+....
T Consensus 213 ~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 213 ARSKSLLGPYVKAPG 227 (287)
T ss_pred EEeCCCcCCcCCCCC
Confidence 9999987 8887543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.49 E-value=1e-05 Score=83.42 Aligned_cols=154 Identities=14% Similarity=0.174 Sum_probs=93.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 140 (574)
.+++.+|+|||||...... ......++|+|+|.. .|+..+..+.+.. .....++++.+.||+++|+|+.....
T Consensus 59 ~v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~~~~~~~ 132 (294)
T cd08991 59 EVYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYYSRNNYG 132 (294)
T ss_pred EEEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEEEecCCC
Confidence 6788999999999876433 235678999999976 7887654433321 34567889887779999999875432
Q ss_pred C--cceEEEEEecCCCCcccceeeccCCC---ceEec-------C-C---CCCCcCccCCeeEEecCCCeEEEEEeeec-
Q 008189 141 E--RQVQNYAVPANPSDPYLRKWIKPDNN---PVVFP-------G-P---DVNASAFRDPTTAWWSNDGHWRMLVGSRR- 203 (574)
Q Consensus 141 ~--~~~q~lA~s~D~~d~~l~~w~k~~~~---Pvi~~-------~-~---~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~- 203 (574)
. ......+.+.|. .+|...... |+..+ + . ..+.....-|.++ + .+|+|||++.+..
T Consensus 133 ~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~-k-~~g~yyl~ys~~~~ 205 (294)
T cd08991 133 NRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVL-K-HNGRYYLTYSANHY 205 (294)
T ss_pred CcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEEE-E-ECCEEEEEEECCCC
Confidence 1 123344565553 455421111 11111 0 0 0111234568754 5 5899999987643
Q ss_pred C-CeeEEEEEEeCCC-CCCEEc-ccccc
Q 008189 204 K-HRGMAYLYRSRDF-MKWTKA-KHPIH 228 (574)
Q Consensus 204 ~-~~G~i~ly~S~Dl-~~W~~~-~~~l~ 228 (574)
. ..-.+.+++|+++ -.|+.. +.++.
T Consensus 206 ~~~~y~~~~a~s~~~~gp~~~~~~~pl~ 233 (294)
T cd08991 206 ENEDYGVGYATADSPLGPWTKYSNNPIL 233 (294)
T ss_pred CCCCceEEEEEcCCCCCCcEecCCCceE
Confidence 1 1114778888874 689875 23444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.6e-06 Score=88.88 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=79.8
Q ss_pred CCCeEeeeEEEcCCCe--eEEEEeeecCCCcc-eEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec
Q 008189 114 INGCWSGSATVLPGNK--PIILYTGVDHKERQ-VQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS 190 (574)
Q Consensus 114 ~~gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~ 190 (574)
...+|-+.|++. +|. ++|+|.+....... .+++|.|.|+ ++|++. .+||+.+...++.....||-|+..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 356999988864 555 89998887655444 8899999997 799886 579997766667778899998755
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEccc
Q 008189 191 NDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKH 225 (574)
Q Consensus 191 ~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~ 225 (574)
++.|||++.+......++.+.+|+|+.+|+..+.
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~ 134 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGK 134 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEEC
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEecc
Confidence 6899999988765566889999999999999874
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.1e-06 Score=85.94 Aligned_cols=89 Identities=19% Similarity=0.350 Sum_probs=63.8
Q ss_pred CCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEEEEEEeCCCCCCEEcccccccC-CCCCccccc
Q 008189 166 NNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGMAYLYRSRDFMKWTKAKHPIHSL-ANTGMWECP 239 (574)
Q Consensus 166 ~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~~G~i~ly~S~Dl~~W~~~~~~l~~~-~~~~~wEcP 239 (574)
++|||.+..+ ...+|||+|++..++|+|||+..... .....|.+|+|+||.+|+..+..+... ..+.+| +|
T Consensus 5 ~~pvl~~~~g--~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-AP 81 (276)
T cd08983 5 GNPVLTSTAG--TKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-AP 81 (276)
T ss_pred CceEEeCCcC--CCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-Cc
Confidence 6899976433 47899999876546889999876532 122358999999999999876533222 234567 99
Q ss_pred eeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 240 DFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 240 dlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
++|.....| +|+|.+|..
T Consensus 82 ev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 82 EAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred cceEcCCCC-------------eEEEEEecc
Confidence 999986333 899988864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.41 E-value=8e-06 Score=82.50 Aligned_cols=149 Identities=13% Similarity=0.081 Sum_probs=94.2
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC-
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK- 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~- 140 (574)
-+++++|+|||||.....+ ......+.|+|+|+.+|....... +... ...++..++++.+++|+++|+|.+....
T Consensus 63 ~v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~-~~~~-~~~~~iDp~vf~d~dg~~yl~~~~~~~~~ 138 (271)
T cd08978 63 EVIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIR-PPTS-NNGNSIDPTVFKDDDGKYYLYYGSGDPGA 138 (271)
T ss_pred eEEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccC-cCcc-CCCCccCcceEEcCCCCEEEEEecccCCC
Confidence 6788999999999987542 234579999999999997653211 1111 2246788999987669999999876421
Q ss_pred CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC--CeeEEEEEEeCCCC
Q 008189 141 ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK--HRGMAYLYRSRDFM 218 (574)
Q Consensus 141 ~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~--~~G~i~ly~S~Dl~ 218 (574)
....+.++.+.+. ..|.. ..+++..........+..|.+ ++ .+|+|||++.+... ..-.+.+++|++..
T Consensus 139 ~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~~~~s~~~~ 209 (271)
T cd08978 139 GFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIGYATSDSID 209 (271)
T ss_pred CCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEEEEECCCCC
Confidence 1234566666553 22222 234321111112235678995 45 57999999877542 23367888898874
Q ss_pred -CCEEc
Q 008189 219 -KWTKA 223 (574)
Q Consensus 219 -~W~~~ 223 (574)
-|+..
T Consensus 210 Gp~~~~ 215 (271)
T cd08978 210 GPYVKK 215 (271)
T ss_pred CCcCcC
Confidence 46654
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.34 E-value=5e-06 Score=84.96 Aligned_cols=121 Identities=15% Similarity=0.118 Sum_probs=72.3
Q ss_pred ccCCeeEEecCCCeEEEEEeeecC---------CeeEEEEEEeCCCCCCEEcccccccCC--------------CCCccc
Q 008189 181 FRDPTTAWWSNDGHWRMLVGSRRK---------HRGMAYLYRSRDFMKWTKAKHPIHSLA--------------NTGMWE 237 (574)
Q Consensus 181 fRDP~Vvw~~~~g~~~M~~g~~~~---------~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------------~~~~wE 237 (574)
+|||+|++. .+|.|||+..+... ..+.|.+|+|+||.+|+..+..+.... .....+
T Consensus 2 ~rDP~v~~~-~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVTLG-PDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEEec-CCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 799997544 57889988665421 124588999999999998775442111 123456
Q ss_pred cceeEEeccCCCCccccccCCCCceEEEEEeecCC--ceeEEEEEEEeCCCCccccCCCCCCCCcceecccCCCccceee
Q 008189 238 CPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT--RYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTF 315 (574)
Q Consensus 238 cPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~--~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~fYA~~t~ 315 (574)
+|+++.++ | +|+|.+|.... ......+..-+...++|+..... ..+. .-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~~--~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPLF--PGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCCC--CccCCceE
Confidence 99999987 6 89998886431 12233333323223456432110 0011 12446778
Q ss_pred eeCCCCcEEEE
Q 008189 316 FDSRKNRRILW 326 (574)
Q Consensus 316 ~~~~~gr~i~~ 326 (574)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 874 6777776
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-05 Score=81.52 Aligned_cols=151 Identities=12% Similarity=0.132 Sum_probs=97.0
Q ss_pred eeEEEC-CEEEEEEeeCCCCCCCCccEEEEeecCCcCC-ceecc-cccCCC--CCccCCCeEeeeEEEcCCCeeEEEEee
Q 008189 62 GPMYYK-GIYHLFYQYNPKGAVWGNIVWAHSVSKDLIN-WEALE-PALYPS--KPFDINGCWSGSATVLPGNKPIILYTG 136 (574)
Q Consensus 62 g~~~~~-G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~-W~~~~-~al~P~--~~~D~~gv~SGsav~~~dg~~~l~YTg 136 (574)
.+++.+ |+|+|||..... ..+....+.|+|+|+.. |++.. ..+.+. ...+...+..++++.+++|+++|+|.+
T Consensus 64 ~v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~~y~~~~~ 141 (286)
T cd08772 64 SIVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGKWYLVFGS 141 (286)
T ss_pred eEEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCCEEEEEcc
Confidence 567777 999999987643 22456799999999974 56542 112222 122334578899988766999999987
Q ss_pred ecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC----CeeEEEEE
Q 008189 137 VDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK----HRGMAYLY 212 (574)
Q Consensus 137 ~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~----~~G~i~ly 212 (574)
........+.+|.|+|. .+|++....+++.... ....+.-|.++ + .+|+|||++++... ..-.+.++
T Consensus 142 ~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~~y~~~~~ 212 (286)
T cd08772 142 GDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDSTYSIGYA 212 (286)
T ss_pred ccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCCCcceEEE
Confidence 64333456788998875 6887753222232221 23467889954 5 57999999987541 12356777
Q ss_pred EeCC-CCCCEEc
Q 008189 213 RSRD-FMKWTKA 223 (574)
Q Consensus 213 ~S~D-l~~W~~~ 223 (574)
+|++ +-.|+..
T Consensus 213 ~~~~~~g~~~~~ 224 (286)
T cd08772 213 RSESDTGPYVPK 224 (286)
T ss_pred EccCCCCCcccC
Confidence 7766 3456543
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.8e-05 Score=81.86 Aligned_cols=131 Identities=12% Similarity=0.040 Sum_probs=88.4
Q ss_pred eeEEEC-CEEEEEEeeCCCCCCCCccEEEEeecC-CcCCceecccc-cCCCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYK-GIYHLFYQYNPKGAVWGNIVWAHSVSK-DLINWEALEPA-LYPSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~-G~yHlfyq~~P~~~~~g~~~Wgha~S~-Dlv~W~~~~~a-l~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.++..+ |+|+|||..+......+....++|+|+ |+++|+..+.. +.+....+..+.-.+.++.+ +|+++|+|++..
T Consensus 67 sav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~-~g~~~m~~g~~~ 145 (298)
T cd08996 67 SAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWH-DGKWYMVLGAGT 145 (298)
T ss_pred eEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeE-CCEEEEEEEEEe
Confidence 445567 999999987643212245678999999 89999987532 22112223345678888875 699999999876
Q ss_pred CCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCC--CeEEEEEeeec
Q 008189 139 HKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSND--GHWRMLVGSRR 203 (574)
Q Consensus 139 ~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~--g~~~M~~g~~~ 203 (574)
........++.|+|. ++|+.. .++..... .....+.-|.+ ++ .+ ++|+|+++.+.
T Consensus 146 ~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~~-~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 146 EDGTGRILLYRSDDL-----KNWEYL--GELLTSLG-DFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred cCCCcEEEEEECCCC-----CCCEEc--ceecccCC-CccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 544457778888884 899975 45532111 12246788985 44 46 99999998764
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.2e-05 Score=80.00 Aligned_cols=124 Identities=11% Similarity=0.163 Sum_probs=75.0
Q ss_pred cCccCCeeEEecCCCeEEEEEeeecCC----eeEEEEEEeCCCCCCEEcccccccCC---CCCccccceeEEeccCCCCc
Q 008189 179 SAFRDPTTAWWSNDGHWRMLVGSRRKH----RGMAYLYRSRDFMKWTKAKHPIHSLA---NTGMWECPDFYPVSISGKNG 251 (574)
Q Consensus 179 ~~fRDP~Vvw~~~~g~~~M~~g~~~~~----~G~i~ly~S~Dl~~W~~~~~~l~~~~---~~~~wEcPdlf~l~~~g~~~ 251 (574)
..+|||+|++.+.+|.|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 458999987765689999997654211 12378999999999998875443221 12356789999886 5
Q ss_pred cccccCCCCceEEEEEeecCCc----eeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEE
Q 008189 252 LDTSFAGGNEKFVLKVSLDLTR----YDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILW 326 (574)
Q Consensus 252 ~~~~~~~~~~k~vl~~s~~~~~----~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~ 326 (574)
+|+|.++..... ...+.+.+ ...++|+..... .....+. ..-+..|.|. +|+..|+
T Consensus 79 ----------~yyly~s~~~~~~~~~~~~va~s~--~p~GP~~~~~~~------~~~~~~~~~iDp~~f~Dd-DG~~Yl~ 139 (291)
T cd08981 79 ----------RYYMFATFHNPGGERRGTAILVSD--SPEGPFVPHSDG------PVTPEDWMCLDGTLYVDE-DGKPWMV 139 (291)
T ss_pred ----------EEEEEEEeccCCCceeeEEEEECC--CCCCCCEeCCCC------ccCCCCCceEcCceEEcC-CCCEEEE
Confidence 899988764322 22333332 223455421100 0111122 3456678874 6888775
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.3e-05 Score=78.96 Aligned_cols=78 Identities=23% Similarity=0.389 Sum_probs=55.9
Q ss_pred CceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccC---------CCCCccc
Q 008189 167 NPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSL---------ANTGMWE 237 (574)
Q Consensus 167 ~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~---------~~~~~wE 237 (574)
||||. ..+.||.|+. .++.|||+.+..... ..+.+|+|+||.+|+..+..+... ..+++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~-~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWF-PGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccC-CCcEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 57763 3578999764 478999997653322 237899999999999987544221 123467
Q ss_pred cceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 238 CPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 238 cPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
+|+++.++ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999986 6 899988864
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.12 E-value=8.4e-05 Score=76.53 Aligned_cols=147 Identities=12% Similarity=0.072 Sum_probs=89.6
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCc--CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL--INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl--v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.+.+.+|+|||||..+..+. .....++|+|+|+ -.|+..++++.+........+..++++.++||++||+|.+...
T Consensus 62 ~v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~~~~~~~ 139 (288)
T cd08998 62 DVIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLSFGSFWG 139 (288)
T ss_pred eEEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEEeeeccC
Confidence 56788999999998764332 3456899999998 7999987666554322234567888988778999999976421
Q ss_pred CCcceEEEEEe-cCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C---Cee-EEEEEE
Q 008189 140 KERQVQNYAVP-ANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-K---HRG-MAYLYR 213 (574)
Q Consensus 140 ~~~~~q~lA~s-~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~---~~G-~i~ly~ 213 (574)
.+.++.. .|.+.+ ..+... ...++..+. .......|++ ++ .+|+|||++++.. . ..+ ++.+++
T Consensus 140 ----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~y~v~~~~ 208 (288)
T cd08998 140 ----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDSTYNIRVGR 208 (288)
T ss_pred ----CEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCceEEEEEE
Confidence 2333332 332211 122110 011222221 1134578995 45 5899999987532 1 112 578999
Q ss_pred eCCCC-CCE
Q 008189 214 SRDFM-KWT 221 (574)
Q Consensus 214 S~Dl~-~W~ 221 (574)
|+++. -|+
T Consensus 209 s~~~~GP~~ 217 (288)
T cd08998 209 SKSITGPYV 217 (288)
T ss_pred cCCCCCCcC
Confidence 98864 355
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00022 Score=72.68 Aligned_cols=142 Identities=12% Similarity=0.135 Sum_probs=89.0
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
-++|. +|+|||||...... .+....|+|+|++.. -|+.++..+ |. ......+++++++||+.||+|.+..
T Consensus 69 ~v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~~~~~~ 141 (265)
T cd08985 69 KVIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLLYSDRD 141 (265)
T ss_pred eEEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEEEecCC
Confidence 45554 59999999987532 246689999999874 688776443 21 1345678898888899999998652
Q ss_pred CCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC-eeEEEEEEeCCC
Q 008189 139 HKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH-RGMAYLYRSRDF 217 (574)
Q Consensus 139 ~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~-~G~i~ly~S~Dl 217 (574)
.....++.-++. +..+. +.+.... .......|. +++ .+|.|||+.+..... ...+..++|+++
T Consensus 142 ---~~~i~i~~L~~d----~~~~~---~~~~~~~----~~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~~~~y~~s~s~ 205 (265)
T cd08985 142 ---NSDLYIYRLTDD----YLSVT---GEVTTVF----VGAGREAPA-IFK-RNGKYYLLTSGLTGWNPNDARYATATSI 205 (265)
T ss_pred ---CCceEEEEeCCC----ccccc---ceEEEcc----CCCccccce-EEE-ECCEEEEEEccCCCccCCceEEEEecCC
Confidence 123445543321 23332 2333211 113567898 456 689999998765321 224677888886
Q ss_pred C-CCEEcccc
Q 008189 218 M-KWTKAKHP 226 (574)
Q Consensus 218 ~-~W~~~~~~ 226 (574)
. -|+..+.+
T Consensus 206 ~GP~~~~~~~ 215 (265)
T cd08985 206 LGPWTDLGNP 215 (265)
T ss_pred CCCccccCcC
Confidence 4 67766543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.6e-05 Score=78.37 Aligned_cols=78 Identities=21% Similarity=0.434 Sum_probs=56.7
Q ss_pred CCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEec
Q 008189 166 NNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 166 ~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.||||. ..+.||.|++ .++.|||+..+. +..+.+.+|+|+||.+|+..+..+ ....+.+| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~--~~~~yY~~~t~~-~~~~gi~i~~S~DL~~W~~~g~~~-~~~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILR--DGEDYYMTHSSF-KYTPGLVIWHSRDLVNWTPVGPAL-PEYEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEE--ECCEEEEEEcch-hcCCCEEEEECCCcCCceEccccc-cCCCCCEE-cCeeEEEC
Confidence 478885 2467999764 378999976542 222358899999999999987533 23345688 79999986
Q ss_pred cCCCCccccccCCCCceEEEEEeec
Q 008189 246 ISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 246 ~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
| ||+|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 5 899988864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00023 Score=72.77 Aligned_cols=138 Identities=9% Similarity=0.055 Sum_probs=86.3
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-Ccee-cc-cccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEA-LE-PALYPSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~-~~-~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.+++++|+|+|||..+ ...++|+|+|.. .|++ .+ +.+.+.. ......+++++.+.||+++|+|.+..
T Consensus 70 ~v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~~~~~ 139 (275)
T cd09004 70 SVIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYWGGWG 139 (275)
T ss_pred eEEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEEcCcC
Confidence 6788999999999865 358999999975 7887 33 3333321 12345678888877899999997531
Q ss_pred CCCcceEEE-EEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C-CeeEEEEEEeC
Q 008189 139 HKERQVQNY-AVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-K-HRGMAYLYRSR 215 (574)
Q Consensus 139 ~~~~~~q~l-A~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~-~~G~i~ly~S~ 215 (574)
...+ ..+.|. .+|+.. ..++.... ...+.-|.+ ++ .+|+|||++++.. . ..-++.+++|+
T Consensus 140 -----~~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ya~s~ 202 (275)
T cd09004 140 -----HCNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAYAMAD 202 (275)
T ss_pred -----CEEEEEECCCc-----ccccCc--ceeeeccC---CCceecceE-EE-ECCEEEEEEECCCCCCCCceEEEEEcC
Confidence 1223 344443 556532 11221111 124578985 45 5899999988753 1 12257778888
Q ss_pred CCC-CCEEcccc
Q 008189 216 DFM-KWTKAKHP 226 (574)
Q Consensus 216 Dl~-~W~~~~~~ 226 (574)
++. -|+....+
T Consensus 203 ~~~GP~~~~~~~ 214 (275)
T cd09004 203 SPLGPFERPGNI 214 (275)
T ss_pred CCCCCcccCCcE
Confidence 864 48775533
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00013 Score=74.68 Aligned_cols=151 Identities=12% Similarity=0.093 Sum_probs=92.6
Q ss_pred ceeeeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 59 WINGPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 59 w~Ng~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
|.-.+++.+|+|||||...... .....+.|+|++.. .|+..+....+ ...+..+++++++||+.||+|.+.
T Consensus 68 WAP~i~~~~g~yy~y~~~~~~~---~~~~~~va~a~~~~Gp~~~~~~~~~~-----~~~~iD~~vf~d~dG~~Yl~~~~~ 139 (286)
T PF04616_consen 68 WAPEIHYINGKYYMYYSDSGGD---AGSGIGVATADSPDGPWTDPGKIPIP-----GGNSIDPSVFVDDDGKYYLYYGSW 139 (286)
T ss_dssp EEEEEEEETTEEEEEEEEESTS---TTEEEEEEEESSTTS-EEEEEEEEEE-----SSSSSSEEEEEETTSEEEEEEEES
T ss_pred cCCeEEEcCCeEEEEEEccCCC---CCcceeEEEeCCcccccccccceeec-----cccccCceEEEecCCCcEEeCccc
Confidence 4445778899999999922111 23458889998885 99987654433 244677899988779999999986
Q ss_pred cCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEEeC
Q 008189 138 DHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYRSR 215 (574)
Q Consensus 138 ~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~S~ 215 (574)
... ..+.+.++...+.. .++.......+.............-|++ ++ .+|+|||++++.. ...-++.+++|+
T Consensus 140 ~~~~~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~~Egp~~-~k-~~g~yYl~~s~~~~~~~y~v~~~~s~ 213 (286)
T PF04616_consen 140 DNGDPGGGIYIAELDPDG----TSLTGEPVVVIFPGDEGWDGGVVEGPFV-FK-HGGKYYLFYSAGGTGSPYQVGYARSD 213 (286)
T ss_dssp TTTSSEEEEEEEEEETTT----SSEEEEECEEEEEESGSSTTTBEEEEEE-EE-ETTEEEEEEEESGSSTTTEEEEEEES
T ss_pred CCCccceeEEeecccCcc----ccccCcccccccccccccCCccccceEE-EE-cCCCEEEEEeccCCCCCceEEEeecc
Confidence 532 23344555443321 3344321122223221222344567885 45 5899999998654 222357789999
Q ss_pred CCCC-CEEc
Q 008189 216 DFMK-WTKA 223 (574)
Q Consensus 216 Dl~~-W~~~ 223 (574)
++.. |+..
T Consensus 214 ~~~gp~~~~ 222 (286)
T PF04616_consen 214 SPLGPWEWK 222 (286)
T ss_dssp STTSGGEET
T ss_pred CCCCceeec
Confidence 9875 4543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0003 Score=74.10 Aligned_cols=152 Identities=16% Similarity=0.196 Sum_probs=95.0
Q ss_pred eeEEE-CCEEEEEEeeCCCCC---CCCccEEEEeecCCcC----CceecccccCCCCC-cc-------------CCCeEe
Q 008189 62 GPMYY-KGIYHLFYQYNPKGA---VWGNIVWAHSVSKDLI----NWEALEPALYPSKP-FD-------------INGCWS 119 (574)
Q Consensus 62 g~~~~-~G~yHlfyq~~P~~~---~~g~~~Wgha~S~Dlv----~W~~~~~al~P~~~-~D-------------~~gv~S 119 (574)
..++. +|+|||||-.+-... ..-....++++++|+. .|+.+...+.+++. |+ ....-.
T Consensus 75 sa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRD 154 (349)
T cd08997 75 SATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRD 154 (349)
T ss_pred eEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccC
Confidence 33444 599999999874311 1235669999999984 45444445556542 21 122345
Q ss_pred eeEEEcC-CCeeEEEEeeecCCC---------------------------cceEEEEEecCCCCcccceeeccCCCceEe
Q 008189 120 GSATVLP-GNKPIILYTGVDHKE---------------------------RQVQNYAVPANPSDPYLRKWIKPDNNPVVF 171 (574)
Q Consensus 120 Gsav~~~-dg~~~l~YTg~~~~~---------------------------~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~ 171 (574)
+.++.++ +|+.||+++++.... .-.+++|++++. .+.+|+-+ .|++.
T Consensus 155 P~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~ 229 (349)
T cd08997 155 PFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLE 229 (349)
T ss_pred CEEEecCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--Ccccc
Confidence 6777764 588999999875421 124567777642 25789875 58886
Q ss_pred cCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-------CeeEEEEEEeCCCC-CCEE
Q 008189 172 PGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-------HRGMAYLYRSRDFM-KWTK 222 (574)
Q Consensus 172 ~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~-------~~G~i~ly~S~Dl~-~W~~ 222 (574)
+... ...+.+|.+ ++ .+|+|||+..++.. +...+..|.|++|. -|+.
T Consensus 230 a~~v--~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 230 ANGV--NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred CCCc--CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 4321 245889995 45 59999999875542 11135667888874 4554
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00016 Score=79.26 Aligned_cols=131 Identities=12% Similarity=0.104 Sum_probs=83.3
Q ss_pred eeEEECCEEEEEEeeCCCCCCC-CccEEEEeecCCcCCceecc-cccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVW-GNIVWAHSVSKDLINWEALE-PALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~-g~~~Wgha~S~Dlv~W~~~~-~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
..+..+|++||||..+.....+ ....-++|+|+|+.+|+..+ ++|.+.......+.-.+.++. .+|+++|++.+...
T Consensus 90 sav~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~~~~ 168 (445)
T TIGR01322 90 SAVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGAQTE 168 (445)
T ss_pred eEEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEEecC
Confidence 5556899999999986532222 22345689999999999876 455543221112344667765 48999999987643
Q ss_pred CCcceEEEEEecCCCCcccceeeccCCCceEecCC---CCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 140 KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGP---DVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 140 ~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~---~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
.......+..|+| |++|+.. +++..+.. +.....|.-|-+ +. -+++|+|+++..
T Consensus 169 ~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 169 TEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS-LDGQDVLLFSPQ 225 (445)
T ss_pred CCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE-EE-ECCcEEEEEecc
Confidence 3333446677766 4899985 45653320 111135778874 44 578999998754
|
|
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0018 Score=66.24 Aligned_cols=130 Identities=11% Similarity=0.086 Sum_probs=79.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCc-CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL-INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 140 (574)
.+++.+|+|||||-.+. .+.+.|+|++. =.|++++... ....++++.+.||+.||+|.+.
T Consensus 80 ~v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~--- 140 (269)
T cd09001 80 SLRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG--- 140 (269)
T ss_pred ceEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC---
Confidence 67888999999998751 13556777775 3787765322 2456788888889999999653
Q ss_pred CcceEEEE-EecCCCCcccceeeccCCCc-eEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCC
Q 008189 141 ERQVQNYA-VPANPSDPYLRKWIKPDNNP-VVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFM 218 (574)
Q Consensus 141 ~~~~q~lA-~s~D~~d~~l~~w~k~~~~P-vi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~ 218 (574)
.+.++ .+.|. ..... ..+ ++..+.. ......-|++ ++ .+|.|||++++.......+.+++|+++.
T Consensus 141 ---~i~~~~l~~d~-----~~~~~--~~~~~~~~~~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s~~~~ 207 (269)
T cd09001 141 ---TIRLVELSPDL-----TGVGG--KDQVIIDAGEE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRSKSLT 207 (269)
T ss_pred ---cEEEEEECccc-----CCcCC--CceEEEeCCCc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEeCCCC
Confidence 23444 33332 22211 223 3333221 1234578885 46 6899999988753222356788998865
Q ss_pred -CCEEc
Q 008189 219 -KWTKA 223 (574)
Q Consensus 219 -~W~~~ 223 (574)
-|+..
T Consensus 208 GP~~~~ 213 (269)
T cd09001 208 GPYESK 213 (269)
T ss_pred CCcCCc
Confidence 36543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00069 Score=73.94 Aligned_cols=153 Identities=25% Similarity=0.383 Sum_probs=88.1
Q ss_pred EEEeecCCcCCceecccccCCCC------C-ccCCCeEeeeEEEcCCCeeEEEEeeecCCC---cceEEEEEecCCCCcc
Q 008189 88 WAHSVSKDLINWEALEPALYPSK------P-FDINGCWSGSATVLPGNKPIILYTGVDHKE---RQVQNYAVPANPSDPY 157 (574)
Q Consensus 88 Wgha~S~Dlv~W~~~~~al~P~~------~-~D~~gv~SGsav~~~dg~~~l~YTg~~~~~---~~~q~lA~s~D~~d~~ 157 (574)
-.-+.|+||+||+.+...|.+.. . -+..|||.+++. ..||+++|+||...... .......++....+
T Consensus 55 l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~-- 131 (549)
T COG3507 55 LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID-- 131 (549)
T ss_pred eeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC--
Confidence 34567999999999877666543 2 245789999987 58999999998765422 11112222222111
Q ss_pred cceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC------eeEEEEEEeC---CCCCCEEcccccc
Q 008189 158 LRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH------RGMAYLYRSR---DFMKWTKAKHPIH 228 (574)
Q Consensus 158 l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~------~G~i~ly~S~---Dl~~W~~~~~~l~ 228 (574)
-.|.. |+.-+.. .--||.+++ +++|+-+|+.+..... .+.++-+.++ .|..+.+ + .+.
T Consensus 132 -G~WsD----pi~l~~~-----~~iDPslf~-D~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~~ 198 (549)
T COG3507 132 -GPWSD----PIKLNGS-----NAIDPSLFF-DKDGRKWLVNGSWDGGIFMHSFAGIILQEYDKTTQKLVGQGY-K-IIF 198 (549)
T ss_pred -CCccc----ceecCCc-----CccCCceee-cCCCCEEEEecccCCCcccccccceeeeeccccccccCCccc-e-eEe
Confidence 35653 4442221 135999654 4789888898876421 1222222221 1223321 1 123
Q ss_pred cCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 229 SLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 229 ~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.+......|-|-+++.+ | .++|+.+...
T Consensus 199 ~G~~~~~~EGPhl~k~~--g-------------YYYL~~a~gG 226 (549)
T COG3507 199 DGGNGGLTEGPHLYKKT--G-------------YYYLYVAEGG 226 (549)
T ss_pred ccCCCccccCceeeccC--C-------------EEEEEEEcCC
Confidence 33344578999888876 4 7777766544
|
|
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0015 Score=67.12 Aligned_cols=141 Identities=11% Similarity=0.142 Sum_probs=82.6
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-C-----ceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-N-----WEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~-----W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+.+++|+|||||.....+. ....+|.|+|++.. - |+..++.+.+... +......+++++++||++||+|.
T Consensus 61 ~v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Yl~~g 137 (279)
T cd08988 61 DIYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPWLSFG 137 (279)
T ss_pred eEEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEEEEec
Confidence 67889999999998765432 34578999999863 3 5543344433322 12345688999988899999996
Q ss_pred eecCCCcceEEEEEecCCCCcccceeeccCCC--ceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeE
Q 008189 136 GVDHKERQVQNYAVPANPSDPYLRKWIKPDNN--PVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGM 208 (574)
Q Consensus 136 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~--Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~~G~ 208 (574)
.... + ....-.+.|.. .... .+. .++..+. +.....-|++ ++ .+|+|||++++.. +..-+
T Consensus 138 ~~~~-g--i~~~eL~~d~~-----~~~~-~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~~~~~y~ 204 (279)
T cd08988 138 SFWG-G--IKLFELDKDTM-----KPAE-PGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRGGDSTYK 204 (279)
T ss_pred ccCC-C--EEEEEECcccC-----CccC-CCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCCCCCCeE
Confidence 5321 1 22223333321 1100 111 1222211 1134567884 56 5899999887542 12236
Q ss_pred EEEEEeCCCC
Q 008189 209 AYLYRSRDFM 218 (574)
Q Consensus 209 i~ly~S~Dl~ 218 (574)
+.+++|+++.
T Consensus 205 v~~arS~~~~ 214 (279)
T cd08988 205 IAVGRSKNIT 214 (279)
T ss_pred EEEEEeCCCC
Confidence 8899998874
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.003 Score=65.95 Aligned_cols=146 Identities=12% Similarity=0.083 Sum_probs=86.4
Q ss_pred eeEEEC----CEEEEEEeeCCCCCCCCccEEEEeecCCcC-Cceec-cccc-CCCC-Ccc-CCCeEeeeEEEcCCCeeEE
Q 008189 62 GPMYYK----GIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEAL-EPAL-YPSK-PFD-INGCWSGSATVLPGNKPII 132 (574)
Q Consensus 62 g~~~~~----G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~-~~al-~P~~-~~D-~~gv~SGsav~~~dg~~~l 132 (574)
.+++++ |+|+|||... ....+.|+|++.. .|+++ +..| .+.. ..+ ......+++++++||+.||
T Consensus 82 ~v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG~~Yl 154 (311)
T cd09003 82 SIAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDGQGYL 154 (311)
T ss_pred ceEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCCCEEE
Confidence 678888 9999999632 2358999999964 89975 3222 2211 111 1224678888888999999
Q ss_pred EEeeecC----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----
Q 008189 133 LYTGVDH----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR----- 203 (574)
Q Consensus 133 ~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~----- 203 (574)
+|.+... ...+...+|..++. +.+. .+.++....+ ..+.-|++ ++ .+|.|||++++..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D----~~~~---~g~~~~i~~~----~~~Egp~~-~K-~~G~YYL~ys~~~~~~~~ 221 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDD----MISV---DGSAVTIDAP----YFFEASGL-HK-INGTYYYSYCTNFGGRDP 221 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCC----ceec---cCCceEccCC----CceEeeeE-EE-ECCEEEEEEeCCCCccCC
Confidence 9975321 11133445544321 1222 2233332111 34678884 55 6999999987542
Q ss_pred --CCeeEEEEEEeCCCC-CCEEccccc
Q 008189 204 --KHRGMAYLYRSRDFM-KWTKAKHPI 227 (574)
Q Consensus 204 --~~~G~i~ly~S~Dl~-~W~~~~~~l 227 (574)
....++.+++|++.. -|+..+.++
T Consensus 222 ~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 222 GKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CCCCceeEEEEEcCCCCCCcccCCEec
Confidence 223467777887754 587755433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0026 Score=65.45 Aligned_cols=151 Identities=15% Similarity=0.157 Sum_probs=83.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCC----cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKD----LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~D----lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.+.+++|+|||||...-.+ .......+.++|++ +-.|++.+..+.+.. .....++++.+ +|++||+|.+.
T Consensus 59 ~i~~~~g~yylyys~~~~~-~~~~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~d-dG~~Yl~~~~~ 132 (288)
T cd08980 59 ELHYIDGKWYIYFAAGDGG-GNANHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFEH-NGQLYFVWSGW 132 (288)
T ss_pred eEEEECCEEEEEEEccCCC-CCcceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEEE-CCEEEEEEEcc
Confidence 5678899999999865432 11233455666653 568998765442221 34577888875 79999999875
Q ss_pred cC--CCcceEEEEEecCCCCcccceeeccCCCceE-ecC-CCCCC---cCccCCeeEEecCCCeEEEEEeeecC-Cee-E
Q 008189 138 DH--KERQVQNYAVPANPSDPYLRKWIKPDNNPVV-FPG-PDVNA---SAFRDPTTAWWSNDGHWRMLVGSRRK-HRG-M 208 (574)
Q Consensus 138 ~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi-~~~-~~~~~---~~fRDP~Vvw~~~~g~~~M~~g~~~~-~~G-~ 208 (574)
.. .......++...+. .++. +.++. ..+ ..++. ....-|+++ + .+|.|||++++..- ... +
T Consensus 133 ~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~~-k-~~G~yYl~yS~~~~~~~~Y~ 202 (288)
T cd08980 133 EGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAAL-K-RNGKVFLTYSASGSWTPDYC 202 (288)
T ss_pred CCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEEE-E-ECCEEEEEEECCCCCCCCCE
Confidence 42 12233444544332 2332 23333 222 22221 124578854 4 47999999987542 111 4
Q ss_pred EEEEEeC---C-C--CCCEEcccccc
Q 008189 209 AYLYRSR---D-F--MKWTKAKHPIH 228 (574)
Q Consensus 209 i~ly~S~---D-l--~~W~~~~~~l~ 228 (574)
+.+++|+ + + ..|+..+.++.
T Consensus 203 v~~a~~~~~~~~~~~~~~~~~~~pil 228 (288)
T cd08980 203 LGLLTADGGADLLDPASWTKSPTPVF 228 (288)
T ss_pred EEEEEEcCCCCCCChhhCcCCCCCce
Confidence 5555554 2 2 23765444443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00051 Score=75.20 Aligned_cols=132 Identities=13% Similarity=0.151 Sum_probs=82.7
Q ss_pred eeEEECCEEEEEEeeCC-CCC--CCCcc-EEEEeecCCcCCceec--ccccCCCCCccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNP-KGA--VWGNI-VWAHSVSKDLINWEAL--EPALYPSKPFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P-~~~--~~g~~-~Wgha~S~Dlv~W~~~--~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.++..+|+|||||..+- ... ..... .-.+|+|+|+.+|+.. .++|.+...+.....-.+.++..++|+++|++.
T Consensus 73 sav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g 152 (437)
T smart00640 73 SAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIG 152 (437)
T ss_pred EEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEE
Confidence 45567889999998763 211 12222 2367899999999997 356655432222334456666543469999998
Q ss_pred eecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC-----eEEEEEeee
Q 008189 136 GVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG-----HWRMLVGSR 202 (574)
Q Consensus 136 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g-----~~~M~~g~~ 202 (574)
+........+.+..|+| |++|+.. +++.....+.....|..|-. +. -++ +|+|+++.+
T Consensus 153 ~~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~~~~~g~~wECPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 153 ASDEDKTGIALLYRSTD-----LKNWTLL--GELLHSGVGDTGGMWECPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EEecCCCeEEEEEECCC-----cccCeEC--CcccccCCCCccceEECCcE-EE-eCCCCCceeEEEEECcC
Confidence 76544445677888877 4899875 45554311111146778874 33 344 899998876
|
|
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00064 Score=69.08 Aligned_cols=103 Identities=16% Similarity=0.273 Sum_probs=79.5
Q ss_pred CeEeeeEEEcCCCeeEEEEeeec-----CCCcceEEEEEecCCCCcccce-eeccCCCceEec-CCCCCCcCccCCeeEE
Q 008189 116 GCWSGSATVLPGNKPIILYTGVD-----HKERQVQNYAVPANPSDPYLRK-WIKPDNNPVVFP-GPDVNASAFRDPTTAW 188 (574)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~-----~~~~~~q~lA~s~D~~d~~l~~-w~k~~~~Pvi~~-~~~~~~~~fRDP~Vvw 188 (574)
++|-++++. .++++.|+|-... ........+|.|+|+ .+ |++. .+|++.+ ...++.....||-|+
T Consensus 30 ~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~P~~~~~e~~G~EDPRvt- 101 (314)
T COG2152 30 SVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLWPANYPYEIYGIEDPRVT- 101 (314)
T ss_pred EEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEecCCCchhhhcccCceEE-
Confidence 689998887 4899999888732 234567789999987 55 9987 4798876 334566788999965
Q ss_pred ecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEccccc
Q 008189 189 WSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPI 227 (574)
Q Consensus 189 ~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l 227 (574)
+ .+++|+|.+.+..+.+.+..+..+.|+.+|++.+..+
T Consensus 102 ~-I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 102 K-IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred E-ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 4 5899999999986555577899999999999987543
|
|
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.017 Score=58.60 Aligned_cols=167 Identities=19% Similarity=0.250 Sum_probs=95.0
Q ss_pred CCcee-eeEEE-CCEEEEEEeeCCCCCCCCccEEEEeecCC-cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEE
Q 008189 57 KHWIN-GPMYY-KGIYHLFYQYNPKGAVWGNIVWAHSVSKD-LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIIL 133 (574)
Q Consensus 57 ~gw~N-g~~~~-~G~yHlfyq~~P~~~~~g~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~ 133 (574)
..+.| -+++. +|+.||||........|......+.+|+| +.+|+... .|.++......+...+.++...+|++++-
T Consensus 46 ~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~ 124 (275)
T PF13088_consen 46 RRYGNPSLVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAP 124 (275)
T ss_dssp CEEEEEEEEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEE
T ss_pred CcccCcEEEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEE
Confidence 34555 44543 99999999666555444444555589999 79999764 23222111223344554455568887764
Q ss_pred -EeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 008189 134 -YTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLY 212 (574)
Q Consensus 134 -YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly 212 (574)
|.. . .......+.+|.|++ ++|+... ++. .....--|.++.. .+|..+|++... . .+.+.++
T Consensus 125 ~~~~-~-~~~~~~~~~~S~D~G----~tW~~~~--~~~------~~~~~~e~~~~~~-~dG~l~~~~R~~-~-~~~~~~~ 187 (275)
T PF13088_consen 125 YYHE-S-GGSFSAFVYYSDDGG----KTWSSGS--PIP------DGQGECEPSIVEL-PDGRLLAVFRTE-G-NDDIYIS 187 (275)
T ss_dssp EEEE-S-SCEEEEEEEEESSTT----SSEEEEE--ECE------CSEEEEEEEEEEE-TTSEEEEEEEEC-S-STEEEEE
T ss_pred Eeec-c-ccCcceEEEEeCCCC----ceeeccc--ccc------ccCCcceeEEEEC-CCCcEEEEEEcc-C-CCcEEEE
Confidence 433 1 233566778999986 8998742 221 0112334554333 688888887654 2 1267788
Q ss_pred EeCC-CCCCEEcccccccCCCCCccccceeEEec
Q 008189 213 RSRD-FMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 213 ~S~D-l~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.|.| +.+|+... +... ...-.++.++++.
T Consensus 188 ~S~D~G~TWs~~~-~~~~---~~~~~~~~~~~~~ 217 (275)
T PF13088_consen 188 RSTDGGRTWSPPQ-PTNL---PNPNSSISLVRLS 217 (275)
T ss_dssp EESSTTSS-EEEE-EEEC---SSCCEEEEEEECT
T ss_pred EECCCCCcCCCce-eccc---CcccCCceEEEcC
Confidence 8877 78998642 1111 1112456666765
|
... |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.012 Score=60.53 Aligned_cols=139 Identities=14% Similarity=0.030 Sum_probs=83.8
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCc-CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL-INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 140 (574)
.+++++|+|||||...... +....+.++|+|. --|++.. +.+. .+..++++.++||+.||+|......
T Consensus 72 ~v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~~~--~~~~------~~iDp~vf~d~dG~~Y~~~~~~~~~ 140 (288)
T cd09000 72 TIRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSDPV--WLDS------GGIDPSLFFDDDGKVYLVGNGWDER 140 (288)
T ss_pred eEEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcCCE--ecCC------CccCCceeEcCCCCEEEEecccCCc
Confidence 6788899999999876532 2335667888887 4787422 2221 4567888887789999988654321
Q ss_pred ----CcceEEEEEecCCCCcccceeeccCCCc--eEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEE
Q 008189 141 ----ERQVQNYAVPANPSDPYLRKWIKPDNNP--VVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYR 213 (574)
Q Consensus 141 ----~~~~q~lA~s~D~~d~~l~~w~k~~~~P--vi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~ 213 (574)
+...+.++..+. ..++-. +.| +..... .....-|.| ++ .+|+|||++.... ...-++.+++
T Consensus 141 ~~~~~~~~i~~~~l~~------~~~~~~-~~~~~~~~~~~---~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v~~~~ 208 (288)
T cd09000 141 RGYNGHGGIWLQEIDL------ETGKLL-GEPKVIWNGTG---GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSVTVAR 208 (288)
T ss_pred cccCCCCcEEEEEEcc------ccCCCC-CCcEEEEeCCC---CCCcccCeE-EE-ECCEEEEEEecCCCCCCeEEEEEE
Confidence 123445554322 122221 223 222111 134467885 56 6899999986543 2223678999
Q ss_pred eCCCC-CCEEc
Q 008189 214 SRDFM-KWTKA 223 (574)
Q Consensus 214 S~Dl~-~W~~~ 223 (574)
|+++. -|+..
T Consensus 209 s~~~~Gp~~~~ 219 (288)
T cd09000 209 SRSITGPYEPA 219 (288)
T ss_pred eCCCCCCCccC
Confidence 99986 67653
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.041 Score=58.04 Aligned_cols=164 Identities=18% Similarity=0.200 Sum_probs=97.9
Q ss_pred CcccccceeecC----CCcee-eeEEEC-CEEEEEEeeCCCCC-------CCCccEEEEeecCCc-CCceecccccCCCC
Q 008189 45 QLHRTAFHFQPP----KHWIN-GPMYYK-GIYHLFYQYNPKGA-------VWGNIVWAHSVSKDL-INWEALEPALYPSK 110 (574)
Q Consensus 45 ~~~RP~~H~~p~----~gw~N-g~~~~~-G~yHlfyq~~P~~~-------~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~ 110 (574)
..|.+.--+... ...+| .++... |+.+|||...+... .+...+..+..|+|. .+|.. |..|.+..
T Consensus 58 ~tW~~~~~i~~~~~~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 58 KTWSPSTVISDGDGKSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred CcccccEEehhcCCCCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 466665333333 34566 667776 99999998887642 123556778888886 89985 33343332
Q ss_pred C-ccCCCeE--eeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeE
Q 008189 111 P-FDINGCW--SGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTA 187 (574)
Q Consensus 111 ~-~D~~gv~--SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vv 187 (574)
. .+....+ .|+.++..+|++++.+.+....+.....+.+|+|.| ++|+... +. . + ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~-~-~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV-N-D----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC-C-C----CCCCcCCEEE
Confidence 1 0111222 233455567888775544433334566778898875 8997632 11 1 1 1234567765
Q ss_pred EecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcc
Q 008189 188 WWSNDGHWRMLVGSRRKHRGMAYLYRSRD-FMKWTKAK 224 (574)
Q Consensus 188 w~~~~g~~~M~~g~~~~~~G~i~ly~S~D-l~~W~~~~ 224 (574)
-. .+|..+|+..... .+.+.+|.|.| +..|+...
T Consensus 205 el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~ 239 (351)
T cd00260 205 EL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEAL 239 (351)
T ss_pred Ee-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCc
Confidence 33 5888888776543 35567888877 58998643
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.054 Score=53.58 Aligned_cols=184 Identities=17% Similarity=0.289 Sum_probs=100.3
Q ss_pred eecCCCcee----eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEE-cCC
Q 008189 53 FQPPKHWIN----GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATV-LPG 127 (574)
Q Consensus 53 ~~p~~gw~N----g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~-~~d 127 (574)
..|..||.. -.+++||+||+|....-.+.. ||...=.-+-+|.+...|-.- .-+ .+.-.+.++. .+.
T Consensus 16 ~~Pk~g~~slKD~T~V~ynGk~~VyAtt~d~~~~-----y~sm~f~~Ftdws~~~sA~q~--~m~-~~~vAP~vFYFaPk 87 (271)
T PF03664_consen 16 AQPKSGWVSLKDFTIVPYNGKHHVYATTADTGGG-----YGSMNFGPFTDWSQMASASQN--YMD-QSAVAPQVFYFAPK 87 (271)
T ss_pred ccCCCCceeccCceEEeECCEEEEEEEeccCCCc-----cceEeeeccCCHHHhhccccc--cCC-cccccceEEEecCC
Confidence 346678988 778899999999987754444 443333345578776543221 112 1222233322 256
Q ss_pred CeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee
Q 008189 128 NKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRG 207 (574)
Q Consensus 128 g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G 207 (574)
+.+||.|--.. ..-...++.|.+++ ..|... .|++...-.......-|..|+-+ +..-||+.+.. .|
T Consensus 88 ~~W~L~yQwg~----~~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~D---nG 154 (271)
T PF03664_consen 88 NIWYLAYQWGP----AAFSYSTSSDPTNP--NGWSAP--QPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAGD---NG 154 (271)
T ss_pred cEEEEEEecCC----CcceeecCCCCCCC--ccCCCC--cccccccccCCCCCceeeEEEec--CCceEEEEcCC---CC
Confidence 77888886321 11123456777666 468763 56653211111244578887643 33445554432 25
Q ss_pred EEEEEEeCC-CCCCEE----cccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC
Q 008189 208 MAYLYRSRD-FMKWTK----AKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT 272 (574)
Q Consensus 208 ~i~ly~S~D-l~~W~~----~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~ 272 (574)
+ ||+|.- +.+.-. ....+.+......+|.++++++. | ..++.|++-..+.
T Consensus 155 k--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G-----------~~~YLmiVEaiGs 209 (271)
T PF03664_consen 155 K--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--G-----------QNQYLMIVEAIGS 209 (271)
T ss_pred c--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--C-----------CceEEEEEEEecC
Confidence 4 788743 222210 00112222334589999999997 5 2378888776443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.24 Score=50.08 Aligned_cols=161 Identities=15% Similarity=0.095 Sum_probs=86.4
Q ss_pred CEEEEEEeeCCCCCCCCccEEEEeec--CCc-CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC---C
Q 008189 68 GIYHLFYQYNPKGAVWGNIVWAHSVS--KDL-INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK---E 141 (574)
Q Consensus 68 G~yHlfyq~~P~~~~~g~~~Wgha~S--~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~ 141 (574)
|+...++.. +...+.....-..| +|. .+|.....+..+. . ....+..++++.+.+|+++|||+..... .
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~-~-~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP-K-PGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST-B-TTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc-c-cCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 556666665 33334445555555 987 8999864444333 1 1245677777776799999999554332 1
Q ss_pred cceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe-CCCCCC
Q 008189 142 RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRS-RDFMKW 220 (574)
Q Consensus 142 ~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S-~Dl~~W 220 (574)
.......+|.|+| ++|.... .|...+........+.+- +-. .+|.+++..-........+.++.| +.++.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1222248999976 8999742 232221111122234433 223 478777663222222344555555 557899
Q ss_pred EEcccccccCCCCCccccceeEEec
Q 008189 221 TKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 221 ~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
+.... .. .....-.|.++++.
T Consensus 148 ~~~~~-~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 148 SSGSP-IP---DGQGECEPSIVELP 168 (275)
T ss_dssp EEEEE-CE---CSEEEEEEEEEEET
T ss_pred ecccc-cc---ccCCcceeEEEECC
Confidence 87643 21 11122236677776
|
... |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.046 Score=55.95 Aligned_cols=140 Identities=13% Similarity=0.205 Sum_probs=79.2
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCCCccEEEEeecCCc---CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEee
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVWGNIVWAHSVSKDL---INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTG 136 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl---v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 136 (574)
-++|+ +++|+|+||+. +...+||+|. ..|....+.+.........+...-.+ +.+|+++|||+.+
T Consensus 82 qVfyf~pk~kwYL~Yq~~---------~~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLff~~ 151 (303)
T cd08987 82 QVFYFAPQNKWYLIYQWW---------PAAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLFFSD 151 (303)
T ss_pred EEeeeccCCEEEEEEecC---------ceEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEEEec
Confidence 46655 59999999973 2568999996 47876544433222112234455555 5568999999987
Q ss_pred ecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC--eEEEEEeeecCCeeE-EEEEE
Q 008189 137 VDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG--HWRMLVGSRRKHRGM-AYLYR 213 (574)
Q Consensus 137 ~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g--~~~M~~g~~~~~~G~-i~ly~ 213 (574)
-+. .+..|....+ .|-....+++.....+-...-|.-|.| ++ .+| +|+|++-+.....++ ..-++
T Consensus 152 dnG----~iyra~~~~~------nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYfrs~T 219 (303)
T cd08987 152 DNG----KLYRSSTTLG------NFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYFRSWT 219 (303)
T ss_pred CCC----eEEEEecchh------hCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeEEEEE
Confidence 542 4444543321 122211233332111111255778885 55 455 999999876521121 12366
Q ss_pred eCCCC-CCEEc
Q 008189 214 SRDFM-KWTKA 223 (574)
Q Consensus 214 S~Dl~-~W~~~ 223 (574)
|+.|. .|+..
T Consensus 220 s~Sl~GpWt~~ 230 (303)
T cd08987 220 ATSLDGPWTPL 230 (303)
T ss_pred cCCCCCCceec
Confidence 77764 78865
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.11 Score=54.19 Aligned_cols=127 Identities=15% Similarity=0.178 Sum_probs=76.6
Q ss_pred eeEEEcCCCeeEEEEeeecCC---CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEE
Q 008189 120 GSATVLPGNKPIILYTGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWR 196 (574)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~ 196 (574)
++.++-.+|+++|||--+... +...-+.|+|+| |++|+.. .++|.+...++....--..++.. ++.++
T Consensus 12 PnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--~~aL~P~~~~d~~g~~SGs~~~~--~~~~~ 82 (308)
T PF00251_consen 12 PNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKD-----LVHWEHL--PVALPPDEEYDADGCFSGSAVVD--DDNLV 82 (308)
T ss_dssp EEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESS-----SSSEEEE--EEEE-SSSGGGTTEEEEEEEEEE--TTCEE
T ss_pred CccCeEeCCEEEEEeccCCCCcccceeEEEEEECCC-----CCCceeC--CceEcccccCCcCccCcceEEEE--CCEEE
Confidence 333344699999999766431 345668999999 4899986 36665543322222223333333 44788
Q ss_pred EEEeeecC-CeeEEEEEEe-CCCCCCEEcc--cccccC---CCCCccccceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 197 MLVGSRRK-HRGMAYLYRS-RDFMKWTKAK--HPIHSL---ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 197 M~~g~~~~-~~G~i~ly~S-~Dl~~W~~~~--~~l~~~---~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
|++.+... ......++.| +|+.+|+... .++... .....|-=|.+|...+ + +|+|++..
T Consensus 83 ~~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~~-~-------------~~~m~~g~ 148 (308)
T PF00251_consen 83 LFYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRED-G-------------RWYMLLGA 148 (308)
T ss_dssp EEEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEECT-T-------------EEEEEEEE
T ss_pred EEEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEecC-C-------------EEEEEEec
Confidence 88776543 2445667777 8899999854 455432 2234577788865542 3 88887764
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=94.87 E-value=6 Score=41.54 Aligned_cols=168 Identities=14% Similarity=0.119 Sum_probs=92.9
Q ss_pred eEEECCEEEEEEeeCCCC-CCCC-ccEEEEeecCCc-CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 63 PMYYKGIYHLFYQYNPKG-AVWG-NIVWAHSVSKDL-INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 63 ~~~~~G~yHlfyq~~P~~-~~~g-~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
++...+..-.|+-....+ ...+ .+....+.|+|. .+|.... ++..... ....++.++.+.+.+|+++|||.....
T Consensus 21 l~~~~~~lla~~e~r~~~~~D~~~~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~ 98 (351)
T cd00260 21 LVCTPGTLLAFADARYGGCSDRSNAIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPN 98 (351)
T ss_pred EEEECCEEEEEEEEEEcCCCCCCcccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCC
Confidence 444445555555433222 2334 567888888885 8999853 3333322 234577888887644899999977643
Q ss_pred C----------CcceEEEEEecCCCCcccceeeccCCCceEecC--CCCCCcCccCC--eeEEecCCCeEEEEEeeecCC
Q 008189 140 K----------ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG--PDVNASAFRDP--TTAWWSNDGHWRMLVGSRRKH 205 (574)
Q Consensus 140 ~----------~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~--~~~~~~~fRDP--~Vvw~~~~g~~~M~~g~~~~~ 205 (574)
. ......+..|.|.| ++|.+. ..+.... ..+ ...++-| -+. . .+|.++|.+-.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~-l-~~Grlv~p~~~~~~~ 169 (351)
T cd00260 99 GEGEDNDYAGPSNAYLVLVYSDDDG----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ-M-KDGRLVFPVYGGNAG 169 (351)
T ss_pred cccccccccCCCceEEEEEEEEcCC----ceecCC--ccCCccccCcce-eEEEecCcCeEE-e-cCCcEEEEEEEEcCC
Confidence 1 23456788998875 899863 2222211 111 1122333 222 2 468877665444322
Q ss_pred --eeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEec
Q 008189 206 --RGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 206 --~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.-...+|..+++++|+.. .... ....+.| |.++++.
T Consensus 170 ~~~~~~~~~S~D~G~tW~~~-~~~~--~~~~~~e-~~i~el~ 207 (351)
T cd00260 170 GRVSSAIIYSDDSGKTWKLG-EGVN--DAGGCSE-CSVVELS 207 (351)
T ss_pred CCEEEEEEEECCCCCCcEEC-CCCC--CCCCCcC-CEEEEec
Confidence 223445555667999864 3221 1133455 7799996
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.3 Score=50.61 Aligned_cols=79 Identities=11% Similarity=0.135 Sum_probs=46.6
Q ss_pred CeEeeeEEEcCCCeeEEEEeeecCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCe
Q 008189 116 GCWSGSATVLPGNKPIILYTGVDHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGH 194 (574)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~ 194 (574)
++.-|..+...+|++||+|++.... ..-.+.+|+|++.- -.|++...+||+..+.+. ...--...+ +...+|.
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~----GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~ 232 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPL----GPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGN 232 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCC----CCCCcCCCCccccCCCCe-EecCCcccE-EECCCCC
Confidence 3556666666799999999864322 22246788887764 456665568887543220 011122233 3446788
Q ss_pred EEEEEe
Q 008189 195 WRMLVG 200 (574)
Q Consensus 195 ~~M~~g 200 (574)
|++++=
T Consensus 233 ~~~~yh 238 (295)
T cd08982 233 YWHVGT 238 (295)
T ss_pred EEEEEE
Confidence 887753
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.66 E-value=1.5 Score=48.52 Aligned_cols=141 Identities=13% Similarity=0.123 Sum_probs=74.5
Q ss_pred eeEEECCEEEEEEeeCCCCC-CCCccEEEEeecCC-cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGA-VWGNIVWAHSVSKD-LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~-~~g~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.++|+||+|+|+|---+... .+.+++--..+.++ .=.|.+. +-+. . ...+.+|...|+||+.+|+|-+++.
T Consensus 95 dl~y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~G~WsDp-i~l~-~-----~~~iDPslf~D~dGr~wlv~~~w~~ 167 (549)
T COG3507 95 DLSYHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESIDGPWSDP-IKLN-G-----SNAIDPSLFFDKDGRKWLVNGSWDG 167 (549)
T ss_pred ceecCCCcEEEEEecccccCCcccccccEEEEecCCCCCcccc-eecC-C-----cCccCCceeecCCCCEEEEecccCC
Confidence 67889999999995443322 23344433344333 2367652 2221 1 1256788988999999999998874
Q ss_pred CC--cceEEEEEecCCCCcccceeeccCCC--ceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCee-EEEEEE
Q 008189 140 KE--RQVQNYAVPANPSDPYLRKWIKPDNN--PVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRG-MAYLYR 213 (574)
Q Consensus 140 ~~--~~~q~lA~s~D~~d~~l~~w~k~~~~--Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G-~i~ly~ 213 (574)
.. ...-.+-.+... .+=.|..+. .++-. +.+...-.-|. +++ ++|.|||+++.+. ...| .+.++|
T Consensus 168 ~~~~~~~~~i~l~~~~-----~~~~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~t~~gh~~~vaR 238 (549)
T COG3507 168 GIFMHSFAGIILQEYD-----KTTQKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGLTTYGHAIRVAR 238 (549)
T ss_pred Ccccccccceeeeecc-----ccccccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCCCccceeEEEEe
Confidence 21 111111121111 011122111 11211 11112334675 555 7888998877543 3233 578999
Q ss_pred eCCCC
Q 008189 214 SRDFM 218 (574)
Q Consensus 214 S~Dl~ 218 (574)
|+.+.
T Consensus 239 SKsid 243 (549)
T COG3507 239 SKSID 243 (549)
T ss_pred ccCCC
Confidence 98764
|
|
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.93 Score=47.38 Aligned_cols=140 Identities=19% Similarity=0.353 Sum_probs=69.6
Q ss_pred eEEECCEEEEEE-eeCCCCCCCCccEEE--EeecCCc-CCceecccccCCC-CCccCCCeE--eeeEEEcCCCeeEEEEe
Q 008189 63 PMYYKGIYHLFY-QYNPKGAVWGNIVWA--HSVSKDL-INWEALEPALYPS-KPFDINGCW--SGSATVLPGNKPIILYT 135 (574)
Q Consensus 63 ~~~~~G~yHlfy-q~~P~~~~~g~~~Wg--ha~S~Dl-v~W~~~~~al~P~-~~~D~~gv~--SGsav~~~dg~~~l~YT 135 (574)
.+..++..+|+- .|+... +...|+ ++.|+|- +.|.+........ +... ..+ -||-|+.+||++++=-.
T Consensus 65 tvvkgn~IymLvG~y~~~~---~~~~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTLVFPv~ 139 (310)
T PF13859_consen 65 TVVKGNKIYMLVGSYSRSA---GADDWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTLVFPVQ 139 (310)
T ss_dssp EEEETTEEEEEEEEESS-----SSTTEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-EEEEEE
T ss_pred eeecceeEEEEEEEEeccc---cccccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCEEEEEe
Confidence 344567777776 344221 222343 5566664 6898753221111 1111 111 14445557999877666
Q ss_pred eecCCCc-ceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe
Q 008189 136 GVDHKER-QVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRS 214 (574)
Q Consensus 136 g~~~~~~-~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S 214 (574)
+...... ....|.+|+|.+ .+|+-..+ ......+||.|+-. ++|+-.|+..... |+-.+|+|
T Consensus 140 a~~~~~~~~~SlIiYS~d~g----~~W~lskg---------~s~~gC~~psv~EW-e~gkLlM~~~c~~---g~rrVYeS 202 (310)
T PF13859_consen 140 ATKKNGDGTVSLIIYSTDDG----KTWKLSKG---------MSPAGCSDPSVVEW-EDGKLLMMTACDD---GRRRVYES 202 (310)
T ss_dssp EEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE-TT---S---EEEE
T ss_pred eeccCccceEEEEEEECCCc----cceEeccc---------cCCCCcceEEEEec-cCCeeEEEEeccc---ceEEEEEE
Confidence 6655544 367789999865 78975321 11246789998744 5789888866532 45578999
Q ss_pred CCC-CCCEEcc
Q 008189 215 RDF-MKWTKAK 224 (574)
Q Consensus 215 ~Dl-~~W~~~~ 224 (574)
.|. ..|+..-
T Consensus 203 ~DmG~tWtea~ 213 (310)
T PF13859_consen 203 GDMGTTWTEAL 213 (310)
T ss_dssp SSTTSS-EE-T
T ss_pred cccceehhhcc
Confidence 885 7899743
|
|
| >COG3940 Predicted beta-xylosidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.43 E-value=5.8 Score=38.76 Aligned_cols=104 Identities=21% Similarity=0.330 Sum_probs=62.3
Q ss_pred eEEECC-EEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccC-CCCCccCCCeE--eeeEEEcCCCeeEEEEeeec
Q 008189 63 PMYYKG-IYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALY-PSKPFDINGCW--SGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 63 ~~~~~G-~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~-P~~~~D~~gv~--SGsav~~~dg~~~l~YTg~~ 138 (574)
.++++| .|+++-|..|.-. |+..+..|.-.+-.+-+-.|+-|. |.-+|+..|.| -|-||+.++|+..+-|++..
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--gnsniyiaemenpwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysasa 214 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--GNSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSASA 214 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--CCcceEEEeccCCceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEeccc
Confidence 345666 6888888887644 555666666555433333344443 44466667765 58888878999999998754
Q ss_pred CCCcceEEEEEe---cCCCCcccceeeccCCCceEe
Q 008189 139 HKERQVQNYAVP---ANPSDPYLRKWIKPDNNPVVF 171 (574)
Q Consensus 139 ~~~~~~q~lA~s---~D~~d~~l~~w~k~~~~Pvi~ 171 (574)
.+-.-..++-+. .|.-|+ .+|+|. ..||+.
T Consensus 215 td~nycmgllwanen~dlldp--aswtks-ptpvf~ 247 (324)
T COG3940 215 TDVNYCMGLLWANENSDLLDP--ASWTKS-PTPVFK 247 (324)
T ss_pred cccceeeeeeeecccCCcCCc--hhcccC-CCccee
Confidence 321112233222 233344 589997 478884
|
|
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=83.45 E-value=33 Score=37.38 Aligned_cols=128 Identities=11% Similarity=0.094 Sum_probs=81.3
Q ss_pred CCEEEEEEeeCCCCC-CC-----CccEEEEeecCC----cCCceecccccCCCCCccC-------CCeEeeeEEEc-CCC
Q 008189 67 KGIYHLFYQYNPKGA-VW-----GNIVWAHSVSKD----LINWEALEPALYPSKPFDI-------NGCWSGSATVL-PGN 128 (574)
Q Consensus 67 ~G~yHlfyq~~P~~~-~~-----g~~~Wgha~S~D----lv~W~~~~~al~P~~~~D~-------~gv~SGsav~~-~dg 128 (574)
+|+..|||-....+. .. -...-|++.+.| +-.|+.+-+.+.||+.+-+ ...-.+.++++ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 699999999743211 11 123456777777 5578877788888875322 24557888887 589
Q ss_pred eeEEEEeeecCC--------------------------------CcceEEEEEecCCCCcccceeeccCCCceEecCCCC
Q 008189 129 KPIILYTGVDHK--------------------------------ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDV 176 (574)
Q Consensus 129 ~~~l~YTg~~~~--------------------------------~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~ 176 (574)
+-||+|.|+... ....++||...+.. +..|+-+ .|+|....
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~~-- 295 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSANG-- 295 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEETT--
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceeccc--
Confidence 999999987531 02246788887642 3578876 59996532
Q ss_pred CCcCccCCeeEEecCCCeEEEEEeeec
Q 008189 177 NASAFRDPTTAWWSNDGHWRMLVGSRR 203 (574)
Q Consensus 177 ~~~~fRDP~Vvw~~~~g~~~M~~g~~~ 203 (574)
-.....=|.||.. +|+||++..++.
T Consensus 296 v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 296 VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1234456887654 899999998875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.15 E-value=14 Score=40.83 Aligned_cols=113 Identities=15% Similarity=0.149 Sum_probs=65.8
Q ss_pred cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC---CcceEEEEEecCCCCcccceeeccCCCceEec
Q 008189 96 LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP 172 (574)
Q Consensus 96 lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~ 172 (574)
.-++.+....+.|...|=. |- +. .+|.|+|||.-+... +...=+.|+|+| |++|+.++ |-|.|
T Consensus 45 ~n~~~Rp~~HFqP~k~wMN-----~P-~~-ykG~yHLFyQyNP~gavwg~ivWGHavSkD-----LinW~~lp--~Ai~P 110 (571)
T KOG0228|consen 45 VNQPDRPGFHFQPPKGWMN-----DP-MY-YKGKYHLFYQYNPKGAVWGNIVWGHAVSKD-----LINWEALP--PAIAP 110 (571)
T ss_pred ccccCCceeecCCCccccc-----Cc-cc-cCcEEEEEEecCCCCceeeeeEeeeecchh-----hccccccC--cccCC
Confidence 3455555555666543321 22 33 589999999866442 334456899988 59999863 56644
Q ss_pred CCCCC-CcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe-CC-----CCCCEEcc
Q 008189 173 GPDVN-ASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRS-RD-----FMKWTKAK 224 (574)
Q Consensus 173 ~~~~~-~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S-~D-----l~~W~~~~ 224 (574)
....+ ...|---.++ . .+|.=.|+..+......+|..|.- .| |+.|...+
T Consensus 111 s~~~ding~wSGSati-~-~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~ 167 (571)
T KOG0228|consen 111 SEWFDINGCWSGSATI-D-PNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDG 167 (571)
T ss_pred CCccccCccccceEEE-c-cCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCC
Confidence 33111 2344444433 3 577777777665544457777762 22 56787654
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.40 E-value=19 Score=40.03 Aligned_cols=96 Identities=17% Similarity=0.168 Sum_probs=58.1
Q ss_pred CCCeeEEEEeeecC---CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCC-cCccCCeeEEecCCCeEEEEEee
Q 008189 126 PGNKPIILYTGVDH---KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNA-SAFRDPTTAWWSNDGHWRMLVGS 201 (574)
Q Consensus 126 ~dg~~~l~YTg~~~---~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~-~~fRDP~Vvw~~~~g~~~M~~g~ 201 (574)
-+|+|++||-=+.. .+...=+.|+|+| |++|+.. .+++.|...++. ..|---.|+ + .++.+.|+-|.
T Consensus 50 ~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--piaL~Pd~~~d~~g~ySGSAV~-~-~~~l~lfytg~ 120 (486)
T COG1621 50 FDGKYHLFYQYNPFGAAHGPKHWGHAVSKD-----LVHWEHL--PIALAPDDDYDSHGCYSGSAVV-D-DGNLSLFYTGN 120 (486)
T ss_pred ECCEEEEEEecCCCCCCCCCceeeeeccCC-----cccceEC--CceecCCCccccCCceeeeEEE-e-CCcEEEEEccc
Confidence 48899999975542 1333446799987 5999974 245554443332 333444444 3 46778887776
Q ss_pred ecC---Cee-EEEEEEeCCCCCCEE-cccccccC
Q 008189 202 RRK---HRG-MAYLYRSRDFMKWTK-AKHPIHSL 230 (574)
Q Consensus 202 ~~~---~~G-~i~ly~S~Dl~~W~~-~~~~l~~~ 230 (574)
..+ .+. .=.++.|+|..++++ .+.++...
T Consensus 121 v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~ 154 (486)
T COG1621 121 VRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQ 154 (486)
T ss_pred eeccCCcceeEEEEEEEcCCCceEeccCCceecC
Confidence 542 222 335788888888887 36565543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 574 | ||||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 1e-180 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 1e-180 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 1e-180 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 1e-179 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 1e-179 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 1e-179 | ||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 1e-161 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 1e-160 | ||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 1e-116 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 4e-36 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 1e-35 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 4e-23 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 5e-22 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 3e-21 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 6e-21 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 7e-21 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 2e-20 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 3e-18 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 3e-08 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 3e-08 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 3e-08 |
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 718 bits (1855), Expect = 0.0
Identities = 269/535 (50%), Positives = 376/535 (70%), Gaps = 12/535 (2%)
Query: 42 KVKQLHRTAFHFQPPKHWI---NGPMYYKGIYHLFYQYNPKGAVWGN-IVWAHSVSKDLI 97
+++Q +RT +HFQPP +W+ NGPM Y+G+YH FYQYNP A +G+ I+W H+VS DL+
Sbjct: 2 QIEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLV 61
Query: 98 NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPY 157
NW L+PA+YP++ D CWSGSAT+LPGN P +LYTG D K RQVQ+ A P N SDP+
Sbjct: 62 NWIHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPF 121
Query: 158 LRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDF 217
LR+W+K NP++ P V FRDP+TAW DG WR++VG R + GMA+LY+S DF
Sbjct: 122 LREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDF 181
Query: 218 MKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYY 277
+ W + P+ S TG WECPDFYPV ++ NGLDTS GG+ + V+K + +D+Y
Sbjct: 182 VNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFE--GHDWY 239
Query: 278 TIGTYNRDKDRYVPDKDS--VDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDST 335
TIGTY+ D++ ++P LRYDYG FYASK+FFD KNRR+LW W E+DS
Sbjct: 240 TIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQ 299
Query: 336 FDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKG 395
DD+ KGWAG+Q+ PR +W+D +GKQL+QWP+EE+E LR V++ N+ LK G +E+ G
Sbjct: 300 ADDIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHG 359
Query: 396 VTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNL 455
+ A+QADV ++FKL L +AE D + +D + LC + G+ +G +GPFGLL +ASK+L
Sbjct: 360 IAASQADVTISFKLEGLKEAEVLDTTL--VDPQALCNERGASSRGALGPFGLLAMASKDL 417
Query: 456 EEFTPVFFRIFKDG-HKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLI 514
+E + +FFR+F++ ++ VLMCSD S ST+ + S+ FV++D +++SLR+LI
Sbjct: 418 KEQSAIFFRVFQNQLGRYSVLMCSDLSRSTV-RSNIDTTSYGAFVDIDPRSEEISLRNLI 476
Query: 515 DHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569
DHS++ESFGAGGKTCITSR+YP ++AHL+ FNNGT+ V + +++AWSMK
Sbjct: 477 DHSIIESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNA 531
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 705 bits (1822), Expect = 0.0
Identities = 318/546 (58%), Positives = 400/546 (73%), Gaps = 17/546 (3%)
Query: 40 AVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL 96
+ V Q +RT FHFQPPK+W+N GPM YKGIYHLFYQ+NPKGAVWGNIVWAHS S DL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 97 INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDP 156
INW+ PA++PS PFDINGCWSGSAT+LP KP+ILYTG+D K +QVQN A P N SDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 157 YLRKWIKPDNNPVVFP--GPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRS 214
YLR+W K NP++ P +NAS+FRDPTTAW D WR+++GS+ RG+A Y S
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 215 RDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAG---GNEKFVLKVSLDL 271
+DF+KW K+ P+H +GMWECPDF+PV+ G NG++TS G K VLK+SLD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 272 TRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANE 331
T++DYYTIGTY+R KD++VPD RYDYG +YASKTFFDS KNRRILWGW NE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 332 SDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNV-HISNQELKKGHH 390
S S DD+ KGW+G+QTIPR++WLD SGKQL+QWP+ E+E LR K V ++ N+ LK G
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 360
Query: 391 VEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTL 450
+EV GVTAAQADVEV FK+ L+KA+ +PSW D + +C K+ V+ G+GPFGL+ L
Sbjct: 361 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSW--TDPQLICSKMNVSVKSGLGPFGLMVL 418
Query: 451 ASKNLEEFTPVFFRIFKD---GHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKK 507
ASKNLEE+T V+FRIFK +K++VLMCSD S S+L E K ++ FV+++ +
Sbjct: 419 ASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSL-KEDNDKTTYGAFVDIN-PHQP 476
Query: 508 LSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMK 567
LSLR+LIDHSVVESFG G+ CITSRVYP LA+ +HL+AFN G ++V V LNAWSM
Sbjct: 477 LSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMN 536
Query: 568 KPVKMN 573
+++
Sbjct: 537 SA-QIS 541
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 689 bits (1780), Expect = 0.0
Identities = 221/535 (41%), Positives = 317/535 (59%), Gaps = 11/535 (2%)
Query: 40 AVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL 96
+ RTAFHFQP + W++ GP++YKG YH FYQYNP VWGN W H+VS+DL
Sbjct: 11 SNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDL 70
Query: 97 INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDP 156
I+W L AL + +D+ G +SGSAT LP + ++LYTGV + ++ + A PA+ SDP
Sbjct: 71 IHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDP 130
Query: 157 YLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRD 216
L +W+K NP++ P V+ + FRD +T W+ ++G WR+ +G++ G+A +Y ++D
Sbjct: 131 LLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETKD 190
Query: 217 FMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDY 276
F + + +H++ +TG+WEC D YPVS +G+ GL+TS G K VLK S+D + DY
Sbjct: 191 FKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDY 250
Query: 277 YTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTF 336
Y IGTY+ +++ PD D GLRYD+G +YASKTF+D +K RR++W W E DS
Sbjct: 251 YAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEV 310
Query: 337 DDMAKGWAGVQTIPREVWLD-GSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKG 395
D KGWA VQTIPR V LD +G +L WP+EE+E+LR + S + G V +
Sbjct: 311 ADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDV 370
Query: 396 VTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNL 455
TA Q D+ F++ E + + + + G+ +G +GPFGLL A++NL
Sbjct: 371 GTATQLDIIAEFEID----KEALEGTIEADMGYNCTTSGGAAERGVLGPFGLLVSATENL 426
Query: 456 EEFTPVFFRIFKDGH-KHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLI 514
E TPV+F I K C D S S+ ++ + K V V L +K ++R L+
Sbjct: 427 SEQTPVYFYIAKGTDGNFKTFFCLDESRSSKASD-VSKQVKGFTVPV-LDGEKFTMRLLV 484
Query: 515 DHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569
DHS+VESF GG++CITSRVYPT A++ A L+ FNN T L W M
Sbjct: 485 DHSIVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSA 539
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 573 bits (1478), Expect = 0.0
Identities = 119/558 (21%), Positives = 190/558 (34%), Gaps = 79/558 (14%)
Query: 43 VKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINW 99
Q +R +HF P K+W+N G +Y+ G YHLF+QYNP G WGNI W H++S+DL +W
Sbjct: 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHW 62
Query: 100 EALEPALYPSKPFD--INGCWSGSATVLPGNKP----------IILYTGV---------- 137
E AL +SGSA N + +YT
Sbjct: 63 EEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSG 122
Query: 138 --DHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP---GPDVNASAFRDPTTAWWSND 192
+++Q Q+ A D L NPV+ + FRDP W
Sbjct: 123 QTVQEDQQSQSIAY---SLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDES 179
Query: 193 GHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGL 252
W ++ +Y S + W A G+WECP + + N
Sbjct: 180 QKWVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNST 237
Query: 253 DTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYG-NFYA 311
G + + Y +G ++ D D+G +FYA
Sbjct: 238 KWVITSGLNPGGPPGT--VGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDFYA 295
Query: 312 SKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQ--LLQWPIEE 369
+ + N + GW N + W IPR + L G + L+Q P E
Sbjct: 296 AAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEA 355
Query: 370 LETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEH 429
++ K S T V+++F
Sbjct: 356 WSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSAK------------------- 396
Query: 430 LCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEG 489
F + AS N E T V + K + + L + + + +
Sbjct: 397 ----------SKASTFAIALRASANFTEQTLVGYDFAK---QQIFLDRTHSGDVSF--DE 441
Query: 490 LYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAF 549
+ + G + D S + L +D S VE FG G+T +T++++P+ D H
Sbjct: 442 TFASVYHGPLTPD-STGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSS---DAVHARLA 497
Query: 550 NNGTETVTVEKLNAWSMK 567
+ G T + + + +
Sbjct: 498 STG-GTTEDVRADIYKIA 514
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 526 bits (1356), Expect = 0.0
Identities = 124/551 (22%), Positives = 201/551 (36%), Gaps = 80/551 (14%)
Query: 34 EFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAH 90
+ A K +H WIN G +YKG +H+FYQ +P G WG + W H
Sbjct: 26 AGVAEMAAKRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGH 85
Query: 91 SVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV--------DHKER 142
S D++NW+ PS + +G +SGSA + YTG +
Sbjct: 86 VSSTDMLNWKREPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDW 145
Query: 143 QVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202
QVQ A+P N ++ D +RDP W M G
Sbjct: 146 QVQMTALPDND-----ELTSATKQGMIIDCPTDKVDHHYRDPKVWKT--GDTWYMTFGVS 198
Query: 203 RKH-RGMAYLYRSRDFMKWTKAKHP-IHSLANTGMWECPDFYPVSISGKNG---LDTSFA 257
RG +L+ S+D ++W + H + M ECPDF P+ N + S
Sbjct: 199 SADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAM 258
Query: 258 GGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYG-NFYASKTFF 316
G + ++ Y IGT+ + P+ + +D G N+YA ++F
Sbjct: 259 GSKPSGFMNRNVSNA---GYMIGTWEPGG-EFKPETE------FRLWDCGHNYYAPQSFN 308
Query: 317 DSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGK 376
R+I++GW + GW G T+PRE+ L G ++ P+ E+E LR
Sbjct: 309 V--DGRQIVYGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDGD-VVTAPVAEMEGLRED 365
Query: 377 NVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGS 436
+ + L ++ A ++E+T L +
Sbjct: 366 TLDHGSVTLDMD-GEQIIADDAEAVEIEMTIDLAA------------------------- 399
Query: 437 KVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFA 496
GL A+++ +T V + DG + D + G A
Sbjct: 400 ---STAERAGLKIHATED-GAYTYVAY----DGQIG--RVVVDRQAM---ANGDRGYRAA 446
Query: 497 GFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETV 556
+ +L+ KL LR +D VE + GG ++S Y + + + ++
Sbjct: 447 PLTDAELASGKLDLRVFVDRGSVEVYVNGGHQVLSSYSYAS----EGPRAIKLVAESGSL 502
Query: 557 TVEKLNAWSMK 567
V+ L MK
Sbjct: 503 KVDSLKLHHMK 513
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 501 bits (1292), Expect = e-174
Identities = 111/569 (19%), Positives = 201/569 (35%), Gaps = 108/569 (18%)
Query: 36 QSLAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSV 92
+L + +R ++HF P ++W+N G + +HLF+Q+NP VWGNI W H+
Sbjct: 17 LTLPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHAT 76
Query: 93 SKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKP----------IILYTG-VDHKE 141
S DL++W A+ + ++G+A P N + +TG +
Sbjct: 77 STDLMHWAHKPTAIADENGVE---AFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQ 133
Query: 142 RQVQNYAVPANPSDPYLRKWIKPDNNPVV-----FPGPDVNASAFRDPTTAWWSNDGHWR 196
Q Q A + W K NP++ P RDP + G+W
Sbjct: 134 TQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWI 189
Query: 197 MLVGSRRKHRGMAYLYRSRDFMKWT-----KAKHPIHSLANTGMWECPDFYPVSISGKNG 251
M++ + + + S D + WT K+ ++ WE PD + + + G
Sbjct: 190 MVLAHGGQDK--LSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGTEE 247
Query: 252 LDTSFAGGNEKFVLKVSL-----DLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDY 306
+V+ ++ G+++ P S + D
Sbjct: 248 ---------TTWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTADPVDAST-----MWLDN 293
Query: 307 G-NFYASKTFFD--SRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWL--DGSGKQ 361
G +F + ++ + + RRI+ N S W G+ + PR + L G+ +
Sbjct: 294 GRDFDGALSWVNVPASDGRRIIAAVMNSYGSNPPT--TTWKGMLSFPRTLSLKKVGTQQH 351
Query: 362 LLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPS 421
+Q PI EL+T+ ++NQ + G + + + DV V F +
Sbjct: 352 FVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVRVAFYPDAGSV------- 403
Query: 422 WKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDAS 481
L K E T + + + D +
Sbjct: 404 -----------------------LSLA--VRKGASEQTVIKYTQSDA------TLSVDRT 432
Query: 482 SSTLKTEGLYKPSFAGFVNVDL---SDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTL 538
S + Y P+ G L +S+R L+D VE FG G+ I+ ++P+
Sbjct: 433 ESG---DISYDPAAGGVHTAKLEEDGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSD 489
Query: 539 AVFDDAHLYAFNNGTETVTVEKLNAWSMK 567
+ D L ++ ++ S+
Sbjct: 490 S-SDGLALEVTGG---NAVLQSVDVRSVS 514
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 478 bits (1233), Expect = e-165
Identities = 106/564 (18%), Positives = 199/564 (35%), Gaps = 91/564 (16%)
Query: 40 AVKVKQLHRTAFHFQPPKHWIN---GPMYYK--GIYHLFYQYNPKGAVWGN-IVWAHSVS 93
+V + +R HF P K W+N G Y K ++HL++QYNP WG + W H+ S
Sbjct: 2 SVDTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 61
Query: 94 KDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVD------------HKE 141
DL++W+ E A+ P D G +SGS V N + +D +
Sbjct: 62 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPD 119
Query: 142 RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGS 201
Q Q+ A + + K +NNPV DV+++ FRDP W + W M+V
Sbjct: 120 NQTQDIAFSLDGG----YTFTKYENNPV----IDVSSNQFRDPKVFWHEDSNQWIMVVSK 171
Query: 202 RRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNE 261
++++ ++ S + W + S +ECP V I +
Sbjct: 172 SQEYK--IQIFGSANLKNWVLNSN-FSSGYYGNQYECPGLIEVPIENSDK---------S 219
Query: 262 KFVLKVSL-----DLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYG-NFYASKTF 315
K+V+ +++ + Y +G + D ++VPD D G +FYA +TF
Sbjct: 220 KWVMFLAINPGSPLGGSINQYFVGDF--DGFQFVPDDSQTR-----FVDIGKDFYAFQTF 272
Query: 316 FDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWL-------DGSGKQLLQWPIE 368
+ ++ + WA+ W ++ R L + L+Q P+
Sbjct: 273 SEV-EHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVL 331
Query: 369 ELETLRGKNVHISNQELKKGHHVEVK-GVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDA 427
+ N +L ++ + D +TFK+ +L+
Sbjct: 332 PDSINVVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVLNLN-------------- 377
Query: 428 EHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKT 487
V G F +L + + + + +
Sbjct: 378 ----------VSPGKTHFDILINSQELNSSVDSIKIGFDSSQSS-FYIDRHI-PNVEFPR 425
Query: 488 EGLYKPSFAG---FVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDA 544
+ + A ++ D + SL ++D +++E + G +T+ + +
Sbjct: 426 KQFFTDKLAAYLEPLDYDQDLRVFSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGKYPHD 485
Query: 545 HLYAFNNGTETVTVEKLNAWSMKK 568
+ +E + + K
Sbjct: 486 IQIVTDTEEPLFELESVIIRELNK 509
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 470 bits (1211), Expect = e-162
Identities = 101/556 (18%), Positives = 178/556 (32%), Gaps = 111/556 (19%)
Query: 50 AFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAL 106
+H PP W+ P+ G Y L+Y ++ + G W H+ + D + + +
Sbjct: 3 VYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQN--NGPGGWDHASTTDGVAFTHHGTVM 60
Query: 107 YPSKPFDINGCWSGSATVLPGNKPIILYTGV----------DHKERQVQNYAVPANP--- 153
F WSGSA V N G ++ Q Q +
Sbjct: 61 PLRPDFP---VWSGSAVVDTANTAG-FGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFT 116
Query: 154 ----SDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMA 209
DP + + D P NA FRDP W + G W ++G A
Sbjct: 117 FTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL----RYA 169
Query: 210 YLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269
Y S + WT ++ + G ECPD + ++ G +VL S+
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRHWVLAASM 219
Query: 270 DLTRYDY-----YTIGTYNRDKDRYVPDKDSVDGWRGLRYDYG-NFYASKTF--FDSRKN 321
D Y GT+ D +++ D + D+G ++YA+ T+ D+ +
Sbjct: 220 DAYGIGLPMTYAYWTGTW--DGEQFHADDLT-----PQWLDWGWDWYAAVTWPSIDAPET 272
Query: 322 RRILWGWANESDSTFDDM----AKGWAGVQTIPREVWLD---GSGKQLLQWPIEELETLR 374
+R+ W N D+ + G+ G +I RE+ L G LL P+ L
Sbjct: 273 KRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYV 332
Query: 375 GKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKI 434
+ ++ + + G ++E+ +
Sbjct: 333 TATTTLPDRTVDGSAVLPWNG---RAYEIELDIAWDTATN-------------------- 369
Query: 435 GSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPS 494
G+ S + T + + D S L P
Sbjct: 370 ----------VGISVGRSPDGTRHTNIGKYG--------ADLYVDRGPSDLAGYS-LAPY 410
Query: 495 FAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTE 554
+D + + LR L+D VE F G T ++ +V+ D + + +G
Sbjct: 411 SRAAAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVHFAE---GDTGISLYTDGG- 466
Query: 555 TVTVEKLNAWSMKKPV 570
+ + + +
Sbjct: 467 PAHFTGIVVREIGQAI 482
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 441 bits (1137), Expect = e-151
Identities = 126/532 (23%), Positives = 211/532 (39%), Gaps = 114/532 (21%)
Query: 46 LHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEAL 102
L + +HF P W+N G +++KG YH+FYQYNP+ WGNI W H+VS DL++W L
Sbjct: 1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHL 60
Query: 103 EPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV-----DHKERQVQNYAVPANPSDPY 157
ALYP + +G +SGSA V K ++YT + E++ Q + N
Sbjct: 61 PVALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN----- 112
Query: 158 LRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH-RGMAYLYRSRD 216
++K D NPV+ P+ AFRDP +G WRM++GS + G LY S D
Sbjct: 113 GLDFVKYDGNPVISKPPEEGTHAFRDPKVNRS--NGEWRMVLGSGKDEKIGRVLLYTSDD 170
Query: 217 FMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDY 276
W + I T +CPD + EK +L S+ T
Sbjct: 171 LFHWKY-EGAIFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVL 214
Query: 277 YTIGTYNRDKDRYVPDKDSVDGWRGLRYDYG-NFYASKTFFDSRKNRRILWGWANE--SD 333
+++G + + +K D+G +FYA++TFF +R ++ GW
Sbjct: 215 FSMGEL--KEGKLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRT 263
Query: 334 STFDDMAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEV 393
+ +GW GV ++PRE++++ +L P++EL LR + V + + +
Sbjct: 264 GLYPTKREGWNGVMSLPRELYVE--NNELKVKPVDELLALRKRKVFETAKS-----GTFL 316
Query: 394 KGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASK 453
V ++ F G + L
Sbjct: 317 LDVKENSYEIVCEFS-------------------------------------GEIELRMG 339
Query: 454 NLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSL 513
N E + L++ D + S + + K + + +R+
Sbjct: 340 NESEEV-----VITKSRDELIV---DTTRSGVSGGEVRKSTV-------EDEATNRIRAF 384
Query: 514 IDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKL-NAW 564
+D VE F + R++P + ++ + + + V +L N W
Sbjct: 385 LDSCSVEFFFNDS-IAFSFRIHPE----NVYNILSVKSNQVKLEVFELENIW 431
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 403 bits (1035), Expect = e-133
Identities = 91/641 (14%), Positives = 178/641 (27%), Gaps = 141/641 (21%)
Query: 35 FQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMY--YKGIYHLFYQYNPKGAVWGNIVWA 89
+L + L R H P + I G++H+ + ++ G A
Sbjct: 14 LSTLPNNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG-------IA 66
Query: 90 HSVSKDLINWEAL----EPALYPSKPFDINGCWSGSAT-VLPGNKPIILYTGVDH----- 139
+ + +L + + P D + G+ V N P +LYT V
Sbjct: 67 GATTANLATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHW 126
Query: 140 -----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVF-PGPDVNASAFRDPTTAWWSN-- 191
+ + Q+ AV + R++ K D PV+ V+ +AFR P +
Sbjct: 127 SIPYTRGSETQSLAV----ARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLD 182
Query: 192 --------------------------DGHWRMLVGSR-RKHRGMAYLYR-----SRDFMK 219
+ W + V +LYR + +F
Sbjct: 183 VLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQY 242
Query: 220 WTKAKHPIHSLANTG-------------MWECPDFYPVSISGKNGLDTS----FAGGNEK 262
W N+ +E + ++ G +
Sbjct: 243 WEYLGEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEGSG 302
Query: 263 FVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFD----- 317
+ + + G ++ + G + YA+
Sbjct: 303 LPIVPQVSSIHDMLWAAGEVGVGSEQEGAKVEFSPSMAGFLDWGFSAYAAAGKVLPASSA 362
Query: 318 ------SRKNRRILWGWANESDSTFDDM----AKGWAGVQTIPREVWL---------DGS 358
+R + + W D +GW G +PRE+ + +
Sbjct: 363 VSKTSGVEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELV 422
Query: 359 GKQLLQWPIEE-------LETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPS 411
++ + W + E L TL + L V + Q V F
Sbjct: 423 REEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTAAVVPFAQSP 482
Query: 412 LDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHK 471
K + + + G LAS+ E T +++
Sbjct: 483 SSKFFVLTAQLE----------FPASARSSPLQSGFEILASE--LERTAIYY----QFSN 526
Query: 472 HLVLMCSDASSSTL--------KTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFG 523
+++ +S+ TE F N + L L ++D++VVE +
Sbjct: 527 ESLVVDRSQTSAAAPTNPGLDSFTESGKLRLFDVIENGQEQVETLDLTVVVDNAVVEVY- 585
Query: 524 AGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAW 564
A G+ +++ + + F+NG V ++
Sbjct: 586 ANGRFALSTWARSWYD--NSTQIRFFHNGEGEVQFRNVSVS 624
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 65.2 bits (158), Expect = 2e-11
Identities = 44/307 (14%), Positives = 87/307 (28%), Gaps = 54/307 (17%)
Query: 61 NGPMYYKGIYHLFYQY-------------NPKGAVWGNIVWAHSVSKDLINWEALEPALY 107
+ + Y+++Y K W ++ SKD + W+ A+
Sbjct: 94 SAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGLTWKEQGIAVK 153
Query: 108 PSKP--FDINGCWSGSATVLPGNKPIILYTGVDH----KERQVQNYAVPANPSDPYLRKW 161
+ +D ++ G K + Y V + + A +P +
Sbjct: 154 RGEKGAYDDRSVFTPEVMEWKG-KYYLCYQAVKSPYTVRVKNTIGMACADSPEGLW---- 208
Query: 162 IKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVG--SRRKHRGMAYLYRSRDFMK 219
+ PV+ P D S V + G Y+Y + M
Sbjct: 209 -TKTDKPVLEPSDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCIIPYNGKFYMYYKGERMG 267
Query: 220 WTKA---KHPIHSLAN----TGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT 272
+ H +A G + ++ P+S SG + GG
Sbjct: 268 EEITWGGREIKHGVAIAENPMGPYVKSEYNPISNSGHEVCVWPYKGGI------------ 315
Query: 273 RYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYAS----KTFFDSRKNRRILWGW 328
I T +K+ D ++ + + G +A + + WG
Sbjct: 316 ---ASLITTDGPEKNTLQWSPDGIN-FEIMSVVKGAPHAIGLNRSADAEKEPTEILRWGL 371
Query: 329 ANESDST 335
+ +S+
Sbjct: 372 THIYNSS 378
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 64.9 bits (157), Expect = 2e-11
Identities = 46/296 (15%), Positives = 85/296 (28%), Gaps = 40/296 (13%)
Query: 56 PKHWINGP---MYYKGIYHLFYQYNP-------------KGAVWGNIVWAHSVSKDLINW 99
P + G Y+++Y + K W ++ S+D W
Sbjct: 91 EGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDGWTW 150
Query: 100 EALEPALYPSKP--FDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPY 157
+ PA+ + +D ++ + +K + Y V V +D
Sbjct: 151 KEEGPAVTRGEKGAYDDRSVFTVEI-MKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSP 209
Query: 158 LRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVG--SRRKHRGMAYLYRSR 215
W K + P++ P + A V ++G YLY
Sbjct: 210 DGPWTKSE-EPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIPYKGKFYLYYKG 268
Query: 216 DFMKWTKA---KHPIHSLAN----TGMWECPDFYPVSISGKNGLDTSFAG---------G 259
+ M + H +A G + + P+S SG + G G
Sbjct: 269 EQMGEAITFGGRQIRHGVAIADNPKGPYVKSPYNPISNSGHEICVWPYNGGIASLITTDG 328
Query: 260 NEKFVLKVSLDLTRYD-YYTIGTYNRDKDRYVPDKDSVDGW-RGLRYDYGNFYASK 313
EK ++ + D ++ I N D LR+ + Y +
Sbjct: 329 PEKNTIQWAPDGINFEIKSVIPGVNAHAIGLNRTADVEKEPTEILRWGLTHIYNNG 384
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 63.7 bits (154), Expect = 4e-11
Identities = 52/333 (15%), Positives = 95/333 (28%), Gaps = 48/333 (14%)
Query: 51 FHFQPPKHWI--NGPMYYKGIYHLFYQY-------------NPKGAVWGNIVWAHSVSKD 95
++ + + YH++Y K W H+ SKD
Sbjct: 42 LAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKD 101
Query: 96 LINWEALEPALYPSKP--FDINGCWSGSATVLPGNKPIILYTGVDH----KERQVQNYAV 149
I W+ + PA+ +D ++ ++Y V + + A
Sbjct: 102 KITWKEIGPAIQRGAAGAYDDRAVFTPEVLRH-NGTYYLVYQTVKAPYLNRSLEHIAIAY 160
Query: 150 PANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR--KHRG 207
+P P+ + P++ P D D V
Sbjct: 161 SDSPFGPW-----TKSDAPILSPENDGVWDTDEDNRFLVKEKGSFDSHKVHDPCLMFFNN 215
Query: 208 MAYLYRSRDFMKWTKA---KHPIHSLAN----TGMWECPDFYPVSISGKNGLDTSFAG-- 258
YLY + M + + H +A G + ++ P++ SG + G
Sbjct: 216 RFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKSEYNPITNSGHEVAVWPYKGGM 275
Query: 259 -------GNEKFVLKVSLDLTRYD-YYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFY 310
G EK + + D +D I + P+ DS D G+ + + Y
Sbjct: 276 ATMLTTDGPEKNTCQWAEDGINFDIMSHIKGAPEAVGFFRPESDSDDPISGIEWGLSHKY 335
Query: 311 ASKTFFDS--RKNRRILWGWANESDSTFDDMAK 341
+ ++ R A T D A
Sbjct: 336 DASWNWNYLCFFKTRRQVLDAGSYQQTGDSGAV 368
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 59.0 bits (142), Expect = 1e-09
Identities = 23/187 (12%), Positives = 46/187 (24%), Gaps = 31/187 (16%)
Query: 62 GPMYYKGIYHLFY---QYNPKGAVWGNIVWAHSVSKDLINWEAL-EPALYPSKPFDINGC 117
Y G + Y + G ++ S D +++ P YP
Sbjct: 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELE 116
Query: 118 WSGSA-----TVLPGNKPIILYTGVDHKERQVQ----------NYAVPANPSDPYLRKWI 162
W G V +++YT + ++ PA + +
Sbjct: 117 WPGGCEDPRIAVTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAFAKAFDGKFFN 176
Query: 163 KPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTK 222
+ + + +G + M + S D + WT
Sbjct: 177 LGCKSGSILTEVVKGKQVIKKV-------NGKYFMYW-----GEEHVFAATSDDLIHWTP 224
Query: 223 AKHPIHS 229
+ S
Sbjct: 225 IVNIDGS 231
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 2e-08
Identities = 33/214 (15%), Positives = 63/214 (29%), Gaps = 32/214 (14%)
Query: 63 PMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSA 122
P + G + NP ++ N + P S ++ N ++ +A
Sbjct: 12 PDWAFGGFERPKNVNP-------VISPIE------NTKFYCPLTKDSIAWESNDTFNPAA 58
Query: 123 TVLPGNKPIILYTGVDH------KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPD- 175
L + ++LY D YA S + + + PV +P D
Sbjct: 59 -TLYNGEIVVLYRAEDKSGVGIGHRTSRLGYAT----ST-DGTHF-QREKTPVFYPDNDS 111
Query: 176 ----VNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLA 231
DP ++DG + M+ +H + SR+ WTK
Sbjct: 112 QKELEWPGGCEDPR-IAVTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAFAKAF 170
Query: 232 NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVL 265
+ + ++ N K+ +
Sbjct: 171 DGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFM 204
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 58.6 bits (141), Expect = 2e-09
Identities = 34/246 (13%), Positives = 68/246 (27%), Gaps = 28/246 (11%)
Query: 62 GPMYYKGIYHLFY---QYNPKGAVWGNIVWAHSVSKDLINWEAL-EPALYPS-----KPF 112
Y G + Y + +G ++ S D I++E +PA YP+ +
Sbjct: 54 AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENE 113
Query: 113 DINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP 172
G + ++LYT + A + L+ W K
Sbjct: 114 CPGGTEDPRIAMTEDGTYVLLYTQWNR------KVPRLAVATSKDLKHWTKFGPAFEKAY 167
Query: 173 GPDVNASAFRDP---------TTAWWSNDGHWRMLVGSRRKH--RGMAYLYRSRDFMKWT 221
A + +G + M G + + + +
Sbjct: 168 NGKFKDEATKSASLVTTLKGDKQVIAKVNGKYFMYWGEKNVYAATSDNLIDWDPLLDENG 227
Query: 222 KAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281
+ + + + P +I K+G+ + G NE + + Y G
Sbjct: 228 ELLKLFSPRSGYFDSQLTECGPPAILTKDGIVLLYNGKNEPGEKGDT--AYPANSYCAGQ 285
Query: 282 YNRDKD 287
D +
Sbjct: 286 ALFDVN 291
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 46.7 bits (110), Expect = 1e-05
Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 20/170 (11%)
Query: 99 WEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQN------YAVPAN 152
+ P S ++ + ++ +A + K +++Y D+ + + + YA
Sbjct: 32 TKFYCPMREDSVAWEESDTFNPAA-TIYDGKIVVMYRAEDNSAQGIGSRTSRLGYAT--- 87
Query: 153 PSDPYLRKWIKPDNNPVVFPGPDVNASAFR-----DPTTAWWSNDGHWRMLVGSRRKHRG 207
S + + D P +P D A DP + DG + +L +
Sbjct: 88 -ST-DGIHF-ERDTKPAFYPAKDNQAENECPGGTEDPR-IAMTEDGTYVLLYTQWNRKVP 143
Query: 208 MAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFA 257
+ S+D WTK P A G ++ S+ D
Sbjct: 144 RLAVATSKDLKHWTK-FGPAFEKAYNGKFKDEATKSASLVTTLKGDKQVI 192
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 4e-07
Identities = 36/205 (17%), Positives = 59/205 (28%), Gaps = 47/205 (22%)
Query: 17 WVISNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWINGPMYYKGIYHLFYQY 76
W + N +G A++ Y +LA PK+ ++FYQ
Sbjct: 62 WPLQNADGTVANYHGYHIVFALAG--------------DPKNA------DDTSIYMFYQK 101
Query: 77 NPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTG 136
+ ++ V KD ++A + L WSGSAT K + YT
Sbjct: 102 VGETSIDSWKNAGR-VFKDSDKFDANDSILKDQ-----TQEWSGSATFTSDGKIRLFYTD 155
Query: 137 VDHKERQVQNYA-----VPANPSDPYLRKWIKP--------------DNNPVVFPGPDVN 177
K Q V A+ S + +
Sbjct: 156 FSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGD 215
Query: 178 ASAFRDPTTAWWSNDGHWRMLVGSR 202
RDP + + GH ++ +
Sbjct: 216 NHTLRDP--HYVEDKGHKYLVFEAN 238
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 50.3 bits (119), Expect = 1e-06
Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 26/161 (16%)
Query: 65 YYKGIYHLFYQYNPKGAVW--GNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSA 122
+ G + +++ D +W+ P P WSGSA
Sbjct: 143 NWNGYQLVIGMMGVPNVNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPVIQQ--WSGSA 200
Query: 123 TVLPGNKPIILYTGVDHKERQ--VQNYAVP----ANPSDPYLRKWIKPDNNPVVF----- 171
T+ + YT VD + Q A D DN+ +VF
Sbjct: 201 TLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGY 260
Query: 172 ----------PGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202
+ A RD ++G+ ++ +
Sbjct: 261 HYQTYDQWKETNKGADNIAMRDAHV-IDDDNGNRYLVFEAS 300
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 3e-06
Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 28/181 (15%)
Query: 65 YYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEAL-EPALYPS---KPFDINGCWSG 120
Y G + ++ + K SKD INWE E + +PF + +
Sbjct: 63 PYNGEFVGVFRIDHKN---TRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDP 119
Query: 121 SATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASA 180
+ I + DH + + + +++ P + + N
Sbjct: 120 RVVKIED-TYYITFCTDDHGPT------IGVGMTK-DFKTFVR---LPNAYVPFNRNGVL 168
Query: 181 FRDPTTAWWSNDGHWRML---VGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWE 237
F +G + ML + G +L S D + W + + ++ WE
Sbjct: 169 F------PRKINGKYVMLNRPSDNGHTPFGDIFLSESPDMIHWGNHR-FVLGRSSYNWWE 221
Query: 238 C 238
Sbjct: 222 N 222
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 22/229 (9%), Positives = 56/229 (24%), Gaps = 15/229 (6%)
Query: 104 PALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIK 163
P + + ++ + V + + ++ R ++ S W
Sbjct: 43 PIIGRNPVPKGARVFNSAV-VPYNGEFVGVFRIDHKNTRPFLHFGR----SK-DGINWEI 96
Query: 164 PDNNPVVFPGPD---VNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKW 220
+ + + + S DP + + + + H + ++DF +
Sbjct: 97 -EPEEIQWVDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDD-HGPTIGVGMTKDFKTF 152
Query: 221 TKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIG 280
+ + N P N + L S D+ + +
Sbjct: 153 VRLPNAYVP-FNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIFLSESPDMIHWGNHRFV 211
Query: 281 TYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWA 329
+ + K G + G + +G A
Sbjct: 212 LGRSSYNWWENLK-IGAGPYPIETSEGWLLIYHGVTLTCNGYVYSFGAA 259
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} Length = 493 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 7e-04
Identities = 33/205 (16%), Positives = 55/205 (26%), Gaps = 38/205 (18%)
Query: 17 WVISNNNGVEASHKIYPEFQSLAAVKVKQLHRTAFHFQPPKHWINGPMYYKGIYHLFYQY 76
W + + + + S+ + L A A + +H FY+
Sbjct: 76 WTLIDKHADQFSYNGWEVIFCLTAD------PNAGYGFDDRHV-------HARIGFFYRR 122
Query: 77 --NPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPII-- 132
P N W + + + +Y + + WSGS+ ++ + +
Sbjct: 123 AGIPASRRPVNGGWTY---GGHLFPDGASAQVYAGQTYTNQAEWSGSSRLMQIHGNTVSV 179
Query: 133 LYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNAS------------- 179
YT V N P I D N V F G +
Sbjct: 180 FYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAHTPLLQPDGVLYQNGA 239
Query: 180 -----AFRDPTTAWWSNDGHWRMLV 199
FRDP T +V
Sbjct: 240 QNEFFNFRDPFTFEDPKHPGVNYMV 264
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 574 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 100.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 100.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 100.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 100.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 100.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 100.0 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 100.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 100.0 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 100.0 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 100.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 99.97 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 99.96 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 99.92 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.92 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.91 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.89 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.88 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.88 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 99.84 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.83 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 99.82 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 99.81 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 99.78 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 99.78 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 99.77 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 99.73 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.63 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.62 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 99.59 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 99.55 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 99.53 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.52 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.52 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 99.49 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 99.48 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.43 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.38 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.34 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 99.2 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 99.18 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.92 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 98.84 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.84 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.84 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 98.59 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 98.55 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 98.44 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 98.28 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 98.27 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 98.26 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 98.15 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.14 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.09 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 98.01 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 98.0 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 98.0 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 97.91 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 97.78 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 97.76 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 97.74 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 97.73 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.7 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 97.69 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 97.63 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 97.32 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 97.26 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 97.22 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 97.05 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 96.88 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 96.86 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 96.74 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 96.66 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.5 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 96.43 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 96.11 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.01 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 95.9 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 95.89 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 95.45 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 95.24 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 93.7 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 93.17 | |
| 4azz_A | 172 | Levanase; hydrolase; 1.70A {Bacillus subtilis} | 91.73 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 92.47 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 92.32 | |
| 4b1m_A | 185 | Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacil | 91.67 | |
| 3sil_A | 379 | Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 | 91.55 | |
| 2sli_A | 679 | Intramolecular trans-sialidase; hydrolase, neurami | 91.51 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 91.29 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 90.89 | |
| 1ms9_A | 648 | Trans-sialidase; trans-glycosylation, protein-acrb | 90.41 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 88.35 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 87.32 | |
| 2jkb_A | 686 | Sialidase B; intramolecular trans-sialidase, lyase | 87.29 | |
| 2w20_A | 471 | Sialidase A; secreted, cell WALL, hydrolase, glyco | 86.75 | |
| 1w0p_A | 781 | Sialidase; hydrolase, neuraminidase, lectin; HET: | 84.78 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 84.56 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 82.35 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-114 Score=948.98 Aligned_cols=519 Identities=43% Similarity=0.815 Sum_probs=446.8
Q ss_pred cCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEee
Q 008189 44 KQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSG 120 (574)
Q Consensus 44 ~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SG 120 (574)
.+.+||+|||+|+.|||| |++|++|+|||||||+|+++.||+++||||+|+|||||+++|+||.|+..||.+|||||
T Consensus 15 ~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DLvhW~~~p~AL~P~~~~D~~G~~SG 94 (546)
T 3ugf_A 15 LSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPLALAADQWYDMQGVFSG 94 (546)
T ss_dssp HHHTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSSSSCEECCCCBCSCSGGGTTCEEEE
T ss_pred hhhcCCeEEEeCCCCCccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCcCccccCCCCCCCCcccccCCcCcc
Confidence 356799999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEe
Q 008189 121 SATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVG 200 (574)
Q Consensus 121 sav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g 200 (574)
||+++.+|+++|||||+...+.|+|++|+|+|++|+.|++|+|++.||||.+|+++...+||||+|+|++++|+|+|++|
T Consensus 95 Savv~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRDPkVvw~~~~g~w~MviG 174 (546)
T 3ugf_A 95 SATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIG 174 (546)
T ss_dssp EEEECTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCCBCCCEECSTTCEEEEEE
T ss_pred eEEEeeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeeccceEeECCCCEEEEEEE
Confidence 99877799999999999876789999999999999999999999889999877777778999999889878999999999
Q ss_pred eecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEE
Q 008189 201 SRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIG 280 (574)
Q Consensus 201 ~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 280 (574)
++.+..|++++|+|+||++|++.+.++......+||||||||+|+..+.+++.+|+++.+.||||+.|.+..+.++|++|
T Consensus 175 a~~~~~G~vllY~S~DL~~W~~~~~~~~~~~~~gmwECPDlf~l~~~~~~gl~~s~~g~~~k~Vl~~s~~~~~~~~Y~iG 254 (546)
T 3ugf_A 175 AKYNTTGIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAIG 254 (546)
T ss_dssp EEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCEEEEEEEEEESSCSSCCCTTCCSTTEEEEEEEEETTTTEEEEEEE
T ss_pred EccCCcceEEEEECCCCCCceEcccccccCCCCCeEECCeEEEECCcCccceeecccCCceeEEEEecccCCCceEEEEe
Confidence 98877899999999999999999876654344569999999999977667789999988889999999887778899999
Q ss_pred EEeCCCCccccCCCCCCCCcceecccCCCccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEec-CC
Q 008189 281 TYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDG-SG 359 (574)
Q Consensus 281 ~~d~~~~~F~~~~~~~d~~~~~~lD~G~fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~-~g 359 (574)
+||+.+.+|+|+....|...+.++|+|.|||+|||.++++|||||||||+++++..+..+.||+|||||||||+|++ +|
T Consensus 255 ~~d~~~~~f~~~~~~~d~g~~~~lD~GdfYA~qtf~d~~~gRril~gWm~~~d~~~~~~~~gW~g~ltlPRel~l~~~~g 334 (546)
T 3ugf_A 255 TYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPRTVLLDQKTG 334 (546)
T ss_dssp EEETTTTEEEESCGGGCTTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEECTTTS
T ss_pred eecCCCCeeecCCcccccCccccccCCCccCcceeecCCCCCEEEEEeCCCCCcCCCCcccCccCcceeCEEEEEEeCCC
Confidence 99998789998765444445678999999999999997679999999999999876666789999999999999974 45
Q ss_pred CeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecCCCcccccCCCccccccccccc-ccCccc
Q 008189 360 KQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCG-KIGSKV 438 (574)
Q Consensus 360 ~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 438 (574)
.+|+|+||+||++||.+++.+.+..+.++..+.+.+..+.++||+++|+++. +.++.... .+.+..|. ..++..
T Consensus 335 ~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~q~di~~~f~~~~----~~l~~~~~-~~~~~~c~~~~ga~~ 409 (546)
T 3ugf_A 335 TNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEFEIDK----EALEGTIE-ADMGYNCTTSGGAAE 409 (546)
T ss_dssp SSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCCSCCSEEEEEEEEEECC----------------CCCGGGSCGGGS
T ss_pred CEEEEEehHHHHHHhcCcceecceEecCCCeEEecCCCccEEEEEEEEEecc----cccccccc-cccccccccccCccc
Confidence 5799999999999999988888888888877778887788999999998842 11211111 23455676 567878
Q ss_pred ccCccceEEEEEecCCCceeEEEEEEEeeC-CCceEEEEeecCCCCCcccCCccccccceEEEEecCCCeEEEEEEEeCC
Q 008189 439 QGGVGPFGLLTLASKNLEEFTPVFFRIFKD-GHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHS 517 (574)
Q Consensus 439 ~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~-~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S 517 (574)
+|+.++|||.|+++++++|+|.|+|++.+. +++..+.+|+||+||++. ++..++.+++.+++ +.+++++||||||+|
T Consensus 410 ~g~~g~fgl~v~a~~~~~E~T~v~f~~~~~~~~~~~~~~~~D~srSs~~-~~~~~~~~~~~v~v-~~~~~lsLRilvD~S 487 (546)
T 3ugf_A 410 RGVLGPFGLLVSATENLSEQTPVYFYIAKGTDGNFKTFFCLDESRSSKA-SDVSKQVKGFTVPV-LDGEKFTMRLLVDHS 487 (546)
T ss_dssp CBTTBCEEEEEEECTTCSSCEEEEEEEEC----CCEEEEEEECTTSCSC-SSSCCCEEEEECCC-CTTCCEEEEEEEETT
T ss_pred cCcccceEEEEEeCCCCceEEEEEEEeeccCCCcceEEEeeccccccCC-cCCcccccceEeec-CCCCcEEEEEEEecc
Confidence 888899999999999999999999998864 234556799999999987 67777777777655 346889999999999
Q ss_pred eEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCCC
Q 008189 518 VVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569 (574)
Q Consensus 518 ~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~~ 569 (574)
+||+|+|+||.++|+||||..+..+..+|++|++|++.+.+.+|++|+|+++
T Consensus 488 iVE~F~~~Gr~~iTsrvYP~~~~~~~~~l~~fnn~~~~~~~~sl~~W~m~~~ 539 (546)
T 3ugf_A 488 IVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSA 539 (546)
T ss_dssp EEEEEETTTTEEEEEECCCSSSCGGGCEEEEEECCSSCCEEEEEEEEEECCC
T ss_pred eeeeeccCCeEEEEEEecCCcccCCCcEEEEEeCCCCceEEEEEEEeccccc
Confidence 9999999999999999999986445789999999875555569999999998
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-109 Score=915.90 Aligned_cols=527 Identities=61% Similarity=1.090 Sum_probs=451.2
Q ss_pred hccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeE
Q 008189 42 KVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCW 118 (574)
Q Consensus 42 ~~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~ 118 (574)
..+++|||+|||+|+.|||| |++|++|+|||||||+|.++.||+++||||+|+||+||+++|+||.|++.+|.+|||
T Consensus 3 ~~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~G~~ 82 (541)
T 2ac1_A 3 SVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCW 82 (541)
T ss_dssp --CCTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSBEEEEEEECCCSGGGTTCEE
T ss_pred CcCcccccceeecCccCCeeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCccceEECceeecCCCccccCCEE
Confidence 45789999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecC--CCCCCcCccCCeeEEecCCCeEE
Q 008189 119 SGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG--PDVNASAFRDPTTAWWSNDGHWR 196 (574)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~--~~~~~~~fRDP~Vvw~~~~g~~~ 196 (574)
||||+++.+|+++|||||++....|.|++|+|+|++|++|++|+|++.||||.++ +++...+||||+|+|++++|+|+
T Consensus 83 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~w~ 162 (541)
T 2ac1_A 83 SGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWR 162 (541)
T ss_dssp EEEEEECTTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEECTTSCEE
T ss_pred cceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeEeCCCeEE
Confidence 9999886699999999997655689999999999989999999999889999776 67667899999988986699999
Q ss_pred EEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCC---ceEEEEEeecCCc
Q 008189 197 MLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGN---EKFVLKVSLDLTR 273 (574)
Q Consensus 197 M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~---~k~vl~~s~~~~~ 273 (574)
|++|++.+..|++.+|+|+||++|++.+.++.....++||||||||+|+++|.+++.+|+++.+ .||||..|.++..
T Consensus 163 m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~~~~vl~~s~~~~~ 242 (541)
T 2ac1_A 163 VIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTK 242 (541)
T ss_dssp EEEEEEETTEEEEEEEEESSSSSCEECSSCSEEEETSCCEEEEEEEEEESSCSCCCCTTCCCBTTBCEEEEEEEEETTTT
T ss_pred EEEEEecCCceEEEEEECCCCCCcEEcccccccCCCCCcccCCcEEEECCCCcceeEecCCCCCcccceeEEEeeecCCc
Confidence 9999987778999999999999999988776654456899999999999777778899998765 6999999988778
Q ss_pred eeEEEEEEEeCCCCccccCCCCCCCCcceecccCCCccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEE
Q 008189 274 YDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREV 353 (574)
Q Consensus 274 ~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL 353 (574)
.++|++|+||+.+.+|+|+..+.+...+.++|+|.|||+|||.++++|||||||||+++++..++.+.||+|+|||||||
T Consensus 243 ~~~Y~~G~~d~~~~~f~~~~~~~~~~~~~~lD~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel 322 (541)
T 2ac1_A 243 HDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKI 322 (541)
T ss_dssp EEEEEEEEEETTTTEEEECTTCCSSTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCSSCHHHHHHHTEECEECCCEEE
T ss_pred ceEEEEEEEecCCCeEeeCCccccccceeeecCCCcccccEEecCCCCCEEEEEEeCCCCcCCCCCCCCcccccccCEEE
Confidence 89999999998777899887655544467999999999999999756999999999999876556678999999999999
Q ss_pred EEecCCCeEEEcchHHHHhhhcCce-eeccceecCcceEEEcccccceeEEEEEEEecCCCcccccCCCccccccccccc
Q 008189 354 WLDGSGKQLLQWPIEELETLRGKNV-HISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCG 432 (574)
Q Consensus 354 ~l~~~g~~L~q~Pv~el~~Lr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (574)
+|+++|.+|+|+|++||++||.+.+ .+.+..+.++..+.+.+..+.+++++++|++..+.+++.++.+| .+++..|.
T Consensus 323 ~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 400 (541)
T 2ac1_A 323 WLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSW--TDPQLICS 400 (541)
T ss_dssp EECTTSSSEEEEECGGGGGGBCSSCEEEEEEEECTTEEEECCSSCTTEEEEEEEEECSCGGGSEECCTTC--CCHHHHHH
T ss_pred EEEcCCCEEEEeeHHHHHHhhccccccccceEecCCceeEecCCccceeeeEEEEecccccccccccccc--cccccccc
Confidence 9987786699999999999999877 66666666565566677777888999999886544556666666 36667787
Q ss_pred ccCcccccCccceEEEEEecCCCceeEEEEEEEeeC-C--CceEEEEeecCCCCCcccCCccccccceEEEEecCCCeEE
Q 008189 433 KIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKD-G--HKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLS 509 (574)
Q Consensus 433 ~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~-~--~~~~~~~~vDr~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (574)
..++.++++.+.|||.|+++++.+|.|.|+|++.+. + ++..+++++||+||+.. ....++.+++.+++++ +++++
T Consensus 401 ~~g~~~~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~~~Dr~rs~~~-~~~~~~~~~~~~~~~~-~~~~~ 478 (541)
T 2ac1_A 401 KMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLK-EDNDKTTYGAFVDINP-HQPLS 478 (541)
T ss_dssp HTCTTSCCSEEEEEEEEEECTTSSSCEEEEEEEEESSTTCSCEEEEEEEECTTSCSC-TTSCCCCEEEEECCCT-TSCEE
T ss_pred ccccccccCccceEEEEEccCCCcccEEEEEEeccCcccCCceEEEEEeecCccCcc-ccccccccceEEEecC-CCceE
Confidence 777888888889999999998888999999998865 3 45556789999999865 4444555565555443 57899
Q ss_pred EEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCCCcccC
Q 008189 510 LRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKPVKMN 573 (574)
Q Consensus 510 LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~~~~~~ 573 (574)
||||||+|+||||+||||.|||+|+||.....+..+|+++++|++.+++.++++|+|+++ ++|
T Consensus 479 Lri~vD~S~vEvF~n~G~~~~Tsrvyp~~~~~~~~~~~~~~~g~~~~~~~~~~~w~l~~~-~~~ 541 (541)
T 2ac1_A 479 LRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSA-QIS 541 (541)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEECCCSSSCGGGCEEEEEECSSSCEEEEEEEEEEBCCC-CBC
T ss_pred EEEEEeCCEEEEEECCCEEEEEEEeeCCCccCCcceEEEEeCCCceEEEEEEEEEeccee-ecC
Confidence 999999999999999999999999999875333568888888767788899999999998 554
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-109 Score=913.06 Aligned_cols=522 Identities=52% Similarity=1.034 Sum_probs=446.9
Q ss_pred ccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCc-cEEEEeecCCcCCceecccccCCCCCccCCCeE
Q 008189 43 VKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGN-IVWAHSVSKDLINWEALEPALYPSKPFDINGCW 118 (574)
Q Consensus 43 ~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~-~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~ 118 (574)
.+++|||+|||+||.|||| |++|++|+|||||||+|+++.||+ ++||||+|+||+||+++|+||.|+..+|.+|||
T Consensus 3 ~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~Gv~ 82 (543)
T 1st8_A 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSCW 82 (543)
T ss_dssp CSSTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSSSSEEECCCSBCCCSGGGTTEEE
T ss_pred cCccccccccccCCcCCeECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCccceEECCeeccCCCccccCCEE
Confidence 5689999999999999999 999999999999999999999999 999999999999999999999999999999999
Q ss_pred eeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEE
Q 008189 119 SGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRML 198 (574)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~ 198 (574)
||||+++.+|+++|||||++....|.|++|+|+|++|++|++|+|++.||||.+++++...+||||+|+|++++|+|+|+
T Consensus 83 SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~vvw~~~~g~w~mv 162 (543)
T 1st8_A 83 SGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIV 162 (543)
T ss_dssp EEEEEEETTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCCCEECTTSCEEEE
T ss_pred cceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeEEEECCCCcEEEE
Confidence 99998867999999999976556899999999999999999999998899997777777789999998898679999999
Q ss_pred EeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEE
Q 008189 199 VGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYT 278 (574)
Q Consensus 199 ~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~ 278 (574)
+|++.+..|++.+|+|+||++|++.+.++......+||||||||+|+++|.+++.+|+++.+.||||++|. ...++|+
T Consensus 163 ~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~vl~~s~--~~~~~Y~ 240 (543)
T 1st8_A 163 VGGDRDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYT 240 (543)
T ss_dssp EEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCCEEEEEEEEETTCSCCCCTTCCSTTEEEEEEEEE--TTEEEEE
T ss_pred EEEecCCceEEEEEECCCCCCcEECccccccCCCCCceeCCcEEEECCCCccceEecCCCCCceEEEEecc--CCccEEE
Confidence 99987778999999999999999988777654456799999999999878788899999888899999987 4678999
Q ss_pred EEEEeCCCCccccCCCCC--CCCcceecccCCCccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEe
Q 008189 279 IGTYNRDKDRYVPDKDSV--DGWRGLRYDYGNFYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLD 356 (574)
Q Consensus 279 vG~~d~~~~~F~~~~~~~--d~~~~~~lD~G~fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~ 356 (574)
+|+||+.+.+|+|+..+. |...++++|+|.|||+|||.++++||||+||||+++++..++.+.||+|+|||||||+|+
T Consensus 241 iG~~d~~~~~f~~~~~~~~~d~~~~~~lD~GdfYA~qtf~~~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l~ 320 (543)
T 1st8_A 241 IGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALWID 320 (543)
T ss_dssp EEEEETTTTEEEETTCCCCCSSTTSEESBSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEEC
T ss_pred EEEEeCCCCeEeeCCccccccccceeeccCCCcccccEeecCCCCCEEEEEecCCCCcCCCCCCCCccceeeeCEEEEEE
Confidence 999998777899876543 444456999999999999999756999999999999876666678999999999999998
Q ss_pred cCCCeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecCCCcccccCCCcccccccccccccCc
Q 008189 357 GSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGS 436 (574)
Q Consensus 357 ~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (574)
++|.+|+|+|++||++||.+.+.+.+..+..+..+.+.+..+.+++++++|++..+.+++.++..| ++.+..|...++
T Consensus 321 ~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 398 (543)
T 1st8_A 321 RNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISFKLEGLKEAEVLDTTL--VDPQALCNERGA 398 (543)
T ss_dssp TTSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCSSCTTEEEEEEEEEECCGGGSEECCCSS--CCHHHHHHHSCT
T ss_pred eCCCEEEEeEhHHHHHhhcCcccceeEEecCCceEEecccccceeeEEEEEeeccccccccccccc--cccccccccccc
Confidence 778669999999999999988777666666565566777777888999999886544455555554 244455666677
Q ss_pred ccccCccceEEEEEecCCCceeEEEEEEEeeC-CCceEEEEeecCCCCCcccCCccccccceEEEEecCCCeEEEEEEEe
Q 008189 437 KVQGGVGPFGLLTLASKNLEEFTPVFFRIFKD-GHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLID 515 (574)
Q Consensus 437 ~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~-~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD 515 (574)
.++++.+.|||.++++++.+|.|.|+|++.+. +++..+++|+||+||+.. ....++.+++.+++++.+++++||||||
T Consensus 399 ~~~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~Dr~rs~~~-~~~~~~~~~~~~~~~~~~~~~~LrI~vD 477 (543)
T 1st8_A 399 SSRGALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVR-SNIDTTSYGAFVDIDPRSEEISLRNLID 477 (543)
T ss_dssp TSCCSSCCEEEEEEECTTSSSCEEEEEEEEECTTSCEEEEEEEECTTSCSC-SSCCCCCEEEEECCCTTTSCEEEEEEEE
T ss_pred cccccccceEEEEEccCCCcccEEEEEEeecccCCeEEEEEEecccccCcc-ccccccccceEEEEeccCCeEEEEEEEe
Confidence 77777889999999998888999999998875 445566789999999865 4444555565555544467899999999
Q ss_pred CCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCCC
Q 008189 516 HSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569 (574)
Q Consensus 516 ~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~~ 569 (574)
+||||||+||||.|||+|+||.....+..+|+++++|++.+++.++++|+|+++
T Consensus 478 ~SsvEvF~n~G~~~~TsRvyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~l~~~ 531 (543)
T 1st8_A 478 HSIIESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNA 531 (543)
T ss_dssp TTEEEEEEGGGTEEEEEECCCSGGGTSCCEEEEEECSSSCEEEEEEEEEEECCC
T ss_pred CCEEEEEECCCEEEEEEEeecCCccCCcceEEEEeCCCceEEEEEEEEEechhh
Confidence 999999999999999999999875334578888887767788899999999998
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-98 Score=822.71 Aligned_cols=455 Identities=27% Similarity=0.494 Sum_probs=368.5
Q ss_pred ccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEe
Q 008189 43 VKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWS 119 (574)
Q Consensus 43 ~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~S 119 (574)
.+++|||+|||+||.|||| |++|++|+|||||||+|+++.||+++||||+|+|||||+++|+||.|+..+|.+||||
T Consensus 35 ~~~~~Rp~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL~P~~~~d~~g~~S 114 (526)
T 3pij_A 35 RNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVFS 114 (526)
T ss_dssp CCCSSCCSSSCBCSSEEEEEEEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESSSSSEEECCCCBCCCBGGGTTEEEE
T ss_pred cCCCccccEeEeCCcCCeeCCeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCCCCCceeCeeccCCCCccccCCeEe
Confidence 3678999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEcCCCeeEEEEeeecC--------CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecC
Q 008189 120 GSATVLPGNKPIILYTGVDH--------KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSN 191 (574)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~--------~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~ 191 (574)
|||+++.+|+++|+|||+.. ...|+|++|+|+|++ |++|+|+ +|||..|++....+||||+| |+ +
T Consensus 115 GSav~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~g---l~~w~K~--~pvi~~P~~~~~~~fRDP~V-~~-~ 187 (526)
T 3pij_A 115 GSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE---LTSATKQ--GMIIDCPTDKVDHHYRDPKV-WK-T 187 (526)
T ss_dssp EEEEECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTT---CSCEEEE--EEEECCCGGGEEEEEEEEEE-EE-E
T ss_pred ceEEEccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCC---cceEEEC--CccccCCCCccccccccCEE-EE-E
Confidence 99998778899999999842 124899999999864 5899997 48886654445689999996 55 6
Q ss_pred CCeEEEEEeeec-CCeeEEEEEEeCCCCCCEEccccccc-CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 192 DGHWRMLVGSRR-KHRGMAYLYRSRDFMKWTKAKHPIHS-LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 192 ~g~~~M~~g~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
+|+|||++|++. +..|+|++|+|+||++|++.+.++.. ...++||||||||+|+ |.+ ++.||||++|.
T Consensus 188 ~g~w~mv~ga~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~~~~~g~mwECPdlf~l~--~~~--------g~~k~vL~~s~ 257 (526)
T 3pij_A 188 GDTWYMTFGVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIK--DKD--------GNEKWVIGFSA 257 (526)
T ss_dssp TTEEEEEEEEEETTSCEEEEEEEESSSSSCEEEEEEEECSCTTCCEEEEEEEEEEE--CTT--------SCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcEEEEEECCCCCcceEcCcccccCCCccCeEECCEEEEEC--CCC--------CceeEEEEEec
Confidence 899999999875 56899999999999999999864333 3457899999999998 322 24599999886
Q ss_pred cC----------CceeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCC
Q 008189 270 DL----------TRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDD 338 (574)
Q Consensus 270 ~~----------~~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~ 338 (574)
.+ ...++|++|+||. +.+|+|+.. ++++|+|+ |||+|||. + +||||+||||++|++..+.
T Consensus 258 ~g~~~~~~~~~~~~~~~Y~vG~~d~-~~~f~~~~~------~~~lD~G~dfYA~qtf~-~-~gRri~~gW~~~~~~~~~~ 328 (526)
T 3pij_A 258 MGSKPSGFMNRNVSNAGYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFN-V-DGRQIVYGWMSPFVQPIPM 328 (526)
T ss_dssp ESCCCBTTBSCSSSEEEEEEEEECT-TSCEEESSC------CEESCCSSSCEEEEEEE-E-TTEEEEEEEECCCSSCCGG
T ss_pred cccCCCccccccccceeEEEEEEcC-CCcEEECCc------ceeeeeCCCccccceeC-C-CCCEEEEEecCCCcccCCC
Confidence 42 3468999999993 258988753 57899999 99999998 3 7999999999999988777
Q ss_pred CCCCccccccccEEEEEecCCCeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecCCCccccc
Q 008189 339 MAKGWAGVQTIPREVWLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKF 418 (574)
Q Consensus 339 ~~~gW~g~lslPReL~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 418 (574)
.+.+|+|+|||||||+|+++| +|+|+|++||++||.+.+.+.+..+..+....+.. .+.+++|+++|++..
T Consensus 329 ~~~gW~g~ltlPRel~l~~~g-~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~-~~~~~el~~~~~~~~------- 399 (526)
T 3pij_A 329 EDDGWCGQLTLPREITLGDDG-DVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIAD-DAEAVEIEMTIDLAA------- 399 (526)
T ss_dssp GGGTEECEECCCEEEEECTTS-SEEEEECGGGGGGBSCCEEEEEEEECSSEEEEEES-CCSSEEEEEEEETTT-------
T ss_pred CCCCccceEEeCEEEEEEeCC-cEEEeecHHHHHhhhCcccccceEeccCCceEecC-CCcEEEEEEEEEECC-------
Confidence 789999999999999998777 59999999999999988776665554433333322 345678888776631
Q ss_pred CCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccceE
Q 008189 419 DPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGF 498 (574)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~ 498 (574)
+..+.|||.|+++.++ +.|.|.|+... +. +++||++|+.. . ..++..
T Consensus 400 ---------------------~~~~~~gl~l~~~~~~-e~t~i~yd~~~---~~---l~~DR~~s~~~-~----~~~~~~ 446 (526)
T 3pij_A 400 ---------------------STAERAGLKIHATEDG-AYTYVAYDGQI---GR---VVVDRQAMANG-D----RGYRAA 446 (526)
T ss_dssp ---------------------CCCSEEEEEEEECTTS-CCEEEEEETTT---TE---EEEECTTCSSS-C----CCEEEE
T ss_pred ---------------------CCcceEEEEEEECCCC-cEEEEEEEeCC---CE---EEEECCCCCCC-C----CccceE
Confidence 0113699999987775 88999998642 32 45799998754 1 112221
Q ss_pred E--EEecCCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCCC
Q 008189 499 V--NVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569 (574)
Q Consensus 499 ~--~~~~~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~~ 569 (574)
. ++.+.+++++||||||+||||||+||||.|||+||||... ..+|.++++| +++++.+|++|+|+++
T Consensus 447 ~~~~~~~~~~~~~LrI~vD~SsvEvF~n~G~~v~Tsrvyp~~~---~~~i~l~a~g-g~~~~~~l~~~~l~~~ 515 (526)
T 3pij_A 447 PLTDAELASGKLDLRVFVDRGSVEVYVNGGHQVLSSYSYASEG---PRAIKLVAES-GSLKVDSLKLHHMKSI 515 (526)
T ss_dssp ECCHHHHHHSEEEEEEEECSSEEEEEETTTTEEEEEECCCCSS---CCEEEEEEES-SCEEEEEEEEEEBCCC
T ss_pred EEeeecCCCCcEEEEEEEeCCEEEEEECCCeEEEEEEEcCCCC---CceEEEEEcC-CeEEEEEEEEEecccc
Confidence 1 1112246899999999999999999999999999999875 2345555554 3688999999999987
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-96 Score=803.73 Aligned_cols=457 Identities=24% Similarity=0.448 Sum_probs=357.1
Q ss_pred chhhhccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccC
Q 008189 38 LAAVKVKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDI 114 (574)
Q Consensus 38 ~~~~~~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~ 114 (574)
+.++..+++|||+|||+|+.|||| |++|++|+|||||||+|+++.||+||||||+|+|||||+++|+|| | |.
T Consensus 19 ~~~~~~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL-~----d~ 93 (516)
T 3sc7_X 19 LPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPTAI-A----DE 93 (516)
T ss_dssp -----CCSTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESSSSSCEEEEEEE-C----CB
T ss_pred hhhhhcCCCccccEeecCCcCCcCCCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCCCCcceecCccc-c----CC
Confidence 345678899999999999999999 999999999999999999999999999999999999999999999 4 34
Q ss_pred CCe--EeeeEEEcCCC----------eeEEEEeeecC-CCcceEEEEEecCCCCcccceeeccCCCceEecCC----CCC
Q 008189 115 NGC--WSGSATVLPGN----------KPIILYTGVDH-KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGP----DVN 177 (574)
Q Consensus 115 ~gv--~SGsav~~~dg----------~~~l~YTg~~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~----~~~ 177 (574)
+|| |||||+++.++ .++|||||+.+ .+.|.|++|+|+|.+ ++|+|+++||||.+++ ++.
T Consensus 94 ~g~~~~SGSav~~~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g----~~w~k~~~nPVi~~~~~~~~~~~ 169 (516)
T 3sc7_X 94 NGVEAFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDIT 169 (516)
T ss_dssp TTEEEEEEEEEECTTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTT----SCCEECTTCCSBCHHHHTTTCTT
T ss_pred CCceeEeceEEEeCCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCC----ceEEEcCCCceEcCCCccccccc
Confidence 565 99999987553 48999999865 367999999999864 8999998899996432 221
Q ss_pred -CcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCC-----CCccccceeEEeccCCCCc
Q 008189 178 -ASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLAN-----TGMWECPDFYPVSISGKNG 251 (574)
Q Consensus 178 -~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~-----~~~wEcPdlf~l~~~g~~~ 251 (574)
..+||||+|+|.+++|+|+|++|++. .|+|.+|+|+||++|++.+.+...... ++||||||||+|+++|.
T Consensus 170 ~~~~fRDPkV~~~~~~g~w~mv~g~~~--~~~i~ly~S~DL~~W~~~~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~-- 245 (516)
T 3sc7_X 170 GGLESRDPKVFFHRQSGNWIMVLAHGG--QDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT-- 245 (516)
T ss_dssp SSSSCEEEEEEEETTTTEEEEEEECBT--TCEEEEEEESSSSSCEEEEEEEGGGSTTCCTTCCCBCCCEEEEEECSSS--
T ss_pred CCCcccCCeEEEECCCCeEEEEEEECC--CCEEEEEECCCCCCceEcccccccCCCCcccccceEECCcEEEecccCC--
Confidence 24799999888767899999998642 468999999999999999864432222 25999999999986552
Q ss_pred cccccCCCCceEEEEEeecC-----CceeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-Cccceeeee--CCCCcE
Q 008189 252 LDTSFAGGNEKFVLKVSLDL-----TRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFD--SRKNRR 323 (574)
Q Consensus 252 ~~~~~~~~~~k~vl~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~--~~~gr~ 323 (574)
.+.||||++|++. ...++|++|+||+. +|+++... ...+++|+|+ |||+|||.+ .++|||
T Consensus 246 -------~~~k~VL~~s~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~---~~~~~lD~G~DfYA~qtf~~~~~~~gRr 313 (516)
T 3sc7_X 246 -------EETTWVVMMTPAEGSPAGGNGVLAITGSFDGK--SFTADPVD---ASTMWLDNGRDFDGALSWVNVPASDGRR 313 (516)
T ss_dssp -------SCEEEEEEECCSSCCTTSSSCCEEEEEEECSS--CEEECCCC---TTTSBSCSSSSCEEEEECBSCCTTTCCC
T ss_pred -------CCceEEEEECCCCCCCCCCCceEEEEEEccCC--eeEeCCCC---ccceeEEcCCCccccccccCCcCCCCCE
Confidence 2359999999854 24679999999985 78875421 1246899999 999999974 247999
Q ss_pred EEEEeccCCCCCCCCCCCCccccccccEEEEEec-CC-CeEEEcchHHHHhhhcCceeeccceecCcceEEEccccccee
Q 008189 324 ILWGWANESDSTFDDMAKGWAGVQTIPREVWLDG-SG-KQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQA 401 (574)
Q Consensus 324 i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~-~g-~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (574)
|+|+||++++.. .++.+|+|||||||||+|++ +| .+|+|+||+||++||.+...+.+..+..+.. .+.++.+.++
T Consensus 314 i~w~w~~~~~~~--~pt~gW~g~ltlPRel~l~~~~~~~~L~q~Pv~El~~Lr~~~~~~~~~~~~~~~~-~l~~~~~~~~ 390 (516)
T 3sc7_X 314 IIAAVMNSYGSN--PPTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQT-LLSSIRGTAL 390 (516)
T ss_dssp EEEEEECCSTTC--SSCSSEECEECCCEEEEEEEETTEEEEEEEECGGGGGGEEEEEEEEEEEECTTCC-BSTTCCCSSE
T ss_pred EEEEECCCccCC--CCCCCcccccccCEEEEEEecCCceEEEeCCHHHHHhhhccceeecceEecCCce-EccCCCceEE
Confidence 999999877643 34579999999999999985 33 4799999999999999776665555544432 2344556778
Q ss_pred EEEEEEEecCCCcccccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCC
Q 008189 402 DVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDAS 481 (574)
Q Consensus 402 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~ 481 (574)
+|+++|++.. ...|||.++.+. +|+|.|.|+..+ +. +++||+
T Consensus 391 el~~~~~~~~------------------------------~~~fgl~l~~~~--~e~t~i~~d~~~---~~---l~~DR~ 432 (516)
T 3sc7_X 391 DVRVAFYPDA------------------------------GSVLSLAVRKGA--SEQTVIKYTQSD---AT---LSVDRT 432 (516)
T ss_dssp EEEEEEEECT------------------------------TCEEEEEEEECS--SCCEEEEEETTT---TE---EEEECT
T ss_pred EEEEEEEcCC------------------------------CCEEEEEEecCC--CcEEEEEEEccC---CE---EEEecC
Confidence 8888876521 025899998875 678999998653 22 578999
Q ss_pred CCCcccCCccccccceEEEEec---CCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEE
Q 008189 482 SSTLKTEGLYKPSFAGFVNVDL---SDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTV 558 (574)
Q Consensus 482 ~s~~~~~~~~~~~~~~~~~~~~---~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i 558 (574)
+|+.. ...+.++..+..++ .+++++||||||+||||||+||||.|||+||||... ..+|.++++| +++++
T Consensus 433 ~sg~~---~~~~~~~~~~~~~l~~~~~~~~~Lri~vD~SsvEvF~n~G~~v~Tsrvyp~~~---~~~i~l~a~g-G~~~~ 505 (516)
T 3sc7_X 433 ESGDI---SYDPAAGGVHTAKLEEDGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSDS---SDGLALEVTG-GNAVL 505 (516)
T ss_dssp TSSCC---CSCTTSSSEEEEECCCCTTSCEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEES-SCEEE
T ss_pred CCCCc---cccCCcceEEEeeeccCCCCcEEEEEEEeCcEEEEEECCCEEEEEEEecCCCC---CCeEEEEEcC-CcEEE
Confidence 98743 12333444444333 257899999999999999999999999999999875 3455556555 47899
Q ss_pred eEEeeecCC
Q 008189 559 EKLNAWSMK 567 (574)
Q Consensus 559 ~~l~~w~m~ 567 (574)
.++++|+|+
T Consensus 506 ~~l~v~~l~ 514 (516)
T 3sc7_X 506 QSVDVRSVS 514 (516)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEee
Confidence 999999986
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-96 Score=806.53 Aligned_cols=464 Identities=27% Similarity=0.463 Sum_probs=367.2
Q ss_pred ccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceeccccc----CCCCCccCC
Q 008189 43 VKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAL----YPSKPFDIN 115 (574)
Q Consensus 43 ~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al----~P~~~~D~~ 115 (574)
.+++|||+|||+|+.|||| |++|++|+|||||||+|+++.||+++||||+|+||+||+++|+|| .|+ +|.+
T Consensus 3 ~~~~~Rp~~H~~P~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dlv~W~~~~~al~~~g~P~--~d~~ 80 (518)
T 1y4w_A 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGS--DVTE 80 (518)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTS--CCCB
T ss_pred CCCCccccEeeeCCcCceECCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCccEEECCceEecCCCCC--CCCC
Confidence 4678999999999999999 999999999999999999999999999999999999999999999 775 5778
Q ss_pred CeEeeeEEEcCCC----------eeEEEEeeecCC------------CcceEEEEEecCCCCcccceeecc-CCCceEec
Q 008189 116 GCWSGSATVLPGN----------KPIILYTGVDHK------------ERQVQNYAVPANPSDPYLRKWIKP-DNNPVVFP 172 (574)
Q Consensus 116 gv~SGsav~~~dg----------~~~l~YTg~~~~------------~~~~q~lA~s~D~~d~~l~~w~k~-~~~Pvi~~ 172 (574)
|||||||+++.+| +++|||||+.+. +.|+|++|+|+|++ ++|+|+ +++|||.+
T Consensus 81 g~~SGsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g----~~w~k~~~~~pvi~~ 156 (518)
T 1y4w_A 81 MYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPN 156 (518)
T ss_dssp EEEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCS
T ss_pred ceEeeeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCC----ceEEEcCCCCCeEec
Confidence 9999999987554 899999998642 24899999999864 899998 78999975
Q ss_pred CCC---CCCcCccCCeeEEecCCCeEEEE--EeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccC
Q 008189 173 GPD---VNASAFRDPTTAWWSNDGHWRML--VGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSIS 247 (574)
Q Consensus 173 ~~~---~~~~~fRDP~Vvw~~~~g~~~M~--~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~ 247 (574)
++. ....+||||+|+|.+++|+|||+ +|++. .|.+|+|+||++|++.+.+......++||||||||+|.++
T Consensus 157 ~~~~y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~~----~i~ly~S~DL~~W~~~~~~~~~~~~~~mwECPdlf~l~~~ 232 (518)
T 1y4w_A 157 PPSPYEAEYQNFRDPFVFWHDESQKWVVVTSIAELH----KLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLD 232 (518)
T ss_dssp CCTTCGGGTTSEEEEEEEEETTTTEEEEEEEEGGGT----EEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBT
T ss_pred CCcccccCCCCcCCCcEeEECCCCcEEEEEEecCCC----eEEEEECCCCCCCeECccccccCCCCCeEECCeEEEeecC
Confidence 442 24689999998887668999999 66542 5999999999999998865433345789999999999654
Q ss_pred CCCccccccCCCCceEEEEEeecC-------CceeEEEEEEEeCCCCccccCCCCC--CCCcceecccCC-Cccceeeee
Q 008189 248 GKNGLDTSFAGGNEKFVLKVSLDL-------TRYDYYTIGTYNRDKDRYVPDKDSV--DGWRGLRYDYGN-FYASKTFFD 317 (574)
Q Consensus 248 g~~~~~~~~~~~~~k~vl~~s~~~-------~~~~~Y~vG~~d~~~~~F~~~~~~~--d~~~~~~lD~G~-fYA~~t~~~ 317 (574)
|. .+.||||++|.+. ...++|++|+||+. +|+|+.... ....+.++|+|+ |||+|||.+
T Consensus 233 g~---------~~~k~vL~~s~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d 301 (518)
T 1y4w_A 233 SG---------NSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNG 301 (518)
T ss_dssp TS---------SCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBS
T ss_pred CC---------CceeEEEEeccCCCCccccccCCcEEEEEEeeCC--EEEeCCcccccccccceEEccCCCCcccccccc
Confidence 41 2359999999754 34689999999974 798875211 112367999998 999999998
Q ss_pred CCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEec-CC-CeEEEcchHHHHhhhcCceeeccceecCcceEEEcc
Q 008189 318 SRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDG-SG-KQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKG 395 (574)
Q Consensus 318 ~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~-~g-~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~ 395 (574)
.++|||||||||++|++....++.+|+|+|||||||+|++ +| .+|+|+|++||++||.+.+.+.+..+..+....+.+
T Consensus 302 ~~~gRri~~gWm~~~~~~~~~pt~gW~g~ltlPRel~l~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~~~~~~ 381 (518)
T 1y4w_A 302 LSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNTT 381 (518)
T ss_dssp CCGGGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEECSCGGGTBCSSCSEEEEEEEECSEECCCE
T ss_pred CCCCCEEEEEecCCCccccccCCCCcCcccccCeEEEEEecCCcCeEEEeehHHHHhhhccceeccceeeccccceeecC
Confidence 5589999999999998765455689999999999999985 33 479999999999999987655444443332223333
Q ss_pred cccceeEEEEEEE-ecCCCcccccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEE
Q 008189 396 VTAAQADVEVTFK-LPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLV 474 (574)
Q Consensus 396 ~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~ 474 (574)
..+.+++|+++|+ .. ..+.|||.|+.+.++++.|.|.|+..+ +.
T Consensus 382 ~~~~~~el~~~~~~~~------------------------------~~~~~gl~l~~~~~~~e~~~i~~~~~~---~~-- 426 (518)
T 1y4w_A 382 TTGETFKVDLSFSAKS------------------------------KASTFAIALRASANFTEQTLVGYDFAK---QQ-- 426 (518)
T ss_dssp ECCSSEEEEEEEETTC------------------------------SSSEEEEEEEECTTSSSCEEEEEETTT---TE--
T ss_pred CCCeEEEEEEEEecCC------------------------------CCccEEEEEEcCCCCceeEEEEEEecC---CE--
Confidence 4455677777664 21 113699999988877789999998653 22
Q ss_pred EEeecCCCCCcccCCccccccceEEEEec---CCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeC
Q 008189 475 LMCSDASSSTLKTEGLYKPSFAGFVNVDL---SDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNN 551 (574)
Q Consensus 475 ~~~vDr~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~ 551 (574)
+++||++|+.. .. .+.++..+.+++ ..+.++||||||+|+||||+||||.|||+|+||... ..+|+++++
T Consensus 427 -l~~dr~~s~~~--~~-~~~~~~~~~~~~~~~~~~~~~lri~vD~SsvEvF~n~G~~~~T~rvyp~~~---~~~i~~~~~ 499 (518)
T 1y4w_A 427 -IFLDRTHSGDV--SF-DETFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSSD---AVHARLAST 499 (518)
T ss_dssp -EEEECTTSSCC--TT-CTTTSCEEEEECCCCTTSEEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEE
T ss_pred -EEEecCCCCCC--cc-cCcccceEEEEeecCCCCeEEEEEEEeCCEEEEEECCCEEEEEEEecCCCC---CCEEEEEEC
Confidence 67899998753 11 123333333332 357899999999999999999999999999999865 346666766
Q ss_pred CceeEEEeEEeeecCCCCc
Q 008189 552 GTETVTVEKLNAWSMKKPV 570 (574)
Q Consensus 552 g~~~~~i~~l~~w~m~~~~ 570 (574)
| +.+++.++++|+|+++-
T Consensus 500 ~-g~~~~~~~~~~~l~s~w 517 (518)
T 1y4w_A 500 G-GTTEDVRADIYKIASTW 517 (518)
T ss_dssp S-SCEEEEEEEEEEBCCCC
T ss_pred C-CeEEEEEEEEEeccccc
Confidence 5 57889999999999984
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-94 Score=787.74 Aligned_cols=461 Identities=22% Similarity=0.396 Sum_probs=358.5
Q ss_pred ccCcccccceeecCCCcee---eeEEE--CCEEEEEEeeCCCCCCCCc-cEEEEeecCCcCCceecccccCCCCCccCCC
Q 008189 43 VKQLHRTAFHFQPPKHWIN---GPMYY--KGIYHLFYQYNPKGAVWGN-IVWAHSVSKDLINWEALEPALYPSKPFDING 116 (574)
Q Consensus 43 ~~~~~RP~~H~~p~~gw~N---g~~~~--~G~yHlfyq~~P~~~~~g~-~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~g 116 (574)
..+.|||+|||+|+.|||| |++|+ +|+|||||||+|+++.||+ ||||||+|+|||||+++|+||.|+. |.+|
T Consensus 5 ~~~~~Rp~~H~~P~~gwmNDPNG~~y~~~~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DLvhW~~~~~aL~P~~--d~~G 82 (509)
T 3kf3_A 5 TSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEH--DNEG 82 (509)
T ss_dssp CHHHHSCSSSCCCSSEEEEEEEEEEEETTTTEEEEEEEEETTCSSCCSSBEEEEEEESSSSSCEECSCCBCCSS--TTCE
T ss_pred ccccccccEeecCCcCCeeCCcceEEeCCCCEEEEEEecCCCCCCCCCcCEEEEEEccCCCCcEECcccccccc--cCCC
Confidence 4568999999999999999 99998 5999999999999999994 9999999999999999999999986 7799
Q ss_pred eEeeeEEEcCC-------------CeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccC
Q 008189 117 CWSGSATVLPG-------------NKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRD 183 (574)
Q Consensus 117 v~SGsav~~~d-------------g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRD 183 (574)
||||||+++.+ |+++|+|||+. ...|.|++|+|.|++ .+|+|++.||||..+ ..+|||
T Consensus 83 ~~SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~-~~~q~q~lA~S~D~g----~~~~k~~~nPVi~~~----~~~fRD 153 (509)
T 3kf3_A 83 IFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNI-PDNQTQDIAFSLDGG----YTFTKYENNPVIDVS----SNQFRD 153 (509)
T ss_dssp EEEEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEE-TTEEEEEEEEESSSS----SSCEECTTCCSBCCS----CSSCEE
T ss_pred EEeceEEEeCCccccccccccCCCCceEEEECCCC-CCCeeEEEEEECCCC----cceEEcCCCceEcCC----CCcccC
Confidence 99999998643 47999999976 357999999999964 799999889999642 479999
Q ss_pred CeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceE
Q 008189 184 PTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKF 263 (574)
Q Consensus 184 P~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~ 263 (574)
|+|+|++++|+|+|++|+.. .|+|++|+|+||++|++.+.+.. +..++||||||||+|+++|. .+.||
T Consensus 154 PkVfw~~~~g~w~Mv~g~~~--~g~i~ly~S~DL~~W~~~~~~~~-~~~G~mwECPdlf~l~~~~~---------~~~k~ 221 (509)
T 3kf3_A 154 PKVFWHEDSNQWIMVVSKSQ--EYKIQIFGSANLKNWVLNSNFSS-GYYGNQYECPGLIEVPIENS---------DKSKW 221 (509)
T ss_dssp EEEEEETTTTEEEEEEEEGG--GTEEEEEEESSSSSCEEEEEECC-BCCCSCEEEEEEEEEEBTTS---------SCEEE
T ss_pred CeEEEECCCCEEEEEEEECC--CCEEEEEECCCCCCceEcccccc-CCccceeECCeEEEECccCC---------CCceE
Confidence 99988877899999998643 47899999999999999987554 45567999999999986541 34699
Q ss_pred EEEEeecC-----CceeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCC
Q 008189 264 VLKVSLDL-----TRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFD 337 (574)
Q Consensus 264 vl~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~ 337 (574)
||++|.++ ...++|++|+||+. +|+|+.. .++++|+|+ |||+|||.+ ++||||+||||++|++...
T Consensus 222 vL~~s~~~~~p~g~~~~~Y~vG~~d~~--~f~~~~~-----~~~~lD~G~DfYA~qtf~~-~~grri~igWm~~~~~~~~ 293 (509)
T 3kf3_A 222 VMFLAINPGSPLGGSINQYFVGDFDGF--QFVPDDS-----QTRFVDIGKDFYAFQTFSE-VEHGVLGLAWASNWQYADQ 293 (509)
T ss_dssp EEEEEECSCCTTSSCEEEEEEEEECSS--CEEESSC-----BCEESCCSSSCEEEEECBS-CSSSEEEEEECSCTTTTTT
T ss_pred EEEEccCCCCCCCCCceEEEEEEEeCC--EEEecCc-----cceeeccCCcceeeceeeC-CCCCEEEEEecCCcccccC
Confidence 99998753 35689999999974 8988763 247899999 999999954 5899999999999998766
Q ss_pred CCCCCccccccccEEEEEecC--C-----CeEEEcchH-HHHhhhcCceeeccceecCcceEEEc--ccccceeEEEEEE
Q 008189 338 DMAKGWAGVQTIPREVWLDGS--G-----KQLLQWPIE-ELETLRGKNVHISNQELKKGHHVEVK--GVTAAQADVEVTF 407 (574)
Q Consensus 338 ~~~~gW~g~lslPReL~l~~~--g-----~~L~q~Pv~-el~~Lr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~ 407 (574)
.++.+|+|||||||||+|++. | .+|+|+||+ ||++||.... +.+..+.++..+.+. +.. .+++++++|
T Consensus 294 ~p~~~W~g~~tlPRel~l~~~~~~~~~~~~~L~q~Pv~~el~~lr~~~~-~~~~~~~~~~~~~~~~~~~~-~~~el~~~~ 371 (509)
T 3kf3_A 294 VPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLK-KKNVKLTNKKPIKTNFKGST-GLFDFNITF 371 (509)
T ss_dssp SSCCSEECCBCCCEEEEEEEEESSSSCEEEEEEEEECCCTTSEEEEEEE-EEEEECCTTSCEECCCSCCC-SEEEEEEEE
T ss_pred CCCCCcccccccCEEEEEEecccCCCCCccEEEEEEcHHHHHHhhCcce-ecceEecCCceeEEecCCCC-ceEEEEEEE
Confidence 667899999999999999861 1 279999999 9999996544 555555554433322 222 357777777
Q ss_pred EecCCCcccccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCccc
Q 008189 408 KLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKT 487 (574)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~ 487 (574)
++... +.+ . .+....|+|.++.+.+.++.|.|.||... +. +.+||++|+..
T Consensus 372 ~~~~~---~~~-------~------------~~~~~~~~l~l~~~~~~~e~~~i~yd~~~---~~---l~~DR~~sg~~- 422 (509)
T 3kf3_A 372 KVLNL---NVS-------P------------GKTHFDILINSQELNSSVDSIKIGFDSSQ---SS---FYIDRHIPNVE- 422 (509)
T ss_dssp EECSC---CCC-------G------------GGSEEEEEEEECCSSSCCCEEEEEEETTT---TE---EEEECCCTTCC-
T ss_pred ecccc---ccc-------c------------cccceeEEEEEEecCCCCcEEEEEEECCC---CE---EEEECCCCCCC-
Confidence 65310 000 0 01113578888766677789999998643 32 56799998742
Q ss_pred CCccccccceEEEE--ec-----CCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCce-eEEEe
Q 008189 488 EGLYKPSFAGFVNV--DL-----SDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTE-TVTVE 559 (574)
Q Consensus 488 ~~~~~~~~~~~~~~--~~-----~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~-~~~i~ 559 (574)
. ...+.+.....+ .+ ..+.++||||||+||||||+|||+.|||+||||.++.. -.+|.+++++.+ .++|.
T Consensus 423 ~-~~~~~~~~~~~~~~~p~~~~~~~~~~~L~i~vD~ssvEvF~ndG~~v~T~~iFP~~~~~-~~~l~~~s~~~g~~~~i~ 500 (509)
T 3kf3_A 423 F-PRKQFFTDKLAAYLEPLDYDQDLRVFSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGKY-PHDIQIVTDTEEPLFELE 500 (509)
T ss_dssp C-TTGGGCCCEEEEECCCSEEETTEEEEEEEEEEETTEEEEEETTTTEEEEEECCCSTTCC-EEEEEEEECCSSCSEEEE
T ss_pred c-ccCccccceeEEeeccccccccCCeEEEEEEEeccEEEEEECCCEEEEEEEEcCCCCCC-CceEEEEEcCCCeEEEEE
Confidence 0 011112222112 11 23579999999999999999999999999999987521 234555665334 57899
Q ss_pred EEeeecCC
Q 008189 560 KLNAWSMK 567 (574)
Q Consensus 560 ~l~~w~m~ 567 (574)
++++.+|.
T Consensus 501 ~~~~~~l~ 508 (509)
T 3kf3_A 501 SVIIRELN 508 (509)
T ss_dssp EEEEEEEE
T ss_pred EEEEEecC
Confidence 99998874
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-94 Score=781.20 Aligned_cols=444 Identities=21% Similarity=0.360 Sum_probs=350.1
Q ss_pred cccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEE
Q 008189 48 RTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATV 124 (574)
Q Consensus 48 RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~ 124 (574)
.|+|||+||.|||| |++|++|+|||||||+|+++.||+ ||||+|+|||||+++|+||.|++ ..|||||||++
T Consensus 1 ~P~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~~g~--WgHa~S~DLvhW~~~~~aL~P~~---~~g~~SGSav~ 75 (492)
T 4ffh_A 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG--WDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAVV 75 (492)
T ss_dssp -CCSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSTTCCCE--EEEEEESSSSSCEEEEEEECCBT---TBCCCCEEEEE
T ss_pred CCcEeEcCCCCCeeCCeeeEEECCEEEEEEECCCCCCCCCc--EEEEEeCCCCccEECCCCCCCCC---CCCEEeceEEE
Confidence 48999999999999 999999999999999999999998 99999999999999999999985 48999999998
Q ss_pred cCCCe-------eEEEEeeecC--CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcC---------ccCCee
Q 008189 125 LPGNK-------PIILYTGVDH--KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASA---------FRDPTT 186 (574)
Q Consensus 125 ~~dg~-------~~l~YTg~~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~---------fRDP~V 186 (574)
+.+|+ ++|||||+.+ .+.|+|++|+|+|++ ++|+|+ +||||.+|...+... ||||+|
T Consensus 76 ~~~~~~g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g----~~w~k~-~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V 150 (492)
T 4ffh_A 76 DTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG----FTFTAL-PDPVIVNTDGRAATTPAEIENAEWFRDPKI 150 (492)
T ss_dssp ETTCSSSSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSS----SSCEEC-SSCSBCCTTTTTCCSHHHHHHHTCEEEEEE
T ss_pred eCCCccccCCCcEEEEEeecccCCCCcEEEEEEEeCCCC----ceEEEc-CccccCCCCccccccccccccCCCCcCCEE
Confidence 76664 9999999864 357999999999964 899999 899997644321111 999998
Q ss_pred EEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEE
Q 008189 187 AWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLK 266 (574)
Q Consensus 187 vw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~ 266 (574)
+|.+++|+|||++ ++ .++|.+|+|+||++|++.+.+......++||||||||+|++++ ++.||||+
T Consensus 151 ~~~~~~g~w~mv~-a~---~~~i~ly~S~DL~~W~~~~~~~~~~~~g~mwECPdlf~l~~~~----------~~~k~vL~ 216 (492)
T 4ffh_A 151 HWDTARGEWVCVI-GR---LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRHWVLA 216 (492)
T ss_dssp EEETTTTEEEEEE-EE---TTEEEEEEESSSSSCEECCCEECSCGGGCCCEEEEEEEEECTT----------SCEEEEEE
T ss_pred EEECCCCEEEEEE-EC---CCeEEEEECCCCCCceEeccccccCCccceEECCeEEEECCCC----------CCceEEEE
Confidence 8776789999999 44 2589999999999999998755433456899999999998542 24699999
Q ss_pred EeecC-----CceeEEEEEEEeCCCCccccCCCCCCCCcceecccCC-Cccceeee--eCCCCcEEEEEeccCCCCC---
Q 008189 267 VSLDL-----TRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFF--DSRKNRRILWGWANESDST--- 335 (574)
Q Consensus 267 ~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~--~~~~gr~i~~gW~~~~~~~--- 335 (574)
+|.++ ...++|++|+||+ .+|+|+.. .++++|+|+ |||+|||. +.++||||+||||++|++.
T Consensus 217 ~s~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~~grri~~gW~~~~~~~~~~ 289 (492)
T 4ffh_A 217 ASMDAYGIGLPMTYAYWTGTWDG--EQFHADDL-----TPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWKYAARD 289 (492)
T ss_dssp EECCCGGGTCCSSEEEEEEEECS--SCEEESCS-----SCEESCCSSCCEEEEEEECSSCTTTCEEEEEECCCTTTCSSC
T ss_pred EccCCCCCCCccceEEEEEEeeC--CEEEeCCC-----CccceeeCCCcccCCeEccCCCCCCCEEEEEecCCCcccccc
Confidence 99754 4568999999995 58998753 257999999 99999999 3457999999999999864
Q ss_pred CCCC-CCCccccccccEEEEEec--CC-CeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecC
Q 008189 336 FDDM-AKGWAGVQTIPREVWLDG--SG-KQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPS 411 (574)
Q Consensus 336 ~~~~-~~gW~g~lslPReL~l~~--~g-~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 411 (574)
.++. ..||+|||||||||+|++ +| .+|+|+|++||++||.+.+.+.+..+..+. +....+.+++|+++|+..
T Consensus 290 ~pt~~~~gW~g~~tlPRel~l~~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~---~~~~~~~~~el~~~~~~~- 365 (492)
T 4ffh_A 290 VPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVDGSA---VLPWNGRAYEIELDIAWD- 365 (492)
T ss_dssp CHHHHHHSEECCBCCCEEEEEEECTTSCEEEEEEECGGGGGGEEEEEEECCEEESSEE---ECSCCCSSEEEEEEEEES-
T ss_pred CCcccccCcccccccCEEEEEEEcCCCeeEEEEeehHHHHHhhccceeecceeccCce---eecCCCceEEEEEEEccC-
Confidence 2332 378999999999999994 33 379999999999999988776665553321 122234556776665431
Q ss_pred CCcccccCCCcccccccccccccCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCcc
Q 008189 412 LDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLY 491 (574)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~ 491 (574)
....+||.|+.+++ +.+.|.||... +. +++||++|+.. . .
T Consensus 366 -----------------------------~~~~~gl~l~~~~~--~~~~i~yd~~~---~~---l~ldR~~sg~~-~-~- 405 (492)
T 4ffh_A 366 -----------------------------TATNVGISVGRSPD--GTRHTNIGKYG---AD---LYVDRGPSDLA-G-Y- 405 (492)
T ss_dssp -----------------------------SCSEEEEEEEECTT--SSCCEEEEEET---TE---EEEECGGGCCT-T-S-
T ss_pred -----------------------------CccEEEEEEEECCC--CeEEEEEECcC---CE---EEEEccCCCCc-c-c-
Confidence 01368999988765 35789998763 22 56799988753 1 1
Q ss_pred ccccceEE--EEecCCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCCC
Q 008189 492 KPSFAGFV--NVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569 (574)
Q Consensus 492 ~~~~~~~~--~~~~~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~~ 569 (574)
...+...+ ++.+.++.++||||||+|+||||+||||.|||+||||... ..+|.++++| +.++|.++++|+|+++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~L~I~vD~SsvEvFvndG~~v~T~rifp~~~---~~~i~~~a~g-g~~~~~~l~v~~l~~~ 481 (492)
T 4ffh_A 406 SLAPYSRAAAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVHFAEG---DTGISLYTDG-GPAHFTGIVVREIGQA 481 (492)
T ss_dssp CCTTCCEEEEECCTTCCEEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEES-SCEEEEEEEEEEECCC
T ss_pred cccCCceEEEEecCCCCcEEEEEEEeCCEEEEEECCCEEEEEEEEeCCCC---CCeEEEEEcC-CeEEEEEEEEEeCchh
Confidence 11222222 3333468899999999999999999999999999999875 3455556555 3688999999999987
Q ss_pred c
Q 008189 570 V 570 (574)
Q Consensus 570 ~ 570 (574)
.
T Consensus 482 ~ 482 (492)
T 4ffh_A 482 I 482 (492)
T ss_dssp -
T ss_pred h
Confidence 4
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-93 Score=788.50 Aligned_cols=475 Identities=18% Similarity=0.268 Sum_probs=362.4
Q ss_pred cCCCccccchhhhccCcccccceeecCCCcee---eeEE--ECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceec--
Q 008189 30 KIYPEFQSLAAVKVKQLHRTAFHFQPPKHWIN---GPMY--YKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEAL-- 102 (574)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~RP~~H~~p~~gw~N---g~~~--~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~-- 102 (574)
+++.+|.++.++...++|||+|||+|+.|||| |++| ++|+|||||||+|.+ ||||+|+|||||+++
T Consensus 9 ~~~~~l~~~~~~~~~~~~Rp~~H~~p~~gwmNDPnG~~yD~~~G~YHlFYQ~~P~g-------WgHa~S~DLvhW~~~~~ 81 (634)
T 3lig_A 9 PPPTNLSTLPNNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG-------IAGATTANLATYTDTSD 81 (634)
T ss_dssp CCCSCGGGSCTTTTTTTSCCSSSCCCSSEEEEEECCCEECTTTCCEEEEEEETTSC-------EEEEEESSSSCCEESCS
T ss_pred CCHHHHHHhhhcccccccCccEeEcCCCCcccCCccceEeCCCCEEEEEEecCCCc-------eeEEEecCcCceeECcC
Confidence 34449999999999999999999999999999 9999 899999999999953 999999999999999
Q ss_pred --ccccCCCCCccCCCeEeeeEEEc-CCCeeEEEEeeecC----------CCcceEEEEEecCCCCcccceeeccCCCce
Q 008189 103 --EPALYPSKPFDINGCWSGSATVL-PGNKPIILYTGVDH----------KERQVQNYAVPANPSDPYLRKWIKPDNNPV 169 (574)
Q Consensus 103 --~~al~P~~~~D~~gv~SGsav~~-~dg~~~l~YTg~~~----------~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pv 169 (574)
|+||.|+..+|.+|||||||+++ .+|+++|||||+.+ .+.|.|++|+|+|.+ ++|+|++.|||
T Consensus 82 ~~~~aL~P~~~~D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~g----~~w~K~~~nPV 157 (634)
T 3lig_A 82 NGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDGG----RRFDKLDQGPV 157 (634)
T ss_dssp TTCEEECSCSSSCSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGGG----TEEEECSSSCS
T ss_pred CCCceecCCCCCCCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCCC----CEEEECCCCce
Confidence 89999999999999999999864 27899999999853 246899999998853 89999988999
Q ss_pred Ee-cCCCCCCcCccCCeeEE----------------------------ecCCCeEEEEEeeec-CCeeEEEEEE--eCC-
Q 008189 170 VF-PGPDVNASAFRDPTTAW----------------------------WSNDGHWRMLVGSRR-KHRGMAYLYR--SRD- 216 (574)
Q Consensus 170 i~-~~~~~~~~~fRDP~Vvw----------------------------~~~~g~~~M~~g~~~-~~~G~i~ly~--S~D- 216 (574)
|. +|.++...+||||||+| .+.+|+|||++|++. +..|+|+||+ |+|
T Consensus 158 i~~~p~g~~~~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~lY~~~s~dd 237 (634)
T 3lig_A 158 IADHPFAVDVTAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNA 237 (634)
T ss_dssp BCSSSTTCCEEEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEEEEEGGGCT
T ss_pred EcCCCcccCCCccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEEEEeCCCCc
Confidence 96 45666778999999876 225789999999987 5678999999 788
Q ss_pred --CCCCEEccccccc-------------CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC----------
Q 008189 217 --FMKWTKAKHPIHS-------------LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL---------- 271 (574)
Q Consensus 217 --l~~W~~~~~~l~~-------------~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~---------- 271 (574)
|.+|++.+.++.. +..++||||||||+|+.+|.. ....+|||++|+++
T Consensus 238 ~~l~~W~~~g~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~-------~~~~~~vl~~~~~g~~~~~~~~~~ 310 (634)
T 3lig_A 238 SEFQYWEYLGEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHD-------PQTGEVFVTLGTEGSGLPIVPQVS 310 (634)
T ss_dssp TCCSCEEEEEEEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBC-------TTTSEEEEEEEEEECCSSCCTTCC
T ss_pred cccCCceEecccccccccccccccccccCceeeEEECCCEEEECCcccC-------CCCCcEEEEECCCCCCCccccccc
Confidence 9999999865321 124679999999999954310 01358999999743
Q ss_pred -CceeEEEEEEEe--CC----CCccccCCCCCCCCcceecccCC-CccceeeeeCC----------C-CcEEEEEeccCC
Q 008189 272 -TRYDYYTIGTYN--RD----KDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSR----------K-NRRILWGWANES 332 (574)
Q Consensus 272 -~~~~~Y~vG~~d--~~----~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~----------~-gr~i~~gW~~~~ 332 (574)
.+.+.|++|+|+ +. +.+|.|+. +++||+|+ |||+|||.++. + |||||||||++|
T Consensus 311 ~~~~~~y~~G~~~~d~~~~~~~~~f~~~~-------~~~lD~G~dfYA~qtf~~~~~~~~~~~~~~~~gRri~igWm~~~ 383 (634)
T 3lig_A 311 SIHDMLWAAGEVGVGSEQEGAKVEFSPSM-------AGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVSFVWLTGD 383 (634)
T ss_dssp CEEEEEEEEEEEEECTTSSSCSEEEEEEE-------EEEEECCTTEEEEEEEEECTTSHHHHHHTCCSCEEEEEEEECSS
T ss_pred cccccEEEEEEEecCcccccCceeEecCC-------ccccccCcCceecceecccccccccccccCCCCCEEEEEeCCCC
Confidence 135789999994 43 35777653 57899999 99999999863 2 999999999999
Q ss_pred CCC----CCCCCCCccccccccEEEEEec-----CC----------------------CeEEEcchHHH-HhhhcCcee-
Q 008189 333 DST----FDDMAKGWAGVQTIPREVWLDG-----SG----------------------KQLLQWPIEEL-ETLRGKNVH- 379 (574)
Q Consensus 333 ~~~----~~~~~~gW~g~lslPReL~l~~-----~g----------------------~~L~q~Pv~el-~~Lr~~~~~- 379 (574)
++. .++.+.||+|||||||||+|++ +| .+|+|+|++|| ++||.....
T Consensus 384 ~~~~~~~~pt~~~gW~g~ltlPReL~l~~~~~v~~~~l~~~~~~s~~~~~~~~G~~t~~~L~q~Pv~El~~~Lr~~~~~~ 463 (634)
T 3lig_A 384 QYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVT 463 (634)
T ss_dssp TTTTCSSCCHHHHSEECEECCCEEEEEEEEEEEECSHHHHCSSCSCEEEEECSSEEEEEEEEEEECHHHHHHHHHTCEEE
T ss_pred cccccccCCCCCCCCccccccCEEEEEEEecCccCccccccccccceeccccCCccccCEEEEeecHHHHHHhhccceee
Confidence 865 3355689999999999999961 22 27999999999 889987643
Q ss_pred -eccceecCcceEEE-cccccceeEEEEEEEecCCCcccccCCCcccccccccccccCcccccCccceEEEEEecCCCce
Q 008189 380 -ISNQELKKGHHVEV-KGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGKIGSKVQGGVGPFGLLTLASKNLEE 457 (574)
Q Consensus 380 -~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~e 457 (574)
..+..+.....+.+ .+..+..++|+++|+.+.. .++...++||.|++++ ++
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~El~~~i~~~~~-------------------------~~~~a~~~Gl~L~~s~--~e 516 (634)
T 3lig_A 464 AEEDRTLQTAAVVPFAQSPSSKFFVLTAQLEFPAS-------------------------ARSSPLQSGFEILASE--LE 516 (634)
T ss_dssp EECCEEECSEEEEECSSCCSSSEEEEEEEEECCGG-------------------------GTTSCCEEEEEEEESS--SC
T ss_pred cccceeccccceecccccCCCcEEEEEEEEecCCC-------------------------CcCcccEEEEEEEeCC--Cc
Confidence 22233322112221 1234566777776654200 0011236899999875 47
Q ss_pred eEEEEEEEeeCCCceEEEEeecCCCCCccc---CCcc-ccccceEEEEecC------CCeEEEEEEEeCCeEEEEcCCCc
Q 008189 458 FTPVFFRIFKDGHKHLVLMCSDASSSTLKT---EGLY-KPSFAGFVNVDLS------DKKLSLRSLIDHSVVESFGAGGK 527 (574)
Q Consensus 458 ~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~---~~~~-~~~~~~~~~~~~~------~~~~~LrIfvD~S~vEvFvNdG~ 527 (574)
.|.|+||... +. +.+||++|+... ++.. .+..+..+.+++. .++++||||||+||||||||| |
T Consensus 517 ~T~I~Yd~~~---~~---l~vDRs~Sg~~~~~~~~~~~~~e~g~~R~~~~~~~~~~~~e~l~LrIfVD~SSVEVFvNd-e 589 (634)
T 3lig_A 517 RTAIYYQFSN---ES---LVVDRSQTSAAAPTNPGLDSFTESGKLRLFDVIENGQEQVETLDLTVVVDNAVVEVYANG-R 589 (634)
T ss_dssp CEEEEEETTT---TE---EEEECTTSCTTTTTCTTSCCCCEEEECCCCEEESSSSEEECCEEEEEEEETTEEEEEETT-T
T ss_pred EEEEEEECCC---CE---EEEECCCCCCcccccccccccccccceEEEeecCcccccCCceEEEEEEECCEEEEEECC-c
Confidence 8999998653 32 567999997530 0111 1122222222222 378999999999999999997 9
Q ss_pred eEEEEeeecC-CCcCCCceEEEEeCCceeEEEeEEeeecC
Q 008189 528 TCITSRVYPT-LAVFDDAHLYAFNNGTETVTVEKLNAWSM 566 (574)
Q Consensus 528 ~~lT~Riyp~-~~~~~~~~l~~~~~g~~~~~i~~l~~w~m 566 (574)
+|||+||||. .. ..+|+++++|+++++|.++++|+.
T Consensus 590 ~vmTsRIyP~~~~---s~gI~l~a~G~G~a~~~~l~vw~g 626 (634)
T 3lig_A 590 FALSTWARSWYDN---STQIRFFHNGEGEVQFRNVSVSEG 626 (634)
T ss_dssp EEEEEECCCCCTT---TTEEEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEEecCCCCC---CCcEEEEECCCccEEEEEEEEecC
Confidence 9999999998 54 456666666534789999999984
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-86 Score=715.14 Aligned_cols=417 Identities=28% Similarity=0.523 Sum_probs=336.9
Q ss_pred cccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeE
Q 008189 46 LHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSA 122 (574)
Q Consensus 46 ~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsa 122 (574)
.|||+|||+|+.|||| |++|++|+||||||++|.++.||+++||||+|+||+||+++|+||.|+.. .+|||||||
T Consensus 1 ~~Rp~~H~~p~~gw~nDPng~~~~~G~yhlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~~~aL~p~~~--~~g~~sgsa 78 (432)
T 1w2t_A 1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDE--THGVFSGSA 78 (432)
T ss_dssp CCSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSCCSCEEEEEEESSSSSCEEEEEEECCSST--TEEEEEEEE
T ss_pred CCCcCCcccCCCCCeECCCcCeEECCEEEEEEecCCCCCCCCCcEEEEEEcCCCcCeEECCccCCCCCC--CCCEEeeEE
Confidence 4899999999999999 89999999999999999999999999999999999999999999999876 579999999
Q ss_pred EEcCCCeeEEEEeeecC-----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEE
Q 008189 123 TVLPGNKPIILYTGVDH-----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRM 197 (574)
Q Consensus 123 v~~~dg~~~l~YTg~~~-----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M 197 (574)
++ .+|+++|||||+.. .+.+.|++|+|+|+ .+|+|++.+|||..+++....+||||+| |+ .+|+|||
T Consensus 79 v~-~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~V-f~-~dg~~~m 150 (432)
T 1w2t_A 79 VE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRM 150 (432)
T ss_dssp EE-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-CSSSEEE
T ss_pred EE-ECCEEEEEEecCccCCCCCCceEEEEEEEeCCC-----CeEEecCCCceEeCCCccccccccCCEE-EE-ECCEEEE
Confidence 88 59999999999864 24689999999985 6899987899996543323679999995 56 4899999
Q ss_pred EEeeec-CCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeE
Q 008189 198 LVGSRR-KHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDY 276 (574)
Q Consensus 198 ~~g~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~ 276 (574)
++|++. +..|+|.+|+|+||++|++.+.+..... ++|||||+||+++ | ||||++|.++...+.
T Consensus 151 ~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~-g~~~EcP~lf~~~--g-------------~~vL~~s~~g~~~~~ 214 (432)
T 1w2t_A 151 VLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDET-TKEIDCPDLVRIG--E-------------KDILIYSITSTNSVL 214 (432)
T ss_dssp EEEEEETTTEEEEEEEEESSSSSCEEEEEEEEETT-CSCCEEEEEEEET--T-------------EEEEEEEETTTTEEE
T ss_pred EEEEecCCCCcEEEEEECCCCCCceEccccccCCC-CCEEECCeEEEEC--C-------------EEEEEEeCCCCcceE
Confidence 999875 5678999999999999999886554433 6799999999997 5 999999998777899
Q ss_pred EEEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCC--CCCCCCCCccccccccEEE
Q 008189 277 YTIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDS--TFDDMAKGWAGVQTIPREV 353 (574)
Q Consensus 277 Y~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~--~~~~~~~gW~g~lslPReL 353 (574)
|++|+|| + ..|.++ .++++|+|+ |||||||.++ + |||+||||++|++ ..++.+.+|+|+|||||||
T Consensus 215 Y~~G~~d-~-~~~~~~-------~~~~lD~G~dfYA~qtf~~~-~-rri~~gW~~~~~~~~~~pt~~~gW~g~~tlPR~l 283 (432)
T 1w2t_A 215 FSMGELK-E-GKLNVE-------KRGLLDHGTDFYAAQTFFGT-D-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPREL 283 (432)
T ss_dssp EEEEEEE-T-TEEEEE-------EEEESCCSSSCEEEEECBSC-S-SEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEE
T ss_pred EEEEEec-C-CEEcCC-------ccceeccCCCccccceecCC-C-CEEEEEEecCcccccccCcccCCCcCceeccEEE
Confidence 9999999 5 455443 267999999 9999999986 5 9999999999987 4555568999999999999
Q ss_pred EEecCCCeEEEcchHHHHhhhcCceeeccceecCcceEEEcccccceeEEEEEEEecCCCcccccCCCcccccccccccc
Q 008189 354 WLDGSGKQLLQWPIEELETLRGKNVHISNQELKKGHHVEVKGVTAAQADVEVTFKLPSLDKAEKFDPSWKNLDAEHLCGK 433 (574)
Q Consensus 354 ~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (574)
+|+ +| +|+|+|++||++||.+.+.+.+ .+ ...+.+..+.+++++++|+.
T Consensus 284 ~l~-~g-~L~q~Pv~el~~lr~~~~~~~~-~~----~~~~~~~~~~~~e~~~~~~~------------------------ 332 (432)
T 1w2t_A 284 YVE-NN-ELKVKPVDELLALRKRKVFETA-KS----GTFLLDVKENSYEIVCEFSG------------------------ 332 (432)
T ss_dssp EEE-TT-EEEEEECGGGGGGEEEEEEEES-SC----EEEECCCSSSCEEEEEEEEE------------------------
T ss_pred EEe-CC-EEEEEEcHHHHHhhccceeccc-cc----eeEecCCCCeEEEEEEEEec------------------------
Confidence 997 67 7999999999999998765543 22 12344444555566554421
Q ss_pred cCcccccCccceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccceEEEEecC-CCeEEEEE
Q 008189 434 IGSKVQGGVGPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLS-DKKLSLRS 512 (574)
Q Consensus 434 ~~~~~~~~~~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~LrI 512 (574)
.|||.++.+ ++.|.|.|+ . +. +++||++|+.. .+..+.+++. ++.++|||
T Consensus 333 ----------~~~l~~~~~---~~~~~i~~~-~----~~---~~~dr~~~~~~--------~g~~~~~~~~~~~~~~l~i 383 (432)
T 1w2t_A 333 ----------EIELRMGNE---SEEVVITKS-R----DE---LIVDTTRSGVS--------GGEVRKSTVEDEATNRIRA 383 (432)
T ss_dssp ----------EEEEEEECS---SCEEEEEEE-T----TE---EEEECTTSSTT--------CCCEEEEECCCCSSEEEEE
T ss_pred ----------eEEEEEeCC---CCeEEEEEE-C----CE---EEEEcCCCCCC--------CCeEEEEEeCCCCeeEEEE
Confidence 378888542 367999998 2 22 57799887642 1222333332 46799999
Q ss_pred EEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCCC
Q 008189 513 LIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569 (574)
Q Consensus 513 fvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~~ 569 (574)
|||+|+||||+|||+ |||+|+||... ...|.+++++ .++++|+|++|
T Consensus 384 ~vD~s~vEvF~n~G~-~~t~r~yp~~~---~~~i~~~~~~------~~~~~~~l~~~ 430 (432)
T 1w2t_A 384 FLDSCSVEFFFNDSI-AFSFRIHPENV---YNILSVKSNQ------VKLEVFELENI 430 (432)
T ss_dssp EEETTEEEEEETTTE-EEEEECCCSSC---CCEEEEEEEE------EEEEEEEECCS
T ss_pred EEcCCEEEEEECCCE-EEEEEEeCCCC---CCeEEEEeCC------cEEEEEEchhh
Confidence 999999999999999 99999999875 2345544432 34688999987
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-30 Score=277.80 Aligned_cols=261 Identities=16% Similarity=0.140 Sum_probs=178.9
Q ss_pred ECCEEEEEEe-eCCCCCCCCccEEEEeecC----CcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC
Q 008189 66 YKGIYHLFYQ-YNPKGAVWGNIVWAHSVSK----DLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK 140 (574)
Q Consensus 66 ~~G~yHlfyq-~~P~~~~~g~~~Wgha~S~----Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 140 (574)
++|.+|+|++ ..|+ ++..||.|..++ ||+||+++|+++.|+.++ .|||||||++..+|+++|||||+...
T Consensus 144 ~~G~~vvf~L~~dP~---~~d~Hi~~~ys~~g~~DLvhW~~~G~~~~~~~~~--~g~WSGSAi~~~DG~l~LFYTG~~~~ 218 (571)
T 2yfr_A 144 WNGYQLVIGMMGVPN---VNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPV--IQQWSGSATLNKDGSIQLYYTKVDTS 218 (571)
T ss_dssp BTTEEEEEEEEECTT---SCCCEEEEEEEETTCCCGGGCEEEEETTCSCCTT--EEEEEEEEEECTTSCEEEEEEEEECT
T ss_pred ecCceEEEEEccCCC---CCCcEEEEEECcCCccccCCccCCCeEcCCCCCC--CceECCeeEECcCCEEEEEEeccccC
Confidence 5677789999 6666 578999999998 679999999999887433 79999999885699999999997642
Q ss_pred --CcceEEEEEe---------cCCCCcccceeeccCCCceEecCC--------------CCCCcCccCCeeEEecCCCeE
Q 008189 141 --ERQVQNYAVP---------ANPSDPYLRKWIKPDNNPVVFPGP--------------DVNASAFRDPTTAWWSNDGHW 195 (574)
Q Consensus 141 --~~~~q~lA~s---------~D~~d~~l~~w~k~~~~Pvi~~~~--------------~~~~~~fRDP~Vvw~~~~g~~ 195 (574)
+...|++|.. .|+ ..+..|++. .+|+.+++ +.+..+||||+| |++++|+|
T Consensus 219 ~~~~~~Q~Ia~a~~~l~~~~s~dg--v~~~kw~~~--~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP~V-f~d~dG~~ 293 (571)
T 2yfr_A 219 DNNTNHQKLASATVYLNLEKDQDK--ISIAHVDND--HIVFEGDGYHYQTYDQWKETNKGADNIAMRDAHV-IDDDNGNR 293 (571)
T ss_dssp TTTCCEEEEEEEEEEEEEEGGGTE--EEEEEEEEE--EEEECCCSSSBCCHHHHHHHCSSCCCCCCEEEEE-EECTTCCE
T ss_pred CCCcccceEEEEEeeeeecccCCC--cceecccCC--CceecCCCcccccccccccccccCCcccCcCCeE-EEeCCCCE
Confidence 2346666541 232 223455543 45554432 115689999995 66446999
Q ss_pred EEEEeeecCC------------------------------------------eeEEEEEEeCCC----CCCEEccccccc
Q 008189 196 RMLVGSRRKH------------------------------------------RGMAYLYRSRDF----MKWTKAKHPIHS 229 (574)
Q Consensus 196 ~M~~g~~~~~------------------------------------------~G~i~ly~S~Dl----~~W~~~~~~l~~ 229 (574)
||++|++... .|+|.||+|+|+ ..|++.++ |..
T Consensus 294 YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~~n~~~We~~~p-L~~ 372 (571)
T 2yfr_A 294 YLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSVAKVYSP-LIS 372 (571)
T ss_dssp EEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCTTSCCEEEECCC-SEE
T ss_pred EEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCcCCcccceeccc-ccc
Confidence 9999998532 489999999775 58999874 443
Q ss_pred C-CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCc-----------------eeEE-EEEEEeCCCCccc
Q 008189 230 L-ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTR-----------------YDYY-TIGTYNRDKDRYV 290 (574)
Q Consensus 230 ~-~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~-----------------~~~Y-~vG~~d~~~~~F~ 290 (574)
. ..+.|||||++|+++ | +|||++|....+ ...| ++++ .-.++|.
T Consensus 373 ~~~v~dm~EcP~lf~~d--G-------------~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~vSd--sl~GPy~ 435 (571)
T 2yfr_A 373 APMVSDEIERPDVVKLG--N-------------KYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVSD--NLTHGYV 435 (571)
T ss_dssp CTTTBSCCEEEEEEEET--T-------------EEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEEEES--SSSSCCE
T ss_pred CCCcCceeecCcEEEEC--C-------------EEEEEEeCCCCcccccccccccccCcCCceEEEEEEeC--CCCCCCe
Confidence 3 345699999999998 6 899999865311 2344 5553 2235777
Q ss_pred cCCCCC--CC---CcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCC
Q 008189 291 PDKDSV--DG---WRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGK 360 (574)
Q Consensus 291 ~~~~~~--d~---~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~ 360 (574)
|-++.. -+ .....++ +. +||..+..+ .+++++++||...... ...+|.|.|+-+..|.++.||.
T Consensus 436 plng~glVL~~~~P~~~~~~-tyS~Ya~p~~~~--~~~~lv~s~i~~r~~~---~~~~~~GTlap~~~vq~~~dgt 505 (571)
T 2yfr_A 436 PLNESGVVLTASVPANWRTA-TYSYYAVPVEGR--DDQLLITSYITNRGEV---AGKGMHATWAPSFLLQINPDNT 505 (571)
T ss_dssp ETTTTSEEEECCSCTTSTTC-EEEEEEEEETTE--EEEEEEEEEESCSTTT---TCTTCCCEECEEEEEEEETTTE
T ss_pred eCCCCceeecCCCCCccccc-cceeEEEecccC--CCcEEEEEEeCCcCCC---CCcccceeecCcEEEEEcCCCC
Confidence 632100 00 0001122 33 677766543 3578899999988743 3467999998776777877774
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-29 Score=265.83 Aligned_cols=271 Identities=16% Similarity=0.127 Sum_probs=184.9
Q ss_pred CCcee--eeEEE--------CCEEEEEEeeCCCCCCCCccEEEEeecC----CcCCceecccccCCC------CCc--cC
Q 008189 57 KHWIN--GPMYY--------KGIYHLFYQYNPKGAVWGNIVWAHSVSK----DLINWEALEPALYPS------KPF--DI 114 (574)
Q Consensus 57 ~gw~N--g~~~~--------~G~yHlfyq~~P~~~~~g~~~Wgha~S~----Dlv~W~~~~~al~P~------~~~--D~ 114 (574)
..|+. .++++ +|..++||+..+... ++..||+|+.|+ ||+||++.|.++.+. .++ +.
T Consensus 55 ~~~VWDsWpl~d~~G~~~~~~g~~lif~L~~dp~~-~~~~hi~~~ys~~g~~dl~~W~~~G~vfp~~~~~~~~~~~~~~~ 133 (447)
T 1oyg_A 55 GLDVWDSWPLQNADGTVANYHGYHIVFALAGDPKN-ADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQ 133 (447)
T ss_dssp TCEEEEEEEEECTTSSBCCBTTEEEEEEEEECTTC-TTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGC
T ss_pred CCcccccceEECCCCCEEEecCcEEEEEEcCCCCC-CCceEEEEEECcCCCcccCCccCCCeecCCCccccccccccCCC
Confidence 58888 55554 456669998765432 578999999999 569999999855443 344 36
Q ss_pred CCeEeeeEEEcCCCeeEEEEeeecCC--CcceEEEEE-----ecCCCCcccceeeccCCCceEecCCC------------
Q 008189 115 NGCWSGSATVLPGNKPIILYTGVDHK--ERQVQNYAV-----PANPSDPYLRKWIKPDNNPVVFPGPD------------ 175 (574)
Q Consensus 115 ~gv~SGsav~~~dg~~~l~YTg~~~~--~~~~q~lA~-----s~D~~d~~l~~w~k~~~~Pvi~~~~~------------ 175 (574)
.+||||||++..||+++|||||+... ..|+++.|. ++|+ ..+..|++. ++|+.+++.
T Consensus 134 ~g~WSGSAi~~~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dg--v~~~~~~~~--~~l~~~Dg~~Yq~~~q~~~~~ 209 (447)
T 1oyg_A 134 TQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSS--LNINGVEDY--KSIFDGDGKTYQNVQQFIDEG 209 (447)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSC--EEEEEEEEE--EEEECCCSSSBCCHHHHHHHT
T ss_pred CCEECCceEECcCCEEEEEEEeecCCCCCceEEEEEecceeecCCC--cceecccCC--CceEcCCCccccccccccccc
Confidence 89999999985699999999998653 234443333 3332 123455543 566654321
Q ss_pred ----CCCcCccCCeeEEecCCCeEEEEEeeecCC------------------------------------------eeEE
Q 008189 176 ----VNASAFRDPTTAWWSNDGHWRMLVGSRRKH------------------------------------------RGMA 209 (574)
Q Consensus 176 ----~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~------------------------------------------~G~i 209 (574)
.+..+||||+| |+ .+|+|||+++++... .|+|
T Consensus 210 ~~~~~~~~~fRDP~V-f~-d~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~I 287 (447)
T 1oyg_A 210 NYSSGDNHTLRDPHY-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGAL 287 (447)
T ss_dssp GGGGTCCCCCEEEEE-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEE
T ss_pred cccCCCccccCCCeE-Ee-ECCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEE
Confidence 13479999995 56 379999999998632 3799
Q ss_pred EEE-EeCCCCCCEEcccccccC-CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCc--------eeEEEE
Q 008189 210 YLY-RSRDFMKWTKAKHPIHSL-ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTR--------YDYYTI 279 (574)
Q Consensus 210 ~ly-~S~Dl~~W~~~~~~l~~~-~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~--------~~~Y~v 279 (574)
.|+ .|+|+.+|++.+ +|... ....+||||++|+++ | ||||++|..... ...|++
T Consensus 288 gl~~~s~Dl~~W~~~~-pL~~~~~v~d~~EcPdlfk~d--G-------------kyyLf~S~~~s~~~~~g~~~~~vy~~ 351 (447)
T 1oyg_A 288 GMIELNDDYTLKKVMK-PLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYML 351 (447)
T ss_dssp EEEEECTTSSEEEEEE-EEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEEE
T ss_pred EEEEcCCCCCCceEcc-ccccCCCCCCceEcCcEEEEC--C-------------EEEEEEecCCCcccccCcCCCcEEEE
Confidence 887 699999999976 45543 345689999999998 6 999999974322 247866
Q ss_pred EE-EeCCCCccccCCCC--CCC---CcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEE
Q 008189 280 GT-YNRDKDRYVPDKDS--VDG---WRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPRE 352 (574)
Q Consensus 280 G~-~d~~~~~F~~~~~~--~d~---~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPRe 352 (574)
|- -+.-.++|.|-+.. .-+ .....++ +. +||..+. + .+++++++||.+... ...|.|.|+-+..
T Consensus 352 g~vsdsl~GPy~plngsGlVl~~~~p~~~~~~-~ys~ya~p~~-~--~~~~~v~sf~~~~~~-----~~~~ggtlap~~~ 422 (447)
T 1oyg_A 352 GYVSNSLTGPYKPLNKTGLVLKMDLDPNDVTF-TYSHFAVPQA-K--GNNVVITSYMTNRGF-----YADKQSTFAPSFL 422 (447)
T ss_dssp EEEESSTTCCCEEGGGTSEEEEECCCTTCTTC-EEEEEEECCS-S--SSEEEEEEEESCTTS-----CSSCCCEECBCEE
T ss_pred EEEcCCCCCCCeeCCCCceeecCCCCCccccc-cceeEEEecC-C--CCeEEEEEEeCCCCc-----ccccceeecCcEE
Confidence 63 33334677762110 000 0011233 44 7888877 4 358999999998753 2469999998888
Q ss_pred EEEecCC
Q 008189 353 VWLDGSG 359 (574)
Q Consensus 353 L~l~~~g 359 (574)
|.++.++
T Consensus 423 v~~~gd~ 429 (447)
T 1oyg_A 423 LNIKGKK 429 (447)
T ss_dssp EEEETTE
T ss_pred EEEcCCc
Confidence 8887543
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=231.02 Aligned_cols=219 Identities=17% Similarity=0.201 Sum_probs=152.6
Q ss_pred cccchhhhccCcccccceeecCCCcee----------eeEEECCEEEEEEeeCCCCC--CCCc----cEEEEeecCC---
Q 008189 35 FQSLAAVKVKQLHRTAFHFQPPKHWIN----------GPMYYKGIYHLFYQYNPKGA--VWGN----IVWAHSVSKD--- 95 (574)
Q Consensus 35 ~~~~~~~~~~~~~RP~~H~~p~~gw~N----------g~~~~~G~yHlfyq~~P~~~--~~g~----~~Wgha~S~D--- 95 (574)
-.++|+......--+.+-.+.+..|+. .++.++|.||||||..|... .++. .++||+.|+|
T Consensus 47 ~~~~p~~~t~p~i~~~~~~~~~d~wVWDsWPl~D~dg~~v~~~G~~~vF~L~a~r~~~~~~~drH~~a~I~~~yskdg~~ 126 (493)
T 1w18_A 47 QNSLPAQLTMPNIPADFPVINPDVWVWDTWTLIDKHADQFSYNGWEVIFCLTADPNAGYGFDDRHVHARIGFFYRRAGIP 126 (493)
T ss_dssp SCCSCGGGBCCCCCTTCCCSCTTCEEEEEEEEECTTCCBEEETTEEEEEEEEECTTSSCCGGGCGGGCEEEEEEEESSCC
T ss_pred cccCchhhcCCccccCcccccCCcceEcCeeEECCCCCEEEECCeEEEEEEecCCccCCCccCCCccceeeeEEecCccc
Confidence 344555444443333444455889997 35667889999999998764 3443 4556999999
Q ss_pred ------cCCceecccccCCCCC--------ccCCCeEeeeEEEc--CCCeeEEEEeeecCC----C----cceEEEEEec
Q 008189 96 ------LINWEALEPALYPSKP--------FDINGCWSGSATVL--PGNKPIILYTGVDHK----E----RQVQNYAVPA 151 (574)
Q Consensus 96 ------lv~W~~~~~al~P~~~--------~D~~gv~SGsav~~--~dg~~~l~YTg~~~~----~----~~~q~lA~s~ 151 (574)
|+||++.+.+|.++.. ++..++|||||++. .||+++||||++... + ...|+||.+.
T Consensus 127 ~~~~~~l~~W~~~G~vf~~g~~~~~~~~~~~d~~~~WSGSAi~~~~~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~ 206 (493)
T 1w18_A 127 ASRRPVNGGWTYGGHLFPDGASAQVYAGQTYTNQAEWSGSSRLMQIHGNTVSVFYTDVAFNRDANANNITPPQAIITQTL 206 (493)
T ss_dssp GGGSCTTCCCEEEEESSCTTGGGGGSTTSCCSEEEEEEEEEEESSTTSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred cccccccCCceECCccccCCCccccccccccCcCCeEcCceEEeccCCCEEEEEEEecccccccccccCCcceeEEEEec
Confidence 7999999999866543 45578999999985 699999999998531 1 1257776332
Q ss_pred -----CCCCcccceeeccCCCceEecCC-CC------CCcCccCCeeEEecC-CCeEEEEEeeecC--------------
Q 008189 152 -----NPSDPYLRKWIKPDNNPVVFPGP-DV------NASAFRDPTTAWWSN-DGHWRMLVGSRRK-------------- 204 (574)
Q Consensus 152 -----D~~d~~l~~w~k~~~~Pvi~~~~-~~------~~~~fRDP~Vvw~~~-~g~~~M~~g~~~~-------------- 204 (574)
+..+..+.+|+|. ++|+.++. .| ...+||||+|+.++. +|+|||++++...
T Consensus 207 ~~l~a~~dgv~~~~w~k~--~~l~~~DG~~Yqt~~q~~~~~fRDP~vf~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~ 284 (493)
T 1w18_A 207 GRIHADFNHVWFTGFTAH--TPLLQPDGVLYQNGAQNEFFNFRDPFTFEDPKHPGVNYMVFEGNTAGQRGVANCTEADLG 284 (493)
T ss_dssp EEEEECSSCEEEEEEEEE--EEEECCCSSSBCCTTTCTTCCCEEEEEEECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHC
T ss_pred cceeccCCCccccccccC--CceeecCccccccccccCCccccCCEEEecCCCCCCEEEEEEeccCCCCccccccccccc
Confidence 2212346789885 56775432 12 247999999654432 4999999998652
Q ss_pred ---------------------CeeEEEEEEe--CCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCc
Q 008189 205 ---------------------HRGMAYLYRS--RDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNE 261 (574)
Q Consensus 205 ---------------------~~G~i~ly~S--~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~ 261 (574)
..|+|.|+++ +||..|++...++.......++|||++|+++ |
T Consensus 285 y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~Dl~~We~~~PL~~a~~v~deiErP~V~~~~--G------------- 349 (493)
T 1w18_A 285 FRPNDPNAETLQEVLDSGAYYQKANIGLAIATDSTLSKWKFLSPLISANCVNDQTERPQVYLHN--G------------- 349 (493)
T ss_dssp CCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESSTTSCCEEEEEEEEECTTTBSCCEEEEEEEET--T-------------
T ss_pred ccCCccccchhhhcccccchhccceEEEEEeCCCCCccceecCccccCCCCCCcEECCeEEEEC--C-------------
Confidence 1467866664 6899999876433434445799999999998 6
Q ss_pred eEEEEEeec
Q 008189 262 KFVLKVSLD 270 (574)
Q Consensus 262 k~vl~~s~~ 270 (574)
||+|++|..
T Consensus 350 kyYLFtSs~ 358 (493)
T 1w18_A 350 KYYIFTISH 358 (493)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEcc
Confidence 999998854
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=223.01 Aligned_cols=188 Identities=16% Similarity=0.194 Sum_probs=148.0
Q ss_pred CCcee-eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceec-ccccCCC--CCccCCCe-EeeeEEEcCCCeeE
Q 008189 57 KHWIN-GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEAL-EPALYPS--KPFDINGC-WSGSATVLPGNKPI 131 (574)
Q Consensus 57 ~gw~N-g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~-~~al~P~--~~~D~~gv-~SGsav~~~dg~~~ 131 (574)
.|.+| ++++++|+||||||+++. ++.++|+||+|+|++||++. +++|.|+ ..++..|| |+++++.. +|+++
T Consensus 54 ~gv~n~~~i~~~g~~~lfY~~~~~---~~~~~~~~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~g~~yDP~v~~~-~d~yy 129 (338)
T 1vkd_A 54 ARVFNSAVVPYNGEFVGVFRIDHK---NTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTYY 129 (338)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEET---TSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTEEE
T ss_pred CeEEccEEEEECCEEEEEEEEECC---CCcEEEEEEEeCCCCccEECCCCEEeCCCCCccccCCEEeCcEEEEE-CCEEE
Confidence 57778 999999999999999985 46799999999999999987 5788888 67788999 89999874 88999
Q ss_pred EEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec-CCCeEEEEEeeec---CCee
Q 008189 132 ILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS-NDGHWRMLVGSRR---KHRG 207 (574)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~-~~g~~~M~~g~~~---~~~G 207 (574)
|+||+ .. ..+.+++|.|+|. ++|+|. ++++. ...|||. +|.+ .+|+|+|+++.+. ...|
T Consensus 130 m~yt~-~~-~~~~i~la~S~Dl-----~~W~~~--~~i~~-------~~~rd~~-~fp~~i~Gky~m~~~~q~~~~~~~~ 192 (338)
T 1vkd_A 130 ITFCT-DD-HGPTIGVGMTKDF-----KTFVRL--PNAYV-------PFNRNGV-LFPRKINGKYVMLNRPSDNGHTPFG 192 (338)
T ss_dssp EEEEE-ES-SSEEEEEEEESSS-----SSEEEE--CCSSS-------SSEEEEE-ECSSCBTTBEEEEEEECCSSSCSCC
T ss_pred EEEEE-cC-CcceEEEEEECCC-----CeEEEC--CccCC-------CcCCceE-EEEEEECCEEEEEEEecCCCCCCCc
Confidence 99999 64 5678999999885 899985 34432 1469997 5654 3899999998763 3567
Q ss_pred EEEEEEeCCCCCCEEcccccccCCCCCccc------cceeEEeccCCCCccccccCCCCceEEEEEeecC--CceeEEEE
Q 008189 208 MAYLYRSRDFMKWTKAKHPIHSLANTGMWE------CPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL--TRYDYYTI 279 (574)
Q Consensus 208 ~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wE------cPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~--~~~~~Y~v 279 (574)
.|.+++|+||.+|+..+ ++..+..+.||| ||+.|+++ + .|+|+++... .....|.+
T Consensus 193 ~I~~a~S~Dl~~W~~~~-~l~~~~~~~~wE~~~ig~gp~~i~~~--~-------------gwll~y~G~~~~~~~~~Y~~ 256 (338)
T 1vkd_A 193 DIFLSESPDMIHWGNHR-FVLGRSSYNWWENLKIGAGPYPIETS--E-------------GWLLIYHGVTLTCNGYVYSF 256 (338)
T ss_dssp CEEEEEESSSSCBEEEE-EEECCCSSCGGGSSEEEECSCCEEET--T-------------EEEEEEEEEEEETTEEEEEE
T ss_pred EEEEEEcCCcccCCcCc-eEEcCCCCCCcccCccccCCCcEEeC--C-------------cEEEEEecccCCCCCcEEEE
Confidence 89999999999999765 444443444899 79999986 3 5888876321 12356877
Q ss_pred EE
Q 008189 280 GT 281 (574)
Q Consensus 280 G~ 281 (574)
|-
T Consensus 257 G~ 258 (338)
T 1vkd_A 257 GA 258 (338)
T ss_dssp EE
T ss_pred EE
Confidence 76
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=224.54 Aligned_cols=190 Identities=17% Similarity=0.236 Sum_probs=144.2
Q ss_pred ccCcccccc-eeecCCC--------cee---eeEEECCEEEEEEeeCCC-------------CCCCCccEEEEeecCCcC
Q 008189 43 VKQLHRTAF-HFQPPKH--------WIN---GPMYYKGIYHLFYQYNPK-------------GAVWGNIVWAHSVSKDLI 97 (574)
Q Consensus 43 ~~~~~RP~~-H~~p~~g--------w~N---g~~~~~G~yHlfyq~~P~-------------~~~~g~~~Wgha~S~Dlv 97 (574)
.+++|||.| |++|+.| ++| ++++++|+||||||+.|. ...|+.++|+||+|+||+
T Consensus 69 ~~~~~~~~~~~~~p~~g~~~~~~~v~~~DP~~vi~~dG~Yylfyt~~~~~~~G~~~~~~~~~~~p~~~~~i~~A~S~Dlv 148 (408)
T 3p2n_A 69 LGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDGW 148 (408)
T ss_dssp CCSTTCEEECCCEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSSS
T ss_pred cCCchhhcccccCCcCCCccccCCcEeCCCCEEEEECCEEEEEEEeCCCcccccccccccccccccccceEEEEEcCCCC
Confidence 578999999 9999999 777 799999999999998762 113568899999999999
Q ss_pred CceecccccCCCC--CccCCCeEeeeEEEcCCCeeEEEEeeecCC---C-cceEEEEEecCCCCcccceeeccCCCceEe
Q 008189 98 NWEALEPALYPSK--PFDINGCWSGSATVLPGNKPIILYTGVDHK---E-RQVQNYAVPANPSDPYLRKWIKPDNNPVVF 171 (574)
Q Consensus 98 ~W~~~~~al~P~~--~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~-~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~ 171 (574)
||++++.+|.|.. .||..+||+++++. .+|+++||||+.... + ...+++|++.+.. +. |++. ++||+.
T Consensus 149 ~W~~~g~~l~~~~~~~wd~~gv~aPsVi~-~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~D---G~-W~~~-~~pli~ 222 (408)
T 3p2n_A 149 TWKEEGPAVTRGEKGAYDDRSVFTVEIMK-WEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPD---GP-WTKS-EEPILS 222 (408)
T ss_dssp EEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCCEEEEEEESSTT---CC-CEEC-SSCSBC
T ss_pred eeeEeCceeCCCCCCCcccCceEeeEEEE-ECCEEEEEEEeecCCCCCcCCCceEEEEEECCC---CC-EEEC-CcceeC
Confidence 9999999998864 78889999999987 599999999997431 1 3456676664431 35 9997 578875
Q ss_pred cC------------------CCCCCcCccCCeeEEecCCCeEEEEEeeecCC--------eeEEEEEEeCCCC-CCEEcc
Q 008189 172 PG------------------PDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH--------RGMAYLYRSRDFM-KWTKAK 224 (574)
Q Consensus 172 ~~------------------~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~--------~G~i~ly~S~Dl~-~W~~~~ 224 (574)
+. ..++...+++|.|+ + .+|+|||++.+...+ .-++.+++|+|+. .|+...
T Consensus 223 ~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~-~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~Gpw~k~~ 300 (408)
T 3p2n_A 223 PADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCII-P-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKSP 300 (408)
T ss_dssp CCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEECT
T ss_pred CCCCceEEEecCCcccccccceecCCCeEcceEE-E-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCCCCcEECC
Confidence 42 34555568999965 4 589999999886421 1368899999986 899864
Q ss_pred -cccccCCCCCccccceeEEec
Q 008189 225 -HPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 225 -~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.|+.... .| |.+|+-+
T Consensus 301 ~nPVl~~~----~d-p~Vw~~~ 317 (408)
T 3p2n_A 301 YNPISNSG----HE-ICVWPYN 317 (408)
T ss_dssp TCCSCSSC----SS-CCEEEET
T ss_pred CCCcccCC----CC-CeeEecC
Confidence 3554322 22 6677654
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-22 Score=210.72 Aligned_cols=190 Identities=16% Similarity=0.278 Sum_probs=147.5
Q ss_pred ccCcccccceeecCCC--------cee---eeEEECCEEEEEEeeCCCCC-------------CCCccEEEEeecCCcCC
Q 008189 43 VKQLHRTAFHFQPPKH--------WIN---GPMYYKGIYHLFYQYNPKGA-------------VWGNIVWAHSVSKDLIN 98 (574)
Q Consensus 43 ~~~~~RP~~H~~p~~g--------w~N---g~~~~~G~yHlfyq~~P~~~-------------~~g~~~Wgha~S~Dlv~ 98 (574)
....++++||+.|..| |+| ++++++|+||||||++|... .|+.++|+||+|+||+|
T Consensus 25 ~~g~~f~~~~~~P~~g~~~~~e~~~~~DP~~v~~~dG~Yymfyt~~~~~~~G~~~~~~~~~~~~w~~~~i~~a~S~DLv~ 104 (374)
T 3r4z_A 25 KGPEWLFEFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKIT 104 (374)
T ss_dssp SCSTTCEEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSCSCTTSCSSTTTTCEEEEEEESSSSE
T ss_pred CCCchHHhcccccccCCccccCCcCcCCCCeEEEECCEEEEEEEcCCCcccccccccccccccccCccEEEEEECCCCcC
Confidence 4567999999999999 999 78899999999999986421 36788999999999999
Q ss_pred ceecccccCCCC--CccCCCeEeeeEEEcCCCeeEEEEeeecCC----CcceEEEEEecCCCCcccceeeccCCCceEec
Q 008189 99 WEALEPALYPSK--PFDINGCWSGSATVLPGNKPIILYTGVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP 172 (574)
Q Consensus 99 W~~~~~al~P~~--~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~ 172 (574)
|++++.+|.|.. .||..+||+|+++. .+|+++||||+.... ..+.+++|+|+|.. ..|++. ++||+.+
T Consensus 105 W~~~g~~l~~~~~~~~d~~gvwaPsvi~-~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~----Gpw~~~-~~Pvi~~ 178 (374)
T 3r4z_A 105 WKEIGPAIQRGAAGAYDDRAVFTPEVLR-HNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPF----GPWTKS-DAPILSP 178 (374)
T ss_dssp EEEEEEEECCCCTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCBEEEEEEESSTT----CCCEEC-SSCSBCC
T ss_pred cEeCcccCCCCCCCCccCCCEECCEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEECCCC----CCeEEC-CCCEeCC
Confidence 999999999864 78889999999987 499999999997642 34789999998863 589996 6899864
Q ss_pred CC------------------CCCCcCccCCeeEEecCCCeEEEEEeeecCC-----e---eEEEEEEeCCCC-CCEEcc-
Q 008189 173 GP------------------DVNASAFRDPTTAWWSNDGHWRMLVGSRRKH-----R---GMAYLYRSRDFM-KWTKAK- 224 (574)
Q Consensus 173 ~~------------------~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~-----~---G~i~ly~S~Dl~-~W~~~~- 224 (574)
.+ .++...++||+|+ + .+|+|||++++...+ . -++.+++|+++. .|+...
T Consensus 179 ~~~~~w~~ddd~~~~~~~~~~~d~~~~~~P~v~-~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~Gpw~~~~~ 256 (374)
T 3r4z_A 179 ENDGVWDTDEDNRFLVKEKGSFDSHKVHDPCLM-F-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKSEY 256 (374)
T ss_dssp CCCSEECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTTCCCEECTT
T ss_pred CcCCceeecCCceEEEecCCccccCccccceEE-E-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCCCCCEECCC
Confidence 32 1233457999964 5 589999999876421 1 268899998854 698853
Q ss_pred cccccCCCCCccccceeEEec
Q 008189 225 HPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 225 ~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.|+.... .-|.+|+.+
T Consensus 257 ~Pi~~~~-----~dp~V~~~~ 272 (374)
T 3r4z_A 257 NPITNSG-----HEVAVWPYK 272 (374)
T ss_dssp CCCCSSC-----SSCCEEEET
T ss_pred CCEeCCC-----CCCceEEeC
Confidence 4554321 136677765
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-21 Score=207.00 Aligned_cols=190 Identities=17% Similarity=0.255 Sum_probs=145.3
Q ss_pred ccCcccccceeecCCC-------ce-e---eeEEECCEEEEEEeeCCCCC-------------CCCccEEEEeecCCcCC
Q 008189 43 VKQLHRTAFHFQPPKH-------WI-N---GPMYYKGIYHLFYQYNPKGA-------------VWGNIVWAHSVSKDLIN 98 (574)
Q Consensus 43 ~~~~~RP~~H~~p~~g-------w~-N---g~~~~~G~yHlfyq~~P~~~-------------~~g~~~Wgha~S~Dlv~ 98 (574)
....++++||..|..| |+ | ++++++|+||||||++|... .|+.++|+||+|+||+|
T Consensus 65 ~~~~~f~r~~~~Pi~g~~~~~~g~~~~DP~~v~~~dG~yymfY~~~~~~~~G~~~~~~~~~~~~~~~~~i~~a~S~Dlv~ 144 (404)
T 4ak5_A 65 HDNKWFFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGLT 144 (404)
T ss_dssp CCSTTCCEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSSSE
T ss_pred CCCchhhhcccccccCCcccccceeecCCcEEEEECCEEEEEEEeCCCcccccccccccccccccCccEEEEEECCCCCC
Confidence 4567899999887777 87 7 78999999999999998411 36789999999999999
Q ss_pred ceecccccCCC--CCccCCCeEeeeEEEcCCCeeEEEEeeecCC----CcceEEEEEecCCCCcccceeeccCCCceEec
Q 008189 99 WEALEPALYPS--KPFDINGCWSGSATVLPGNKPIILYTGVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP 172 (574)
Q Consensus 99 W~~~~~al~P~--~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~ 172 (574)
|++++.+|.|. ..||..+||+++++. .+|+++||||+.... ..+.+++|+|++.. ..|++. ++|||.+
T Consensus 145 W~~~g~~L~~~~~~~wd~~gv~aP~Vi~-~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~----Gpwt~~-~~Pvl~~ 218 (404)
T 4ak5_A 145 WKEQGIAVKRGEKGAYDDRSVFTPEVME-WKGKYYLCYQAVKSPYTVRVKNTIGMACADSPE----GLWTKT-DKPVLEP 218 (404)
T ss_dssp EEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSCCCTTCCCEEEEEEESSTT----CCCEEC-SSCSBCC
T ss_pred ceeCceEeecCCCCccccCCEEeeEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEEeCCC----CCceEC-CCceecC
Confidence 99999999985 478889999999987 499999999997642 34678999998743 369985 6899864
Q ss_pred CC------------------CCCCcCccCCeeEEecCCCeEEEEEeeecCC--------eeEEEEEEeCCCC-CCEEcc-
Q 008189 173 GP------------------DVNASAFRDPTTAWWSNDGHWRMLVGSRRKH--------RGMAYLYRSRDFM-KWTKAK- 224 (574)
Q Consensus 173 ~~------------------~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~--------~G~i~ly~S~Dl~-~W~~~~- 224 (574)
.+ .++...++||.|+ + .+|+|||++.+.... ..++.++.|+|+. .|+...
T Consensus 219 ~~~~~W~~ddd~~~~~~~~~~wD~~~~~~P~v~-~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~Gpw~k~~~ 296 (404)
T 4ak5_A 219 SDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCII-P-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPMGPYVKSEY 296 (404)
T ss_dssp CSCCEECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEECTT
T ss_pred CCCcceeeccCceeeeccCCcccCCcEECCEEE-E-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCCCCcEECCC
Confidence 32 1234567899965 4 589999999876421 1368999999986 798753
Q ss_pred cccccCCCCCccccceeEEec
Q 008189 225 HPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 225 ~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.|+... ..|+ .+|+-+
T Consensus 297 nPv~~~----~~e~-~Vw~~~ 312 (404)
T 4ak5_A 297 NPISNS----GHEV-CVWPYK 312 (404)
T ss_dssp CCSCSS----CSSC-CEEEET
T ss_pred CceecC----CCcc-eEEEeC
Confidence 455432 1354 566554
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=206.35 Aligned_cols=154 Identities=18% Similarity=0.289 Sum_probs=119.6
Q ss_pred CCcee-eeEEECCEEEEEEeeCCCCCC---CCccEEEEeecCCcCCceec-ccccCCCCCccC-----CCeEeeeEEEcC
Q 008189 57 KHWIN-GPMYYKGIYHLFYQYNPKGAV---WGNIVWAHSVSKDLINWEAL-EPALYPSKPFDI-----NGCWSGSATVLP 126 (574)
Q Consensus 57 ~gw~N-g~~~~~G~yHlfyq~~P~~~~---~g~~~Wgha~S~Dlv~W~~~-~~al~P~~~~D~-----~gv~SGsav~~~ 126 (574)
.+-.| ++++++|+||||||+++.... ++.++||||+|+|++||++. .++|.|+..++. .||++++++..+
T Consensus 51 ~gvfnp~ai~~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DGi~w~~~~~Pvl~P~~~~~~~~e~~~gv~DP~v~~~e 130 (364)
T 3qc2_A 51 NDTFNPAATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGGCEDPRIAVTD 130 (364)
T ss_dssp SEEEEEEEEEETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECT
T ss_pred CceECceEEEECCEEEEEEEEECCCCcccCCCceEEEEEEeCCCceeeEcCcCeEcCCCccccccccCCcEECCEEEEeC
Confidence 35566 899999999999999988653 47899999999999999985 478999887653 799999998855
Q ss_pred CCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecC-C-CCCCcCccCCeeE--------E-ecCCCeE
Q 008189 127 GNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG-P-DVNASAFRDPTTA--------W-WSNDGHW 195 (574)
Q Consensus 127 dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~-~-~~~~~~fRDP~Vv--------w-~~~~g~~ 195 (574)
||+++|+||+... ..+.+++|+|+|. ++|+|. ++++.+. . .+.....+|+.++ + ...+|+|
T Consensus 131 dG~yym~Yta~~~-~~~~i~lA~S~Dl-----~~W~k~--g~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~ki~GkY 202 (364)
T 3qc2_A 131 DGLYVMMYTQWNR-HVPRLAVATSRNL-----KDWTKH--GPAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKY 202 (364)
T ss_dssp TSCEEEEEEEECS-SCEEEEEEEESSS-----SSCEEE--EETTSSHHHHTTTTCCCCCEEEEEEEETTEEEECEETTEE
T ss_pred CCEEEEEEEecCC-CCeEEEEEEECCC-----CEEEEe--eeccCccccccccccccccceeeeeccccceeeEEECCEE
Confidence 8999999999763 4678999999985 899996 4665431 0 1112234666532 1 1268999
Q ss_pred EEEEeeecCCeeEEEEEEeCCCCCCEEc
Q 008189 196 RMLVGSRRKHRGMAYLYRSRDFMKWTKA 223 (574)
Q Consensus 196 ~M~~g~~~~~~G~i~ly~S~Dl~~W~~~ 223 (574)
+|+++. +.|.+++|+||.+|+..
T Consensus 203 ~M~~g~-----~~I~la~S~Dl~~W~~~ 225 (364)
T 3qc2_A 203 FMYWGE-----EHVFAATSDDLIHWTPI 225 (364)
T ss_dssp EEEECS-----SSBEEEEESSSSSEEEC
T ss_pred EEEEcC-----CeEEEEeCCCcccceEc
Confidence 999862 46889999999999873
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=192.25 Aligned_cols=187 Identities=16% Similarity=0.195 Sum_probs=141.2
Q ss_pred Ccee--eeEEEC--CEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC--CccCCCeEeeeEEEcC---CC
Q 008189 58 HWIN--GPMYYK--GIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK--PFDINGCWSGSATVLP---GN 128 (574)
Q Consensus 58 gw~N--g~~~~~--G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~--~~D~~gv~SGsav~~~---dg 128 (574)
||++ .+++.+ |+||||+++.+. +.|+..+|.|++|+||+||+.++.+|.+.. .|+..++|+++++... +|
T Consensus 13 g~~~DP~i~~~~~dg~yyl~~t~~~~-~~~~~~~~~~~~S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~v~~~~~~~~G 91 (311)
T 3qz4_A 13 GFHADPEVLYSHQTKRYYIYPTSDGF-PGWGGSYFKVFSSKNLKTWKEETVILEMGKNVSWANGNAWAPCIEEKKIDGKY 91 (311)
T ss_dssp SSEEEEEEEEETTTTEEEEEEEECSS-GGGCCCEECCEEESSSSSCEECCCCEEBTTTBTTEEEEEEEEEEEEEEETTEE
T ss_pred CCcCCceEEEECCCCEEEEEEecCCC-CCCCCcEEEEEECCCCCCcEECceecccccCCCcccCCcCCCeeEEeeecCCC
Confidence 6777 667777 999999998765 457788899999999999999999997764 5666899999998742 89
Q ss_pred eeEEEEeeecCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecC-CCeEEEEEeeecCCe
Q 008189 129 KPIILYTGVDHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSN-DGHWRMLVGSRRKHR 206 (574)
Q Consensus 129 ~~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~-~g~~~M~~g~~~~~~ 206 (574)
+++||||+.... ..+.+++|+|+|.. ..|++. ++||+...+. ....++||.|++. + +|++||++|+
T Consensus 92 kyylyyt~~~~~~~~~~i~va~s~~p~----Gpw~~~-~~p~~~~~~~-g~~~~iDp~vf~d-d~dG~~yl~~g~----- 159 (311)
T 3qz4_A 92 KYFFYYSANPTTNKGKQIGVAVADSPT----GPFTDL-GKPIITSSPT-GRGQQIDVDVFTD-PVSGKSYLYWGN----- 159 (311)
T ss_dssp EEEEEEEEEETTCSSCEEEEEEESSTT----CCCEEC-SSCSBCSCTT-SSSBSCCCEEEEC-TTTCCEEEEECB-----
T ss_pred EEEEEEEeccCCCCCeeEEEEEECCCC----CCceEC-CcceEcCCCC-CCcccccccEEEE-CCCCcEEEEEcC-----
Confidence 999999997643 35788999998763 479884 6788854321 1357899996544 5 8999999986
Q ss_pred eEEEEEE-eCCCCCCEEcccccccCC-----CCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC
Q 008189 207 GMAYLYR-SRDFMKWTKAKHPIHSLA-----NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT 272 (574)
Q Consensus 207 G~i~ly~-S~Dl~~W~~~~~~l~~~~-----~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~ 272 (574)
+.|.+++ |+|+.+|......+..+. ...+.|||.+|+.+ | +++|++|....
T Consensus 160 ~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~ 216 (311)
T 3qz4_A 160 GYMAGAELNDDMLSIKEETTVVLTPKGGTLQTYAYREAPYVIYRK--G-------------IYYFFWSVDDT 216 (311)
T ss_dssp SSCEEEEBCTTSSSBCGGGCEECCCCCCCTTTTCCCEEEEEEEET--T-------------EEEEEEEESCT
T ss_pred CCEEEEEeCCcccccCCCceEEeCCCCCcccccceeeccEEEEEC--C-------------EEEEEEEcCCC
Confidence 3356677 888888864322232221 12479999999987 6 99999997643
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.9e-20 Score=191.66 Aligned_cols=149 Identities=20% Similarity=0.291 Sum_probs=115.5
Q ss_pred CCcee-eeEEECCEEEEEEeeCCCCCC---CCccEEEEeecCCcCCceec-ccccCCCCCcc-----CCCeEeeeEEEcC
Q 008189 57 KHWIN-GPMYYKGIYHLFYQYNPKGAV---WGNIVWAHSVSKDLINWEAL-EPALYPSKPFD-----INGCWSGSATVLP 126 (574)
Q Consensus 57 ~gw~N-g~~~~~G~yHlfyq~~P~~~~---~g~~~Wgha~S~Dlv~W~~~-~~al~P~~~~D-----~~gv~SGsav~~~ 126 (574)
.|-.| ++++++|+||||||.++.... ++.++|+||+|+|++||++. .++|.|+..++ ..+|++++++..+
T Consensus 48 ~gv~sgsai~~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~~~~~~~DP~v~~~~ 127 (356)
T 3taw_A 48 SDTFNPAATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENECPGGTEDPRIAMTE 127 (356)
T ss_dssp SEEEEEEEEEETTEEEEEEEEECSSSCSTTSSCEEECCEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECT
T ss_pred CCeECcEEEEECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCCccceECCcceecCCCccccccccCCceECCEEEEEC
Confidence 44555 888999999999999987642 36789999999999999985 57888887643 4799999998855
Q ss_pred CCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccC----------------CeeEEec
Q 008189 127 GNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRD----------------PTTAWWS 190 (574)
Q Consensus 127 dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRD----------------P~Vvw~~ 190 (574)
||+++|+||+... ....+++|.|+|. ++|++. ++++.+.. ..+||| |+ +++
T Consensus 128 dg~y~m~yt~~~~-~~~~i~la~S~Dl-----~~W~~~--g~i~~~~~---~~~~~~~~~k~~~l~p~~~~g~p~-v~k- 194 (356)
T 3taw_A 128 DGTYVLLYTQWNR-KVPRLAVATSKDL-----KHWTKF--GPAFEKAY---NGKFKDEATKSASLVTTLKGDKQV-IAK- 194 (356)
T ss_dssp TSCEEEEEEEECS-SCEEEEEEEESSS-----SSCEEE--EETTSSHH---HHTTTTSCCCCEEEEEEEETTEEE-ECC-
T ss_pred CCEEEEEEEEeCC-CCceEEEEECCCC-----CCceEe--eeEcCCcc---ccccccccCCccEEeecccCCCce-EEE-
Confidence 8999999999753 4578899999985 899986 46654321 123333 23 344
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEc
Q 008189 191 NDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKA 223 (574)
Q Consensus 191 ~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~ 223 (574)
.+|+|+|+++. +.|.+++|+||.+|+..
T Consensus 195 ~~G~y~m~~g~-----~~I~la~S~Dl~~W~~~ 222 (356)
T 3taw_A 195 VNGKYFMYWGE-----KNVYAATSDNLIDWDPL 222 (356)
T ss_dssp BTTBEEEEECS-----SSBEEEEESSSSSCEEC
T ss_pred ECCEEEEEeCC-----ceeeEEECCCcccCeec
Confidence 79999999972 45899999999999974
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-19 Score=183.11 Aligned_cols=193 Identities=15% Similarity=0.167 Sum_probs=142.4
Q ss_pred eeEEECCEEEEEEeeCCCC---CCCCccEEEEeecCCcCCceecccccCCC-CCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKG---AVWGNIVWAHSVSKDLINWEALEPALYPS-KPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~---~~~g~~~Wgha~S~Dlv~W~~~~~al~P~-~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.++.++|+||||+++.+.. +.+....|.+++|+||+||+.++.+|.+. ..|+..++|+++++. .+|+++||||+.
T Consensus 16 ~i~~~~g~yYl~~t~~~~~~~~~~~~~~~~~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~WAP~i~~-~~Gkyylyyt~~ 94 (307)
T 3qee_A 16 AALVHKGRVYLYAGRDEAPDNTTFFVMNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWASQVIE-RNGKFYWYVTVR 94 (307)
T ss_dssp EEEEETTEEEEEEEEECCSSSSSCCCEEEEEEEEESSSSSCEEEEEEEEGGGSTTEEEEEEEEEEEE-ETTEEEEEEEEE
T ss_pred ceEEECCEEEEEEccCcccCCccccccCcEEEEECCCCCCceECccccccCCCCcccCCccCceEEE-ECCEEEEEEEec
Confidence 5667899999999988753 45667889999999999999999998864 456678899999987 599999999998
Q ss_pred cCCC--cceEEEEEecCCCCcccceeeccCCCceEecC-C--CCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 008189 138 DHKE--RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG-P--DVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLY 212 (574)
Q Consensus 138 ~~~~--~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~-~--~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly 212 (574)
.... .+.+++|+|++.. -.|++..++|++... . .....+++||.|+ .+++|++||++|+. +....-
T Consensus 95 ~~~~~~~~~i~va~s~~p~----Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf-~DddG~~Yl~~g~~----~i~~~~ 165 (307)
T 3qee_A 95 HDDTKPGFAIGVAVGDSPI----GPFKDALGKALITNDMTTDTPIDWDDIDPSVF-IDDDGQAYLFWGNT----RPRYAK 165 (307)
T ss_dssp ECTTSCSEEEEEEEESSTT----CCCEESSSSCSBCGGGCCSSCCSCCSCCCEEE-ECTTSCEEEEECSS----SCEEEE
T ss_pred cCCCCCceEEEEEEECCCC----CCCEeCCCCeeEecCccccCCCCcCcccCceE-ECCCCCEEEEEeCC----cEEEEE
Confidence 6432 3688999998753 479985467888531 1 1112358999965 44689999999875 222223
Q ss_pred EeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEEEEEE
Q 008189 213 RSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281 (574)
Q Consensus 213 ~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 281 (574)
-|+|+.+|......+. ....++|||.+|+.+ | +++|++|........|...+
T Consensus 166 l~~d~~~~~g~~~~i~--~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~~~~~~~~s~ 217 (307)
T 3qee_A 166 LKKNMVELDGPIRAIE--GLPEFTEAIWVHKYQ--D-------------NYYLSYAMGFPEKIGYAMGK 217 (307)
T ss_dssp ECTTSSSEEEEEEECC--CCTTEEEEEEEEECC----------------CEEEEEEETTTTEEEEEEES
T ss_pred ECCccccccCceEEeC--CCCCccCceEEEEEC--C-------------EEEEEEECCCCcEEEEEECC
Confidence 3889988864322221 235689999999987 5 89999998655666676653
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=193.20 Aligned_cols=193 Identities=16% Similarity=0.096 Sum_probs=131.3
Q ss_pred eeEEECCEEEEEEeeCCCCC----CCCccEEEEe---------ecCCcCCceecccccCCCC--------CccCCCeEee
Q 008189 62 GPMYYKGIYHLFYQYNPKGA----VWGNIVWAHS---------VSKDLINWEALEPALYPSK--------PFDINGCWSG 120 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~----~~g~~~Wgha---------~S~Dlv~W~~~~~al~P~~--------~~D~~gv~SG 120 (574)
+++-++|..++|++..|... .|....+||. +|.|+.+|+..+.++.++. .++...-|||
T Consensus 86 ~~~~~~Gy~lvf~L~a~~~~~~~drH~~a~iglfy~k~G~~~~~s~d~~~W~~~G~vf~~~~~~~~~~~~~~~~~~eWSG 165 (496)
T 3vss_A 86 NQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSHQTQWSG 165 (496)
T ss_dssp CBEEETTEEEEEEEEEETTSCGGGGGGGCEEEEEEEESSCCTTTSCTTCCCEEEEESSCTTSGGGGCSCTTCSEEEEEEE
T ss_pred CEEEECCEEEEEEEEcCCCCCCCcCcceeEEeeeeccCCcccccCcccCCcEECccccCCCCCcccccCCCccCCceEec
Confidence 35567898889999765543 3455677884 5667789999988876542 2233346999
Q ss_pred eEEEcCCCeeEEEEeeecC--------CCcceEEEEEecCC--CCcccceeeccCCCceEecCCC--------CCCcCcc
Q 008189 121 SATVLPGNKPIILYTGVDH--------KERQVQNYAVPANP--SDPYLRKWIKPDNNPVVFPGPD--------VNASAFR 182 (574)
Q Consensus 121 sav~~~dg~~~l~YTg~~~--------~~~~~q~lA~s~D~--~d~~l~~w~k~~~~Pvi~~~~~--------~~~~~fR 182 (574)
||++.+||+++||||++.. ...+.|+||++... .++...+|++...+++|-.+.+ ....+||
T Consensus 166 SAi~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fR 245 (496)
T 3vss_A 166 SARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFR 245 (496)
T ss_dssp EEEECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCE
T ss_pred ceEECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccC
Confidence 9998889999999998742 12356777654310 0111267777666666632221 2346899
Q ss_pred CCeeEEec-CCCeEEEEEeeecC-----------------------------------CeeEEEEE--EeCCCCCCEEcc
Q 008189 183 DPTTAWWS-NDGHWRMLVGSRRK-----------------------------------HRGMAYLY--RSRDFMKWTKAK 224 (574)
Q Consensus 183 DP~Vvw~~-~~g~~~M~~g~~~~-----------------------------------~~G~i~ly--~S~Dl~~W~~~~ 224 (574)
||+|+++. .+|.+||++.+... ..|+|.|+ +|+|+..|++.+
T Consensus 246 DP~vf~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~D~~~We~~~ 325 (496)
T 3vss_A 246 DPFTFEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLTEWEFLP 325 (496)
T ss_dssp EEEEECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESSTTSCCEEEEE
T ss_pred CCeeEecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCCCCCccEEeC
Confidence 99965432 47889999866431 14777665 589999999987
Q ss_pred cccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 225 HPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 225 ~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
+++.+.....|||||++|+++ | ||||+.+.
T Consensus 326 PL~~a~~v~deiErP~vf~~d--G-------------KyYLFt~s 355 (496)
T 3vss_A 326 PILSANCVTDQTERPQIYFKD--G-------------KSYLFTIS 355 (496)
T ss_dssp EEEEEETTBSCCEEEEEEEET--T-------------EEEEEEEE
T ss_pred ccccCCCCCCceeCCcEEEEC--C-------------EEEEEEec
Confidence 444333456799999999998 6 99998875
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=170.69 Aligned_cols=178 Identities=18% Similarity=0.138 Sum_probs=128.8
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCcc-------CCCeEeeeEEEcCCCeeEEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFD-------INGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D-------~~gv~SGsav~~~dg~~~l~Y 134 (574)
.+++++|+||||++..+. ..+|.+++|+||+||+.++.+|.+...|+ ..++|+++++. .+|+++|||
T Consensus 16 ~i~~~~g~yYl~~t~~~~-----~~~i~i~~S~DLv~W~~~g~~l~~~~~w~~~~~~~~~~~~wAP~v~~-~~G~yylyy 89 (293)
T 1uv4_A 16 TMIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNGKYWLYY 89 (293)
T ss_dssp EEEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETTEEEEEE
T ss_pred eEEEECCEEEEEEcCCCC-----CCceEEEECCCCCCccCCCccCCCCCcccccccccCCCceecceEEE-ECCEEEEEE
Confidence 466789999999998763 34799999999999999999998875553 36899999987 499999999
Q ss_pred eeecCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE
Q 008189 135 TGVDHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR 213 (574)
Q Consensus 135 Tg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~ 213 (574)
|+.... ..+.+++|+|+|.. --.|++. +++|..++. ....++||.|+++ ++|++||++++.. +.|.+++
T Consensus 90 t~~~~~~~~~~i~va~s~~p~---~Gpw~~~--~~~l~~~~~-~~~~~iDp~vf~d-~dG~~Yl~~g~~~---~~i~~~~ 159 (293)
T 1uv4_A 90 SVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELTFD-KDGNPWLAFGSFW---SGIKLTK 159 (293)
T ss_dssp EECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEEEC-TTSCEEEEECBST---TCEEEEE
T ss_pred EecCCCCCcceEEEEECCCCC---CCCCccC--CccEecCCC-CCCCCCCCCeEEC-CCCCEEEEEEecC---CCEEEEE
Confidence 987542 35678899998752 0279885 355543221 1357899996544 6899999998642 2366666
Q ss_pred -eCCCCCCEEcccccc-cCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 214 -SRDFMKWTKAKHPIH-SLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 214 -S~Dl~~W~~~~~~l~-~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
++|+..+.-....+. .+....++|||.+|+.+ | +++|++|..
T Consensus 160 l~~d~~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~yyL~~s~~ 203 (293)
T 1uv4_A 160 LDKSTMKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFD 203 (293)
T ss_dssp ECTTTCSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEE
T ss_pred ECchhCccCCcceEEeecCCCCCccCccEEEEEC--C-------------EEEEEEEeC
Confidence 667765532111122 22245689999999997 6 899999874
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-18 Score=175.95 Aligned_cols=191 Identities=16% Similarity=0.174 Sum_probs=138.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEE-cCCCeeEEEEeeecCC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATV-LPGNKPIILYTGVDHK 140 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~-~~dg~~~l~YTg~~~~ 140 (574)
.++.++|+||||++..+. ...+|.+++|+||+||+.++.+|.+...|+..++|+++++. ..+|+++||||+.
T Consensus 28 ~i~~~~g~yyl~~t~~~~----~~~~i~~~~S~DLv~W~~~g~~l~~~~~~~~~~~wAP~v~~~~~~g~~yl~yt~~--- 100 (306)
T 3kst_A 28 YVMFYNNKYYAYGTGGTT----AGEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLFYSAE--- 100 (306)
T ss_dssp EEEEETTEEEEEEESCCS----SSSEEEEEEESSSSEEEEEEEEEEGGGSSCSSCCEEEEEEEETTTTEEEEEEEET---
T ss_pred EEEEECCEEEEEEecCCc----CCCCEEEEEeCCccccEECceecCCCCcccccccccCeEEEECCCCEEEEEEECC---
Confidence 467789999999997753 23479999999999999999999887777778999999864 3489999999985
Q ss_pred CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE-eCCCCC
Q 008189 141 ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR-SRDFMK 219 (574)
Q Consensus 141 ~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~-S~Dl~~ 219 (574)
+.+++|+|++.. -.|++....|++. ...+||.|+ .+++|++||+++...++. .|.+.+ |+|+.+
T Consensus 101 --~~i~va~s~~p~----Gpw~~~~~~p~~~-------~~~iDp~vf-~D~dG~~Yl~~~~~~~g~-~i~~~~ls~d~~~ 165 (306)
T 3kst_A 101 --EHICVATSTTPE----GPFRQEVKQPIWS-------EKSIDTSLF-IDDDGTPYLYFVRFTDGN-VIWVAQMTDDLMS 165 (306)
T ss_dssp --TEEEEEEESSTT----CCCBCSSCCCSSS-------SCCEEEEEE-ECTTSCEEEEEEEESSSE-EEEEEEBCTTSSC
T ss_pred --CcEEEEEcCCCC----CCcEeCCCccccC-------CCcccceEE-EeCCCCEEEEEEEeCCCC-EEEEEEeCccccc
Confidence 368899998763 4688765456653 467999965 446899999998654333 355555 899999
Q ss_pred CEEcccc-cccC------CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC----ceeEEEEEEEeCCCCc
Q 008189 220 WTKAKHP-IHSL------ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT----RYDYYTIGTYNRDKDR 288 (574)
Q Consensus 220 W~~~~~~-l~~~------~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~----~~~~Y~vG~~d~~~~~ 288 (574)
|...... +... ....++|||.+++.+ | +++|++|.... ....|+..+ ...++
T Consensus 166 ~~~~~~~~~~~~~~~w~~~~~~~~EgP~i~k~~--G-------------~YYL~~S~~~~~~~~y~v~~a~S~--s~~GP 228 (306)
T 3kst_A 166 IKTETLNQCIKAEVSWELLQGKVAEGPSLLKKN--G-------------VYYLIYSANHYENKGYGVGYATSD--TPMGP 228 (306)
T ss_dssp BCGGGCEEEECCCSGGGCSSSSBEEEEEEEEET--T-------------EEEEEEEESCTTSTTCEEEEEEES--STTCC
T ss_pred ccCcceeeeccCCccceecCCCceecceEEEEC--C-------------EEEEEEEeCCCCCCCceEEEEEeC--CCCCC
Confidence 8643211 1111 125689999999987 6 99999987542 233444443 22346
Q ss_pred ccc
Q 008189 289 YVP 291 (574)
Q Consensus 289 F~~ 291 (574)
|+.
T Consensus 229 w~~ 231 (306)
T 3kst_A 229 WVK 231 (306)
T ss_dssp CEE
T ss_pred CEe
Confidence 654
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=173.09 Aligned_cols=177 Identities=16% Similarity=0.150 Sum_probs=127.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCcc-------CCCeEeeeEEEcCCCeeEEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFD-------INGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D-------~~gv~SGsav~~~dg~~~l~Y 134 (574)
.+++++|+||||++. .+|.|++|+||+||+.++.||.+...|+ ..++|+++++. .+|+++|||
T Consensus 11 ~i~~~~g~yyl~~t~---------~~i~~~~S~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~~ylyy 80 (318)
T 1gyh_A 11 VMTREGDTWYLFSTG---------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKGLFYLYY 80 (318)
T ss_dssp EEEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETTEEEEEE
T ss_pred EEEEECCEEEEEECC---------CCcEEEECCCCCCccCCCcccCCCcccccccCCCcCcccccCeEEE-ECCEEEEEE
Confidence 567889999999987 2599999999999999999998876665 47899999987 499999999
Q ss_pred eeecCC-CcceEEEEEecCCCCccc--ceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEE
Q 008189 135 TGVDHK-ERQVQNYAVPANPSDPYL--RKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYL 211 (574)
Q Consensus 135 Tg~~~~-~~~~q~lA~s~D~~d~~l--~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~l 211 (574)
|+.... ..+.+++|+|++. |+.. ..|++. ++|+...+......++||.|+++ ++|++||++|+.. +.|.+
T Consensus 81 t~~~~~~~~~~igva~s~~~-dp~gp~~~w~~~--~~v~~~~~~~~~~~~iDp~vf~D-~dG~~Yl~~g~~~---~~i~~ 153 (318)
T 1gyh_A 81 SVSAFGKNTSAIGVTVNKTL-NPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIAD-DHGQVWMSFGSFW---GGLKL 153 (318)
T ss_dssp EECCTTSCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEEC-TTSCEEEEECBST---TCEEE
T ss_pred EeccCCCCcceEEEEEeCCC-CCCCCCcceecC--CcccccCCCCCCCCcccCCeEEC-CCCCEEEEeeccC---CCEEE
Confidence 987543 4567889999762 2211 129884 56775422223357899996544 6899999998742 23667
Q ss_pred EE-eCC------CCCCEEccc-----cccc-CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 212 YR-SRD------FMKWTKAKH-----PIHS-LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 212 y~-S~D------l~~W~~~~~-----~l~~-~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
++ ++| +..|+.... .+.. .....++|||.+|+.+ | +++|++|..
T Consensus 154 ~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yYL~~s~~ 210 (318)
T 1gyh_A 154 FKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp EEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred EEeCCccccccceeecceecccCcceeecccCCCCcceeccEEEEEC--C-------------EEEEEEEeC
Confidence 77 455 346654310 1111 1234689999999997 5 899999864
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-16 Score=165.05 Aligned_cols=175 Identities=17% Similarity=0.150 Sum_probs=124.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCcc--------CCCeEeeeEEEcCCCeeEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFD--------INGCWSGSATVLPGNKPIIL 133 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D--------~~gv~SGsav~~~dg~~~l~ 133 (574)
.+++++|+||||++. .+|.|++|+||+||+.++.+|.+...|+ ..++|+++++. .+|+++||
T Consensus 28 ~i~~~~g~yYl~~t~---------~~i~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~yyly 97 (314)
T 3cu9_A 28 VIAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPDICF-YNGIYYLY 97 (314)
T ss_dssp EEEEETTEEEEEESE---------ETSEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-ETTEEEEE
T ss_pred EEEEECCEEEEEECC---------CCeeEEECcCCCCccCCCcccCCcchhhhccCCCcccCceecCcEEE-ECCEEEEE
Confidence 568889999999986 2599999999999999999998876664 47899999987 49999999
Q ss_pred EeeecCC-CcceEEEEEecCCCCccc--ceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEE
Q 008189 134 YTGVDHK-ERQVQNYAVPANPSDPYL--RKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAY 210 (574)
Q Consensus 134 YTg~~~~-~~~~q~lA~s~D~~d~~l--~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ 210 (574)
||+.... ..+.+++|+|++. |+.. .+|++. ++|+..+.. ...+.+||.|++ +++|++||++++.. +.|.
T Consensus 98 yt~~~~~~~~~~igva~s~~~-dP~gp~~~w~~~--~~~~~~~~~-~~~~~iDp~vf~-D~dG~~Yl~~g~~~---~~i~ 169 (314)
T 3cu9_A 98 YSVSTFGKNTSVIGLATNQTL-DPRDPDYEWKDM--GPVIHSTAS-DNYNAIDPNVVF-DQEGQPWLSFGSFW---SGIQ 169 (314)
T ss_dssp EEECCTTCCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBST---TCEE
T ss_pred EEeccCCCCCceEEEEEeCCC-CCCCCCcCcccC--CeEecCCCC-CCCCccCCCeEE-cCCCCEEEEEeccC---CcEE
Confidence 9987542 3567889999762 2211 139884 567654321 234689999654 46899999998742 2366
Q ss_pred EEE-eCCCCC----CEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 211 LYR-SRDFMK----WTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 211 ly~-S~Dl~~----W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
+++ ++|... |+.. .+........++|||.+|+.+ | +++|++|..
T Consensus 170 ~~~l~~d~~~~~~~~~~~-~~~~~~~~~~~~EgP~i~k~~--G-------------~yyL~~s~~ 218 (314)
T 3cu9_A 170 LIQLDTETMKPAAQAELL-TIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (314)
T ss_dssp EEECCTTTCSCCTTCCCE-EEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred EEEECcccCcccCCCceE-EecccCCCCCccCccEEEEEC--C-------------EEEEEEEcC
Confidence 676 444332 3211 111112235689999999997 5 899999864
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=6.8e-16 Score=162.08 Aligned_cols=122 Identities=20% Similarity=0.372 Sum_probs=97.5
Q ss_pred Cceecc---cccCCCC------------CccCCCeEeeeEEEcCCCeeEEEEeeecCC------CcceEEEEEecCCCCc
Q 008189 98 NWEALE---PALYPSK------------PFDINGCWSGSATVLPGNKPIILYTGVDHK------ERQVQNYAVPANPSDP 156 (574)
Q Consensus 98 ~W~~~~---~al~P~~------------~~D~~gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~lA~s~D~~d~ 156 (574)
-|++.+ +.|.|.. .||..+||+|+|+. .+|+++||||++... +.+.|++|+|+|+
T Consensus 16 pf~R~~~~nPIl~p~~~~~~~~~~~~~~~~D~~gv~sgsai~-~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dg--- 91 (356)
T 3taw_A 16 GFERPTGVNPVIKPLPTKFYCPMREDSVAWEESDTFNPAATI-YDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDG--- 91 (356)
T ss_dssp CCBCCTTTCCSBCCCCCEEEETTTTEEEETTSSEEEEEEEEE-ETTEEEEEEEEECSSSCSTTSSCEEECCEEESSS---
T ss_pred ceeeCCCCCCeEccCCccccCcccccCCccccCCeECcEEEE-ECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCC---
Confidence 377654 4788876 68999999999988 599999999998653 4678999999985
Q ss_pred ccceeeccCCCceEecCCCCC-----CcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEccccc
Q 008189 157 YLRKWIKPDNNPVVFPGPDVN-----ASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPI 227 (574)
Q Consensus 157 ~l~~w~k~~~~Pvi~~~~~~~-----~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l 227 (574)
++|+|.+ +|||.+....+ ..++|||+|++. ++|.|+|++.+..+..+++.+|+|+||.+|++.+.++
T Consensus 92 --i~w~~~~-~pvl~p~~~~~~~~~~~~~~~DP~v~~~-~dg~y~m~yt~~~~~~~~i~la~S~Dl~~W~~~g~i~ 163 (356)
T 3taw_A 92 --IHFERDT-KPAFYPAKDNQAENECPGGTEDPRIAMT-EDGTYVLLYTQWNRKVPRLAVATSKDLKHWTKFGPAF 163 (356)
T ss_dssp --SSCEECS-SCSBCCCSSTTHHHHTTTEEEEEEEEEC-TTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred --ccceECC-cceecCCCccccccccCCceECCEEEEE-CCCEEEEEEEEeCCCCceEEEEECCCCCCceEeeeEc
Confidence 7999974 79996544322 368999996544 5889999988766556789999999999999988544
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.1e-15 Score=158.58 Aligned_cols=148 Identities=19% Similarity=0.218 Sum_probs=110.8
Q ss_pred eeEEECCEEEEEEeeCC--CCCC-CCccEEEEeecCCcCCceecccc-cCCC------------------CCccCCCeEe
Q 008189 62 GPMYYKGIYHLFYQYNP--KGAV-WGNIVWAHSVSKDLINWEALEPA-LYPS------------------KPFDINGCWS 119 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P--~~~~-~g~~~Wgha~S~Dlv~W~~~~~a-l~P~------------------~~~D~~gv~S 119 (574)
.+++++|+|||||+.+. .+.. ++.+.|++|+|+|+. |++++.+ +.|. ..||..+++.
T Consensus 174 sVi~~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~DG~-W~~~~~pli~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~ 252 (408)
T 3p2n_A 174 EIMKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP-WTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHD 252 (408)
T ss_dssp EEEEETTEEEEEEEEECSSCCTTCCCEEEEEEESSTTCC-CEECSSCSBCCCSCCEECSSSCCTTCEEECCSTTSSEEEE
T ss_pred EEEEECCEEEEEEEeecCCCCCcCCCceEEEEEECCCCC-EEECCcceeCCCCCceEEEecCCcccccccceecCCCeEc
Confidence 66778999999999863 2222 356889999999998 9998644 4443 4677778999
Q ss_pred eeEEEcCCCeeEEEEeeecCC-------CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCC
Q 008189 120 GSATVLPGNKPIILYTGVDHK-------ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSND 192 (574)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~~-------~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~ 192 (574)
++++. .+|+++|+|++.... +.+.+++|+|+|.. ..|+|.+++||+... .||+ +|++.+
T Consensus 253 P~v~~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPVl~~~--------~dp~-Vw~~~d 318 (408)
T 3p2n_A 253 PCIIP-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK----GPYVKSPYNPISNSG--------HEIC-VWPYNG 318 (408)
T ss_dssp EEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSSC--------SSCC-EEEETT
T ss_pred ceEEE-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCC----CCcEECCCCCcccCC--------CCCe-eEecCC
Confidence 98876 599999999998531 24788999998863 379998888998521 3899 576567
Q ss_pred CeEEEEEeeecCCeeEEEEEEeCCCCCCEEccccc
Q 008189 193 GHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPI 227 (574)
Q Consensus 193 g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l 227 (574)
|.|+|+. . ++.|.+.+|+|+|+.+|++.+.+.
T Consensus 319 G~y~mi~-~--~g~gh~~i~~S~Dg~~W~~~~~i~ 350 (408)
T 3p2n_A 319 GIASLIT-T--DGPEKNTIQWAPDGINFEIKSVIP 350 (408)
T ss_dssp EEEEEEC-S--SSTTCSEEEEESSSSCCEEEEECS
T ss_pred CEEEEEE-E--CCCCcEEEEECCCCCEEEEEeecc
Confidence 7777773 2 233445568999999999988654
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-14 Score=157.47 Aligned_cols=194 Identities=16% Similarity=0.143 Sum_probs=133.5
Q ss_pred Ccee--eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCcc------CCCeEeeeEEEcCCCe
Q 008189 58 HWIN--GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFD------INGCWSGSATVLPGNK 129 (574)
Q Consensus 58 gw~N--g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D------~~gv~SGsav~~~dg~ 129 (574)
|++. .+++++|+||||++..+.. ..|.+++|+||+||+.++.+|.+...++ ..++|+++++. .+|+
T Consensus 12 g~~~DP~i~~~~~~yY~~~s~~~~~-----~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~wAP~i~~-~~g~ 85 (528)
T 1yrz_A 12 GFHPDPSIVRVGDDYYIATSTFEWF-----PGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HDGT 85 (528)
T ss_dssp SSCCSCEEEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETTE
T ss_pred CCCCCCeEEEECCEEEEEEccCccC-----CCeEEEECCCccCceECccccCCcccccccCCCCCCCEECCeEEE-ECCE
Confidence 4566 6788999999999865422 3589999999999999999987754332 46899999987 5999
Q ss_pred eEEEEeeecC-C---CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEE---Eeee
Q 008189 130 PIILYTGVDH-K---ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRML---VGSR 202 (574)
Q Consensus 130 ~~l~YTg~~~-~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~---~g~~ 202 (574)
+|||||+... . +.+.+++|+|+|.. -.|++ |+.. ....+||.|+++ ++|++||+ ++++
T Consensus 86 ~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~------~~~~iDp~vf~D-~dG~~Yl~~~~~~~~ 150 (528)
T 1yrz_A 86 FYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL------NSSGFDPSLFHD-DDGRKWLVNMIWDYR 150 (528)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC------CCSCSCCEEEEC-TTSCEEEEEEEECCC
T ss_pred EEEEEecccCCCCCcccceEEEEEeCCCC----CCccc----cEEC------CCCcCCCceEEC-CCCCEEEEEeeccCC
Confidence 9999997642 1 23458899998753 35874 4432 135799996554 78999999 5554
Q ss_pred cC--CeeEEEEEE-eCCCCCCEEccc--ccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC---ce
Q 008189 203 RK--HRGMAYLYR-SRDFMKWTKAKH--PIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT---RY 274 (574)
Q Consensus 203 ~~--~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~---~~ 274 (574)
.. ..+.|.+++ ++|. ++..+. .+..+....++|||.+++.+ | +|+|++|.... +.
T Consensus 151 ~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~~g~~~~~~ 213 (528)
T 1yrz_A 151 KGNHPFAGIILQEYSEAE--QKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGGTEYEHA 213 (528)
T ss_dssp TTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESCSSTTCE
T ss_pred CCCCCCCeEEEEEECCcc--CCCCCCCEEEEcCCCCCccCCCEEEEEC--C-------------EEEEEEeCCCCCCCcE
Confidence 32 235677887 5664 454443 23333345689999999987 6 89999987542 23
Q ss_pred eEEEEEEEeCCCCcccc
Q 008189 275 DYYTIGTYNRDKDRYVP 291 (574)
Q Consensus 275 ~~Y~vG~~d~~~~~F~~ 291 (574)
..|+..+ ...++|+.
T Consensus 214 ~~~~rs~--~~~GP~~~ 228 (528)
T 1yrz_A 214 ATLARSQ--SIDGPYET 228 (528)
T ss_dssp EEEEEES--STTCCCEE
T ss_pred EEEEEEC--CCCCCCCc
Confidence 4444443 22346654
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-13 Score=146.71 Aligned_cols=191 Identities=16% Similarity=0.181 Sum_probs=133.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC--ccC-CCeEeeeEEEc-CCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP--FDI-NGCWSGSATVL-PGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~--~D~-~gv~SGsav~~-~dg~~~l~YTg~ 137 (574)
++++++|+||||.++.+.+.. ....|.+++|+||+||+.++.+|.+... +.. .++|.++++.. .+|+++||||+.
T Consensus 28 sIi~~~g~YYly~T~~~~~~~-~~~gi~v~sS~DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~V~y~~~dGkYYLyyt~~ 106 (441)
T 3nqh_A 28 CIVEENGRYYLFGEYKSDKSN-AFPGFSCYSSDDLVNWKFERVVLPMQSSGILGPDRVGERVKVMKCPSTGEYVMYMHAD 106 (441)
T ss_dssp EEEEETTEEEEEEECCCSSCS-SCCCEEEEEESSSSSCEEEEEEECCCSSSTTSTTEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEEECCEEEEEEEcCCccCC-CCCCeeEEECCCCCCcEECceeeccCCccccCCCCccCCceeEEEccCCEEEEEEEeC
Confidence 678899999999998765432 3467999999999999999999977643 322 35799999763 489999999987
Q ss_pred cCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE-eC
Q 008189 138 DHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR-SR 215 (574)
Q Consensus 138 ~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~-S~ 215 (574)
... +.+.+++|+|++.. -.|+. .+||+.... ....+||.|++ +++|++||+++.. .| ++ ++
T Consensus 107 ~~~~~~~~igVAtSdsP~----GPwt~--~gpl~~~g~---~~~~IDPsvF~-DdDGk~YL~~g~~-----~I--~eLs~ 169 (441)
T 3nqh_A 107 DMNYKDPHIGYATCSTIA----GEYKL--HGPLLYEGK---PIRRWDMGTYQ-DTDGTGYLLLHGG-----IV--YRLSK 169 (441)
T ss_dssp ETTSCSCEEEEEEESSTT----SCCEE--EEECEETTE---ECCCCSEEEEE-CTTSCEEEEEGGG-----EE--EEECT
T ss_pred CCCCCcceEEEEEeCCCC----CCceE--cceeecCCC---cccccCceEEE-eCCCCEEEEeCCC-----cE--EEeCC
Confidence 542 34688999998764 35775 357774321 12468999654 4799999999852 33 44 78
Q ss_pred CCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC---CceeEEEEEEEeCCCCccc
Q 008189 216 DFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL---TRYDYYTIGTYNRDKDRYV 290 (574)
Q Consensus 216 Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~---~~~~~Y~vG~~d~~~~~F~ 290 (574)
|+.++......+. .+...|||.+|+.+ | +++|++|... .....|...+ ...++|+
T Consensus 170 D~~~~~g~~~~i~---~g~~~EgP~i~K~~--G-------------~YYL~~S~~~g~~~~~~~~arS~--s~~GPw~ 227 (441)
T 3nqh_A 170 DYRTAEEKVVSGV---GGSHGESPAMFKKD--G-------------TYFFLFSNLTSWEKNDNFYFTAP--SVKGPWT 227 (441)
T ss_dssp TSSSEEEEEESCS---TTCCCEEEEEEEET--T-------------EEEEEEECSCTTSCCCCEEEEES--STTCCCE
T ss_pred ccccccCceEEeC---CCCceECcEEEEEC--C-------------EEEEEEeCCCCcCCCceEEEEeC--CCCCCce
Confidence 8888764322221 23568999999987 6 8999998742 1223455543 2234554
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.4e-13 Score=148.62 Aligned_cols=181 Identities=16% Similarity=0.242 Sum_probs=127.5
Q ss_pred eeEEECCEEEEEEeeCCC-----C-----CCCCccEEEEeecCCcCCceecccccCCC----------CCccCCCeEeee
Q 008189 62 GPMYYKGIYHLFYQYNPK-----G-----AVWGNIVWAHSVSKDLINWEALEPALYPS----------KPFDINGCWSGS 121 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~-----~-----~~~g~~~Wgha~S~Dlv~W~~~~~al~P~----------~~~D~~gv~SGs 121 (574)
.+++++|+||||..+... + .......|.+++|+||+||+.++.++.+. ..|. .++|.++
T Consensus 26 ~i~~~~g~yYly~t~~~~~~~~~g~~~~~~~~~~~~i~i~~S~DLv~W~~~g~v~~~~~~~~~~g~~~~~w~-~~~WAP~ 104 (487)
T 3c7f_A 26 VALTYNGRVYIYMSSDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKWA-GASWAPS 104 (487)
T ss_dssp EEEEETTEEEEEEECCCCEECTTSCEECCCSTTCCSEEEEEESSSSSEEEEEEECCBCSTTGGGGTCSBTTC-SCCEEEE
T ss_pred CeEEECCEEEEEEcCCcccccccccccccccccccceEEEECCCCcCcEEccccccCCcccccccccccCcc-ccCcchh
Confidence 577889999999997642 1 12234679999999999999999887665 2233 4799999
Q ss_pred EEEc-CC--CeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecC-CCCC-CcCccCCeeEEecCCCeEE
Q 008189 122 ATVL-PG--NKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG-PDVN-ASAFRDPTTAWWSNDGHWR 196 (574)
Q Consensus 122 av~~-~d--g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~-~~~~-~~~fRDP~Vvw~~~~g~~~ 196 (574)
++.. .+ |++|||||... +.+++|+|+|.. -.|++..+.|++... ++.. ....+||.|+++ ++|++|
T Consensus 105 v~~~~~~g~g~yylyyt~~~----~~i~va~s~~p~----Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~D-ddG~~Y 175 (487)
T 3c7f_A 105 IAVKKINGKDKFFLYFANSG----GGIGVLTADSPI----GPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVD-DDGTGY 175 (487)
T ss_dssp EEEEEETTEEEEEEEEESTT----BCEEEEEESSTT----CCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEEC-TTSCEE
T ss_pred eEEEecCCCCeEEEEEEcCC----cEEEEEEeCCCC----CCcccCCCCeEeecCCCCccCCCCccCCceEEc-CCCCEE
Confidence 9863 13 69999999742 578999998863 358875456887532 2221 145799997655 689999
Q ss_pred EEEeeecC-----------CeeEEEEE-EeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEE
Q 008189 197 MLVGSRRK-----------HRGMAYLY-RSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFV 264 (574)
Q Consensus 197 M~~g~~~~-----------~~G~i~ly-~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~v 264 (574)
|++|+... ....+.+. -++|+..|......+. ...+.|+|.+++.+ | +|+
T Consensus 176 l~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~g~~~~i~---~p~~~Egp~i~k~~--G-------------~YY 237 (487)
T 3c7f_A 176 LYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTID---APFMFEDSGLHKYN--G-------------TYY 237 (487)
T ss_dssp EEEECCCSSTTSCCHHHHHCCCCEEEEEECTTSSSEEEEEEEEC---CTTEEEEEEEEEET--T-------------EEE
T ss_pred EEECCcccCccccccccccCCCceEEEEECCCeeeccCccEEec---CCceEecceEEEEC--C-------------EEE
Confidence 99987421 01234444 4789999975432222 23579999999987 6 889
Q ss_pred EEEeec
Q 008189 265 LKVSLD 270 (574)
Q Consensus 265 l~~s~~ 270 (574)
|++|..
T Consensus 238 l~ys~~ 243 (487)
T 3c7f_A 238 YSYCIN 243 (487)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 988864
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.8e-14 Score=148.87 Aligned_cols=122 Identities=21% Similarity=0.416 Sum_probs=97.3
Q ss_pred CceecccccCCCC-------------CccCCCeEeeeEEEcCCCeeEEEEeeecCC------CcceEEEEEecCCCCccc
Q 008189 98 NWEALEPALYPSK-------------PFDINGCWSGSATVLPGNKPIILYTGVDHK------ERQVQNYAVPANPSDPYL 158 (574)
Q Consensus 98 ~W~~~~~al~P~~-------------~~D~~gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~lA~s~D~~d~~l 158 (574)
+|+...++|.|+. .||..+||+|+++. .+|+++||||++... +.+.+++|+|+|+
T Consensus 21 r~~~~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai~-~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DG----- 94 (364)
T 3qc2_A 21 RPKNVNPVISPIENTKFYCPLTKDSIAWESNDTFNPAATL-YNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDG----- 94 (364)
T ss_dssp CCTTTCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEEE-ETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSS-----
T ss_pred eCCCCCCeEecCCcccccccccccccccccCceECceEEE-ECCEEEEEEEEECCCCcccCCCceEEEEEEeCCC-----
Confidence 3443356899986 68999999999987 599999999998653 4578999999996
Q ss_pred ceeeccCCCceEecCCCCCC-----cCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEccccc
Q 008189 159 RKWIKPDNNPVVFPGPDVNA-----SAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPI 227 (574)
Q Consensus 159 ~~w~k~~~~Pvi~~~~~~~~-----~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l 227 (574)
++|++. .+|||.+....+. ..+|||+|+ ..++|+|+|++++.....+++.+++|+|+.+|++.+.++
T Consensus 95 i~w~~~-~~Pvl~P~~~~~~~~e~~~gv~DP~v~-~~edG~yym~Yta~~~~~~~i~lA~S~Dl~~W~k~g~i~ 166 (364)
T 3qc2_A 95 THFQRE-KTPVFYPDNDSQKELEWPGGCEDPRIA-VTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAF 166 (364)
T ss_dssp SSCEEC-SSCSBCCCSSTTHHHHTTTEEEEEEEE-ECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred ceeeEc-CcCeEcCCCccccccccCCcEECCEEE-EeCCCEEEEEEEecCCCCeEEEEEEECCCCEEEEeeecc
Confidence 799996 4799865544332 579999965 435899999999876556789999999999999987543
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.52 E-value=4e-14 Score=147.66 Aligned_cols=121 Identities=7% Similarity=0.124 Sum_probs=99.5
Q ss_pred CCcCCceecccccCCCC-CccCCCeEeeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEec
Q 008189 94 KDLINWEALEPALYPSK-PFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP 172 (574)
Q Consensus 94 ~Dlv~W~~~~~al~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~ 172 (574)
..+++|+..| +|.|+. .| ..|||+++++.. +|+++|||++....+...+++|+|+|+ ++|++.+ +|+|.+
T Consensus 34 ~~~~r~~~~P-iL~p~~~~~-~~gv~n~~~i~~-~g~~~lfY~~~~~~~~~~~~~A~S~Dg-----i~w~~~~-~pvl~p 104 (338)
T 1vkd_A 34 GPVWRYSKNP-IIGRNPVPK-GARVFNSAVVPY-NGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQWV 104 (338)
T ss_dssp SSEEECTTCC-SBCBSCSTT-EEEEEEEEEEEE-TTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCEE
T ss_pred CceEECCCCc-eECCCCCcc-cCeEEccEEEEE-CCEEEEEEEEECCCCcEEEEEEEeCCC-----CccEECC-CCEEeC
Confidence 3578888777 888985 77 789999999875 999999999987666789999999986 7999964 788865
Q ss_pred C--CCCCCcCcc-CCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccc
Q 008189 173 G--PDVNASAFR-DPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHP 226 (574)
Q Consensus 173 ~--~~~~~~~fR-DP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~ 226 (574)
. ..++..++| ||+|+ + .+++|||++++ ....+++.+|+|+|+.+|++.+.+
T Consensus 105 ~~~~~~~~~g~~yDP~v~-~-~~d~yym~yt~-~~~~~~i~la~S~Dl~~W~~~~~i 158 (338)
T 1vkd_A 105 DVNGEPFQPSYAYDPRVV-K-IEDTYYITFCT-DDHGPTIGVGMTKDFKTFVRLPNA 158 (338)
T ss_dssp CTTSCBCCCSSEEEEEEE-E-ETTEEEEEEEE-ESSSEEEEEEEESSSSSEEEECCS
T ss_pred CCCCccccCCEEeCcEEE-E-ECCEEEEEEEE-cCCcceEEEEEECCCCeEEECCcc
Confidence 4 445668899 99965 4 46899999998 655678999999999999997643
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=8.5e-13 Score=145.81 Aligned_cols=194 Identities=15% Similarity=0.102 Sum_probs=131.1
Q ss_pred Ccee--eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCc------cCCCeEeeeEEEcCCCe
Q 008189 58 HWIN--GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPF------DINGCWSGSATVLPGNK 129 (574)
Q Consensus 58 gw~N--g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~------D~~gv~SGsav~~~dg~ 129 (574)
|++. .+++++|+||||++..+.. ..|.+++|+||+||+.++.+|.+...+ ...++|+++++. .+|+
T Consensus 10 g~~~DP~ii~~~~~yY~~~s~~~~~-----~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g~ 83 (533)
T 1yif_A 10 GFNPDPSICRAGEDYYIAVSTFEWF-----PGVQIHHSKDLVNWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSY-SDGK 83 (533)
T ss_dssp SSCCSCEEEEETTEEEEEECCBTEE-----SBCEEEEESSSSSEEEEECSBCSTTTCCCTTCCTTCBBCSCEEEE-ETTE
T ss_pred CCCCCCeEEEECCEEEEEEecCCCC-----CCeEEEEeCCCCCCeECCccccCcccccccCCCCCCCEECceEEE-ECCE
Confidence 4444 5788899999998865421 258999999999999999888765322 247899999987 5999
Q ss_pred eEEEEeeecCC----CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec--
Q 008189 130 PIILYTGVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-- 203 (574)
Q Consensus 130 ~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-- 203 (574)
+|||||+.... +.+.+++|+|+|.. -.|++ |+.-. ...+||.++++ ++|++||+++...
T Consensus 84 ~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~D-~dG~~Yl~~~~~~~~ 148 (533)
T 1yif_A 84 FWLIYTDVKVVDGAWKDCHNYLVTCETIN----GDWSE----PIKLN------SSGFDASLFHD-TDGKKYLLNMLWDHR 148 (533)
T ss_dssp EEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEEC-TTSCEEEEEEEECCC
T ss_pred EEEEEEeccCCCCCcccccEEEEEeCCCC----CCccc----cEEcC------CCcCCCceEEC-CCCCEEEEEEecccc
Confidence 99999986431 23577899998753 35875 44321 24689997654 6899999988432
Q ss_pred C---CeeEEEEEE-eCCCCCCEEccc--ccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC---ce
Q 008189 204 K---HRGMAYLYR-SRDFMKWTKAKH--PIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT---RY 274 (574)
Q Consensus 204 ~---~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~---~~ 274 (574)
. ..+.|.+++ ++|+. +..+. .+..+....++|||.+++.+ | +|+|++|.... +.
T Consensus 149 ~g~~~~~~i~~~~l~~d~~--~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg~~~~~~ 211 (533)
T 1yif_A 149 IDRHSFGGIVIQEYSDKEQ--KLIGKPKVIFEGTDRKLTEAPHLYHIG--N-------------YYYLLTAEGGTRYEHA 211 (533)
T ss_dssp TTSCSEEEEEEEEEETTTT--EECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESCSSTTCE
T ss_pred cCCCCCCCEEEEEECCccC--CCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCCCCCCeE
Confidence 1 124567776 66653 33333 23333344589999999997 6 89999987542 23
Q ss_pred eEEEEEEEeCCCCcccc
Q 008189 275 DYYTIGTYNRDKDRYVP 291 (574)
Q Consensus 275 ~~Y~vG~~d~~~~~F~~ 291 (574)
..|+..+ ...++|+.
T Consensus 212 v~~~rs~--s~~GP~~~ 226 (533)
T 1yif_A 212 ATIARSA--NIEGPYEV 226 (533)
T ss_dssp EEEEEES--STTCCCEE
T ss_pred EEEEEEC--CCCceeee
Confidence 4444443 22346643
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-12 Score=144.46 Aligned_cols=176 Identities=17% Similarity=0.110 Sum_probs=125.4
Q ss_pred Ccee--eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCc------cCCCeEeeeEEEcCCCe
Q 008189 58 HWIN--GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPF------DINGCWSGSATVLPGNK 129 (574)
Q Consensus 58 gw~N--g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~------D~~gv~SGsav~~~dg~ 129 (574)
|++. .+++++|+||||++.... ...|.+++|+||+||+.++.+|.+...+ +..++|+++++. .+|+
T Consensus 11 g~~~DP~i~~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g~ 84 (535)
T 2exh_A 11 GFHPDPSICRVGDDYYIAVSTFEW-----FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDGK 84 (535)
T ss_dssp SSCCSCEEEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETTE
T ss_pred CCCCCCEEEEECCEEEEEECCCCC-----CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECCE
Confidence 4555 678899999999885432 2358999999999999999988765322 347899999987 5999
Q ss_pred eEEEEeeecCC----CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec--
Q 008189 130 PIILYTGVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-- 203 (574)
Q Consensus 130 ~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-- 203 (574)
+|||||+.... +.+.+++|+|+|.. -.|++ |+... ...+||.++++ ++|++||+++...
T Consensus 85 ~ylyyt~~~~~~g~~~~~~~~va~s~~~~----Gpw~~----p~~~~------~~~iDp~vf~D-ddG~~Yl~~~~~~~~ 149 (535)
T 2exh_A 85 FWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFHD-EDGRKYLVNMYWDHR 149 (535)
T ss_dssp EEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEEC-TTSCEEEEEEEECCC
T ss_pred EEEEEEeccCCCCCccccceEEEEeCCCC----CCccc----cEecC------CCcCCCceEEC-CCCCEEEEEEecCCc
Confidence 99999986431 23567899998753 35875 44321 24699997654 6899999988532
Q ss_pred C---CeeEEEEEE-eCCCCCCEEccc--ccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 204 K---HRGMAYLYR-SRDFMKWTKAKH--PIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 204 ~---~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
. ..+.|.+++ +.|+ |+..+. .+..+....++|||.+++.+ | +|+|++|...
T Consensus 150 ~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 206 (535)
T 2exh_A 150 VDHHPFYGIVLQEYSVEQ--KKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 206 (535)
T ss_dssp TTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cCCCCCCcEEEEEECCcc--CCCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCC
Confidence 1 124577777 5665 555543 23333344589999999997 6 8999998754
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3.7e-12 Score=134.50 Aligned_cols=152 Identities=16% Similarity=0.198 Sum_probs=106.6
Q ss_pred eeEEECCEEEEEEeeCCCCCC-CCccEEEEeecCCc-CCceecc-cccCCC------------------CCccCCCeEee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAV-WGNIVWAHSVSKDL-INWEALE-PALYPS------------------KPFDINGCWSG 120 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~-~g~~~Wgha~S~Dl-v~W~~~~-~al~P~------------------~~~D~~gv~SG 120 (574)
.+++++|+|||||..+..... ....++++|+|+|+ .+|++.+ +.|.|. ..|+..+++.+
T Consensus 129 svi~~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~Gpw~~~~~Pvi~~~~~~~w~~ddd~~~~~~~~~~~d~~~~~~P 208 (374)
T 3r4z_A 129 EVLRHNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGPWTKSDAPILSPENDGVWDTDEDNRFLVKEKGSFDSHKVHDP 208 (374)
T ss_dssp EEEEETTEEEEEEEEECSSCCTTCCBEEEEEEESSTTCCCEECSSCSBCCCCCSEECSSSSCTTCEEECCSTTSSEEEEE
T ss_pred EEEEECCEEEEEEEeccCCCCCCCcceEEEEEECCCCCCeEECCCCEeCCCcCCceeecCCceEEEecCCccccCccccc
Confidence 566789999999997654321 23578999999997 7999874 344443 12455568888
Q ss_pred eEEEcCCCeeEEEEeeecCC-------CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC
Q 008189 121 SATVLPGNKPIILYTGVDHK-------ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG 193 (574)
Q Consensus 121 sav~~~dg~~~l~YTg~~~~-------~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g 193 (574)
+++. .+|+++|+|++.... +...+++|+|++.. -.|+|.+.+||+.. -+||+ +|.. ++
T Consensus 209 ~v~~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~----Gpw~~~~~~Pi~~~--------~~dp~-V~~~-~~ 273 (374)
T 3r4z_A 209 CLMF-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPL----GPYTKSEYNPITNS--------GHEVA-VWPY-KG 273 (374)
T ss_dssp EEEE-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTT----CCCEECTTCCCCSS--------CSSCC-EEEE-TT
T ss_pred eEEE-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCC----CCCEECCCCCEeCC--------CCCCc-eEEe-CC
Confidence 8876 599999999998542 13578999998753 36999888999851 25999 5664 45
Q ss_pred eEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccC
Q 008189 194 HWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSL 230 (574)
Q Consensus 194 ~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~ 230 (574)
.|+++++......+ .++.|+||++|++.+.+...+
T Consensus 274 g~~~mv~~~g~~~~--~l~~S~Dg~~W~~~~~i~~~p 308 (374)
T 3r4z_A 274 GMATMLTTDGPEKN--TCQWAEDGINFDIMSHIKGAP 308 (374)
T ss_dssp EEEEEECSSSTTCS--EEEEETTSSSCEEEEECSCCC
T ss_pred EEEEEEEecCCCce--EEEECCCcCCeEEcceeccCC
Confidence 55444443333334 567799999999998654433
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=8.2e-12 Score=137.71 Aligned_cols=211 Identities=15% Similarity=0.095 Sum_probs=136.5
Q ss_pred cCcccccceeecCCC-cee----eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC--CccCCC
Q 008189 44 KQLHRTAFHFQPPKH-WIN----GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK--PFDING 116 (574)
Q Consensus 44 ~~~~RP~~H~~p~~g-w~N----g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~--~~D~~g 116 (574)
....+|..++..+.| -++ .+++++|+||||....... .....+..++|+||+||+.++.+|.+.. .++..+
T Consensus 39 ~~~~~~g~~w~d~~g~~i~a~DP~Ii~~~g~YY~~~T~~~~~--~~~~gi~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~ 116 (526)
T 3vsf_A 39 EGVIVNGTQFKDTSGNVIHAHGGGMLKHGDYYYWYGEYRDDS--NLFLGVSCYRSKDLVNWEYRGEVLSRNSAPELNHCN 116 (526)
T ss_dssp CCEEESSBCCBCTTSCBCCCEEEEEEEETTEEEEEEEEECTT--SSEEEEEEEEESSSSSCEEEEEEEETTSSGGGSSCE
T ss_pred CceEeCCCccCCCCCCEEeccCCeEEEECCEEEEEEecCCCC--CCcCcEEEEECCCCCCcCCCCccCCCCCCcCcccCc
Confidence 344566555554443 344 6778999999999875332 2346799999999999999999887654 455567
Q ss_pred eEeeeEEEc-CCCeeEEEEeeecC--CCcceEEEEEecCCCCcccceeeccC-CCceEec---CCCCCCcCccCCeeEEe
Q 008189 117 CWSGSATVL-PGNKPIILYTGVDH--KERQVQNYAVPANPSDPYLRKWIKPD-NNPVVFP---GPDVNASAFRDPTTAWW 189 (574)
Q Consensus 117 v~SGsav~~-~dg~~~l~YTg~~~--~~~~~q~lA~s~D~~d~~l~~w~k~~-~~Pvi~~---~~~~~~~~fRDP~Vvw~ 189 (574)
+|.+.++.. .+|++||||+.... .....+++|+|++.. -.|+... ..|+... +.+......+||.||++
T Consensus 117 ~WAP~v~~~~~~Gkyymy~~~~~~~~~~~~~igvats~~p~----Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~vf~D 192 (526)
T 3vsf_A 117 IERPKVMYNASTGEFVMWMHWENGINYGQARAAVAYSKTPD----GKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNVFVD 192 (526)
T ss_dssp EEEEEEEECTTTCCEEEEEEEECSSCSCCCEEEEEEESSSS----SCCEEEEEECSSCTTCCEETTEESCCCCSEEEEEC
T ss_pred eECCEEEEECCCCEEEEEEEeeCCCCCCcceEEEEEcCCCC----CCCEeccccccccccccccCCCCCcccccccEEEC
Confidence 999999874 38999999997521 234688999998864 2566421 1233210 01111145699996544
Q ss_pred cCCCeEEEEEeeecCCeeEEEEEE-eCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEe
Q 008189 190 SNDGHWRMLVGSRRKHRGMAYLYR-SRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVS 268 (574)
Q Consensus 190 ~~~g~~~M~~g~~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s 268 (574)
++|++||++++..+ +.+.+++ ++|+..+......+. .+...|+|.+|+.+ | +|+|++|
T Consensus 193 -~dG~~Yl~~~~~~~--~~i~i~~l~~d~~~~~~~~~~~~---~g~~~EgP~i~k~~--G-------------~YYL~~S 251 (526)
T 3vsf_A 193 -TDGKGYFISAANEN--MDLHLYELTPDYKNIASLKAKLF---VGQQREAPCLIKRN--G-------------YYYLITS 251 (526)
T ss_dssp -TTSCEEEEEEETTT--TEEEEEEECTTSSSEEEEEEEES---TTSCCEEEEEEESS--S-------------CEEEEEE
T ss_pred -CCCCEEEEEEecCC--CceEEEEcCCCcccccCceEEeC---CCCCcCCeEEEEEC--C-------------EEEEEEc
Confidence 79999999986432 2355555 577666543221121 23568999999986 5 8999998
Q ss_pred ecCC---ceeEEEEEE
Q 008189 269 LDLT---RYDYYTIGT 281 (574)
Q Consensus 269 ~~~~---~~~~Y~vG~ 281 (574)
.... ....|+..+
T Consensus 252 ~~tg~~~~~~~~a~S~ 267 (526)
T 3vsf_A 252 GCTGWNPNQAKYAYSK 267 (526)
T ss_dssp CCCTTSCCCEEECEES
T ss_pred CCCCcCCCceEEEEeC
Confidence 4321 234555553
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.34 E-value=2.6e-11 Score=129.09 Aligned_cols=151 Identities=19% Similarity=0.233 Sum_probs=106.9
Q ss_pred eeEEECCEEEEEEeeCCCCC-CCCccEEEEeecCC-cCCceecc-cccCCCC------------------CccCCCeEee
Q 008189 62 GPMYYKGIYHLFYQYNPKGA-VWGNIVWAHSVSKD-LINWEALE-PALYPSK------------------PFDINGCWSG 120 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~-~~g~~~Wgha~S~D-lv~W~~~~-~al~P~~------------------~~D~~gv~SG 120 (574)
.+++++|+|+|||..+.... ..+...+|.|+|+| .-.|++.+ ++|.|.. .||..+++.+
T Consensus 169 ~Vi~~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~Gpwt~~~~Pvl~~~~~~~W~~ddd~~~~~~~~~~wD~~~~~~P 248 (404)
T 4ak5_A 169 EVMEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGLWTKTDKPVLEPSDTGEWEGDEDNRFKVVSKGDFDSHKVHDP 248 (404)
T ss_dssp EEEEETTEEEEEEEEECSCCCTTCCCEEEEEEESSTTCCCEECSSCSBCCCSCCEECSSSSCTTCEEECCSTTSSEEEEE
T ss_pred EEEEECCEEEEEEEeccCCCCCCCcceEEEEEEeCCCCCceECCCceecCCCCcceeeccCceeeeccCCcccCCcEECC
Confidence 56778999999998764422 12456799999886 24899875 3454432 3566788999
Q ss_pred eEEEcCCCeeEEEEeeecCC-------CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC
Q 008189 121 SATVLPGNKPIILYTGVDHK-------ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG 193 (574)
Q Consensus 121 sav~~~dg~~~l~YTg~~~~-------~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g 193 (574)
+++. .+|+++|||+|.... +.+.+++|+|++.. -.|+|.+.+||+.. + .+++ +|++.++
T Consensus 249 ~v~~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPv~~~--~------~e~~-Vw~~~dg 314 (404)
T 4ak5_A 249 CIIP-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPM----GPYVKSEYNPISNS--G------HEVC-VWPYKGG 314 (404)
T ss_dssp EEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSS--C------SSCC-EEEETTE
T ss_pred EEEE-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCC----CCcEECCCCceecC--C------Ccce-EEEeCCc
Confidence 9876 599999999998542 14689999998863 47999888999852 1 2567 6885555
Q ss_pred eEEEEEeeecCCeeEEEEEEeCCCCCCEEccccccc
Q 008189 194 HWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHS 229 (574)
Q Consensus 194 ~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~ 229 (574)
.|+|+... ....| .++.|+||++|++.+.+...
T Consensus 315 ~~~ll~~~-g~~~g--~l~~S~Dg~~W~~~~~l~~~ 347 (404)
T 4ak5_A 315 IASLITTD-GPEKN--TLQWSPDGINFEIMSVVKGA 347 (404)
T ss_dssp EEEEECSS-STTCS--EEEEESSSSCCEEEEECSCC
T ss_pred EEEEEEec-CCCce--EEEECCCCCeEEEeeeeccC
Confidence 55666432 23344 57779999999999865543
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=4.8e-10 Score=123.92 Aligned_cols=190 Identities=16% Similarity=0.092 Sum_probs=126.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC------ccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP------FDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~------~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+||||..... ....+..++|+||+||+.++.+|.+... .+..++|.++++. .+|++|||||
T Consensus 16 ~i~~~~~~yY~~~s~~~-----~~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g~~yly~t 89 (538)
T 3c2u_A 16 SIVRAGDDYYIATSTFE-----WFPGVQIHHSKDLVHWHLVAHPLSTTEFLDMKGNPDSGGIWAPDLSY-ADGKFWLIYT 89 (538)
T ss_dssp EEEEETTEEEEEECCBT-----EESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETTEEEEEEE
T ss_pred EEEEECCEEEEEEccCC-----CCCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECCEEEEEEE
Confidence 57888999999875421 1235788999999999999988865431 1246799999987 5999999999
Q ss_pred eecCC----CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-----Ce
Q 008189 136 GVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-----HR 206 (574)
Q Consensus 136 g~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~-----~~ 206 (574)
..... ..+.+++|+|+|.. -.|++ |+... ....||.++++ ++|++||+++.... ..
T Consensus 90 ~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~D-ddG~~Yl~~~~~~~~~~~~~~ 154 (538)
T 3c2u_A 90 DVKVVDGMWKDCHNYLTTAEDIK----GPWSK----PILLN------GAGFDASLFHD-PSGKKYLVNMYWDQRVYHHNF 154 (538)
T ss_dssp EECCCSSSCCCEEEEEEEESSTT----CCCCC----CEEEE------CSCSCCEEEEC-TTSCEEEEEEEECCCTTSCSE
T ss_pred eccCCCCCcccccEEEEEECCCC----CCccc----cEecC------CCcCCCeeEEC-CCCCEEEEEEecCCccCCCCC
Confidence 76431 23567899998763 35874 44322 23589997655 68999999874321 12
Q ss_pred eEEEEEE-eCCCCCCEEcccc--cccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC---ceeEEEEE
Q 008189 207 GMAYLYR-SRDFMKWTKAKHP--IHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT---RYDYYTIG 280 (574)
Q Consensus 207 G~i~ly~-S~Dl~~W~~~~~~--l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~---~~~~Y~vG 280 (574)
+.|.+.+ +.|. |+..+.+ +..+......|+|.+++.+ | +|+|++|.... +...|+..
T Consensus 155 ~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg~~~~~~~~~~rS 217 (538)
T 3c2u_A 155 YGIALQEYSVAE--EKLIGKPEIIYKGTDIAYTEGPHLYYIN--D-------------MYYLMTAEGGTTYQHSETIARS 217 (538)
T ss_dssp EEEEEEEEETTT--TEECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESCSSTTCEEEEEEE
T ss_pred CCEEEEEECCcc--CCCCCCCEEEecCCCCCccccceEEEEC--C-------------EEEEEEecCCCCCCeEEEEEEE
Confidence 4566666 5554 4555432 3333334579999999986 6 89999987542 23444444
Q ss_pred EEeCCCCcccc
Q 008189 281 TYNRDKDRYVP 291 (574)
Q Consensus 281 ~~d~~~~~F~~ 291 (574)
+ ...++|+.
T Consensus 218 ~--s~~GP~~~ 226 (538)
T 3c2u_A 218 K--TIHGPYEI 226 (538)
T ss_dssp S--STTCCCEE
T ss_pred C--CCCCCCcc
Confidence 3 22345643
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=99.18 E-value=7.3e-10 Score=120.30 Aligned_cols=176 Identities=18% Similarity=0.205 Sum_probs=111.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC--------------c-cCCCeEeeeEEEcC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP--------------F-DINGCWSGSATVLP 126 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~--------------~-D~~gv~SGsav~~~ 126 (574)
.+++++|+|+||... ...++|+||+||+.++.+|.+... | ...++|.++++...
T Consensus 40 sii~~~g~YYl~~T~-----------~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~l~~~~~w~~~~~~WAP~vi~~~ 108 (470)
T 2x8s_A 40 SIIETNGTFYVFGSH-----------LASAKSNDLMQWQQLTTSVSNDNPLIPNVYEELKETFEWAQSDTLWAADVTQLA 108 (470)
T ss_dssp EEEEETTEEEEECST-----------TCEEEESSSSBCEEEECSCSTTCTTSTTHHHHTHHHHHHHTCSSCCCCEEEECT
T ss_pred EEEEECCEEEEEECc-----------CceEECCCcccceeccccccccccccccccccccccccccCCCceECCeEEEec
Confidence 477889999998532 235899999999999877754321 2 23689999998755
Q ss_pred CCeeEEEEeeecCC-CcceEEEEEecCCCCcccceeeccCCCceEecC-----CC--C---CCcCccCCeeEEecCCCeE
Q 008189 127 GNKPIILYTGVDHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG-----PD--V---NASAFRDPTTAWWSNDGHW 195 (574)
Q Consensus 127 dg~~~l~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~-----~~--~---~~~~fRDP~Vvw~~~~g~~ 195 (574)
+|++||||+..... ....+++|+|+|.. -.|+.. +.++.... .+ + .....+||.|+++ ++|++
T Consensus 109 dGkyylyys~~~~~~~~~~IgvatSddp~----GPw~~~-g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf~D-dDG~~ 182 (470)
T 2x8s_A 109 DGKYYMYYNACRGDSPRSAMGVAVADNIE----GPYKNK-GIFLKSGMEGTSSDGTPYDATKHPNVVAPHTFFD-KDGKL 182 (470)
T ss_dssp TSCEEEEEEEECSSSCCEEEEEEEESSTT----CCCEEE-EEEEEECCSSBCTTSSBCCTTTSCCSCCCEEEEC-TTSCE
T ss_pred CCEEEEEEEeccCCCCccEEEEEEeCCCC----CCceeC-CeeeccCcccccccccccccccCCCCCCCCEEEc-CCCCE
Confidence 89999999986432 34578899998763 358874 23443321 00 1 1235689997655 68999
Q ss_pred EEEEeeecCCeeEEEEEEe-CCC---CCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 196 RMLVGSRRKHRGMAYLYRS-RDF---MKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 196 ~M~~g~~~~~~G~i~ly~S-~Dl---~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
||++|... +.|.+.+- +|. ..|...+..+. .......|.|.++.....| +++|++|...
T Consensus 183 Yl~~g~~~---~gI~~~eL~~d~~~~~~~~~~~~~i~-~g~~~~~EGP~i~~~K~~G-------------~YYL~~S~g~ 245 (470)
T 2x8s_A 183 WMVYGSYS---GGIFILEMNPKTGFPLPGQGYGKKLL-GGNHSRIEGPYVLYNPDTQ-------------YYYLYLSYGG 245 (470)
T ss_dssp EEEECBST---TCEEEEEBCTTTSSBCTTCTTCEEEE-CCSSCSEEEEEEEEETTTT-------------EEEEEEEESB
T ss_pred EEEeeecC---CcEEEEEECCccCcCcCCcccceEec-CCCCCceeccEEEEEccCC-------------EEEEEEEeCC
Confidence 99998642 23556653 332 11211111111 1123468999999643224 8999998643
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=7.5e-08 Score=106.21 Aligned_cols=169 Identities=9% Similarity=0.079 Sum_probs=108.7
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC---C---------ccCCCeEeeeEEEcC-CC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK---P---------FDINGCWSGSATVLP-GN 128 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~---~---------~D~~gv~SGsav~~~-dg 128 (574)
.++.++|+|+||-..... ...+....|+||+||+..+.+|.... . ....++|.+++.... +|
T Consensus 21 ~iir~~~~YY~~~st~~~-----~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~WAP~i~~~~~~G 95 (542)
T 3zxk_A 21 EVFRVGSVFYYSSSTFAY-----SPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGAYVKGIWASTLRYRRSND 95 (542)
T ss_dssp EEEEETTEEEEECCCBTE-----ESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTTTTCSBCSCEEEEETTTT
T ss_pred eEEEECCEEEEEEecCcc-----CCCeEEEEcCCCCCccccccccccCCccccccccCCcccccCCceECCcEEEECCCC
Confidence 578889999999532111 12477889999999999988875421 0 113689999997742 49
Q ss_pred eeEEEEeeecCCCcceEEEEEecCCCCcc-----cce---eeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEe
Q 008189 129 KPIILYTGVDHKERQVQNYAVPANPSDPY-----LRK---WIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVG 200 (574)
Q Consensus 129 ~~~l~YTg~~~~~~~~q~lA~s~D~~d~~-----l~~---w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g 200 (574)
++||+|+.. ..+++|++++..+|+ |++ |++ |+... ....||.++++ ++|+.||++|
T Consensus 96 ~fYly~~~~-----~~~~v~~a~~p~GPf~~g~~l~~~~~ws~----~~~~~------~~~iDp~~f~D-dDG~~Yl~~g 159 (542)
T 3zxk_A 96 RFYWYGCVE-----GRTYLWTSPGGNALANNGEVPPSAWNWQH----TATID------NCYYDAGLLID-DDDTMYIAYG 159 (542)
T ss_dssp EEEEEEEET-----TEEEEEEEECTTGGGTTTCCCGGGCCCEE----EEEES------SCCTTCEEEEC-TTSCEEEEEC
T ss_pred EEEEEEECC-----CcEEEEEECCCCCCccccccccccCcccc----ccccC------CCCCCCcEEEc-CCCCEEEEEc
Confidence 999999864 367889998875442 000 443 11111 23469997655 7999999997
Q ss_pred eecCCeeEEEEEE-eCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 201 SRRKHRGMAYLYR-SRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 201 ~~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.. .|.+.+ ++|+..=.-....+.....+...|-|-+++.+ | +++|++|...
T Consensus 160 ~~-----~i~~~eL~~d~~~~~~~~~~i~~~~~g~~~EgP~i~k~~--G-------------~YYL~~s~~~ 211 (542)
T 3zxk_A 160 NP-----TINVAQLSPDGTRQVRVQQRVYAHPQGQTVEGARMYKIR--G-------------NYYILVTRPA 211 (542)
T ss_dssp SS-----SEEEEEECTTSSSEEEEEEEEECCTTCCCCEEEEEEEET--T-------------EEEEEEEETT
T ss_pred CC-----CEEEEEeCCccCcccCCcEEEEeCCCCccccccEEEEEC--C-------------EEEEEEEeCC
Confidence 42 355555 55653322111112222233478999999987 6 8899888643
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=3.8e-08 Score=106.83 Aligned_cols=175 Identities=15% Similarity=0.120 Sum_probs=113.4
Q ss_pred eeEE-ECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceeccccc--CCC-CCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMY-YKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAL--YPS-KPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~-~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al--~P~-~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.+++ .+|+|+||+.... ..++..++|+||+||+..+.++ .+. ......++|.+.++. .+|++||||+..
T Consensus 23 ~iir~~dg~YY~~~T~~~------~~~i~i~~S~DLv~W~~~~~~~~w~~~~~~~~~~~~WAP~v~~-~~Gkyylyys~~ 95 (468)
T 3akh_A 23 HIFKHTDGYYYFTATVPE------YDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHF-IDGKWYVYFAAG 95 (468)
T ss_dssp EEEECTTSCEEEEEECTT------CCEEEEEEESSTGGGGGCCCEEEEECCSSSTTCEEEEEEEEEE-ETTEEEEEEEEE
T ss_pred EEEEecCCEEEEEEEeCC------CCCEEEEECCCccccccCCCcceecCCCCCCCCCCEecceEEE-ECCEEEEEEEeE
Confidence 5666 4899999987531 2468999999999999886433 221 122346799999987 489999999987
Q ss_pred cCCC--cceEEEEE--ecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC---CeeEEE
Q 008189 138 DHKE--RQVQNYAV--PANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK---HRGMAY 210 (574)
Q Consensus 138 ~~~~--~~~q~lA~--s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~---~~G~i~ 210 (574)
.... ...+++|+ +.|. .-..|+.. +.++.+. + ....||.+++ .+|++||+++.... ..+.|.
T Consensus 96 ~~~~~~~~~i~va~~~s~dp---~~Gpw~~~--g~~~~~~-~---~~~IDp~vf~--ddG~~Yl~~g~~~~~~~~~~~i~ 164 (468)
T 3akh_A 96 STSDVWAIRMYVLESGAANP---LTGSWTEK--GQIATPV-S---SFSLDATTFV--VNGVRHLAWAQRNPAEDNNTSLF 164 (468)
T ss_dssp CSSCTTCCEEEEEEECCSCT---TTSCCEEE--EECCCSS-C---SCEEEEEEEE--ETTEEEEEEEECCTTSSSSBEEE
T ss_pred CCCCCCceeEEEEEccCCCC---CCCCCccc--ceeecCC-C---CCcCcCeEEE--ECCEEEEEEEccCCCCCCCCcEE
Confidence 5322 34566776 5553 01368763 2233221 1 2457999654 58999999986431 224577
Q ss_pred EEEeCCCCCCEEcccc--cccCC------CCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 211 LYRSRDFMKWTKAKHP--IHSLA------NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 211 ly~S~Dl~~W~~~~~~--l~~~~------~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
+.+.+|. |+..+.+ +..++ .....|-|.+++.+ | +++|++|...
T Consensus 165 i~~l~~~--~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~--G-------------~YYL~ys~~g 216 (468)
T 3akh_A 165 IAKMANP--WTISGTPTEISQPTLSWETVGYKVNEGPAVIQHG--G-------------KVFLTYSASA 216 (468)
T ss_dssp EEEEEET--TEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred EEEeCCC--ceecCccEEecCCCcccccCCCccccCCEEEEEC--C-------------EEEEEEEeCC
Confidence 7776663 6655542 21121 12367999999976 5 8999998754
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.3e-07 Score=94.54 Aligned_cols=180 Identities=14% Similarity=0.141 Sum_probs=107.4
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccc--c-CCCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPA--L-YPSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~a--l-~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.++.+++.|+||+...+..+ .+....|+||++|+..+.. + .+...+...++|.+.++. .+|++||||+...
T Consensus 21 ~ii~~~d~yY~~~st~~~~~-----g~~i~~S~DL~~w~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yylyys~~~ 94 (330)
T 3k1u_A 21 MIYKHNDGYYYFTASVPEYD-----RIEVRKAKTIEGLRNAEPVDVWRRHESGEMSNLIWAPEIHF-INGAWYIYFAAAP 94 (330)
T ss_dssp EEEECTTSCEEEEEECTTCC-----EEEEEEESSTGGGTTSCCEEEEECCSSSTTSEEEEEEEEEE-ETTEEEEEEEEES
T ss_pred EEEEECCEEEEEEeccCCCC-----CEEEEEcCCcCCccCCcceeecccCCCCccCCCeECCEEEE-ECCeEEEEEEecc
Confidence 57788999999998765433 5777889999999976432 2 223333446799999987 5999999999764
Q ss_pred CCC-----cceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec--CCeeEEEE
Q 008189 139 HKE-----RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR--KHRGMAYL 211 (574)
Q Consensus 139 ~~~-----~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~--~~~G~i~l 211 (574)
... ......+++.+..++.-..|+.. ..+....+ ..--||.|+++ .+++|+|+.+... ...+.|.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~---~~~~~~~~---~~~IDp~vf~D-dd~~~~~~~~~~~~~~~~~~i~i 167 (330)
T 3k1u_A 95 DKNIEDDTFNHRMFVIQNENENPFTGNWVEK---GRIKTAWE---SFSLDATIFEH-NEKLYYVWAQQDINIKGHSNIYI 167 (330)
T ss_dssp SSCCBTTBCCCEEEEEEECSSSTTSSCCEEE---EECCCSSC---SCEEEEEEEEE-TTEEEEEEEECCTTSSSSBEEEE
T ss_pred CCCCCCcccceeeeEEEeCCCCCcccccccc---ccccCCCC---CCccCceEEEE-CCccEEEEeecCCCcCCCceEEE
Confidence 321 11233455444434432345431 11111111 23469996544 6777777665432 22335666
Q ss_pred EEeCCCCCCEEcccc--cccCC------CCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 212 YRSRDFMKWTKAKHP--IHSLA------NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 212 y~S~Dl~~W~~~~~~--l~~~~------~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
.+-++- ++..+++ +..+. .....|-|.+++.+ | +++|++|...
T Consensus 168 ~~l~~~--~~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~--G-------------~YYL~ys~~~ 218 (330)
T 3k1u_A 168 AEMENP--WTLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN--G-------------KIFITYSASA 218 (330)
T ss_dssp EEEEET--TEECSCCEEEECSCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred EECCCC--ccccCCcEEecCCCccccccCCceeeCCEEEEEC--C-------------EEEEEEEeCC
Confidence 664332 4444432 11111 12356999999986 5 8999998754
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.1e-06 Score=89.95 Aligned_cols=146 Identities=12% Similarity=0.040 Sum_probs=95.0
Q ss_pred eeEEE----CCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcC-CCeeEEEEe
Q 008189 62 GPMYY----KGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLP-GNKPIILYT 135 (574)
Q Consensus 62 g~~~~----~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~-dg~~~l~YT 135 (574)
.++++ +|+|||||..+.... +....++|+|+|.. .|++++..|..........+..++++.++ ||++||+|.
T Consensus 81 ~v~~~~~~~~Gkyylyyt~~~~~~--~~~~i~va~s~~p~Gpw~~~~~p~~~~~~~g~~~~iDp~vf~dd~dG~~yl~~g 158 (311)
T 3qz4_A 81 CIEEKKIDGKYKYFFYYSANPTTN--KGKQIGVAVADSPTGPFTDLGKPIITSSPTGRGQQIDVDVFTDPVSGKSYLYWG 158 (311)
T ss_dssp EEEEEEETTEEEEEEEEEEEETTC--SSCEEEEEEESSTTCCCEECSSCSBCSCTTSSSBSCCCEEEECTTTCCEEEEEC
T ss_pred eeEEeeecCCCEEEEEEEeccCCC--CCeeEEEEEECCCCCCceECCcceEcCCCCCCcccccccEEEECCCCcEEEEEc
Confidence 66788 999999999875432 24679999999986 99997643333221111346788998876 899999997
Q ss_pred eecCCCcceEEEEE-ecCCCCcccceeeccCCCceEecCCCC---CCcCccCCeeEEecCCCeEEEEEeeecCCe--eEE
Q 008189 136 GVDHKERQVQNYAV-PANPSDPYLRKWIKPDNNPVVFPGPDV---NASAFRDPTTAWWSNDGHWRMLVGSRRKHR--GMA 209 (574)
Q Consensus 136 g~~~~~~~~q~lA~-s~D~~d~~l~~w~k~~~~Pvi~~~~~~---~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~--G~i 209 (574)
+. .+.++. +.| +.+|... ...++. +.+. ....+.-|++ ++ .+|+|||++++..... -++
T Consensus 159 ~~------~i~~~~l~~d-----~~~~~~~-~~~i~~-~~~~~~~~~~~~EgP~i-~k-~~g~YyL~~s~~~~~~~~y~~ 223 (311)
T 3qz4_A 159 NG------YMAGAELNDD-----MLSIKEE-TTVVLT-PKGGTLQTYAYREAPYV-IY-RKGIYYFFWSVDDTGSPNYHV 223 (311)
T ss_dssp BS------SCEEEEBCTT-----SSSBCGG-GCEECC-CCCCCTTTTCCCEEEEE-EE-ETTEEEEEEEESCTTSTTCEE
T ss_pred CC------CEEEEEeCCc-----ccccCCC-ceEEeC-CCCCcccccceeeccEE-EE-ECCEEEEEEEcCCCCCCCceE
Confidence 51 234444 444 2456542 123332 2221 1134578985 45 5899999998764221 168
Q ss_pred EEEEeCCCC-CCEEcc
Q 008189 210 YLYRSRDFM-KWTKAK 224 (574)
Q Consensus 210 ~ly~S~Dl~-~W~~~~ 224 (574)
.+++|+++. -|+..+
T Consensus 224 ~~~~S~~~~GPw~~~~ 239 (311)
T 3qz4_A 224 VYGTAQSPLGPIEVAK 239 (311)
T ss_dssp EEEEESSTTCCCEEEE
T ss_pred EEEEcCCCCCCCEeCC
Confidence 899999987 498864
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.55 E-value=3.9e-06 Score=85.77 Aligned_cols=145 Identities=14% Similarity=0.148 Sum_probs=93.2
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCCCccEEEEeecCCcC-Cceeccc-ccCCCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEP-ALYPSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~-al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.+++. +|+|||||..+ .+.++|+|+|.. .|++... .+.. .....++++.++||++||+|...
T Consensus 83 ~v~~~~~~g~~yl~yt~~--------~~i~va~s~~p~Gpw~~~~~~p~~~------~~~iDp~vf~D~dG~~Yl~~~~~ 148 (306)
T 3kst_A 83 EVYYVESKKKFYLFYSAE--------EHICVATSTTPEGPFRQEVKQPIWS------EKSIDTSLFIDDDGTPYLYFVRF 148 (306)
T ss_dssp EEEEETTTTEEEEEEEET--------TEEEEEEESSTTCCCBCSSCCCSSS------SCCEEEEEEECTTSCEEEEEEEE
T ss_pred eEEEECCCCEEEEEEECC--------CcEEEEEcCCCCCCcEeCCCccccC------CCcccceEEEeCCCCEEEEEEEe
Confidence 44477 99999999875 268999999986 8997532 1221 34678999987789999999754
Q ss_pred cCCCcceEEEEE-ecCCCCcccceeeccCCCceEecCCCCC---CcCccCCeeEEecCCCeEEEEEeeec--CCeeEEEE
Q 008189 138 DHKERQVQNYAV-PANPSDPYLRKWIKPDNNPVVFPGPDVN---ASAFRDPTTAWWSNDGHWRMLVGSRR--KHRGMAYL 211 (574)
Q Consensus 138 ~~~~~~~q~lA~-s~D~~d~~l~~w~k~~~~Pvi~~~~~~~---~~~fRDP~Vvw~~~~g~~~M~~g~~~--~~~G~i~l 211 (574)
.. .+.+.++. +.| +.+|.......++.+...++ ...+.-|.+ ++ .+|+|||++++.. ...-++.+
T Consensus 149 ~~--g~~i~~~~ls~d-----~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i-~k-~~G~YYL~~S~~~~~~~~y~v~~ 219 (306)
T 3kst_A 149 TD--GNVIWVAQMTDD-----LMSIKTETLNQCIKAEVSWELLQGKVAEGPSL-LK-KNGVYYLIYSANHYENKGYGVGY 219 (306)
T ss_dssp SS--SEEEEEEEBCTT-----SSCBCGGGCEEEECCCSGGGCSSSSBEEEEEE-EE-ETTEEEEEEEESCTTSTTCEEEE
T ss_pred CC--CCEEEEEEeCcc-----cccccCcceeeeccCCccceecCCCceecceE-EE-ECCEEEEEEEeCCCCCCCceEEE
Confidence 32 23344554 333 35665432222332222121 234567885 45 5899999997653 22226889
Q ss_pred EEeCCCC-CCEE-ccccccc
Q 008189 212 YRSRDFM-KWTK-AKHPIHS 229 (574)
Q Consensus 212 y~S~Dl~-~W~~-~~~~l~~ 229 (574)
++|+++. -|+. .+.++..
T Consensus 220 a~S~s~~GPw~~~~~~pil~ 239 (306)
T 3kst_A 220 ATSDTPMGPWVKYSKNPLLQ 239 (306)
T ss_dssp EEESSTTCCCEECTTCCSBS
T ss_pred EEeCCCCCCCEeCCCCeeEe
Confidence 9999986 7998 4456554
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=98.44 E-value=3.5e-06 Score=85.42 Aligned_cols=147 Identities=14% Similarity=0.197 Sum_probs=94.4
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcC--CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI--NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv--~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.+++++|+|||||..+..+. .....++|+|+|+. .|++++..|..... +...+..++++.++||+.||+|.+..
T Consensus 77 ~v~~~~G~yylyyt~~~~~~--~~~~i~va~s~~p~~Gpw~~~~~~l~~~~~-~~~~~iDp~vf~d~dG~~Yl~~g~~~- 152 (293)
T 1uv4_A 77 DIQYYNGKYWLYYSVSSFGS--NTSAIGLASSTSISSGGWKDEGLVIRSTSS-NNYNAIDPELTFDKDGNPWLAFGSFW- 152 (293)
T ss_dssp EEEEETTEEEEEEEECCTTC--SCEEEEEEEESCTTTTCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEECBST-
T ss_pred eEEEECCEEEEEEEecCCCC--CcceEEEEECCCCCCCCCccCCccEecCCC-CCCCCCCCCeEECCCCCEEEEEEecC-
Confidence 67788999999999765432 35678999999987 99987654433221 12345688898877899999997542
Q ss_pred CCcceEEEEEe-cCCCCcccceeeccCCCc--eEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEEEE
Q 008189 140 KERQVQNYAVP-ANPSDPYLRKWIKPDNNP--VVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGMAYL 211 (574)
Q Consensus 140 ~~~~~q~lA~s-~D~~d~~l~~w~k~~~~P--vi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~~G~i~l 211 (574)
..+.++.. .|. .++. +.| ++..+. ....+..|.+ ++ .+|+|||++++.. +..-++.+
T Consensus 153 ---~~i~~~~l~~d~-----~~~~---g~~~~i~~~~~--~~~~~EgP~i-~k-~~g~yyL~~s~~~~~~g~~~~y~~~~ 217 (293)
T 1uv4_A 153 ---SGIKLTKLDKST-----MKPT---GSLYSIAARPN--NGGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYKIAY 217 (293)
T ss_dssp ---TCEEEEEECTTT-----CSEE---EEEEEEECCTT--TTTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEEEEE
T ss_pred ---CCEEEEEECchh-----CccC---CcceEEeecCC--CCCccCccEE-EE-ECCEEEEEEEeCCCcCCCCCcceEEE
Confidence 23445543 332 2222 123 222221 1245678995 45 5899999988752 22236889
Q ss_pred EEeCCCC-CCEEc-cccc
Q 008189 212 YRSRDFM-KWTKA-KHPI 227 (574)
Q Consensus 212 y~S~Dl~-~W~~~-~~~l 227 (574)
++|+++. -|+.. +.++
T Consensus 218 ~~s~~~~GP~~~~~~~p~ 235 (293)
T 1uv4_A 218 GRSKSITGPYLDKSGKSM 235 (293)
T ss_dssp EEESSTTCCCBCTTSCBG
T ss_pred EEeCCCCCCCCccCCCee
Confidence 9999875 57764 4444
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=98.28 E-value=4.1e-05 Score=78.31 Aligned_cols=152 Identities=14% Similarity=0.193 Sum_probs=92.3
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCc---CC---ceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL---IN---WEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl---v~---W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+|||||..+..+. .....|+|+|+|+ -. |++.+..+.... .+......++++.+.||+.||+|.
T Consensus 86 ~v~~~~g~yylyyt~~~~~~--~~~~igva~s~~~dP~gp~~~w~~~~~~~~~~~-~~~~~~iDp~vf~D~dG~~Yl~~g 162 (314)
T 3cu9_A 86 DICFYNGIYYLYYSVSTFGK--NTSVIGLATNQTLDPRDPDYEWKDMGPVIHSTA-SDNYNAIDPNVVFDQEGQPWLSFG 162 (314)
T ss_dssp EEEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECT-TSSSCCCSCEEEECTTSCEEEEEC
T ss_pred cEEEECCEEEEEEEeccCCC--CCceEEEEEeCCCCCCCCCcCcccCCeEecCCC-CCCCCccCCCeEEcCCCCEEEEEe
Confidence 56778999999999875432 3467899999884 23 998765443211 122345688998877899999998
Q ss_pred eecCCCcceEEEEEecCCCCcccceeeccCCCce-EecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEE
Q 008189 136 GVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPV-VFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGMA 209 (574)
Q Consensus 136 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pv-i~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~~G~i 209 (574)
+.. ..+.++...+.. ..... ...++ +... +.....+..|.+ ++ .+|+|||++++.. +..-++
T Consensus 163 ~~~----~~i~~~~l~~d~----~~~~~-~~~~~~~~~~-~~~~~~~EgP~i-~k-~~G~yyL~~s~~~~~~g~~~~y~~ 230 (314)
T 3cu9_A 163 SFW----SGIQLIQLDTET----MKPAA-QAELLTIASR-GEEPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGIESTYKI 230 (314)
T ss_dssp BST----TCEEEEECCTTT----CSCCT-TCCCEEEECC-SSSSCCEEEEEE-EE-ETTEEEEEEEESCCSSGGGCCCEE
T ss_pred ccC----CcEEEEEECccc----CcccC-CCceEEeccc-CCCCCccCccEE-EE-ECCEEEEEEEcCCcccCCCCcceE
Confidence 743 134455433221 11110 01122 2211 111245678985 45 5899999987641 122268
Q ss_pred EEEEeCCCC-CCEEc-ccccc
Q 008189 210 YLYRSRDFM-KWTKA-KHPIH 228 (574)
Q Consensus 210 ~ly~S~Dl~-~W~~~-~~~l~ 228 (574)
.+++|+++. -|+.. +.++.
T Consensus 231 ~~~~s~s~~GP~~~~~~~p~~ 251 (314)
T 3cu9_A 231 AVGRSKDITGPYVDKNGVSMM 251 (314)
T ss_dssp EEEEESSTTSCCBCTTSCBGG
T ss_pred EEEEeCCCCCCCCcCCCCccc
Confidence 899999975 68765 44554
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=6.7e-06 Score=88.19 Aligned_cols=128 Identities=6% Similarity=-0.012 Sum_probs=87.9
Q ss_pred eeEEECCEEEEEEeeCCC-CCC-CCccEEEEeecCCcCCcee--cccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPK-GAV-WGNIVWAHSVSKDLINWEA--LEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~-~~~-~g~~~Wgha~S~Dlv~W~~--~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.++.++|+|+|||..+.. ... ......++|+|+|+.+|++ ..++|.+.......+.-.++++. .+|+++|++.+.
T Consensus 77 sav~~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~-~dg~~~m~~g~~ 155 (432)
T 1w2t_A 77 SAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVLGSG 155 (432)
T ss_dssp EEEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-CSSSEEEEEEEE
T ss_pred EEEEECCEEEEEEecCccCCCCCCceEEEEEEEeCCCCeEEecCCCceEeCCCccccccccCCEEEE-ECCEEEEEEEEe
Confidence 455689999999987643 111 2346789999999999998 45556443211123466788776 489999999876
Q ss_pred cCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 138 DHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 138 ~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
.........++.|.|. ++|+.. +++... .+ ...+.-|.+ ++ .+|+|+|+++.+
T Consensus 156 ~~~~~g~i~ly~S~Dl-----~~W~~~--g~~~~~-~~--g~~~EcP~l-f~-~~g~~vL~~s~~ 208 (432)
T 1w2t_A 156 KDEKIGRVLLYTSDDL-----FHWKYE--GAIFED-ET--TKEIDCPDL-VR-IGEKDILIYSIT 208 (432)
T ss_dssp ETTTEEEEEEEEESSS-----SSCEEE--EEEEEE-TT--CSCCEEEEE-EE-ETTEEEEEEEET
T ss_pred cCCCCcEEEEEECCCC-----CCceEc--cccccC-CC--CCEEECCeE-EE-ECCEEEEEEeCC
Confidence 4333456778888874 899875 455533 21 246789995 45 579999999875
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.5e-05 Score=81.77 Aligned_cols=158 Identities=10% Similarity=0.107 Sum_probs=94.4
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCc--CC----ceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL--IN----WEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl--v~----W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+|||||..+..+. .....|+|+|+|+ .. |++.+..+.+....+......++++.+.||+.||+|.
T Consensus 68 ~v~~~~g~~ylyyt~~~~~~--~~~~igva~s~~~dp~gp~~~w~~~~~v~~~~~~~~~~~~iDp~vf~D~dG~~Yl~~g 145 (318)
T 1gyh_A 68 DIYQHKGLFYLYYSVSAFGK--NTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWMSFG 145 (318)
T ss_dssp EEEEETTEEEEEEEECCTTS--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEEEEC
T ss_pred eEEEECCEEEEEEEeccCCC--CcceEEEEEeCCCCCCCCCcceecCCcccccCCCCCCCCcccCCeEECCCCCEEEEee
Confidence 67788999999999775432 3467899999883 23 9987655543222233346789998877899999997
Q ss_pred eecCCCcceEEEEEe-cCCC-CcccceeeccCC--Cce-EecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CC
Q 008189 136 GVDHKERQVQNYAVP-ANPS-DPYLRKWIKPDN--NPV-VFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KH 205 (574)
Q Consensus 136 g~~~~~~~~q~lA~s-~D~~-d~~l~~w~k~~~--~Pv-i~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~ 205 (574)
+.. ..+.++.. .|.. -..+.+|+.... .++ +... ......+.-|.+ ++ .+|+|||++++.. +.
T Consensus 146 ~~~----~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~-~~~~~~~EgP~i-~k-~~g~yYL~~s~~~~~~g~~~ 218 (318)
T 1gyh_A 146 SFW----GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDS-QAGSAQIEAPFI-LR-KGDYYYLFASWGLCCRKGDS 218 (318)
T ss_dssp BST----TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTT-SCCSCCEEEEEE-EE-ETTEEEEEEEESCCSCGGGC
T ss_pred ccC----CCEEEEEeCCccccccceeecceecccCcceeeccc-CCCCcceeccEE-EE-ECCEEEEEEEeCCCcCCCCC
Confidence 642 13445543 3310 001234543211 111 1110 111235678885 45 5899999987641 22
Q ss_pred eeEEEEEEeCCCC-CCEEc-ccccc
Q 008189 206 RGMAYLYRSRDFM-KWTKA-KHPIH 228 (574)
Q Consensus 206 ~G~i~ly~S~Dl~-~W~~~-~~~l~ 228 (574)
.-++.+++|+++. -|+.. +.++.
T Consensus 219 ~y~~~~~rS~s~~GP~~~~~g~p~~ 243 (318)
T 1gyh_A 219 TYHLVVGRSKQVTGPYLDKTGRDMN 243 (318)
T ss_dssp CCEEEEEEESSTTSCCBCTTSBBGG
T ss_pred cceEEEEEcCCCCCCCCcCCCCEee
Confidence 2368899999875 67764 44543
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8.8e-05 Score=75.71 Aligned_cols=141 Identities=8% Similarity=-0.027 Sum_probs=89.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCc-CCcee-cccccCCCC----CccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL-INWEA-LEPALYPSK----PFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl-v~W~~-~~~al~P~~----~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+|||||..+..+..+ ....++|+|+|. -.|++ .+..|.... .........++++.++||++||+|.
T Consensus 79 ~i~~~~Gkyylyyt~~~~~~~~-~~~i~va~s~~p~Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf~DddG~~Yl~~g 157 (307)
T 3qee_A 79 QVIERNGKFYWYVTVRHDDTKP-GFAIGVAVGDSPIGPFKDALGKALITNDMTTDTPIDWDDIDPSVFIDDDGQAYLFWG 157 (307)
T ss_dssp EEEEETTEEEEEEEEEECTTSC-SEEEEEEEESSTTCCCEESSSSCSBCGGGCCSSCCSCCSCCCEEEECTTSCEEEEEC
T ss_pred eEEEECCEEEEEEEeccCCCCC-ceEEEEEEECCCCCCCEeCCCCeeEecCccccCCCCcCcccCceEECCCCCEEEEEe
Confidence 6678899999999987544322 367999999995 48998 343322210 0011235788998877899999997
Q ss_pred eecCCCcceEEEE-EecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe
Q 008189 136 GVDHKERQVQNYA-VPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRS 214 (574)
Q Consensus 136 g~~~~~~~~q~lA-~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S 214 (574)
+.. ..++ .+.|. .+|.. .+...... ...+.-|.+ ++ .+|+|||++++.. .-++.+++|
T Consensus 158 ~~~------i~~~~l~~d~-----~~~~g---~~~~i~~~---~~~~EgP~i-~k-~~g~YyL~~s~~~--~~~~~~~~s 216 (307)
T 3qee_A 158 NTR------PRYAKLKKNM-----VELDG---PIRAIEGL---PEFTEAIWV-HK-YQDNYYLSYAMGF--PEKIGYAMG 216 (307)
T ss_dssp SSS------CEEEEECTTS-----SSEEE---EEEECCCC---TTEEEEEEE-EE-CC-CEEEEEEETT--TTEEEEEEE
T ss_pred CCc------EEEEEECCcc-----ccccC---ceEEeCCC---CCccCceEE-EE-ECCEEEEEEECCC--CcEEEEEEC
Confidence 531 2233 34442 55543 22221111 134578884 56 6999999998752 236788899
Q ss_pred CCCC-CCEEcc
Q 008189 215 RDFM-KWTKAK 224 (574)
Q Consensus 215 ~Dl~-~W~~~~ 224 (574)
+++. -|+..+
T Consensus 217 ~~~~GP~~~~~ 227 (307)
T 3qee_A 217 KSIKGPWVYKG 227 (307)
T ss_dssp SSTTCCCEEEE
T ss_pred CCCCCCcEECC
Confidence 9986 798764
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=9.7e-05 Score=79.96 Aligned_cols=153 Identities=12% Similarity=0.130 Sum_probs=95.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEee--cCCc--CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSV--SKDL--INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~--S~Dl--v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.++|++|+|||||.....+.. .....+.|+ |+|- -.|++++..+.|.. ..+..++++. .||++||+|.+.
T Consensus 80 ~v~~~~Gkyylyys~~~~~~~-~~~~i~va~~~s~dp~~Gpw~~~g~~~~~~~----~~~IDp~vf~-ddG~~Yl~~g~~ 153 (468)
T 3akh_A 80 EIHFIDGKWYVYFAAGSTSDV-WAIRMYVLESGAANPLTGSWTEKGQIATPVS----SFSLDATTFV-VNGVRHLAWAQR 153 (468)
T ss_dssp EEEEETTEEEEEEEEECSSCT-TCCEEEEEEECCSCTTTSCCEEEEECCCSSC----SCEEEEEEEE-ETTEEEEEEEEC
T ss_pred eEEEECCEEEEEEEeECCCCC-CceeEEEEEccCCCCCCCCCcccceeecCCC----CCcCcCeEEE-ECCEEEEEEEcc
Confidence 667889999999987653221 245567765 8886 48999876665532 3578899988 699999999875
Q ss_pred cCC--CcceEEEEEecCCCCcccceeeccCCCceE-ecC-CCCCC---cCccCCeeEEecCCCeEEEEEeeec-CCeeEE
Q 008189 138 DHK--ERQVQNYAVPANPSDPYLRKWIKPDNNPVV-FPG-PDVNA---SAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMA 209 (574)
Q Consensus 138 ~~~--~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi-~~~-~~~~~---~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i 209 (574)
... ....+.+|..++. .+.. +.|+. ..+ ..++. ....-|++ ++ .+|.|||++++.. +..-++
T Consensus 154 ~~~~~~~~~i~i~~l~~~-----~~~~---g~~~~i~~~~~~we~~g~~~~EGP~i-~k-~~G~YYL~ys~~g~~~~y~v 223 (468)
T 3akh_A 154 NPAEDNNTSLFIAKMANP-----WTIS---GTPTEISQPTLSWETVGYKVNEGPAV-IQ-HGGKVFLTYSASATDANYCL 223 (468)
T ss_dssp CTTSSSSBEEEEEEEEET-----TEEE---EEEEEEECCCSGGGCSSSCBEEEEEE-EE-ETTEEEEEEEESCSSTTCEE
T ss_pred CCCCCCCCcEEEEEeCCC-----ceec---CccEEecCCCcccccCCCccccCCEE-EE-ECCEEEEEEEeCCCCCCceE
Confidence 321 2245566665442 2222 23332 222 11211 23567885 45 5899999988653 222267
Q ss_pred EEEEeC---CCCC---CEEcccccccC
Q 008189 210 YLYRSR---DFMK---WTKAKHPIHSL 230 (574)
Q Consensus 210 ~ly~S~---Dl~~---W~~~~~~l~~~ 230 (574)
.+++|+ ++.. |+..+.++...
T Consensus 224 ~~a~s~~~~~~~gP~~w~~~~~pvl~~ 250 (468)
T 3akh_A 224 GMLSASASADLLNAASWTKSSQPVFKT 250 (468)
T ss_dssp EEEEEETTSCTTSGGGCEECSSCSBCC
T ss_pred EEEEECCCCCCCCcHHhccCCceEEEe
Confidence 888987 6654 98876566543
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00034 Score=77.00 Aligned_cols=149 Identities=13% Similarity=0.211 Sum_probs=91.8
Q ss_pred eeEEECCEEEEEEeeCCC-CCCCCccEEEEeecCCcCC-ceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPK-GAVWGNIVWAHSVSKDLIN-WEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~-~~~~g~~~Wgha~S~Dlv~-W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.++|++|+|||||..... +..+.....++|+|+|... |++ |+.+. ...+.++++.++||+.||+|.....
T Consensus 76 ~i~~~~g~~yly~t~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~~-------~~~iDp~~f~DddG~~Yl~~~~~~~ 147 (538)
T 3c2u_A 76 DLSYADGKFWLIYTDVKVVDGMWKDCHNYLTTAEDIKGPWSK-PILLN-------GAGFDASLFHDPSGKKYLVNMYWDQ 147 (538)
T ss_dssp EEEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTCCCCC-CEEEE-------CSCSCCEEEECTTSCEEEEEEEECC
T ss_pred eEEEECCEEEEEEEeccCCCCCcccccEEEEEECCCCCCccc-cEecC-------CCcCCCeeEECCCCCEEEEEEecCC
Confidence 678899999999985432 2223356789999999874 986 33331 1346788988778999999985432
Q ss_pred C----CcceEEEEEecCCCCcccceeeccCCCc-eEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEE
Q 008189 140 K----ERQVQNYAVPANPSDPYLRKWIKPDNNP-VVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYR 213 (574)
Q Consensus 140 ~----~~~~q~lA~s~D~~d~~l~~w~k~~~~P-vi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~ 213 (574)
. ....+.++..++.. . +- .+.+ .|..+.+ .....-|++ ++ .+|.|||++++.. ...-++.+++
T Consensus 148 ~~~~~~~~~i~~~~l~~d~----~--~~-~g~~~~i~~~~~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~~~~~~~~~r 216 (538)
T 3c2u_A 148 RVYHHNFYGIALQEYSVAE----E--KL-IGKPEIIYKGTD--IAYTEGPHL-YY-INDMYYLMTAEGGTTYQHSETIAR 216 (538)
T ss_dssp CTTSCSEEEEEEEEEETTT----T--EE-CSCCEEEECCCT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTTCEEEEEE
T ss_pred ccCCCCCCCEEEEEECCcc----C--CC-CCCCEEEecCCC--CCccccceE-EE-ECCEEEEEEecCCCCCCeEEEEEE
Confidence 1 12344455433211 1 11 1222 2222221 235678995 55 5999999988653 2122688999
Q ss_pred eCCCC-CCEEcc-ccccc
Q 008189 214 SRDFM-KWTKAK-HPIHS 229 (574)
Q Consensus 214 S~Dl~-~W~~~~-~~l~~ 229 (574)
|+++. -|+... .|+..
T Consensus 217 S~s~~GP~~~~~~~pil~ 234 (538)
T 3c2u_A 217 SKTIHGPYEIQPDYPLLS 234 (538)
T ss_dssp ESSTTCCCEECTTCCSBC
T ss_pred ECCCCCCCccCCCCceEe
Confidence 99986 788764 34443
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00035 Score=76.73 Aligned_cols=149 Identities=15% Similarity=0.150 Sum_probs=92.1
Q ss_pred eeEEECCEEEEEEeeCCC-CCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPK-GAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~-~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.++|++|+|||||..... +..+...+.+.|+|+|.. .|++ |+.+. ...+.++++.++||+.||+|.+...
T Consensus 76 ~i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~~-------~~~iDp~~f~D~dG~~Yl~~~~~~~ 147 (533)
T 1yif_A 76 CLSYSDGKFWLIYTDVKVVDGAWKDCHNYLVTCETINGDWSE-PIKLN-------SSGFDASLFHDTDGKKYLLNMLWDH 147 (533)
T ss_dssp EEEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECC-------CSCSCCEEEECTTSCEEEEEEEECC
T ss_pred eEEEECCEEEEEEEeccCCCCCcccccEEEEEeCCCCCCccc-cEEcC-------CCcCCCceEECCCCCEEEEEEeccc
Confidence 678899999999985432 223345678999999986 7987 33331 1246789988789999999985431
Q ss_pred -CC---cceEEEEE-ecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEE
Q 008189 140 -KE---RQVQNYAV-PANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYR 213 (574)
Q Consensus 140 -~~---~~~q~lA~-s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~ 213 (574)
.+ ...+.++. +.|. .+... +...|+... + .....-|++ ++ .+|+|||+++++. ...-++.+++
T Consensus 148 ~~g~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~~~-~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~~~~~v~~~r 216 (533)
T 1yif_A 148 RIDRHSFGGIVIQEYSDKE-----QKLIG-KPKVIFEGT-D--RKLTEAPHL-YH-IGNYYYLLTAEGGTRYEHAATIAR 216 (533)
T ss_dssp CTTSCSEEEEEEEEEETTT-----TEECS-CCEEEECCC-T--TCCCEEEEE-EE-ETTEEEEEEEESCSSTTCEEEEEE
T ss_pred ccCCCCCCCEEEEEECCcc-----CCCCC-CcEEEEcCC-C--CCccccceE-EE-ECCEEEEEEeCCCCCCCeEEEEEE
Confidence 11 23344554 3332 22211 112233221 1 235678985 45 5899999988653 2222688999
Q ss_pred eCCCC-CCEEcc-ccccc
Q 008189 214 SRDFM-KWTKAK-HPIHS 229 (574)
Q Consensus 214 S~Dl~-~W~~~~-~~l~~ 229 (574)
|+++. -|+... .|+..
T Consensus 217 s~s~~GP~~~~~~~pil~ 234 (533)
T 1yif_A 217 SANIEGPYEVHPDNPILT 234 (533)
T ss_dssp ESSTTCCCEECTTCCSEE
T ss_pred ECCCCceeeeCCCCceEe
Confidence 99875 688753 35443
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00019 Score=78.82 Aligned_cols=164 Identities=12% Similarity=0.083 Sum_probs=97.9
Q ss_pred eeEEE--CCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCCC---C----ccCCCeEeeeEEEcCCCeeE
Q 008189 62 GPMYY--KGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPSK---P----FDINGCWSGSATVLPGNKPI 131 (574)
Q Consensus 62 g~~~~--~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~---~----~D~~gv~SGsav~~~dg~~~ 131 (574)
.++|+ +|+|||||.... +..++..+.|+|+|+|.. .|++++. +.|-. . ++...+..+++++++||+.|
T Consensus 121 ~v~~~~~~Gkyymy~~~~~-~~~~~~~~igvats~~p~Gpw~~~g~-~~p~~~~g~~~~~~~~~~~iDp~vf~D~dG~~Y 198 (526)
T 3vsf_A 121 KVMYNASTGEFVMWMHWEN-GINYGQARAAVAYSKTPDGKFTYIRS-FRPMQDTGVMDHGLPGYMSRDCNVFVDTDGKGY 198 (526)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCSCCCEEEEEEESSSSSCCEEEEE-ECSSCTTCCEETTEESCCCCSEEEEECTTSCEE
T ss_pred EEEEECCCCEEEEEEEeeC-CCCCCcceEEEEEcCCCCCCCEeccc-cccccccccccCCCCCcccccccEEECCCCCEE
Confidence 45665 899999998762 233456789999999987 7997642 11211 1 11245678899888899999
Q ss_pred EEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCe-eEEE
Q 008189 132 ILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHR-GMAY 210 (574)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~-G~i~ 210 (574)
|+|.+... ....++...+. +..+.. .+...-+ + .....|++ ++ .+|+|||++.+..... ..+.
T Consensus 199 l~~~~~~~---~~i~i~~l~~d----~~~~~~---~~~~~~~-g---~~~EgP~i-~k-~~G~YYL~~S~~tg~~~~~~~ 262 (526)
T 3vsf_A 199 FISAANEN---MDLHLYELTPD----YKNIAS---LKAKLFV-G---QQREAPCL-IK-RNGYYYLITSGCTGWNPNQAK 262 (526)
T ss_dssp EEEEETTT---TEEEEEEECTT----SSSEEE---EEEEEST-T---SCCEEEEE-EE-SSSCEEEEEECCCTTSCCCEE
T ss_pred EEEEecCC---CceEEEEcCCC----cccccC---ceEEeCC-C---CCcCCeEE-EE-ECCEEEEEEcCCCCcCCCceE
Confidence 99986421 23444543322 133332 1221111 1 35678995 56 6899999997543211 2578
Q ss_pred EEEeCCCC-CCEEcccccccCCCCCccccceeEEec
Q 008189 211 LYRSRDFM-KWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 211 ly~S~Dl~-~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
+++|+++. -|+..+.+. ......-....++++.
T Consensus 263 ~a~S~s~~GPw~~~~~~~--~~~~~~~q~~~v~~~~ 296 (526)
T 3vsf_A 263 YAYSKDLASGWSQLYNLG--NSTTYRSQPTFIIPVQ 296 (526)
T ss_dssp ECEESCSSSCCCCCEEES--STTTTTCEEEEEEEEE
T ss_pred EEEeCCCCCCceeCCccC--CCCccCCCCeeEEEec
Confidence 89999875 577654432 1222233445555555
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00023 Score=78.07 Aligned_cols=150 Identities=14% Similarity=0.127 Sum_probs=91.4
Q ss_pred eeEEECCEEEEEEeeCCC-CCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPK-GAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~-~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.+++++|+|||||..... +..+...+.++|+|+|.. .|++ |..+ ....+.++++.++||+.||+|..+..
T Consensus 78 ~i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-------~~~~iDp~vf~D~dG~~Yl~~~~~~~ 149 (528)
T 1yrz_A 78 CLSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQNIEGPWSD-PIYL-------NSSGFDPSLFHDDDGRKWLVNMIWDY 149 (528)
T ss_dssp EEEEETTEEEEEEEEEEECSSSCCEEEEEEEEESSSSSCCCC-CEEC-------CCSCSCCEEEECTTSCEEEEEEEECC
T ss_pred eEEEECCEEEEEEecccCCCCCcccceEEEEEeCCCCCCccc-cEEC-------CCCcCCCceEECCCCCEEEEEeeccC
Confidence 678899999999985321 222334568899999987 5986 3323 12457889988779999999654321
Q ss_pred -C---CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEEe
Q 008189 140 -K---ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYRS 214 (574)
Q Consensus 140 -~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~S 214 (574)
. ....+.++..++.. .+.... ..+|+... ....+..|++ ++ .+|+|||+++++. ...-++.+++|
T Consensus 150 ~~~~~~~~~i~~~~l~~d~----~~~~g~-~~~i~~~~---~~~~~EgP~i-~k-~~G~YYL~~s~~g~~~~~~~~~~rs 219 (528)
T 1yrz_A 150 RKGNHPFAGIILQEYSEAE----QKLVGP-VKNIYKGT---DIQLTEGPHL-YK-KDGYYYLLVAEGGTEYEHAATLARS 219 (528)
T ss_dssp CTTSCSEEEEEEEEEETTT----TEEEEE-EEEEECCC---TTCCCEEEEE-EE-ETTEEEEEEEESCSSTTCEEEEEEE
T ss_pred CCCCCCCCeEEEEEECCcc----CCCCCC-CEEEEcCC---CCCccCCCEE-EE-ECCEEEEEEeCCCCCCCcEEEEEEE
Confidence 1 12344555533211 222211 11233211 1235678985 55 5899999998653 22225789999
Q ss_pred CCCC-CCEEcc-ccccc
Q 008189 215 RDFM-KWTKAK-HPIHS 229 (574)
Q Consensus 215 ~Dl~-~W~~~~-~~l~~ 229 (574)
+++. -|+... .++..
T Consensus 220 ~~~~GP~~~~~~~pil~ 236 (528)
T 1yrz_A 220 QSIDGPYETDPSYPLVT 236 (528)
T ss_dssp SSTTCCCEECTTCCSEE
T ss_pred CCCCCCCCcCCCCeEEE
Confidence 9986 798763 34443
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0011 Score=72.66 Aligned_cols=148 Identities=12% Similarity=0.105 Sum_probs=89.9
Q ss_pred eeEEECCEEEEEEeeCCC-CCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPK-GAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~-~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.++|++|+|||||..... ...+...+.+.|+|+|.. .|++ |+.+. .....++++.++||+.||+|.....
T Consensus 77 ~i~~~~g~~ylyyt~~~~~~g~~~~~~~~va~s~~~~Gpw~~-p~~~~-------~~~iDp~vf~DddG~~Yl~~~~~~~ 148 (535)
T 2exh_A 77 HLSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYLN-------SSGFDPSLFHDEDGRKYLVNMYWDH 148 (535)
T ss_dssp EEEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECC-------CSCSCCEEEECTTSCEEEEEEEECC
T ss_pred eEEEECCEEEEEEEeccCCCCCccccceEEEEeCCCCCCccc-cEecC-------CCcCCCceEECCCCCEEEEEEecCC
Confidence 678899999999985432 222334678999999975 6987 33231 2346789988778999999985432
Q ss_pred C-C---cceEEEEE-ecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEE
Q 008189 140 K-E---RQVQNYAV-PANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYR 213 (574)
Q Consensus 140 ~-~---~~~q~lA~-s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~ 213 (574)
. + ...+.++. +.|. +..... ...|+.+ .. .....-|++ ++ .+|+|||++++.. ...-++.+++
T Consensus 149 ~~~~~~~~~i~~~~l~~d~----~~~~g~--~~~i~~~-~~--~~~~EgP~i-~k-~~G~YYL~~s~ggt~~~~~~~~~r 217 (535)
T 2exh_A 149 RVDHHPFYGIVLQEYSVEQ----KKLVGE--PKIIFKG-TD--LRITEGPHL-YK-INGYYYLLTAEGGTRYNHAATIAR 217 (535)
T ss_dssp CTTSCSEEEEEEEEEETTT----TEEEEE--EEEEECC-CT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTTCEEEEEE
T ss_pred ccCCCCCCcEEEEEECCcc----CCCCCC--cEEEEcC-CC--CCccccceE-EE-ECCEEEEEEeCCCCCCCeEEEEEE
Confidence 1 1 12344454 3332 111111 1123322 11 235678985 45 5899999987653 2122688999
Q ss_pred eCCCC-CCEEcc-cccc
Q 008189 214 SRDFM-KWTKAK-HPIH 228 (574)
Q Consensus 214 S~Dl~-~W~~~~-~~l~ 228 (574)
|+++. -|+... .++.
T Consensus 218 s~s~~GP~~~~~~~pil 234 (535)
T 2exh_A 218 STSLYGPYEVHPDNPLL 234 (535)
T ss_dssp ESSTTCCCEECTTCCSE
T ss_pred eCCCCCCCccCCCcceE
Confidence 99875 687753 3444
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00033 Score=75.29 Aligned_cols=128 Identities=13% Similarity=0.174 Sum_probs=84.3
Q ss_pred ECCEEEEEEeeCCCCCC-CC------ccEEE------EeecC--CcCCceecccccCCCCC-cc------CCCeEeeeEE
Q 008189 66 YKGIYHLFYQYNPKGAV-WG------NIVWA------HSVSK--DLINWEALEPALYPSKP-FD------INGCWSGSAT 123 (574)
Q Consensus 66 ~~G~yHlfyq~~P~~~~-~g------~~~Wg------ha~S~--Dlv~W~~~~~al~P~~~-~D------~~gv~SGsav 123 (574)
.+|+|||||-..-.... .| ...+. |+.++ ++.+|+++++.+.+++. |+ ....-.+.++
T Consensus 173 ~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~~~l~~~DG~~Yqt~~q~~~~~fRDP~vf 252 (493)
T 1w18_A 173 HGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAHTPLLQPDGVLYQNGAQNEFFNFRDPFTF 252 (493)
T ss_dssp TSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEEE
T ss_pred CCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccCCceeecCccccccccccCCccccCCEEE
Confidence 58999999986533211 11 24455 44333 36799988888888753 22 2345678888
Q ss_pred EcC--CCeeEEEEeeecCCC----------------------------------cceEEEEEecCCCCcccceeeccCCC
Q 008189 124 VLP--GNKPIILYTGVDHKE----------------------------------RQVQNYAVPANPSDPYLRKWIKPDNN 167 (574)
Q Consensus 124 ~~~--dg~~~l~YTg~~~~~----------------------------------~~~q~lA~s~D~~d~~l~~w~k~~~~ 167 (574)
+++ ||+.||++.+..... ...++||++.+. .+..|+-. .
T Consensus 253 ~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~---Dl~~We~~--~ 327 (493)
T 1w18_A 253 EDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIATDS---TLSKWKFL--S 327 (493)
T ss_dssp ECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESST---TSCCEEEE--E
T ss_pred ecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEeCCC---CCccceec--C
Confidence 875 389999999875321 235666887643 25789864 5
Q ss_pred ceEecCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 168 PVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 168 Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
|++..+.. ...+.-|.|+ + .+|+|||+...+
T Consensus 328 PL~~a~~v--~deiErP~V~-~-~~GkyYLFtSs~ 358 (493)
T 1w18_A 328 PLISANCV--NDQTERPQVY-L-HNGKYYIFTISH 358 (493)
T ss_dssp EEEECTTT--BSCCEEEEEE-E-ETTEEEEEEEEC
T ss_pred ccccCCCC--CCcEECCeEE-E-ECCEEEEEEEcc
Confidence 88865432 3567789965 4 589999998866
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00027 Score=76.45 Aligned_cols=154 Identities=10% Similarity=0.052 Sum_probs=92.3
Q ss_pred eeEE-ECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCC--------CCcc---CCCeEeeeEEEcCCC
Q 008189 62 GPMY-YKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPS--------KPFD---INGCWSGSATVLPGN 128 (574)
Q Consensus 62 g~~~-~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~--------~~~D---~~gv~SGsav~~~dg 128 (574)
.+++ ++|+|||||.....+. +....|+|+|+|.. .|++++..|... ..|+ ......++++.++||
T Consensus 103 ~vi~~~dGkyylyys~~~~~~--~~~~IgvatSddp~GPw~~~g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf~DdDG 180 (470)
T 2x8s_A 103 DVTQLADGKYYMYYNACRGDS--PRSAMGVAVADNIEGPYKNKGIFLKSGMEGTSSDGTPYDATKHPNVVAPHTFFDKDG 180 (470)
T ss_dssp EEEECTTSCEEEEEEEECSSS--CCEEEEEEEESSTTCCCEEEEEEEEECCSSBCTTSSBCCTTTSCCSCCCEEEECTTS
T ss_pred eEEEecCCEEEEEEEeccCCC--CccEEEEEEeCCCCCCceeCCeeeccCcccccccccccccccCCCCCCCCEEEcCCC
Confidence 4556 4899999998765432 34679999999998 699986555321 1222 235678999988899
Q ss_pred eeEEEEeeecCCCcceEEEEEec-CCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C--
Q 008189 129 KPIILYTGVDHKERQVQNYAVPA-NPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-K-- 204 (574)
Q Consensus 129 ~~~l~YTg~~~~~~~~q~lA~s~-D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~-- 204 (574)
+.||+|.+... .+.++..+ |.+.+ ..+... ...+... ......-|+++++..+|.|||++++.. .
T Consensus 181 ~~Yl~~g~~~~----gI~~~eL~~d~~~~--~~~~~~-~~~i~~g----~~~~~EGP~i~~~K~~G~YYL~~S~g~~~~~ 249 (470)
T 2x8s_A 181 KLWMVYGSYSG----GIFILEMNPKTGFP--LPGQGY-GKKLLGG----NHSRIEGPYVLYNPDTQYYYLYLSYGGLDAT 249 (470)
T ss_dssp CEEEEECBSTT----CEEEEEBCTTTSSB--CTTCTT-CEEEECC----SSCSEEEEEEEEETTTTEEEEEEEESBSSTT
T ss_pred CEEEEeeecCC----cEEEEEECCccCcC--cCCccc-ceEecCC----CCCceeccEEEEEccCCEEEEEEEeCCCCCC
Confidence 99999986531 23444432 22110 111100 1122211 113457888654346899999988643 2
Q ss_pred CeeEEEEEEeCCCC-CCEE-cccccc
Q 008189 205 HRGMAYLYRSRDFM-KWTK-AKHPIH 228 (574)
Q Consensus 205 ~~G~i~ly~S~Dl~-~W~~-~~~~l~ 228 (574)
..-++.+++|+++. -|+. .+.++.
T Consensus 250 ~~y~v~~arS~s~~GP~~~~~g~pl~ 275 (470)
T 2x8s_A 250 GGYNIRVARSKKPDGPYYDAEGNPML 275 (470)
T ss_dssp SBCEEEEEEESSTTCCCBCTTCCBGG
T ss_pred CCceEEEEEECCCCCCCCcCCCCccc
Confidence 12268899999875 5763 344443
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00019 Score=78.66 Aligned_cols=139 Identities=14% Similarity=0.151 Sum_probs=92.0
Q ss_pred eecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCC---CcceEEEEEecCCCCcccceeeccCCC
Q 008189 91 SVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNN 167 (574)
Q Consensus 91 a~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~ 167 (574)
..|.++++|.+..--+.|...| +-.+..++-.+|+|+|||.-+... +...-+.|+|+|. +||+.. .
T Consensus 9 ~~~~~~~~~~Rp~yH~~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DL-----vhW~~~--p 77 (546)
T 3ugf_A 9 PWSNAQLSWQRTAFHFQPERSW----MSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDL-----IHWLYL--P 77 (546)
T ss_dssp CCCHHHHHHTSCSSSCCCSSEE----EEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSS-----SSCEEC--C
T ss_pred CcchhhhhhcCCeEEEeCCCCC----ccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCc-----CccccC--C
Confidence 3467889999887788886533 234443343589999999865432 3456689999984 899986 3
Q ss_pred ceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-CeeEEEEEEeCCC-----CCCEEcc-cccccCCCC---Cccc
Q 008189 168 PVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-HRGMAYLYRSRDF-----MKWTKAK-HPIHSLANT---GMWE 237 (574)
Q Consensus 168 Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~-~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~~~---~~wE 237 (574)
++|.+...++....-.+.++.. .+|+++|++.+..+ ......++.|+|+ .+|+... .|+.....+ .-+.
T Consensus 78 ~AL~P~~~~D~~G~~SGSavv~-~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fR 156 (546)
T 3ugf_A 78 LALAADQWYDMQGVFSGSATCL-PDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFR 156 (546)
T ss_dssp CCBCSCSGGGTTCEEEEEEEEC-TTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCC
T ss_pred CCCCCCcccccCCcCcceEEEe-eCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceee
Confidence 6666544444445556665433 68899999877653 2335678899885 8999864 465543222 3577
Q ss_pred ccee
Q 008189 238 CPDF 241 (574)
Q Consensus 238 cPdl 241 (574)
-|.+
T Consensus 157 DPkV 160 (546)
T 3ugf_A 157 DAST 160 (546)
T ss_dssp CBCC
T ss_pred ccce
Confidence 7874
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0031 Score=64.55 Aligned_cols=152 Identities=13% Similarity=0.109 Sum_probs=80.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCC---CccEEEEee--cCCc--CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVW---GNIVWAHSV--SKDL--INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~---g~~~Wgha~--S~Dl--v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
.++++||+|||||...+.+... +......++ +.|- -.|++.+....+.. .....++++.+ ||..+++|
T Consensus 78 ~v~~~~G~yylyys~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~~~~~~~~~----~~~IDp~vf~D-dd~~~~~~ 152 (330)
T 3k1u_A 78 EIHFINGAWYIYFAAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEKGRIKTAWE----SFSLDATIFEH-NEKLYYVW 152 (330)
T ss_dssp EEEEETTEEEEEEEEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEEEECCCSSC----SCEEEEEEEEE-TTEEEEEE
T ss_pred EEEEECCeEEEEEEeccCCCCCCcccceeeeEEEeCCCCCccccccccccccCCCC----CCccCceEEEE-CCccEEEE
Confidence 6678999999999877654322 112222222 2332 25776544322221 34678999886 55555555
Q ss_pred eeecC--CCcceEEEEEecCCCCcccceeeccCCCceE-ecC-CCCC---CcCccCCeeEEecCCCeEEEEEeeec-CCe
Q 008189 135 TGVDH--KERQVQNYAVPANPSDPYLRKWIKPDNNPVV-FPG-PDVN---ASAFRDPTTAWWSNDGHWRMLVGSRR-KHR 206 (574)
Q Consensus 135 Tg~~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi-~~~-~~~~---~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~ 206 (574)
.+... ...+.+.++..++. .+ ..+.|+. ..+ ..++ .....-|++ ++ .+|.|||++++.. +..
T Consensus 153 ~~~~~~~~~~~~i~i~~l~~~-----~~---~~g~~~~i~~~~~~~e~~~~~~~EGp~i-~k-~~G~YYL~ys~~~~~~~ 222 (330)
T 3k1u_A 153 AQQDINIKGHSNIYIAEMENP-----WT---LKTKPVMLTKPELEWEIKGFWVNEGPAV-LK-KNGKIFITYSASATDVN 222 (330)
T ss_dssp EECCTTSSSSBEEEEEEEEET-----TE---ECSCCEEEECSCSGGGCSSSCBEEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred eecCCCcCCCceEEEEECCCC-----cc---ccCCcEEecCCCccccccCCceeeCCEE-EE-ECCEEEEEEEeCCCCCC
Confidence 54432 13344555554332 11 1134433 222 1111 122367885 45 5899999988653 222
Q ss_pred eEEEEEEeCCCC------CCEEcccccc
Q 008189 207 GMAYLYRSRDFM------KWTKAKHPIH 228 (574)
Q Consensus 207 G~i~ly~S~Dl~------~W~~~~~~l~ 228 (574)
-++.+++|+... .|+..+.++.
T Consensus 223 y~~~~~~s~~~~gP~~~~~~~~~~~pi~ 250 (330)
T 3k1u_A 223 YCIGMLTAEENSNLLDKNSWTKSQTPVF 250 (330)
T ss_dssp CEEEEEEEETTSCTTSGGGCEECSSCSB
T ss_pred ceEEEEEECCCCCCCCCccccccCCCEE
Confidence 257788876543 3776555543
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00033 Score=76.04 Aligned_cols=142 Identities=11% Similarity=0.059 Sum_probs=88.9
Q ss_pred eeEEE--C--CEEEEEEeeCCCCCCCCccEEEEeecCCcCC-ceec-cc-ccCCCC-Ccc-CCCeEeeeEEEcCCCeeEE
Q 008189 62 GPMYY--K--GIYHLFYQYNPKGAVWGNIVWAHSVSKDLIN-WEAL-EP-ALYPSK-PFD-INGCWSGSATVLPGNKPII 132 (574)
Q Consensus 62 g~~~~--~--G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~-W~~~-~~-al~P~~-~~D-~~gv~SGsav~~~dg~~~l 132 (574)
.++++ + |+|||||-.. ....++|+|+|... |++. +. .+.++. ..+ ....+.+++++++||+.||
T Consensus 104 ~v~~~~~~g~g~yylyyt~~-------~~~i~va~s~~p~Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~DddG~~Yl 176 (487)
T 3c7f_A 104 SIAVKKINGKDKFFLYFANS-------GGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDDDGTGYL 176 (487)
T ss_dssp EEEEEEETTEEEEEEEEEST-------TBCEEEEEESSTTCCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEECTTSCEEE
T ss_pred heEEEecCCCCeEEEEEEcC-------CcEEEEEEeCCCCCCcccCCCCeEeecCCCCccCCCCccCCceEEcCCCCEEE
Confidence 56666 4 6999999643 14589999999985 9975 42 233221 111 1246789999888999999
Q ss_pred EEeeecCC----------CcceEEEE-EecCCCCcccceeeccCCCce-EecCCCCCCcCccCCeeEEecCCCeEEEEEe
Q 008189 133 LYTGVDHK----------ERQVQNYA-VPANPSDPYLRKWIKPDNNPV-VFPGPDVNASAFRDPTTAWWSNDGHWRMLVG 200 (574)
Q Consensus 133 ~YTg~~~~----------~~~~q~lA-~s~D~~d~~l~~w~k~~~~Pv-i~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g 200 (574)
+|.+.... ......++ .+.| +.+|.. .|+ |..+ ..+..|.+ ++ .+|+|||++.
T Consensus 177 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d-----~~~~~g---~~~~i~~p-----~~~Egp~i-~k-~~G~YYl~ys 241 (487)
T 3c7f_A 177 YAGGGVPGVSNPTQGQWANPKTARVIKLGPD-----MTSVVG---SASTIDAP-----FMFEDSGL-HK-YNGTYYYSYC 241 (487)
T ss_dssp EEECCCSSTTSCCHHHHHCCCCEEEEEECTT-----SSSEEE---EEEEECCT-----TEEEEEEE-EE-ETTEEEEEEE
T ss_pred EECCcccCccccccccccCCCceEEEEECCC-----eeeccC---ccEEecCC-----ceEecceE-EE-ECCEEEEEEE
Confidence 99863211 11234455 3444 366754 232 2221 24667884 45 6899999887
Q ss_pred eec-C------CeeEEEEEEeCCCC-CCEEccc
Q 008189 201 SRR-K------HRGMAYLYRSRDFM-KWTKAKH 225 (574)
Q Consensus 201 ~~~-~------~~G~i~ly~S~Dl~-~W~~~~~ 225 (574)
+.. . ...++.+++|+++. -|++.+.
T Consensus 242 ~~~~~t~~~~~~~~~i~~~~S~s~~GP~~~~~~ 274 (487)
T 3c7f_A 242 INFGGTHPADKPPGEIGYMTSSSPMGPFTYRGH 274 (487)
T ss_dssp ECSSSCCCTTSCTTSEEEEEESSTTCCCEEEEE
T ss_pred CCCCCCcccCCCCceeEEEEcCCCCCCceECce
Confidence 642 1 12368889999875 6988753
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00015 Score=77.44 Aligned_cols=139 Identities=15% Similarity=0.228 Sum_probs=90.0
Q ss_pred eeEE--ECCEEEEEEeeCCCCCCCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeec
Q 008189 62 GPMY--YKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVD 138 (574)
Q Consensus 62 g~~~--~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 138 (574)
.++| ++|+|||||..+..+ .+....|.|+|++.. .|+++++.+..+.. ...+.+++++++||+.||+|.+.
T Consensus 89 ~V~y~~~dGkYYLyyt~~~~~--~~~~~igVAtSdsP~GPwt~~gpl~~~g~~---~~~IDPsvF~DdDGk~YL~~g~~- 162 (441)
T 3nqh_A 89 KVMKCPSTGEYVMYMHADDMN--YKDPHIGYATCSTIAGEYKLHGPLLYEGKP---IRRWDMGTYQDTDGTGYLLLHGG- 162 (441)
T ss_dssp EEEECTTTCCEEEEEEEEETT--SCSCEEEEEEESSTTSCCEEEEECEETTEE---CCCCSEEEEECTTSCEEEEEGGG-
T ss_pred eeEEEccCCEEEEEEEeCCCC--CCcceEEEEEeCCCCCCceEcceeecCCCc---ccccCceEEEeCCCCEEEEeCCC-
Confidence 4555 499999999876432 245689999999965 89987655433321 13568899998899999999642
Q ss_pred CCCcceEEEE-EecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-CeeEEEEEEeCC
Q 008189 139 HKERQVQNYA-VPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-HRGMAYLYRSRD 216 (574)
Q Consensus 139 ~~~~~~q~lA-~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~-~~G~i~ly~S~D 216 (574)
.++ .+.| +.++.. .++...+ + .....|++ ++ .+|.|||+++.... ....+.+++|++
T Consensus 163 -------~I~eLs~D-----~~~~~g---~~~~i~~-g---~~~EgP~i-~K-~~G~YYL~~S~~~g~~~~~~~~arS~s 221 (441)
T 3nqh_A 163 -------IVYRLSKD-----YRTAEE---KVVSGVG-G---SHGESPAM-FK-KDGTYFFLFSNLTSWEKNDNFYFTAPS 221 (441)
T ss_dssp -------EEEEECTT-----SSSEEE---EEESCST-T---CCCEEEEE-EE-ETTEEEEEEECSCTTSCCCCEEEEESS
T ss_pred -------cEEEeCCc-----cccccC---ceEEeCC-C---CceECcEE-EE-ECCEEEEEEeCCCCcCCCceEEEEeCC
Confidence 133 3344 244442 1221111 1 24578994 56 69999999886421 112467899998
Q ss_pred CC-CCEEccccc
Q 008189 217 FM-KWTKAKHPI 227 (574)
Q Consensus 217 l~-~W~~~~~~l 227 (574)
+. -|+..+.++
T Consensus 222 ~~GPw~~~g~i~ 233 (441)
T 3nqh_A 222 VKGPWTRQGLFA 233 (441)
T ss_dssp TTCCCEEEEESS
T ss_pred CCCCceECCccC
Confidence 76 698876544
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0025 Score=68.05 Aligned_cols=146 Identities=11% Similarity=0.160 Sum_probs=92.6
Q ss_pred eEE-ECCEEEEEEeeCCCCCCCCccEEEEee-----cCC---cCCceecccccCCCCC-c---------------cCCCe
Q 008189 63 PMY-YKGIYHLFYQYNPKGAVWGNIVWAHSV-----SKD---LINWEALEPALYPSKP-F---------------DINGC 117 (574)
Q Consensus 63 ~~~-~~G~yHlfyq~~P~~~~~g~~~Wgha~-----S~D---lv~W~~~~~al~P~~~-~---------------D~~gv 117 (574)
.+. .+|++||||...-... .....+.+|+ |+| +..|+.+.+.+.+++. | +....
T Consensus 141 Ai~~~dG~i~LfYTg~~~~~-~~~q~I~~a~~~l~~~~dgv~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~f 219 (447)
T 1oyg_A 141 ATFTSDGKIRLFYTDFSGKH-YGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTL 219 (447)
T ss_dssp EEECTTSCEEEEEEEEEGGG-TTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCC
T ss_pred eEECcCCEEEEEEEeecCCC-CCceEEEEEecceeecCCCcceecccCCCceEcCCCccccccccccccccccCCCcccc
Confidence 344 5899999999754321 1234567776 678 4567667777877652 1 12345
Q ss_pred EeeeEEEcCCCeeEEEEeeecCCC-----------------------------------------cceEEEEE-ecCCCC
Q 008189 118 WSGSATVLPGNKPIILYTGVDHKE-----------------------------------------RQVQNYAV-PANPSD 155 (574)
Q Consensus 118 ~SGsav~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~lA~-s~D~~d 155 (574)
-.+-++.+ +|++||++.+..... ...++|+. |.|
T Consensus 220 RDP~Vf~d-~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D--- 295 (447)
T 1oyg_A 220 RDPHYVED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD--- 295 (447)
T ss_dssp EEEEEEEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT---
T ss_pred CCCeEEeE-CCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC---
Confidence 66777765 899999998875421 12455553 544
Q ss_pred cccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-C-------eeE-EEEEEeCCCC-CCE
Q 008189 156 PYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-H-------RGM-AYLYRSRDFM-KWT 221 (574)
Q Consensus 156 ~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~-~-------~G~-i~ly~S~Dl~-~W~ 221 (574)
+..|+-. .|++.+... ...+.-|.+ ++ .+|+|||++..+.. . .+. +..|.|+.|. -|+
T Consensus 296 --l~~W~~~--~pL~~~~~v--~d~~EcPdl-fk-~dGkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GPy~ 363 (447)
T 1oyg_A 296 --YTLKKVM--KPLIASNTV--TDEIERANV-FK-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363 (447)
T ss_dssp --SSEEEEE--EEEEECTTT--CSCCEEEEE-EE-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred --CCCceEc--cccccCCCC--CCceEcCcE-EE-ECCEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCCCe
Confidence 4789864 577765321 245789995 45 69999999887641 1 122 3467898885 464
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0029 Score=69.53 Aligned_cols=117 Identities=15% Similarity=0.219 Sum_probs=75.2
Q ss_pred eEeeeEEEcCCCeeEEEEeeecCC---Cc-ceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCC
Q 008189 117 CWSGSATVLPGNKPIILYTGVDHK---ER-QVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSND 192 (574)
Q Consensus 117 v~SGsav~~~dg~~~l~YTg~~~~---~~-~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~ 192 (574)
+..+..++..+|+|+|||.-+... +. ..-+.|+|+|. +||+.. .|+|.+...++....-.+.++.. .+
T Consensus 20 ~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dl-----v~W~~~--~~aL~P~~~~D~~Gv~SGsav~~-~d 91 (543)
T 1st8_A 20 MNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDL-----VNWIHL--DPAIYPTQEADSKSCWSGSATIL-PG 91 (543)
T ss_dssp EEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSS-----SSEEEC--CCSBCCCSGGGTTEEEEEEEEEE-TT
T ss_pred eECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCc-----cceEEC--CeeccCCCccccCCEEcceEEEe-eC
Confidence 344554444589999999876542 23 46788999984 899985 46776544343334445554433 58
Q ss_pred CeEEEEEeee-cCCeeEEEEEEeCCC-----CCCEEcc-cccccCCCC---Ccccccee
Q 008189 193 GHWRMLVGSR-RKHRGMAYLYRSRDF-----MKWTKAK-HPIHSLANT---GMWECPDF 241 (574)
Q Consensus 193 g~~~M~~g~~-~~~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~~~---~~wEcPdl 241 (574)
|+++|++.+. .+....+.++.|+|. .+|+... .|+.....+ ..+.-|.+
T Consensus 92 g~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~v 150 (543)
T 1st8_A 92 NIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPST 150 (543)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCC
T ss_pred CEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeE
Confidence 9999998773 333445678888875 8899863 455543222 35677874
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0058 Score=66.76 Aligned_cols=134 Identities=7% Similarity=0.008 Sum_probs=84.9
Q ss_pred eEE-ECCEEEEEEeeCCCCCC-CCccEEEEe-------ecCC---cCCceecccccCCCCCc--------------cCCC
Q 008189 63 PMY-YKGIYHLFYQYNPKGAV-WGNIVWAHS-------VSKD---LINWEALEPALYPSKPF--------------DING 116 (574)
Q Consensus 63 ~~~-~~G~yHlfyq~~P~~~~-~g~~~Wgha-------~S~D---lv~W~~~~~al~P~~~~--------------D~~g 116 (574)
.+. .+|++||||-.+-+... ......+.+ .|+| +..|+..++.+.|++.+ +...
T Consensus 200 Ai~~~DG~l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~~ 279 (571)
T 2yfr_A 200 ATLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIA 279 (571)
T ss_dssp EEECTTSCEEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCCC
T ss_pred eEECcCCEEEEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCCCceecCCCcccccccccccccccCCccc
Confidence 344 59999999997644321 123344443 2567 45677677777776522 3345
Q ss_pred eEeeeEEEcCCCeeEEEEeeecCCC-----------------------------------------cceEEEEEecCCCC
Q 008189 117 CWSGSATVLPGNKPIILYTGVDHKE-----------------------------------------RQVQNYAVPANPSD 155 (574)
Q Consensus 117 v~SGsav~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~lA~s~D~~d 155 (574)
.-.+.++.+.+|++||++.+..... ...++|+.|.|..
T Consensus 280 FRDP~Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~- 358 (571)
T 2yfr_A 280 MRDAHVIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDV- 358 (571)
T ss_dssp CEEEEEEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCT-
T ss_pred CcCCeEEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCc-
Confidence 5678887754599999998875321 2456788886632
Q ss_pred cccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 008189 156 PYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR 203 (574)
Q Consensus 156 ~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~ 203 (574)
..+..|+-. .|++.+... ...+.-|.+ ++ .+|+|||++..+.
T Consensus 359 ~n~~~We~~--~pL~~~~~v--~dm~EcP~l-f~-~dG~yyL~~S~q~ 400 (571)
T 2yfr_A 359 KNPSVAKVY--SPLISAPMV--SDEIERPDV-VK-LGNKYYLFAATRL 400 (571)
T ss_dssp TSCCEEEEC--CCSEECTTT--BSCCEEEEE-EE-ETTEEEEEEEEEG
T ss_pred CCcccceec--cccccCCCc--CceeecCcE-EE-ECCEEEEEEeCCC
Confidence 124689853 678754321 246788985 45 5899999987763
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0058 Score=67.14 Aligned_cols=117 Identities=12% Similarity=0.216 Sum_probs=74.9
Q ss_pred eEeeeEEEcCCCeeEEEEeeecCC---CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC
Q 008189 117 CWSGSATVLPGNKPIILYTGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG 193 (574)
Q Consensus 117 v~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g 193 (574)
+..+..++..+|+++|||.-+... +...-+.|+|+|. +||+.. .|+|.+...++....-.+.++.. .+|
T Consensus 21 ~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~--~~aL~P~~~~D~~G~~SGsav~~-~dg 92 (541)
T 2ac1_A 21 MNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL-----INWDPH--PPAIFPSAPFDINGCWSGSATIL-PNG 92 (541)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSS-----SSBEEE--EEEECCCSGGGTTCEEEEEEEEC-TTS
T ss_pred eeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCc-----cceEEC--ceeecCCCccccCCEEcceEEEe-eCC
Confidence 344554443589999999876432 3345678999984 899985 46776544344344455665433 588
Q ss_pred eEEEEEeee-cCCeeEEEEEEeCCC-----CCCEEcc-cccccCC--C---CCcccccee
Q 008189 194 HWRMLVGSR-RKHRGMAYLYRSRDF-----MKWTKAK-HPIHSLA--N---TGMWECPDF 241 (574)
Q Consensus 194 ~~~M~~g~~-~~~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~--~---~~~wEcPdl 241 (574)
+++|++.+. .+....+.++.|+|. .+|+... .|+.... . ...+.-|.+
T Consensus 93 ~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~v 152 (541)
T 2ac1_A 93 KPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTT 152 (541)
T ss_dssp CEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCC
T ss_pred EEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeE
Confidence 999998774 233446678889874 8999863 4555432 2 234667773
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.011 Score=64.47 Aligned_cols=119 Identities=8% Similarity=0.004 Sum_probs=74.8
Q ss_pred eeeEEEcCCCeeEEEEeeecCC---CcceEEEEEecCCCCcccceeeccCCCceEec--CCCCCCcCccCCeeEEecCCC
Q 008189 119 SGSATVLPGNKPIILYTGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP--GPDVNASAFRDPTTAWWSNDG 193 (574)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~--~~~~~~~~fRDP~Vvw~~~~g 193 (574)
.++.++-.+|+++|||.-+... +...-+.|+|+|. +||+.. .++|.+ .+..+....-.+.++-. .+|
T Consensus 22 DPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dl-----v~W~~~--~~al~~~g~P~~d~~g~~SGsav~~-~~~ 93 (518)
T 1y4w_A 22 DPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDL-----THWEEK--PVALLARGFGSDVTEMYFSGSAVAD-VNN 93 (518)
T ss_dssp EEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSS-----SSCEEE--EEEECCBTTTSCCCBEEEEEEEEEC-TTC
T ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC-----ccEEEC--CceEecCCCCCCCCCceEeeeEEEc-CCC
Confidence 4453333589999999865332 3456789999984 999986 355511 11123345556665533 343
Q ss_pred ----------eEEEEEeeecC-C------------eeEEEEEEeCC-CCCCEEc--ccccccCCC------CCcccccee
Q 008189 194 ----------HWRMLVGSRRK-H------------RGMAYLYRSRD-FMKWTKA--KHPIHSLAN------TGMWECPDF 241 (574)
Q Consensus 194 ----------~~~M~~g~~~~-~------------~G~i~ly~S~D-l~~W~~~--~~~l~~~~~------~~~wEcPdl 241 (574)
+++|++.+... . .-.+.++.|+| +.+|+.. +.|+..... ..-+.-|.+
T Consensus 94 ~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g~~w~k~~~~~pvi~~~~~~y~~~~~~fRDP~V 173 (518)
T 1y4w_A 94 TSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFV 173 (518)
T ss_dssp TTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTTSSCEECTTTCCSBCSCCTTCGGGTTSEEEEEE
T ss_pred ccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCCceEEEcCCCCCeEecCCcccccCCCCcCCCcE
Confidence 78888765431 1 23567888988 8899986 245554322 245788999
Q ss_pred EEec
Q 008189 242 YPVS 245 (574)
Q Consensus 242 f~l~ 245 (574)
|..+
T Consensus 174 ~~~~ 177 (518)
T 1y4w_A 174 FWHD 177 (518)
T ss_dssp EEET
T ss_pred eEEC
Confidence 9875
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.02 Score=62.12 Aligned_cols=125 Identities=14% Similarity=0.106 Sum_probs=78.6
Q ss_pred eeeEEEcCCCeeEEEEeeecCC--CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC---
Q 008189 119 SGSATVLPGNKPIILYTGVDHK--ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG--- 193 (574)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~--~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g--- 193 (574)
.++.++-.+|+|+|||.-+... ... -+.|+|+|. +||+.. .+.|.+.. ....-...++-. .++
T Consensus 15 DPNG~~y~~G~YHlFYQ~~P~~~~~g~-WgHa~S~DL-----vhW~~~--~~aL~P~~---~~g~~SGSav~~-~~~~~g 82 (492)
T 4ffh_A 15 NPQRPVTTHGAYQLYYLHSDQNNGPGG-WDHASTTDG-----VAFTHH--GTVMPLRP---DFPVWSGSAVVD-TANTAG 82 (492)
T ss_dssp EEEEEEEETTEEEEEEEEESSTTCCCE-EEEEEESSS-----SSCEEE--EEEECCBT---TBCCCCEEEEEE-TTCSSS
T ss_pred CCeeeEEECCEEEEEEECCCCCCCCCc-EEEEEeCCC-----CccEEC--CCCCCCCC---CCCEEeceEEEe-CCCccc
Confidence 3444443589999999865332 122 689999984 899986 35564432 234455554444 444
Q ss_pred ----eEEEEEeeecC---CeeEEEEEEeCC-CCCCEEcccccccCCCCCc------------cccceeEEeccCCCCccc
Q 008189 194 ----HWRMLVGSRRK---HRGMAYLYRSRD-FMKWTKAKHPIHSLANTGM------------WECPDFYPVSISGKNGLD 253 (574)
Q Consensus 194 ----~~~M~~g~~~~---~~G~i~ly~S~D-l~~W~~~~~~l~~~~~~~~------------wEcPdlf~l~~~g~~~~~ 253 (574)
.++|++.+... ..-.+.++.|+| +.+|+..+.|+.......- +.-|.+|+.+..|
T Consensus 83 ~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g~~w~k~~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V~~~~~~g----- 157 (492)
T 4ffh_A 83 FGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDTARG----- 157 (492)
T ss_dssp SCTTEEEEEEEEEGGGCGGGEEEEEEEESSSSSSCEECSSCSBCCTTTTTCCSHHHHHHHTCEEEEEEEEETTTT-----
T ss_pred cCCCcEEEEEeecccCCCCcEEEEEEEeCCCCceEEEcCccccCCCCccccccccccccCCCCcCCEEEEECCCC-----
Confidence 48888766432 233567889998 6899988656654322222 7789999864223
Q ss_pred cccCCCCceEEEEEe
Q 008189 254 TSFAGGNEKFVLKVS 268 (574)
Q Consensus 254 ~~~~~~~~k~vl~~s 268 (574)
+|+|+++
T Consensus 158 --------~w~mv~a 164 (492)
T 4ffh_A 158 --------EWVCVIG 164 (492)
T ss_dssp --------EEEEEEE
T ss_pred --------EEEEEEE
Confidence 7888774
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0043 Score=67.86 Aligned_cols=125 Identities=7% Similarity=-0.014 Sum_probs=79.5
Q ss_pred CCEEEEEEeeCCCCC--C-CC--ccEEEEeecCCc--CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 67 KGIYHLFYQYNPKGA--V-WG--NIVWAHSVSKDL--INWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 67 ~G~yHlfyq~~P~~~--~-~g--~~~Wgha~S~Dl--v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
+|+++|||--+.... . .+ ....++|+|+|+ ++|+..+++|..-........-.+.+.. .+|+++|++.+...
T Consensus 122 dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~gl~~w~K~~pvi~~P~~~~~~~fRDP~V~~-~~g~w~mv~ga~~~ 200 (526)
T 3pij_A 122 NGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSATKQGMIIDCPTDKVDHHYRDPKVWK-TGDTWYMTFGVSSA 200 (526)
T ss_dssp TSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTTCSCEEEEEEEECCCGGGEEEEEEEEEEEE-ETTEEEEEEEEEET
T ss_pred CCEEEEEEecccCcccccCCCCceeEEEEEEECCCCcceEEECCccccCCCCccccccccCEEEE-ECCEEEEEEEEecC
Confidence 689999998663211 1 12 256899999997 8999887655321111112345677766 58999999875443
Q ss_pred CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCC-----eEEEEEeee
Q 008189 140 KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDG-----HWRMLVGSR 202 (574)
Q Consensus 140 ~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g-----~~~M~~g~~ 202 (574)
+......+..|+| |++|+.. ++++..+.. ....|.-|-++ . -++ +|+|+++.+
T Consensus 201 ~~~G~i~ly~S~D-----l~~W~~~--g~l~~~~~~-~g~mwECPdlf-~-l~~~~g~~k~vL~~s~~ 258 (526)
T 3pij_A 201 DKRGQMWLFSSKD-----MVRWEYE--RVLFQHPDP-DVFMLECPDFS-P-IKDKDGNEKWVIGFSAM 258 (526)
T ss_dssp TSCEEEEEEEESS-----SSSCEEE--EEEEECSCT-TCCEEEEEEEE-E-EECTTSCEEEEEEEEEE
T ss_pred CCCcEEEEEECCC-----CCcceEc--CcccccCCC-ccCeEECCEEE-E-ECCCCCceeEEEEEecc
Confidence 3344667888887 4899985 565543321 22467788743 3 334 899987754
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.015 Score=63.85 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=54.7
Q ss_pred CCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCC--------------
Q 008189 166 NNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLA-------------- 231 (574)
Q Consensus 166 ~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~-------------- 231 (574)
.||||. ..+.||.|+.. ++.|||+.... +...-+.+|+|+||.+|+..+..+...+
T Consensus 9 ~NPil~-------g~~~DP~iir~--~~~YY~~~st~-~~~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~ 78 (542)
T 3zxk_A 9 TNPVLW-------EDHPALEVFRV--GSVFYYSSSTF-AYSPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGA 78 (542)
T ss_dssp ESCSCC-------SCCCSCEEEEE--TTEEEEECCCB-TEESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTT
T ss_pred cCCccC-------CCCCCCeEEEE--CCEEEEEEecC-ccCCCeEEEEcCCCCCccccccccccCCccccccccCCcccc
Confidence 388884 35689997643 77999885542 2223478999999999999886442110
Q ss_pred CCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 232 NTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 232 ~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
.....-.|++...+..| +|+|.++.+
T Consensus 79 ~~~~~WAP~i~~~~~~G-------------~fYly~~~~ 104 (542)
T 3zxk_A 79 YVKGIWASTLRYRRSND-------------RFYWYGCVE 104 (542)
T ss_dssp TTCSBCSCEEEEETTTT-------------EEEEEEEET
T ss_pred cCCceECCcEEEECCCC-------------EEEEEEECC
Confidence 12234578888875223 888887764
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.16 Score=52.56 Aligned_cols=169 Identities=11% Similarity=0.082 Sum_probs=92.5
Q ss_pred ECCEEEEEEeeCCCCCCCCccEEEEeecCCc-CCceecccccCCCCCccCCCeEeeeEEEcC-------CCeeEEEEeee
Q 008189 66 YKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL-INWEALEPALYPSKPFDINGCWSGSATVLP-------GNKPIILYTGV 137 (574)
Q Consensus 66 ~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~-------dg~~~l~YTg~ 137 (574)
.||+.-++|...... .+..+++..+|+|. .+|++......+...+ .-|+.++++... +|++.+.+...
T Consensus 32 ~dG~lLa~~~~~~~~--~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~~P~l~~lp~~v~~~~~G~ll~~~~~~ 107 (355)
T 3a72_A 32 PNGDLLATWENYSPE--PPAVYFPIYRSKDHGKTWNEISRVHDTVNGY--GLRYQPFLYSLPERVGSFKKGTLLLAGSSI 107 (355)
T ss_dssp TTSCEEEEEEECCCS--SSCCCEEEEEESSTTSCCEEEEEECCTTTSS--CEEEEEEEEECSSCBTTBCTTCEEEEEEEC
T ss_pred CCCCEEEEEEeecCC--CCCceEEEEEEcCCCcCcCCCcccCCCcCCc--ccccCCcEEecCcccccCCCCcEEEEEeee
Confidence 488888877655332 24456778889996 8999875433222211 113466666544 77776665443
Q ss_pred cCC-CcceEEEEEecCCCCcccceeeccCCCceEecC-CCC--CCcCccCCeeEEecCCCeEEEEEeeec-C-Cee-EEE
Q 008189 138 DHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPG-PDV--NASAFRDPTTAWWSNDGHWRMLVGSRR-K-HRG-MAY 210 (574)
Q Consensus 138 ~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~-~~~--~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~-~~G-~i~ 210 (574)
... ....+.+..|+|+| ++|++.. .+-... +.. .....-.|++. . .+|..++++..+. + ..+ .+.
T Consensus 108 ~~d~~~~~~~v~~S~D~G----~TW~~~~--~i~~~~~~~~~~g~~~v~eP~~~-~-~~G~l~~~~~~~~~~~~~~~~~~ 179 (355)
T 3a72_A 108 PTDLSSTDIVLYASQDDG----MTWDFVS--HIAAGGEARPNNGLTPVWEPFLL-A-NKGKLICYYSDQRDNATYGQTMV 179 (355)
T ss_dssp CTTCCCEEEEEEEESSTT----SCCEEEE--EEEEESCSSCCTTCCCEEEEEEE-E-ETTEEEEEEEECCCTTTCSCEEE
T ss_pred cCCCCCceEEEEEECCCC----ccCccCc--cccccCccccccCCCccccceEE-c-cCCeEEEEECCCCCCCCCCcEEE
Confidence 211 23456788999986 8999852 232211 100 00112245432 2 4788887776543 1 123 466
Q ss_pred EEEeCCCCCCEEcccccccCCCCCccccceeEEecc
Q 008189 211 LYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSI 246 (574)
Q Consensus 211 ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~ 246 (574)
+..|+|+++|...............--.|.+.+|.+
T Consensus 180 ~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~d 215 (355)
T 3a72_A 180 HQVTNDLKNWGPVVEDVTYPTYTDRPGMPVVTKLPN 215 (355)
T ss_dssp EEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECTT
T ss_pred EEECCCCCCCCCCeeccccCccCCCCCceEEEECCC
Confidence 778999999965322111111111112478888874
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.21 Score=51.97 Aligned_cols=169 Identities=11% Similarity=0.100 Sum_probs=93.1
Q ss_pred ECCEEEEEEeeCCCCCCCCccEEEEeecCCc-CCceecccccCCCCCccCCCeEeeeEEEcC-------CCeeEEEEeee
Q 008189 66 YKGIYHLFYQYNPKGAVWGNIVWAHSVSKDL-INWEALEPALYPSKPFDINGCWSGSATVLP-------GNKPIILYTGV 137 (574)
Q Consensus 66 ~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~-------dg~~~l~YTg~ 137 (574)
.||+.-++|...... .+..++...+|+|. .+|++......+...+ .-|+.+++++.. +|++.+.+...
T Consensus 37 ~dG~LLa~~~~~~~~--~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~~P~l~~lP~~i~~~~~G~lL~~~~s~ 112 (367)
T 2ydt_A 37 SDGTLLGTWENYSPE--PPNVWFPIVKSKDGGKTWKEISKVKDTQNNW--GLRYQPQLYELPRAFGKYPKGTVLCSGSSI 112 (367)
T ss_dssp TTSCEEEEEEECCCS--SSCCCEEEEEESSTTSSCEEEEEECCCSSSS--CEEEEEEEEECSSCBTTBCTTCEEEEEEEC
T ss_pred CCCCEEEEEEeccCC--CCCeEEEEEEECCCCcCcCcCcccCCCCCCc--ccccCCeEEEccccccccCCCcEEEEEecc
Confidence 488888877554322 24567788899996 8999865433332222 224566666543 67776665543
Q ss_pred cCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCC---CCcCccCCeeEEecCCCeEEEEEeeecC--Cee-EEE
Q 008189 138 DHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDV---NASAFRDPTTAWWSNDGHWRMLVGSRRK--HRG-MAY 210 (574)
Q Consensus 138 ~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~---~~~~fRDP~Vvw~~~~g~~~M~~g~~~~--~~G-~i~ 210 (574)
..+ ....+.+..|+|+| ++|++. ..|....... .....-+|+++ . .+|..++++....+ ..+ .+.
T Consensus 113 ~~d~~~~~i~v~~S~D~G----~TW~~~--~~i~~g~~~~~~~g~~~v~eP~~~-~-~~G~l~v~~~d~~~~~~~~q~l~ 184 (367)
T 2ydt_A 113 PSDLSETLIEVYASRDKG----YTWEFV--SHVALGGEALPNPGLTPVWEPFLM-T-YKEKLILYYSDQRDNATHSQKLV 184 (367)
T ss_dssp CTTCCCEEEEEEEESSSS----SCCEEE--EEEEEESCSSCCTTCCCEEEEEEE-E-ETTEEEEEEEECCSTTTCSSEEE
T ss_pred cCCCCCCeEEEEEECCCC----CCCcCC--eecccCCCcccccCCCccccceEE-C-CCCcEEEEECCCCCCCCCCcEEE
Confidence 221 23456788999986 899985 2333211100 00112245533 3 47777776655432 234 466
Q ss_pred EEEeCCCCCCEEcccccccCCCCCccccceeEEecc
Q 008189 211 LYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSI 246 (574)
Q Consensus 211 ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~ 246 (574)
+..|+|+++|...............--.|.+.++.+
T Consensus 185 ~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~d 220 (367)
T 2ydt_A 185 HQTTTDLKKWSKVVDDTKYANYYARPGMPTVAKLPN 220 (367)
T ss_dssp EEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECTT
T ss_pred EEECCCCCCCCCceeccccCCcCCCCCcceEEECCC
Confidence 778999999965321110011111122477888873
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.058 Score=58.59 Aligned_cols=120 Identities=11% Similarity=0.075 Sum_probs=74.1
Q ss_pred CCeeEEEEeeecCC---C-cceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec------------
Q 008189 127 GNKPIILYTGVDHK---E-RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS------------ 190 (574)
Q Consensus 127 dg~~~l~YTg~~~~---~-~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~------------ 190 (574)
+|+|+|||.-+... + ...-+.|+|+| |+||+.. .+.|.+.. +....-...++-.+
T Consensus 34 ~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~D-----LvhW~~~--~~aL~P~~--d~~G~~SGSav~d~~~t~g~~~~~~~ 104 (509)
T 3kf3_A 34 AKLWHLYFQYNPNATAWGQPLYWGHATSND-----LVHWDEH--EIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSID 104 (509)
T ss_dssp TTEEEEEEEEETTCSSCCSSBEEEEEEESS-----SSSCEEC--SCCBCCSS--TTCEEEEEEEEECTTCTTSCCCTTSC
T ss_pred CCEEEEEEecCCCCCCCCCcCEEEEEEccC-----CCCcEEC--cccccccc--cCCCEEeceEEEeCCccccccccccC
Confidence 69999999755322 2 24568999998 4999986 35664432 22223333333221
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcc-cccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEe
Q 008189 191 NDGHWRMLVGSRRKHRGMAYLYRSRD-FMKWTKAK-HPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVS 268 (574)
Q Consensus 191 ~~g~~~M~~g~~~~~~G~i~ly~S~D-l~~W~~~~-~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s 268 (574)
.+++++|++.+.....-...++.|.| +.+|+... .|+... ...-+.-|.+|..+..| +|+|++.
T Consensus 105 p~~~l~~~YTg~~~~~q~q~lA~S~D~g~~~~k~~~nPVi~~-~~~~fRDPkVfw~~~~g-------------~w~Mv~g 170 (509)
T 3kf3_A 105 PNQRIVAIYTNNIPDNQTQDIAFSLDGGYTFTKYENNPVIDV-SSNQFRDPKVFWHEDSN-------------QWIMVVS 170 (509)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEESSSSSSCEECTTCCSBCC-SCSSCEEEEEEEETTTT-------------EEEEEEE
T ss_pred CCCceEEEECCCCCCCeeEEEEEECCCCcceEEcCCCceEcC-CCCcccCCeEEEECCCC-------------EEEEEEE
Confidence 13578888766443344567888988 68999864 355432 23457789998765322 7887765
Q ss_pred e
Q 008189 269 L 269 (574)
Q Consensus 269 ~ 269 (574)
.
T Consensus 171 ~ 171 (509)
T 3kf3_A 171 K 171 (509)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.13 Score=53.39 Aligned_cols=143 Identities=17% Similarity=0.282 Sum_probs=82.1
Q ss_pred EECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC----C
Q 008189 65 YYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH----K 140 (574)
Q Consensus 65 ~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~----~ 140 (574)
..+|+..++|.....++.+ ...+.|++|+|+.+|...-....+. .+. .-.-...++...||+++|.|.-... .
T Consensus 156 ~~~G~l~~~~~~~~~~~~~-~~~~~~~~S~DG~TWs~~~~~~~~~-~~~-~rpg~p~v~~l~dG~l~l~y~~~~~~~~~~ 232 (355)
T 3a72_A 156 ANKGKLICYYSDQRDNATY-GQTMVHQVTNDLKNWGPVVEDVTYP-TYT-DRPGMPVVTKLPNGQYFYVYEYGSFFGTET 232 (355)
T ss_dssp EETTEEEEEEEECCCTTTC-SCEEEEEEESSSSSCCCCEEEECCS-STT-CEEEEEEEEECTTSCEEEEEEEEBCTTSSS
T ss_pred ccCCeEEEEECCCCCCCCC-CcEEEEEECCCCCCCCCCeeccccC-ccC-CCCCceEEEECCCCCEEEEEEECCCcccCC
Confidence 3699999999765423222 3568999999999997543222221 111 1111245566789999998876532 1
Q ss_pred CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec---CCCeEEEEEeeecCCeeEEEEEEeCC-
Q 008189 141 ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS---NDGHWRMLVGSRRKHRGMAYLYRSRD- 216 (574)
Q Consensus 141 ~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~---~~g~~~M~~g~~~~~~G~i~ly~S~D- 216 (574)
+......++|.|+ .+|....+.++..+. +. ...--|+|.|.. .+|.-+ +.++. .. .+|.|.|
T Consensus 233 ~~~~~~~~iS~DG-----~tw~~~~~~~~~~~~-~~--~~~g~p~v~~~~~gg~~g~ll-~s~~~---~~--~v~~s~~~ 298 (355)
T 3a72_A 233 YSFPLYYRLSSDP-----ENIASAPGQRLVVSS-GT--QPTSSPYAVWTPYGGENGTII-VSSGT---QG--TLFINKAL 298 (355)
T ss_dssp CBCBEEEEEESST-----TCCTTSCCEECCBTT-CC--CCBSSCEEEEESTTSTTCEEE-EECSS---CS--SEEEESST
T ss_pred CceeEEEEECCCc-----ccccCcCCcceecCC-Cc--ccCCCCeEEECcCCCCCCeEE-EEcCC---Cc--EEEEECCC
Confidence 2345677889874 789765322333322 21 245678888863 234333 33321 12 2566655
Q ss_pred C-CCCEEcc
Q 008189 217 F-MKWTKAK 224 (574)
Q Consensus 217 l-~~W~~~~ 224 (574)
. ..|+...
T Consensus 299 g~~~W~~~~ 307 (355)
T 3a72_A 299 GEGEWTEIP 307 (355)
T ss_dssp TCSCBEEEC
T ss_pred CCCCCeECC
Confidence 5 7898764
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.081 Score=57.10 Aligned_cols=130 Identities=15% Similarity=0.123 Sum_probs=80.4
Q ss_pred EECCEEEEEEeeCCC-----CCCCC--ccEEEEee-----cCCcCCce---ecccccCCCCCccC-------CCeEeeeE
Q 008189 65 YYKGIYHLFYQYNPK-----GAVWG--NIVWAHSV-----SKDLINWE---ALEPALYPSKPFDI-------NGCWSGSA 122 (574)
Q Consensus 65 ~~~G~yHlfyq~~P~-----~~~~g--~~~Wgha~-----S~Dlv~W~---~~~~al~P~~~~D~-------~gv~SGsa 122 (574)
..||+++|||...-+ +.... ....++|+ |.|.++|+ .+++.+.||..+.+ ...-.+.+
T Consensus 170 ~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fRDP~v 249 (496)
T 3vss_A 170 SKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFT 249 (496)
T ss_dssp CTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEE
T ss_pred CCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccCCCee
Confidence 358999999985421 11111 24566654 67777665 45667788764321 22346777
Q ss_pred EEc--CCCeeEEEEeeecCC----------------------------------CcceEEEEEecCCCCcccceeeccCC
Q 008189 123 TVL--PGNKPIILYTGVDHK----------------------------------ERQVQNYAVPANPSDPYLRKWIKPDN 166 (574)
Q Consensus 123 v~~--~dg~~~l~YTg~~~~----------------------------------~~~~q~lA~s~D~~d~~l~~w~k~~~ 166 (574)
+++ .+|..||++.|+... ....++||..++. ++..|+-.
T Consensus 250 f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~---D~~~We~~-- 324 (496)
T 3vss_A 250 FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNK---QLTEWEFL-- 324 (496)
T ss_dssp ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESST---TSCCEEEE--
T ss_pred EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCC---CCCccEEe--
Confidence 665 368899999886431 0124556766442 25789875
Q ss_pred CceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 008189 167 NPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR 203 (574)
Q Consensus 167 ~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~ 203 (574)
.||+.+... ...+.-|.|| + .+|+||++..++.
T Consensus 325 ~PL~~a~~v--~deiErP~vf-~-~dGKyYLFt~s~~ 357 (496)
T 3vss_A 325 PPILSANCV--TDQTERPQIY-F-KDGKSYLFTISHR 357 (496)
T ss_dssp EEEEEEETT--BSCCEEEEEE-E-ETTEEEEEEEECS
T ss_pred CccccCCCC--CCceeCCcEE-E-ECCEEEEEEeccc
Confidence 588864332 2467889965 4 5999999987654
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.18 Score=52.48 Aligned_cols=144 Identities=16% Similarity=0.267 Sum_probs=81.0
Q ss_pred EECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC-----
Q 008189 65 YYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH----- 139 (574)
Q Consensus 65 ~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~----- 139 (574)
..+|+..++|......+. ....+.|++|+|+.+|...-... +...+... .--..++...||+++|.|.-...
T Consensus 161 ~~~G~l~v~~~d~~~~~~-~~q~l~~~~S~DG~TWs~~~~~~-~~~~~~~r-pg~p~v~~l~dG~l~~~y~~~~~~~~~~ 237 (367)
T 2ydt_A 161 TYKEKLILYYSDQRDNAT-HSQKLVHQTTTDLKKWSKVVDDT-KYANYYAR-PGMPTVAKLPNNEYIYVYEYGGGPNPPA 237 (367)
T ss_dssp EETTEEEEEEEECCSTTT-CSSEEEEEEESSSSSCCCCEEEE-CCSSTTCE-EEEEEEEECTTSCEEEEEEEETCSCCCT
T ss_pred CCCCcEEEEECCCCCCCC-CCcEEEEEECCCCCCCCCceecc-ccCCcCCC-CCcceEEECCCCcEEEEEEecCCCCccc
Confidence 468999999976542122 23468899999999997542211 21111110 11134556678999998875431
Q ss_pred --CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec---CCCeEEEEEeeecCCeeEEEEEEe
Q 008189 140 --KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS---NDGHWRMLVGSRRKHRGMAYLYRS 214 (574)
Q Consensus 140 --~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~---~~g~~~M~~g~~~~~~G~i~ly~S 214 (574)
.......+++|.|+ .+|....+.++.. +.+. ..-.-|+++|.. .+|..++. +. .. . .+|.|
T Consensus 238 ~~~~~~~~~~~~S~DG-----~tw~~~~~~~l~~-~~~~--~~~~sp~v~~~p~~~~~g~l~~s-~~-~~--~--~v~~~ 303 (367)
T 2ydt_A 238 GSDYWFPVYYRLSKDP-----QKFLNKAHHQIVS-NDGT--TPAGSPYVVWTPYGGKNGTIVVS-CG-TR--S--EIFTN 303 (367)
T ss_dssp TCSCCCBEEEEEESST-----TCCTTSCCEECCC-TTCC--CCBSSCEEEEESTTSTTCEEEEE-CS-SC--S--CEEEE
T ss_pred ccccccceEEEEcCCc-----cccCCcCCceeec-CCCc--ccCcCceEEECcCCCCCCeEEEE-cC-CC--c--eEEEE
Confidence 11234667888885 7897653223332 2221 234678988873 24544333 22 11 1 36777
Q ss_pred CCC-C--CCEEccc
Q 008189 215 RDF-M--KWTKAKH 225 (574)
Q Consensus 215 ~Dl-~--~W~~~~~ 225 (574)
.|+ . .|+....
T Consensus 304 ~~~g~~~~W~~~~~ 317 (367)
T 2ydt_A 304 QALGDASAWKKWDV 317 (367)
T ss_dssp SSTTCTTCCEEECC
T ss_pred CCCCCCCcceeccC
Confidence 664 4 7988653
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.15 Score=55.72 Aligned_cols=149 Identities=10% Similarity=0.093 Sum_probs=86.2
Q ss_pred CCcee-eeEEE--CCEEEEEEeeCCC-C--CCC----------CccEEEEeecCC-cCCceecccccCCCCCc-cCCCeE
Q 008189 57 KHWIN-GPMYY--KGIYHLFYQYNPK-G--AVW----------GNIVWAHSVSKD-LINWEALEPALYPSKPF-DINGCW 118 (574)
Q Consensus 57 ~gw~N-g~~~~--~G~yHlfyq~~P~-~--~~~----------g~~~Wgha~S~D-lv~W~~~~~al~P~~~~-D~~gv~ 118 (574)
.+.+| .+++. +|+-+|||-+... + ..| ........+|+| +.+|.+. ..|.+.... +...++
T Consensus 246 ~~~~nP~lvvD~~tG~I~L~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~~~~ 324 (523)
T 4fj6_A 246 NGVGDPSILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDGKTWSEP-INITSQVKDPSWYFLL 324 (523)
T ss_dssp SCEEEEEEEECTTTCCEEEEEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTTSSCCCC-EECHHHHCCTTCSEEE
T ss_pred ccccCceEEEECCCCeEEEEEEecccccccccccccccCCCCCcceEEEEEEcCCCCccCCCC-eeecccccCCcceEEe
Confidence 45777 77774 6999999887532 1 011 012455677776 5999873 223221100 011222
Q ss_pred --eeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEE
Q 008189 119 --SGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWR 196 (574)
Q Consensus 119 --SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~ 196 (574)
.|+.++..+|++++--.+....+.....+.+|+|.| .+|+... ++- ....+|.|+-. ++|..+
T Consensus 325 ~g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G----~TW~~~~--~~~--------~~~~e~~vve~-~dG~L~ 389 (523)
T 4fj6_A 325 QGPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRG----KTWHLHN--LAR--------TNTTEAQVAEV-EPGVLM 389 (523)
T ss_dssp ECSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CSE--------ETEEEEEEEEE-ETTEEE
T ss_pred cCCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCC----CeEEECC--CCC--------ccccCCEEEEe-cCCEEE
Confidence 355566778987642212222234456678898876 8999752 221 12578886522 478888
Q ss_pred EEEeeecCCeeEEEEEEeCC-CCCCEEc
Q 008189 197 MLVGSRRKHRGMAYLYRSRD-FMKWTKA 223 (574)
Q Consensus 197 M~~g~~~~~~G~i~ly~S~D-l~~W~~~ 223 (574)
|.+....+ |...+|+|.| +..|+..
T Consensus 390 ~~~R~~~~--g~r~v~~S~D~G~TWt~~ 415 (523)
T 4fj6_A 390 LNMRDNRG--GSRAVATTKDLGKTWTEH 415 (523)
T ss_dssp EEEEETTC--SBCEEEEESSTTSSCEEC
T ss_pred EEEEecCC--CcEEEEEECCCCCccCcC
Confidence 87655432 4456788876 6899874
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.06 Score=59.93 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=65.3
Q ss_pred CCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCC--CceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 008189 126 PGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDN--NPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR 203 (574)
Q Consensus 126 ~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~--~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~ 203 (574)
.+|.|+|||--+. .+ -+.|+|+| |+||+..+. .+.|.+...++....-.-.++-...+|+++|++.+..
T Consensus 50 ~~G~YHlFYQ~~P-~g---WgHa~S~D-----LvhW~~~~~~~~~aL~P~~~~D~~G~~SGSav~~~~~g~~~~~YTg~~ 120 (634)
T 3lig_A 50 STGLFHVGFLHDG-DG---IAGATTAN-----LATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVS 120 (634)
T ss_dssp TTCCEEEEEEETT-SC---EEEEEESS-----SSCCEESCSTTCEEECSCSSSCSSEEEEEEEESSCGGGSCEEEEEEEC
T ss_pred CCCEEEEEEecCC-Cc---eeEEEecC-----cCceeECcCCCCceecCCCCCCCCCcEeeEEEEECCCCEEEEEEEecc
Confidence 5899999998543 22 68999998 499998632 4566554433322222233332213677887776542
Q ss_pred -----------CCeeEEEEEEeCC-CCCCEEcc-cccccC-CCC---CccccceeEE
Q 008189 204 -----------KHRGMAYLYRSRD-FMKWTKAK-HPIHSL-ANT---GMWECPDFYP 243 (574)
Q Consensus 204 -----------~~~G~i~ly~S~D-l~~W~~~~-~~l~~~-~~~---~~wEcPdlf~ 243 (574)
++.-...++.|+| +.+|++.. .|++.. ..+ .-|-=|.+|+
T Consensus 121 ~~~~~~~~~~~~~~q~Q~lA~S~D~g~~w~K~~~nPVi~~~p~g~~~~~fRDPkV~~ 177 (634)
T 3lig_A 121 FLPIHWSIPYTRGSETQSLAVARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFR 177 (634)
T ss_dssp SCCCCTTSCCCTTSEEEEEEEEEGGGTEEEECSSSCSBCSSSTTCCEEEEEEEEEEC
T ss_pred cccccccCcCCCCcEEEEEEEECCCCCEEEECCCCceEcCCCcccCCCccCCCeEcc
Confidence 1122456778876 78999874 455542 222 1366688887
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=93.70 E-value=1.4 Score=48.44 Aligned_cols=169 Identities=16% Similarity=0.081 Sum_probs=93.1
Q ss_pred eeEEE-CCEEEEEEeeCCCCC-CCCccEEEEeecCCc-CCceecccccCCCC-CccCCCeEeeeEEEc-CCCeeEEEEee
Q 008189 62 GPMYY-KGIYHLFYQYNPKGA-VWGNIVWAHSVSKDL-INWEALEPALYPSK-PFDINGCWSGSATVL-PGNKPIILYTG 136 (574)
Q Consensus 62 g~~~~-~G~yHlfyq~~P~~~-~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~-~~D~~gv~SGsav~~-~dg~~~l~YTg 136 (574)
.++.. +|....||...+... .++........|+|. .+|+.... |..+. .....++..++.+++ .+|+++|+|..
T Consensus 25 ~L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG~TW~~~~~-l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~ 103 (601)
T 1w8o_A 25 ALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQV-VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVY 103 (601)
T ss_dssp EEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEE-EECCBCSSSCBEEEEEEEEECTTTCCEEEEEEE
T ss_pred eEEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCCCCCCCCEE-EecCccCCCCCccccceEEEECCCCeEEEEEEe
Confidence 35555 788888888777643 235667778889996 89997543 33321 111234666777765 37899999875
Q ss_pred ecC-------------C-CcceEEEEEecCCCCcccceeeccCCCceEec---CCCCCCcCccCCe-eEEec---CCCeE
Q 008189 137 VDH-------------K-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP---GPDVNASAFRDPT-TAWWS---NDGHW 195 (574)
Q Consensus 137 ~~~-------------~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~---~~~~~~~~fRDP~-Vvw~~---~~g~~ 195 (574)
... + ......+..|+|+| ++|.+.. ++.. .+++ ...|..|- .+-.. ..|.+
T Consensus 104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G----~TWs~~~---~~~~~~~~~~~-~~~~~~~g~gi~~~~~~~~G~l 175 (601)
T 1w8o_A 104 SQRQGFAGSRPGTDPADPNVLHANVATSTDGG----LTWSHRT---ITADITPDPGW-RSRFAASGEGIQLRYGPHAGRL 175 (601)
T ss_dssp ESSCCTTTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEEE---CGGGSCCSTTC-CEEEECSEECEECCSSTTTTCE
T ss_pred ecCCCccccccCCCccCCceEEEEEEEecCCC----CCCCCcc---cccccccCCCe-eEEEecCCeEEEccCCCcCceE
Confidence 321 0 11245788999976 8998742 1211 1121 11233442 11111 13666
Q ss_pred EEEEeeecCC-eeEEEEEEeCC-CCCCEEcccccccCCCCCccccceeEEec
Q 008189 196 RMLVGSRRKH-RGMAYLYRSRD-FMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 196 ~M~~g~~~~~-~G~i~ly~S~D-l~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
++.+...... .....++.|+| +++|+... .+. .++.| |.++++.
T Consensus 176 ~~~~~~~~g~~~~~~~~~~S~D~G~TW~~~~-~~~----~~~~~-~~v~~~~ 221 (601)
T 1w8o_A 176 IQQYTIINAAGAFQAVSVYSDDHGRTWRAGE-AVG----VGMDE-NKTVELS 221 (601)
T ss_dssp EEEEEEECTTSCEEEEEEEESSTTSSCEECC-CBC----SSCCS-EEEEECT
T ss_pred EEEEEEcCCCCceeEEEEEECCCCcCccCCC-CCC----CCCCc-CEEEEeC
Confidence 6543322111 12445666766 79999754 221 12334 4677775
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=93.17 E-value=0.6 Score=50.73 Aligned_cols=127 Identities=16% Similarity=0.169 Sum_probs=71.7
Q ss_pred eeeEEEcCCCeeEEEEeeecCC---CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCC---
Q 008189 119 SGSATVLPGNKPIILYTGVDHK---ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSND--- 192 (574)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~--- 192 (574)
.+..++-.+|+|+|||.-+... +...-+.|+|+| |+||+..+ +.| ++... ...| ...++-. .+
T Consensus 43 DPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~D-----LvhW~~~~--~aL-~d~~g-~~~~-SGSav~~-~~~~~ 111 (516)
T 3sc7_X 43 EPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTD-----LMHWAHKP--TAI-ADENG-VEAF-TGTAYYD-PNNTS 111 (516)
T ss_dssp EEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESS-----SSSCEEEE--EEE-CCBTT-EEEE-EEEEEEC-TTCTT
T ss_pred CCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCC-----CCcceecC--ccc-cCCCC-ceeE-eceEEEe-CCccc
Confidence 3443333589999999865332 234567899998 49999862 344 22110 0012 2222222 22
Q ss_pred -------CeEEEEEeeecC--CeeEEEEEEeCC-CCCCEEcc-cccccCC-----C-C--CccccceeEEeccCCCCccc
Q 008189 193 -------GHWRMLVGSRRK--HRGMAYLYRSRD-FMKWTKAK-HPIHSLA-----N-T--GMWECPDFYPVSISGKNGLD 253 (574)
Q Consensus 193 -------g~~~M~~g~~~~--~~G~i~ly~S~D-l~~W~~~~-~~l~~~~-----~-~--~~wEcPdlf~l~~~g~~~~~ 253 (574)
+.++|++.+..+ ..-...++.|.| +.+|+... .|+.... . . .-+.=|.+|..+..|
T Consensus 112 g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPkV~~~~~~g----- 186 (516)
T 3sc7_X 112 GLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSG----- 186 (516)
T ss_dssp SSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTTSCCEECTTCCSBCHHHHTTTCTTSSSSCEEEEEEEETTTT-----
T ss_pred ccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCCceEEEcCCCceEcCCCcccccccCCCcccCCeEEEECCCC-----
Confidence 247777665432 223466888887 58999864 4554321 1 1 135779999875323
Q ss_pred cccCCCCceEEEEEee
Q 008189 254 TSFAGGNEKFVLKVSL 269 (574)
Q Consensus 254 ~~~~~~~~k~vl~~s~ 269 (574)
+|+|+++.
T Consensus 187 --------~w~mv~g~ 194 (516)
T 3sc7_X 187 --------NWIMVLAH 194 (516)
T ss_dssp --------EEEEEEEC
T ss_pred --------eEEEEEEE
Confidence 77777653
|
| >4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=91.73 E-value=0.022 Score=52.47 Aligned_cols=107 Identities=10% Similarity=0.013 Sum_probs=63.9
Q ss_pred cceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccceEEEEecCCCeEEEEEEEeCCeEEEE
Q 008189 443 GPFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESF 522 (574)
Q Consensus 443 ~~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEvF 522 (574)
+.+||.++.+.+....+.+.++... +.+. ++|...+.. .... ....+++ .++..+|||.++.+.|++|
T Consensus 60 ~~~Gi~fR~~~d~~~~Y~~~i~~~~---~~~~---l~~~~~G~~-~~l~----~~~~~~~-~g~w~~l~I~~~G~~i~~~ 127 (172)
T 4azz_A 60 GAGALMFRSDKDAKNGYLANVDAKH---DLVK---FFKFENGAA-SVIA----EYKTPID-VNKKYHLKTEAEGDRFKIY 127 (172)
Confidence 4678888876665556666555331 1121 222211111 0010 0111221 3677899999999999999
Q ss_pred cCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCC
Q 008189 523 GAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMK 567 (574)
Q Consensus 523 vNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~ 567 (574)
+| |+.+++.+.+.-.. ..++|++. ++ .+.+.++++=++.
T Consensus 128 vn-G~~v~~~~D~~~~~--G~iGl~~~-~g--~~~f~ni~v~~~~ 166 (172)
T 4azz_A 128 LD-DRLVIDAHDSVFSE--GQFGLNVW-DA--TAVFQNVTKESLE 166 (172)
Confidence 96 79999998886442 46777654 22 5677777776553
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=92.47 E-value=2.6 Score=45.75 Aligned_cols=170 Identities=15% Similarity=0.129 Sum_probs=93.5
Q ss_pred eeEEE-CCEEEEEEeeCCCCC-C-CCccEEEEeecCCc-CCceecccccCCCC----CccCCCeEeeeEEEcC-CCeeEE
Q 008189 62 GPMYY-KGIYHLFYQYNPKGA-V-WGNIVWAHSVSKDL-INWEALEPALYPSK----PFDINGCWSGSATVLP-GNKPII 132 (574)
Q Consensus 62 g~~~~-~G~yHlfyq~~P~~~-~-~g~~~Wgha~S~Dl-v~W~~~~~al~P~~----~~D~~gv~SGsav~~~-dg~~~l 132 (574)
.+++- +|....||-..+.+. . .+........|+|. .+|.....+....+ +-...++..++.+++. +|+.++
T Consensus 185 aL~~~~~G~Lla~~~~r~~~~~D~~~~i~i~~~rS~DgG~tWs~~~~v~~~~~~~~~~~~~~~~~nP~lvvD~~tG~I~L 264 (523)
T 4fj6_A 185 GLVTTNNGTLLGVYDIRYNSSVDLQEKIDIGVSRSTDKGQTWEPMRVAMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWV 264 (523)
T ss_dssp EEEECTTSCEEEEEEEESSCSCCSSSSEEEEEEEESSTTSSCCCCEEEECCTTGGGCCGGGSCEEEEEEEECTTTCCEEE
T ss_pred ceEECCCCcEEEEEeceeccCCCCcCcEEEEEEEeCCCCCEeCCcEEeecccccccCccccccccCceEEEECCCCeEEE
Confidence 44553 888888887654433 2 25666778889885 89986543333221 1123678999998875 799999
Q ss_pred EEeeecC----------------CCcceEEEEEecCCCCcccceeeccCCCceEec--CCCCCCcCccCCe-eEEecCCC
Q 008189 133 LYTGVDH----------------KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFP--GPDVNASAFRDPT-TAWWSNDG 193 (574)
Q Consensus 133 ~YTg~~~----------------~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~--~~~~~~~~fRDP~-Vvw~~~~g 193 (574)
||+.... ......++..|+|+| ++|.+.. .+... .+.+ ...+.-|- .+-- .+|
T Consensus 265 ~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G----~TWs~p~--~l~~~~~~~~~-~~~~~g~G~GI~l-~dG 336 (523)
T 4fj6_A 265 VAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDG----KTWSEPI--NITSQVKDPSW-YFLLQGPGRGITM-QDG 336 (523)
T ss_dssp EEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTT----SSCCCCE--ECHHHHCCTTC-SEEEECSEECEEC-TTS
T ss_pred EEEecccccccccccccccCCCCCcceEEEEEEcCCCC----ccCCCCe--eecccccCCcc-eEEecCCCcceEE-eCC
Confidence 9874210 011245688999876 8997631 11111 1111 01112221 1112 477
Q ss_pred eEEEEEeeec-CCeeE-EEEEEeCCCCCCEEcccccccCCCCCccccceeEEec
Q 008189 194 HWRMLVGSRR-KHRGM-AYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 194 ~~~M~~g~~~-~~~G~-i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
.+++-+-... ++... ..+|+.+++.+|+... .... . .--|.++++.
T Consensus 337 rLv~P~~~~~~~g~~~s~i~~S~D~G~TW~~~~-~~~~----~-~~e~~vve~~ 384 (523)
T 4fj6_A 337 TLVFPIQFIDATRVPNAGIMYSKDRGKTWHLHN-LART----N-TTEAQVAEVE 384 (523)
T ss_dssp CEEEEEEEECTTSCEEEEEEEESSTTSSCEECC-CSEE----T-EEEEEEEEEE
T ss_pred eEEEEEEEEcCCCCEEEEEEEECCCCCeEEECC-CCCc----c-ccCCEEEEec
Confidence 7765443332 22223 3445445589999754 2211 1 2336788886
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=92.32 E-value=3 Score=45.68 Aligned_cols=146 Identities=16% Similarity=0.172 Sum_probs=79.8
Q ss_pred cee-eeEEE--CCEEEEEEeeCCCCCCC----C-------ccEEEEeecCC-cCCceecccccC---CCCCccCCCeE--
Q 008189 59 WIN-GPMYY--KGIYHLFYQYNPKGAVW----G-------NIVWAHSVSKD-LINWEALEPALY---PSKPFDINGCW-- 118 (574)
Q Consensus 59 w~N-g~~~~--~G~yHlfyq~~P~~~~~----g-------~~~Wgha~S~D-lv~W~~~~~al~---P~~~~D~~gv~-- 118 (574)
.+| .++.. +|+.+|+|.+......+ | ..+.....|+| ..+|+... .+. |...+ ...+
T Consensus 83 ~~~P~~~~d~~~g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G~TWs~~~-~~~~~~~~~~~--~~~~~~ 159 (601)
T 1w8o_A 83 FSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT-ITADITPDPGW--RSRFAA 159 (601)
T ss_dssp EEEEEEEECTTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE-CGGGSCCSTTC--CEEEEC
T ss_pred cccceEEEECCCCeEEEEEEeecCCCccccccCCCccCCceEEEEEEEecCCCCCCCCcc-cccccccCCCe--eEEEec
Confidence 344 34443 78999999764321100 1 12346677888 59999754 221 11111 2233
Q ss_pred eeeEEEcCC----CeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCe
Q 008189 119 SGSATVLPG----NKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGH 194 (574)
Q Consensus 119 SGsav~~~d----g~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~ 194 (574)
.|+.+...+ |++++-|............+.+|+|+| ++|++.. ++-. ....|.++ .-.+|+
T Consensus 160 ~g~gi~~~~~~~~G~l~~~~~~~~g~~~~~~~~~~S~D~G----~TW~~~~--~~~~--------~~~~~~v~-~~~dG~ 224 (601)
T 1w8o_A 160 SGEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHG----RTWRAGE--AVGV--------GMDENKTV-ELSDGR 224 (601)
T ss_dssp SEECEECCSSTTTTCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CBCS--------SCCSEEEE-ECTTSC
T ss_pred CCeEEEccCCCcCceEEEEEEEcCCCCceeEEEEEECCCC----cCccCCC--CCCC--------CCCcCEEE-EeCCCE
Confidence 234444433 777665543221112345678899976 8999852 3211 23456654 325788
Q ss_pred EEEEEeeecCCeeEEEEEEeCCC-CCCEEc
Q 008189 195 WRMLVGSRRKHRGMAYLYRSRDF-MKWTKA 223 (574)
Q Consensus 195 ~~M~~g~~~~~~G~i~ly~S~Dl-~~W~~~ 223 (574)
.+|+.... ...|.+.+|+|.|. .+|+..
T Consensus 225 l~~~~r~~-~~~~~~~~~~S~DgG~tW~~~ 253 (601)
T 1w8o_A 225 VLLNSRDS-ARSGYRKVAVSTDGGHSYGPV 253 (601)
T ss_dssp EEEEECCT-TCCSEEEEEEESSTTSCCCCC
T ss_pred EEEEEeCC-CCCCCEEEEEEcCCCCCCCCC
Confidence 77744221 12456789999885 899764
|
| >4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A | Back alignment and structure |
|---|
Probab=91.67 E-value=1.9 Score=40.04 Aligned_cols=53 Identities=11% Similarity=0.115 Sum_probs=39.4
Q ss_pred CCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEee
Q 008189 505 DKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNA 563 (574)
Q Consensus 505 ~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~ 563 (574)
++..+|+|.++.+.|++|+| |+.+++.+-..-. +..++|++.. +.+.+.+++|
T Consensus 131 g~w~~l~I~~~G~~i~~~vn-G~~v~~~~D~~~~--~G~iGl~~~~---~~v~F~ni~V 183 (185)
T 4b1m_A 131 NKKYHLKTEAEGDRFKIYLD-DRLVIDAHDSVFS--EGQFGLNVWD---ATAVFQNVTK 183 (185)
T ss_dssp SCCEEEEEEEETTEEEEEET-TEEEEEEECCSCC--CEEEEEEEEE---EEEEEEEEEE
T ss_pred CCeEEEEEEEECCEEEEEEC-CEEEEEEECCCCC--CCcEEEEEcC---CeEEEEEEEE
Confidence 57789999999999999996 7888887754322 1356777653 3577888775
|
| >3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* | Back alignment and structure |
|---|
Probab=91.55 E-value=4.3 Score=42.14 Aligned_cols=145 Identities=10% Similarity=0.102 Sum_probs=78.5
Q ss_pred cee-eeEEE--CC--EEEEEEeeCCCCC-CC---------CccEEEEeecCC-cCCceecccccC-----CCCCccCCCe
Q 008189 59 WIN-GPMYY--KG--IYHLFYQYNPKGA-VW---------GNIVWAHSVSKD-LINWEALEPALY-----PSKPFDINGC 117 (574)
Q Consensus 59 w~N-g~~~~--~G--~yHlfyq~~P~~~-~~---------g~~~Wgha~S~D-lv~W~~~~~al~-----P~~~~D~~gv 117 (574)
.+| -+++. .| +.+||+....... .| .....-+.+|+| .++|.+...... +. .+-..-.
T Consensus 95 v~~Pt~vv~~~tG~~~I~llvg~~~~~~~~~~~~~~~~~~~~~~l~lv~S~D~G~tWs~~~~~~~~~~~~~~-~~~~~~~ 173 (379)
T 3sil_A 95 VMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETNIHDIVTKNG-TISAMLG 173 (379)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEECCSHHHHHHHHC-SEEEEEE
T ss_pred EecCceEEeCCCCCeeEEEEEEeecCCCcceeeccccCCCCceeEEEEEccCCCCcCCCCcccccccccccc-eeeeecC
Confidence 566 55554 46 8787754222211 11 122334567777 599987321110 11 1111001
Q ss_pred EeeeEEEcCCCeeEE-EEeeecC--CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCe
Q 008189 118 WSGSATVLPGNKPII-LYTGVDH--KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGH 194 (574)
Q Consensus 118 ~SGsav~~~dg~~~l-~YTg~~~--~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~ 194 (574)
=.|+.++..+|++++ .|..... .+.....+.+|+| | .+|+... ++-. ....+|.|+-. +|+
T Consensus 174 g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G----~tW~~~~--~~~~-------~~~~ep~vvE~--dG~ 237 (379)
T 3sil_A 174 GVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-G----ITWSLPS--GYCE-------GFGSENNIIEF--NAS 237 (379)
T ss_dssp CSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-S----SSEECCS--CCEE-------CTTCCEEEEEE--TTE
T ss_pred CCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-C----CCeEECC--CCCC-------ccCCCCEEEEE--CCE
Confidence 135567778898765 2222111 1234456778988 5 8998742 2211 24689997622 688
Q ss_pred EEEEEeeecCCeeEEEEEEeCC-CCCCEEcc
Q 008189 195 WRMLVGSRRKHRGMAYLYRSRD-FMKWTKAK 224 (574)
Q Consensus 195 ~~M~~g~~~~~~G~i~ly~S~D-l~~W~~~~ 224 (574)
.+|+... .|...+|.|.| +..|+...
T Consensus 238 L~m~~R~----~g~r~v~~S~D~G~tWt~~~ 264 (379)
T 3sil_A 238 LVNNIRN----SGLRRSFETKDFGKTWTEFP 264 (379)
T ss_dssp EEEEECC----SSBCBCEEESSSSSCCEECT
T ss_pred EEEEEEe----CCCEEEEEEcCCCccCCCCc
Confidence 8888765 24445788866 68999753
|
| >2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* | Back alignment and structure |
|---|
Probab=91.51 E-value=2.1 Score=48.02 Aligned_cols=117 Identities=15% Similarity=0.168 Sum_probs=66.8
Q ss_pred EEEeecCC-cCCceecccccCCCCCccCCCeE--eeeEEEcCC----CeeEE-EEeeecCCCcceEEEEEecCCCCcccc
Q 008189 88 WAHSVSKD-LINWEALEPALYPSKPFDINGCW--SGSATVLPG----NKPII-LYTGVDHKERQVQNYAVPANPSDPYLR 159 (574)
Q Consensus 88 Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~--SGsav~~~d----g~~~l-~YTg~~~~~~~~q~lA~s~D~~d~~l~ 159 (574)
+-...|+| ..+|.... .|.+...-.....+ .|+.+...+ |++++ .|+... ....+.+|+|+| +
T Consensus 428 i~v~~S~DgG~TWs~p~-~l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~----~~s~i~~SdDgG----~ 498 (679)
T 2sli_A 428 LAMRYSDDEGASWSDLD-IVSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSS----AELGFMYSDDHG----D 498 (679)
T ss_dssp EEEEEESSTTSSCCCCE-ECGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESS----CSEEEEEESSTT----S
T ss_pred EEEEEeCCCCccCCCCc-ccCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCC----CEEEEEEECCCC----C
Confidence 45567887 59998653 22221100111222 234455445 77665 333321 245678999986 8
Q ss_pred eeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcc
Q 008189 160 KWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRD-FMKWTKAK 224 (574)
Q Consensus 160 ~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~D-l~~W~~~~ 224 (574)
+|++.. .+ .|.+ ....+|.|+ .-.+|..+|+.... .|++.+|+|.| +.+|+...
T Consensus 499 TW~~~~--~~--~p~~---~~~~e~~vv-e~~dG~L~~~~R~~---~G~~~v~~S~DgG~TWt~~~ 553 (679)
T 2sli_A 499 NWTYVE--AD--NLTG---GATAEAQIV-EMPDGSLKTYLRTG---SNCIAEVTSIDGGETWSDRV 553 (679)
T ss_dssp SCEEEE--CC--CCCS---CCCCCEEEE-ECTTSCEEEEECCS---SSSCEEEEESSTTSSCCCCE
T ss_pred ceEeCc--cC--CCCC---CCccceEEE-EeCCCEEEEEEEeC---CCCEEEEEEcCCCcCCCCCc
Confidence 999752 11 1111 356788865 33578888876543 25667899988 68998653
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=91.29 E-value=1.2 Score=47.16 Aligned_cols=125 Identities=13% Similarity=0.191 Sum_probs=67.5
Q ss_pred EEEEeecCC-cCCceecccccCCC--CCccC-CCeEeeeEEEcCC----CeeEE-EEeeecCCCcceEEEEEecCCCCcc
Q 008189 87 VWAHSVSKD-LINWEALEPALYPS--KPFDI-NGCWSGSATVLPG----NKPII-LYTGVDHKERQVQNYAVPANPSDPY 157 (574)
Q Consensus 87 ~Wgha~S~D-lv~W~~~~~al~P~--~~~D~-~gv~SGsav~~~d----g~~~l-~YTg~~~~~~~~q~lA~s~D~~d~~ 157 (574)
+.....|+| ..+|... ..|.+. ..+.. .+.-.|+.+...+ |++++ .|... ..+.....+.+|+|+|
T Consensus 188 ~~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~-~~g~~~~~v~~S~D~G--- 262 (449)
T 2bf6_A 188 YINLVYSDDDGKTWSEP-QNINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTN-EKGKQSSAVIYSDDSG--- 262 (449)
T ss_dssp EEEEEEESSTTSSCCCC-EECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEEC-TTCCEEEEEEEESSTT---
T ss_pred EEEEEEEcCCCccCCCC-ccCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEc-CCCCEEEEEEEECCCC---
Confidence 345677887 5999863 222211 11111 0222344444444 67665 34322 1233456688999876
Q ss_pred cceeeccCCCceEec---CCC-------C--CCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEc
Q 008189 158 LRKWIKPDNNPVVFP---GPD-------V--NASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRD-FMKWTKA 223 (574)
Q Consensus 158 l~~w~k~~~~Pvi~~---~~~-------~--~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~D-l~~W~~~ 223 (574)
.+|+... ++... +.+ . ...+..+|.|+-. ++|+.+|+.... .|.+.+|+|.| +.+|+..
T Consensus 263 -~tW~~~~--~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vve~-~dG~l~~~~R~~---~g~~~v~~S~D~G~TWs~~ 334 (449)
T 2bf6_A 263 -KNWTIGE--SPNDNRKLENGKIINSKTLSDDAPQLTECQVVEM-PNGQLKLFMRNL---SGYLNIATSFDGGATWDET 334 (449)
T ss_dssp -SSCEECC--CTTTTEECTTSCEECTTTCCCSTTCEEEEEEEEC-TTSCEEEEEEES---SSEEEEEEESSTTSCCCSC
T ss_pred -CceeECC--ccCcccccccccccccccccccCCCCCCCEEEEe-cCCEEEEEEEeC---CCCEEEEEECCCCccccCc
Confidence 8998753 21110 000 0 0123457776533 578888886543 35678999977 6899753
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=90.89 E-value=1.3 Score=46.02 Aligned_cols=136 Identities=17% Similarity=0.200 Sum_probs=77.1
Q ss_pred cee-eeEEE-CCEEEEEEeeCCCC----C---------------CC-CccEEEEeecCC-cCCceecccccCC---CCCc
Q 008189 59 WIN-GPMYY-KGIYHLFYQYNPKG----A---------------VW-GNIVWAHSVSKD-LINWEALEPALYP---SKPF 112 (574)
Q Consensus 59 w~N-g~~~~-~G~yHlfyq~~P~~----~---------------~~-g~~~Wgha~S~D-lv~W~~~~~al~P---~~~~ 112 (574)
..| -++.. +|+.+|||.+++.. . .| ...+....+|+| ..+|... ..|.+ ...|
T Consensus 102 ~~~Pt~v~~~~g~I~l~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G~TWs~p-~~l~~~~~~~~~ 180 (386)
T 2xzi_A 102 WGNPTPVVDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDGNTWSKP-VDLTKELTPDGW 180 (386)
T ss_dssp EEEEEEEECTTSCEEEEEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTTSCCCCC-EECHHHHSCTTC
T ss_pred ccccEEEEeCCCCEEEEEEeccccccccCcceeccCceecccccccccccEEEEEEECCCCccCCCc-ccCccccccccc
Confidence 345 55666 79999999764421 0 01 123455677887 6999853 22211 1122
Q ss_pred cCCCeEeeeEEEcCCCeeEEEEeeecCCCcceEEEEEecC--CCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec
Q 008189 113 DINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPAN--PSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS 190 (574)
Q Consensus 113 D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D--~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~ 190 (574)
.....-.|+.+...+|++++-.. ..+.+|+| +| .+|+... ++ +. -.+|.|+-.
T Consensus 181 ~~~~~~~g~gI~l~dGrLv~p~~---------~~~~~S~D~~~G----~tW~~~~--~~---~~------~~e~~vve~- 235 (386)
T 2xzi_A 181 AWDAVGPGNGIRLTTGELVIPAM---------GRNIIGRGAPGN----RTWSVQR--LS---GA------GAEGTIVQT- 235 (386)
T ss_dssp CSCCBCSSCCEECTTSCEEEEET---------TEEEEEESSTTS----CEEEEEE--CT---TC------CSSEEEEEC-
T ss_pred eeeccCCccEEEecCCEEEEEeE---------EEEEEccCCCCC----CcccccC--cC---CC------CCcCEEEEe-
Confidence 21111224445556888765433 24567888 65 8998642 21 11 157776533
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEc
Q 008189 191 NDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKA 223 (574)
Q Consensus 191 ~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~ 223 (574)
++|+.+|+.... ..+...+|+|.| .+|+..
T Consensus 236 ~dG~L~~~~r~~--~g~~r~v~~S~D-~tWt~~ 265 (386)
T 2xzi_A 236 PDGKLYRNDRPS--QKGYRMVARGTL-EGFGAF 265 (386)
T ss_dssp TTSCEEEEECCS--SSEEEEEEEEET-TEECCC
T ss_pred CCCcEEEEEeCC--CCccEEEEEEeC-CccCcc
Confidence 578888776442 222467999999 999854
|
| >1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... | Back alignment and structure |
|---|
Probab=90.41 E-value=4.8 Score=44.79 Aligned_cols=148 Identities=14% Similarity=0.174 Sum_probs=80.1
Q ss_pred Ccee-eeEEECCEEEEEE-eeCCCCCC----CCccEEEE------e-ecCC-cC-----CceecccccCCC--CCccC--
Q 008189 58 HWIN-GPMYYKGIYHLFY-QYNPKGAV----WGNIVWAH------S-VSKD-LI-----NWEALEPALYPS--KPFDI-- 114 (574)
Q Consensus 58 gw~N-g~~~~~G~yHlfy-q~~P~~~~----~g~~~Wgh------a-~S~D-lv-----~W~~~~~al~P~--~~~D~-- 114 (574)
..+| -++..+|+.+||+ .|+..... ++...|+. + .|+| .. +|.+. ..|.+. ..+..
T Consensus 107 ~v~~PTtVv~gg~I~LL~g~y~~~~~~~~~~~~~~~~~llLVkG~V~~S~D~Gktsk~ItWs~p-~~L~~~~~~~~~~~~ 185 (648)
T 1ms9_A 107 RVVDPTVIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGSP-VSLKEFFPAEMEGMH 185 (648)
T ss_dssp EEEEEEEEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECCC-EECGGGCCSBSSSSB
T ss_pred EeeccceeeecccEEEEEEeecCCcccccccccCCCcceEEEEeeeccccccccccceeeccCc-ccCccccccccccce
Confidence 3455 6677889999998 34332211 12234554 2 4665 34 79753 223221 11110
Q ss_pred -CCeE--eeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecC
Q 008189 115 -NGCW--SGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSN 191 (574)
Q Consensus 115 -~gv~--SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~ 191 (574)
.... .|+.++..||++++=..+....+.....+.+|+|.+ .+|+... ++ + .....+|.|+=.
T Consensus 186 ~~~~~~GgGsGI~m~dGtLVfPv~~~~~~g~~~s~iiySdD~G----~TW~ls~--~~--~-----~~gc~EpsVvEw-- 250 (648)
T 1ms9_A 186 TNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFGK--GR--S-----AFGCSEPVALEW-- 250 (648)
T ss_dssp EEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEECS--CC--C-----CTTEEEEEEEEE--
T ss_pred eEEEEecCCceEEecCCcEEEEEEEEcccccceeeEEEecCCC----CCEEECC--CC--C-----CCCccceEEEEE--
Confidence 1111 355566778987652212122233445677898875 8998752 22 1 135689997622
Q ss_pred CCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcc
Q 008189 192 DGHWRMLVGSRRKHRGMAYLYRSRD-FMKWTKAK 224 (574)
Q Consensus 192 ~g~~~M~~g~~~~~~G~i~ly~S~D-l~~W~~~~ 224 (574)
+|+.+|..... . |+..+|+|.| +..|+...
T Consensus 251 dG~Lmm~~R~~-~--g~R~Vy~S~D~G~TWte~~ 281 (648)
T 1ms9_A 251 EGKLIINTRVD-Y--RRRLVYESSDMGNTWLEAV 281 (648)
T ss_dssp TTEEEEEEEET-T--SCCCEEEESSTTSSCEECT
T ss_pred CCEEEEEEEcc-C--CcEEEEEecCCCccccccc
Confidence 57755554432 2 4445788877 68998754
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=88.35 E-value=8.4 Score=40.65 Aligned_cols=71 Identities=14% Similarity=0.053 Sum_probs=45.3
Q ss_pred eEE-ECCEEEEEEeeCCCCCC---CCccEEEEeecCCc-CCceecccccCCCCCccCCCeEeeeEEEcC-CCeeEEEEee
Q 008189 63 PMY-YKGIYHLFYQYNPKGAV---WGNIVWAHSVSKDL-INWEALEPALYPSKPFDINGCWSGSATVLP-GNKPIILYTG 136 (574)
Q Consensus 63 ~~~-~~G~yHlfyq~~P~~~~---~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~-dg~~~l~YTg 136 (574)
++. -+|+...||...+.+.. .+.+......|+|. .+|+...... ... ...+.+.++.+++. .|+++|+|+.
T Consensus 28 l~~~~~G~lla~~~~r~~~~~d~~~~~~~i~~~rS~DgG~TWs~~~~v~-~~~--~~~~~~dp~l~~d~~~G~i~l~~~~ 104 (449)
T 2bf6_A 28 LFKTKEGTLIASIDARRHGGADAPNNDIDTAVRRSEDGGKTWDEGQIIM-DYP--DKSSVIDTTLIQDDETGRIFLLVTH 104 (449)
T ss_dssp EEECTTSCEEEEEEEETTSSCCTTSSCEEEEEEEESSTTSSCCCCEEEE-CCS--TTCEEEEEEEEECTTTCCEEEEEEE
T ss_pred EEECCCCCEEEEEeCccCccccCCCCcceEEEEEcCCCCCCCCCCEEee-cCC--CccccccceeEEECCCCeEEEEEec
Confidence 444 37888888876655321 23467888999996 8999754332 221 11456667777664 6899998874
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=87.32 E-value=2.2 Score=43.96 Aligned_cols=147 Identities=14% Similarity=0.130 Sum_probs=78.5
Q ss_pred cee-eeEEE--CCEEEEEEeeCCCCC-C-------CCccEEEEeecCC-cCCceecccccCCC------CCccCCCeEee
Q 008189 59 WIN-GPMYY--KGIYHLFYQYNPKGA-V-------WGNIVWAHSVSKD-LINWEALEPALYPS------KPFDINGCWSG 120 (574)
Q Consensus 59 w~N-g~~~~--~G~yHlfyq~~P~~~-~-------~g~~~Wgha~S~D-lv~W~~~~~al~P~------~~~D~~gv~SG 120 (574)
.+| .+++. +|+.+|+|.+.+... . ....+.....|+| ..+|+... .|.+. ..+.....-.|
T Consensus 86 ~~~P~~v~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~~-~l~~~~~g~~~~~~~~~~~~pg 164 (382)
T 1so7_A 86 SMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPR-DLTDAAIGPAYREWSTFAVGPG 164 (382)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCCE-ECHHHHHGGGGGGEEEEEECSS
T ss_pred cccceEEEECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCCc-cCChhhcCCCCCCceeeccCCC
Confidence 455 45554 588999987665321 1 1123456777887 59998631 12111 11110000113
Q ss_pred eEEEcCC--CeeEE-EEeeecC----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeE-E-ecC
Q 008189 121 SATVLPG--NKPII-LYTGVDH----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTA-W-WSN 191 (574)
Q Consensus 121 sav~~~d--g~~~l-~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vv-w-~~~ 191 (574)
+.+...+ |++++ .|..... .......+.+|+|+| .+|+... ++ .. ....+.++ + ...
T Consensus 165 ~gi~l~~~~G~lv~p~~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~-~~-------~~~~~~~~~~~~~~ 230 (382)
T 1so7_A 165 HCLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHG----RTWARGH--FV-AQ-------DTLECQVAEVETGE 230 (382)
T ss_dssp CCEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTT----SSCEECC--CC-SB-------SEEEEEEEEEEC--
T ss_pred cEeecccCCCcEEEEEEEecccccccCCCceeEEEEECCCC----ceeEcCc--cc-CC-------CCCccEEEEEEECC
Confidence 4555566 88766 5544221 013455678999876 8999853 21 10 11223322 2 114
Q ss_pred CCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEc
Q 008189 192 DGHWRMLVGSRRKHRGMAYLYRSRD-FMKWTKA 223 (574)
Q Consensus 192 ~g~~~M~~g~~~~~~G~i~ly~S~D-l~~W~~~ 223 (574)
+|..+|+.... .|...+|+|.| +.+|+..
T Consensus 231 dg~l~~~~r~~---~g~~~v~~S~D~G~tW~~~ 260 (382)
T 1so7_A 231 QRVVTLNARSH---LRARVQAQSTNDGLDFQES 260 (382)
T ss_dssp CEEEEEEEEES---SSEEEEEEESSTTSSCCCC
T ss_pred CCEEEEEEecC---CCCEEEEEEcCCCCCCCCC
Confidence 67877776543 24678999987 6899864
|
| >2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* | Back alignment and structure |
|---|
Probab=87.29 E-value=8.3 Score=43.28 Aligned_cols=115 Identities=21% Similarity=0.284 Sum_probs=62.1
Q ss_pred EEEeecCC-cCCceecccccCCCCCccCCCeE--eeeEEE-cCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeec
Q 008189 88 WAHSVSKD-LINWEALEPALYPSKPFDINGCW--SGSATV-LPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIK 163 (574)
Q Consensus 88 Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~--SGsav~-~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k 163 (574)
.....|+| ..+|+.. ..|.+.........+ .|+.+. ..+|++++.+... ....+.+|+|+| ++|++
T Consensus 448 ~~v~rS~DgG~TWs~p-~~l~~~~~~~~~~~~~~pg~GI~~~~~GrLv~p~~~~-----~~s~v~~S~DgG----~TW~~ 517 (686)
T 2jkb_A 448 IAMTTSQNRGESWEQF-KLLPPFLGEKHNGTYLCPGQGLALKSSNRLIFATYTS-----GELTYLISDDSG----QTWKK 517 (686)
T ss_dssp EEEEEESSTTSCCCCC-EECCCSSCTTSCCCEECSEECEECTTSSCEEEEEEET-----TEEEEEEESSTT----SSCEE
T ss_pred EEEEEECCCCCcCCCC-eecccccCcccceeeeCCCcceEEccCCeEEEEEecC-----CcEEEEEECCCC----CeeEe
Confidence 34456777 4899874 233221110011112 223333 3478776644322 234678999986 89998
Q ss_pred cCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEc
Q 008189 164 PDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRD-FMKWTKA 223 (574)
Q Consensus 164 ~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~D-l~~W~~~ 223 (574)
.. ++. |.+ ...-.|.++-. .+|.++|++... .|.+.+|+|.| +.+|+..
T Consensus 518 ~~--~~~--p~~---~~~~e~~ivel-~dG~L~~~~R~~---~G~~~v~~S~DgG~TWs~~ 567 (686)
T 2jkb_A 518 SS--ASI--PFK---NATAEAQMVEL-RDGVIRTFFRTT---TGKIAYMTSRDSGETWSKV 567 (686)
T ss_dssp EE--EEC--SCS---SCCCCEEEEEE-ETTEEEEEECCS---SSSCEEEEESSTTSSCCCC
T ss_pred Cc--ccC--CCC---CCceeeEEEEe-cCCEEEEEEEcC---CCcEeEEEeCCCCCCCccc
Confidence 52 221 111 22345665422 578888765432 24456889977 6899864
|
| >2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* | Back alignment and structure |
|---|
Probab=86.75 E-value=2.1 Score=45.71 Aligned_cols=126 Identities=20% Similarity=0.265 Sum_probs=68.1
Q ss_pred EEEEeecCC-cCCceecccccCCC--CCccCC-CeEeeeEEEcCC----CeeEE-EEeeecC---CCcceEEEEEecCCC
Q 008189 87 VWAHSVSKD-LINWEALEPALYPS--KPFDIN-GCWSGSATVLPG----NKPII-LYTGVDH---KERQVQNYAVPANPS 154 (574)
Q Consensus 87 ~Wgha~S~D-lv~W~~~~~al~P~--~~~D~~-gv~SGsav~~~d----g~~~l-~YTg~~~---~~~~~q~lA~s~D~~ 154 (574)
+.-..+|+| ..+|... ..|.+. ..+... +.-.|+.++..+ |++++ +|+.... .+.....+.+|+|.|
T Consensus 215 ~~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G 293 (471)
T 2w20_A 215 YLWMSYSDDDGKTWSAP-QDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHG 293 (471)
T ss_dssp EEEEEEESSTTSSCCCC-EECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTT
T ss_pred eEEEEEECCCcCcCCCC-cccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCC
Confidence 345677888 5999863 223221 112110 111234455555 77765 4543211 122356788999976
Q ss_pred CcccceeeccCCCceEec-C-CC-------CC--CcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEE
Q 008189 155 DPYLRKWIKPDNNPVVFP-G-PD-------VN--ASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRD-FMKWTK 222 (574)
Q Consensus 155 d~~l~~w~k~~~~Pvi~~-~-~~-------~~--~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~D-l~~W~~ 222 (574)
++|+... ++-.. + .+ .. .....+|.++ .-++|..+|+.... .|.+.+|+|.| +.+|+.
T Consensus 294 ----~TW~~~~--~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vv-e~~dG~L~~~~R~~---~G~~~v~~S~DgG~TWs~ 363 (471)
T 2w20_A 294 ----KTWHAGE--AVNDNRQVDGQKIHSSTMNNRRAQNTESTVV-QLNNGDVKLFMRGL---TGDLQVATSKDGGVTWEK 363 (471)
T ss_dssp ----SSCEECC--CTTTTEEETTEEECTTTCCCGGGCCCSEEEE-ECTTSCEEEEECCS---SSEEEEEEESSSSSSCCS
T ss_pred ----CCcccCC--ccCcccccCccccccccccccCcCccCCEEE-EcCCCeEEEEEEeC---CCCEEEEEEcCCCcCCCC
Confidence 8999753 22110 0 01 00 0124688865 33578888876432 35678999977 689975
Q ss_pred c
Q 008189 223 A 223 (574)
Q Consensus 223 ~ 223 (574)
.
T Consensus 364 ~ 364 (471)
T 2w20_A 364 D 364 (471)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A* | Back alignment and structure |
|---|
Probab=84.78 E-value=4.7 Score=45.95 Aligned_cols=152 Identities=9% Similarity=-0.004 Sum_probs=83.1
Q ss_pred eeEEECCEEEE-EEeeCCCCCCCCccEEEEee-cCCcCCcee-cccccCCCCCccCCCeEeeeEEEcC--CCeeEEEEee
Q 008189 62 GPMYYKGIYHL-FYQYNPKGAVWGNIVWAHSV-SKDLINWEA-LEPALYPSKPFDINGCWSGSATVLP--GNKPIILYTG 136 (574)
Q Consensus 62 g~~~~~G~yHl-fyq~~P~~~~~g~~~Wgha~-S~Dlv~W~~-~~~al~P~~~~D~~gv~SGsav~~~--dg~~~l~YTg 136 (574)
.-+|.||+.++ -.... ........||-.. |+|+.++-. ...-+.+...++ .+---++++... +|.+++|+.+
T Consensus 168 ~~f~~dG~l~~~~~~~~--~~~~~~~~~G~~~~s~dG~~~~~~v~~~~~~~~~f~-~~yRIPaL~~~~~~~GtLLA~ad~ 244 (781)
T 1w0p_A 168 ASFYFDGKLIRDNIQPT--ASKQNMIVWGNGSSNTDGVAAYRDIKFEIQGDVIFR-GPDRIPSIVASSVTPGVVTAFAEK 244 (781)
T ss_dssp EEEEETTEEEEEEECCE--ECCCCEEEEEECCSSSCEEEEEEEEEEEECCEEEEC-TTCEEEEEEECSSSTTCEEEEEEE
T ss_pred eEEecCCcEEEEeccCC--CCcccEEEeccccccCCCcccceeEEEecCCCcccC-CCCcCcEEEEccCCCCeEEEEEcc
Confidence 35778998887 32211 1111245577776 688876642 222222222221 121235555555 6999999987
Q ss_pred ecCC---C----cceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-----
Q 008189 137 VDHK---E----RQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK----- 204 (574)
Q Consensus 137 ~~~~---~----~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~----- 204 (574)
.... + .-.+.+..|+|+| ++|... ..|......-....++||.++...++|.+++++.....
T Consensus 245 R~~~~D~g~~~~~~~Iv~rRS~DgG----~TWs~~--~~v~~~~~~~~~~~~~dP~~v~D~~tG~I~lf~~~~~~~~~~e 318 (781)
T 1w0p_A 245 RVGGGDPGALSNTNDIITRTSRDGG----ITWDTE--LNLTEQINVSDEFDFSDPRPIYDPSSNTVLVSYARWPTDAAQN 318 (781)
T ss_dssp EETCSSTTCTTCEEEEEEEEESSSS----SSCCCC--EESSGGGCTTSCEEEEEEEEEEETTTTEEEEEEEEEETTCCSG
T ss_pred cccCCCcccccCCceEEEEEcCCCC----cccCCc--EEEecCCCCCCCCeeeCCEEEEECCCCEEEEEEEeccCCcccc
Confidence 6321 1 1125677899986 899852 12222211111367899997776557888877643211
Q ss_pred -------CeeEEEEEEe-CCCCCCEE
Q 008189 205 -------HRGMAYLYRS-RDFMKWTK 222 (574)
Q Consensus 205 -------~~G~i~ly~S-~Dl~~W~~ 222 (574)
....+.+.+| +++..|..
T Consensus 319 g~~~~~~~~~~v~~~~S~D~G~TWS~ 344 (781)
T 1w0p_A 319 GDRIKPWMPNGIFYSVYDVASGNWQA 344 (781)
T ss_dssp GGCCCTTSCCEEEEEEEETTTTEECC
T ss_pred ccccccCCCceEEEEEecCCCCcccC
Confidence 0134566666 45789975
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=84.56 E-value=4.2 Score=41.73 Aligned_cols=100 Identities=9% Similarity=0.074 Sum_probs=59.5
Q ss_pred CeEe-eeEE-EcCCCeeEEEEeeecCC---CcceEEEEEecCCCCcccc----eeeccCCCceEecCCCCCCcCccCCee
Q 008189 116 GCWS-GSAT-VLPGNKPIILYTGVDHK---ERQVQNYAVPANPSDPYLR----KWIKPDNNPVVFPGPDVNASAFRDPTT 186 (574)
Q Consensus 116 gv~S-Gsav-~~~dg~~~l~YTg~~~~---~~~~q~lA~s~D~~d~~l~----~w~k~~~~Pvi~~~~~~~~~~fRDP~V 186 (574)
.+|. ++.+ ...+|.+++++.+.... ....+.+..|+|++ + +|.+. .++.... .....+++|.+
T Consensus 20 ~s~riP~Lv~~~~~G~l~a~~e~~~~~~~~~~~~i~~~rS~D~G----~~~~~tW~~~---~~~~~~~-~~~~~~~~P~~ 91 (382)
T 1so7_A 20 HAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDA----PTHQVQWQAQ---EVVAQAR-LDGHRSMNPCP 91 (382)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEG----GGTEEEECCC---EECTTSC-CTTEEEEEEEE
T ss_pred eEEEeCeEEEECCCCeEEEEEccCcCCCCCCCCEEEEEEeeeCC----ccccceeCCc---EEeccCC-CCCCccccceE
Confidence 3454 6766 55689988898875321 11125667888875 7 99852 2232211 11245789986
Q ss_pred EEecCCCeEEEEEeeecC------------CeeEEEEEEeCC-CCCCEEc
Q 008189 187 AWWSNDGHWRMLVGSRRK------------HRGMAYLYRSRD-FMKWTKA 223 (574)
Q Consensus 187 vw~~~~g~~~M~~g~~~~------------~~G~i~ly~S~D-l~~W~~~ 223 (574)
+....+|..+|+++.... ....+.+++|+| +++|+..
T Consensus 92 v~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~ 141 (382)
T 1so7_A 92 LYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSP 141 (382)
T ss_dssp EECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCC
T ss_pred EEECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCC
Confidence 665446787777764321 123567888876 6899754
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=82.35 E-value=15 Score=37.75 Aligned_cols=158 Identities=13% Similarity=0.075 Sum_probs=88.4
Q ss_pred eeEEE-CCEEEEEEeeCCCC-CCCCccEEEEeecC---Cc----CCceecccccCCCCCccCCCeEeeeEEEcCCCeeEE
Q 008189 62 GPMYY-KGIYHLFYQYNPKG-AVWGNIVWAHSVSK---DL----INWEALEPALYPSKPFDINGCWSGSATVLPGNKPII 132 (574)
Q Consensus 62 g~~~~-~G~yHlfyq~~P~~-~~~g~~~Wgha~S~---Dl----v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l 132 (574)
.++.. +|..-.||-..+.. ..++...+....|+ |. .+|... ..|.... ...+..++.+++.+|+++|
T Consensus 42 sLv~~~~G~l~A~~e~~~~~~~d~g~~~i~~~rS~~~~D~G~~~~tW~~~-~~l~~~~---~~~~~~Pt~v~~~~g~I~l 117 (386)
T 2xzi_A 42 AVVRTTTGRILAFAEGRRHTNQDFGDINLVYKRTKTTANNGASPSDWEPL-REVVGSG---AGTWGNPTPVVDDDNTIYL 117 (386)
T ss_dssp EEEECTTSCEEEEEEEESSSSCSSSSEEEEEEEBSSSSSTTCSGGGBCCC-EEEECCS---SSEEEEEEEEECTTSCEEE
T ss_pred EEEEeCCCcEEEEEEeeeCCCCCCCceeEEEEEeeeecCCCcCceeccCc-EEEeeCC---CCcccccEEEEeCCCCEEE
Confidence 56666 78888888665542 33467778888898 86 799854 3343332 2345667777654789999
Q ss_pred EEeeec------CC-----------------CcceEEEEEecCCCCcccceeeccCCCceEe--cCCCCCCcCccCCe-e
Q 008189 133 LYTGVD------HK-----------------ERQVQNYAVPANPSDPYLRKWIKPDNNPVVF--PGPDVNASAFRDPT-T 186 (574)
Q Consensus 133 ~YTg~~------~~-----------------~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~--~~~~~~~~~fRDP~-V 186 (574)
+|+... .. ......+..|+|+| ++|.+. ..|.. .++.+. ..+..|- -
T Consensus 118 ~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G----~TWs~p--~~l~~~~~~~~~~-~~~~~~g~g 190 (386)
T 2xzi_A 118 FLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDG----NTWSKP--VDLTKELTPDGWA-WDAVGPGNG 190 (386)
T ss_dssp EEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTT----SCCCCC--EECHHHHSCTTCC-SCCBCSSCC
T ss_pred EEEeccccccccCcceeccCceecccccccccccEEEEEEECCCC----ccCCCc--ccCccccccccce-eeccCCccE
Confidence 996321 00 11245678888875 899752 12211 111211 1223441 1
Q ss_pred EEecCCCeEEEEEeeecCCeeEEEEEEeC--CCCCCEEcccccccCCCCCccccceeEEec
Q 008189 187 AWWSNDGHWRMLVGSRRKHRGMAYLYRSR--DFMKWTKAKHPIHSLANTGMWECPDFYPVS 245 (574)
Q Consensus 187 vw~~~~g~~~M~~g~~~~~~G~i~ly~S~--Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~ 245 (574)
+-. .+|++++-+- ...+|+.+ .+.+|+... .+.. .-| |.++++.
T Consensus 191 I~l-~dGrLv~p~~-------~~~~~S~D~~~G~tW~~~~-~~~~-----~~e-~~vve~~ 236 (386)
T 2xzi_A 191 IRL-TTGELVIPAM-------GRNIIGRGAPGNRTWSVQR-LSGA-----GAE-GTIVQTP 236 (386)
T ss_dssp EEC-TTSCEEEEET-------TEEEEEESSTTSCEEEEEE-CTTC-----CSS-EEEEECT
T ss_pred EEe-cCCEEEEEeE-------EEEEEccCCCCCCcccccC-cCCC-----CCc-CEEEEeC
Confidence 222 4677665432 13455445 589999643 3321 123 4688885
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 574 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 9e-91 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 2e-76 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 7e-32 | |
| d1y4wa1 | 164 | b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus a | 4e-22 | |
| d1uypa1 | 138 | b.29.1.19 (A:295-432) Beta-fructosidase (invertase | 1e-05 | |
| d1yrza2 | 317 | b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-termina | 2e-04 | |
| d1gyha_ | 318 | b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cell | 0.002 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 281 bits (720), Expect = 9e-91
Identities = 88/356 (24%), Positives = 129/356 (36%), Gaps = 40/356 (11%)
Query: 44 KQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWE 100
Q +R +HF P K+W+N G +Y+ G YHLF+QYNP G WGNI W H++S+DL +WE
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 101 ALEPALYPSKPFDI--NGCWSGSATVLPGNKP----------IILYTGV----------- 137
AL +SGSA N + +YT
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 138 -DHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGP---DVNASAFRDPTTAWWSNDG 193
+++Q Q+ A D L NPV+ P + FRDP W
Sbjct: 124 TVQEDQQSQSIAY---SLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQ 180
Query: 194 HWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLD 253
W ++ H+ +Y S + W A G+WECP + + N
Sbjct: 181 KWVVVTSIAELHK--LAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNSTK 238
Query: 254 TSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDRYVPDKDSVDGWRGLRYDYG-NFYAS 312
G + Y +G ++ D D+G +FYA+
Sbjct: 239 WVITSGLNPGGPPG--TVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDFYAA 296
Query: 313 KTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSGKQ--LLQWP 366
+ N + GW N + W IPR + L G + L+Q P
Sbjct: 297 AGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 242 bits (617), Expect = 2e-76
Identities = 94/328 (28%), Positives = 145/328 (44%), Gaps = 41/328 (12%)
Query: 46 LHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEAL 102
L + +HF P W+N G +++KG YH+FYQYNP+ WGNI W H+VS DL++W L
Sbjct: 1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHL 60
Query: 103 EPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWI 162
A + +G +SGSA G ++YT ++
Sbjct: 61 PVA--LYPDDETHGVFSGSAVEKDGK-MFLVYTYYRDPTHNKGEKETQCVVMSENGLDFV 117
Query: 163 KPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-HRGMAYLYRSRDFMKWT 221
K D NPV+ P+ AFRDP +G WRM++GS + G LY S D W
Sbjct: 118 KYDGNPVISKPPEEGTHAFRDPKVNRS--NGEWRMVLGSGKDEKIGRVLLYTSDDLFHW- 174
Query: 222 KAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGT 281
K + I T ECPD + EK +L S+ T +++G
Sbjct: 175 KYEGAIFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMGE 219
Query: 282 YNRDKDRYVPDKDSVDGWRGLRYDYG-NFYASKTFFDSRKNRRILWGWANE--SDSTFDD 338
+ ++ + D+G +FYA++TFF +R ++ GW +
Sbjct: 220 L---------KEGKLNVEKRGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPT 268
Query: 339 MAKGWAGVQTIPREVWLDGSGKQLLQWP 366
+GW GV ++PRE++++ +L P
Sbjct: 269 KREGWNGVMSLPRELYVE--NNELKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 125 bits (316), Expect = 7e-32
Identities = 48/356 (13%), Positives = 90/356 (25%), Gaps = 88/356 (24%)
Query: 66 YKGIYHLFYQYNPKGAVWGN---IVWAHSVSKDLINWEALEPALYPSKPFDINGC----- 117
Y G + +F + + + +W+ S FD N
Sbjct: 67 YHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQ 126
Query: 118 ---WSGSATVLPGNKPIILYTGVDHKERQVQN--YAVPANPSDPYLRKWIKPDNNPVVFP 172
WSGSAT K + YT K Q A + ++ +F
Sbjct: 127 TQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFD 186
Query: 173 GPDVNAS-----------------AFRDPTTAWWSNDGHWRMLVGS-------------- 201
G RDP + + GH ++ +
Sbjct: 187 GDGKTYQNVQQFIDEGNYSSGDNHTLRDP--HYVEDKGHKYLVFEANTGTEDGYQGEESL 244
Query: 202 -----------------------------RRKHRGMAYLYRSRDFMKWTKAKHPIHSLAN 232
+ + + + D+ K I S
Sbjct: 245 FNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTV 304
Query: 233 TGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYYTIGTYNRDKDR--YV 290
T E + + + +GK L T K+++D + + Y + Y
Sbjct: 305 TDEIERANVFKM--NGKWYLFTD------SRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 356
Query: 291 PDKDS-VDGWRGLRYDYGNF-YASKTFFDSRKNRRILWGWANESDSTFDDMAKGWA 344
P + + L + F Y+ ++ N ++ + D +A
Sbjct: 357 PLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYA-DKQSTFA 411
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 164 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 90.8 bits (225), Expect = 4e-22
Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 19/163 (11%)
Query: 414 KAEKFDPSWKNL-DAEHLCGKIGS--------KVQGGVGPFGLLTLASKNLEEFTPVFFR 464
K + ++K L + G + F + AS N E T V +
Sbjct: 9 KRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSAKSKASTFAIALRASANFTEQTLVGYD 68
Query: 465 IFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGA 524
K + + L + + + S S + L +D S VE FG
Sbjct: 69 FAK---QQIFLDRTHSGDVSFDETF---ASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGG 122
Query: 525 GGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMK 567
G+T +T++++P+ D H + G T + + + +
Sbjct: 123 QGETTLTAQIFPSS---DAVHARLASTG-GTTEDVRADIYKIA 161
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 43.0 bits (101), Expect = 1e-05
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 503 LSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPT 537
+ +R+ +D VE F + R++P
Sbjct: 80 EDEATNRIRAFLDSCSVEFFFNDS-IAFSFRIHPE 113
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Score = 41.1 bits (95), Expect = 2e-04
Identities = 28/175 (16%), Positives = 52/175 (29%), Gaps = 12/175 (6%)
Query: 73 FYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLP-----G 127
+Y + + HS +DL +W + L + D+ G + P
Sbjct: 23 YYIATSTFEWFPGVRIHHS--RDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSYHD 80
Query: 128 NKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTA 187
++YT V ++ + P ++P+ + S F D
Sbjct: 81 GTFYLIYTDVKQWHGAFKDAHNYLVTAQN----IEGPWSDPIYLNSSGFDPSLFHDDDGR 136
Query: 188 WWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFY 242
W + W G+ G+ S K I+ + + E P Y
Sbjct: 137 KWLVNMIWDYRKGNHP-FAGIILQEYSEAEQKLVGPVKNIYKGTDIQLTEGPHLY 190
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} Length = 318 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Score = 38.1 bits (87), Expect = 0.002
Identities = 25/191 (13%), Positives = 46/191 (24%), Gaps = 16/191 (8%)
Query: 64 MYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSAT 123
++LF P ++ SKD +NW + A + S
Sbjct: 13 TREGDTWYLFS-TGPGITIY--------SSKDRVNWRYSDRAFATEPTWAKRVSPSFDGH 63
Query: 124 VL------PGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVN 177
+ + Y+ + +P + D V+ P +
Sbjct: 64 LWAPDIYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRD 123
Query: 178 ASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWE 237
P + G M GS + L + H I L + + +
Sbjct: 124 LWNAIAPAI-IADDHGQVWMSFGSFWGGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMD 182
Query: 238 CPDFYPVSISG 248
I
Sbjct: 183 DSQAGSAQIEA 193
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 574 | |||
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 99.91 | |
| d1y4wa1 | 164 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 99.86 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.74 | |
| d1uypa1 | 138 | Beta-fructosidase (invertase), C-terminal domain { | 99.68 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.55 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.37 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.34 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.22 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.21 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.17 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 99.12 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.22 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 97.84 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 97.77 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 97.69 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 97.61 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 97.55 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 97.54 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 97.26 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 96.71 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 91.08 | |
| d2ah2a2 | 399 | Trypanosoma sialidase {Parasitic flagellate protoz | 86.38 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 84.78 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 80.62 |
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.2e-73 Score=580.24 Aligned_cols=281 Identities=35% Similarity=0.711 Sum_probs=248.5
Q ss_pred ccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEE
Q 008189 47 HRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSAT 123 (574)
Q Consensus 47 ~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav 123 (574)
|||+|||+|+.|||| |++|++|+||||||++|+++.||+++||||+|+|||||+++|+||.|+. |.+|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsav 79 (294)
T d1uypa2 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAV 79 (294)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSCSCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEEE
T ss_pred CCccCcccCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCcEEEEEEeCCcCCeEECCccccccc--CCCCeEEEEEE
Confidence 899999999999999 9999999999999999999999999999999999999999999999986 66899999998
Q ss_pred EcCCCeeEEEEeeecC-----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEE
Q 008189 124 VLPGNKPIILYTGVDH-----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRML 198 (574)
Q Consensus 124 ~~~dg~~~l~YTg~~~-----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~ 198 (574)
+ .+|++++|||++.. ...+.|++|.|+|+ ++|+|++.||||..++.....+||||+| |. ++|+|+|+
T Consensus 80 ~-~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~~~~~~~~fRDP~V-~~-~~g~w~M~ 151 (294)
T d1uypa2 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRMV 151 (294)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-ETTEEEEE
T ss_pred e-cCCeEEEEEEEeeCCCCCCcceeeeEEEECCCC-----CceEeecCCceecCCCccCccccCCCcc-cc-cCCEEEEE
Confidence 7 59999999999753 24577888998774 8999999999997665556789999996 55 48999999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCCceeEE
Q 008189 199 VGSRR-KHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLTRYDYY 277 (574)
Q Consensus 199 ~g~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y 277 (574)
+|++. +..|+|.+|+|+||++|++.+. +...+.+.||||||||+|+ + ||||++|......+.|
T Consensus 152 ~g~~~~~~~G~i~ly~S~Dl~~W~~~g~-l~~~~~~~~~ECPdlf~l~--~-------------~~vl~~s~~~~~~~~y 215 (294)
T d1uypa2 152 LGSGKDEKIGRVLLYTSDDLFHWKYEGA-IFEDETTKEIECPDLVRIG--E-------------KDILIYSITSTNSVLF 215 (294)
T ss_dssp EEEEETTTEEEEEEEEESSSSSEEEEEE-EEEETTCSCEEEEEEEEET--T-------------EEEEEEEETTTTEEEE
T ss_pred EEeeecCCccEEEEEEcCCccceeEecc-ceeCCCCCceeeceEEEeC--C-------------eeEEEEEecCCCCeee
Confidence 99876 5679999999999999999874 5555667899999999997 4 9999999988888999
Q ss_pred EEEEEeCCCCccccCCCCCCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCC--CCCCCCCccccccccEEEE
Q 008189 278 TIGTYNRDKDRYVPDKDSVDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDST--FDDMAKGWAGVQTIPREVW 354 (574)
Q Consensus 278 ~vG~~d~~~~~F~~~~~~~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~--~~~~~~gW~g~lslPReL~ 354 (574)
++|++++ ++|.++. .+++|+|+ |||+|||.+ ++||||||||+++.+. .++...+|+|+|||||||+
T Consensus 216 ~~G~~~~--~~f~~~~-------~~~lD~G~dfYA~qtf~~--~~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRel~ 284 (294)
T d1uypa2 216 SMGELKE--GKLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELY 284 (294)
T ss_dssp EEEEEET--TEEEEEE-------EEESCCSSSCEEEEECBS--CSSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEEE
T ss_pred EeeeecC--CeEEeec-------ceEEccCCceeeccCccC--CCCEEEEEECCCCcccccCCCccCCcccceeeCEEEE
Confidence 9999996 5897764 57899999 999999987 4899999999998764 3445679999999999999
Q ss_pred EecCCCeEEEcc
Q 008189 355 LDGSGKQLLQWP 366 (574)
Q Consensus 355 l~~~g~~L~q~P 366 (574)
|+ +| +|+|+|
T Consensus 285 l~-~~-~L~q~P 294 (294)
T d1uypa2 285 VE-NN-ELKVKP 294 (294)
T ss_dssp EE-TT-EEEEEE
T ss_pred EE-CC-EEEecC
Confidence 97 56 799998
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=2e-71 Score=582.82 Aligned_cols=307 Identities=30% Similarity=0.549 Sum_probs=248.6
Q ss_pred ccCcccccceeecCCCcee---eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC-cc-CCCe
Q 008189 43 VKQLHRTAFHFQPPKHWIN---GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP-FD-INGC 117 (574)
Q Consensus 43 ~~~~~RP~~H~~p~~gw~N---g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-~D-~~gv 117 (574)
.+++|||+|||+|+.|||| |++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+.. .| ..||
T Consensus 3 y~~p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~~ 82 (353)
T d1y4wa2 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEMY 82 (353)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBEE
T ss_pred CCCCCcCcEeecCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCeEEEEEEeccccceeECCccccCCccCcCCCCcc
Confidence 4689999999999999999 99999999999999999999999999999999999999999999999853 33 4679
Q ss_pred EeeeEEEcCCC----------eeEEEEeeecC------------CCcceEEEEEecCCCCcccceeecc-CCCceEecC-
Q 008189 118 WSGSATVLPGN----------KPIILYTGVDH------------KERQVQNYAVPANPSDPYLRKWIKP-DNNPVVFPG- 173 (574)
Q Consensus 118 ~SGsav~~~dg----------~~~l~YTg~~~------------~~~~~q~lA~s~D~~d~~l~~w~k~-~~~Pvi~~~- 173 (574)
|||||+++.+| .+++||||+.. ...+.|++|+|.|.+ ++|+|. +.||||..+
T Consensus 83 ~SGsav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~~ 158 (353)
T d1y4wa2 83 FSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPP 158 (353)
T ss_dssp EEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSCC
T ss_pred ccCceEecCCCccccccCCCceEEEEEeeeecccccccCcccccCCcEEEEEEEECCCC----cceEEecCCCeEecCCC
Confidence 99999986443 46889999743 235789999998864 788775 579999644
Q ss_pred CCC--CCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCc
Q 008189 174 PDV--NASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNG 251 (574)
Q Consensus 174 ~~~--~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~ 251 (574)
.+. ...+||||+|+|. +++.|+|++++. ...|+|+||+|+||.+|++.+.+......++||||||||+|++++
T Consensus 159 ~~~~~~~~~fRDP~V~~~-~~~~~~~~~~~~-~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~--- 233 (353)
T d1y4wa2 159 SPYEAEYQNFRDPFVFWH-DESQKWVVVTSI-AELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS--- 233 (353)
T ss_dssp TTCGGGTTSEEEEEEEEE-TTTTEEEEEEEE-GGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT---
T ss_pred CCCcccccccCCCceEEE-CCCCEEEEEEee-cCCCeEEEEecCCCCceEEeccccccCCCCcceeeeEEEEeecCC---
Confidence 332 3468999998777 444444444443 445789999999999999998654444567899999999998654
Q ss_pred cccccCCCCceEEEEEeecC-------CceeEEEEEEEeCCCCccccCCCCC--CCCcceecccCC-CccceeeeeCCCC
Q 008189 252 LDTSFAGGNEKFVLKVSLDL-------TRYDYYTIGTYNRDKDRYVPDKDSV--DGWRGLRYDYGN-FYASKTFFDSRKN 321 (574)
Q Consensus 252 ~~~~~~~~~~k~vl~~s~~~-------~~~~~Y~vG~~d~~~~~F~~~~~~~--d~~~~~~lD~G~-fYA~~t~~~~~~g 321 (574)
+.+.+|||+.+... ...+.|++|+||+ .+|+|+.+.. .....++||+|+ |||+|||.++++|
T Consensus 234 ------~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~g 305 (353)
T d1y4wa2 234 ------GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDG--TTFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLN 305 (353)
T ss_dssp ------SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECS--SCEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCGG
T ss_pred ------CCceEEEEEecccCCCCcccccccceEEEEEecC--ceeeecCCccccCCCccceeecCcCeeECCceeCCCCC
Confidence 23469999887532 3468999999996 4788765421 233467899999 9999999987679
Q ss_pred cEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCC--CeEEEcc
Q 008189 322 RRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGSG--KQLLQWP 366 (574)
Q Consensus 322 r~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g--~~L~q~P 366 (574)
||||||||+++++..+..+.+|+|+|||||||+|+++| .+|+|+|
T Consensus 306 Rri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 306 DHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp GCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEecCCCccCCCCCCCCcceeeEeCEEEEEEECCCCCEEEEcC
Confidence 99999999999887777788999999999999998643 3799998
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=4.7e-24 Score=226.33 Aligned_cols=266 Identities=15% Similarity=0.141 Sum_probs=178.3
Q ss_pred EEECCEEEEEEeeCCCCC---CCCccEEEEeecCCcCCceecccccCCCC--------CccCCCeEeeeEEEcCCCeeEE
Q 008189 64 MYYKGIYHLFYQYNPKGA---VWGNIVWAHSVSKDLINWEALEPALYPSK--------PFDINGCWSGSATVLPGNKPII 132 (574)
Q Consensus 64 ~~~~G~yHlfyq~~P~~~---~~g~~~Wgha~S~Dlv~W~~~~~al~P~~--------~~D~~gv~SGsav~~~dg~~~l 132 (574)
+.++|.+++|++..|... .+....+.|+.|+||.||++.+.++.+.. ..+..+-|||||++..||+++|
T Consensus 65 ~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~~~DG~~~L 144 (440)
T d1oyga_ 65 ANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATFTSDGKIRL 144 (440)
T ss_dssp CCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEECTTSCEEE
T ss_pred EEECCEEEEEEEeCCCCCCCCCeEEEEEeecCCCccCCCEECccccCCCccccccccccCCCCccCccceEEccCCeEEE
Confidence 336899999999876432 22334567888999999999998886542 2334567999999878999999
Q ss_pred EEeeecCC--CcceEE-----EEEecCCCCcccceeeccCCCceEecCCC--C---------------CCcCccCCeeEE
Q 008189 133 LYTGVDHK--ERQVQN-----YAVPANPSDPYLRKWIKPDNNPVVFPGPD--V---------------NASAFRDPTTAW 188 (574)
Q Consensus 133 ~YTg~~~~--~~~~q~-----lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~--~---------------~~~~fRDP~Vvw 188 (574)
||||.... ..|+.. ++.+ +. ...|++...+++|-.+++ + +..+||||+| |
T Consensus 145 fYTg~~~~~~~~q~i~~a~~~~~~d-~~----~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~v-~ 218 (440)
T d1oyga_ 145 FYTDFSGKHYGKQTLTTAQVNVSAS-DS----SLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY-V 218 (440)
T ss_dssp EEEEEEGGGTTEEEEEEEEEEEEEC-SS----CEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEEE-E
T ss_pred EEEeccCCCCCcceEEEEEEEEeec-CC----cceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCce-e
Confidence 99997542 222222 2222 22 367776655555533322 1 2458999996 4
Q ss_pred ecCCCeEEEEEeeecC------------------------------------------CeeEEEEE-EeCCCCCCEEccc
Q 008189 189 WSNDGHWRMLVGSRRK------------------------------------------HRGMAYLY-RSRDFMKWTKAKH 225 (574)
Q Consensus 189 ~~~~g~~~M~~g~~~~------------------------------------------~~G~i~ly-~S~Dl~~W~~~~~ 225 (574)
. .+|+|||++++... ..|.|.++ .|+|+..|+..+.
T Consensus 219 ~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~~We~~~p 297 (440)
T d1oyga_ 219 E-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKP 297 (440)
T ss_dssp E-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSSEEEEEEE
T ss_pred e-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCcccceecCc
Confidence 5 47999999987531 02455555 5999999999875
Q ss_pred ccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC-------Cc----eeEEEEEEEeCCCCccccCCC
Q 008189 226 PIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL-------TR----YDYYTIGTYNRDKDRYVPDKD 294 (574)
Q Consensus 226 ~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~-------~~----~~~Y~vG~~d~~~~~F~~~~~ 294 (574)
++.......+||||++|+++ | ||||+.|... .. ...++||+ ...+.|.|.++
T Consensus 298 Ll~a~~v~d~~ErP~I~~~n--G-------------KYYLFtss~~~~~a~~~~~~~~~~~~g~Vsd--sl~Gpy~PlN~ 360 (440)
T d1oyga_ 298 LIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVSN--SLTGPYKPLNK 360 (440)
T ss_dssp EEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEES--STTCCCEEGGG
T ss_pred ceeccCCCCeEECCEEEEEC--C-------------EEEEEEecccccccCCCcCCCCceEEEEECC--CCCCCCeecCC
Confidence 44444556799999999997 6 9999877421 11 12345563 44567888763
Q ss_pred C-CCCCcceecccCC-CccceeeeeCCCCcEEEEEeccCCCCCCCCCCCCccccccccEEEEEecC
Q 008189 295 S-VDGWRGLRYDYGN-FYASKTFFDSRKNRRILWGWANESDSTFDDMAKGWAGVQTIPREVWLDGS 358 (574)
Q Consensus 295 ~-~d~~~~~~lD~G~-fYA~~t~~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~ 358 (574)
. .........|+++ .|+..++.+....++++.+||.++.... ...|.++-+.+|.|+.+
T Consensus 361 sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~~~~-----~~g~t~APt~~l~l~g~ 421 (440)
T d1oyga_ 361 TGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYA-----DKQSTFAPSFLLNIKGK 421 (440)
T ss_dssp TSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTTSCS-----SCCCEECBCEEEEEETT
T ss_pred CcceeccCCCCCcCcccceeEEecCCCCceEEEEEeecCcCccc-----ccCCccCCcEEEEEcCC
Confidence 2 1111112457788 6999999865556889999999997422 24577888889999744
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=99.86 E-value=3.7e-21 Score=178.04 Aligned_cols=113 Identities=24% Similarity=0.346 Sum_probs=88.1
Q ss_pred ceEEEEEecCCCceeEEEEEEEeeCCCceEEEEeecCCCCCcccCCccccccceEE--EEec-CCCeEEEEEEEeCCeEE
Q 008189 444 PFGLLTLASKNLEEFTPVFFRIFKDGHKHLVLMCSDASSSTLKTEGLYKPSFAGFV--NVDL-SDKKLSLRSLIDHSVVE 520 (574)
Q Consensus 444 ~~gl~i~~~~~~~e~t~i~f~~~~~~~~~~~~~~vDr~~s~~~~~~~~~~~~~~~~--~~~~-~~~~~~LrIfvD~S~vE 520 (574)
.|||.|++++++++.|.|.||... +. +++||++|+.. ...+.++... ++.+ .++.++||||||+|+||
T Consensus 48 ~fgl~lr~s~d~~e~t~i~yd~~~---~~---l~vDRs~sg~~---~~~~~~~~~~~~~~~~~~~~~l~Lri~vD~ssvE 118 (164)
T d1y4wa1 48 TFAIALRASANFTEQTLVGYDFAK---QQ---IFLDRTHSGDV---SFDETFASVYHGPLTPDSTGVVKLSIFVDRSSVE 118 (164)
T ss_dssp EEEEEEEECTTSSSCEEEEEETTT---TE---EEEECTTSSCC---TTCTTTSCEEEEECCCCTTSEEEEEEEEETTEEE
T ss_pred EEEEEEEEcCCCCEEEEEEEECCC---CE---EEEECCCCCCC---cccccccceeEEecccCCCCeEEEEEEEECcEEE
Confidence 699999999999999999998653 32 57899999753 1122222222 2222 36899999999999999
Q ss_pred EEcCCCceEEEEeeecCCCcCCCceEEEEeCCceeEEEeEEeeecCCCC
Q 008189 521 SFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTETVTVEKLNAWSMKKP 569 (574)
Q Consensus 521 vFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~~~i~~l~~w~m~~~ 569 (574)
||+|||+.+||+|+||... ..+|.++++| +.+++.++++|+|++|
T Consensus 119 vF~NdG~~~~T~~~fp~~~---~~~i~~~s~g-g~~~~~~l~v~~lksi 163 (164)
T d1y4wa1 119 VFGGQGETTLTAQIFPSSD---AVHARLASTG-GTTEDVRADIYKIAST 163 (164)
T ss_dssp EEETTTTEEEEEECCCCTT---CCEEEEEEES-SCEEEEEEEEEEBCCC
T ss_pred EEECCCeEEEEEEecCCCC---CCEEEEEEcC-CeEEEEEEEEEecccc
Confidence 9999999999999999765 4566667666 4788999999999987
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.74 E-value=4e-17 Score=167.01 Aligned_cols=160 Identities=16% Similarity=0.222 Sum_probs=118.4
Q ss_pred Ccee-eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecc-cccCCCC---CccCCCeEeeeEEEcCCCeeEE
Q 008189 58 HWIN-GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALE-PALYPSK---PFDINGCWSGSATVLPGNKPII 132 (574)
Q Consensus 58 gw~N-g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~-~al~P~~---~~D~~gv~SGsav~~~dg~~~l 132 (574)
+-.| |+++++|+|||+|+..- ..+.++||+|+|+|++||+..+ +++.|+. .++..||++++++.. +|+++|
T Consensus 44 ~vfNp~~i~~~g~~~ll~r~~~---~~~~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~~-~d~yym 119 (327)
T d1vkda_ 44 RVFNSAVVPYNGEFVGVFRIDH---KNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTYYI 119 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEEEE---TTSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTEEEE
T ss_pred ceeccEEEEECCEEEEEEEecC---CCCceEEEEEEcCCccCCEeCCCCeecCCCCCcccccCcEEcceEEEE-CCEEEE
Confidence 3446 99999999999999742 3467899999999999999764 5677764 356679999999884 899999
Q ss_pred EEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec---CCeeEE
Q 008189 133 LYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR---KHRGMA 209 (574)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~---~~~G~i 209 (574)
+||+.. ...++++|+|+|. ++|+|.. +++. ...+|+.++....+|+|+|+..... ...|.|
T Consensus 120 ~yt~~~--~~~~i~lA~S~D~-----~~w~k~g--~~~~-------~~~kd~~lfpeki~Gky~ml~Rp~~~~~~~~~~I 183 (327)
T d1vkda_ 120 TFCTDD--HGPTIGVGMTKDF-----KTFVRLP--NAYV-------PFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDI 183 (327)
T ss_dssp EEEEES--SSEEEEEEEESSS-----SSEEEEC--CSSS-------SSEEEEEECSSCBTTBEEEEEEECCSSSCSCCCE
T ss_pred EEEecC--CCcEEEEEEecCc-----chheecC--CccC-------ccccCceEeeeeccCeEEEEEeeccCCCcccceE
Confidence 999874 3467899999985 8999963 3322 2357887433335899999975432 234579
Q ss_pred EEEEeCCCCCCEEcccccccCCCCCcccc
Q 008189 210 YLYRSRDFMKWTKAKHPIHSLANTGMWEC 238 (574)
Q Consensus 210 ~ly~S~Dl~~W~~~~~~l~~~~~~~~wEc 238 (574)
.+.+|+||.+|+....++. ....+.||+
T Consensus 184 ~la~S~Dl~~W~~~~~v~~-~~~~~~wd~ 211 (327)
T d1vkda_ 184 FLSESPDMIHWGNHRFVLG-RSSYNWWEN 211 (327)
T ss_dssp EEEEESSSSCBEEEEEEEC-CCSSCGGGS
T ss_pred EEEcCCCcccccccceecc-cCCCCceee
Confidence 9999999999997653332 233445553
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=99.68 E-value=5e-16 Score=139.13 Aligned_cols=77 Identities=19% Similarity=0.211 Sum_probs=54.9
Q ss_pred EeecCCCCCcccCCccccccceEEEEecCCCeEEEEEEEeCCeEEEEcCCCceEEEEeeecCCCcCCCceEEEEeCCcee
Q 008189 476 MCSDASSSTLKTEGLYKPSFAGFVNVDLSDKKLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVFDDAHLYAFNNGTET 555 (574)
Q Consensus 476 ~~vDr~~s~~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEvFvNdG~~~lT~Riyp~~~~~~~~~l~~~~~g~~~ 555 (574)
+++||++++.. .+.. ...++ ..++.++||||||+|+||||+|||+ |||+|+||... ...|.+.++
T Consensus 60 l~~dR~~s~~~-~~~~-----r~~~~-~~~~~~~LrIfvD~SsvEiFiNdg~-v~t~rvfP~~~---~~~i~~~~~---- 124 (138)
T d1uypa1 60 LIVDTTRSGVS-GGEV-----RKSTV-EDEATNRIRAFLDSCSVEFFFNDSI-AFSFRIHPENV---YNILSVKSN---- 124 (138)
T ss_dssp EEEECTTSSTT-CCCE-----EEEEC-CCCSSEEEEEEEETTEEEEEETTTE-EEEEECCCSSC---CCEEEEEEE----
T ss_pred EEEEeeccccC-CCce-----EEEEc-CCCCcEEEEEEEEeeEEEEEECCCE-EEEEEEcCCCC---CcEEEEEec----
Confidence 56799988754 1111 11222 2368899999999999999999996 89999999876 234554432
Q ss_pred EEEeEEeeecCCCC
Q 008189 556 VTVEKLNAWSMKKP 569 (574)
Q Consensus 556 ~~i~~l~~w~m~~~ 569 (574)
..++++|+|+||
T Consensus 125 --~~~~~~~~Lksi 136 (138)
T d1uypa1 125 --QVKLEVFELENI 136 (138)
T ss_dssp --EEEEEEEEECCS
T ss_pred --ccEEEEEEcccc
Confidence 135688999997
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.55 E-value=1.9e-13 Score=136.73 Aligned_cols=187 Identities=17% Similarity=0.126 Sum_probs=124.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCc-------cCCCeEeeeEEEcCCCeeEEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPF-------DINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~-------D~~gv~SGsav~~~dg~~~l~Y 134 (574)
.+++++|+||||+..... ...+.+++|+||+||+.++.++.+...+ ...++|.++++. .+|+++|||
T Consensus 14 ~vi~~~g~YY~~~t~~~~-----~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~yylyy 87 (291)
T d1uv4a1 14 TMIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNGKYWLYY 87 (291)
T ss_dssp EEEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETTEEEEEE
T ss_pred EEEEECCEEEEEEecCCC-----CCcEEEEECCCCCCCEECcccccCCcccccccCCccCCcccceEEEE-ECCEEEEEE
Confidence 578899999999864322 2358889999999999998877654321 135799999987 599999999
Q ss_pred eeecCC-CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE
Q 008189 135 TGVDHK-ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYR 213 (574)
Q Consensus 135 Tg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~ 213 (574)
++.... ....+++|+|++.. .-.|+.. ++++..... .....+||.|+++ ++|++||+++.... .|.+++
T Consensus 88 ~~~~~~~~~~~i~~a~s~~~~---~Gpw~~~--~~~~~~~~~-~~~~~iDp~vf~D-~dG~~Y~~~~~~~~---~i~i~~ 157 (291)
T d1uv4a1 88 SVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELTFD-KDGNPWLAFGSFWS---GIKLTK 157 (291)
T ss_dssp EECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEEEC-TTSCEEEEECBSTT---CEEEEE
T ss_pred EecCCCCCcceEEEEEeCCCC---CCCCCcC--ccccccccC-CCCCccCceEEEe-cCCcEEEEecccCC---ceEEEe
Confidence 987643 45667889987731 1357763 344433222 2246789997665 78999999975432 255555
Q ss_pred e-CCCCCCEEcccc--cc-cCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecCC---ceeEEEEEE
Q 008189 214 S-RDFMKWTKAKHP--IH-SLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDLT---RYDYYTIGT 281 (574)
Q Consensus 214 S-~Dl~~W~~~~~~--l~-~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~---~~~~Y~vG~ 281 (574)
. .|. |...+.+ +. ........|+|.+|+.+ | +++|++|.... ....|.++-
T Consensus 158 l~~~~--~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~Yyl~~S~~~~~~~~~~~y~v~~ 215 (291)
T d1uv4a1 158 LDKST--MKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFDKCCDGVNSTYKIAY 215 (291)
T ss_dssp ECTTT--CSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEECSSSSSCCEEEEEE
T ss_pred ecccc--ccCcCceeEEEecCCCCccccccEEEEEC--C-------------EEEEEEecCcccCCCCCCceeEE
Confidence 3 443 4333332 11 22345689999999987 5 89999986431 234555543
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.37 E-value=7e-12 Score=125.72 Aligned_cols=178 Identities=15% Similarity=0.098 Sum_probs=115.5
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCC-------ccCCCeEeeeEEEcCCCeeEEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKP-------FDINGCWSGSATVLPGNKPIILY 134 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~D~~gv~SGsav~~~dg~~~l~Y 134 (574)
.+++++|+||||... .++...+|+||+||+.++.+|.+... ....++|++.++. .+|+++|||
T Consensus 11 ~v~~~~g~yYl~~t~---------~gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~~~~~y 80 (318)
T d1gyha_ 11 VMTREGDTWYLFSTG---------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKGLFYLYY 80 (318)
T ss_dssp EEEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETTEEEEEE
T ss_pred EEEEECCEEEEEEee---------CCEEEEECCCCCCCeECCccccCCccccccCCCcCCCceECCEEEE-EcCceEEEE
Confidence 467889999998642 13567799999999999988865432 1235799999987 589999999
Q ss_pred eeecCC-CcceEEEEEecCCC-CcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 008189 135 TGVDHK-ERQVQNYAVPANPS-DPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLY 212 (574)
Q Consensus 135 Tg~~~~-~~~~q~lA~s~D~~-d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly 212 (574)
++.... ....+++|++.... +.....|++. .++....+......++||.|++. .+|++||+++..... +.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~iDp~v~~d-~dG~~Yl~~~~~~~~---~~~~ 154 (318)
T d1gyha_ 81 SVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIAD-DHGQVWMSFGSFWGG---LKLF 154 (318)
T ss_dssp EECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEEC-TTSCEEEEECBSTTC---EEEE
T ss_pred EEecCCCcccceeEEEEeccCCCccccccccC--ceecccCCCCCCCceEccceEee-cCCcEEEeccCCCCC---eeeE
Confidence 997653 34566777775321 1112567763 23444444445577899996554 799999998865321 2333
Q ss_pred Ee-CCCC------CCEEccc----ccccC--CCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 213 RS-RDFM------KWTKAKH----PIHSL--ANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 213 ~S-~Dl~------~W~~~~~----~l~~~--~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
.. .|+. .|..... ++... ....++|||.+|+.+ | +++|++|..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~yS~~ 210 (318)
T d1gyha_ 155 KLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp EBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred ecCccceeeccccccccccccccceeeccCCCCCceeecCEEEEEC--C-------------EEEEEEecC
Confidence 32 3322 2222211 11111 124589999999997 5 899999864
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.34 E-value=1.7e-11 Score=123.20 Aligned_cols=176 Identities=18% Similarity=0.177 Sum_probs=115.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC--------CccCCCeEeeeEEEcCCCeeEEE
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK--------PFDINGCWSGSATVLPGNKPIIL 133 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~--------~~D~~gv~SGsav~~~dg~~~l~ 133 (574)
.+++++|+||||... .++..++|+||+||+.++.+|.... ..+..++|++.++. .+|+++||
T Consensus 28 ~i~~~~g~yY~~~t~---------~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~yyl~ 97 (312)
T d1wl7a1 28 VIAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICF-YNGIYYLY 97 (312)
T ss_dssp EEEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-ETTEEEEE
T ss_pred EEEEECCEEEEEEec---------CCceEEEcCCCCCceECcccccCCcccccccCCcccCCceEcceEEE-eCCEEEEE
Confidence 577899999998531 2477899999999999998886432 24567899999987 58999999
Q ss_pred EeeecCC-CcceEEEEEecC--CCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEE
Q 008189 134 YTGVDHK-ERQVQNYAVPAN--PSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAY 210 (574)
Q Consensus 134 YTg~~~~-~~~~q~lA~s~D--~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ 210 (574)
||+.... ....+++|.+.. ..++ ...|++. +|++..... +...++||.+++. ++|++||+++.... .+.
T Consensus 98 ~t~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~--~~~~~~~~~-~~~~~iD~~~f~d-~dG~~y~~~~~~~~---~i~ 169 (312)
T d1wl7a1 98 YSVSTFGKNTSVIGLATNRTLDPRDP-DYEWKDM--GPVIHSTAS-DNYNAIDPNVVFD-QEGQPWLSFGSFWS---GIQ 169 (312)
T ss_dssp EEECCTTCCCEEEEEEEESCSCTTST-TCCCEEE--EEEEEECTT-SSSCCCSCEEEEC-TTSCEEEEECBSTT---CEE
T ss_pred EEeecCCcccceeeEEEEecccCCCC-ccccccc--cceecCCCC-CCCCcCCCceeEc-cCCcEEEeecCCCC---cee
Confidence 9997653 334555665432 2222 2456552 465543322 3357899996554 79999998876432 245
Q ss_pred EEE-eCCCCCCEEccccccc---CCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeec
Q 008189 211 LYR-SRDFMKWTKAKHPIHS---LANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLD 270 (574)
Q Consensus 211 ly~-S~Dl~~W~~~~~~l~~---~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 270 (574)
+++ +.|..........+.. .......|+|.+|+.+ | +++|++|..
T Consensus 170 ~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~--g-------------~yYl~ys~~ 218 (312)
T d1wl7a1 170 LIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (312)
T ss_dssp EEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred EEEEcCcCCcCcCCceEEEecccCCCCCcccccEEEEEC--C-------------cEEEEEecC
Confidence 555 3443322111112211 1234578999999987 5 899999864
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.22 E-value=2.1e-09 Score=107.86 Aligned_cols=174 Identities=16% Similarity=0.072 Sum_probs=111.3
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC------CccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK------PFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~------~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+|+||+...... ..+..++|+||+||+.++.+|.... .....++|.+.++. .+|+++|||+
T Consensus 14 ~v~~~~~~yY~~~tt~~~~-----~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~yylyys 87 (321)
T d1y7ba2 14 SICRADTDYYIATSTFEWF-----PGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSY-HDGKFWLIYT 87 (321)
T ss_dssp EEEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETTEEEEEEE
T ss_pred EEEEECCEEEEEEecCCCC-----CCeEEEECCCccCCEEccccccCCcccccCCCcccCcccCceEEE-ECCEEEEEEE
Confidence 5788999999998643221 1355678999999999987775332 23446799999987 5999999999
Q ss_pred eecCC----CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-----Ce
Q 008189 136 GVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK-----HR 206 (574)
Q Consensus 136 g~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~-----~~ 206 (574)
+.... ..+.+++|++++.. -.|+.. ..+ .....||.+++. .+|+.+|+++.... ..
T Consensus 88 ~~~~~~~~~~~~~~~~a~a~~p~----Gp~~~~---~~~-------~~~~~D~~~~~d-~dg~~~~~~~~~~~~~~~~~~ 152 (321)
T d1y7ba2 88 DVKVTDGMWKDCHNYLTTCESVD----GVWSDP---ITL-------NGSGFDASLFHD-NDGKKYLVNMYWDQRTYNHNF 152 (321)
T ss_dssp EESCCSSSCCCEEEEEEEESSTT----SCCCCC---EEC-------CCSCSCCEEEEC-TTSCEEEEEEEECCCTTSCSE
T ss_pred eeccCCCCccceeeEeeecCCCC----CCcccc---eee-------cccccCCcEEEE-cCCCEEEEEeccCCCccccCc
Confidence 86542 23556788887753 345431 111 124579996544 78888888775431 12
Q ss_pred eEEEE-EEeCCCCCCEEcccccccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 207 GMAYL-YRSRDFMKWTKAKHPIHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 207 G~i~l-y~S~Dl~~W~~~~~~l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
..+.+ ..++|..+.......+.........|.|.+|+-+ | +++|++|...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~yyl~~s~~~ 203 (321)
T d1y7ba2 153 YGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIG--D-------------YYYLFTAEGG 203 (321)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cceeeEeeCCCcceEcCCceEEeeccCCCccccceEEEEC--C-------------EEEEEEcCCC
Confidence 23333 3356654443222223233334567999999976 4 8888887643
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.21 E-value=1.9e-09 Score=108.12 Aligned_cols=172 Identities=16% Similarity=0.149 Sum_probs=109.1
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC------CccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK------PFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~------~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++|+||||+..... ...+..++|+||+||+.++.+|.... ......+|.+.++. .+|++||||+
T Consensus 15 ~vi~~~~~yY~~~tt~~~-----~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~~ylyy~ 88 (317)
T d1yrza2 15 SIVRVGDDYYIATSTFEW-----FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HDGTFYLIYT 88 (317)
T ss_dssp EEEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETTEEEEEEE
T ss_pred EEEEECCEEEEEEccCCC-----CCCeEEEECCCCCCCeECCccccCccccccCCCcccceeecceEEE-ECCEEEEEEE
Confidence 578899999999753211 11355679999999999988875443 23345689999877 5999999999
Q ss_pred eecCC----CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC-----e
Q 008189 136 GVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH-----R 206 (574)
Q Consensus 136 g~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~-----~ 206 (574)
+.... ....+.+|.+.+.. ..|+. |+... ....||.+++ +++|+.||+.+..... .
T Consensus 89 ~~~~~~~~~~~~~~~~~~a~~p~----gp~~~----~~~~~------~~~iDp~~f~-D~dG~~Yl~~~~~~~~~~~~~~ 153 (317)
T d1yrza2 89 DVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYLN------SSGFDPSLFH-DDDGRKWLVNMIWDYRKGNHPF 153 (317)
T ss_dssp EEEECSSSCCEEEEEEEEESSSS----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEECCCTTSCSE
T ss_pred EeccCCCCcccceEEEEecCCCC----CCccc----eeeec------CCccCCcEEE-ecCCCEEEEEeccCcCCCCccc
Confidence 76431 23345567766643 34532 33321 3457999654 4799999988765321 1
Q ss_pred eEEEEEE-eCCCCCCEEcccc--cccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 207 GMAYLYR-SRDFMKWTKAKHP--IHSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 207 G~i~ly~-S~Dl~~W~~~~~~--l~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
..+.+.. +.+ .++..+.+ +.........|.|.+++.+ | +++|++|...
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~yyl~~s~~~ 204 (317)
T d1yrza2 154 AGIILQEYSEA--EQKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGG 204 (317)
T ss_dssp EEEEEEEEETT--TTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cceeeeecCcc--cCeEcCCceEEEeccCCCcccCceEEEEC--C-------------EEEEEEccCC
Confidence 1233333 333 34544432 2222334578999999986 5 8899888754
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.17 E-value=7.6e-11 Score=119.73 Aligned_cols=123 Identities=8% Similarity=0.120 Sum_probs=93.7
Q ss_pred cCCcCCceec-ccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEe
Q 008189 93 SKDLINWEAL-EPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVF 171 (574)
Q Consensus 93 S~Dlv~W~~~-~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~ 171 (574)
|++++ |++. -+.|.|...+...+||-+.|++ .+|+++|+|.+.+..+...+++|+|+|+ +||+|.+ .||+.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~-~~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCc-eecCCCccccCCCCcchhceeccEEEE-ECCEEEEEEEecCCCCceEEEEEEcCCc-----cCCEeCC-CCeec
Confidence 44443 4433 2567877666667899999987 5999999999877777788999999996 8999975 57764
Q ss_pred cCC---CCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccc
Q 008189 172 PGP---DVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHP 226 (574)
Q Consensus 172 ~~~---~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~ 226 (574)
+.. .++...++||.|++. +++|||++.+.. ...++.+++|+|+++|++.+..
T Consensus 93 p~~~~~~~~~~gv~DPrv~~~--~d~yym~yt~~~-~~~~i~lA~S~D~~~w~k~g~~ 147 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDD-HGPTIGVGMTKDFKTFVRLPNA 147 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEEE--TTEEEEEEEEES-SSEEEEEEEESSSSSEEEECCS
T ss_pred CCCCCcccccCcEEcceEEEE--CCEEEEEEEecC-CCcEEEEEEecCcchheecCCc
Confidence 332 245567899997654 689999987764 3456899999999999998743
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=99.12 E-value=1.7e-08 Score=101.38 Aligned_cols=173 Identities=17% Similarity=0.122 Sum_probs=110.4
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCC------CccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSK------PFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~------~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++++++||||+.... +..++..++|+||+||+.++.+|.... ..+..++|.+.+.. .+|+++|||+
T Consensus 15 ~v~~~~~~yY~~~tt~~-----~~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~~-~~G~yylyys 88 (322)
T d2exha2 15 SICRVGDDYYIAVSTFE-----WFPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDGKFWLIYT 88 (322)
T ss_dssp EEEEETTEEEEEECCBT-----EESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETTEEEEEEE
T ss_pred EEEEECCEEEEEEcCCC-----CCCCcEEEECCCcCCcEEcccccccccccccCCCcccCCcccceEEE-ECCEEEEEEE
Confidence 57889999999985321 122356689999999999987764322 23456799999877 5999999999
Q ss_pred eecCC----CcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC---C--e
Q 008189 136 GVDHK----ERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK---H--R 206 (574)
Q Consensus 136 g~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~---~--~ 206 (574)
+.... ......++.+++.. -.|++ |+... ....||.+++. .+|+.||+.+.... . .
T Consensus 89 ~~~~~~~~~~~~~~~~~~sd~~~----gp~~~----~~~~~------~~~~dp~~f~d-~dG~~Yl~~~~~~~~~~~~~~ 153 (322)
T d2exha2 89 DVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFHD-EDGRKYLVNMYWDHRVDHHPF 153 (322)
T ss_dssp EECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEEC-TTSCEEEEEEEECCCTTSCSE
T ss_pred eecccCCCccccceEEEecCCCC----CCccc----ceEec------CCCCCCCeEEE-cCCCEEEEecccCCccCcCCc
Confidence 76532 22344566665542 23432 33321 24579986544 79999998876542 1 1
Q ss_pred eEEEEEEeCCCCCCEEccccc--ccCCCCCccccceeEEeccCCCCccccccCCCCceEEEEEeecC
Q 008189 207 GMAYLYRSRDFMKWTKAKHPI--HSLANTGMWECPDFYPVSISGKNGLDTSFAGGNEKFVLKVSLDL 271 (574)
Q Consensus 207 G~i~ly~S~Dl~~W~~~~~~l--~~~~~~~~wEcPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 271 (574)
..+.+.+ .+...|+..+.+. .........|.|.+++.+ | +++|++|...
T Consensus 154 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~s~~~ 204 (322)
T d2exha2 154 YGIVLQE-YSVEQKKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 204 (322)
T ss_dssp EEEEEEE-EETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cceEEee-ecCcCCeECCCcEEEEEecCCCcccCcEEEEEC--C-------------EEEEEEeCCC
Confidence 1222222 2334566665432 222344578999999986 5 8999988754
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.22 E-value=9.9e-06 Score=79.44 Aligned_cols=145 Identities=14% Similarity=0.179 Sum_probs=89.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCC--ceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLIN--WEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~--W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.+.+++|+|||||.....+. +....++|+|+|... |++.+..+.+....+ .....++++.++||+.||+|.....
T Consensus 75 ~v~~~~g~yylyy~~~~~~~--~~~~i~~a~s~~~~~Gpw~~~~~~~~~~~~~~-~~~iDp~vf~D~dG~~Y~~~~~~~~ 151 (291)
T d1uv4a1 75 DIQYYNGKYWLYYSVSSFGS--NTSAIGLASSTSISSGGWKDEGLVIRSTSSNN-YNAIDPELTFDKDGNPWLAFGSFWS 151 (291)
T ss_dssp EEEEETTEEEEEEEECCTTC--SCEEEEEEEESCTTTTCCEEEEEEEEECTTSS-SCCCSCEEEECTTSCEEEEECBSTT
T ss_pred EEEEECCEEEEEEEecCCCC--CcceEEEEEeCCCCCCCCCcCccccccccCCC-CCccCceEEEecCCcEEEEecccCC
Confidence 47788999999998764432 456789999999765 998765443332222 3345788988888999999975431
Q ss_pred CCcceEEEEEe-cCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecC----C-eeEEEEEE
Q 008189 140 KERQVQNYAVP-ANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRK----H-RGMAYLYR 213 (574)
Q Consensus 140 ~~~~~q~lA~s-~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~----~-~G~i~ly~ 213 (574)
.+.++.. .|. ...... ...+...+. ....+.-|.+ ++ .+|+|||++++..- . .=++.+++
T Consensus 152 ----~i~i~~l~~~~-----~~~~g~-~~~i~~~~~--~~~~~EgP~i-~k-~~g~Yyl~~S~~~~~~~~~~~y~v~~~~ 217 (291)
T d1uv4a1 152 ----GIKLTKLDKST-----MKPTGS-LYSIAARPN--NGGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYKIAYGR 217 (291)
T ss_dssp ----CEEEEEECTTT-----CSEEEE-EEEEECCTT--TTTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEEEEEEE
T ss_pred ----ceEEEeecccc-----ccCcCc-eeEEEecCC--CCccccccEE-EE-ECCEEEEEEecCcccCCCCCCceeEEEE
Confidence 2334433 221 111110 012222221 1234467885 45 58999999987531 1 12578899
Q ss_pred eCCCCC-CEEc
Q 008189 214 SRDFMK-WTKA 223 (574)
Q Consensus 214 S~Dl~~-W~~~ 223 (574)
|+++.. |+..
T Consensus 218 s~~~~GP~~~~ 228 (291)
T d1uv4a1 218 SKSITGPYLDK 228 (291)
T ss_dssp ESSTTCCCBCT
T ss_pred cCCCCCCCccC
Confidence 999865 7543
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=97.84 E-value=4.8e-05 Score=74.57 Aligned_cols=148 Identities=12% Similarity=0.026 Sum_probs=101.2
Q ss_pred ceeecCCC--cee--eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCCcCCceecccccCCCCCccCCCeEeeeEEEcC
Q 008189 51 FHFQPPKH--WIN--GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPALYPSKPFDINGCWSGSATVLP 126 (574)
Q Consensus 51 ~H~~p~~g--w~N--g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~ 126 (574)
.-|.--.| -.| .++.++|+|||+++...+. .|...+.+.+++++..+|+..+.-+ -|+-.+.+...
T Consensus 19 l~F~gv~~~DVyN~~apf~~~Gk~~l~~RvE~rd-~~s~s~v~lf~~~g~~~f~~~~~p~--------~glEDPrvt~i- 88 (310)
T d2b4wa1 19 LTFKGVDGYDVYNCSVPFSYKGKTHIYGRVEKRD-IWAASHVRLFEETGKDEFTAVPELS--------WELEDPYIAKI- 88 (310)
T ss_dssp CEEESCTTCEEESCCCCEEETTEEEEEEEEECTT-CSSCCEEEEEEEEETTEEEECTTCC--------BSCEEEEEEEE-
T ss_pred EEEeccCCcceecCCcEEEECCEEEEEEEEEccC-cceEEEEEEEEecCCcceEECCccc--------ccCCCCCEEeE-
Confidence 34444444 556 5578899999999988644 5567788888999999999765321 37788888874
Q ss_pred CCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEe-cCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC
Q 008189 127 GNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVF-PGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKH 205 (574)
Q Consensus 127 dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~-~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~ 205 (574)
+|++++-||.+.+. ....++|.+.+ +++|.+. .|++. .|+ ..+|=-+ ..-.+|+|.|+.--+...
T Consensus 89 ~g~lv~~~t~~~~~-~~~~~~~~t~~-----~r~~~~~--l~~f~~gp~-----~~Kdi~L-~e~~dGKy~~ftRP~~g~ 154 (310)
T d2b4wa1 89 NNEMIFGGTRVRKN-GNAILSYYGYF-----YRGTPDE--LTYFTRGPG-----CMKDIRV-LQLQDGRLGVFSRPRVGR 154 (310)
T ss_dssp TTEEEEEEEEEC------CCCEEEEE-----EEEETTE--EEEEEECCT-----TCCCCEE-EECTTSCEEEEECCCC--
T ss_pred CCEEEEEEEEecCC-CCcceEEEeee-----eecchhc--CceeecCCC-----ccccEEe-EEeeCCEEEEEEccccCC
Confidence 89999999988653 23445676665 3677653 56663 333 2356543 344799999998766556
Q ss_pred eeEEEEEEeCCCCCCEE
Q 008189 206 RGMAYLYRSRDFMKWTK 222 (574)
Q Consensus 206 ~G~i~ly~S~Dl~~W~~ 222 (574)
.|.|.+..++||.+|+.
T Consensus 155 ~g~Ig~~~~d~l~~~t~ 171 (310)
T d2b4wa1 155 KASIGFVILNSIDELGA 171 (310)
T ss_dssp -CCEEEEEESCGGGCSH
T ss_pred CCeeEEEEeCChhhCCH
Confidence 67899999999999974
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.77 E-value=0.00032 Score=68.71 Aligned_cols=129 Identities=7% Similarity=0.016 Sum_probs=87.9
Q ss_pred eeEEECCEEEEEEeeCC--CCCCCCccEEEEeecCCcCCceec--ccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNP--KGAVWGNIVWAHSVSKDLINWEAL--EPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P--~~~~~g~~~Wgha~S~Dlv~W~~~--~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.++..+|++++||-.+- ...........+|+|+|+.+|+.. .++|.+.......+...+.|.. .+|+++|++.+.
T Consensus 77 sav~~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg~~w~k~~~npvi~~~~~~~~~~fRDP~V~~-~~g~w~M~~g~~ 155 (294)
T d1uypa2 77 SAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVLGSG 155 (294)
T ss_dssp EEEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-ETTEEEEEEEEE
T ss_pred EEEecCCeEEEEEEEeeCCCCCCcceeeeEEEECCCCCceEeecCCceecCCCccCccccCCCcccc-cCCEEEEEEEee
Confidence 56678999999997542 222223456788999999999976 3445443332334467788776 589999998776
Q ss_pred cCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 008189 138 DHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR 203 (574)
Q Consensus 138 ~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~ 203 (574)
...+.....+..|+| |++|+.. +++.....+ ..+.-|- ++. -+++|+|+++...
T Consensus 156 ~~~~~G~i~ly~S~D-----l~~W~~~--g~l~~~~~~---~~~ECPd-lf~-l~~~~vl~~s~~~ 209 (294)
T d1uypa2 156 KDEKIGRVLLYTSDD-----LFHWKYE--GAIFEDETT---KEIECPD-LVR-IGEKDILIYSITS 209 (294)
T ss_dssp ETTTEEEEEEEEESS-----SSSEEEE--EEEEEETTC---SCEEEEE-EEE-ETTEEEEEEEETT
T ss_pred ecCCccEEEEEEcCC-----ccceeEe--ccceeCCCC---Cceeece-EEE-eCCeeEEEEEecC
Confidence 554445667788887 4899874 577654432 3567787 445 5889999987653
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=97.69 E-value=0.00016 Score=71.23 Aligned_cols=79 Identities=19% Similarity=0.258 Sum_probs=52.8
Q ss_pred CCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCC--------CCCccc
Q 008189 166 NNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLA--------NTGMWE 237 (574)
Q Consensus 166 ~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------~~~~wE 237 (574)
.||||. ..+.||.|++. ++.|||+.... +....+.+++|+||.+|+..+..+.... .....-
T Consensus 3 ~NPv~~-------~~~aDP~vi~~--~~~yY~~~tt~-~~~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~W 72 (317)
T d1yrza2 3 QNPILP-------GFHPDPSIVRV--GDDYYIATSTF-EWFPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIW 72 (317)
T ss_dssp ESCSBC-------SSCCSCEEEEE--TTEEEEEECCB-TEESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEEC
T ss_pred cCCCCC-------CCCCCCEEEEE--CCEEEEEEccC-CCCCCeEEEECCCCCCCeECCccccCccccccCCCcccceee
Confidence 488884 24789997654 68899875432 2122367899999999999876543211 112233
Q ss_pred cceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 238 CPDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 238 cPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
.|+++..+ | +|+|.++.
T Consensus 73 AP~v~~~~--G-------------~~ylyy~~ 89 (317)
T d1yrza2 73 APCLSYHD--G-------------TFYLIYTD 89 (317)
T ss_dssp SCEEEEET--T-------------EEEEEEEE
T ss_pred cceEEEEC--C-------------EEEEEEEE
Confidence 59999986 5 78888774
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=97.61 E-value=0.00052 Score=66.86 Aligned_cols=154 Identities=9% Similarity=0.043 Sum_probs=86.9
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeecCC----cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeee
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVSKD----LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGV 137 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S~D----lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 137 (574)
.+++++|+|||||-....+......+.+.+.+.+ ..+|++.+..+......+......++++++.||+.||+|.+.
T Consensus 68 ~v~~~~g~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDp~v~~d~dG~~Yl~~~~~ 147 (318)
T d1gyha_ 68 DIYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWMSFGSF 147 (318)
T ss_dssp EEEEETTEEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEEEECBS
T ss_pred EEEEEcCceEEEEEEecCCCcccceeEEEEeccCCCccccccccCceecccCCCCCCCceEccceEeecCCcEEEeccCC
Confidence 5788999999999987655443445555555533 479998876554333333233456788888889999998764
Q ss_pred cCCCcceEEEEEecCC-C----CcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C----Cee
Q 008189 138 DHKERQVQNYAVPANP-S----DPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-K----HRG 207 (574)
Q Consensus 138 ~~~~~~~q~lA~s~D~-~----d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~----~~G 207 (574)
.. .+.++...+. . ...+....+. ..+++..........+..|++ ++ .+|+|||++++.. . ...
T Consensus 148 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~EgP~i-~k-~~g~yyl~yS~~~~~~~~~~~y 220 (318)
T d1gyha_ 148 WG----GLKLFKLNDDLTRPAEPQEWHSIAKL-ERSVLMDDSQAGSAQIEAPFI-LR-KGDYYYLFASWGLCCRKGDSTY 220 (318)
T ss_dssp TT----CEEEEEBCTTSSSBCSSCCEEEEECC-CCCTTSCTTSCCSCCEEEEEE-EE-ETTEEEEEEEESCCSCGGGCCC
T ss_pred CC----CeeeEecCccceeecccccccccccc-ccceeeccCCCCCceeecCEE-EE-ECCEEEEEEecCCCCCCCcccc
Confidence 32 2223322211 0 0000111111 112222222222345568885 45 5899999988653 1 123
Q ss_pred EEEEEEeCCCC-CCEE
Q 008189 208 MAYLYRSRDFM-KWTK 222 (574)
Q Consensus 208 ~i~ly~S~Dl~-~W~~ 222 (574)
.+.+++|+++. -|+.
T Consensus 221 ~~~~~~s~~~~Gp~~~ 236 (318)
T d1gyha_ 221 HLVVGRSKQVTGPYLD 236 (318)
T ss_dssp EEEEEEESSTTSCCBC
T ss_pred eeeeecccCCCCCccc
Confidence 67788888875 3543
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=97.55 E-value=0.00087 Score=65.41 Aligned_cols=145 Identities=14% Similarity=0.221 Sum_probs=85.0
Q ss_pred eeEEECCEEEEEEeeCCCCCCCCccEEEEeec-----CC-cCCceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEe
Q 008189 62 GPMYYKGIYHLFYQYNPKGAVWGNIVWAHSVS-----KD-LINWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYT 135 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~~~g~~~Wgha~S-----~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YT 135 (574)
.+++.+|+|||||.....+. +....+.+++ ++ ...|++.++.+.+... +......++++.+.||+.+++|.
T Consensus 86 ~v~~~~g~yyl~~t~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~iD~~~f~d~dG~~y~~~~ 162 (312)
T d1wl7a1 86 DICFYNGIYYLYYSVSTFGK--NTSVIGLATNRTLDPRDPDYEWKDMGPVIHSTAS-DNYNAIDPNVVFDQEGQPWLSFG 162 (312)
T ss_dssp EEEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEEC
T ss_pred eEEEeCCEEEEEEEeecCCc--ccceeeEEEEecccCCCCccccccccceecCCCC-CCCCcCCCceeEccCCcEEEeec
Confidence 57889999999999876543 2333444332 22 3567776554443322 22345667888888999999987
Q ss_pred eecCCCcceEEEEEe-cCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEE
Q 008189 136 GVDHKERQVQNYAVP-ANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KHRGMA 209 (574)
Q Consensus 136 g~~~~~~~~q~lA~s-~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~~G~i 209 (574)
+... ...++.. .|. ..... ....+.....+.+...+.-|++ ++ .+|+|||++++.. ....++
T Consensus 163 ~~~~----~i~~~~l~~d~-----~~~~~-~~~~i~~~~~~~~~~~~EgP~v-~k-~~g~yYl~ys~~~~~~~~~~~~~~ 230 (312)
T d1wl7a1 163 SFWS----GIQLIQLDTET-----MKPAA-QAELLTIASRGEEPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGIESTYKI 230 (312)
T ss_dssp BSTT----CEEEEEBCTTT-----CSBCT-TCCCEEEECCSSSSCCEEEEEE-EE-ETTEEEEEEEESCCSSGGGCCCEE
T ss_pred CCCC----ceeEEEEcCcC-----CcCcC-CceEEEecccCCCCCcccccEE-EE-ECCcEEEEEecCCCcCCCCCCceE
Confidence 6432 2333432 222 11111 1233443333333455678995 45 5899999987643 122368
Q ss_pred EEEEeCCCC-CCE
Q 008189 210 YLYRSRDFM-KWT 221 (574)
Q Consensus 210 ~ly~S~Dl~-~W~ 221 (574)
.+++|+++. -|+
T Consensus 231 ~~a~s~~~~GP~~ 243 (312)
T d1wl7a1 231 AVGRSKDITGPYV 243 (312)
T ss_dssp EEEEESSTTCCCB
T ss_pred EEEecCCCCcccc
Confidence 899998876 344
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.54 E-value=0.0014 Score=64.16 Aligned_cols=78 Identities=23% Similarity=0.352 Sum_probs=54.2
Q ss_pred CceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCC--------CCCcccc
Q 008189 167 NPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRRKHRGMAYLYRSRDFMKWTKAKHPIHSLA--------NTGMWEC 238 (574)
Q Consensus 167 ~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------~~~~wEc 238 (574)
||||. ..+-||.|++ .++.|||+..... ....|.+++|+||.+|++.+..+.... .....-.
T Consensus 3 NPv~~-------~~~aDP~v~~--~~~~yY~~~tt~~-~~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WA 72 (321)
T d1y7ba2 3 NPILR-------GFNPDPSICR--ADTDYYIATSTFE-WFPGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWA 72 (321)
T ss_dssp SCSBC-------SSCCSCEEEE--ETTEEEEEECCBT-EESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECS
T ss_pred CCcCC-------CCCCCCEEEE--ECCEEEEEEecCC-CCCCeEEEECCCccCCEEccccccCCcccccCCCcccCcccC
Confidence 78884 2467999764 4889999865432 122377899999999999875442211 1234567
Q ss_pred ceeEEeccCCCCccccccCCCCceEEEEEee
Q 008189 239 PDFYPVSISGKNGLDTSFAGGNEKFVLKVSL 269 (574)
Q Consensus 239 Pdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 269 (574)
|+++..+ | +|+|.++.
T Consensus 73 P~v~~~~--g-------------~yylyys~ 88 (321)
T d1y7ba2 73 PDLSYHD--G-------------KFWLIYTD 88 (321)
T ss_dssp CEEEEET--T-------------EEEEEEEE
T ss_pred ceEEEEC--C-------------EEEEEEEe
Confidence 9999986 5 88888876
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=97.26 E-value=0.0024 Score=62.66 Aligned_cols=145 Identities=12% Similarity=0.139 Sum_probs=80.3
Q ss_pred eeEEECCEEEEEEeeCCCCC-CCCccEEEEeecCCcC-CceecccccCCCCCccCCCeEeeeEEEcCCCeeEEEEeeecC
Q 008189 62 GPMYYKGIYHLFYQYNPKGA-VWGNIVWAHSVSKDLI-NWEALEPALYPSKPFDINGCWSGSATVLPGNKPIILYTGVDH 139 (574)
Q Consensus 62 g~~~~~G~yHlfyq~~P~~~-~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (574)
.+.+++|+|||||....... .+...+-..++|++.. -|++.. .+. .....++++++.||+.||+|.+...
T Consensus 75 ev~~~~G~yylyys~~~~~~~~~~~~~~~~~~sd~~~gp~~~~~-~~~-------~~~~dp~~f~d~dG~~Yl~~~~~~~ 146 (322)
T d2exha2 75 HLSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSDPI-YLN-------SSGFDPSLFHDEDGRKYLVNMYWDH 146 (322)
T ss_dssp EEEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCCCE-ECC-------CSCSCCEEEECTTSCEEEEEEEECC
T ss_pred eEEEECCEEEEEEEeecccCCCccccceEEEecCCCCCCcccce-Eec-------CCCCCCCeEEEcCCCEEEEecccCC
Confidence 67889999999998654332 2333344556665543 565432 221 1124567778889999999887643
Q ss_pred C--CcceEEEEEecCCCCcccceeeccCCCceEe-cCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEEEEEeC
Q 008189 140 K--ERQVQNYAVPANPSDPYLRKWIKPDNNPVVF-PGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-KHRGMAYLYRSR 215 (574)
Q Consensus 140 ~--~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~-~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-~~~G~i~ly~S~ 215 (574)
. ......+...+... ..++.. ..|... ... +...+..|++ ++ .+|+|||+++... ...-++.+++|+
T Consensus 147 ~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~--~~~~~Egp~i-~k-~~g~YYl~~s~~~~~~~y~v~~~rS~ 217 (322)
T d2exha2 147 RVDHHPFYGIVLQEYSV----EQKKLV-GEPKIIFKGT--DLRITEGPHL-YK-INGYYYLLTAEGGTRYNHAATIARST 217 (322)
T ss_dssp CTTSCSEEEEEEEEEET----TTTEEE-EEEEEEECCC--TTCCCEEEEE-EE-ETTEEEEEEEESCSSTTCEEEEEEES
T ss_pred ccCcCCccceEEeeecC----cCCeEC-CCcEEEEEec--CCCcccCcEE-EE-ECCEEEEEEeCCCCCCCceEEEEEeC
Confidence 2 11222333221110 112221 233331 111 2245678985 45 5899999987653 222368899999
Q ss_pred CCC-CCEEc
Q 008189 216 DFM-KWTKA 223 (574)
Q Consensus 216 Dl~-~W~~~ 223 (574)
++. -|+..
T Consensus 218 ~~~GP~~~~ 226 (322)
T d2exha2 218 SLYGPYEVH 226 (322)
T ss_dssp STTCCCEEC
T ss_pred CCCcccccC
Confidence 976 46543
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=96.71 E-value=0.0095 Score=61.11 Aligned_cols=147 Identities=10% Similarity=0.062 Sum_probs=86.3
Q ss_pred ECCEEEEEEeeCCCCCCC-C--ccEEEEe-ecCCcCCce---ecccccCCCCCc----------------cCCCeEeeeE
Q 008189 66 YKGIYHLFYQYNPKGAVW-G--NIVWAHS-VSKDLINWE---ALEPALYPSKPF----------------DINGCWSGSA 122 (574)
Q Consensus 66 ~~G~yHlfyq~~P~~~~~-g--~~~Wgha-~S~Dlv~W~---~~~~al~P~~~~----------------D~~gv~SGsa 122 (574)
.||+++|||......... . ...-+++ .|.+.+.|+ ..++.+.|++.+ +....-.+.+
T Consensus 138 ~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~v 217 (440)
T d1oyga_ 138 SDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY 217 (440)
T ss_dssp TTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEEE
T ss_pred cCCeEEEEEEeccCCCCCcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCce
Confidence 589999999865322111 1 1222333 455556654 445677787532 1223457777
Q ss_pred EEcCCCeeEEEEeeecCC--C---------------------------------------cceEEEEEecCCCCccccee
Q 008189 123 TVLPGNKPIILYTGVDHK--E---------------------------------------RQVQNYAVPANPSDPYLRKW 161 (574)
Q Consensus 123 v~~~dg~~~l~YTg~~~~--~---------------------------------------~~~q~lA~s~D~~d~~l~~w 161 (574)
+. .+|+.||+|.|+... + ...++++...+ ++..|
T Consensus 218 ~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~----D~~~W 292 (440)
T d1oyga_ 218 VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELND----DYTLK 292 (440)
T ss_dssp EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECT----TSSEE
T ss_pred ee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCC----Ccccc
Confidence 66 489999999986531 0 01234454322 14789
Q ss_pred eccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CC---ee-EEEEEEeCCCC-CCEEc
Q 008189 162 IKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSRR-----KH---RG-MAYLYRSRDFM-KWTKA 223 (574)
Q Consensus 162 ~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~~-----~~---~G-~i~ly~S~Dl~-~W~~~ 223 (574)
+.+ .|++..... ...+.-|.|+ + .+|+|||+..++. +. .+ .+..|.|+.+. .|+..
T Consensus 293 e~~--~pLl~a~~v--~d~~ErP~I~-~-~nGKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~Pl 358 (440)
T d1oyga_ 293 KVM--KPLIASNTV--TDEIERANVF-K-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPL 358 (440)
T ss_dssp EEE--EEEEECTTT--CSCCEEEEEE-E-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEEG
T ss_pred eec--CcceeccCC--CCeEECCEEE-E-ECCEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCeec
Confidence 986 588865432 2456789864 4 5899999987653 11 11 45677787775 47543
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=91.08 E-value=0.55 Score=44.14 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=62.6
Q ss_pred CeE-eeeEEEcCCCeeEEEEeeecC----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEec
Q 008189 116 GCW-SGSATVLPGNKPIILYTGVDH----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWS 190 (574)
Q Consensus 116 gv~-SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~ 190 (574)
.+| -++++..+||.++++|.+... .+...+.+..|+|+| ++|... ..|...+.......+.+|.++...
T Consensus 19 ~~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~~~~~~~~~~~~~~v~~~ 92 (356)
T d1w8oa3 19 PNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQTTAPIKGFSDPSYLVDR 92 (356)
T ss_dssp SCEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCBCSSSCBEEEEEEEEECT
T ss_pred EeeEeCEEEEECCCCEEEEEeeeeCCCCCCCCceEEEEEccCCC----CCCCCC--EEeecCCCCCcccccccceEEEeC
Confidence 356 477777779999999977432 234456788999986 899752 222233322233556788866665
Q ss_pred CCCeEEEEEeeecC---------------CeeEEEEEEeCC-CCCCEEcc
Q 008189 191 NDGHWRMLVGSRRK---------------HRGMAYLYRSRD-FMKWTKAK 224 (574)
Q Consensus 191 ~~g~~~M~~g~~~~---------------~~G~i~ly~S~D-l~~W~~~~ 224 (574)
.+|.-++++..... ....+.++.|.| ...|....
T Consensus 93 ~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~ 142 (356)
T d1w8oa3 93 ETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (356)
T ss_dssp TTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CCCeEEEEEeeeccCCcccccccCCCCCCcEEEEEEEecCCccccccccc
Confidence 56765544432210 012467788766 58998754
|
| >d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Trypanosoma sialidase species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]
Probab=86.38 E-value=5.6 Score=38.82 Aligned_cols=83 Identities=12% Similarity=0.126 Sum_probs=46.3
Q ss_pred EEcCCCeeEEEEeeecCCCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 008189 123 TVLPGNKPIILYTGVDHKERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGHWRMLVGSR 202 (574)
Q Consensus 123 v~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~~~M~~g~~ 202 (574)
+...+|++++=..+....+.....+.+|+|.| ++|+.. +++-. .....|.|. . .+|..+|.....
T Consensus 183 i~~~~GrLv~p~~~~~~~~~~~s~~iySdD~G----~TW~~g--~~~~~-------~~~~~~~v~-~-~dG~lll~~R~~ 247 (399)
T d2ah2a2 183 IVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFG--KGRSA-------FGCSEPVAL-E-WEGKLIINTRVD 247 (399)
T ss_dssp EECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEEC--SCCCC-------TTCEEEEEE-E-ETTEEEEEEECT
T ss_pred eeecCccEecceEeecCCCceEEEEEEeCCCC----ceeEec--cccCC-------CCcccccee-c-cCCeEEEEEecC
Confidence 34568887652222222233344567898876 899974 22211 122445543 2 478877765432
Q ss_pred cCCeeEEEEEEeCC-CCCCEEc
Q 008189 203 RKHRGMAYLYRSRD-FMKWTKA 223 (574)
Q Consensus 203 ~~~~G~i~ly~S~D-l~~W~~~ 223 (574)
.|+..+|+|.| +..|+..
T Consensus 248 ---~g~r~v~~S~DgG~TW~~~ 266 (399)
T d2ah2a2 248 ---YRRRLVYESSDMGNTWLEA 266 (399)
T ss_dssp ---TSCCCEEEESSTTSSCEEC
T ss_pred ---CCceeEEEEcCCCcccccc
Confidence 23445677766 5899864
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=84.78 E-value=0.24 Score=47.57 Aligned_cols=93 Identities=10% Similarity=-0.034 Sum_probs=57.3
Q ss_pred CeEeeeEEEcCCCeeEEEEeeecCCCcceEEEEE-ecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecCCCe
Q 008189 116 GCWSGSATVLPGNKPIILYTGVDHKERQVQNYAV-PANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSNDGH 194 (574)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~-s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~~g~ 194 (574)
-||-.+|....+|+++|++--..++......++. +..++ .+|+..+ .|+ ....||+|.+. +|.
T Consensus 28 DVyN~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~----~~f~~~~-~p~---------~glEDPrvt~i--~g~ 91 (310)
T d2b4wa1 28 DVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGK----DEFTAVP-ELS---------WELEDPYIAKI--NNE 91 (310)
T ss_dssp EEESCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEET----TEEEECT-TCC---------BSCEEEEEEEE--TTE
T ss_pred ceecCCcEEEECCEEEEEEEEEccCcceEEEEEEEEecCC----cceEECC-ccc---------ccCCCCCEEeE--CCE
Confidence 3888888543589999999876654433334442 33332 5777653 455 35679997664 688
Q ss_pred EEEEEeeecCCeeEEEEEEeCCCCCCEEcc
Q 008189 195 WRMLVGSRRKHRGMAYLYRSRDFMKWTKAK 224 (574)
Q Consensus 195 ~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~ 224 (574)
|+|-.-......+.+.+|++.|++.|+..+
T Consensus 92 lv~~~t~~~~~~~~~~~~~t~~~r~~~~~l 121 (310)
T d2b4wa1 92 MIFGGTRVRKNGNAILSYYGYFYRGTPDEL 121 (310)
T ss_dssp EEEEEEEEC-----CCCEEEEEEEEETTEE
T ss_pred EEEEEEEecCCCCcceEEEeeeeecchhcC
Confidence 876544433344566788888888886444
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=80.62 E-value=4.6 Score=38.59 Aligned_cols=75 Identities=11% Similarity=0.079 Sum_probs=46.1
Q ss_pred eE-eeeEEEcCCCeeEEEEeeecC----CCcceEEEEEecCCCCcccceeeccCCCceEecCCCCCCcCccCCeeEEecC
Q 008189 117 CW-SGSATVLPGNKPIILYTGVDH----KERQVQNYAVPANPSDPYLRKWIKPDNNPVVFPGPDVNASAFRDPTTAWWSN 191 (574)
Q Consensus 117 v~-SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~fRDP~Vvw~~~ 191 (574)
+| .++.+...+|.+.+++.+... .+.-.+.++.|+|+| ++|.+. ..|...+.......+.||..+....
T Consensus 32 ~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgG----kTWs~~--~~i~~~~~~~~~~~~~~p~~v~~~~ 105 (379)
T d3sila_ 32 YFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGG----KTWNKK--IAIYNDRVNSKLSRVMDPTCIVANI 105 (379)
T ss_dssp EEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSS----SCCEEE--EEECCCCSCTTTCEEEEEEEEEEEE
T ss_pred eEeccEEEEECCCcEEEEEeeEECCCCCCCCceEEEEEecCCc----cCCCCC--EEccCCCCCccccccCCccEEEECC
Confidence 45 577777789999999976432 122334567889986 899863 2232322222235677998666656
Q ss_pred CCeEEE
Q 008189 192 DGHWRM 197 (574)
Q Consensus 192 ~g~~~M 197 (574)
+|.-++
T Consensus 106 ~g~~~~ 111 (379)
T d3sila_ 106 QGRETI 111 (379)
T ss_dssp TTEEEE
T ss_pred CCCEEE
Confidence 665443
|