Citrus Sinensis ID: 008190

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570----
MKSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRNHPSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSRRKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEVSVSIKNHSVDDHWA
cccccccccEEccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEccccccccccEEEEEccccccccEEEEEccccccccEEEEEEEcccccccccccEEEEEcccccccccccccEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHcccccccccccccccccccEEEEEEEEccccEEEEcccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHccccccccccEEEEEEEEEcccHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHcccccEEEEEccccEEEEHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccccccccccccc
ccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccccccEEEEcccccccccEEEEEccccEcccEEEEEEccccHEcEEEEEEEcccccccccccEEEEEcccccccccccccEEEEccccHccccccccccccccccccHccccccHHHHHcccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEccccEEEEEcccEEEEccccccccHcHcccEEEcccccEEEEEcccccccccHHHHHccHHHcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEEEEccccHHHHHHHHHHHHHHccEEEccHHHHHHHHHHHHHHHHHHHHcEcccHEEEcccccEEEcHHHHHHHHHccccccEEEEEEEccccccccccccEEEcHHHcccccccccccccc
mkslkfafplfkmrnwsGGLLIMALAIILVMSYsfmgtqtqtqhrTQTQKQKHKQSANdffrnhpsndsdmkgsqgvKEVKKTQKlfekphiinvqglgdlyslknmlgedsrpllVWGHMRLLlsrsdalpetAQGVKEAAIAWKDLLSVIEEEKaskfsrrkncppfvsnlskslssgrliievpcglvedssitlvgipdgrygsFQIELIgsqlsgesnppiilhynvslpgdnmteepfiiqnswtnelgwgkeercpahgssntlkvDELVLCNEQVLRRSveenqntshptpssdmlanaptpssdmlanasrvgahetsnfpfvdgnpftttIWVGldgfhmtvngrhetslayreklepwsvtgvkVAGGVDLFSAfaeglpvsedfdFIVDVEhlkaplisRKRLVMLIGVFSTGNNFERRMALRRSWmqypavrsgDLAVRFFIGLHKNRQVNFELWKEAqaygdiqimpfvDYYSLISLKTIAICIFGtkilpakyimktdddAFVRIDEVLsnlkekpsngllfglmsydsspqrdkdskwyiSNEVSVSIknhsvddhwa
MKSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFrnhpsndsdmkgsqGVKEVKKtqklfekphiinvqglGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEkaskfsrrkncppfvsnlskslssgRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHgssntlkvdeLVLCNEQVLRRsveenqntshptpssdmlanAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKaplisrkrlVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLsnlkekpsnglLFGLMSYDSSPQRDKDSKWYISNEvsvsiknhsvddhwa
MKSLKFAFPLFKMRNWSGGllimalaiilVMSYSFMGtqtqtqhrtqtqkqkhkqSANDFFRNHPSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSRRKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEVSVSIKNHSVDDHWA
****KFAFPLFKMRNWSGGLLIMALAIILVMSYSFMG************************************************LFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIE***********************LSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVL*******************************************NFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKE***NGLLFGLM*************WYI******************
********PLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQH*********************************************************************PLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLL*******************************RLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGS****ESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCP*******LKVDELVLCNEQVL******************ML*******************HETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKA**ISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHK*******LWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEVSVSIKNHSVDDHWA
MKSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMG********************NDFFRNHPSN*************KKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSRRKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSV**************MLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEVSVSIKNHSVDDHWA
*KSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQH***********SANDF**NH*SN************************IINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASK***RKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSV*******HPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEVSVS***********
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRNHPSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSRRKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEVSVSIKNHSVDDHWA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query574 2.2.26 [Sep-21-2011]
Q9ASW1619 Probable beta-1,3-galacto no no 0.865 0.802 0.506 1e-153
Q8L7F9643 Beta-1,3-galactosyltransf no no 0.918 0.819 0.436 1e-122
Q8GXG6673 Probable beta-1,3-galacto no no 0.700 0.597 0.347 3e-59
Q9LV16681 Probable beta-1,3-galacto no no 0.651 0.549 0.354 5e-59
Q8RX55672 Probable beta-1,3-galacto no no 0.721 0.616 0.344 4e-58
A7XDQ9684 Probable beta-1,3-galacto no no 0.693 0.581 0.331 1e-55
Q9MYM7326 Beta-1,3-galactosyltransf N/A no 0.243 0.429 0.313 5e-11
Q7JK26326 Beta-1,3-galactosyltransf yes no 0.243 0.429 0.313 5e-11
Q7JK25326 Beta-1,3-galactosyltransf N/A no 0.243 0.429 0.313 5e-11
O54904326 Beta-1,3-galactosyltransf yes no 0.243 0.429 0.313 5e-11
>sp|Q9ASW1|B3GTG_ARATH Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 PE=2 SV=1 Back     alignment and function desciption
 Score =  542 bits (1396), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 286/565 (50%), Positives = 368/565 (65%), Gaps = 68/565 (12%)

Query: 4   LKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRN 63
            KF F   +MR+WS G+ IM L +I ++ Y       Q+ H                   
Sbjct: 10  FKFGFTSVRMRDWSVGVSIMVLTLIFIIRYE------QSDH------------------T 45

Query: 64  HPSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGED--SRPLLVWGHM 121
           H  +DS ++G + V E  K      KPH + ++ L  L+S K+  GE+  S  +LVW  M
Sbjct: 46  HTVDDSSIEG-ESVHEPAK------KPHFMTLEDLDYLFSNKSFFGEEEVSNGMLVWSRM 98

Query: 122 RLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSR------RKNCPPFVSNLSK 175
           R  L R DALPETAQG++EA +A K L+  I  EK +  S       R+ CP FV+   K
Sbjct: 99  RPFLERPDALPETAQGIEEATLAMKGLVLEINREKRAYSSGMVSKEIRRICPDFVTAFDK 158

Query: 176 SLSS-GRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSL 234
            LS    +++E+PCGL+EDSSITLVGIPD    SFQI+L+GS LSGE+  PIIL YNV+ 
Sbjct: 159 DLSGLSHVLLELPCGLIEDSSITLVGIPDEHSSSFQIQLVGSGLSGETRRPIILRYNVNF 218

Query: 235 PGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNT 294
                  +P I+QN+WT +LGWG EERC  HGS     VDEL LCN+Q  R   E++ N 
Sbjct: 219 ------SKPSIVQNTWTEKLGWGNEERCQYHGSLKNHLVDELPLCNKQTGRIISEKSSND 272

Query: 295 SHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNG 354
                 S             L+NA         NFPF+ G+PFT  +W GL+GFHMT+NG
Sbjct: 273 DATMELS-------------LSNA---------NFPFLKGSPFTAALWFGLEGFHMTING 310

Query: 355 RHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKR 414
           RHETS AYREKLEPW V+ VKV+GG+ + S  A  LP+ +D   ++  E LKAP +S  R
Sbjct: 311 RHETSFAYREKLEPWLVSAVKVSGGLKILSVLATRLPIPDDHASLIIEEKLKAPSLSGTR 370

Query: 415 LVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAY 474
           + +L+GVFSTGNNF+RRMALRRSWMQY AVRSG +AVRF IGLH N +VN E+W+E++AY
Sbjct: 371 IELLVGVFSTGNNFKRRMALRRSWMQYEAVRSGKVAVRFLIGLHTNEKVNLEMWRESKAY 430

Query: 475 GDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNG 534
           GDIQ MPFVDYY L+SLKT+A+CI GTK++PAKYIMKTDDDAFVRIDE+LS+L+E+PS+ 
Sbjct: 431 GDIQFMPFVDYYGLLSLKTVALCILGTKVIPAKYIMKTDDDAFVRIDELLSSLEERPSSA 490

Query: 535 LLFGLMSYDSSPQRDKDSKWYISNE 559
           LL+GL+S+DSSP R++ SKW+I  E
Sbjct: 491 LLYGLISFDSSPDREQGSKWFIPKE 515
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8L7F9|B3GTF_ARATH Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1 Back     alignment and function description
>sp|Q8GXG6|B3GTH_ARATH Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana GN=B3GALT17 PE=2 SV=2 Back     alignment and function description
>sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2 Back     alignment and function description
>sp|Q8RX55|B3GTI_ARATH Probable beta-1,3-galactosyltransferase 18 OS=Arabidopsis thaliana GN=B3GALT18 PE=2 SV=1 Back     alignment and function description
>sp|A7XDQ9|B3GTK_ARATH Probable beta-1,3-galactosyltransferase 20 OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1 Back     alignment and function description
>sp|Q9MYM7|B3GT1_PONPY Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus GN=B3GALT1 PE=3 SV=1 Back     alignment and function description
>sp|Q7JK26|B3GT1_PANTR Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes GN=B3GALT1 PE=3 SV=1 Back     alignment and function description
>sp|Q7JK25|B3GT1_PANPA Beta-1,3-galactosyltransferase 1 OS=Pan paniscus GN=B3GALT1 PE=3 SV=1 Back     alignment and function description
>sp|O54904|B3GT1_MOUSE Beta-1,3-galactosyltransferase 1 OS=Mus musculus GN=B3galt1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query574
147780146 1116 hypothetical protein VITISV_039050 [Viti 0.909 0.467 0.666 0.0
225432114637 PREDICTED: probable beta-1,3-galactosylt 0.909 0.819 0.666 0.0
255556508661 conserved hypothetical protein [Ricinus 0.932 0.809 0.656 0.0
224112042611 predicted protein [Populus trichocarpa] 0.867 0.815 0.669 0.0
449459774632 PREDICTED: probable beta-1,3-galactosylt 0.911 0.827 0.625 0.0
356564664638 PREDICTED: probable beta-1,3-galactosylt 0.911 0.819 0.612 0.0
145331986559 putative beta-1,3-galactosyltransferase 0.865 0.889 0.506 1e-151
18397574619 putative beta-1,3-galactosyltransferase 0.865 0.802 0.506 1e-151
34597311559 putative beta 1, 3 galactosyltransferase 0.865 0.889 0.502 1e-149
297833406584 galactosyltransferase family protein [Ar 0.820 0.806 0.485 1e-141
>gi|147780146|emb|CAN60055.1| hypothetical protein VITISV_039050 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/558 (66%), Positives = 435/558 (77%), Gaps = 36/558 (6%)

Query: 13  MRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRNHPSNDSDMK 72
           MR W GG+LI+ALA+IL++ Y+ MG + Q            KQ  + FF NHP+N S +K
Sbjct: 1   MRKWYGGVLIIALAVILLLQYTLMGNRPQ------------KQPPHRFFGNHPANTSKLK 48

Query: 73  GSQGVKEVKKTQKL--FEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDA 130
            S  V  VK+ + L   +K H+I+V+GL DLY+L N+  EDS+ LLVW HM  LL RSDA
Sbjct: 49  DSDSVSSVKEKKVLNHRKKAHLIDVEGLDDLYALNNISKEDSKALLVWAHMYPLLCRSDA 108

Query: 131 LPETAQGVKEAAIAWKDLLSVIEEEKASKFS---------RRKNCPPFVSNLSKSLSSGR 181
           LPETAQG+KEA+ AWKDL S IEE+KASKF+           K+CP  VS   K++ S  
Sbjct: 109 LPETAQGIKEASSAWKDLWSAIEEDKASKFNNTQSENGNPEAKDCPFSVSTFDKTVYSSG 168

Query: 182 LIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTE 241
            I+E PCGLVEDSSIT++GIPDGR GSFQ+EL+G QL GE  PPI+LHYNVSLPGD +TE
Sbjct: 169 CILEFPCGLVEDSSITVIGIPDGRNGSFQVELVGLQLPGEREPPILLHYNVSLPGDKLTE 228

Query: 242 EPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSS 301
           EP I+QN+WTNE GWGKEERC AH S+N  KVD LVLCN+ V+R +VEEN N +HP    
Sbjct: 229 EPVIVQNTWTNETGWGKEERCHAHASTNIQKVDGLVLCNQLVVRSTVEENLNMTHP---- 284

Query: 302 DMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLA 361
                    +SDML N S   AH ++NFPF +GNPFT T+WVG +GFHMTVNGRHETS  
Sbjct: 285 ---------NSDMLTNVSSGRAHVSANFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFT 335

Query: 362 YREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGV 421
           YREKLEPW V+GVKVAGG++L SAFA+ LPVSED D  VDVEHLKAP +SRKRLVML+GV
Sbjct: 336 YREKLEPWLVSGVKVAGGLELLSAFAKDLPVSEDLDLAVDVEHLKAPPVSRKRLVMLVGV 395

Query: 422 FSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMP 481
           FSTGNNFERRMALRR+WMQY AVRSGD+AVRFFIGLHKNRQVN ELW+EAQAYGDIQ+MP
Sbjct: 396 FSTGNNFERRMALRRTWMQYEAVRSGDVAVRFFIGLHKNRQVNLELWREAQAYGDIQLMP 455

Query: 482 FVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMS 541
           FVDYYSLISLKTIA CI GTKILPAKY+MKTDDDAFVRIDEVLS+LK KPSNGLL+GL+S
Sbjct: 456 FVDYYSLISLKTIATCIMGTKILPAKYVMKTDDDAFVRIDEVLSSLKGKPSNGLLYGLIS 515

Query: 542 YDSSPQRDKDSKWYISNE 559
           +DS+P RDKDSKW+IS E
Sbjct: 516 FDSAPHRDKDSKWHISAE 533

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225432114|ref|XP_002274418.1| PREDICTED: probable beta-1,3-galactosyltransferase 16 [Vitis vinifera] gi|297736772|emb|CBI25973.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255556508|ref|XP_002519288.1| conserved hypothetical protein [Ricinus communis] gi|223541603|gb|EEF43152.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224112042|ref|XP_002316064.1| predicted protein [Populus trichocarpa] gi|222865104|gb|EEF02235.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449459774|ref|XP_004147621.1| PREDICTED: probable beta-1,3-galactosyltransferase 16-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356564664|ref|XP_003550571.1| PREDICTED: probable beta-1,3-galactosyltransferase 16-like [Glycine max] Back     alignment and taxonomy information
>gi|145331986|ref|NP_001078115.1| putative beta-1,3-galactosyltransferase 16 [Arabidopsis thaliana] gi|332640873|gb|AEE74394.1| putative beta-1,3-galactosyltransferase 16 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18397574|ref|NP_566284.1| putative beta-1,3-galactosyltransferase 16 [Arabidopsis thaliana] gi|75167739|sp|Q9ASW1.1|B3GTG_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 16 gi|13605629|gb|AAK32808.1|AF361640_1 AT3g06440/F24P17_7 [Arabidopsis thaliana] gi|25090104|gb|AAN72229.1| At3g06440/F24P17_7 [Arabidopsis thaliana] gi|332640872|gb|AEE74393.1| putative beta-1,3-galactosyltransferase 16 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|34597311|gb|AAQ77230.1| putative beta 1, 3 galactosyltransferase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297833406|ref|XP_002884585.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330425|gb|EFH60844.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query574
TAIR|locus:2081071619 AT3G06440 [Arabidopsis thalian 0.405 0.376 0.660 7.1e-141
TAIR|locus:2200660643 GALT1 "galactosyltransferase1" 0.813 0.726 0.476 1.9e-113
TAIR|locus:2205774673 AT1G27120 [Arabidopsis thalian 0.700 0.597 0.347 1.7e-59
TAIR|locus:2027290672 AT1G74800 [Arabidopsis thalian 0.719 0.614 0.356 5.9e-57
TAIR|locus:2172219681 AT5G62620 [Arabidopsis thalian 0.689 0.581 0.353 1.6e-56
TAIR|locus:2133094741 GALT2 "AGP galactosyltransfera 0.698 0.541 0.340 1.5e-53
FB|FBgn0031988585 CG8668 [Drosophila melanogaste 0.242 0.237 0.330 1.6e-13
FB|FBgn0031986420 CG8673 [Drosophila melanogaste 0.243 0.333 0.314 4.5e-13
UNIPROTKB|E1C4T5326 B3GALT1 "Uncharacterized prote 0.287 0.506 0.308 7.1e-12
UNIPROTKB|F1N0D5326 B3GALT1 "Uncharacterized prote 0.285 0.503 0.284 1.6e-11
TAIR|locus:2081071 AT3G06440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 869 (311.0 bits), Expect = 7.1e-141, Sum P(3) = 7.1e-141
 Identities = 154/233 (66%), Positives = 195/233 (83%)

Query:   327 SNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAF 386
             +NFPF+ G+PFT  +W GL+GFHMT+NGRHETS AYREKLEPW V+ VKV+GG+ + S  
Sbjct:   283 ANFPFLKGSPFTAALWFGLEGFHMTINGRHETSFAYREKLEPWLVSAVKVSGGLKILSVL 342

Query:   387 AEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRS 446
             A  LP+ +D   ++  E LKAP +S  R+ +L+GVFSTGNNF+RRMALRRSWMQY AVRS
Sbjct:   343 ATRLPIPDDHASLIIEEKLKAPSLSGTRIELLVGVFSTGNNFKRRMALRRSWMQYEAVRS 402

Query:   447 GDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPA 506
             G +AVRF IGLH N +VN E+W+E++AYGDIQ MPFVDYY L+SLKT+A+CI GTK++PA
Sbjct:   403 GKVAVRFLIGLHTNEKVNLEMWRESKAYGDIQFMPFVDYYGLLSLKTVALCILGTKVIPA 462

Query:   507 KYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNE 559
             KYIMKTDDDAFVRIDE+LS+L+E+PS+ LL+GL+S+DSSP R++ SKW+I  E
Sbjct:   463 KYIMKTDDDAFVRIDELLSSLEERPSSALLYGLISFDSSPDREQGSKWFIPKE 515
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0030246 "carbohydrate binding" evidence=IEA
TAIR|locus:2200660 GALT1 "galactosyltransferase1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205774 AT1G27120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027290 AT1G74800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172219 AT5G62620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133094 GALT2 "AGP galactosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0031988 CG8668 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0031986 CG8673 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1C4T5 B3GALT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N0D5 B3GALT1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00019674001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (637 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query574
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 0.0
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 3e-21
pfam00337129 pfam00337, Gal-bind_lectin, Galactoside-binding le 5e-11
cd00070127 cd00070, GLECT, Galectin/galactose-binding lectin 1e-10
smart00908122 smart00908, Gal-bind_lectin, Galactoside-binding l 3e-10
pfam00337129 pfam00337, Gal-bind_lectin, Galactoside-binding le 5e-10
cd00070127 cd00070, GLECT, Galectin/galactose-binding lectin 2e-09
smart00908122 smart00908, Gal-bind_lectin, Galactoside-binding l 4e-08
smart00276128 smart00276, GLECT, Galectin 1e-06
PTZ00210 382 PTZ00210, PTZ00210, UDP-GlcNAc-dependent glycosylt 6e-05
smart00276128 smart00276, GLECT, Galectin 5e-04
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 0.001
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  559 bits (1442), Expect = 0.0
 Identities = 249/566 (43%), Positives = 349/566 (61%), Gaps = 55/566 (9%)

Query: 13  MRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRN--------H 64
           M+ W GG+L+++L ++LV+ Y  +                     + F  N         
Sbjct: 1   MKKWYGGVLVVSLFMLLVLRYVLLKNPI-----------GESYLQSVFPSNTTNPLEWLD 49

Query: 65  PSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLL 124
           P+N   ++  +   +V  T  +              L++ +N+  E+ + LL W H++ L
Sbjct: 50  PTNPPAVQNPENSSQVISTDTIVS-----------SLFATRNISNEEQQSLLTWNHLKHL 98

Query: 125 LSRSDALPETAQGVKEAAIAWKDLLSVIEEEKA-------SKFSRRKNCPPFVS--NLSK 175
           +  +  LP   + +KEA +AW+ L++ +EEEK         + S+ K CP F++  N ++
Sbjct: 99  VDHAQVLPNGVEAIKEAGVAWESLMASVEEEKLGYTNESSLRKSKEKQCPYFLNKMNATE 158

Query: 176 SLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLP 235
              SG   +++PCGL + SSIT++GIPDG  G+F+I+L G  L GE +PPIILHYNV L 
Sbjct: 159 LGDSG-YKLKIPCGLTQGSSITIIGIPDGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLL 217

Query: 236 GDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTS 295
           GD +TE+P I+QN+WT    WG+EERCP+       KVD+L  CN+ V R        + 
Sbjct: 218 GDKITEDPVIVQNTWTAAHDWGEEERCPSPDPDKNKKVDDLDQCNKMVGRDDKRVLSTSL 277

Query: 296 HPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGR 355
           H   S           S M   A++   +    FPF  G     T+ VG +G  MTV+G+
Sbjct: 278 HSNGSR---------RSPMSQEATKARRY----FPFKQGYLSVATLRVGTEGIQMTVDGK 324

Query: 356 HETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKR- 414
           H TS AYRE LEPW V+ V+++G + L S  A GLP SED + ++D+E LK+P +S K+ 
Sbjct: 325 HITSFAYRETLEPWLVSEVRISGDLKLISVLASGLPTSEDSEHVIDLEALKSPPLSPKKP 384

Query: 415 LVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAY 474
           L + IGVFST NNF+RRMA+RR+WMQY AVRSG +AVRFF+GLHKN+ VN ELW EA+ Y
Sbjct: 385 LDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTY 444

Query: 475 GDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKE-KPSN 533
           GDIQ+MPFVDYYSLI+ KT+AICIFGT+++ AKY+MKTDDDAFVR+DEVL++LK    S+
Sbjct: 445 GDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKRTNVSH 504

Query: 534 GLLFGLMSYDSSPQRDKDSKWYISNE 559
           GLL+GL++ DS P R+ DSKWYIS E
Sbjct: 505 GLLYGLINSDSQPHRNPDSKWYISPE 530

Length = 636
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|215865 pfam00337, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|238025 cd00070, GLECT, Galectin/galactose-binding lectin Back     alignment and domain information
>gnl|CDD|214904 smart00908, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|215865 pfam00337, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|238025 cd00070, GLECT, Galectin/galactose-binding lectin Back     alignment and domain information
>gnl|CDD|214904 smart00908, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|214596 smart00276, GLECT, Galectin Back     alignment and domain information
>gnl|CDD|140237 PTZ00210, PTZ00210, UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|214596 smart00276, GLECT, Galectin Back     alignment and domain information
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 574
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
smart00276128 GLECT Galectin. Galectin - galactose-binding lecti 99.98
PF00337133 Gal-bind_lectin: Galactoside-binding lectin; Inter 99.97
cd00070127 GLECT Galectin/galactose-binding lectin. This doma 99.97
KOG3587143 consensus Galectin, galactose-binding lectin [Extr 99.94
PTZ00210 382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 99.94
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 99.91
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 98.86
KOG2246 364 consensus Galactosyltransferases [Carbohydrate tra 98.49
PLN03153 537 hypothetical protein; Provisional 96.13
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-136  Score=1131.11  Aligned_cols=521  Identities=46%  Similarity=0.847  Sum_probs=486.0

Q ss_pred             ccccchhHHHHHHHHHHHHHhhcccccccccccchhhhhhcccccCccccCC--------CCCCCccCCCCCcchhhhcc
Q 008190           13 MRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRNH--------PSNDSDMKGSQGVKEVKKTQ   84 (574)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~   84 (574)
                      ||||+||+||++|||+|+|||+ ++++|.++.++          ..+|+.|+        ++.++++++|      +   
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~------~---   60 (636)
T PLN03133          1 MKKWYGGVLVVSLFMLLVLRYV-LLKNPIGESYL----------QSVFPSNTTNPLEWLDPTNPPAVQNP------E---   60 (636)
T ss_pred             CceeeeeehHHHHHHHHHHHHH-HhcCCCCCCCc----------ccccccccCCchhhcccCCCccccCC------C---
Confidence            9999999999999999999998 99999998877          34677676        4445555555      4   


Q ss_pred             cccCCCeEeeec-CCCCcccCCCCCCCCCccchhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhhccC---
Q 008190           85 KLFEKPHIINVQ-GLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKF---  160 (574)
Q Consensus        85 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~a~~~w~~~~~~~~~~~~~~~---  160 (574)
                         +++++++.+ ++|+||+++|+|+|++++|++|+|||+|++|+++||+|++||+||+.||++|++++++++++..   
T Consensus        61 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~aw~~~~~~~~~~~~~~~~~~  137 (636)
T PLN03133         61 ---NSSQVISTDTIVSSLFATRNISNEEQQSLLTWNHLKHLVDHAQVLPNGVEAIKEAGVAWESLMASVEEEKLGYTNES  137 (636)
T ss_pred             ---ccceeeccccchhhccccccCchhhhhhhhHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence               677888888 9999999999999999999999999999999999999999999999999999999996555322   


Q ss_pred             ----CCCCCCCcceecccccccCC-CeeEeeCCCCCCCcEEEEEEEeCCCCCceEEEeccCCCCCCCCCCeEEEEeeecC
Q 008190          161 ----SRRKNCPPFVSNLSKSLSSG-RLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLP  235 (574)
Q Consensus       161 ----~~~~~cp~~v~~~~~~~~~~-~~~~~lPcGL~~Gs~ItV~G~p~~~~~~F~I~L~~~~~~~~~~~~i~LHfNpRf~  235 (574)
                          .++++||+||+.|+++++++ +|++.|||||.+|++|||+|+|+++++||+|||+|+..+|++++||||||||||+
T Consensus       138 ~~~~~~~~~cp~~~~~~~~~~~~~~~~~~~iP~GL~~Gs~ItI~G~p~~~~~~F~InL~g~~~~g~~~~~iaLHfNpRf~  217 (636)
T PLN03133        138 SLRKSKEKQCPYFLNKMNATELGDSGYKLKIPCGLTQGSSITIIGIPDGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLL  217 (636)
T ss_pred             ccccCCCCCCchhhhhcccccccCCceEEecCCcCCCCCEEEEEEEeCCCCCeEEEEEeecCcCCCCCCCEEEEEcCccC
Confidence                27789999999999999865 5999999999999999999999999999999999998888788999999999999


Q ss_pred             CCCCCCCCEEEEcCccCCCCcccceecCCCCCCCcccchhhhhhhhhhhccccccccCCCCCCCCCccccCCCCCCchhh
Q 008190          236 GDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDML  315 (574)
Q Consensus       236 ~d~~~~~pvIv~NS~~~~~~WG~EeRc~~~~s~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (574)
                      +|+++++|+||||||+.+|+||.||||++|+|.++++||||++||||+|++++++++++++                 ||
T Consensus       218 gd~~t~~~vIV~NT~~~~~~WG~EERc~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~-----------------~~  280 (636)
T PLN03133        218 GDKITEDPVIVQNTWTAAHDWGEEERCPSPDPDKNKKVDDLDQCNKMVGRDDKRVLSTSLH-----------------SN  280 (636)
T ss_pred             CCccccCCEEEeCCCcCCCcccHhhhcCCCCccccccccchhhhhhhhccccccccccccc-----------------cc
Confidence            9998999999999999449999999999999999999999999999999999999998877                 78


Q ss_pred             hcc----cccCCCCCCCCCCCCCCcEEEEEEEcCCeEEEEeCCeeeEEeeccccCCCCceeEEEEeCceeeeeecccCCC
Q 008190          316 ANA----SRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLP  391 (574)
Q Consensus       316 ~~~----~~~~~~~~~~fPF~~G~~F~lti~~g~egf~v~VnG~H~tsF~yR~~l~p~~v~~l~I~GDv~l~sv~~~glP  391 (574)
                      +++    ++++++.+++|||++|++|++||+||.|||||+|||+|+|+|+||++++||.|++|+|+|||+|+||.+.++|
T Consensus       281 ~~~~~~~~~~~~~~~~~fPF~~G~~F~lti~~g~egf~v~VnG~H~tsF~yR~~lep~~V~~l~V~GDv~l~SV~a~~~p  360 (636)
T PLN03133        281 GSRRSPMSQEATKARRYFPFKQGYLSVATLRVGTEGIQMTVDGKHITSFAYRETLEPWLVSEVRISGDLKLISVLASGLP  360 (636)
T ss_pred             ccccccccccccccccCCCCCCCCcEEEEEEecCCEEEEEECCeEEEeeeCCCCCCccceeEEEEeCcEEEEEEEeeCCC
Confidence            886    7888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccChhhhcCCCCC-CCCeeEEEEEeCCcCCHHHHHHHHHHhcCCCCcCCCCeEEEEEeeccCChhhhHHHHHH
Q 008190          392 VSEDFDFIVDVEHLKAPLIS-RKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKE  470 (574)
Q Consensus       392 ~s~~~~~~~~~e~l~~Pp~~-~~~~~LLI~V~Sap~nfeRR~aIReTWg~~~~v~~~~V~v~FvVG~~~n~~~~~~L~eE  470 (574)
                      .+|++++++++|.|++||++ +.+++|+|+|+|+|+||+||+|||+|||+....++..++++||+|.+.++.++..|++|
T Consensus       361 ~~~~~~~~~d~e~lkAppL~~~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~E  440 (636)
T PLN03133        361 TSEDSEHVIDLEALKSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNE  440 (636)
T ss_pred             CCCchhcccchHHhcCCCCCCCCceEEEEEEeCCcccHHHHHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHH
Confidence            99999999999999999988 67799999999999999999999999999776667789999999999999999999999


Q ss_pred             HhhcCCeEEeecccccCchhHHHHHHHHHHhcCCCCcEEEEeCCceeecHHHHHHHhhc-CCCCCeEEEEeeCCCCcccC
Q 008190          471 AQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKE-KPSNGLLFGLMSYDSSPQRD  549 (574)
Q Consensus       471 ae~ygDIL~ldF~DsY~NLTlKTl~~l~wa~~c~~akfVmK~DDDtFVnvd~Ll~~L~~-~~~~~ly~G~v~~~~~PiRd  549 (574)
                      +++||||||+||.|+|+|||+||+++++|+.+|++++||||+|||+|||+++|+++|+. ...+++|+|++..+.+|+|+
T Consensus       441 a~~ygDIIq~dF~DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd  520 (636)
T PLN03133        441 ARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRN  520 (636)
T ss_pred             HHHcCCeEEEeeechhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999987 55678999999999999999


Q ss_pred             CCCCcccchhhhcCCCCCCcccCC
Q 008190          550 KDSKWYISNEVSVSIKNHSVDDHW  573 (574)
Q Consensus       550 p~sKWyVS~eeYP~~t~~~~~~~~  573 (574)
                      +.+|||||+++||...|+++.+|-
T Consensus       521 ~~sKWYVs~~eyp~~~YPpYasG~  544 (636)
T PLN03133        521 PDSKWYISPEEWPEETYPPWAHGP  544 (636)
T ss_pred             CCCCCCCCHHHCCCCCCCCCCCcC
Confidence            999999999999999999999874

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>smart00276 GLECT Galectin Back     alignment and domain information
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements Back     alignment and domain information
>cd00070 GLECT Galectin/galactose-binding lectin Back     alignment and domain information
>KOG3587 consensus Galectin, galactose-binding lectin [Extracellular structures] Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query574
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 2e-11
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 1e-08
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 7e-11
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 2e-06
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 1e-10
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 9e-07
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 4e-10
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 5e-09
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 7e-10
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 9e-09
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 7e-10
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 1e-08
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 8e-10
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 2e-09
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 1e-09
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 9e-08
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 1e-09
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 1e-08
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 7e-06
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 2e-09
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 4e-09
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 3e-09
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 1e-06
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 4e-09
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 3e-07
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 7e-09
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 2e-06
1is3_A135 Congerin II; complex with lactose and MES, sugar b 9e-09
1is3_A135 Congerin II; complex with lactose and MES, sugar b 8e-08
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 9e-09
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 1e-07
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 1e-08
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 8e-08
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 2e-08
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 5e-06
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 2e-08
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 7e-08
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 6e-05
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 1e-07
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 3e-07
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 4e-07
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 8e-07
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155 Back     alignment and structure
 Score = 61.6 bits (149), Expect = 2e-11
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 324 HETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLF 383
              ++FPF  G  F   I+  +  F + VNG H     +R K E  S+  +++ G + L 
Sbjct: 86  RNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFK-ELSSIDTLEINGDIHLL 144

Query: 384 SAFAEGLPVS 393
              +   P S
Sbjct: 145 EVRSWSGPSS 154
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Length = 137 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Length = 137 Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Length = 134 Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Length = 134 Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Length = 154 Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Length = 154 Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Length = 138 Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Length = 138 Back     alignment and structure
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Length = 148 Back     alignment and structure
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Length = 148 Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Length = 138 Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Length = 138 Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Length = 159 Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Length = 159 Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Length = 164 Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Length = 164 Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} PDB: 3nv2_A* 3nv3_A* 3nv4_A* Length = 138 Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} PDB: 3nv2_A* 3nv3_A* 3nv4_A* Length = 138 Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} Length = 135 Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} Length = 135 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Length = 132 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Length = 132 Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Length = 135 Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Length = 135 Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Length = 144 Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Length = 144 Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 164 Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 164 Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Length = 134 Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Length = 134 Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Length = 142 Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Length = 142 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Length = 129 Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Length = 129 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query574
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 100.0
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 100.0
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 100.0
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 100.0
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 100.0
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 100.0
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 100.0
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 100.0
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 100.0
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 100.0
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 100.0
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 100.0
1is3_A135 Congerin II; complex with lactose and MES, sugar b 100.0
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 100.0
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 100.0
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 99.98
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 99.98
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 99.98
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.98
2wkk_A150 Galectin-2; sugar-binding protein, secreted, cell 99.97
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.97
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.97
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.97
1ww7_A160 Galectin; carbohydrate recognition domain,X-RAY cr 99.94
2r0h_A164 CGL3 lectin; galectin-related, sugar binding prote 99.94
4agr_A146 Galectin; sugar binding protein; 2.10A {Cinachyrel 99.93
2j0a_A 280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.42
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.3e-35  Score=278.59  Aligned_cols=138  Identities=25%  Similarity=0.411  Sum_probs=127.4

Q ss_pred             CCCeeEeeCCCCCCCcEEEEEEEeCCCCCceEEEeccCCCCCCCCCCeEEEEeeecCCCCCCCCCEEEEcCccCCCCccc
Q 008190          179 SGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGK  258 (574)
Q Consensus       179 ~~~~~~~lPcGL~~Gs~ItV~G~p~~~~~~F~I~L~~~~~~~~~~~~i~LHfNpRf~~d~~~~~pvIv~NS~~~~~~WG~  258 (574)
                      ..+|...|||||.+|++|+|+|+|..++++|.|||+++.     .++|+|||||||+++      +|||||+.+ |.||.
T Consensus        16 ~vPf~~~ip~gl~~G~~i~I~G~v~~~~~rF~Inl~~g~-----~~dialHfnpRf~~~------~IV~Ns~~~-g~Wg~   83 (155)
T 2yro_A           16 SLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGK-----SKDIALHLNPRLNIK------AFVRNSFLQ-ESWGE   83 (155)
T ss_dssp             CSSEEEECSSCCCTTCEEEEEEEECTTCCCEEEEEEETT-----TTEEEEEEECCSSSC------CCEEEEECS-SCBCC
T ss_pred             ccCEeeecCCCCccCCEEEEEEEECCCCCEEEEEEecCC-----CCCEEEEEEEEcCCC------EEEEEcccC-CEecc
Confidence            347999999999999999999999999999999999953     268999999999975      799999997 89999


Q ss_pred             ceecCCCCCCCcccchhhhhhhhhhhccccccccCCCCCCCCCccccCCCCCCchhhhcccccCCCCCCCCCCCCCCcEE
Q 008190          259 EERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFT  338 (574)
Q Consensus       259 EeRc~~~~s~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~  338 (574)
                      |||+.                                                               ..|||++|++|+
T Consensus        84 EEr~~---------------------------------------------------------------~~fPF~~G~~F~  100 (155)
T 2yro_A           84 EERNI---------------------------------------------------------------TSFPFSPGMYFE  100 (155)
T ss_dssp             CCCCC---------------------------------------------------------------SCCCCCTTSEEE
T ss_pred             ceeeC---------------------------------------------------------------CCccccCCCeEE
Confidence            99994                                                               246999999999


Q ss_pred             EEEEEcCCeEEEEeCCeeeEEeeccc-cCCCCceeEEEEeCceeeeeecccCCCCC
Q 008190          339 TTIWVGLDGFHMTVNGRHETSLAYRE-KLEPWSVTGVKVAGGVDLFSAFAEGLPVS  393 (574)
Q Consensus       339 lti~~g~egf~v~VnG~H~tsF~yR~-~l~p~~v~~l~I~GDv~l~sv~~~glP~s  393 (574)
                      |+|+++.++|+|+|||+|+++|+||. ++  +.|++|.|.|||+|++|.+.++|+|
T Consensus       101 l~I~~~~~~f~V~VNg~~~~~F~hR~~pl--~~I~~l~I~Gdv~l~~V~~~~~~~~  154 (155)
T 2yro_A          101 MIIYCDVREFKVAVNGVHSLEYKHRFKEL--SSIDTLEINGDIHLLEVRSWSGPSS  154 (155)
T ss_dssp             EEEEECSSEEEEEETTEEEEEEECCCSCG--GGCCEEEEEESEEEEEEEEECCCCC
T ss_pred             EEEEEcCCEEEEEECCEEEEEecCcCCCH--HHCcEEEEeCCEEEEEEEEecCCCC
Confidence            99999999999999999999999996 44  6999999999999999999999986
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} SCOP: b.29.1.3 PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3nv2_A* 3nv3_A* 3nv4_A* Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A* Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>1ww7_A Galectin; carbohydrate recognition domain,X-RAY crystallographic analysis, sulfate ION, sugar binding protein; 1.90A {Agrocybe cylindracea} PDB: 1ww4_A* 1ww6_A* 1ww5_A 2zgl_A 2zgm_A* 2zgn_A* 3afk_A* 3m3c_A* 3m3q_A* 2zgk_A 2zgs_A 2zgq_A 2zgr_A 3m3e_A* 2zgo_A* 3m3o_A* 2zgp_A 2zgu_A 2zgt_A Back     alignment and structure
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A* Back     alignment and structure
>4agr_A Galectin; sugar binding protein; 2.10A {Cinachyrella} PDB: 4agg_A 4agv_A Back     alignment and structure
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 574
d1lcla_141 b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein 3e-10
d1lcla_141 b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein 2e-08
d1is3a_134 b.29.1.3 (A:) Congerin II {Conger eel (Conger myri 1e-09
d1is3a_134 b.29.1.3 (A:) Congerin II {Conger eel (Conger myri 1e-06
d1hlca_129 b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo s 1e-09
d2gala_133 b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [Ta 1e-09
d2gala_133 b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [Ta 2e-09
d1w6na_134 b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [Ta 2e-09
d1w6na_134 b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [Ta 1e-07
d2nn8a1137 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo s 2e-09
d2nn8a1137 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo s 2e-08
d1c1la_135 b.29.1.3 (A:) Congerin I {Conger eel (Conger myria 2e-08
d1c1la_135 b.29.1.3 (A:) Congerin I {Conger eel (Conger myria 2e-06
d1a78a_134 b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [Ta 2e-06
d1a78a_134 b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [Ta 0.001
d1qmja_132 b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) 3e-06
d1ulea_150 b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprino 3e-06
d1ulea_150 b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprino 0.002
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Length = 141 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Charcot-Leyden crystal (CLC) protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (136), Expect = 3e-10
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 324 HETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLF 383
            E+ N PF DG  F  +I V  D + + VNG+   +  +R  ++P +V  V+V   + L 
Sbjct: 75  VESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHR--IKPEAVKMVQVWRDISLT 132

Query: 384 S 384
            
Sbjct: 133 K 133
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Length = 141 Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 134 Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 134 Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Length = 129 Back     information, alignment and structure
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 133 Back     information, alignment and structure
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 133 Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 134 Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 134 Back     information, alignment and structure
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Length = 137 Back     information, alignment and structure
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Length = 137 Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 135 Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 135 Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Length = 134 Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Length = 134 Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 132 Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Length = 150 Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Length = 150 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query574
d2gala_133 Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2nn8a1137 Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606] 100.0
d1lcla_141 Charcot-Leyden crystal (CLC) protein {Human (Homo 99.97
d1w6na_134 Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} 99.97
d1is3a_134 Congerin II {Conger eel (Conger myriaster) [TaxId: 99.97
d1qmja_132 Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} 99.97
d1hlca_129 S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId 99.97
d1c1la_135 Congerin I {Conger eel (Conger myriaster) [TaxId: 99.97
d1a78a_134 Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} 99.97
d1ulea_150 Galectin-2 {Inky cap fungus (Coprinopsis cinerea) 99.94
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Galectin-7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-34  Score=260.90  Aligned_cols=131  Identities=28%  Similarity=0.418  Sum_probs=121.2

Q ss_pred             CeeEeeCCCCCCCcEEEEEEEeCCCCCceEEEeccCCCCCCCCCCeEEEEeeecCCCCCCCCCEEEEcCccCCCCcccce
Q 008190          181 RLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEE  260 (574)
Q Consensus       181 ~~~~~lPcGL~~Gs~ItV~G~p~~~~~~F~I~L~~~~~~~~~~~~i~LHfNpRf~~d~~~~~pvIv~NS~~~~~~WG~Ee  260 (574)
                      +|...||+||.+|++|+|.|++..++++|.|||+++.   ++++||+|||||||+++      .||+||+.+ |.||.||
T Consensus         2 Pf~~~lp~gl~~G~~i~i~G~~~~~~~~F~inl~~~~---~~~~di~~Hfn~Rf~~~------~IV~Ns~~~-g~Wg~Ee   71 (133)
T d2gala_           2 PHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGE---EQGSDAALHFNPRLDTS------EVVFNSKEQ-GSWGREE   71 (133)
T ss_dssp             CEEEECTTCCCTTCEEEEEEECCTTCCBEEEEEESSS---STTCCEEEEEEEETTTT------EEEEEEEET-TEECCCE
T ss_pred             CEeeecCCCCCCCCEEEEEEEECCCCCEEEEEEEeCC---CCCCCEEEEEeeEcCCC------EEEEECCcC-CeECCce
Confidence            6889999999999999999999999999999999854   24678999999999865      799999997 8999999


Q ss_pred             ecCCCCCCCcccchhhhhhhhhhhccccccccCCCCCCCCCccccCCCCCCchhhhcccccCCCCCCCCCCCCCCcEEEE
Q 008190          261 RCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTT  340 (574)
Q Consensus       261 Rc~~~~s~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~lt  340 (574)
                      |+.                                                                +|||++|++|+|+
T Consensus        72 r~~----------------------------------------------------------------~~Pf~~G~~F~l~   87 (133)
T d2gala_          72 RGP----------------------------------------------------------------GVPFQRGQPFEVL   87 (133)
T ss_dssp             ECS----------------------------------------------------------------SCCCCTTCEEEEE
T ss_pred             EEC----------------------------------------------------------------CCCCCCCCeeEEE
Confidence            983                                                                7999999999999


Q ss_pred             EEEcCCeEEEEeCCeeeEEeeccccCCCCceeEEEEeCceeeeeecc
Q 008190          341 IWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFA  387 (574)
Q Consensus       341 i~~g~egf~v~VnG~H~tsF~yR~~l~p~~v~~l~I~GDv~l~sv~~  387 (574)
                      |.++.++|+|+|||+|+++|+||.++  +.|++|.|.||++|++|+.
T Consensus        88 I~~~~~~f~V~vng~~~~~F~~R~p~--~~i~~l~i~Gdv~l~~V~i  132 (133)
T d2gala_          88 IIASDDGFKAVVGDAQYHHFRHRLPL--ARVRLVEVGGDVQLDSVRI  132 (133)
T ss_dssp             EEECSSEEEEEETTEEEEEEECSSCG--GGCCEEEEEESCEEEEEEE
T ss_pred             EEECCCEEEEEECCeeEEEecCcCCh--hhccEEEEECCEEEEEEEE
Confidence            99999999999999999999999765  5999999999999999974
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Back     information, alignment and structure